BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018604
(353 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 193/340 (56%), Gaps = 17/340 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK +A++K +DFGLS E G + ++ G+A+Y+APEVLR+
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+Y ++ D+WS GVILYILLCG PPF TD+ I + + KG+ F W +S AK+LV
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 240
Query: 128 RRMLTQDPKKRITAAQVLEHPWLKE--SGEASD--KPIDTAVLFRMKQFMAMNXXXXXXX 183
+ MLT +P KRI+A + L HPW+ + S + +D K T L MK+F +
Sbjct: 241 KLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAM 300
Query: 184 XVIVENLPT-EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKL----GSTLREVDVKQ-- 236
+ L T EE ++L Q F ++D + G L EL G KL G T+ ++D Q
Sbjct: 301 LFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIE 360
Query: 237 -----YMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELE 291
+Q+ D D NG I+Y EF+T M + L E L AFQ FD D IT +EL
Sbjct: 361 AEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELG 420
Query: 292 TAFKEYNMGDDATIKEIMSEVDRDKDGRISYDEFCAMMKR 331
F + DD T +++ E D++ DG + ++EF MM++
Sbjct: 421 RLFGVTEV-DDETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 196/337 (58%), Gaps = 14/337 (4%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK+++A++K +DFGLS E K+ ++ G+A+Y+APEVLR+
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK 212
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+Y ++ D+WS GVIL+ILL G PPF TD+ I ++ KG+ F W +S AK+L+
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI 272
Query: 128 RRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLF----RMKQFMAMNXXXXXXX 183
++ML D ++RI+A Q LEHPW+KE + I+ L M++F
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAAL 332
Query: 184 XVIVENLPT-EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKL-GSTLREVDVKQ----- 236
+ L + EE ++L F +D + G L EL G +KL G + D+ Q
Sbjct: 333 LYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEV 392
Query: 237 --YMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAF 294
+ AAD D NG IDY EF+T M R L + L+ AFQ FD+D + I+VDEL + F
Sbjct: 393 DAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF 452
Query: 295 KEYNMGDDATIKEIMSEVDRDKDGRISYDEFCAMMKR 331
++ + T KE++S +D + DG + ++EFC M+++
Sbjct: 453 GLDHL-ESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 488
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 195/347 (56%), Gaps = 28/347 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK+++ +K IDFGLS ++ + +D G+A+Y+APEVLR
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
Y ++ D+WSAGVILYILL G PPF+ + I + + G+ F + W IS AK+L+
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 128 RRMLTQDPKKRITAAQVLEHPWLK----ESGEASDKPIDTAVLFRMKQFMAMNXXXXXXX 183
R+MLT P RITA Q LEHPW++ E+ SD P + + ++QF A
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAAL 317
Query: 184 XVIVENLPT-EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKL---------------GS 227
+ L T +E ++L + F ++DT+ G L DEL G + GS
Sbjct: 318 LYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGS 377
Query: 228 TLREVDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITV 287
T+ E + M D+DG+G+I+Y EFI + + R L E +++AF+ FDKD I+
Sbjct: 378 TI-EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKIST 436
Query: 288 DELETAFKEYNMGDDAT----IKEIMSEVDRDKDGRISYDEFCAMMK 330
EL FK ++ D + ++ I+ +VD +KDG + ++EF M++
Sbjct: 437 KEL---FKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 227 bits (578), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 187/338 (55%), Gaps = 18/338 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK ++A ++ IDFGLS E K+ +D G+A+Y+APEVL
Sbjct: 166 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 225
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
Y ++ D+WS GVILYILL G PPF + I +++ KG+ F++ W +S SAK+L+
Sbjct: 226 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 285
Query: 128 RRMLTQDPKKRITAAQVLEHPWL----KESGEASDKPIDTAVLFRMKQFMAMNXXXXXXX 183
R+MLT P RI+A L+H W+ KE +D A+L ++QF
Sbjct: 286 RKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAIL-NIRQFQGTQKLAQAAL 344
Query: 184 XVIVENLPTE-EIQKLKQKFTEMDTDKSGTLSYDELKAGL-----------AKLGSTLRE 231
+ L ++ E ++L F +MD + G L EL G + L ++ E
Sbjct: 345 LYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVE 404
Query: 232 VDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELE 291
+V Q + A D D NG I+Y EF+T M R L E L++AF+ FD DN I+ EL
Sbjct: 405 HEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELA 464
Query: 292 TAFKEYNMGDDATIKEIMSEVDRDKDGRISYDEFCAMM 329
T F ++ D T K ++SEVD++ DG + +DEF M+
Sbjct: 465 TIFGVSDV-DSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 227 bits (578), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 187/338 (55%), Gaps = 18/338 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK ++A ++ IDFGLS E K+ +D G+A+Y+APEVL
Sbjct: 167 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 226
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
Y ++ D+WS GVILYILL G PPF + I +++ KG+ F++ W +S SAK+L+
Sbjct: 227 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 286
Query: 128 RRMLTQDPKKRITAAQVLEHPWL----KESGEASDKPIDTAVLFRMKQFMAMNXXXXXXX 183
R+MLT P RI+A L+H W+ KE +D A+L ++QF
Sbjct: 287 RKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAIL-NIRQFQGTQKLAQAAL 345
Query: 184 XVIVENLPTE-EIQKLKQKFTEMDTDKSGTLSYDELKAGL-----------AKLGSTLRE 231
+ L ++ E ++L F +MD + G L EL G + L ++ E
Sbjct: 346 LYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVE 405
Query: 232 VDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELE 291
+V Q + A D D NG I+Y EF+T M R L E L++AF+ FD DN I+ EL
Sbjct: 406 HEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELA 465
Query: 292 TAFKEYNMGDDATIKEIMSEVDRDKDGRISYDEFCAMM 329
T F ++ D T K ++SEVD++ DG + +DEF M+
Sbjct: 466 TIFGVSDV-DSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 187/338 (55%), Gaps = 18/338 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK ++A ++ IDFGLS E K+ +D G+A+Y+APEVL
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 202
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
Y ++ D+WS GVILYILL G PPF + I +++ KG+ F++ W +S SAK+L+
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 262
Query: 128 RRMLTQDPKKRITAAQVLEHPWL----KESGEASDKPIDTAVLFRMKQFMAMNXXXXXXX 183
R+MLT P RI+A L+H W+ KE +D A+L ++QF
Sbjct: 263 RKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAIL-NIRQFQGTQKLAQAAL 321
Query: 184 XVIVENLPTE-EIQKLKQKFTEMDTDKSGTLSYDELKAGL-----------AKLGSTLRE 231
+ L ++ E ++L F +MD + G L EL G + L ++ E
Sbjct: 322 LYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVE 381
Query: 232 VDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELE 291
+V Q + A D D NG I+Y EF+T M R L E L++AF+ FD DN I+ EL
Sbjct: 382 HEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELA 441
Query: 292 TAFKEYNMGDDATIKEIMSEVDRDKDGRISYDEFCAMM 329
T F ++ D T K ++SEVD++ DG + +DEF M+
Sbjct: 442 TIFGVSDV-DSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 218 bits (554), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 187/352 (53%), Gaps = 19/352 (5%)
Query: 3 VANVC--HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ +C H ++HRD+KPEN L +K+ +K +DFGLS F + + RD G+A+Y+
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 61 APEVLRRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVIS 120
APEVL+++Y ++ D+WS GVI+YILLCG PPF D+ I +++ KG+ F + W IS
Sbjct: 216 APEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNIS 275
Query: 121 SSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG---EASDKPIDTAVLFRMKQFMAMNX 177
AKEL++ MLT D KR TA + L W+K+ SD+ L M++F
Sbjct: 276 DEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQK 335
Query: 178 XXXXXXXVIVENLPT-EEIQKLKQKFTEMDTDKSGTLSYDELKAG----------LAKLG 226
I L T EE ++L F ++D + G L EL G L +L
Sbjct: 336 LAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELK 395
Query: 227 STLREVDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYIT 286
+ EVD ++ D D NG I+Y EFI+ M + L E L +AF FD D IT
Sbjct: 396 NVEEEVD--NILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKIT 453
Query: 287 VDELETAFKEYNMGDDATIKEIMSEVDRDKDGRISYDEFCAMMKRGTQRRGF 338
+EL F ++ + T +++ E D++KD I +DEF +MM + + F
Sbjct: 454 KEELANLFGLTSIS-EKTWNDVLGEADQNKDNMIDFDEFVSMMHKICDHKTF 504
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 181/334 (54%), Gaps = 18/334 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK ++A ++ IDFGLS E K+ +D G+A+Y+APEVL
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG 202
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
Y ++ D+WS GVILYILL G PPF + I +++ KG+ F++ W +S SAK+L+
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 262
Query: 128 RRMLTQDPKKRITAAQVLEHPWL----KESGEASDKPIDTAVLFRMKQFMAMNXXXXXXX 183
R+ LT P RI+A L+H W+ KE +D A+L ++QF
Sbjct: 263 RKXLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAIL-NIRQFQGTQKLAQAAL 321
Query: 184 XVIVENLPTE-EIQKLKQKFTEMDTDKSGTLSYDELKAGL-----------AKLGSTLRE 231
L ++ E ++L F + D + G L EL G + L ++ E
Sbjct: 322 LYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVE 381
Query: 232 VDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELE 291
+V Q + A D D NG I+Y EF+T R L E L++AF+ FD DN I+ EL
Sbjct: 382 HEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELA 441
Query: 292 TAFKEYNMGDDATIKEIMSEVDRDKDGRISYDEF 325
T F ++ D T K ++SEVD++ DG + +DEF
Sbjct: 442 TIFGVSDV-DSETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 99/143 (69%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK +A++K +DFGLS E G + ++ G+A+Y+APEVLR+
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 197
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+Y ++ D+WS GVILYILLCG PPF TD+ I + + KG+ F W +S AK+LV
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 257
Query: 128 RRMLTQDPKKRITAAQVLEHPWL 150
+ MLT +P KRI+A + L HPW+
Sbjct: 258 KLMLTYEPSKRISAEEALNHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 98/145 (67%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK+++ +K IDFGLS ++ + +D G+A+Y+APEVLR
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
Y ++ D+WSAGVILYILL G PPF+ + I + + G+ F + W IS AK+L+
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 128 RRMLTQDPKKRITAAQVLEHPWLKE 152
R+MLT P RITA Q LEHPW+++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 98/145 (67%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK+++ +K IDFGLS ++ + +D G+A+Y+APEVLR
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
Y ++ D+WSAGVILYILL G PPF+ + I + + G+ F + W IS AK+L+
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 128 RRMLTQDPKKRITAAQVLEHPWLKE 152
R+MLT P RITA Q LEHPW+++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 101/159 (63%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH V HRDLKPENFLF + ++ LK IDFGL+ + GK R G+ +YV
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 192
Query: 61 APEVLRRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVIS 120
+P+VL YG E D WSAGV++Y+LLCG PPF A TD + +IR+G F W +S
Sbjct: 193 SPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS 252
Query: 121 SSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDK 159
A+ L+RR+LT+ PK+RIT+ Q LEH W ++ +S +
Sbjct: 253 PQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 291
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 101/159 (63%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH V HRDLKPENFLF + ++ LK IDFGL+ + GK R G+ +YV
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 175
Query: 61 APEVLRRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVIS 120
+P+VL YG E D WSAGV++Y+LLCG PPF A TD + +IR+G F W +S
Sbjct: 176 SPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS 235
Query: 121 SSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDK 159
A+ L+RR+LT+ PK+RIT+ Q LEH W ++ +S +
Sbjct: 236 PQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 274
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 170 KQFMAMNXXXXXXXXVIVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTL 229
KQF A N VI E+L EEI LK+ F +D DKSG ++++ELKAGL ++G+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 230 REVDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDE 289
+E ++ QAAD+D +GTIDY EFI AT+ +K+ER +HL AF YFDKD YIT DE
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 290 LETAFKEYNMGDDATIKEIMSEVDRDKDGRISYDEFCAMMKRGT 333
L+ A +E+ + +D I+E+ +VD+D DGRI Y+EF A ++G+
Sbjct: 121 LQQACEEFGV-EDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 99/146 (67%), Gaps = 2/146 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
CH GV+HRDLKPEN L SK + A +K DFGL++ +E E + + G+ Y++PEVL
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 196
Query: 66 RR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ YGK D+W+ GVILYILL G PPFW + ++++I+ G DF W ++ AK
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 256
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWL 150
+L+ +MLT +P KRITAA+ L+HPW+
Sbjct: 257 DLINKMLTINPSKRITAAEALKHPWI 282
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
E L EEI LK+ F +DTD SGT+++DELK GL ++GS L E ++K M AADID +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 247 GTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDATIK 306
GTIDY EFI AT+ +KLER E+L AF YFDKD YIT+DE++ A K++ + DD I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL-DDIHID 119
Query: 307 EIMSEVDRDKDGRISYDEFCAMMKRGTQRRGFASRSLAHVVTMR 350
+++ E+D+D DG+I Y EF AMM++ G R++ + +R
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR 163
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H G++HRDLKPEN L+ S DE++ + DFGLS + G CG+ YVAPEVL +
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 68 R-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ Y K D WS GVI YILLCG PPF+ + D +FE+I K E +F W IS SAK+
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFRMKQFMA 174
+R ++ +DP+KR T Q L+HPW+ A DK I +V ++K+ A
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFA 299
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H G++HRDLKPEN L+ S DE++ + DFGLS + G CG+ YVAPEVL +
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 68 R-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ Y K D WS GVI YILLCG PPF+ + D +FE+I K E +F W IS SAK+
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFRMKQFMA 174
+R ++ +DP+KR T Q L+HPW+ A DK I +V ++K+ A
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFA 299
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 100/148 (67%), Gaps = 2/148 (1%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPE 63
N CH G++HRDLKPEN L SK + A +K DFGL++ ++ + + + G+ Y++PE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 64 VLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
VLR+ YGK D+W+ GVILYILL G PPFW + ++++I+ G DF W ++
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
AK+L+ +MLT +P KRITA++ L+HPW+
Sbjct: 237 AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H G++HRDLKPEN L+ S DE++ + DFGLS + G CG+ YVAPEVL +
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 68 R-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ Y K D WS GVI YILLCG PPF+ + D +FE+I K E +F W IS SAK+
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFRMKQFMA 174
+R ++ +DP+KR T Q L+HPW+ A DK I +V ++K+ A
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFA 299
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 99/146 (67%), Gaps = 2/146 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
CH GV+HR+LKPEN L SK + A +K DFGL++ +E E + + G+ Y++PEVL
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 66 RR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ YGK D+W+ GVILYILL G PPFW + ++++I+ G DF W ++ AK
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWL 150
+L+ +MLT +P KRITAA+ L+HPW+
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 100/148 (67%), Gaps = 2/148 (1%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPE 63
N CH G++HRDLKPEN L SK + A +K DFGL++ ++ + + + G+ Y++PE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 64 VLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
VLR+ YGK D+W+ GVILYILL G PPFW + ++++I+ G DF W ++
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
AK+L+ +MLT +P KRITA++ L+HPW+
Sbjct: 237 AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 99/159 (62%), Gaps = 2/159 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H G++HRDLKPEN L+ S DE++ + DFGLS + G CG+ YVAPEVL +
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 68 R-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ Y K D WS GVI YILLCG PPF+ + D +FE+I K E +F W IS SAK+
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAV 165
+R ++ +DP+KR T Q L+HPW+ A DK I +V
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSV 290
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 96/144 (66%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++HRDLKPEN L SK ++A ++ IDFGLS E K+ +D G+A+Y+APEVL
Sbjct: 149 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 208
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
Y ++ D+WS GVILYILL G PPF + I +++ KG+ F++ W +S SAK+L+
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 268
Query: 128 RRMLTQDPKKRITAAQVLEHPWLK 151
R+MLT P RI+A L+H W++
Sbjct: 269 RKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 97/146 (66%), Gaps = 2/146 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
CH GV+HRDLKPEN L SK + A +K DFGL++ ++ + + + G+ Y++PEVL
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ YGK DIW+ GVILYILL G PPFW + ++++I+ G DF W ++ AK
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWL 150
L+ +MLT +P KRITA + L+HPW+
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHS G++HR+LKPEN L SK + A +K DFGL++ + + + + G+ Y++PEVL+
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 203
Query: 67 R-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K DIW+ GVILYILL G PPFW + ++ +I+ G D+ W ++ AK
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 263
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWL 150
L+ MLT +PKKRITA Q L+ PW+
Sbjct: 264 LIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H G++HRDLKPEN L+ S+DE + + DFGLS +G CG+ YVAPEVL +
Sbjct: 137 HRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 68 R-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ Y K D WS GVI YILLCG PPF+ + D +FE+I K E +F W IS SAK+
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDF 256
Query: 127 VRRMLTQDPKKRITAAQVLEHPWL 150
+R ++ +DP KR T Q HPW+
Sbjct: 257 IRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHS G++HR+LKPEN L SK + A +K DFGL++ + + + + G+ Y++PEVL+
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 67 R-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K DIW+ GVILYILL G PPFW + ++ +I+ G D+ W ++ AK
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWL 150
L+ MLT +PKKRITA Q L+ PW+
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHS G++HR+LKPEN L SK + A +K DFGL++ + + + + G+ Y++PEVL+
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 179
Query: 67 R-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K DIW+ GVILYILL G PPFW + ++ +I+ G D+ W ++ AK
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 239
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWL 150
L+ MLT +PKKRITA Q L+ PW+
Sbjct: 240 LIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHS G++HR+LKPEN L SK + A +K DFGL++ + + + + G+ Y++PEVL+
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 67 R-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K DIW+ GVILYILL G PPFW + ++ +I+ G D+ W ++ AK
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWL 150
L+ MLT +PKKRITA Q L+ PW+
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 10/174 (5%)
Query: 2 TVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDVCGSAFY 59
T HS + HRD+KPEN L+TSK+++AVLK DFG F +E + + C + +Y
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCYTPYY 176
Query: 60 VAPEVL-RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----GIFEEIRKGEIDFQID 114
VAPEVL +Y K D+WS GVI+YILLCG PPF+++T + G+ IR G+ F
Sbjct: 177 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 236
Query: 115 PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
W +S AK+L+R +L DP +R+T Q + HPW+ +S P+ TA + +
Sbjct: 237 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQ 290
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 10/174 (5%)
Query: 2 TVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDVCGSAFY 59
T HS + HRD+KPEN L+TSK+++AVLK DFG F +E + + C + +Y
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCYTPYY 195
Query: 60 VAPEVL-RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----GIFEEIRKGEIDFQID 114
VAPEVL +Y K D+WS GVI+YILLCG PPF+++T + G+ IR G+ F
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255
Query: 115 PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
W +S AK+L+R +L DP +R+T Q + HPW+ +S P+ TA + +
Sbjct: 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQ 309
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 96/148 (64%), Gaps = 2/148 (1%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPE 63
N H ++HRDLKPEN L SK + A +K DFGL++ ++ E + + G+ Y++PE
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE 203
Query: 64 VLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
VLR+ YGK DIW+ GVILYILL G PPFW + ++++I+ G DF W ++
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPE 263
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
AK L+ +MLT +P KRITA Q L+HPW+
Sbjct: 264 AKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ H G++HRDLKPEN L+ + +EN+ + DFGLS +E+ CG+ YV
Sbjct: 116 LSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYV 174
Query: 61 APEVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI 119
APEVL ++ Y K D WS GVI YILLCG PPF+ +T+ +FE+I++G +F+ W I
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI 234
Query: 120 SSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
S SAK+ + +L +DP +R T + L HPW+
Sbjct: 235 SESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + + C + +YVAPEVL
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGP 191
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 251
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 252 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 297
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 184 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 243
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 244 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 303
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 304 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 349
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 4/153 (2%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H G++HRDLKPEN L+ + +A LK DFGLS +E + VCG+ Y APE+LR
Sbjct: 165 HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG 224
Query: 68 -RYGKEADIWSAGVILYILLCGVPPFWAD-TDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG E D+WS G+I YILLCG PF+ + D+ +F I E F W +S +AK+
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKD 284
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
LVR+++ DPKKR+T Q L+HPW+ +G+A++
Sbjct: 285 LVRKLIVLDPKKRLTTFQALQHPWV--TGKAAN 315
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 237
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 238 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 297
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 298 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 343
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 139 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 198
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 199 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 258
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 259 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 304
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 193
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 253
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 254 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 299
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 191
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 251
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 252 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 297
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 133 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 192
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 193 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 252
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 253 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 298
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 138 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 197
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 198 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 257
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 258 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 303
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 193
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 253
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 254 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 299
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 140 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 200 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 259
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 260 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 305
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 148 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 207
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 208 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 267
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 268 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 313
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 94/148 (63%), Gaps = 3/148 (2%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPEVL 65
CH ++HRD+KPEN L SK+ +A +K DFG+++ + E G G+ ++APEV+
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
+R YGK D+W GVIL+ILL G PF+ T E +FE I KG+ W IS SAK
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+LVRRML DP +RIT + L HPWLKE
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 5/166 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
HS + HRD+KPEN L+TSK NA+LK DFG + C + +YVAPEVL
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 237
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSS 122
+Y K D WS GVI YILLCG PPF+++ G IR G+ +F W +S
Sbjct: 238 EKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEE 297
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R T + HPW+ +S + P+ T+ + +
Sbjct: 298 VKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTSRVLK 343
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 94/158 (59%), Gaps = 10/158 (6%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + H+ ++HRDLKPEN L D+N ++ DFG S +E G++ R++CG+ Y+
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYL 266
Query: 61 APEVLRRR-------YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI 113
APE+L+ YGKE D+W+ GVIL+ LL G PPFW + I +G+ F
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
W SS+ K+L+ R+L DP+ R+TA Q L+HP+ +
Sbjct: 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 91/148 (61%), Gaps = 3/148 (2%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPEVL 65
CH ++HRD+KP L SK+ +A +K FG+++ + E G G+ ++APEV+
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
+R YGK D+W GVIL+ILL G PF+ T E +FE I KG+ W IS SAK
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAK 266
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+LVRRML DP +RIT + L HPWLKE
Sbjct: 267 DLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 91/148 (61%), Gaps = 3/148 (2%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPEVL 65
CH ++HRD+KP L SK+ +A +K FG+++ + E G G+ ++APEV+
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
+R YGK D+W GVIL+ILL G PF+ T E +FE I KG+ W IS SAK
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+LVRRML DP +RIT + L HPWLKE
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
H G++HRDLKPEN L +S++E+ ++K DFG S + E R +CG+ Y+APEVL
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWAD-TDEGIFEEIRKGEIDFQIDPWPVISSS 122
Y + D WS GVIL+I L G PPF T + ++I G+ +F + W +S
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
A +LV+++L DPK R T + L HPWL++
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
H G++HRDLKPEN L +S++E+ ++K DFG S + E R +CG+ Y+APEVL
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWAD-TDEGIFEEIRKGEIDFQIDPWPVISSS 122
Y + D WS GVIL+I L G PPF T + ++I G+ +F + W +S
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
A +LV+++L DPK R T + L HPWL++
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
H G++HRDLKPEN L +S++E+ ++K DFG S + E R +CG+ Y+APEVL
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWAD-TDEGIFEEIRKGEIDFQIDPWPVISSS 122
Y + D WS GVIL+I L G PPF T + ++I G+ +F + W +S
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 250
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
A +LV+++L DPK R T + L HPWL++
Sbjct: 251 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
H G++HRDLKPEN L +S++E+ ++K DFG S + E R +CG+ Y+APEVL
Sbjct: 130 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 189
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWAD-TDEGIFEEIRKGEIDFQIDPWPVISSS 122
Y + D WS GVIL+I L G PPF T + ++I G+ +F + W +S
Sbjct: 190 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 249
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
A +LV+++L DPK R T + L HPWL++
Sbjct: 250 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
H G++HRDLKPEN L +S++E+ ++K DFG S + E R +CG+ Y+APEVL
Sbjct: 137 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 196
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWAD-TDEGIFEEIRKGEIDFQIDPWPVISSS 122
Y + D WS GVIL+I L G PPF T + ++I G+ +F + W +S
Sbjct: 197 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 256
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
A +LV+++L DPK R T + L HPWL++
Sbjct: 257 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HSK + H DLKPEN + K+ N +K IDFG++ IE G EF+++ G+ +VAPE++
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF +T + I DF + + S AK
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 243
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPK+R+T AQ LEH W+K
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
H G++HRDLKPEN L +S++E+ ++K DFG S + E R +CG+ Y+APEVL
Sbjct: 270 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 329
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWAD-TDEGIFEEIRKGEIDFQIDPWPVISSS 122
Y + D WS GVIL+I L G PPF T + ++I G+ +F + W +S
Sbjct: 330 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 389
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
A +LV+++L DPK R T + L HPWL++
Sbjct: 390 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
H G++HRDLKPEN L +S++E+ ++K DFG S + E R +CG+ Y+APEVL
Sbjct: 256 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 315
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWAD-TDEGIFEEIRKGEIDFQIDPWPVISSS 122
Y + D WS GVIL+I L G PPF T + ++I G+ +F + W +S
Sbjct: 316 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 375
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
A +LV+++L DPK R T + L HPWL++
Sbjct: 376 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HSK + H DLKPEN + K+ N +K IDFG++ IE G EF+++ G+ +VAPE++
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF +T + I DF + + S AK
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 264
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPK+R+ AQ LEH W+K
Sbjct: 265 DFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HSK + H DLKPEN + K+ N +K IDFG++ IE G EF+++ G+ +VAPE++
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 190
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF +T + I DF + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 250
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPK+R+ AQ LEH W+K
Sbjct: 251 DFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 31/190 (16%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE--------EGKEFRDVCGSAFY 59
H+KG+ HRDLKPEN L ++ + +K DFGL I+ E CGSA Y
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 60 VAPEVLR------RRYGKEADIWSAGVILYILLCGVPPFW--ADTDEG------------ 99
+APEV+ Y K D+WS GVILYILL G PPF +D G
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 100 -IFEEIRKGEIDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
+FE I++G+ +F W IS +AK+L+ ++L +D K+R++AAQVL+HPW++ G A +
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPE 305
Query: 159 KPIDTAVLFR 168
+ T ++ +
Sbjct: 306 NTLPTPMVLQ 315
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 10/159 (6%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ V H ++HRDLKPEN L D++ +K DFG S ++ G++ R+VCG+ Y+
Sbjct: 134 LEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 190
Query: 61 APEVL-------RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI 113
APE++ YGKE D+WS GVI+Y LL G PPFW + I G F
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W S + K+LV R L P+KR TA + L HP+ ++
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS+ V+H+DLKPEN LF ++ +K IDFGL+ + + + G+A Y+APEV +R
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR 200
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ DIWSAGV++Y LL G PF + E + ++ E ++ ++ P ++ A +L+
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLL 259
Query: 128 RRMLTQDPKKRITAAQVLEHPWLKES 153
++MLT+DP++R +AAQVL H W K++
Sbjct: 260 KQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 10/159 (6%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ V H ++HRDLKPEN L D++ +K DFG S ++ G++ R+VCG+ Y+
Sbjct: 121 LEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 177
Query: 61 APEVL-------RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI 113
APE++ YGKE D+WS GVI+Y LL G PPFW + I G F
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 237
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W S + K+LV R L P+KR TA + L HP+ ++
Sbjct: 238 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ V H ++HRDLKPEN L D++ +K DFG S ++ G++ R VCG+ Y+
Sbjct: 134 LEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYL 190
Query: 61 APEVL-------RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI 113
APE++ YGKE D+WS GVI+Y LL G PPFW + I G F
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W S + K+LV R L P+KR TA + L HP+ ++
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENA-VLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
HS+GV+HRDLKP N L+ + N L+ DFG + + E C +A +VAPEVL
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFW---ADTDEGIFEEIRKGEIDFQIDPWPVISS 121
+R+ Y + DIWS G++LY +L G PF +DT E I I G+ W +S
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+AK+LV +ML DP +R+TA QVL+HPW+ +
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 102/181 (56%), Gaps = 31/181 (17%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK--------EFRDVCGSAFY 59
H+KG+ HRDLKPEN L S ++ + +K DF L ++ E CGSA Y
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 60 VAPEVLR------RRYGKEADIWSAGVILYILLCGVPPFWADT------DEG-------- 99
+APEV+ Y K D+WS GV+LYI+L G PPF D G
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 247
Query: 100 -IFEEIRKGEIDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
+FE I++G+ +F W ISS AK+L+ ++L +D K+R++AAQVL+HPW++ G+A +
Sbjct: 248 KLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GQAPE 305
Query: 159 K 159
K
Sbjct: 306 K 306
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENA-VLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
HS+GV+HRDLKP N L+ + N L+ DFG + + E C +A +VAPEVL
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFW---ADTDEGIFEEIRKGEIDFQIDPWPVISS 121
+R+ Y + DIWS G++LY +L G PF +DT E I I G+ W +S
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+AK+LV +ML DP +R+TA QVL+HPW+ +
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 94/149 (63%), Gaps = 11/149 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF--RDVCGSAFYVAPEVL 65
HS+G HRDLKPEN LF DE LK IDFGL + K++ + CGS Y APE++
Sbjct: 125 HSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 66 RRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ + G EAD+WS G++LY+L+CG PF D ++++I +G+ D + W +S S+
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYD--VPKW--LSPSS 237
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+++ML DPKKRI+ +L HPW+ +
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 31/190 (16%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE--------EGKEFRDVCGSAFY 59
H+KG+ HRDLKPEN L ++ + +K DF L I+ E CGSA Y
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 60 VAPEVLR------RRYGKEADIWSAGVILYILLCGVPPFW--ADTDEG------------ 99
+APEV+ Y K D+WS GVILYILL G PPF +D G
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 100 -IFEEIRKGEIDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
+FE I++G+ +F W IS +AK+L+ ++L +D K+R++AAQVL+HPW++ G A +
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPE 305
Query: 159 KPIDTAVLFR 168
+ T ++ +
Sbjct: 306 NTLPTPMVLQ 315
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWL--KESGEASDKPIDTAVLFRMKQFMA 174
+ +RR+L +DPKKR+T L+HPW+ K++ +A + + + K+F A
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAA 301
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 24/165 (14%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS + HRD+KPEN L+TSK NA+LK DFG A E
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------------------AKETTGE 173
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWAD----TDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+Y K D+WS GVI+YILLCG PPF+++ G+ IR G+ +F W +S
Sbjct: 174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFR 168
K L+R +L +P +R+T + + HPW+ +S + P+ T+ + +
Sbjct: 234 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 278
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 7 CHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
HS + H DLKPEN + ++ +K IDFGL+ I+ G EF+++ G+ +VAPE++
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
G EAD+WS GVI YILL G PF DT + + +F+ + + S+ AK
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +RR+L +DPKKR+T L+HPW+K
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 10/162 (6%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAP 62
N H+K + H DLKPEN + K+ +K IDFGL+ IE+G EF+++ G+ +VAP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 63 EVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISS 121
E++ G EAD+WS GVI YILL G PF DT + I DF + + S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDT 163
AK+ +R++L ++ +KR+T + L HPW+ P+DT
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDT 281
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAP 62
N H+K + H DLKPEN + K+ +K IDFGL+ IE+G EF+++ G+ +VAP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 63 EVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISS 121
E++ G EAD+WS GVI YILL G PF DT + I DF + + S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWL 150
AK+ +R++L ++ +KR+T + L HPW+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAP 62
N H+K + H DLKPEN + K+ +K IDFGL+ IE+G EF+++ G+ +VAP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 63 EVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISS 121
E++ G EAD+WS GVI YILL G PF DT + I DF + + S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWL 150
AK+ +R++L ++ +KR+T + L HPW+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAP 62
N H+K + H DLKPEN + K+ +K IDFGL+ IE+G EF+++ G+ +VAP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 63 EVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISS 121
E++ G EAD+WS GVI YILL G PF DT + I DF + + S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWL 150
AK+ +R++L ++ +KR+T + L HPW+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAP 62
N H+K + H DLKPEN + K+ +K IDFGL+ IE+G EF+++ G+ +VAP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 63 EVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISS 121
E++ G EAD+WS GVI YILL G PF DT + I DF + + S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWL 150
AK+ +R++L ++ +KR+T + L HPW+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKD-ENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAP 62
N H+K + H DLKPEN + K+ +K IDFGL+ IE+G EF+++ G+ +VAP
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 63 EVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISS 121
E++ G EAD+WS GVI YILL G PF DT + I DF + + S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWL 150
AK+ +R++L ++ +KR+T + L HPW+
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ + CH V+HRDLKPEN L D + K DFGLS + +G+ RD CGS Y
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYA 177
Query: 61 APEVLRRRY--GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APEV+ R G E DIWS GVILY LLCG PF + +F++IR G F I +
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV--FYIPEY-- 233
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
++ S L+ ML DP KR T + EH W K+
Sbjct: 234 LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 9/165 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVF-IEEGKEFRDVCGSAFYVAPEVLR 66
H GV+HRDLKPEN LFT +++N +K IDFG + + + + C + Y APE+L
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLN 182
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWAD-------TDEGIFEEIRKGEIDFQIDPWPV 118
+ Y + D+WS GVILY +L G PF + + I ++I+KG+ F+ + W
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDT 163
+S AK+L++ +LT DP KR+ + + + WL++ + S P+ T
Sbjct: 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMT 287
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENA-VLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
H++GV+HRDLKP N L+ + N ++ DFG + + E C +A +VAPEVL
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 192
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWA---DTDEGIFEEIRKGEIDFQIDPWPVISS 121
R+ Y DIWS GV+LY +L G PF DT E I I G+ W +S
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD 252
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWL 150
+AK+LV +ML DP +R+TAA VL HPW+
Sbjct: 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ + CH V+HRDLKPEN L D + K DFGLS + +G+ R CGS Y
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
Query: 61 APEVLRRRY--GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APEV+ R G E DIWS GVILY LLCG PF + +F++IR G F I +
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV--FYIPEY-- 233
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
++ S L+ ML DP KR T + EH W K+
Sbjct: 234 LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 14/158 (8%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPE 63
+ CHSK V+HRD+KPEN L S N LK DFG SV + RD +CG+ Y+ PE
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSVHAPSSR--RDTLCGTLDYLPPE 180
Query: 64 VLR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
++ R + ++ D+WS GV+ Y L G+PPF A T + + I + E F ++
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEG 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
A++L+ R+L + +R+T A+VLEHPW+K + S KP
Sbjct: 237 ARDLISRLLKHNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S N LK DFG SV + +CG+ Y+ PE+
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 181
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G+PPF A T + + I + E F ++ A
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGA 237
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L + +R+T A+VLEHPW+K + S KP
Sbjct: 238 RDLISRLLKHNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ + CH V+HRDLKPEN L D + K DFGLS + +G+ R CGS Y
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYA 182
Query: 61 APEVLRRRY--GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APEV+ R G E DIWS+GVILY LLCG PF D +F++I G F +
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQY-- 238
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
++ S L++ ML DP KR T + EH W K+
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENA-VLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
H++GV+HRDLKP N L+ + N ++ DFG + + E C +A +VAPEVL
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL 192
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWA---DTDEGIFEEIRKGEIDFQIDPWPVISS 121
R+ Y DIWS GV+LY L G PF DT E I I G+ W +S
Sbjct: 193 ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD 252
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWL 150
+AK+LV + L DP +R+TAA VL HPW+
Sbjct: 253 TAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR- 66
H +H DLKPEN +FT+K N LK IDFGL+ ++ + + G+A + APEV
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 224
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ G D+WS GV+ YILL G+ PF + D+ ++ + + + IS K+
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 284
Query: 127 VRRMLTQDPKKRITAAQVLEHPWL 150
+R++L DP R+T Q LEHPWL
Sbjct: 285 IRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR- 66
H +H DLKPEN +FT+K N LK IDFGL+ ++ + + G+A + APEV
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 330
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ G D+WS GV+ YILL G+ PF + D+ ++ + + + IS K+
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390
Query: 127 VRRMLTQDPKKRITAAQVLEHPWL 150
+R++L DP R+T Q LEHPWL
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWL 414
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + D+CG+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TDLCGTLDYLPPEM 177
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + D+CG+ Y+ PE+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TDLCGTLDYLPPEM 182
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 238
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH ++HRDLKPEN L D+N +K DFGLS + +G + CGS Y APEV+
Sbjct: 124 CHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN 180
Query: 67 RRY--GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
+ G E D+WS G++LY++L G PF DE I +K + P +S A+
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPF---DDEFIPNLFKKVNSCVYVMP-DFLSPGAQ 236
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPW--------LKESGEASDKPIDTAVLFRMKQFMAMN 176
L+RRM+ DP +RIT ++ PW L+ E D+ ++ ++ + M +
Sbjct: 237 SLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFS 296
Query: 177 XXXXXXXXVIVENLPTEEIQKLKQKFTEMDTDK 209
IVE L ++E ++K+ + + ++
Sbjct: 297 EDY------IVEALRSDENNEVKEAYNLLHENQ 323
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + D+CG+ Y+ PE+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TDLCGTLDYLPPEM 178
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 234
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 268
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + D+CG+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TDLCGTLDYLPPEM 177
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 9/169 (5%)
Query: 3 VANVC------HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGS 56
V VC HS + H D++PEN ++ ++ ++ +K I+FG + ++ G FR + +
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTA 166
Query: 57 AFYVAPEVLRRRYGKEA-DIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP 115
Y APEV + A D+WS G ++Y+LL G+ PF A+T++ I E I E F +
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA 226
Query: 116 WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE-ASDKPIDT 163
+ IS A + V R+L ++ K R+TA++ L+HPWLK+ E S K I T
Sbjct: 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRT 275
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 89/155 (57%), Gaps = 12/155 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHSK V+HRD+KPEN L S E LK DFG SV + D+CG+ Y+ PE++
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-DDLCGTLDYLPPEMIE 205
Query: 67 -RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A++
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 261
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 293
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + D+CG+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-DDLCGTLDYLPPEM 180
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 236
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + ++CG+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TELCGTLDYLPPEM 177
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE++
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE 196
Query: 67 -RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A++
Sbjct: 197 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 252
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPID 162
L+ R+L +P +R +VLEHPW+ + S KP +
Sbjct: 253 LISRLLKHNPSQRPMLREVLEHPWITAN---SSKPSN 286
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 91/158 (57%), Gaps = 14/158 (8%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPE 63
+ CHSK V+HRD+KPEN L S E LK DFG SV + RD +CG+ Y+ PE
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR--RDTLCGTLDYLPPE 177
Query: 64 VLR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
++ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEG 233
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
A++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 180
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 236
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH ++HRDLKPEN L DE+ +K DFGLS + +G + CGS Y
Sbjct: 123 ISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 179
Query: 61 APEVLRRRY--GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APEV+ + G E D+WS GVILY++LC PF ++ +F+ I G
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KF 235
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
+S A L++RML +P RI+ ++++ W K
Sbjct: 236 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 182
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 238
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 182
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 238
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH ++HRDLKPEN L DE+ +K DFGLS + +G + CGS Y
Sbjct: 122 ISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 178
Query: 61 APEVLRRRY--GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APEV+ + G E D+WS GVILY++LC PF ++ +F+ I G
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KF 234
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
+S A L++RML +P RI+ ++++ W K
Sbjct: 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-XXLCGTLDYLPPEM 179
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 235
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 236 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-AALCGTLDYLPPEM 177
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP----DFVTEGA 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 177
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH ++HRDLKPEN L DE+ +K DFGLS + +G + CGS Y
Sbjct: 117 ISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 173
Query: 61 APEVLRRRY--GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APEV+ + G E D+WS GVILY++LC PF ++ +F+ I G
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KF 229
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
+S A L++RML +P RI+ ++++ W K
Sbjct: 230 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 176
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 232
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 233 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 266
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 181
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 237
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 238 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 271
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH ++HRDLKPEN L DE+ +K DFGLS + +G + CGS Y
Sbjct: 113 ISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 169
Query: 61 APEVLRRRY--GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APEV+ + G E D+WS GVILY++LC PF ++ +F+ I G
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KF 225
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
+S A L++RML +P RI+ ++++ W K
Sbjct: 226 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE++
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE 205
Query: 67 -RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A++
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 261
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPID 162
L+ R+L +P +R +VLEHPW+ + S KP +
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITAN---SSKPSN 295
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-XXLCGTLDYLPPEM 177
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEX 182
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 238
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 239 RDLISRLLKHNPSQRPXLREVLEHPWITAN---SSKP 272
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-AALCGTLDYLPPEM 180
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 236
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TXLCGTLDYLPPEM 177
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 180
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 236
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWL 150
++L+ R+L +P +R +VLEHPW+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-XXLCGTLDYLPPEM 180
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 236
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWL 150
++L+ R+L +P +R +VLEHPW+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-AALCGTLDYLPPEM 177
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 233
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + +CG+ Y+ PE+
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-TTLCGTLDYLPPEM 174
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 230
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWL 150
++L+ R+L +P +R +VLEHPW+
Sbjct: 231 RDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 91/159 (57%), Gaps = 21/159 (13%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-----------CGS 56
H++G+ HRD+KPENFLF S +++ +K +DFGLS KEF + G+
Sbjct: 185 HNQGICHRDIKPENFLF-STNKSFEIKLVDFGLS------KEFYKLNNGEYYGMTTKAGT 237
Query: 57 AFYVAPEVLR---RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI 113
++VAPEVL YG + D WSAGV+L++LL G PF D ++ ++ F+
Sbjct: 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN 297
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ V+S A++L+ +L ++ +R A + L+HPW+ +
Sbjct: 298 PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 12/155 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHSK V+HRD+KPEN L S E LK +FG SV + +CG+ Y+ PE++
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGE---LKIANFGWSVHAPSSRR-TTLCGTLDYLPPEMIE 181
Query: 67 -RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A++
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 237
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 269
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK +FG SV + +CG+ Y+ PE+
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWSVHAPSSRR-TTLCGTLDYLPPEM 180
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 236
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 12/157 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE+
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSRR-XXLXGTLDYLPPEM 182
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 238
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
++L+ R+L +P +R +VLEHPW+ + S KP
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 12/160 (7%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CHSK V+HRD+KPEN L S E LK DFG S + + G+ Y+ PE+
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSCHAPSSRR-TTLSGTLDYLPPEM 178
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ R + ++ D+WS GV+ Y L G PPF A+T + ++ I + E F ++ A
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGA 234
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDT 163
++L+ R+L +P +R +VLEHPW+ + S KP ++
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKPSNS 271
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
H ++H D+KPEN + +K ++V K IDFGL+ + + + +A + APE++ R
Sbjct: 166 HEHSIVHLDIKPENIMCETKKASSV-KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR 224
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
G D+W+ GV+ Y+LL G+ PF + D + +++ + +F D + +S AK+
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF 284
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLK 151
++ +L ++P+KR+T LEHPWLK
Sbjct: 285 IKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 9/158 (5%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CH + V+HRD+KPEN L K E LK DFG SV + R +CG+ Y+ PE+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLRR-RXMCGTLDYLPPEM 183
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ + + ++ D+W AGV+ Y L G+PPF + + I ++ F P +S +
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGS 239
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPI 161
K+L+ ++L P +R+ V+EHPW+K + P+
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 9/158 (5%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CH + V+HRD+KPEN L K E LK DFG SV + R +CG+ Y+ PE+
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLRR-RXMCGTLDYLPPEM 184
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ + + ++ D+W AGV+ Y L G+PPF + + I ++ F P +S +
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGS 240
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPI 161
K+L+ ++L P +R+ V+EHPW+K + P+
Sbjct: 241 KDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 278
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 9/158 (5%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+ CH + V+HRD+KPEN L K E LK DFG SV + R +CG+ Y+ PE+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLRR-RXMCGTLDYLPPEM 183
Query: 65 LR-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
+ + + ++ D+W AGV+ Y L G+PPF + + I ++ F P +S +
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGS 239
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPI 161
K+L+ ++L P +R+ V+EHPW+K + P+
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE-FRDVCGSAFYVAPEVLR 66
HS G++HRDL N L T N +K DFGL+ ++ E +CG+ Y++PE+
Sbjct: 129 HSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
R +G E+D+WS G + Y LL G PPF DT + ++ D+++ + +S AK+
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSF--LSIEAKD 241
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWLKESGEASDK 159
L+ ++L ++P R++ + VL+HP++ + K
Sbjct: 242 LIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSK 275
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++H DLKP+N L +S +K +DFG+S I E R++ G+ Y+APE+L
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNY 207
Query: 68 RYGKEA-DIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
A D+W+ G+I Y+LL PF + ++ + I + +D+ + + +S A +
Sbjct: 208 DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDF 267
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKE 152
++ +L ++P+KR TA L H WL++
Sbjct: 268 IQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 21/161 (13%)
Query: 4 ANVC------HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSA 57
A VC HSK +++RDLKPEN L D+N +K DFG + ++ + +CG+
Sbjct: 113 AEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDVT--YXLCGTP 167
Query: 58 FYVAPEVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPW 116
Y+APEV+ + Y K D WS G+++Y +L G PF+ +E+I E+ F
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP---- 223
Query: 117 PVISSSAKELVRRMLTQDPKKRITAAQ-----VLEHPWLKE 152
P + K+L+ R++T+D +R+ Q V HPW KE
Sbjct: 224 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H ++H DLKPEN L ++D + K IDFGL+ + ++ + G+ ++APEV+
Sbjct: 204 HQMYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY 262
Query: 68 RYGK-EADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ D+WS GVI Y+LL G+ PF D D I D + + + IS AKE
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF 322
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKE 152
+ ++L ++ RI+A++ L+HPWL +
Sbjct: 323 ISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CGS Y
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYA 177
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 233
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L++R L +P KR T Q+++ W+ E
Sbjct: 234 MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + + CGS Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYA 179
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 235
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L+++ L +P KR T Q+++ W+ E
Sbjct: 236 MSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 82/140 (58%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL- 65
H+ V+HRDLK N LF + D + +K DFGL+ IE +G+ +D+CG+ Y+APEVL
Sbjct: 159 HNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 215
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E DIWS G ILY LL G PPF + + I+K E PV S+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA---- 271
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+RRML DP R + A++L
Sbjct: 272 LIRRMLHADPTLRPSVAELL 291
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH K V+HRD+KPEN L K E + DFG SV + + +CG+ Y+ PE++
Sbjct: 139 CHGKKVIHRDIKPENLLLGLKGELKI---ADFGWSVHAPSLRR-KTMCGTLDYLPPEMIE 194
Query: 67 -RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
R + ++ D+W GV+ Y LL G PPF + + + I K ++ F + + A++
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS----VPTGAQD 250
Query: 126 LVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
L+ ++L +P +R+ AQV HPW++ + P
Sbjct: 251 LISKLLRHNPSERLPLAQVSAHPWVRANSRRVLPP 285
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 82/140 (58%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL- 65
H+ V+HRDLK N LF + D + +K DFGL+ IE +G+ +D+CG+ Y+APEVL
Sbjct: 143 HNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 199
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E DIWS G ILY LL G PPF + + I+K E PV S+
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA---- 255
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+RRML DP R + A++L
Sbjct: 256 LIRRMLHADPTLRPSVAELL 275
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CGS Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 235
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L+++ L +P KR T Q+++ W+ E
Sbjct: 236 MSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CGS Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 235
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L+++ L +P KR T Q+++ W+ E
Sbjct: 236 MSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CGS Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 235
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L+++ L +P KR T Q+++ W+ E
Sbjct: 236 MSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CGS Y
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 172
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 228
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L+++ L +P KR T Q+++ W+ E
Sbjct: 229 MSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CG+ Y
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 236
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L++R L +P KR T Q+++ W+ E
Sbjct: 237 MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
HS+ V++RD+K EN + D++ +K DFGL I +G + CG+ Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG+ D W GV++Y ++CG PF+ E +FE I EI F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 234
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEH 147
L+ +L +DPK+R+ A +V+EH
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
HS+ V++RD+K EN + D++ +K DFGL I +G + CG+ Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG+ D W GV++Y ++CG PF+ E +FE I EI F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 234
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEH 147
L+ +L +DPK+R+ A +V+EH
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
HS+ V++RD+K EN + D++ +K DFGL I +G + CG+ Y+APEVL
Sbjct: 125 HSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG+ D W GV++Y ++CG PF+ E +FE I EI F +S AK
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 237
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEH 147
L+ +L +DPK+R+ A +V+EH
Sbjct: 238 LLAGLLKKDPKQRLGGGPSDAKEVMEH 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
HS+ V++RD+K EN + D++ +K DFGL I +G + CG+ Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG+ D W GV++Y ++CG PF+ E +FE I EI F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 234
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEH 147
L+ +L +DPK+R+ A +V+EH
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
HS+ V++RD+K EN + D++ +K DFGL I +G + CG+ Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG+ D W GV++Y ++CG PF+ E +FE I EI F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 234
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEH 147
L+ +L +DPK+R+ A +V+EH
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
HS+ V++RD+K EN + D++ +K DFGL I +G + CG+ Y+APEVL
Sbjct: 127 HSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG+ D W GV++Y ++CG PF+ E +FE I EI F +S AK
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 239
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEH 147
L+ +L +DPK+R+ A +V+EH
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEH 266
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
HS+ V++RD+K EN + D++ +K DFGL I +G + CG+ Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG+ D W GV++Y ++CG PF+ E +FE I EI F +S AK
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKS 234
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEH 147
L+ +L +DPK+R+ A +V+EH
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 146 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 258
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 259 RDLVEKLLVLDATKRLGCEEM 279
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 152 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFP----KA 264
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 265 RDLVEKLLVLDATKRL 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 149 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 261
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 262 RDLVEKLLVLDATKRL 277
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 146 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 258
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 259 RDLVEKLLVLDATKRLGCEEM 279
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 150 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 262
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 263 RDLVEKLLVLDATKRL 278
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CG+ Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 235
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L+++ L +P KR T Q+++ W+ E
Sbjct: 236 MSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 147 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 259
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 260 RDLVEKLLVLDATKRL 275
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 147 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 259
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 260 RDLVEKLLVLDATKRL 275
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 149 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 261
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 262 RDLVEKLLVLDATKRL 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRD--VCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 147 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 259
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 260 RDLVEKLLVLDATKRL 275
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 147 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 259
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 260 RDLVEKLLVLDATKRL 275
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 131 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 243
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 244 RDLVEKLLVLDATKRLGCEEM 264
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 149 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 261
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 262 RDLVEKLLVLDATKRL 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL- 65
H+ V+HRDLK N LF + D + +K DFGL+ IE +G+ + +CG+ Y+APEVL
Sbjct: 159 HNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC 215
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E DIWS G ILY LL G PPF + + I+K E PV S+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA---- 271
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+RRML DP R + A++L
Sbjct: 272 LIRRMLHADPTLRPSVAELL 291
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 150 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 262
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 263 RDLVEKLLVLDATKRL 278
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 149 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 261
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 262 RDLVEKLLVLDATKRLGCEEM 282
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL- 65
H+ V+HRDLK N LF + D + +K DFGL+ IE +G+ + +CG+ Y+APEVL
Sbjct: 159 HNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC 215
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E DIWS G ILY LL G PPF + + I+K E PV S+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA---- 271
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+RRML DP R + A++L
Sbjct: 272 LIRRMLHADPTLRPSVAELL 291
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 125 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 237
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 238 RDLVEKLLVLDATKRLGCEEM 258
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 154 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 266
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 267 RDLVEKLLVLDATKRLGCEEM 287
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 124 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 236
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 237 RDLVEKLLVLDATKRLGCEEM 257
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 126 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 238
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 239 RDLVEKLLVLDATKRLGCEEM 259
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 127 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF++I K E DF +P A
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KA 239
Query: 124 KELVRRMLTQDPKKRITAAQV 144
++LV ++L D KR+ ++
Sbjct: 240 RDLVEKLLVLDATKRLGCEEM 260
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPE 63
+V H++GV+HRD+K ++ L T + +K DFG + +E + + G+ +++APE
Sbjct: 139 SVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 195
Query: 64 VLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
++ R YG E DIWS G+++ ++ G PP++ + + IR + ++ +S S
Sbjct: 196 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPS 254
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
K + R+L +DP +R TAA++L+HP+L ++G +
Sbjct: 255 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 290
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPE 63
+V H++GV+HRD+K ++ L T + +K DFG + +E + + G+ +++APE
Sbjct: 141 SVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 197
Query: 64 VLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
++ R YG E DIWS G+++ ++ G PP++ + + IR + ++ +S S
Sbjct: 198 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPS 256
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
K + R+L +DP +R TAA++L+HP+L ++G +
Sbjct: 257 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 292
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPE 63
+V H++GV+HRD+K ++ L T + +K DFG + +E + + G+ +++APE
Sbjct: 184 SVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 240
Query: 64 VLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
++ R YG E DIWS G+++ ++ G PP++ + + IR + ++ +S S
Sbjct: 241 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPS 299
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
K + R+L +DP +R TAA++L+HP+L ++G +
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 335
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 93/160 (58%), Gaps = 6/160 (3%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFY 59
+ +V H++GV+HRD+K ++ L T + +K DFG + +E + + G+ ++
Sbjct: 257 LQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 313
Query: 60 VAPEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
+APE++ R YG E DIWS G+++ ++ G PP++ + + IR + ++
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHK 372
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
+S S K + R+L +DP +R TAA++L+HP+L ++G +
Sbjct: 373 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 412
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPE 63
+V H++GV+HRD+K ++ L T + +K DFG + +E + + G+ +++APE
Sbjct: 134 SVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 190
Query: 64 VLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
++ R YG E DIWS G+++ ++ G PP++ + + IR + ++ +S S
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPS 249
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
K + R+L +DP +R TAA++L+HP+L ++G +
Sbjct: 250 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPE 63
+V H++GV+HRD+K ++ L T + +K DFG + +E + + G+ +++APE
Sbjct: 130 SVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 186
Query: 64 VLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
++ R YG E DIWS G+++ ++ G PP++ + + IR + ++ +S S
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPRLKNLHKVSPS 245
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
K + R+L +DP +R TAA++L+HP+L ++G +
Sbjct: 246 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 281
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
CH+ V HRDLK EN L LK DFG S + + G+ Y+APEVL
Sbjct: 130 CHAMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 188
Query: 66 RRRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDPWPVISSS 122
++ Y GK AD+WS GV LY++L G PF + F + R + + I + IS
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 248
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEA---SDKPIDTAVLFRMKQFMAMNXXX 179
+ L+ R+ DP KRI+ ++ H W ++ A +D + T QF A +
Sbjct: 249 CRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTT-------QFAASDQ-- 299
Query: 180 XXXXXVIVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAG 221
P + I+++ Q E +GT + + G
Sbjct: 300 -----------PGQSIEEIMQIIAEATVPPAGTQNLNHYLTG 330
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 122 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 237
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 122 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 237
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 120 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 235
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 236 PLALLHKILVENPSARITIPDIKKDRW 262
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 122 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 237
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 149 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF +I K E DF +P A
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KA 261
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 262 RDLVEKLLVLDATKRL 277
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 122 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 237
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 122 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 237
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 122 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 237
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 11/136 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFR--DVCGSAFYVAPEV 64
H KG++HRDLKPEN L +E+ ++ DFG + V E K+ R G+A YV+PE+
Sbjct: 149 HGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 65 LRRRYG-KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
L + K +D+W+ G I+Y L+ G+PPF A + IF +I K E DF +P A
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KA 261
Query: 124 KELVRRMLTQDPKKRI 139
++LV ++L D KR+
Sbjct: 262 RDLVEKLLVLDATKRL 277
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E +CG+ YVAPE+
Sbjct: 122 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 237
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
CH+ V HRDLK EN L LK DFG S + + G+ Y+APEVL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 66 RRRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDPWPVISSS 122
++ Y GK AD+WS GV LY++L G PF + F + R + + I + IS
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
+ L+ R+ DP KRI+ ++ H W
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
CH+ V HRDLK EN L LK FG S + +D G+ Y+APEVL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL 189
Query: 66 RRRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDPWPVISSS 122
++ Y GK AD+WS GV LY++L G PF + F + R + + I + IS
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
+ L+ R+ DP KRI+ ++ H W
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 93/170 (54%), Gaps = 28/170 (16%)
Query: 3 VANVC----------HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD 52
+A VC H++GV+HRD+K ++ L T + +K DFG I + R
Sbjct: 143 IATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRK 199
Query: 53 -VCGSAFYVAPEVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEID 110
+ G+ +++APEV+ R Y E DIWS G+++ ++ G PP+++D+ + +R
Sbjct: 200 XLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS--- 256
Query: 111 FQIDPWPVISSSAK------ELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
P P + +S K + + RML +DP++R TA ++L+HP+L ++G
Sbjct: 257 ----PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 248 TIDYIEFITATMQRHKL-ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 421
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 386
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 173 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 228
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSEC 278
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 386
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 129 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 185
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS +
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQ 235
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 236 HLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 130 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 186
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS +
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQ 236
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 173 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 228
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSEC 278
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 131 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 187
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQ 237
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 383
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 384 EVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 158 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 213
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSEC 263
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 130 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 186
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS +
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQ 236
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 145 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 200
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSEC 250
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 15/155 (9%)
Query: 1 MTVANVCHS-KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAF 58
++ + HS K V++RDLK EN + D++ +K DFGL I++G + CG+
Sbjct: 118 VSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 174
Query: 59 YVAPEVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWP 117
Y+APEVL YG+ D W GV++Y ++CG PF+ E +FE I EI F
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----R 230
Query: 118 VISSSAKELVRRMLTQDPKKRIT-----AAQVLEH 147
+ AK L+ +L +DPK+R+ A ++++H
Sbjct: 231 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 265
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 131 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 187
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQ 237
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 131 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 187
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQ 237
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 146 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 201
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSEC 251
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 15/155 (9%)
Query: 1 MTVANVCHS-KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAF 58
++ + HS K V++RDLK EN + D++ +K DFGL I++G + CG+
Sbjct: 261 VSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 317
Query: 59 YVAPEVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWP 117
Y+APEVL YG+ D W GV++Y ++CG PF+ E +FE I EI F
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----R 373
Query: 118 VISSSAKELVRRMLTQDPKKRIT-----AAQVLEH 147
+ AK L+ +L +DPK+R+ A ++++H
Sbjct: 374 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 15/155 (9%)
Query: 1 MTVANVCHS-KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAF 58
++ + HS K V++RDLK EN + D++ +K DFGL I++G + CG+
Sbjct: 120 VSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 176
Query: 59 YVAPEVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWP 117
Y+APEVL YG+ D W GV++Y ++CG PF+ E +FE I EI F
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----R 232
Query: 118 VISSSAKELVRRMLTQDPKKRIT-----AAQVLEH 147
+ AK L+ +L +DPK+R+ A ++++H
Sbjct: 233 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 267
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 15/155 (9%)
Query: 1 MTVANVCHS-KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAF 58
++ + HS K V++RDLK EN + D++ +K DFGL I++G + CG+
Sbjct: 119 VSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 175
Query: 59 YVAPEVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWP 117
Y+APEVL YG+ D W GV++Y ++CG PF+ E +FE I EI F
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----R 231
Query: 118 VISSSAKELVRRMLTQDPKKRIT-----AAQVLEH 147
+ AK L+ +L +DPK+R+ A ++++H
Sbjct: 232 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 266
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 182
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQ 232
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 165 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 220
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +SS
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSEC 270
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM--TNLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 15/155 (9%)
Query: 1 MTVANVCHS-KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAF 58
++ + HS K V++RDLK EN + D++ +K DFGL I++G + CG+
Sbjct: 258 VSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314
Query: 59 YVAPEVLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWP 117
Y+APEVL YG+ D W GV++Y ++CG PF+ E +FE I EI F
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----R 370
Query: 118 VISSSAKELVRRMLTQDPKKRIT-----AAQVLEH 147
+ AK L+ +L +DPK+R+ A ++++H
Sbjct: 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CG+ Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 235
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPW 149
S+ + L+++ L +P KR T Q+ + W
Sbjct: 236 XSTDCENLLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ +K DFGL+ ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 16/167 (9%)
Query: 3 VANVC----------HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFR 51
+A VC H++GV+HRD+K ++ L TS + +K DFG + +E + +
Sbjct: 143 IATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRK 199
Query: 52 DVCGSAFYVAPEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEID 110
+ G+ +++APEV+ R YG E DIWS G+++ ++ G PP++ + IR +
Sbjct: 200 XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD-SLP 258
Query: 111 FQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
++ +SS + + ML ++P +R TA ++L HP+LK +G S
Sbjct: 259 PRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPS 305
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 185 VIVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADID 244
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 245 GNGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD-- 301
GNGTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKL 120
Query: 302 -DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 121 TDEEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 119
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 120 DEEVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L DE ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 144 LHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 198
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 254
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 255 LLRNLLQVDLTKRF 268
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 159 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 214
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI G++ F+ +SS
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR----VSSEC 264
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 158 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 213
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI G++ F+ +SS
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR----VSSEC 263
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 126 CHNXGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 182
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +S +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXECQ 232
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 158 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 213
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI G++ F+ +SS
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR----VSSEC 263
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 159 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 214
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI G++ F+ +SS
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR----VSSEC 264
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Query: 161 IDTAVLFRMKQFMAMNXXXXXXXXVIVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKA 220
+ + +L +K F N +I ++L EI L+ F +D D SGTLS E+
Sbjct: 22 LSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILD 81
Query: 221 GLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKD 280
GL K+G D+ Q ++ D + +G I Y +F+ AT+ + + E F++FD D
Sbjct: 82 GLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDID 141
Query: 281 NDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDEFCAMMKR 331
+ I+V+EL+ F ++ + D I ++ EVD + DG I + EF MM +
Sbjct: 142 GNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 126 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 182
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI G++ F+ +SS +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR----VSSECQ 232
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
GTID+ EF+T M R + E + +AF+ FDKD + +I+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTM-MARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLTDE 117
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVTMM 143
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 163 TAVLFRMKQFMAMNXXXXXXXXVIVENLPT-EEIQKLKQKFTEMDTDKSGTLSYDELKAG 221
T L MK+F + + L T EE ++L Q F ++D + G L EL G
Sbjct: 6 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 222 LAKL----GSTLREVDVKQY-------MQAADIDGNGTIDYIEFITATMQRHKLERFEHL 270
KL G T+ ++D Q +Q+ D D NG I+Y EF+T M + L E L
Sbjct: 66 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 271 DKAFQYFDKDNDRYITVDELETAFKEYNMGDDATIKEIMSEVDRDKDGRISYDEFCAMMK 330
AFQ FD D IT +EL F + DD T +++ E D++ DG + ++EF MM+
Sbjct: 126 LAAFQQFDSDGSGKITNEELGRLFGVTEV-DDETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Query: 331 R 331
+
Sbjct: 185 K 185
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 250 DYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATI 305
D+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D +
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 118
Query: 306 KEIMSEVDRDKDGRISYDEFCAMM 329
E++ E D D DG+++Y+EF MM
Sbjct: 119 DEMIREADIDGDGQVNYEEFVQMM 142
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ ++ DFGL+ ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEXLTD 119
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEXLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
CH+ V HRDLK EN L LK FG S + + G+ Y+APEVL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 66 RRRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDPWPVISSS 122
++ Y GK AD+WS GV LY++L G PF + F + R + + I + IS
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
+ L+ R+ DP KRI+ ++ H W
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 250 DYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATI 305
D+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 119
Query: 306 KEIMSEVDRDKDGRISYDEFCAMM 329
E++ E D D DG+++Y+EF MM
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 124
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 125 EEVDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 15/150 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRITAAQ-----VLEHPWL 150
L+R +L D KR + + H W
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 193 EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKL-GSTLREVDVKQY-------MQAADID 244
EE ++L F +D + G L EL G +KL G + D+ Q + AAD D
Sbjct: 60 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFD 119
Query: 245 GNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT 304
NG IDY EF+T M R L + L+ AFQ FD+D + I+VDEL + F ++ + T
Sbjct: 120 RNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL-ESKT 178
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKR 331
KE++S +D + DG + ++EFC M+++
Sbjct: 179 WKEMISGIDSNNDGDVDFEEFCKMIQK 205
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 193 EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYI 252
E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNGTID+
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 253 EFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIM 309
EF+T ++ K E + +AF+ FDKD + YI+ EL N+G+ D + E++
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMI 120
Query: 310 SEVDRDKDGRISYDEFCAMM 329
E + D DG+++Y+EF MM
Sbjct: 121 REANIDGDGQVNYEEFVQMM 140
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 189 NLP----TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADID 244
NLP E+I + K+ F+ D D GT++ EL + LG E +++ + D D
Sbjct: 299 NLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 358
Query: 245 GNGTIDYIEFITATMQRHKL-ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD-- 301
G+GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 359 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKL 416
Query: 302 -DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 417 TDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D DG I +
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 367 EFLTMMAR 374
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 15/150 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRITAAQ-----VLEHPWL 150
L+R +L D KR + + H W
Sbjct: 269 LLRNLLQVDLTKRFGNLKNGVNDIXNHKWF 298
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T + K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 250 DYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATI 305
D+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 119
Query: 306 KEIMSEVDRDKDGRISYDEFCAMM 329
E++ E D D DG+++Y+EF MM
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 189 NLP----TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADID 244
NLP E+I + K+ F+ D D GT++ EL + LG E +++ + D D
Sbjct: 299 NLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 358
Query: 245 GNGTIDYIEFITATMQRHKL-ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD-- 301
G+GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 359 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKL 416
Query: 302 -DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 417 TDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D DG I +
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 367 EFLTMMAR 374
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 248 TIDYIEFITATMQRHKL-ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D DG I +
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 367
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 368 EFLTMMAR 375
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ +K DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 178 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 233
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +S
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXEC 283
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 284 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 146 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 202
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +S +
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXECQ 252
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 253 HLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 419
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D DG I +
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 367 EFLTMMAR 374
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 145 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 201
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +S +
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXECQ 251
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 252 HLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 14/152 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
H KG+++RDLKPEN + + +K DFGL I +G CG+ Y+APE+L
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
R + + D WS G ++Y +L G PPF + + ++I K +++ P ++ A++
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARD 250
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEHPWLKE 152
L++++L ++ R+ A +V HP+ +
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 153 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 209
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +S +
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXECQ 259
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 260 HLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 173 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 228
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +S
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXEC 278
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 118
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 119 EVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 14/152 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
H KG+++RDLKPEN + + +K DFGL I +G CG+ Y+APE+L
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
R + + D WS G ++Y +L G PPF + + ++I K +++ P ++ A++
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARD 250
Query: 126 LVRRMLTQDPKKRIT-----AAQVLEHPWLKE 152
L++++L ++ R+ A +V HP+ +
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 15/150 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRITAAQ-----VLEHPWL 150
L+R +L D KR + + H W
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 150 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 204
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 260
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 261 LLRNLLQVDLTKRF 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CH+ GV+HRD+K EN L LK IDFG +++ + D G+ Y PE +R
Sbjct: 146 CHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIR 202
Query: 67 --RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R +G+ A +WS G++LY ++CG PF D EEI +G++ F+ +S +
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSXECQ 252
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKE 152
L+R L P R T ++ HPW+++
Sbjct: 253 HLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + +I+ EL N+G+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 15/150 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 152 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 206
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 262
Query: 126 LVRRMLTQDPKKRITAAQ-----VLEHPWL 150
L+R +L D KR + + H W
Sbjct: 263 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVLR 66
H V+HRDLK N +E+ +K DFGL+ +E +G+ + +CG+ Y+APEVL
Sbjct: 138 HRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 194
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E D+WS G I+Y LL G PPF + + I+K E PV +S
Sbjct: 195 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS---- 250
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+++ML DP R T ++L
Sbjct: 251 LIQKMLQTDPTARPTINELL 270
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 150 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 204
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 260
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 261 LLRNLLQVDLTKRF 274
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 212
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 268
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 269 LLRNLLQVDLTKRF 282
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 178 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 232
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 288
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 289 LLRNLLQVDLTKRF 302
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + +++ E D D DG+++Y+EF MM
Sbjct: 119 DEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + +I+ EL N+G+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 143 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIIL 197
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 253
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 254 LLRNLLQVDLTKRF 267
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 178 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 232
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 288
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 289 LLRNLLQVDLTKRF 302
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 10/133 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 158 HSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILS 212
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+L
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDL 268
Query: 127 VRRMLTQDPKKRI 139
+R +L D KR
Sbjct: 269 LRNLLQVDLTKRF 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVLR 66
H V+HRDLK N +E+ +K DFGL+ +E +G+ + +CG+ Y+APEVL
Sbjct: 134 HRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E D+WS G I+Y LL G PPF + + I+K E PV +S
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS---- 246
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+++ML DP R T ++L
Sbjct: 247 LIQKMLQTDPTARPTINELL 266
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS--VFIEEGKEFRDVCGSAFYVAPEV 64
H G+++RD+K EN L D N + DFGLS +E + D CG+ Y+AP++
Sbjct: 175 LHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 65 LR---RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV-IS 120
+R + K D WS GV++Y LL G PF D ++ EI + + + P+P +S
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMS 290
Query: 121 SSAKELVRRMLTQDPKKRI 139
+ AK+L++R+L +DPKKR+
Sbjct: 291 ALAKDLIQRLLMKDPKKRL 309
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVLR 66
H V+HRDLK N +E+ +K DFGL+ +E +G+ + +CG+ Y+APEVL
Sbjct: 134 HRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E D+WS G I+Y LL G PPF + + I+K E PV +S
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS---- 246
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+++ML DP R T ++L
Sbjct: 247 LIQKMLQTDPTARPTINELL 266
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + +I+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 193 EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYI 252
E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNGTID+
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 253 EFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEI 308
EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D + E+
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEM 120
Query: 309 MSEVDRDKDGRISYDEFCAMM 329
+ E D D DG+++Y+EF MM
Sbjct: 121 IREADIDGDGQVNYEEFVQMM 141
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +++++ F D D +G +S EL+ + LG L + +V + ++ ADIDG+G ++Y
Sbjct: 75 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 134
Query: 252 IEFI 255
EF+
Sbjct: 135 EEFV 138
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 193 EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYI 252
E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNGTID+
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 253 EFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEI 308
EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D + E+
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEM 122
Query: 309 MSEVDRDKDGRISYDEFCAMM 329
+ E D D DG+++Y+EF MM
Sbjct: 123 IREADIDGDGQVNYEEFVQMM 143
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +++++ F D D +G +S EL+ + LG L + +V + ++ ADIDG+G ++Y
Sbjct: 77 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 252 IEFI 255
EF+
Sbjct: 137 EEFV 140
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + +I+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E + G+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+T ++ K + E + +AF+ FDKD + +I+ EL N+G+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+++Y+EF MM
Sbjct: 119 DEEVDEMIRESDIDGDGQVNYEEFVTMM 146
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E + G+ YVAPE+
Sbjct: 122 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 237
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E + G+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E + G+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 159 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 214
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI G++ F+ +S
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR----VSXEC 264
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ +CG+ Y+APE+ L
Sbjct: 178 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT--WTLCGTPEYLAPEIIL 232
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 288
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 289 LLRNLLQVDLTKRF 302
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 159 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 214
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI G++ F+ +S
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR----VSXEC 264
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 17/149 (11%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDEN-AVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL 65
CH+ GV+HRD+K EN L D N LK IDFG +++ + D G+ Y PE +
Sbjct: 158 CHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 213
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R R +G+ A +WS G++LY ++CG PF D EEI G++ F+ +S
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIGGQVFFRQR----VSXEC 263
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKE 152
+ L+R L P R T ++ HPW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVLR 66
H V+HRDLK N +E+ +K DFGL+ +E +G+ + +CG+ Y+APEVL
Sbjct: 156 HRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 212
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E D+WS G I+Y LL G PPF + + I+K E PV +S
Sbjct: 213 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS---- 268
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+++ML DP R T ++L
Sbjct: 269 LIQKMLQTDPTARPTINELL 288
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
H+ V HRDLK EN L LK DFG S + + G+ Y+APEVL
Sbjct: 131 AHAMQVAHRDLKLENTLLDGSPAPR-LKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL 189
Query: 66 RRRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDPWPVISSS 122
++ Y GK AD+WS GV LY++L G PF + F + R + + I + IS
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
+ L+ R+ DP KRI+ ++ H W
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E + D DG+++Y+EF MM
Sbjct: 119 EEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL-SVFIEEGKE--FRDVCGSAFYVAPEV 64
H G+ HRD+KPEN L +D LK DFGL +VF +E + G+ YVAPE+
Sbjct: 121 HGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 65 LRRR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
L+RR + + D+WS G++L +L G P W + E E ++PW I S+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSA 236
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPW 149
L+ ++L ++P RIT + + W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN + D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG+G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ EF+ ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 411
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 412 EVDEMIREADIDGDGQVNYEEFVQMM 437
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D DG I +
Sbjct: 299 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 358
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 359 EFLIMMAR 366
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVLR 66
H V+HRDLK N +E+ +K DFGL+ +E +G+ + +CG+ Y+APEVL
Sbjct: 158 HRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 214
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E D+WS G I+Y LL G PPF + + I+K E PV +S
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS---- 270
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+++ML DP R T ++L
Sbjct: 271 LIQKMLQTDPTARPTINELL 290
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
H KG+++RDLK +N L D K DFG+ I G CG+ Y+APE+L+
Sbjct: 141 HDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ 197
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
YG D W+ GV+LY +LCG PF A+ ++ +FE I E+ + W + A
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATG 253
Query: 126 LVRRMLTQDPKKRITAAQ------VLEHPWLKE 152
+++ +T++P R+ + +L HP+ KE
Sbjct: 254 ILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVLR 66
H V+HRDLK N +E+ +K DFGL+ +E +G+ + +CG+ Y+APEVL
Sbjct: 132 HRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 188
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ + E D+WS G I+Y LL G PPF + + I+K E PV +S
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS---- 244
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+++ML DP R T ++L
Sbjct: 245 LIQKMLQTDPTARPTINELL 264
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+ Q++++ F DTD SGT+ ELK + LG ++ ++K+ + D DG+GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 250 DYIEFIT-ATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT---I 305
D+ EF+T T + + + E + KAF+ FD DN IT+ +L KE +G++ T +
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKE--LGENLTEEEL 139
Query: 306 KEIMSEVDRDKDGRISYDEFCAMMKR 331
+E+++E DR+ D I DEF +MK+
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIMKK 165
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D DG I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 15/150 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
HS +++RDLKPEN + D+ ++ DFG + ++ G+ + +CG+ Y+APE++
Sbjct: 157 LHSLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIII 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRITAAQ-----VLEHPWL 150
L+R +L D KR + + H W
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+AP + L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 10/132 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKK 137
L+R +L D K
Sbjct: 268 LLRNLLQVDLTK 279
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 44/201 (21%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---------GKE-- 49
+ V H V+HRDLKP N L S N LK DFGL+ I+E G++
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 50 FRDVCGSAFYVAPEVL--RRRYGKEADIWSAGVILYILLCGVPPF--------------- 92
+ + +Y APEV+ +Y + D+WS G IL L P F
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238
Query: 93 ----WADTDEGIFEEIRKGEIDFQIDPWPV---------ISSSAKELVRRMLTQDPKKRI 139
+D D E R E + +P ++ +L++RML DP KRI
Sbjct: 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRI 298
Query: 140 TAAQVLEHPWLKESGEASDKP 160
TA + LEHP+L+ + +D+P
Sbjct: 299 TAKEALEHPYLQTYHDPNDEP 319
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 44/201 (21%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---------GKE-- 49
+ V H V+HRDLKP N L S N LK DFGL+ I+E G++
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 50 FRDVCGSAFYVAPEVL--RRRYGKEADIWSAGVILYILLCGVPPF--------------- 92
+ + +Y APEV+ +Y + D+WS G IL L P F
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238
Query: 93 ----WADTDEGIFEEIRKGEIDFQIDPWPV---------ISSSAKELVRRMLTQDPKKRI 139
+D D E R E + +P ++ +L++RML DP KRI
Sbjct: 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRI 298
Query: 140 TAAQVLEHPWLKESGEASDKP 160
TA + LEHP+L+ + +D+P
Sbjct: 299 TAKEALEHPYLQTYHDPNDEP 319
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
HS +++RDLKPEN L S+ + DFGL IE CG+ Y+APEVL
Sbjct: 156 HSLNIVYRDLKPENILLDSQGH---IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
++ Y + D W G +LY +L G+PPF++ +++ I + + P I++SA+
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARH 268
Query: 126 LVRRMLTQDPKKRITA 141
L+ +L +D KR+ A
Sbjct: 269 LLEGLLQKDRTKRLGA 284
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 44/201 (21%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---------GKE-- 49
+ V H V+HRDLKP N L S N LK DFGL+ I+E G++
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 50 FRDVCGSAFYVAPEVL--RRRYGKEADIWSAGVILYILLCGVPPF--------------- 92
+ + +Y APEV+ +Y + D+WS G IL L P F
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238
Query: 93 ----WADTDEGIFEEIRKGEIDFQIDPWPV---------ISSSAKELVRRMLTQDPKKRI 139
+D D E R E + +P ++ +L++RML DP KRI
Sbjct: 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRI 298
Query: 140 TAAQVLEHPWLKESGEASDKP 160
TA + LEHP+L+ + +D+P
Sbjct: 299 TAKEALEHPYLQTYHDPNDEP 319
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
CHS+GV+HRD+K EN L + A K IDFG + + + + D G+ Y PE +
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLHD-EPYTDFDGTRVYSPPEWIS 211
Query: 67 RR--YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R + A +WS G++LY ++CG PF D +EI + E+ F +S
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEAELHFPAH----VSPDCC 261
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTA 164
L+RR L P R + ++L PW++ E D P++ +
Sbjct: 262 ALIRRCLAPKPSSRPSLEEILLDPWMQTPAE--DVPLNPS 299
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 250 DYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATI 305
D+ EF+ ++ K + E L +AF+ FDKD + +I+ EL N+G+ D +
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM--TNLGEKLTDEEV 118
Query: 306 KEIMSEVDRDKDGRISYDEFCAMM 329
E++ E D D DG+++Y+EF +M
Sbjct: 119 DEMIREADVDGDGQVNYEEFVQVM 142
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ ++LK+ F D D +G +S EL+ + LG L + +V + ++ AD+DG+G ++Y
Sbjct: 76 TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 135
Query: 252 IEFITATMQR 261
EF+ M +
Sbjct: 136 EEFVQVMMAK 145
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+ ++ K + E L +AF+ FDKD + +I+ EL N+G+ D
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM--TNLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF +M
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ ++LK+ F D D +G +S EL+ + LG L + +V + ++ AD+DG+G ++Y
Sbjct: 79 TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 252 IEFITATMQR 261
EF+ M +
Sbjct: 139 EEFVQVMMAK 148
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFR--DVC----GSAFYVA 61
HS+G++H+D+KP N L T+ LK G++ E F D C GS +
Sbjct: 126 HSQGIVHKDIKPGNLLLTT---GGTLKISALGVA---EALHPFAADDTCRTSQGSPAFQP 179
Query: 62 PEV---LRRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
PE+ L G + DIWSAGV LY + G+ PF D +FE I KG D P
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPP 239
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPI 161
+S +L++ ML +P KR + Q+ +H W ++ ++ P+
Sbjct: 240 LS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 13/153 (8%)
Query: 7 CHSKG-----VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF-RDVCGSAFYV 60
CH + V+HRDLKP N K +K DFGL+ + ++F ++ G+ +Y+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI 119
+PE + R Y +++DIWS G +LY L +PPF A + + + +IR+G+ F+ P+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPYRY- 240
Query: 120 SSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
S E++ RML R + ++LE+P + E
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+ ++ K + E L +AF+ FDKD + +I+ EL N+G+ D
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVM--TNLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG+++Y+EF +M
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +KLK+ F D D +G +S EL+ + LG L + +V + ++ AD+DG+G ++Y
Sbjct: 79 TDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 252 IEFITATMQR 261
EF+ M +
Sbjct: 139 EEFVQVMMAK 148
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + +CG+ +APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + + G+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVL 65
HS G+++RDLKPEN L DE +K DFGLS I+ K+ CG+ Y+APEV+
Sbjct: 142 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR + + AD WS GV+++ +L G PF + I K ++ +S A+
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ 254
Query: 125 ELVRRMLTQDPKKRITAA 142
L+R + ++P R+ A
Sbjct: 255 SLLRMLFKRNPANRLGAG 272
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVL 65
HS G+++RDLKPEN L DE +K DFGLS I+ K+ CG+ Y+APEV+
Sbjct: 143 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR + + AD WS GV+++ +L G PF + I K ++ +S A+
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ 255
Query: 125 ELVRRMLTQDPKKRITAA 142
L+R + ++P R+ A
Sbjct: 256 SLLRMLFKRNPANRLGAG 273
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVL 65
HS G+++RDLKPEN L DE +K DFGLS I+ K+ CG+ Y+APEV+
Sbjct: 142 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR + + AD WS GV+++ +L G PF + I K ++ +S A+
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ 254
Query: 125 ELVRRMLTQDPKKRITAA 142
L+R + ++P R+ A
Sbjct: 255 SLLRMLFKRNPANRLGAG 272
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L ++I + K+ F+ D D G ++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+ ++ K + E L +AF+ FDKD + +I+ EL N+G+
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TNLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+I+YDEF +M
Sbjct: 119 DEEVDEMIREADVDGDGQINYDEFVKVM 146
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ ++LK+ F D D++G +S EL+ + LG L + +V + ++ AD+DG+G I+Y
Sbjct: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
Query: 252 IEFITATMQR 261
EF+ M +
Sbjct: 140 DEFVKVMMAK 149
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ + CHS + HRDLK EN L LK DFG S + + G+ Y+
Sbjct: 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYI 184
Query: 61 APEVL-RRRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDPW 116
APEVL R+ Y GK AD+WS GV LY++L G PF + + + R + + I
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDD 244
Query: 117 PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
IS L+ R+ DP RI+ ++ H W
Sbjct: 245 IRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 143 HSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGIN 259
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L +
Sbjct: 260 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYY 319
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 320 DPSDEPIAEA 329
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 53/75 (70%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ E L EEI LK+ F +DTD SGT+++DELK GL ++GS L E ++K M AADID
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 246 NGTIDYIEFITATMQ 260
+GTIDY EFI AT+
Sbjct: 73 SGTIDYGEFIAATVH 87
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 260 QRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDK 316
+R E L + F+ D DN IT DEL+ K +G ++ IK++M D DK
Sbjct: 15 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK--RVGSELMESEIKDLMDAADIDK 72
Query: 317 DGRISYDEFCA 327
G I Y EF A
Sbjct: 73 SGTIDYGEFIA 83
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
E L E+I + K+ F D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF++ ++ K + E L +AF+ FD+D + I+ EL N+G+ D
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMT--NLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG I+Y+EF MM
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 318 DPSDEPIAEA 327
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS +++RDLKPEN L D+ ++ DFG + ++ G+ + + G+ Y+APE+ L
Sbjct: 157 LHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIIL 211
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ Y K D W+ GV++Y + G PPF+AD I+E+I G++ F SS K+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKD 267
Query: 126 LVRRMLTQDPKKRI 139
L+R +L D KR
Sbjct: 268 LLRNLLQVDLTKRF 281
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
++ CH K ++HRDLK EN L D + +K DFG S G + CGS Y
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLL---DGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYA 180
Query: 61 APEVLR-RRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
APE+ + ++Y G E D+WS GVILY L+ G PF + + E + +G+ ++I +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIPFY-- 236
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+S+ + L++++L +P KR + Q+++ W+ E
Sbjct: 237 MSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHE 273
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 318 DPSDEPIAEA 327
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 318 DPSDEPIAEA 327
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 322 DPSDEPIAEA 331
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 84/150 (56%), Gaps = 14/150 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV--FIEEGKEFRDVCGSAFYVAPEVL 65
HSKG+++RDLK +N L D++ +K DFG+ + + K + CG+ Y+APE+L
Sbjct: 136 HSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKT-NEFCGTPDYIAPEIL 191
Query: 66 R-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP-WPVISSSA 123
++Y D WS GV+LY +L G PF +E +F IR +D P W + A
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR---MDNPFYPRW--LEKEA 246
Query: 124 KELVRRMLTQDPKKRITA-AQVLEHPWLKE 152
K+L+ ++ ++P+KR+ + +HP +E
Sbjct: 247 KDLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 322 DPSDEPIAEA 331
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFY 59
+ N CH +HRD+KPEN L T +++V+K DFG + + ++ D + +Y
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEVATRWY 168
Query: 60 VAPEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDF-----Q 112
+PE+L +YG D+W+ G + LL GVP + +D IRK D Q
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 228
Query: 113 I-------------DP---------WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
+ DP +P IS A L++ L DP +R+T Q+L HP+
Sbjct: 229 VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
Query: 151 KESGEASD 158
+ E D
Sbjct: 289 ENIREIED 296
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPFWA-------DTDEGIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + GI + +++ I+
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 278 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 338 DPSDEPIAEA 347
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIIN 255
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 256 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 316 DPSDEPIAEA 325
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 265
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 266 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 325
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 326 DPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 318 DPSDEPIAEA 327
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 255
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 256 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 316 DPSDEPIAEA 325
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 318 DPSDEPIAEA 327
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 259
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 260 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 319
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 320 DPSDEPIAEA 329
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 322 DPSDEPIAEA 331
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 263 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 322
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 323 DPSDEPIAEA 332
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 263
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 264 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 323
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 324 DPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 254
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 255 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 314
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 315 DPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 322 DPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 263 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 322
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 323 DPSDEPIAEA 332
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 322 DPSDEPIAEA 331
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 322 DPSDEPIAEA 331
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 7 CHSKG-----VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF-RDVCGSAFYV 60
CH + V+HRDLKP N K +K DFGL+ + F + G+ +Y+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI 119
+PE + R Y +++DIWS G +LY L +PPF A + + + +IR+G+ F+ P+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPYRY- 240
Query: 120 SSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
S E++ RML R + ++LE+P + E
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPFWA-------DTDEGIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + GI + +++ I+
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L++
Sbjct: 278 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 338 DPSDEPIAEA 347
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPF----WADTDE---GIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + D GI + +++ I+
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 259
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
PW P S A +L+ +MLT +P KRI Q L HP+L +
Sbjct: 260 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYY 319
Query: 155 EASDKPIDTA 164
+ SD+PI A
Sbjct: 320 DPSDEPIAEA 329
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF++ ++ K + E L +AF+ FD+D + I+ EL N+G+ D
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMT--NLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D D DG I+Y+EF MM
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 43/205 (20%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHSKG+MHRD+KP N + + + L+ ID+GL+ F +E+ S ++
Sbjct: 142 LKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRYFK 199
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E ++ +
Sbjct: 200 GPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYL 259
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
+K ID +DP W ++S A +L+ ++L D ++R+TA
Sbjct: 260 KKYHID--LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 317
Query: 143 QVLEHPWLKESGEASDKP-IDTAVL 166
+ +EHP+ + +P D AVL
Sbjct: 318 EAMEHPYFYPVVKEQSQPSADNAVL 342
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 16/171 (9%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE-GKEFRDVC-GSAFYVAP 62
+ HS G++HRD+KP+N L D++ LK DFG + ++E G D G+ Y++P
Sbjct: 188 DAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISP 244
Query: 63 EVLRRR-----YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDP 115
EVL+ + YG+E D WS GV L+ +L G PF+AD+ G + +I K + F D
Sbjct: 245 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED- 303
Query: 116 WPVISSSAKELVRRMLTQDPKK--RITAAQVLEHPWLKESGEASDKPIDTA 164
IS AK L+ LT + R ++ +HP+ K D +TA
Sbjct: 304 -AEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETA 353
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV--FIEEGKEFRDVCGSAFYVAPEVL 65
HSKG+++RDLK +N L D++ +K DFG+ + + K CG+ Y+APE+L
Sbjct: 135 HSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPEIL 190
Query: 66 R-RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP-WPVISSSA 123
++Y D WS GV+LY +L G PF +E +F IR +D P W + A
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR---MDNPFYPRW--LEKEA 245
Query: 124 KELVRRMLTQDPKKRITA-AQVLEHPWLKE 152
K+L+ ++ ++P+KR+ + +HP +E
Sbjct: 246 KDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 7 CHSKG-----VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF-RDVCGSAFYV 60
CH + V+HRDLKP N K +K DFGL+ + F + G+ +Y+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI 119
+PE + R Y +++DIWS G +LY L +PPF A + + + +IR+G+ F+ P+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPYRY- 240
Query: 120 SSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
S E++ RML R + ++LE+P + E
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + L ++I + K+ F+ D D G ++ EL + LG E +++ + D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 246 NGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD--- 301
NGTID+ EF+ ++ K + E L +AF+ FDKD + +I+ EL N+G+
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TNLGEKLT 118
Query: 302 DATIKEIMSEVDRDKDGRISYDEFCAMM 329
D + E++ E D D DG+I+Y+EF +M
Sbjct: 119 DEEVDEMIREADVDGDGQINYEEFVKVM 146
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ ++LK+ F D D++G +S EL+ + LG L + +V + ++ AD+DG+G I+Y
Sbjct: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
Query: 252 IEFITATMQR 261
EF+ M +
Sbjct: 140 EEFVKVMMAK 149
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 31/175 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CH + V+HRDLKP+N L + E LK DFGL+ F +++ + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFW----ADTDEGIFE--------------EIR 105
++Y DIWS G I ++ G P F AD IF E+
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 106 KGEIDFQI-DPWPV------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKES 153
K + +F + +P P + S +L+ +ML DP +RITA Q LEH + KE+
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 31/175 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CH + V+HRDLKP+N L + E LK DFGL+ F +++ + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFW----ADTDEGIFE--------------EIR 105
++Y DIWS G I ++ G P F AD IF E+
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 106 KGEIDFQI-DPWPV------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKES 153
K + +F + +P P + S +L+ +ML DP +RITA Q LEH + KE+
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 31/175 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CH + V+HRDLKP+N L + E LK DFGL+ F +++ + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL 172
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFW----ADTDEGIFE--------------EIR 105
++Y DIWS G I ++ G P F AD IF E+
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 106 KGEIDFQI-DPWPV------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKES 153
K + +F + +P P + S +L+ +ML DP +RITA Q LEH + KE+
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
H +G+++RDLK +N + D +K DFG+ + +G R+ CG+ Y+APE++
Sbjct: 137 HKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 67 -RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ YGK D W+ GV+LY +L G PPF + ++ +F+ I + + + +S A
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVS 249
Query: 126 LVRRMLTQDPKKRITAA 142
+ + ++T+ P KR+
Sbjct: 250 ICKGLMTKHPAKRLGCG 266
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 161 IDTAVLFRMKQFMAMNXXXXXXXXVIVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKA 220
ID VL K + M +I + ++QKLK F +D + G ++ +L+
Sbjct: 20 IDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRK 79
Query: 221 GLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKD 280
GL + G L + + D DG+G IDY EF+ A + R +L + + + AF+ FD D
Sbjct: 80 GLERSGLMLPP-NFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVD 137
Query: 281 NDRYITVDELETAFKEYNMGDDAT------IKEIMSEVDRDKDGRISYDEFCAMMK 330
ND IT EL N + T +K+++ EVD++ DG+I + EF MMK
Sbjct: 138 NDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFC 326
+ E + E D D DG+++Y+EF
Sbjct: 119 EEVDEXIREADIDGDGQVNYEEFV 142
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVL 65
HS G+++RDLKPEN L DE +K DFGLS I+ K+ CG+ Y+APEV+
Sbjct: 146 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 66 RRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ + AD WS GV+++ +L G PF + I K ++ +S+ A+
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP----QFLSTEAQ 258
Query: 125 ELVRRMLTQDPKKRITAA 142
L+R + ++P R+ +
Sbjct: 259 SLLRALFKRNPANRLGSG 276
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL LG E +++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDATI 305
GTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL N+G+ T
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTD 119
Query: 306 KEI---MSEVDRDKDGRISYDEFC 326
+E+ + E D D DG+++Y+EF
Sbjct: 120 EEVDQXIREADIDGDGQVNYEEFV 143
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVL- 65
H + ++HRD+KP N L E+ +K DFG+S F + G+ ++APE L
Sbjct: 154 HYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLS 210
Query: 66 --RRRY-GKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R+ + GK D+W+ GV LY + G PF + + +I+ ++F P I+
Sbjct: 211 ETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP--DQPDIAED 268
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
K+L+ RML ++P+ RI ++ HPW+
Sbjct: 269 LKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 19/156 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H + +++RDLKPEN L D++ ++ D GL+V + EG+ + G+ Y+APEV++
Sbjct: 303 HRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 68 -RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWP-----VISS 121
RY D W+ G +LY ++ G PF ++I++ E++ + P S
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRK-----KKIKREEVERLVKEVPEEYSERFSP 414
Query: 122 SAKELVRRMLTQDPKKRI-----TAAQVLEHPWLKE 152
A+ L ++L +DP +R+ +A +V EHP K+
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFR--DVCGSAFYVAP 62
+ HS G +HRD+KP+N L D++ LK DFG + + + R G+ Y++P
Sbjct: 182 DAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
Query: 63 EVLRRR-----YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDP 115
EVL+ + YG+E D WS GV LY +L G PF+AD+ G + +I K + F D
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD- 297
Query: 116 WPVISSSAKELVRRMLT 132
IS AK L+ LT
Sbjct: 298 -NDISKEAKNLICAFLT 313
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFR--DVCGSAFYVAP 62
+ HS G +HRD+KP+N L D++ LK DFG + + + R G+ Y++P
Sbjct: 187 DAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 63 EVLRRR-----YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDP 115
EVL+ + YG+E D WS GV LY +L G PF+AD+ G + +I K + F D
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD- 302
Query: 116 WPVISSSAKELVRRMLT 132
IS AK L+ LT
Sbjct: 303 -NDISKEAKNLICAFLT 318
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 19/156 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H + +++RDLKPEN L D++ ++ D GL+V + EG+ + G+ Y+APEV++
Sbjct: 303 HRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 68 -RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWP-----VISS 121
RY D W+ G +LY ++ G PF ++I++ E++ + P S
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRK-----KKIKREEVERLVKEVPEEYSERFSP 414
Query: 122 SAKELVRRMLTQDPKKRI-----TAAQVLEHPWLKE 152
A+ L ++L +DP +R+ +A +V EHP K+
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 15/151 (9%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL--RR 67
K ++HRD+K EN + E+ +K IDFG + ++E GK F CG+ Y APEVL
Sbjct: 149 KDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNP 205
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
G E ++WS GV LY L+ +E F E+ + ++ I P ++S LV
Sbjct: 206 YRGPELEMWSLGVTLYTLV---------FEENPFCELEE-TVEAAIHPPYLVSKELMSLV 255
Query: 128 RRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
+L P++R T +++ PW+ + +D
Sbjct: 256 SGLLQPVPERRTTLEKLVTDPWVTQPVNLAD 286
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFR--DVCGSAFYVAP 62
+ HS G +HRD+KP+N L D++ LK DFG + + + R G+ Y++P
Sbjct: 187 DAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 63 EVLRRR-----YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--RKGEIDFQIDP 115
EVL+ + YG+E D WS GV LY +L G PF+AD+ G + +I K + F D
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD- 302
Query: 116 WPVISSSAKELVRRMLT 132
IS AK L+ LT
Sbjct: 303 -NDISKEAKNLICAFLT 318
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 43/205 (20%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWLKESGEASDKPI-DTAVL 166
+ +EHP+ + +P D AVL
Sbjct: 317 EAMEHPYFYPVVKEQSQPCADNAVL 341
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHSKG+MHRD+KP N + + + L+ ID+GL+ F +E+ S ++
Sbjct: 147 LKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRYFK 204
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E ++ +
Sbjct: 205 GPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYL 264
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
+K ID +DP W ++S A +L+ ++L D ++R+TA
Sbjct: 265 KKYHID--LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 322
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 323 EAMEHPYF 330
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 185 VIVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADID 244
+I + +++KLK F +D D G ++ ++LK GL K G L + + D D
Sbjct: 41 IIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKL-PYNFDLLLDQIDSD 99
Query: 245 GNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT 304
G+G IDY EFI A + R +L + + + AF+ FD DND IT EL N + T
Sbjct: 100 GSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNIT 158
Query: 305 ------IKEIMSEVDRDKDGRISYDEFCAMMK 330
+K ++ +VD++ DG+I + EF MMK
Sbjct: 159 QRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
L E+ Q++++ F DTD SGT+ ELK + LG ++ ++K+ + D DG+GT
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 249 IDYIEFIT-ATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEY--NMGDDATI 305
ID+ EF+ T + + + E + KAF+ FD D I+ L+ KE NM D+ +
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEE-L 119
Query: 306 KEIMSEVDRDKDGRISYDEFCAMMKR 331
+E++ E DRD DG ++ +EF +MK+
Sbjct: 120 QEMIDEADRDGDGEVNEEEFFRIMKK 145
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 35/181 (19%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS ++HRD+KPEN L + ++ V+K DFG + G+ + D + +Y APE+L
Sbjct: 140 CHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELL 196
Query: 66 RR--RYGKEADIWSAGVILYILLCGVPPFWADTD------------------------EG 99
+YGK D+W+ G ++ + G P F D+D
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256
Query: 100 IFEEIRKGEIDFQIDP----WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+F +R EI + +P +P +S +L ++ L DP KR A++L H + + G
Sbjct: 257 VFAGVRLPEIK-EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGF 315
Query: 156 A 156
A
Sbjct: 316 A 316
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+I K+ F D D G ++ +EL + L E +++ + D DGNGTI
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 250 DYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATI 305
++ EF++ ++ K + E L +AF+ FDKD + YI+ EL N+G+ D +
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEV 121
Query: 306 KEIMSEVDRDKDGRISYDEFCAMM 329
++++ E D D DG+++Y+EF MM
Sbjct: 122 EQMIKEADLDGDGQVNYEEFVKMM 145
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++LK+ F D D++G +S EL+ + LG L + +V+Q ++ AD+DG+G ++Y EF+
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 142
Query: 256 TATM 259
M
Sbjct: 143 KMMM 146
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 272 KAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYDEFCAMMK 330
+AF FDKD D ITV+EL T + + + +++++SEVD D +G I +DEF ++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 331 R 331
+
Sbjct: 74 K 74
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GTI++ EF+T + K + E + +AF+ FDKD + YI+ EL N+G+ D
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEF 325
+ E + E D D DG+++Y+EF
Sbjct: 119 EEVDEXIREADIDGDGQVNYEEF 141
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +++++ F D D +G +S EL+ LG L + +V + ++ ADIDG+G ++Y
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNY 138
Query: 252 IEFI 255
EF+
Sbjct: 139 EEFV 142
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 34/176 (19%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CH ++HRDLKP+N L S + LK DFGL+ F + + + +Y AP+VL
Sbjct: 135 CHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL 191
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI------------------- 104
++Y DIWS G I ++ G P F TD+ +I
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 105 ----RKGEIDFQIDPW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
R ++ F+ PW P +L+ ML DP KRI+A + HP+ K+
Sbjct: 252 LWKQRTFQV-FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 34/176 (19%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CH ++HRDLKP+N L S + LK DFGL+ F + + + +Y AP+VL
Sbjct: 135 CHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL 191
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI------------------- 104
++Y DIWS G I ++ G P F TD+ +I
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 105 ----RKGEIDFQIDPW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
R ++ F+ PW P +L+ ML DP KRI+A + HP+ K+
Sbjct: 252 LWKQRTFQV-FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 36/187 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPE 63
HS V+HRDLKP N L + + LK DFGL+ + + + + +Y APE
Sbjct: 161 HSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPFWA-------DTDEGIFEEIRKGEIDFQID 114
++ + Y K DIWS G IL +L P F + GI + +++ I+
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 115 ----------------PW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
W P S A +L+ RMLT +P KRIT + L HP+L++
Sbjct: 278 MKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYY 337
Query: 155 EASDKPI 161
+ +D+P+
Sbjct: 338 DPTDEPV 344
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N L E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
NL E+I + K+ F D D +G++S EL + LG + E +V M D+DGN
Sbjct: 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 63
Query: 249 IDYIEFITATMQRHKLERFEH-LDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DAT 304
I++ EF+ ++ K E L +AF+ FDK+ D I+ EL+ ++G+ DA
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL--TSIGEKLTDAE 121
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKR----GTQRRGFASRSLA 344
+ +++ EV D G I+ +F A++ + GT+R+ ++ LA
Sbjct: 122 VDDMLREVS-DGSGEINIQQFAALLSKGSSTGTRRKALRNKILA 164
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 197
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 258 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 316 EAMEHPYF 323
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 139 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 196
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 197 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 256
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 257 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 314
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 315 EAMEHPYF 322
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 197
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 258 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 316 EAMEHPYF 323
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 259 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 317 EAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 42/188 (22%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS G+MHRD+KP N + E+ L+ ID+GL+ F G+E+ S ++
Sbjct: 146 LKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 203
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G +L ++ PF+ D E +++ I
Sbjct: 204 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 263
Query: 105 RKGEIDFQIDP-------------WP---------VISSSAKELVRRMLTQDPKKRITAA 142
K I ++DP W ++S A + + ++L D + R+TA
Sbjct: 264 DKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 321
Query: 143 QVLEHPWL 150
+ +EHP+
Sbjct: 322 EAMEHPYF 329
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+NL E+I + K+ F D D SG++S EL + LG + E +V M D+DGN
Sbjct: 3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNH 62
Query: 248 TIDYIEFITATMQRHKLERFEH-LDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
I++ EF+ ++ K E L +AF+ FDK+ D I+ EL+ ++G+ DA
Sbjct: 63 AIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVL--TSIGEKLTDA 120
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMMKR 331
+ E++ EV D G I+ +F A++ +
Sbjct: 121 EVDEMLREV-SDGSGEINIKQFAALLSK 147
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D G ++ +L + LG E +++ + DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 248 TIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DA 303
TID+ +F+T ++ K + E + +AF+ F KD + YI+ +L N+G+ D
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMT--NLGEKLTDE 420
Query: 304 TIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ E D DG+++Y++F MM
Sbjct: 421 EVDEMIREAGIDGDGQVNYEQFVQMM 446
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 136 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 193
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 253
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 254 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 313
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 314 MTHPYFQQVRAAEN 327
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 136 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 193
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 253
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 254 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 313
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 314 MTHPYFQQVRAAEN 327
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 313 MTHPYFQQVRAAEN 326
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 80/185 (43%), Gaps = 39/185 (21%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKD--ENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYV 60
N CHS+ +HRDLKP+N L + D E VLK DFGL+ F ++F + +Y
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYR 204
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----GIFEEIRKGEIDFQID 114
PE+L R Y DIWS I +L P F D++ IFE + G D
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL--GLPDDTT- 261
Query: 115 PWPVISS-----------SAKELVR---------------RMLTQDPKKRITAAQVLEHP 148
WP +++ K L R ML DP KRI+A LEHP
Sbjct: 262 -WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP 320
Query: 149 WLKES 153
+ +
Sbjct: 321 YFSHN 325
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + VLK IDFG + + G+ S +Y APE++
Sbjct: 158 HSIGICHRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFG 215
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADT--DEGI----------FEEIRKGEIDF-- 111
Y DIWS G ++ L+ G P F ++ D+ + E+I+ ++
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME 275
Query: 112 ----QIDPWPV-------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE--SGEA 156
QI P P A +L+ R+L P R+TA + L HP+ E +GEA
Sbjct: 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEA 333
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 137 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 194
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 195 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 254
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 255 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 314
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 315 MTHPYFQQVRAAEN 328
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
SKG+++RDLK +N + D +K DFG+ I +G + CG+ Y+APE++
Sbjct: 459 QSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 515
Query: 67 -RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ YGK D W+ GV+LY +L G PF + ++ +F+ I + + + +S A
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVA 571
Query: 126 LVRRMLTQDPKKRITAA 142
+ + ++T+ P KR+
Sbjct: 572 ICKGLMTKHPGKRLGCG 588
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPEVLR 66
SKG+++RDLK +N + D +K DFG+ I +G + CG+ Y+APE++
Sbjct: 138 QSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
+ YGK D W+ GV+LY +L G PF + ++ +F+ I + + + +S A
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVA 250
Query: 126 LVRRMLTQDPKKRITAA 142
+ + ++T+ P KR+
Sbjct: 251 ICKGLMTKHPGKRLGCG 267
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 192
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFE 102
PE+L + Y D+WS G + ++ PF+ D ++
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 103 EIRKGEIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
+ E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 253 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 312
Query: 145 LEHPWLKE 152
+ HP+ ++
Sbjct: 313 MTHPYFQQ 320
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + CHS+G+MHRD+KP N + E L+ ID+GL+ F GKE+ S ++
Sbjct: 156 LKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 213
Query: 61 APEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTD--------------EGIFEEI 104
PE+L + Y D+WS G + ++ PF+ D +G+ +
Sbjct: 214 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYL 273
Query: 105 RKG--EIDFQID---------PW---------PVISSSAKELVRRMLTQDPKKRITAAQV 144
K E+D Q++ PW ++S A + + ++L D ++R+TA +
Sbjct: 274 NKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEA 333
Query: 145 LEHPWLKESGEASD 158
+ HP+ ++ A +
Sbjct: 334 MTHPYFQQVRAAEN 347
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 73/183 (39%), Gaps = 44/183 (24%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CH ++HRDLKP+N L + + LK DFGL+ F F + +Y AP+VL
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVL 180
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP----WPVI 119
R Y DIWS G IL ++ G P F D EE K D P WP +
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND----EEQLKLIFDIMGTPNESLWPSV 236
Query: 120 SSSAK------------------------------ELVRRMLTQDPKKRITAAQVLEHPW 149
+ K + + +L +P R++A Q L HPW
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
Query: 150 LKE 152
E
Sbjct: 297 FAE 299
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 23/169 (13%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEG----KEFRDVCGSAFYV 60
N H G++HRD+KP N + ++ NAV K +DFG++ I + + V G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGI-FEEIRKGEIDFQIDPWPV 118
+PE R +D++S G +LY +L G PPF D+ + + ++ +R+ DP P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE-------DPIPP 239
Query: 119 ------ISSSAKELVRRMLTQDPKKRI-TAAQVLEHPWLKESGEASDKP 160
+S+ +V + L ++P+ R TAA++ +GE + P
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 23/169 (13%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEG----KEFRDVCGSAFYV 60
N H G++HRD+KP N L ++ NAV K +DFG++ I + + V G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANILISAT--NAV-KVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGI-FEEIRKGEIDFQIDPWPV 118
+PE R +D++S G +LY +L G PPF D+ + ++ +R+ DP P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------DPIPP 239
Query: 119 ------ISSSAKELVRRMLTQDPKKRI-TAAQVLEHPWLKESGEASDKP 160
+S+ +V + L ++P+ R TAA++ +GE + P
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
+ +EI++L ++F ++D D SG+LS +E + L + V++ + D DGNG +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEV 56
Query: 250 DYIEFITATMQRH-KLERFEHLDKAFQYFDKDNDRYITVDELETAFKEY--NMGDDATIK 306
D+ EFI Q K ++ + L AF+ +D D D YI+ EL K N D ++
Sbjct: 57 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 116
Query: 307 EIMSEV----DRDKDGRISYDEFCAMM 329
+I+ + D+D DGRIS++EFCA++
Sbjct: 117 QIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + +EI++L ++F ++D D SG+LS +E + L + V++ + D DG
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDG 66
Query: 246 NGTIDYIEFITATMQRH-KLERFEHLDKAFQYFDKDNDRYITVDELETAFKEY--NMGDD 302
NG +D+ EFI Q K ++ + L AF+ +D D D YI+ EL K N D
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 126
Query: 303 ATIKEIMSEV----DRDKDGRISYDEFCAMM 329
+++I+ + D+D DGRIS++EFCA++
Sbjct: 127 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E++ + K+ F+ D D G ++ EL + LG E +++ M D DGN
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 247 GTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---D 302
GT+D+ EF+ ++ K + E + +AF+ FDKD + +++ EL +G+ D
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVM--TRLGEKLSD 118
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMM 329
+ E++ D D DG+++Y+EF ++
Sbjct: 119 EEVDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++MSE+DRD +G + +
Sbjct: 7 EQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLGMMAR 74
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 186 IVENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
+ + +EI++L ++F ++D D SG+LS +E + L + V++ + D DG
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDG 65
Query: 246 NGTIDYIEFITATMQRH-KLERFEHLDKAFQYFDKDNDRYITVDELETAFKEY--NMGDD 302
NG +D+ EFI Q K ++ + L AF+ +D D D YI+ EL K N D
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 125
Query: 303 ATIKEIMSEV----DRDKDGRISYDEFCAMM 329
+++I+ + D+D DGRIS++EFCA++
Sbjct: 126 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E I + K F D D G +S EL + LG T + ++ ++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 250 DYIEFITATMQRHKLE----RFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDAT 304
D+ EF+ +++ K + E L + F+ FD++ D YI +EL F+ D
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMK 330
I+ +M + D++ DGRI +DEF MM+
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 273 AFQYFDKDNDRYITVDELETAFKEYNMGDDATIKE---IMSEVDRDKDGRISYDEFCAMM 329
AF FD D I+V EL T + +G T +E I+ EVD D G I ++EF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMR--MLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 330 KR 331
R
Sbjct: 80 VR 81
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
+EI++L ++F ++D D SG+LS +E + L + V++ + D DGNG +D+
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDF 57
Query: 252 IEFITATMQRH-KLERFEHLDKAFQYFDKDNDRYITVDELETAFKEY--NMGDDATIKEI 308
EFI Q K ++ + L AF+ +D D D YI+ EL K N D +++I
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 117
Query: 309 MSEV----DRDKDGRISYDEFCAMM 329
+ + D+D DGRIS++EFCA++
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVV 142
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
+ K + HRD+KP N L D+N +K DFG S ++ + K+ + G+ ++ PE
Sbjct: 169 NEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVD-KKIKGSRGTYEFMPPEFFSN 224
Query: 68 RY---GKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRKGEIDFQIDP----WPV- 118
G + DIWS G+ LY++ V PF +F IR I++ +D +P+
Sbjct: 225 ESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLT 284
Query: 119 ----------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESG 154
+S+ + ++ L ++P +RIT+ L+H WL ++
Sbjct: 285 NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN 330
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVC-GSAFYVAPEVL 65
H +HRD+KP+N L D N ++ DFG + +E+G V G+ Y++PE+L
Sbjct: 192 HQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 248
Query: 66 ------RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV- 118
+ RYG E D WS GV +Y +L G PF+A++ + +I + FQ P V
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF-PTQVT 307
Query: 119 -ISSSAKELVRRMLT 132
+S +AK+L+RR++
Sbjct: 308 DVSENAKDLIRRLIC 322
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E I + K F D D G +S EL + LG T + ++ ++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 250 DYIEFITATMQRHKLE----RFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDAT 304
D+ EF+ +++ K + E L + F+ FD++ D YI +EL F+ D
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMK 330
I+ +M + D++ DGRI +DEF MM+
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 273 AFQYFDKDNDRYITVDELETAFKEYNMGDDATIKE---IMSEVDRDKDGRISYDEFCAMM 329
AF FD D I+V EL T + +G T +E I+ EVD D G I ++EF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMR--MLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 330 KRGTQR--RGFASRSLAHV 346
R + +G + LA +
Sbjct: 80 VRQMKEDAKGKSEEELAEL 98
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 173 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 230
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 279
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 280 QIREM---NPNYTEFKFPQIKAHPWTK 303
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 167 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 224
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 225 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 273
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 274 QIREM---NPNYTEFKFPQIKAHPWTK 297
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 218 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 275
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 276 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 324
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 325 QIREM---NPNYTEFKFPQIKAHPWTK 348
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 23/169 (13%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEG----KEFRDVCGSAFYV 60
N H G++HRD+KP N + ++ NAV K +DFG++ I + + V G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGI-FEEIRKGEIDFQIDPWPV 118
+PE R +D++S G +LY +L G PPF D+ + ++ +R+ DP P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------DPIPP 239
Query: 119 ------ISSSAKELVRRMLTQDPKKRI-TAAQVLEHPWLKESGEASDKP 160
+S+ +V + L ++P+ R TAA++ +GE + P
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 23/169 (13%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEG----KEFRDVCGSAFYV 60
N H G++HRD+KP N + ++ NAV K +DFG++ I + + V G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGI-FEEIRKGEIDFQIDPWPV 118
+PE R +D++S G +LY +L G PPF D+ + ++ +R+ DP P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------DPIPP 239
Query: 119 ------ISSSAKELVRRMLTQDPKKRI-TAAQVLEHPWLKESGEASDKP 160
+S+ +V + L ++P+ R TAA++ +GE + P
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 175 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 232
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 233 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 281
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 282 QIREM---NPNYTEFKFPQIKAHPWTK 305
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 173 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 279
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 280 QIREM---NPNYTEFKFPQIKAHPWTK 303
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 23/169 (13%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEG----KEFRDVCGSAFYV 60
N H G++HRD+KP N + ++ NAV K +DFG++ I + + V G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGI-FEEIRKGEIDFQIDPWPV 118
+PE R +D++S G +LY +L G PPF D+ + ++ +R+ DP P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------DPIPP 239
Query: 119 ------ISSSAKELVRRMLTQDPKKRI-TAAQVLEHPWLKESGEASDKP 160
+S+ +V + L ++P+ R TAA++ +GE + P
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 177 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 234
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 235 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 283
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 284 QIREM---NPNYTEFKFPQIKAHPWTK 307
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 144 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 201
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 202 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 250
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 251 QIREM---NPNYTEFKFPQIKAHPWTK 274
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 158 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 264
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 265 QIREM---NPNYTEFKFPQIKAHPWTK 288
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 151 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 257
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 258 QIREM---NPNYTEFKFPQIKAHPWTK 281
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 147 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 204
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 253
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 254 QIREM---NPNYTEFKFPQIKAHPWTK 277
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 152 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 258
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 259 QIREM---NPNYTEFKFPQIKAHPWTK 282
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 245
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 246 QIREM---NPNYTEFAFPQIKAHPWTK 269
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 245
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 246 QIREM---NPNYTEFAFPQIKAHPWTK 269
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 151 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 257
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 258 QIREM---NPNYTEFKFPQIKAHPWTK 281
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFR-DVCGSAFYVAPEVLR 66
HS V+HRD+K +N L + +K DFG I + R ++ G+ +++APEV+
Sbjct: 133 HSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVT 189
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ YG + DIWS G++ ++ G PP+ + ++ G + Q +P +S+ +
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ-NPEK-LSAIFR 247
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ + R L D +KR +A ++L+H +LK
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 143 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 249
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 250 QIREM---NPNYTEFKFPQIKAHPWTK 273
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 245
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 246 QIREM---NPNYTEFKFPQIKAHPWTK 269
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 7/147 (4%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
NL E+I + K+ F D D +G++S EL + LG + E +V M D+DGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 249 IDYIEFITATMQRHKLERFEH-LDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DAT 304
I++ EF+ ++ K E L +AF+ FDK+ D I+ EL+ ++G+ DA
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL--TSIGEKLTDAE 120
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKR 331
+ +++ EV D G I+ +F A++ +
Sbjct: 121 VDDMLREV-SDGSGEINIQQFAALLSK 146
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 140 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 246
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 247 QIREM---NPNYTEFKFPQIKAHPWTK 270
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 245
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 246 QIREM---NPNYTEFKFPQIKAHPWTK 269
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 245
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 246 QIREM---NPNYTEFKFPQIKAHPWTK 269
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 245
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 246 QIREM---NPNYTEFKFPQIKAHPWTK 269
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS G+ HRD+KP+N L + AVLK DFG + + G+ S +Y APE++
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D+WSAG +L LL G P F D+ EI K V+ + +E
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-----------VLGTPTRE 245
Query: 126 LVRRMLTQDPK-KRITAAQVLEHPWLK 151
+R M +P Q+ HPW K
Sbjct: 246 QIREM---NPNYTEFKFPQIKAHPWTK 269
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
CH + V+HRDLKP+N L + E LK DFGL+ K + + + +Y P++L
Sbjct: 116 CHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTDE-------------------GIF--E 102
Y + D+W G I Y + G P F T E GI E
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 103 EIR-----KGEIDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
E + K + + P + S +L+ ++L + + RI+A ++HP+ GE
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292
Query: 158 DKPIDTAVLFRMKQ 171
K DT +F +K+
Sbjct: 293 HKLPDTTSIFALKE 306
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPEVLR 66
HS V+HRD+K +N L + +K DFG I + R + G+ +++APEV+
Sbjct: 133 HSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 189
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ YG + DIWS G++ ++ G PP+ + ++ G + Q +P +S+ +
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ-NPEK-LSAIFR 247
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ + R L D +KR +A ++L+H +LK
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPEVLR 66
HS V+HRD+K +N L + +K DFG I + R + G+ +++APEV+
Sbjct: 133 HSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT 189
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ YG + DIWS G++ ++ G PP+ + ++ G + Q +P +S+ +
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ-NPEK-LSAIFR 247
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ + R L D +KR +A ++L+H +LK
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 23/153 (15%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEG----KEFRDVCGSAFYV 60
N H G++HRD+KP N + ++ NAV K +DFG++ I + + V G+A Y+
Sbjct: 147 NFSHQNGIIHRDVKPANIMISAT--NAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 61 APEVLRR-RYGKEADIWSAGVILYILLCGVPPFWADTDEGI-FEEIRKGEIDFQIDPWPV 118
+PE R +D++S G +LY +L G PPF D+ + ++ +R+ DP P
Sbjct: 204 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-------DPIPP 256
Query: 119 ------ISSSAKELVRRMLTQDPKKRI-TAAQV 144
+S+ +V + L ++P+ R TAA++
Sbjct: 257 SARHEGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 32/172 (18%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDV-CGSA 57
+ + H G++H DLKP NFL + +LK IDFG++ ++ +D G+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 58 FYVAPEVLR-----RRYG-------KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIR 105
Y+ PE ++ R G ++D+WS G ILY + G PF + I +I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQIS 275
Query: 106 KGEIDFQIDP-----WPVISSS-AKELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + IDP +P I +++++ L +DPK+RI+ ++L HP+++
Sbjct: 276 K--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E I + K F D D G +S EL + LG + ++ ++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 250 DYIEFITATMQRHKLE----RFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT- 304
D+ EF+ +++ K + E L+ F+ FDK+ D +I ++EL + G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILR--ATGEHVTE 131
Query: 305 --IKEIMSEVDRDKDGRISYDEFCAMMK 330
I+++M + D++ DGRI +DEF MM+
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 273 AFQYFDKDNDRYITVDELETAFKEYNMGDDATIKE---IMSEVDRDKDGRISYDEFCAMM 329
AF FD D I+ EL T + +G + T +E I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 330 KR 331
R
Sbjct: 83 VR 84
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E I + K F D D G +S EL + LG + ++ ++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 250 DYIEFITATMQRHKLE----RFEHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDD 302
D+ EF+ +++ K + E L F+ FDK+ D +I ++EL + E+ + +D
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 303 ATIKEIMSEVDRDKDGRISYDEFCAMMK 330
I+++M + D++ DGRI +DEF MM+
Sbjct: 134 --IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 273 AFQYFDKDNDRYITVDELETAFKEYNMGDDATIKE---IMSEVDRDKDGRISYDEFCAMM 329
AF FD D I+ EL T + +G + T +E I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 330 KRGTQR--RGFASRSLAH 345
R + +G + LA+
Sbjct: 83 VRQMKEDAKGKSEEELAN 100
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 32/172 (18%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDV-CGSA 57
+ + H G++H DLKP NFL + +LK IDFG++ ++ +D G+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 58 FYVAPEVLR-----RRYG-------KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIR 105
Y+ PE ++ R G ++D+WS G ILY + G PF + I +I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQIS 275
Query: 106 KGEIDFQIDP-----WPVISSS-AKELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + IDP +P I +++++ L +DPK+RI+ ++L HP+++
Sbjct: 276 K--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPEVLR 66
HS V+HRD+K +N L + +K DFG I + R + G+ +++APEV+
Sbjct: 134 HSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVT 190
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ YG + DIWS G++ ++ G PP+ + ++ G + Q +P +S+ +
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ-NPEK-LSAIFR 248
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ + R L D +KR +A ++++H +LK
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 32/172 (18%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDV-CGSA 57
+ + H G++H DLKP NFL + +LK IDFG++ ++ +D G+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 58 FYVAPEVLR-----RRYG-------KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIR 105
Y+ PE ++ R G ++D+WS G ILY + G PF + I +I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQIS 275
Query: 106 KGEIDFQIDP-----WPVISSS-AKELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + IDP +P I +++++ L +DPK+RI+ ++L HP+++
Sbjct: 276 K--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS V+HRDLKP+N L TS + +K DFGL+ V + +Y APEV L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI-----RKGEIDFQID------- 114
Y D+WS G I + P F +D +I GE D+ D
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 115 -----PWPV------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
P+ I K+L+ + LT +P KRI+A L HP+ ++
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 24/164 (14%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPE 63
N H +G+++RDLK +N L D +K D+G+ + G CG+ Y+APE
Sbjct: 167 NYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223
Query: 64 VLRRR-YGKEADIWSAGVILYILLCGVPPF---------WADTDEGIFEEIRKGEIDFQI 113
+LR YG D W+ GV+++ ++ G PF +T++ +F+ I ++ QI
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI----LEKQI 279
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITA------AQVLEHPWLK 151
+S A +++ L +DPK+R+ A + HP+ +
Sbjct: 280 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E I + K F D D G +S EL + LG + ++ ++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 250 DYIEFITATMQRHKLE----RFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT- 304
D+ EF+ +++ K + E L F+ FDK+ D +I ++EL + G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT--GEHVTE 131
Query: 305 --IKEIMSEVDRDKDGRISYDEFCAMMK 330
I+++M + D++ DGRI +DEF MM+
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 273 AFQYFDKDNDRYITVDELETAFKEYNMGDDATIKE---IMSEVDRDKDGRISYDEFCAMM 329
AF FD D I+ EL T + +G + T +E I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 330 KRGTQR--RGFASRSLAH 345
R + +G + LA+
Sbjct: 83 VRQMKEDAKGKSEEELAN 100
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 89/228 (39%), Gaps = 72/228 (31%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS--------------VFIEE 46
+ V HS G++HRD+KP N L ++ +K DFGLS + I E
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILLNAE---CHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 47 GKE--------FRDVCGSAFYVAPEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADT 96
E D + +Y APE+L +Y K D+WS G IL +LCG P F +
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235
Query: 97 DEGIFEEIRKGEIDF--------------------------------------------Q 112
E I G IDF +
Sbjct: 236 TMNQLERI-IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 113 IDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
I+P + A +L+ ++L +P KRI+A L+HP++ +++P
Sbjct: 295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS V+HRDLKP+N L TS + +K DFGL+ V + +Y APEV L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI-----RKGEIDFQID------- 114
Y D+WS G I + P F +D +I GE D+ D
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 115 -----PWPV------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
P+ I K+L+ + LT +P KRI+A L HP+ ++
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 18/166 (10%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPE 63
N H ++HRDLK N LFT + +K DFG+S + RD G+ +++APE
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 64 VLR------RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP-- 115
V+ R Y +AD+WS G+ L + PP + +I K E P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 116 WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPI 161
W SS+ K+ +++ L ++ R T +Q+L+HP++ S+KPI
Sbjct: 266 W---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 24/164 (14%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPE 63
N H +G+++RDLK +N L D +K D+G+ + G CG+ Y+APE
Sbjct: 135 NYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 191
Query: 64 VLRRR-YGKEADIWSAGVILYILLCGVPPF---------WADTDEGIFEEIRKGEIDFQI 113
+LR YG D W+ GV+++ ++ G PF +T++ +F+ I ++ QI
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI----LEKQI 247
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITA------AQVLEHPWLK 151
+S A +++ L +DPK+R+ A + HP+ +
Sbjct: 248 RIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 32/172 (18%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDV-CGSA 57
+ + H G++H DLKP NFL + +LK IDFG++ ++ +D G+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 58 FYVAPEVLR-----RRYG-------KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIR 105
Y+ PE ++ R G ++D+WS G ILY + G PF + I +I
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQIS 228
Query: 106 KGEIDFQIDP-----WPVISSS-AKELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + IDP +P I +++++ L +DPK+RI+ ++L HP+++
Sbjct: 229 K--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 18/166 (10%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPE 63
N H ++HRDLK N LFT + +K DFG+S + RD G+ +++APE
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 64 VLR------RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP-- 115
V+ R Y +AD+WS G+ L + PP + +I K E P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 116 WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPI 161
W SS+ K+ +++ L ++ R T +Q+L+HP++ S+KPI
Sbjct: 266 W---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 18/166 (10%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-CGSAFYVAPE 63
N H ++HRDLK N LFT + +K DFG+S + RD G+ +++APE
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 64 VLR------RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP-- 115
V+ R Y +AD+WS G+ L + PP + +I K E P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 116 WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPI 161
W SS+ K+ +++ L ++ R T +Q+L+HP++ S+KPI
Sbjct: 266 W---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E I + K F D D G +S EL + LG + ++ ++ D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 250 DYIEFITATMQRHKLE----RFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT- 304
D+ EF+ +++ K + E L F+ FDK+ D +I ++EL + G+ T
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT--GEHVTE 128
Query: 305 --IKEIMSEVDRDKDGRISYDEFCAMMK 330
I+++M + D++ DGRI +DEF MM+
Sbjct: 129 EDIEDLMKDSDKNNDGRIDFDEFLKMME 156
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 273 AFQYFDKDNDRYITVDELETAFKEYNMGDDATIKE---IMSEVDRDKDGRISYDEFCAMM 329
AF FD D I+ EL T + +G + T +E I+ EVD D G I ++EF MM
Sbjct: 22 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 330 KRGTQR--RGFASRSLAH 345
R + +G + LA+
Sbjct: 80 VRQMKEDAKGKSEEELAN 97
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 32/172 (18%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDV-CGSA 57
+ + H G++H DLKP NFL + +LK IDFG++ ++ +D G+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 58 FYVAPEVLR-----RRYG-------KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIR 105
Y+ PE ++ R G ++D+WS G ILY + G PF + I +I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQIS 247
Query: 106 KGEIDFQIDP-----WPVISSS-AKELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + IDP +P I +++++ L +DPK+RI+ ++L HP+++
Sbjct: 248 K--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 32/172 (18%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDV-CGSA 57
+ + H G++H DLKP NFL + +LK IDFG++ ++ +D G+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 58 FYVAPEVLR-----RRYG-------KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIR 105
Y+ PE ++ R G ++D+WS G ILY + G PF + I +I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQIS 247
Query: 106 KGEIDFQIDP-----WPVISSS-AKELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + IDP +P I +++++ L +DPK+RI+ ++L HP+++
Sbjct: 248 K--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPE 63
N H +G+++RDLK +N L D +K D+G+ + G CG+ Y+APE
Sbjct: 120 NYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 176
Query: 64 VLRRR-YGKEADIWSAGVILYILLCGVPPF---------WADTDEGIFEEIRKGEIDFQI 113
+LR YG D W+ GV+++ ++ G PF +T++ +F+ I + +I
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 236
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITA------AQVLEHPWLK 151
+S A +++ L +DPK+R+ A + HP+ +
Sbjct: 237 S----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS V+HRDLKP+N L TS + +K DFGL+ V + +Y APEV L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI-----RKGEIDFQID------- 114
Y D+WS G I + P F +D +I GE D+ D
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 115 -----PWPV------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
P+ I K+L+ + LT +P KRI+A L HP+ +
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+I + K F + D + +G ++ EL + LG E +++ + A+ + NG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 250 DYIEFI-TATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATI 305
++ EF Q + + E + +AF+ FD+D D +I+ EL F N+G+ D I
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELR--FVMINLGEKVTDEEI 121
Query: 306 KEIMSEVDRDKDGRISYDEFCAMMKR 331
E++ E D D DG I+Y+EF M+ +
Sbjct: 122 DEMIREADFDGDGMINYEEFVWMISQ 147
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
+++++ F D D G +S EL+ + LG + + ++ + ++ AD DG+G I+Y EF+
Sbjct: 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
Query: 256 TATMQR 261
Q+
Sbjct: 143 WMISQK 148
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAI--DFGLSVFIEEGKEF----RDVCGSAFYVA 61
HS ++HRDLKP N L + + + +KA+ DFGL + G+ V G+ ++A
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 62 PEVL----RRRYGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPW 116
PE+L + DI+SAG + Y ++ G PF + +D + P
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDC-LHPE 253
Query: 117 PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
A+EL+ +M+ DP+KR +A VL+HP+
Sbjct: 254 KHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 36/183 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 171 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 225
Query: 68 --RYGKEADIWSAGVILYILLCGVPPFWADTDE----------------GIFEEIRKGEI 109
Y DIWS G I+ LL G F TD + + E
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGRTLF-PGTDHINQLQQIMRLTGTPPASVISRMPSHEA 284
Query: 110 DFQIDPWPVI------------SSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I+ P + + A +L+ +ML D KRITA++ L HP+ + +
Sbjct: 285 RNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPD 344
Query: 158 DKP 160
D+P
Sbjct: 345 DEP 347
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV-FIEEGKEFRDVCGSAFYVAPE 63
N H +G+++RDLK +N L D +K D+G+ + G CG+ Y+APE
Sbjct: 124 NYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 180
Query: 64 VLRRR-YGKEADIWSAGVILYILLCGVPPF---------WADTDEGIFEEIRKGEIDFQI 113
+LR YG D W+ GV+++ ++ G PF +T++ +F+ I + +I
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 240
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITA------AQVLEHPWLK 151
+S A +++ L +DPK+R+ A + HP+ +
Sbjct: 241 S----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E I + K F D D G +S EL + LG + ++ ++ D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 250 DYIEFITATMQRHKLE----RFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT- 304
D+ EF+ +++ K + E L F+ FDK+ D +I ++EL + G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILR--ATGEHVTE 131
Query: 305 --IKEIMSEVDRDKDGRISYDEFCAMMK 330
I+++M + D++ DGRI +DEF MM+
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 273 AFQYFDKDNDRYITVDELETAFKEYNMGDDATIKE---IMSEVDRDKDGRISYDEFCAMM 329
AF FD D I+ EL T + +G + T +E I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 330 KR 331
R
Sbjct: 83 VR 84
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 193 EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYI 252
E+ Q++++ F D D +GT+ ELK + LG ++ ++K+ + D +G G +++
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 253 EFITATMQR-HKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEY--NMGDDATIKEIM 309
+F+T Q+ + + E + KAF+ FD D I+ L+ KE N+ D+ ++E++
Sbjct: 63 DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-LQEMI 121
Query: 310 SEVDRDKDGRISYDEFCAMMKR 331
E DRD DG +S EF +MK+
Sbjct: 122 DEADRDGDGEVSEQEFLRIMKK 143
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 32/172 (18%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDV-CGSA 57
+ + H G++H DLKP NFL + +LK IDFG++ ++ +D G+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 58 FYVAPEVLR-----RRYG-------KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIR 105
Y+ PE ++ R G ++D+WS G ILY + G PF + I +I
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQIS 231
Query: 106 KGEIDFQIDP-----WPVISSS-AKELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + IDP +P I +++++ L +DPK+RI+ ++L HP+++
Sbjct: 232 K--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 32/172 (18%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDV-CGSA 57
+ + H G++H DLKP NFL + +LK IDFG++ ++ +D G+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 58 FYVAPEVLR-----RRYG-------KEADIWSAGVILYILLCGVPPFWADTDEGIFEEIR 105
Y+ PE ++ R G ++D+WS G ILY + G PF + I +I
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQIS 227
Query: 106 KGEIDFQIDP-----WPVISSS-AKELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + IDP +P I +++++ L +DPK+RI+ ++L HP+++
Sbjct: 228 K--LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-EEGKEFRDVCGSAFYVAPEVLR 66
HS+ VMHRD+KP N T+ V+K D GL F + + G+ +Y++PE +
Sbjct: 153 HSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGE-IDFQIDPWPVISSSAK 124
Y ++DIWS G +LY + PF+ D ++ +K E D+ P S +
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCKKIEQCDYPPLPSDHYSEELR 268
Query: 125 ELVRRMLTQDPKKR 138
+LV + DP+KR
Sbjct: 269 QLVNMCINPDPEKR 282
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKPEN L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
H+ ++HRDLKPEN L TS +K DFGL+ V + +Y APEV L+
Sbjct: 137 HANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ 193
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDE----GIFEEI-RKGEIDFQID------- 114
Y D+WS G I + P F +++ IF+ I E D+ D
Sbjct: 194 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 253
Query: 115 -----PWPVIS------SSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
P PV S S +L+ MLT +P KRI+A + L+H +L +
Sbjct: 254 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPEVLR 66
HS V+HR++K +N L + +K DFG I + R + G+ +++APEV+
Sbjct: 134 HSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 190
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRKGEIDFQIDPWPVISSSAK 124
R+ YG + DIWS G++ ++ G PP+ + ++ G + Q +P +S+ +
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ-NPEK-LSAIFR 248
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ + R L D +KR +A ++++H +LK
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
H+ ++HRDLKPEN L TS +K DFGL+ V + +Y APEV L+
Sbjct: 129 HANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQ 185
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDE----GIFEEI-RKGEIDFQID------- 114
Y D+WS G I + P F +++ IF+ I E D+ D
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 115 -----PWPVIS------SSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
P PV S S +L+ MLT +P KRI+A + L+H +L +
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKPEN L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKPEN L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKPEN L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 121 CHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKPEN L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
H+ ++HRDLKPEN L TS +K DFGL+ V + +Y APEV L+
Sbjct: 129 HANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQ 185
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDE----GIFEEI-RKGEIDFQID------- 114
Y D+WS G I + P F +++ IF+ I E D+ D
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 115 -----PWPVIS------SSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
P PV S S +L+ MLT +P KRI+A + L+H +L +
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E++ LK +DFGL+ ++ E + +Y APE++
Sbjct: 148 HSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 202
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 263 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
Query: 158 DKPI 161
D+P+
Sbjct: 322 DEPV 325
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E++ LK +DFGL+ ++ E + +Y APE++
Sbjct: 144 HSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 198
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 259 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
Query: 158 DKPI 161
D+P+
Sbjct: 318 DEPV 321
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL- 65
H ++HRDLKP N L DEN VLK DFGL+ F + + + +Y APE+L
Sbjct: 129 HQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 66 -RRRYGKEADIWSAGVILYILLCGVPPFWADTD 97
R YG D+W+ G IL LL VP D+D
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSD 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 165 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMXGYVATRWYRAPEIMLN 219
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 279
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 280 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 338
Query: 158 DKPI 161
D+P+
Sbjct: 339 DEPV 342
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 32/175 (18%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS+ V+HRDLKP+N L + N LK DFGL+ F + + + +Y P+VL
Sbjct: 117 CHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTD-----EGIFEEIRKGE---------- 108
+ Y D+WSAG I L P + D + IF +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 109 IDFQIDPW-----------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
D++ P P ++++ ++L++ +L +P +RI+A + L+HP+ +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 148 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 202
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 263 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
Query: 158 DKPI 161
D+P+
Sbjct: 322 DEPV 325
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
H+ ++HRDLKPEN L TS +K DFGL+ V + +Y APEV L+
Sbjct: 129 HANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQ 185
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDE----GIFEEI-RKGEIDFQID------- 114
Y D+WS G I + P F +++ IF+ I E D+ D
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 245
Query: 115 -----PWPVIS------SSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
P PV S S +L+ MLT +P KRI+A + L+H +L +
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 154 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 208
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 269 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
Query: 158 DKPI 161
D+P+
Sbjct: 328 DEPV 331
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 154 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 208
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 269 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
Query: 158 DKPI 161
D+P+
Sbjct: 328 DEPV 331
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD--VCGSAFYVAPEVL 65
H +HRD+KP+N L D N ++ DFG + + + + G+ Y++PE+L
Sbjct: 208 HQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
Query: 66 RR------RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV- 118
+ +YG E D WS GV +Y +L G PF+A++ + +I E FQ P V
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF-PSHVT 323
Query: 119 -ISSSAKELVRRMLTQDPKK 137
+S AK+L++R++ ++
Sbjct: 324 DVSEEAKDLIQRLICSRERR 343
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 154 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 208
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 269 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 327
Query: 158 DKPI 161
D+P+
Sbjct: 328 DEPV 331
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 147 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 201
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 262 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
Query: 158 DKPI 161
D+P+
Sbjct: 321 DEPV 324
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK--EFRDVCGSAFYVAPEV 64
H ++HRD+KP+N L D N LK DFG++ + E + V G+ Y +PE
Sbjct: 127 AHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 65 LRRRYGKEA-DIWSAGVILYILLCGVPPFWADTDEGI-FEEIRKGEIDFQIDPWPVISSS 122
+ E DI+S G++LY +L G PPF +T I + I+ + D I S
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS 243
Query: 123 AKELVRRMLTQDPKKRITAAQ 143
++ R +D R Q
Sbjct: 244 LSNVILRATEKDKANRYKTIQ 264
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 144 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 198
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 259 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
Query: 158 DKPI 161
D+P+
Sbjct: 318 DEPV 321
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 148 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 202
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 263 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
Query: 158 DKPI 161
D+P+
Sbjct: 322 DEPV 325
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD--VCGSAFYVAPEVL 65
H +HRD+KP+N L D N ++ DFG + + + + G+ Y++PE+L
Sbjct: 192 HQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 66 RR------RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV- 118
+ +YG E D WS GV +Y +L G PF+A++ + +I E FQ P V
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF-PSHVT 307
Query: 119 -ISSSAKELVRRMLTQDPKK 137
+S AK+L++R++ ++
Sbjct: 308 DVSEEAKDLIQRLICSRERR 327
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGXVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 153 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 207
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 267
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 268 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 326
Query: 158 DKPI 161
D+P+
Sbjct: 327 DEPV 330
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 147 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 201
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 262 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
Query: 158 DKPI 161
D+P+
Sbjct: 321 DEPV 324
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 144 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 198
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 259 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
Query: 158 DKPI 161
D+P+
Sbjct: 318 DEPV 321
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 141 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 195
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 255
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 256 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 314
Query: 158 DKPI 161
D+P+
Sbjct: 315 DEPV 318
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 148 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 202
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 263 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
Query: 158 DKPI 161
D+P+
Sbjct: 322 DEPV 325
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 149 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 203
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 264 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 158 DKPI 161
D+P+
Sbjct: 323 DEPV 326
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 35/173 (20%)
Query: 8 HSKGVMHRDLKPENFLFTSKD----------ENAVLKAIDFGLSVFIEEGK-----EFRD 52
HS ++HRDLKP+N L ++ EN + DFGL ++ G+ +
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 53 VCGSAFYVAPEVL----RRRYGKEADIWSAGVILYILLC-GVPPFW--ADTDEGIFEEIR 105
G++ + APE+L +RR + DI+S G + Y +L G PF + I I
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI- 268
Query: 106 KGEIDFQIDPWPVIS-----SSAKELVRRMLTQDPKKRITAAQVLEHP--WLK 151
F +D + + A +L+ +M+ DP KR TA +VL HP W K
Sbjct: 269 -----FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 316
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 165 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 219
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 279
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 280 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 338
Query: 158 DKPI 161
D+P+
Sbjct: 339 DEPV 342
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 35/173 (20%)
Query: 8 HSKGVMHRDLKPENFLFTSKD----------ENAVLKAIDFGLSVFIEEGK-----EFRD 52
HS ++HRDLKP+N L ++ EN + DFGL ++ G+ +
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 53 VCGSAFYVAPEVL----RRRYGKEADIWSAGVILYILLC-GVPPFW--ADTDEGIFEEIR 105
G++ + APE+L +RR + DI+S G + Y +L G PF + I I
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI- 268
Query: 106 KGEIDFQIDPWPVIS-----SSAKELVRRMLTQDPKKRITAAQVLEHP--WLK 151
F +D + + A +L+ +M+ DP KR TA +VL HP W K
Sbjct: 269 -----FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 316
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 138 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 192
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 253 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
Query: 158 DKPI 161
D+P+
Sbjct: 312 DEPV 315
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 126 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 243 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 162 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 216
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 277 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
Query: 158 DKPI 161
D+P+
Sbjct: 336 DEPV 339
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS GV+HRDLKP N + +E+ LK +DFGL+ + E + +Y APEV+
Sbjct: 143 HSAGVVHRDLKPGNL---AVNEDCELKILDFGLARHAD--AEMTGYVVTRWYRAPEVILS 197
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDF---------- 111
Y + DIWS G I+ +L G F + D I + +F
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257
Query: 112 ---QIDP----------WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
Q P +P S A +L+ +ML D KR+TAAQ L HP+ +
Sbjct: 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 141 IHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIML 195
Query: 67 R--RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIR 105
Y + DIWS G I+ LL G F A+ + I E
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 106 KGEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEA 156
+ I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 256 RNYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 157 SDKPI 161
D+P+
Sbjct: 315 DDEPV 319
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS GV+HRDLKP N + +E+ LK +DFGL+ + E + +Y APEV+
Sbjct: 161 HSAGVVHRDLKPGNL---AVNEDCELKILDFGLARHAD--AEMTGYVVTRWYRAPEVILS 215
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDF---------- 111
Y + DIWS G I+ +L G F + D I + +F
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275
Query: 112 ---QIDP----------WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
Q P +P S A +L+ +ML D KR+TAAQ L HP+ +
Sbjct: 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 139 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 193
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 253
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 254 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 312
Query: 158 DKPI 161
D+P+
Sbjct: 313 DEPV 316
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 144 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 198
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 259 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
Query: 158 DKPI 161
D+P+
Sbjct: 318 DEPV 321
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPE 63
N HSK ++HRDLK N L T + + ++ DFG+S + + RD G+ +++APE
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 64 VLR------RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP-- 115
V+ Y +ADIWS G+ L + PP + +I K + + P
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK 247
Query: 116 WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
W S ++ ++ L ++P+ R +AAQ+LEHP++
Sbjct: 248 W---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 161 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 215
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 275
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 276 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 334
Query: 158 DKPI 161
D+P+
Sbjct: 335 DEPV 338
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 139 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 193
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 253
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 254 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 312
Query: 158 DKPI 161
D+P+
Sbjct: 313 DEPV 316
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 176
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 153 HSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 207
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 267
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 268 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 326
Query: 158 DKPI 161
D+P+
Sbjct: 327 DEPV 330
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E++ LK +DFGL ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDSELKILDFGLCRHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 31/176 (17%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPE 63
+ CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 64 VLR--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP---- 115
+L + Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 116 ----------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 140 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 194
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 254
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 255 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 313
Query: 158 DKPI 161
D+P+
Sbjct: 314 DEPV 317
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 147 HSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 201
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 262 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
Query: 158 DKPI 161
D+P+
Sbjct: 321 DEPV 324
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 147 HSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 201
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 262 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
Query: 158 DKPI 161
D+P+
Sbjct: 321 DEPV 324
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 152 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 206
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 266
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 267 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 325
Query: 158 DKPI 161
D+P+
Sbjct: 326 DEPV 329
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPE 63
N HSK ++HRDLK N L T + + ++ DFG+S + + RD G+ +++APE
Sbjct: 123 NFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 179
Query: 64 VLR------RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP-- 115
V+ Y +ADIWS G+ L + PP + +I K + + P
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK 239
Query: 116 WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
W S ++ ++ L ++P+ R +AAQ+LEHP++
Sbjct: 240 W---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ E + +Y APE++
Sbjct: 149 HSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLN 203
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 264 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 158 DKPI 161
D+P+
Sbjct: 323 DEPV 326
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 123 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 179
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 239
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 240 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 162 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 216
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 277 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
Query: 158 DKPI 161
D+P+
Sbjct: 336 DEPV 339
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 161 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 215
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 275
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 276 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 334
Query: 158 DKPI 161
D+P+
Sbjct: 335 DEPV 338
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 162 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMXGXVATRWYRAPEIMLN 216
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 277 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
Query: 158 DKPI 161
D+P+
Sbjct: 336 DEPV 339
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ E + +Y APE++
Sbjct: 149 HSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLN 203
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 264 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 158 DKPI 161
D+P+
Sbjct: 323 DEPV 326
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 138 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 192
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 253 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
Query: 158 DKPI 161
D+P+
Sbjct: 312 DEPV 315
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 141 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILG 197
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ L+ G F D + E++ +F P +
Sbjct: 198 MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 257
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML DP KRI+ + L HP
Sbjct: 258 VENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHP 317
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 318 YITVWYDPAEAEAPP 332
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ E + +Y APE++
Sbjct: 149 HSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLN 203
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 264 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
Query: 158 DKPI 161
D+P+
Sbjct: 323 DEPV 326
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 123 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 179
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 239
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 240 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 138 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 192
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 253 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
Query: 158 DKPI 161
D+P+
Sbjct: 312 DEPV 315
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
HS G++HRDLKP N + +E++ L+ +DFGL+ +E E + +Y APE++
Sbjct: 147 IHSAGIIHRDLKPSN---VAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEIML 201
Query: 67 R--RYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDF--------- 111
Y + DIWS G I+ LL G F + D + I E + +
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHA 261
Query: 112 -----QIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
+ P P S A +L+ RML D +R++AA+ L H + + +
Sbjct: 262 RTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 321
Query: 158 DKP 160
D+P
Sbjct: 322 DEP 324
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 78/195 (40%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y DIWS G I+ L+ G F D + E++ +F P +
Sbjct: 200 MGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML DP KRI+ + L HP
Sbjct: 260 VENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YITVWYDPAEAEAPP 334
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS V+HRDLKP+N L ++ +K DFGL+ F + + + +Y APE+L
Sbjct: 126 CHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 66 R--RRYGKEADIWSAGVILYILLCGVPPFWADTD-EGIFEEIRK-GEIDFQIDP------ 115
+ Y DIWS G I ++ F D++ + +F R G D + P
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 116 --------W---------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
W P + + L+ +ML DP KRI+A L HP+ ++
Sbjct: 243 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DFGL+ ++ E + +Y APE++
Sbjct: 138 HSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLN 192
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 253 NYIQ-SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
Query: 158 DKPI 161
D+P+
Sbjct: 312 DEPV 315
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 34/182 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H+ G++HRDLKP N + +E+ LK +DFGL+ + E + +Y APEV+
Sbjct: 145 HAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILN 199
Query: 68 --RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEI--------------------- 104
RY + DIWS G I+ ++ G F +EI
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259
Query: 105 --RKGEIDFQIDPWPVISSSAK----ELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
KG + + + I ++A L+ +ML D ++R+TA + L HP+ + + D
Sbjct: 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 319
Query: 159 KP 160
+P
Sbjct: 320 EP 321
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 34/182 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS G++HRDLKP N + +E++ L+ +DFGL+ +E E + +Y APE++
Sbjct: 148 HSAGIIHRDLKPSN---VAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEIMLN 202
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDF---------- 111
Y + DIWS G I+ LL G F + D + I E + +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 262
Query: 112 ----QIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
+ P P S A +L+ RML D +R++AA+ L H + + + D
Sbjct: 263 TYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPED 322
Query: 159 KP 160
+P
Sbjct: 323 EP 324
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 31/167 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF------RDVCGSAFYVA 61
H G +HRD+K N L E+ ++ DFG+S F+ G + + G+ ++A
Sbjct: 138 HKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 62 PEVLR--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI 119
PEV+ R Y +ADIWS G+ L G P+ + ++ + Q DP P +
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK------YPPMKVLMLTLQNDP-PSL 247
Query: 120 SS-------------SAKELVRRMLTQDPKKRITAAQVLEHPWLKES 153
+ S ++++ L +DP+KR TAA++L H + +++
Sbjct: 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +D+GL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDYGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 25/170 (14%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-----VFIEEGKEFRDVCGSAFY 59
N H ++HRDLK N LFT + +K DFG+S I+ F G+ ++
Sbjct: 122 NYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRTXIQRRDSF---IGTPYW 175
Query: 60 VAPEVLR------RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI 113
+APEV+ R Y +AD+WS G+ L + PP + +I K E
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 235
Query: 114 DP--WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPI 161
P W SS+ K+ +++ L ++ R T +Q+L+HP++ S+KPI
Sbjct: 236 QPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 279
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 34/182 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS G++HRDLKP N + +E+ L+ +DFGL+ +E E + +Y APE++
Sbjct: 140 HSAGIIHRDLKPSN---VAVNEDCELRILDFGLARQADE--EMTGYVATRWYRAPEIMLN 194
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDF---------- 111
Y + DIWS G I+ LL G F + D + I E + +
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 254
Query: 112 ----QIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
+ P P S A +L+ RML D +R++AA+ L H + + + D
Sbjct: 255 TYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPED 314
Query: 159 KP 160
+P
Sbjct: 315 EP 316
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 31/167 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF------RDVCGSAFYVA 61
H G +HRD+K N L E+ ++ DFG+S F+ G + + G+ ++A
Sbjct: 133 HKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 62 PEVLR--RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI 119
PEV+ R Y +ADIWS G+ L G P+ + ++ + Q DP P +
Sbjct: 190 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK------YPPMKVLMLTLQNDP-PSL 242
Query: 120 SS-------------SAKELVRRMLTQDPKKRITAAQVLEHPWLKES 153
+ S ++++ L +DP+KR TAA++L H + +++
Sbjct: 243 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 39/177 (22%)
Query: 8 HSKGVMHRDLKPENFLFTSKD----------ENAVLKAIDFGLSVFIEEGKE-FR----D 52
HS ++HRDLKP+N L ++ EN + DFGL ++ G+ FR +
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 53 VCGSAFYVAPEVL--------RRRYGKEADIWSAGVILYILLC-GVPPFW--ADTDEGIF 101
G++ + APE+L +RR + DI+S G + Y +L G PF + I
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 102 EEIRKGEIDFQIDPWPVIS-----SSAKELVRRMLTQDPKKRITAAQVLEHP--WLK 151
I F +D + + A +L+ +M+ DP KR TA +VL HP W K
Sbjct: 252 RGI------FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-CGSAFYVAPEVL- 65
H ++HRD+K +N L + + VLK DFG S + + G+ Y+APE++
Sbjct: 139 HDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIID 196
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R YGK ADIWS G + + G PPF+ + E + G + +S+ A
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPFY-ELGEPQAAMFKVGMFKVHPEIPESMSAEA 255
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKES 153
K + + DP KR A +L +LK S
Sbjct: 256 KAFILKCFEPDPDKRACANDLLVDEFLKVS 285
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 45/196 (22%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS G++HRDLKP N + S +A LK +DFGL+ + +Y APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI-- 119
Y + DIWS GVI+ ++ G F D + E++ +F P +
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 120 --------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEH 147
+S A++L+ +ML D KRI+ + L+H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 148 PWLK---ESGEASDKP 160
P++ + EA P
Sbjct: 319 PYINVWYDPSEAEAPP 334
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 45/196 (22%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS G++HRDLKP N + S +A LK +DFGL+ + +Y APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI-- 119
Y + DIWS GVI+ ++ G F D + E++ +F P +
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 120 --------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEH 147
+S A++L+ +ML D KRI+ + L+H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 148 PWLK---ESGEASDKP 160
P++ + EA P
Sbjct: 319 PYINVWYDPSEAEAPP 334
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 8 HSKGVMHRDLKPENFLFTSKD----------ENAVLKAIDFGLSVFIEEGK-----EFRD 52
HS ++HRDLKP+N L ++ EN + DFGL ++ G+ +
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 53 VCGSAFYVAPEVL--------RRRYGKEADIWSAGVILYILLC-GVPPFW--ADTDEGIF 101
G++ + APE+L +RR + DI+S G + Y +L G PF + I
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 102 EEIRKGEIDFQIDPWPVIS-----SSAKELVRRMLTQDPKKRITAAQVLEHP--WLK 151
I F +D + + A +L+ +M+ DP KR TA +VL HP W K
Sbjct: 252 RGI------FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVC-GSAFYVAPEVLR 66
H + ++HRD+K +N +F +KD L DFG++ + E C G+ +Y++PE+
Sbjct: 142 HDRKILHRDIKSQN-IFLTKDGTVQLG--DFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPV---ISSS 122
+ Y ++DIW+ G +LY L F A + + + +I G PV S
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP------PVSLHYSYD 252
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFRMKQF 172
+ LV ++ ++P+ R + +LE ++ + E P A F +K F
Sbjct: 253 LRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTF 302
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 32/175 (18%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL 65
CHS+ V+HRDLKP+N L + N LK +FGL+ F + + + +Y P+VL
Sbjct: 117 CHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTD-----EGIFEEIRKGE---------- 108
+ Y D+WSAG I L P + D + IF +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 109 IDFQIDPW-----------PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
D++ P P ++++ ++L++ +L +P +RI+A + L+HP+ +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE---------------EGKEFR 51
HS+G++HRDLKP N DE+ +K DFGL+ +
Sbjct: 132 IHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 52 DVCGSAFYVAPEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE-GIFEEIRKGE 108
G+A YVA EVL Y ++ D++S G+I + ++ PF + I +++R
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 109 IDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
I+F D K+++R ++ DP KR A +L WL
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + H ++H DLKPEN L + + + K IDFG S + E + S FY
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFGSSCY--EHQRVYTXIQSRFYR 266
Query: 61 APEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTDEG 99
APEV L RYG D+WS G IL LL G P DEG
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELLTGY-PLLPGEDEG 305
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +++ L DP R+T Q L HPWL+
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE---------------EGKEFR 51
HS+G++HRDLKP N DE+ +K DFGL+ +
Sbjct: 132 IHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 52 DVCGSAFYVAPEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE-GIFEEIRKGE 108
G+A YVA EVL Y ++ D++S G+I + ++ PF + I +++R
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 109 IDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
I+F D K+++R ++ DP KR A +L WL
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + H ++H DLKPEN L + + + K IDFG S + E + S FY
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFGSSCY--EHQRVYXXIQSRFYR 266
Query: 61 APEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTDEG 99
APEV L RYG D+WS G IL LL G P DEG
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELLTGY-PLLPGEDEG 305
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +++ L DP R+T Q L HPWL+
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 1 MTVANVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV 60
+ + H ++H DLKPEN L + + + K IDFG S + E + S FY
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGI-KVIDFGSSCY--EHQRVYTXIQSRFYR 266
Query: 61 APEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTDEG 99
APEV L RYG D+WS G IL LL G P DEG
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELLTGY-PLLPGEDEG 305
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 125 ELVRRMLTQDPKKRITAAQVLEHPWLK 151
+ +++ L DP R+T Q L HPWL+
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK + FGL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILGFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-CGSAFYVAPEVL- 65
H ++HRD+K +N L + + VLK DFG S + + G+ Y+APE++
Sbjct: 125 HDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIID 182
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R YGK ADIWS G + + G PPF+ + E + G + +S+ A
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPFY-ELGEPQAAMFKVGMFKVHPEIPESMSAEA 241
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLK 151
K + + DP KR A +L +LK
Sbjct: 242 KAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 195 IQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEF 254
IQ L + F ++D D S +L DE + GLAKLG L + + + + D +G+GT+D EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 255 ITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAF--------KEYNMGDDATIK 306
+ A R + AF D+ D +TVD+L + + +D ++
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLR 155
Query: 307 EIMSEVD-RDKDGRISYDEF 325
+ D +KDG+++ EF
Sbjct: 156 RFLDNFDSSEKDGQVTLAEF 175
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +D GL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDAGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +DF L+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDFYLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
+L EEI++L++ F E D DK G ++ +L + +G E+++ + Q +++ G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 249 IDYIEFITATMQRHKLER-----FEHLDKAFQYFDKDNDRYITVDELETAFKE---YNMG 300
+D+ +F+ + E + L AF+ FD + D I+ EL A ++ + +G
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 137
Query: 301 DDATIKEIMSEVDRDKDGRISYDEFCAMMKR 331
I+EI+ +VD + DGR+ ++EF MM R
Sbjct: 138 -HRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS+G++H D+KP N + K DFGL V + G Y+APE+L+
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG 230
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
YG AD++S G+ + + C + EG ++++R+G + + +SS + ++
Sbjct: 231 SYGTAADVFSLGLTILEVACNME--LPHGGEG-WQQLRQGYLPPEFTAG--LSSELRSVL 285
Query: 128 RRMLTQDPKKRITAAQVLEHPWLKE 152
ML DPK R TA +L P L++
Sbjct: 286 VMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 45/196 (22%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-L 65
HS G++HRDLKP N + S +A LK +DFGL+ + +Y APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI-- 119
Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 120 --------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEH 147
+S A++L+ +ML D KRI+ + L+H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 148 PWLK---ESGEASDKP 160
P++ + EA P
Sbjct: 319 PYINVWYDPSEAEAPP 334
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +D GL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDRGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S +A LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YINVWYDPSEAEAPP 334
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 36/184 (19%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS ++HRDLKP N + +E+ LK +D GL+ ++ E + +Y APE++
Sbjct: 142 HSADIIHRDLKPSNL---AVNEDCELKILDGGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 68 --RYGKEADIWSAGVILYILLCGVPPF-------------------WADTDEGIFEEIRK 106
Y + DIWS G I+ LL G F A+ + I E +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 107 GEIDFQIDPWPVISSS---------AKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
I + P ++ + A +L+ +ML D KRITAAQ L H + + +
Sbjct: 257 NYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
Query: 158 DKPI 161
D+P+
Sbjct: 316 DEPV 319
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 82/195 (42%), Gaps = 40/195 (20%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-----EEGKEFRDVCGSAFYVAP 62
HS V+HRDLKP N L +EN LK DFG++ + E + + +Y AP
Sbjct: 175 HSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 63 EVL--RRRYGKEADIWSAGVI---------------------LYILLCGVPPFWADTDEG 99
E++ Y + D+WS G I L +++ G P G
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 291
Query: 100 IFEEIR---KGEIDFQIDPW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
E +R + Q PW P A L+ RML +P RI+AA L HP+L +
Sbjct: 292 A-ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
Query: 153 SGEASDKPIDTAVLF 167
+ D+P D A F
Sbjct: 351 YHDPDDEP-DCAPPF 364
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S +A LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YINVWYDPSEAEAPP 334
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
+L EEI++L++ F E D DK G ++ +L + +G E+++ + Q +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 249 IDYIEFITATMQRHKLER-----FEHLDKAFQYFDKDNDRYITVDELETAFKE---YNMG 300
+D+ +F+ + E + L AF+ FD + D I+ EL A ++ + +G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 123
Query: 301 DDATIKEIMSEVDRDKDGRISYDEFCAMMKR 331
I+EI+ +VD + DGR+ ++EF MM R
Sbjct: 124 -HRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 24/156 (15%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPEVLRR-RYG 70
+HRD+K N L ++ K DFG++ + + R+ V G+ F++APEV++ Y
Sbjct: 147 IHRDIKAGNILLNTEGHA---KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 71 KEADIWSAGVILYILLCGVPPFWADTD--EGIF-------EEIRKGEIDFQIDPWPVISS 121
ADIWS G+ + G PP+ AD IF RK E+ W S
Sbjct: 204 CVADIWSLGITAIEMAEGKPPY-ADIHPMRAIFMIPTNPPPTFRKPEL------W---SD 253
Query: 122 SAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEAS 157
+ + V++ L + P++R TA Q+L+HP+++ + S
Sbjct: 254 NFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL----- 65
GV+HRD+KP N L DE +K DFG+S + + K G A Y+APE +
Sbjct: 145 GVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 66 -RRRYGKEADIWSAGVILYILLCGVPPFW-ADTDEGIFEEIRKGEIDFQIDPWPVI---- 119
+ Y AD+WS G+ L L G P+ TD + ++ Q +P P++
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV------LQEEP-PLLPGHM 254
Query: 120 --SSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
S + V+ LT+D +KR ++LEH ++K
Sbjct: 255 GFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 209 KSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQRHKLER-- 266
+ G++S EL + LG ++++ + D DG+GT+D+ EF+ ++ K +
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 267 --FEHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRIS 321
E L F+ FDK+ D YI ++EL+ + E DD I+E+M + D++ DGRI
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD--IEELMKDGDKNNDGRID 149
Query: 322 YDEFCAMMK 330
YDEF MK
Sbjct: 150 YDEFLEFMK 158
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + +ELK L G T+ E D+++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKRGTQ--RRGFASRSLAHVVTMRHK 352
++E++ EVD D G + +DEF MM R + +G L+ + M K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDK 106
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 209 KSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQR----HKL 264
+ G++S EL + LG ++++ + D DG+GT+D+ EF+ ++ K
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRIS 321
+ E L F+ FDK+ D YI ++EL+ + E DD I+E+M + D++ DGRI
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD--IEELMKDGDKNNDGRID 149
Query: 322 YDEFCAMMK 330
YDEF MK
Sbjct: 150 YDEFLEFMK 158
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + +ELK L G T+ E D+++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKRGTQ--RRGFASRSLAHVVTMRHK 352
++E++ EVD D G + +DEF MM R + +G + L+ + M K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDK 106
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 137 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 67 RRYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + D+WS G I+ ++C F + D + E++ +F P +
Sbjct: 194 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 253
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 254 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 313
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 314 YINVWYDPSEAEAPP 328
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 148 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 204
Query: 67 RRYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + D+WS G I+ ++C F + D + E++ +F P +
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 264
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 265 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 324
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 325 YINVWYDPSEAEAPP 339
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 209 KSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQR----HKL 264
+ G++S EL + LG ++++ + D DG+GT+D+ EF+ ++ K
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRIS 321
+ E L F+ +DK+ D YI +DEL+ + E DD I+E+M + D++ DGRI
Sbjct: 92 KSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDD--IEELMKDGDKNNDGRID 149
Query: 322 YDEFCAMMK 330
YDEF MK
Sbjct: 150 YDEFLEFMK 158
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + DELK L G T+ E D+++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKRGTQ--RRGFASRSLAHVVTMRHK 352
++E++ EVD D G + +DEF MM R + +G + L+ + M K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDK 106
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 209 KSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQR----HKL 264
+ G++S EL + LG ++++ + D DG+GT+D+ EF+ ++ K
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRIS 321
+ E L F+ FDK+ D YI +DEL+ + E DD I+E+M + D++ DGRI
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDD--IEELMKDGDKNNDGRID 149
Query: 322 YDEFCAMMK 330
YDE+ MK
Sbjct: 150 YDEWLEFMK 158
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + DELK L G T+ E D+++ M+ D + +G IDY E++
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWL 154
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKRGTQ--RRGFASRSLAHVVTMRHK 352
++E++ EVD D G + +DEF MM R + +G + L+ + M K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDK 106
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
+L EEI++L++ F E D DK G ++ +L + +G E+++ + Q +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 249 IDYIEFITATMQRHKLER-----FEHLDKAFQYFDKDNDRYITVDELETAFKE---YNMG 300
+D+ +F+ + E + L AF+ FD + D I+ EL A + + +G
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVG 123
Query: 301 DDATIKEIMSEVDRDKDGRISYDEFCAMMKR 331
I+EI+ +VD + DGR+ ++EF MM R
Sbjct: 124 -HRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 82/195 (42%), Gaps = 40/195 (20%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI-----EEGKEFRDVCGSAFYVAP 62
HS V+HRDLKP N L +EN LK DFG++ + E + + +Y AP
Sbjct: 176 HSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 63 EVL--RRRYGKEADIWSAGVI---------------------LYILLCGVPPFWADTDEG 99
E++ Y + D+WS G I L +++ G P G
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 292
Query: 100 IFEEIR---KGEIDFQIDPW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
E +R + Q PW P A L+ RML +P RI+AA L HP+L +
Sbjct: 293 A-ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
Query: 153 SGEASDKPIDTAVLF 167
+ D+P D A F
Sbjct: 352 YHDPDDEP-DCAPPF 365
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + D+WS G I+ ++C F + D + E++ +F P +
Sbjct: 200 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YINVWYDPSEAEAPP 334
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 181 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355
Query: 147 HPWL 150
HP++
Sbjct: 356 HPYI 359
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPF----WADTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ ++C F + D + E++ F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YINVWYDPSEAEAPP 334
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 22/152 (14%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-CGSAFYVAPEVLR 66
HS+ +HRD+K N L + E+ +K DFG++ + + + R+ G+ F++APEV++
Sbjct: 141 HSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 197
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI---DPWPVI--- 119
+ Y +ADIWS G+ L G PP E+ ++ F I +P P +
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNP-PTLEGN 247
Query: 120 -SSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
S KE V L ++P R TA ++L+H ++
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
NL E+I + K+ F D D +G++S EL + LG + E +V M D+DGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 249 IDYIEFITATMQRHKLERFEH-LDKAFQYFDKDNDRYITVDEL 290
I++ EF+ ++ K E L +AF+ FDK+ D I+ EL
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAEL 105
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKDN+ I+ EL T + + +A + ++M+E+D D + +I +
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 324 EFCAMMKR 331
EF A+M R
Sbjct: 67 EFLALMSR 74
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
H ++HRDLKPEN + + + K ID G + +++G+ + G+ Y+APE+L +
Sbjct: 139 HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ 198
Query: 67 RRYGKEADIWSAGVILYILLCGVPPF 92
++Y D WS G + + + G PF
Sbjct: 199 KKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-CGSAFYVAPEVLR 66
HS+ +HRD+K N L + E+ +K DFG++ + + + R+ G+ F++APEV++
Sbjct: 121 HSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 177
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI---DPWPVI--- 119
+ Y +ADIWS G+ L G PP E+ ++ F I +P P +
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNP-PTLEGN 227
Query: 120 -SSSAKELVRRMLTQDPKKRITAAQVLEH 147
S KE V L ++P R TA ++L+H
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-R 66
H ++HRDLKPEN + + + K ID G + +++G+ + G+ Y+APE+L +
Sbjct: 138 HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ 197
Query: 67 RRYGKEADIWSAGVILYILLCGVPPF 92
++Y D WS G + + + G PF
Sbjct: 198 KKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 181 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355
Query: 147 HPWL 150
HP++
Sbjct: 356 HPYI 359
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 144 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 259 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 318
Query: 147 HPWL 150
HP++
Sbjct: 319 HPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 147 HPWL 150
HP++
Sbjct: 318 HPYI 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 147 HPWL 150
HP++
Sbjct: 318 HPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 144 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 259 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 318
Query: 147 HPWL 150
HP++
Sbjct: 319 HPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 142 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 198
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 256
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 257 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 316
Query: 147 HPWL 150
HP++
Sbjct: 317 HPYI 320
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 34/186 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE----EGKEFRDVCGSAFYVAPE 63
HS V+HRDLKP N ++D VLK DFGL+ ++ + + +Y +P
Sbjct: 137 HSANVLHRDLKPANLFINTED--LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194
Query: 64 VL--RRRYGKEADIWSAGVILYILLCGVPPFWA-----------DTDEGIFEEIRKGEID 110
+L Y K D+W+AG I +L G F ++ + EE R+ +
Sbjct: 195 LLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLS 254
Query: 111 F--------QIDP-------WPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
+P P IS A + + ++LT P R+TA + L HP++
Sbjct: 255 VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF 314
Query: 156 ASDKPI 161
D+PI
Sbjct: 315 PMDEPI 320
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y++PE L+ Y
Sbjct: 145 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYS 200
Query: 71 KEADIWSAGVILYILLCGVPPFWADTDE-GIFEEIRKGEIDFQID------PWPVISSSA 123
++DIWS G+ L + G P + + IFE +D+ ++ P V S
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE-----LLDYIVNEPPPKLPSGVFSLEF 255
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKES 153
++ V + L ++P +R Q++ H ++K S
Sbjct: 256 QDFVNKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-CGSAFYVAPEVLR 66
HS+ +HRD+K N L + E+ +K DFG++ + + + R+ G+ F++APEV++
Sbjct: 136 HSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK 192
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI---DPWPVI--- 119
+ Y +ADIWS G+ L G PP E+ ++ F I +P P +
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNP-PTLEGN 242
Query: 120 -SSSAKELVRRMLTQDPKKRITAAQVLEH 147
S KE V L ++P R TA ++L+H
Sbjct: 243 YSKPLKEFVEACLNKEPSFRPTAKELLKH 271
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-CGSAFYVAPEVLR 66
H V+HRD+K +N L T ENA +K +DFG+S ++ R+ G+ +++APEV+
Sbjct: 146 HQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 67 ------RRYGKEADIWSAGVILYILLCGVPPFW-ADTDEGIFEEIRKGEIDFQIDPWPVI 119
Y ++D+WS G+ + G PP +F R + W
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW--- 259
Query: 120 SSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAVLFRMK 170
S + + L ++ +R Q+++HP+++ D+P + V ++K
Sbjct: 260 SKKFQSFIESCLVKNHSQRPATEQLMKHPFIR------DQPNERQVRIQLK 304
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 137 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 252 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 311
Query: 147 HPWL 150
HP++
Sbjct: 312 HPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 136 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 250
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310
Query: 147 HPWL 150
HP++
Sbjct: 311 HPYI 314
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 209 KSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQ----RHKL 264
+ G +S EL + LG ++++ + D DG+GT+D+ EF+ ++ K
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKG 91
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRIS 321
+ E L F+ FDK+ D YI ++EL+ + E DD I+E+M + D++ DGRI
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD--IEELMKDGDKNNDGRID 149
Query: 322 YDEFCAMMK 330
YDEF MK
Sbjct: 150 YDEFLEFMK 158
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + +ELK L G T+ E D+++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKRGTQ--RRGFASRSLAHVVTMRHK 352
++E++ EVD D G + +DEF MM R + +G L+ + M K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDK 106
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 137 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 252 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 311
Query: 147 HPWL 150
HP++
Sbjct: 312 HPYI 315
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 147 HPWL 150
HP++
Sbjct: 318 HPYI 321
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPEVLR 66
HS+ +HRD+K N L + E+ +K DFG++ + + + R+ G+ F++APEV++
Sbjct: 121 HSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK 177
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI---DPWPVI--- 119
+ Y +ADIWS G+ L G PP E+ ++ F I +P P +
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPP---------HSELHPMKVLFLIPKNNP-PTLEGN 227
Query: 120 -SSSAKELVRRMLTQDPKKRITAAQVLEH 147
S KE V L ++P R TA ++L+H
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 147 HPWL 150
HP++
Sbjct: 318 HPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 147 HPWL 150
HP++
Sbjct: 318 HPYI 321
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 209 KSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQR----HKL 264
+ G++S EL + LG ++++ + D DG+GT+D+ EF+ ++ K
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRIS 321
+ E L F+ DK+ D YI +DEL+ + E DD I+E+M + D++ DGRI
Sbjct: 92 KSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDD--IEELMKDGDKNNDGRID 149
Query: 322 YDEFCAMMK 330
YDEF MK
Sbjct: 150 YDEFLEFMK 158
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + DELK L G T+ E D+++ M+ D + +G IDY EF+
Sbjct: 95 EELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKRGTQ--RRGFASRSLAHVVTMRHK 352
++E++ EVD D G + +DEF MM R + +G + L+ + M K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDK 106
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 209 KSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQR----HKL 264
+ G++S EL + LG ++++ + D DG+GT+D+ EF+ ++ K
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRIS 321
+ E L F+ FDK+ D YI +DEL+ + E DD I+E+M + D++ DGRI
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDD--IEELMKDGDKNNDGRID 149
Query: 322 YDEFCAMMK 330
YDE MK
Sbjct: 150 YDEXLEFMK 158
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + DELK L G T+ E D+++ M+ D + +G IDY E +
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXL 154
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 305 IKEIMSEVDRDKDGRISYDEFCAMMKRGTQ--RRGFASRSLAHVVTMRHK 352
++E++ EVD D G + +DEF MM R + +G + L+ + M K
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDK 106
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 147 HPWL 150
HP++
Sbjct: 318 HPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YINVWYDPSEAEAPP 334
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL- 65
HS G+ HRD+KP+N L SKD LK DFG + I +C S FY APE++
Sbjct: 158 HSLGICHRDIKPQNLLVNSKDN--TLKLCDFGSAKKLIPSEPSVAXIC-SRFYRAPELML 214
Query: 66 -RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEI--------DFQIDP- 115
Y D+WS G + L+ G P F +T I + +R +I +++P
Sbjct: 215 GATEYTPSIDLWSIGCVFGELILGKPLFSGETS--IDQLVRIIQIMGTPTKEQMIRMNPH 272
Query: 116 -----WPVI-------------SSSAKELVRRMLTQDPKKRITAAQVLEHPW---LKESG 154
+P + S A +L+ ++L +P RI + + HP+ L+ S
Sbjct: 273 YTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSY 332
Query: 155 EASDK 159
E+ K
Sbjct: 333 ESEVK 337
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YINVWYDPSEAEAPP 334
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 7 CHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIE---------------EGKEFR 51
HS+G++HR+LKP N DE+ +K DFGL+ +
Sbjct: 132 IHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 52 DVCGSAFYVAPEVL--RRRYGKEADIWSAGVILYILLCGVPPFWADTDE-GIFEEIRKGE 108
G+A YVA EVL Y ++ D +S G+I + + PF + I +++R
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKKLRSVS 245
Query: 109 IDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
I+F D K+++R ++ DP KR A +L WL
Sbjct: 246 IEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 136 HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 67 RRYGKEADIWSAGVIL------YILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI- 119
Y + DIWS G I+ IL G + D + E++ +F P +
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQPTVR 250
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML DP KRI+ L+
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310
Query: 147 HPWL 150
HP++
Sbjct: 311 HPYI 314
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 17/93 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-------------C 54
HSKG+MHRDLKP N FT D V+K DFGL +++ +E + V
Sbjct: 181 HSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV 237
Query: 55 GSAFYVAPEVLR-RRYGKEADIWSAGVILYILL 86
G+ Y++PE + Y + DI+S G+IL+ LL
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-CGSAFYVAPEVLR 66
HS+ +HRD+K N L + E +K DFG++ + + + R+ G+ F++APEV++
Sbjct: 137 HSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQ 193
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVI---SSS 122
+ Y +ADIWS G+ L G PP ++D +R + + +P ++ + S
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGEPP---NSD---MHPMRVLFLIPKNNPPTLVGDFTKS 247
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWL 150
KE + L +DP R TA ++L+H ++
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 14/139 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 125 HAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 181
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPFW-ADTDEGIFEEIRKGEIDFQIDPWPVI 119
+R + Y ++D+++ G++LY L+ G P+ + + I E + +G + + +
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK---V 238
Query: 120 SSSAKELVRRMLTQDPKKR 138
S+ + ++R++ + KK+
Sbjct: 239 RSNCPKRMKRLMAECLKKK 257
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL--R 66
S V HRD+KP N L D LK DFG + + + S +Y APE++
Sbjct: 149 SVNVCHRDIKPHNVLVNEAD--GTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGN 206
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRK-----------------GEI 109
+ Y DIWS G I ++ G P F D G EI + ++
Sbjct: 207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDV 266
Query: 110 DFQID---PWPVISS--------SAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASD 158
D PW + S A +L+ +L P++R+ + L HP+ E + +
Sbjct: 267 DLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPAT 326
Query: 159 K 159
K
Sbjct: 327 K 327
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 23/151 (15%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLS--VFIEEGKEFRDVCGSAFYVAPEVLR-RR 68
+MHRD+KP N L S+ E +K DFG+S + E EF G+ Y++PE L+
Sbjct: 129 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDEMANEF---VGTRSYMSPERLQGTH 182
Query: 69 YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQID------PWPVISSS 122
Y ++DIWS G+ L + G P IFE +D+ ++ P V S
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFE-----LLDYIVNEPPPKLPSAVFSLE 234
Query: 123 AKELVRRMLTQDPKKRITAAQVLEHPWLKES 153
++ V + L ++P +R Q++ H ++K S
Sbjct: 235 FQDFVNKCLIKNPAERADLKQLMVHAFIKRS 265
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 28/147 (19%)
Query: 8 HSKGVMHRDLKPEN-FLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
HSK ++HRDLKP N FL +K +K DFGL ++ +GK R G+ Y++PE +
Sbjct: 153 HSKKLIHRDLKPSNIFLVDTKQ----VKIGDFGLVTSLKNDGKRTRSK-GTLRYMSPEQI 207
Query: 66 RRR-YGKEADIWSAGVILYILL--CG----VPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
+ YGKE D+++ G+IL LL C F+ D +GI +I
Sbjct: 208 SSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI-------------- 253
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVL 145
K L++++L++ P+ R +++L
Sbjct: 254 FDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YINVWYDPSEAEAPP 334
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 144 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 260
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 321 YINVWYDPSEAEAPP 335
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLS-VFIEEGKEFRDVCGSAFYVAPEVL----- 65
++HRD+KP N L D + +K DFG+S ++ + RD G Y+APE +
Sbjct: 147 IIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDA-GCRPYMAPERIDPSAS 202
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPF--WADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R+ Y +D+WS G+ LY L G P+ W + + + ++ S S
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSF 262
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWL 150
V LT+D KR ++L+HP++
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y++PE L+ Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYS 181
Query: 71 KEADIWSAGVILYILLCG---VPPFWADTDE----GIFEEIRKGEIDFQID-PWPVISSS 122
++DIWS G+ L + G +PP A D IFE +D+ ++ P P + S
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE-----LLDYIVNEPPPKLPSG 236
Query: 123 A-----KELVRRMLTQDPKKRITAAQVLEHPWLKES 153
++ V + L ++P +R Q++ H ++K S
Sbjct: 237 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 272
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 17/93 (18%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-------------C 54
HSKG+MHRDLKP N FT D V+K DFGL +++ +E + V
Sbjct: 135 HSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 55 GSAFYVAPEVLR-RRYGKEADIWSAGVILYILL 86
G+ Y++PE + Y + DI+S G+IL+ LL
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 49/197 (24%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV--CGSAFYVAPEV- 64
HS G++HRDLKP N + S + LK +DFGL+ G F V + +Y APEV
Sbjct: 145 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVI 199
Query: 65 LRRRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI- 119
L Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 259
Query: 120 ---------------------------------SSSAKELVRRMLTQDPKKRITAAQVLE 146
+S A++L+ +ML D KRI+ + L+
Sbjct: 260 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 319
Query: 147 HPWLK---ESGEASDKP 160
HP++ + EA P
Sbjct: 320 HPYINVWYDPSEAEAPP 336
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 35/171 (20%)
Query: 5 NVCHSKGVMHRDLKPENFL-FTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPE 63
N G++HR++KP N + +D +V K DFG + +E+ ++F + G+ Y+ P+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 64 -----VLRR----RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQID 114
VLR+ +YG D+WS GV Y G PF FE R+
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP------FEGPRRN------- 232
Query: 115 PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAV 165
KE++ +++T P I+ Q E+ + SG D P+ ++
Sbjct: 233 ---------KEVMYKIITGKPSGAISGVQKAENGPIDWSG---DMPVSCSL 271
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 45/195 (23%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
HS G++HRDLKP N + S + LK +DFGL+ + +Y APEV L
Sbjct: 143 HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILG 199
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWA----DTDEGIFEEIRKGEIDFQIDPWPVI--- 119
Y + DIWS G I+ ++ G F D + E++ +F P +
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTY 259
Query: 120 -------------------------------SSSAKELVRRMLTQDPKKRITAAQVLEHP 148
+S A++L+ +ML D KRI+ + L+HP
Sbjct: 260 VENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 149 WLK---ESGEASDKP 160
++ + EA P
Sbjct: 320 YINVWYDPSEAEAPP 334
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 14/139 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV---FIEEGKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 137 HAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPFW-ADTDEGIFEEIRKGEIDFQIDPWPVI 119
+R + Y ++D+++ G++LY L+ G P+ + + I E + +G + + +
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK---V 250
Query: 120 SSSAKELVRRMLTQDPKKR 138
S+ + ++R++ + KK+
Sbjct: 251 RSNCPKRMKRLMAECLKKK 269
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK-EFRDVCGSAFYVAPEVL- 65
H + +++RDLKPEN L D++ ++ D GL+V ++ G+ + + G+ ++APE+L
Sbjct: 306 HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D ++ GV LY ++ PF A ++ +E+++ ++ + S ++K+
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 126 LVRRMLTQDPKKRI 139
+L +DP+KR+
Sbjct: 423 FCEALLQKDPEKRL 436
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 73/139 (52%), Gaps = 14/139 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV---FIEEGKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 137 HAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPFW-ADTDEGIFEEIRKGEIDFQIDPWPVI 119
+R + Y ++D+++ G++LY L+ G P+ + + I E + +G + + +
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK---V 250
Query: 120 SSSAKELVRRMLTQDPKKR 138
S+ + ++R++ + KK+
Sbjct: 251 RSNCPKRMKRLMAECLKKK 269
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK-EFRDVCGSAFYVAPEVL- 65
H + +++RDLKPEN L D++ ++ D GL+V ++ G+ + + G+ ++APE+L
Sbjct: 306 HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D ++ GV LY ++ PF A ++ +E+++ ++ + S ++K+
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 126 LVRRMLTQDPKKRI 139
+L +DP+KR+
Sbjct: 423 FCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK-EFRDVCGSAFYVAPEVL- 65
H + +++RDLKPEN L D++ ++ D GL+V ++ G+ + + G+ ++APE+L
Sbjct: 306 HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D ++ GV LY ++ PF A ++ +E+++ ++ + S ++K+
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 126 LVRRMLTQDPKKRI 139
+L +DP+KR+
Sbjct: 423 FCEALLQKDPEKRL 436
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 35/171 (20%)
Query: 5 NVCHSKGVMHRDLKPENFL-FTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPE 63
N G++HR++KP N + +D +V K DFG + +E+ ++F + G+ Y+ P+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 64 -----VLRR----RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQID 114
VLR+ +YG D+WS GV Y G PF FE R+
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP------FEGPRRN------- 232
Query: 115 PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKESGEASDKPIDTAV 165
KE++ +++T P I+ Q E+ + SG D P+ ++
Sbjct: 233 ---------KEVMYKIITGKPSGAISGVQKAENGPIDWSG---DMPVSCSL 271
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 56/210 (26%)
Query: 8 HSKGVMHRDLKPENFLFTSK-DENAVLKAIDFGLS-VFIEEGKEFRD---VCGSAFYVAP 62
H+ V+HRDLKP N L + E +K D G + +F K D V + +Y AP
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 63 EVL--RRRYGKEADIWSAGVILYILLCGVP-------------PFWADTDEGIF------ 101
E+L R Y K DIW+ G I LL P P+ D + IF
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 264
Query: 102 -----EEIRKGE------IDFQIDPWPVIS-------------SSAKELVRRMLTQDPKK 137
E+I+K DF+ + + S S A L++++LT DP K
Sbjct: 265 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIK 324
Query: 138 RITAAQVLEHPWLKESGEASDKPIDTAVLF 167
RIT+ Q ++ P+ E P+ T+ +F
Sbjct: 325 RITSEQAMQDPYFLED------PLPTSDVF 348
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK-EFRDVCGSAFYVAPEVL- 65
H + +++RDLKPEN L D++ ++ D GL+V ++ G+ + + G+ ++APE+L
Sbjct: 306 HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 66 RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y D ++ GV LY ++ PF A ++ +E+++ ++ + S ++K+
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD 422
Query: 126 LVRRMLTQDPKKRI 139
+L +DP+KR+
Sbjct: 423 FCEALLQKDPEKRL 436
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 20/154 (12%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD-VCGSAFYVAPE 63
+ HS+ +HRD+K N L + E +K DFG++ + + + R+ G+ F++APE
Sbjct: 130 DYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 186
Query: 64 VLRRR-YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI--DPWPVI- 119
V+++ Y +ADIWS G+ L G PP ++D + + F I + P +
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPP---NSD------LHPMRVLFLIPKNSPPTLE 237
Query: 120 ---SSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
S KE V L +DP+ R TA ++L+H ++
Sbjct: 238 GQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 148 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 204
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + Y ++D+++ G++LY L+ G P+
Sbjct: 205 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+ Q++++ F D D +GT+ ELK LG ++ ++K+ + D +G G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 250 DYIEFITATMQR-HKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEY--NMGDDATIK 306
++ +F+T Q+ + + E + KAF+ FD D I+ L+ KE N+ D+ ++
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-LQ 143
Query: 307 EIMSEVDRDKDGRISYDEFCAMMKR 331
E + E DRD DG +S EF + K+
Sbjct: 144 EXIDEADRDGDGEVSEQEFLRIXKK 168
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 149 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + Y ++D+++ G++LY L+ G P+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 161 IDTAVLFRMKQFMAMNXXXXXXXXVIVENLP--TEEIQKLKQKFTEMDTDKSGTLSYDEL 218
I VL MK +M + ++ L I+ + + F ++DT+ +G+LS+ E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 219 KAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFD 278
LA +G +++ D+ + +QA DI+ G I Y EF+ + +E L AF D
Sbjct: 62 YTVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIES-TFLKAAFNKID 118
Query: 279 KDNDRYIT 286
KD D YI+
Sbjct: 119 KDEDGYIS 126
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE---FRDVCGSAF---YVAPEVLR 66
+HRDL N L S N V K DFGLS F+EE + G + APE +
Sbjct: 138 VHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R++ +D WS G++++ ++ G P+W +++ + I E D+++ P P +S
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLH 251
Query: 125 ELVRRMLTQDPKKRITAAQVL 145
+L+ +D R QV+
Sbjct: 252 QLMLDCWQKDRNARPRFPQVV 272
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 126 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + Y ++D+++ G++LY L+ G P+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 123 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 179
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + Y ++D+++ G++LY L+ G P+
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 126 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + Y ++D+++ G++LY L+ G P+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 121 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + Y ++D+++ G++LY L+ G P+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 121 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + Y ++D+++ G++LY L+ G P+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 509 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 622
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 623 SLMTKCWAYDPSRR 636
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK----EFRDVCG--SAFYVAPEVLR 66
+HRDL N L S N V K DFGLS F+EE E + G + APE +
Sbjct: 140 VHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R++ +D WS G++++ ++ G P+W +++ + I E D+++ P P +S
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLH 253
Query: 125 ELVRRMLTQDPKKRITAAQVL 145
+L+ +D R QV+
Sbjct: 254 QLMLDCWQKDRNARPRFPQVV 274
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 131 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 187
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 244
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 245 SLMTKCWAYDPSRR 258
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 157 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 213
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 270
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 271 SLMTKCWAYDPSRR 284
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 132 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 188
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 245
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 246 SLMTKCWAYDPSRR 259
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 134 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 247
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 248 SLMTKCWAYDPSRR 261
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 129 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 242
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 243 SLMTKCWAYDPSRR 256
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 126 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 239
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 240 SLMTKCWAYDPSRR 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 129 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 242
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 243 SLMTKCWAYDPSRR 256
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 14/94 (14%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK-----EFRDVCGSAFYVAP 62
H+K ++HRDLK N E+ +K DFGL+ E+ + +F + GS ++AP
Sbjct: 141 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAP 195
Query: 63 EVLRRR----YGKEADIWSAGVILYILLCGVPPF 92
EV+R + Y ++D+++ G++LY L+ G P+
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 28/147 (19%)
Query: 8 HSKGVMHRDLKPEN-FLFTSKDENAVLKAIDFGLSVFIE-EGKEFRDVCGSAFYVAPEVL 65
HSK +++RDLKP N FL +K +K DFGL ++ +GK R G+ Y++PE +
Sbjct: 139 HSKKLINRDLKPSNIFLVDTKQ----VKIGDFGLVTSLKNDGKRXRSK-GTLRYMSPEQI 193
Query: 66 RRR-YGKEADIWSAGVILYILL--CG----VPPFWADTDEGIFEEIRKGEIDFQIDPWPV 118
+ YGKE D+++ G+IL LL C F+ D +GI +I
Sbjct: 194 SSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI-------------- 239
Query: 119 ISSSAKELVRRMLTQDPKKRITAAQVL 145
K L++++L++ P+ R +++L
Sbjct: 240 FDKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSV---FIEEGKEFRDVCGSAFYVAPEV 64
H+K ++HRDLK N E+ +K DFGL+ +F + GS ++APEV
Sbjct: 149 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + Y ++D+++ G++LY L+ G P+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 12 VMHRDLKPENFLFTSKDENA-----VLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR 66
++HRDLK N L K EN +LK DFGL+ + G+ ++APEV+R
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM-SAAGAYAWMAPEVIR 187
Query: 67 RR-YGKEADIWSAGVILYILLCGVPPF 92
+ K +D+WS GV+L+ LL G PF
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 14/94 (14%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK-----EFRDVCGSAFYVAP 62
H+K ++HRDLK N E+ +K DFGL+ E+ + +F + GS ++AP
Sbjct: 121 HAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAP 175
Query: 63 EVLRRR----YGKEADIWSAGVILYILLCGVPPF 92
EV+R + Y ++D+++ G++LY L+ G P+
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE---FRDVCGSAF---YVAPEVLR 66
+HRDL N L S N V K DFGLS F+E+ + G + APE ++
Sbjct: 157 VHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R++ +D+WS G++++ ++ G P+W T++ + I E D+++ P S+
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDYRLPPPMDCPSALH 270
Query: 125 ELVRRMLTQDPKKRITAAQVLE 146
+L+ +D R Q++
Sbjct: 271 QLMLDCWQKDRNHRPKFGQIVN 292
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRRR 68
++ ++HRD+KP+N L DE+ + DF ++ + + + G+ Y+APE+ R
Sbjct: 133 NQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 69 ----YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDP--WPVISSS 122
Y D WS GV Y LL G P+ + E + E P W S
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW---SQE 246
Query: 123 AKELVRRMLTQDPKKRITA-AQVLEHPWLKE 152
L++++L +P +R + + V P++ +
Sbjct: 247 MVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H++ V++RDLKP N L DE+ ++ D GL+ + K V G+ Y+APEVL++
Sbjct: 309 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQK 364
Query: 68 --RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y AD +S G +L+ LL G PF + EI + + ++ S +
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELRS 423
Query: 126 LVRRMLTQDPKKRI-----TAAQVLEHPWLK 151
L+ +L +D +R+ A +V E P+ +
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H++ V++RDLKP N L DE+ ++ D GL+ + K V G+ Y+APEVL++
Sbjct: 308 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQK 363
Query: 68 --RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y AD +S G +L+ LL G PF + EI + + ++ S +
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELRS 422
Query: 126 LVRRMLTQDPKKRI-----TAAQVLEHPWLK 151
L+ +L +D +R+ A +V E P+ +
Sbjct: 423 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L ++ D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 509 SKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 622
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 623 SLMTKCWAYDPSRR 636
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H++ V++RDLKP N L DE+ ++ D GL+ + K V G+ Y+APEVL++
Sbjct: 309 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQK 364
Query: 68 --RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y AD +S G +L+ LL G PF + EI + + ++ S +
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELRS 423
Query: 126 LVRRMLTQDPKKRI-----TAAQVLEHPWLK 151
L+ +L +D +R+ A +V E P+ +
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
H++ V++RDLKP N L DE+ ++ D GL+ + K V G+ Y+APEVL++
Sbjct: 309 HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQK 364
Query: 68 --RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKE 125
Y AD +S G +L+ LL G PF + EI + + ++ S +
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELRS 423
Query: 126 LVRRMLTQDPKKRI-----TAAQVLEHPWLK 151
L+ +L +D +R+ A +V E P+ +
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 14/134 (10%)
Query: 202 FTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQ----AADIDGNGTIDYIEF--I 255
F ++D + G++SY+E+KA + S+ R + +Q +Q A DIDGNG ID EF
Sbjct: 6 FKQLDANGDGSVSYEEVKAFV----SSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 256 TATMQRHKL-ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDATIKEIMSEVDR 314
A ++ L + L ++ D D D +T +E+ T FK++ G + + +IM + D
Sbjct: 62 AAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKF--GYEKVVDQIM-KADA 118
Query: 315 DKDGRISYDEFCAM 328
+ DG I+ +EF A
Sbjct: 119 NGDGYITLEEFLAF 132
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L +S D +K DFGLS ++E+ + G ++APE +
Sbjct: 129 SKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESIN 185
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 242
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 243 SLMTKCWAYDPSRR 256
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF--YVAPEVLR 66
SK +HRD+ N L ++ D +K DFGLS ++E+ ++ G ++APE +
Sbjct: 129 SKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
RR+ +D+W GV ++ IL+ GV PF + + I GE ++ P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLY 242
Query: 125 ELVRRMLTQDPKKR 138
L+ + DP +R
Sbjct: 243 SLMTKCWAYDPSRR 256
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 81/228 (35%), Gaps = 83/228 (36%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFI----------------EEG- 47
N H G++HRDLKP N L +++ +K DFGL+ I E G
Sbjct: 143 NFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 48 ------KEFRDVCGSAFYVAPE--VLRRRYGKEADIWSAGVIL----------------- 82
K+ + +Y APE +L+ Y K DIWS G I
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259
Query: 83 YILLCGVPPFWADTDEG---------------IF-----------EEIRKGEIDFQIDPW 116
+ L G F D IF + I K E+ I +
Sbjct: 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLF 319
Query: 117 P------------VISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
P IS L+ ML +P KRIT Q L+HP+LK+
Sbjct: 320 PHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDVCG--SAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS IE+ E + G + APE ++
Sbjct: 165 GYVHRDLAARNILVNS---NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++++ ++ G P+W +++ + + I +G
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 28/154 (18%)
Query: 12 VMHRDLKPENFLFTSKDENAVL--KAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL---R 66
++HRDL+ N S DENA + K DFGLS + + G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
Y ++AD +S +ILY +L G EG F+E G+I F I+ +E
Sbjct: 203 ESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKF-------INMIREEG 246
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
+R + +D R+ V+E W SG+ +P
Sbjct: 247 LRPTIPEDCPPRLR--NVIELCW---SGDPKKRP 275
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE---FRDVCGSAF---YVAPEVLR 66
+HR L N L S N V K DFGLS F+E+ + G + APE ++
Sbjct: 131 VHRALAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
R++ +D+WS G++++ ++ G P+W T++ + I E D+++ P S+
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDYRLPPPMDCPSALH 244
Query: 125 ELVRRMLTQDPKKRITAAQVLE 146
+L+ +D R Q++
Sbjct: 245 QLMLDCWQKDRNHRPKFGQIVN 266
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+ Q++ + F+ D + G L Y ELK + LG L + ++ + D +G +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 250 DYIEFITATMQR-HKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATI 305
Y +F ++ K + + + +AFQ FD D+ I++ L KE +G+ D +
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKE--LGETLTDEEL 134
Query: 306 KEIMSEVDRDKDGRISYDEFCAM 328
+ ++ E D D DG I+ +EF A+
Sbjct: 135 RAMIEEFDLDGDGEINENEFIAI 157
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 33/122 (27%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL--------------------------- 40
H G++HRD+KP NFL+ + + L +DFGL
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQN 191
Query: 41 --SVFIEEGKEFRDVCGSAFYVAPEVLRRRYGKEA--DIWSAGVILYILLCGVPPFWADT 96
S+ + ++ G+ + APEVL + + D+WSAGVI LL G PF+ +
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 97 DE 98
D+
Sbjct: 252 DD 253
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRDVCGSAFYVAPEV 64
H+K ++HRD+K N E +K DFGL+ ++ GS ++APEV
Sbjct: 149 HAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 65 LRRR----YGKEADIWSAGVILYILLCGVPPF 92
+R + + ++D++S G++LY L+ G P+
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I +++ ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y+APE L+ Y
Sbjct: 136 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMAPERLQGTHYS 191
Query: 71 KEADIWSAGVILYILLCG---VPPFWADTDEGIF 101
++DIWS G+ L L G +PP A E IF
Sbjct: 192 VQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 39/185 (21%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD------VCGSAFYVA 61
HS+ ++H D+K +N L +S +A L DFG +V ++ +D + G+ ++A
Sbjct: 183 HSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMA 240
Query: 62 PE-VLRRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI--DPWPV 118
PE VL R + D+WS+ ++ +L G P + + +G + +I +P PV
Sbjct: 241 PEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP---------WTQFFRGPLCLKIASEPPPV 291
Query: 119 --ISSSAKEL----VRRMLTQDPKKRITAAQV-------------LEHPWLKESGEASDK 159
I S L ++ L ++P R++AA++ L+ PW E E
Sbjct: 292 REIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPRHP 351
Query: 160 PIDTA 164
P + A
Sbjct: 352 PPNQA 356
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 75/204 (36%), Gaps = 59/204 (28%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKDE----------------NAVLKAIDFGLSVFIEEG 47
N HS + H DLKPEN LF D N +K +DFG + + +E
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH 190
Query: 48 KEFRDVCGSAFYVAPEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTD-------EG 99
+ + Y APEV L + + D+WS G IL G F E
Sbjct: 191 HS--TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 100 IFEEIRKGEID-------FQID--PWPVISSSAK------------------------EL 126
I + K I F D W SS+ + +L
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 127 VRRMLTQDPKKRITAAQVLEHPWL 150
+++ML DP KRIT + L+HP+
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFF 332
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 51/209 (24%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE-----FRDVCGSAFYVAP 62
H ++HRD+K N L T + VLK DFGL+ K + + + +Y P
Sbjct: 142 HRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 63 EVL--RRRYGKEADIWSAGVILYIL---------------------LCG--VPPFWADTD 97
E+L R YG D+W AG I+ + LCG P W + D
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 98 E-GIFE--EIRKGE--------IDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLE 146
++E E+ KG+ + DP+ A +L+ ++L DP +RI + L
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAYVRDPY------ALDLIDKLLVLDPAQRIDSDDALN 312
Query: 147 HPWLKESGEASD-KPIDTAVLFRMKQFMA 174
H + SD K + + L M +++A
Sbjct: 313 HDFFWSDPMPSDLKGMLSTHLTSMFEYLA 341
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 41/204 (20%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE-----FRDVCGSAFYVAP 62
H ++HRD+K N L T + VLK DFGL+ K + + + +Y P
Sbjct: 141 HRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 63 EVL--RRRYGKEADIWSAGVILYIL---------------------LCG--VPPFWADTD 97
E+L R YG D+W AG I+ + LCG P W + D
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 98 E-GIFEEI-----RKGEIDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
++E++ +K ++ ++ + V A +L+ ++L DP +RI + L H +
Sbjct: 258 NYELYEKLELVKGQKRKVKDRLKAY-VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 316
Query: 152 ESGEASD-KPIDTAVLFRMKQFMA 174
SD K + + L M +++A
Sbjct: 317 SDPMPSDLKGMLSTHLTSMFEYLA 340
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 14 HRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGK--EFRDVCGSAFYVAPEVLRRRYGK 71
HRD+KPEN L S D+ A L +DFG++ + K + + G+ +Y APE +
Sbjct: 157 HRDVKPENILV-SADDFAYL--VDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 72 -EADIWSAGVILYILLCGVPPFWAD 95
ADI++ +LY L G PP+ D
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGD 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 20/122 (16%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD------VCGSAFYVA 61
H++ ++HRD+K N L DEN V K DFG+S ++G E V G+ Y+
Sbjct: 156 HTRAIIHRDVKSINILL---DENFVPKITDFGIS---KKGTELDQTHLXXVVKGTLGYID 209
Query: 62 PE-VLRRRYGKEADIWSAGVILYILLCG-------VPPFWADTDEGIFEEIRKGEIDFQI 113
PE ++ R +++D++S GV+L+ +LC +P + E E G+++ +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 114 DP 115
DP
Sbjct: 270 DP 271
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 20/122 (16%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRD------VCGSAFYVA 61
H++ ++HRD+K N L DEN V K DFG+S ++G E V G+ Y+
Sbjct: 156 HTRAIIHRDVKSINILL---DENFVPKITDFGIS---KKGTELGQTHLXXVVKGTLGYID 209
Query: 62 PE-VLRRRYGKEADIWSAGVILYILLCG-------VPPFWADTDEGIFEEIRKGEIDFQI 113
PE ++ R +++D++S GV+L+ +LC +P + E E G+++ +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 114 DP 115
DP
Sbjct: 270 DP 271
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLRR 67
HS G+++ DLKPEN + T + LK ID G + F + G+ + APE++R
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQ----LKLIDLGA---VSRINSFGYLYGTPGFQAPEIVRT 251
Query: 68 RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
DI++ G L L +P +G+ E+ DP S L+
Sbjct: 252 GPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPED----------DPVLKTYDSYGRLL 301
Query: 128 RRMLTQDPKKRITAAQ 143
RR + DP++R T A+
Sbjct: 302 RRAIDPDPRQRFTTAE 317
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL IE+ E+ G+ F + APE L R
Sbjct: 303 VHRDLRAANILV---GENLVCKVADFGLGRLIED-NEYTARQGAKFPIKWTAPEAALYGR 358
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 415
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 416 CQCWRKDPEERPT 428
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 40/187 (21%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE-----FRDVCGSAFYVAP 62
H ++HRD+K N L T + VLK DFGL+ K + + + +Y P
Sbjct: 142 HRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 63 EVL--RRRYGKEADIWSAGVI---------------------LYILLCG--VPPFWADTD 97
E+L R YG D+W AG I L LCG P W + D
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 98 E-GIFE--EIRKGE---IDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
++E E+ KG+ + ++ + V A +L+ ++L DP +RI + L H +
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAY-VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 317
Query: 152 ESGEASD 158
SD
Sbjct: 318 SDPMPSD 324
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 167 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 223
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 224 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 280
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 281 YMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 40/187 (21%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE-----FRDVCGSAFYVAP 62
H ++HRD+K N L T + VLK DFGL+ K + + + +Y P
Sbjct: 142 HRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 63 EVL--RRRYGKEADIWSAGVILYIL---------------------LCG--VPPFWADTD 97
E+L R YG D+W AG I+ + LCG P W + D
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 98 E-GIFE--EIRKGE---IDFQIDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
++E E+ KG+ + ++ + V A +L+ ++L DP +RI + L H +
Sbjct: 259 NYELYEKLELVKGQKRKVKDRLKAY-VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 317
Query: 152 ESGEASD 158
SD
Sbjct: 318 SDPMPSD 324
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 164 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 220
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 221 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 277
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 278 YMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 28/149 (18%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RR 68
K ++HRDLKP N L + VLK DFG + I+ + GSA ++APEV
Sbjct: 125 KALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN 180
Query: 69 YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELVR 128
Y ++ D++S G+IL+ ++ T F+EI G F+I W V + + L++
Sbjct: 181 YSEKCDVFSWGIILWEVI---------TRRKPFDEI--GGPAFRIM-WAVHNGTRPPLIK 228
Query: 129 -----------RMLTQDPKKRITAAQVLE 146
R ++DP +R + ++++
Sbjct: 229 NLPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 162 SQKCIHRDLTARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 218
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 219 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 275
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 276 YMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF----RDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + APE +
Sbjct: 144 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++++ ++ G P+W T++ + + + +G
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 28/149 (18%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RR 68
K ++HRDLKP N L + VLK DFG + I+ + GSA ++APEV
Sbjct: 124 KALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN 179
Query: 69 YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELVR 128
Y ++ D++S G+IL+ ++ T F+EI G F+I W V + + L++
Sbjct: 180 YSEKCDVFSWGIILWEVI---------TRRKPFDEI--GGPAFRIM-WAVHNGTRPPLIK 227
Query: 129 -----------RMLTQDPKKRITAAQVLE 146
R ++DP +R + ++++
Sbjct: 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I ++ ++APE L
Sbjct: 221 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 277
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 278 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 334
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 335 YMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSA----FYVAPEVLR 66
G +HRDL N L D N V K DFGLS +E+ + + APE +
Sbjct: 171 GYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R + +D+WS GV+++ +L G P+W T+ + + +G
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 191
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 191
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 191
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 191
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I ++ ++APE L
Sbjct: 168 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 281
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 191
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 191
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I ++ ++APE L
Sbjct: 168 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 281
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I ++ ++APE L
Sbjct: 161 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 217
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 218 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 274
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 275 YMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I ++ ++APE L
Sbjct: 157 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 213
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 214 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 270
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 271 YMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I ++ ++APE L
Sbjct: 153 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 209
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 266
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 267 YMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I ++ ++APE L
Sbjct: 168 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 224
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 281
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 74/204 (36%), Gaps = 59/204 (28%)
Query: 4 ANVCHSKGVMHRDLKPENFLFTSKDE----------------NAVLKAIDFGLSVFIEEG 47
N HS + H DLKPEN LF D N +K +DFG + + +E
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH 190
Query: 48 KEFRDVCGSAFYVAPEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTD-------EG 99
+ Y APEV L + + D+WS G IL G F E
Sbjct: 191 HS--TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 100 IFEEIRKGEID-------FQID--PWPVISSSAK------------------------EL 126
I + K I F D W SS+ + +L
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 127 VRRMLTQDPKKRITAAQVLEHPWL 150
+++ML DP KRIT + L+HP+
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFF 332
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE--FRDVCG--SAFYVAPEVLR 66
G +HRDL N L D N V K DFGLS +E+ + + G + APE +
Sbjct: 171 GYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R + +D+WS GV+++ +L G P+W T+ + + +G
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I ++ ++APE L
Sbjct: 160 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 216
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 217 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 273
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 274 YMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 127 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 182
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 239
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 240 CQCWRKDPEERPT 252
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK 263
GTID+ EF+T ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK 263
GTID+ EF+T ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE---FRDVCGSAFYVA 61
N H +HRD+K N L DE K DFGL+ E+ + + G+ Y+A
Sbjct: 147 NFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMA 203
Query: 62 PEVLRRRYGKEADIWSAGVILYILLCGVP 90
PE LR ++DI+S GV+L ++ G+P
Sbjct: 204 PEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I ++ ++APE L
Sbjct: 209 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 265
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 266 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 322
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 323 YMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 125 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 180
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 237
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 238 CQCWRKDPEERPT 250
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE---FRDVCGSAFYVA 61
N H +HRD+K N L DE K DFGL+ E+ + + G+ Y+A
Sbjct: 147 NFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMA 203
Query: 62 PEVLRRRYGKEADIWSAGVILYILLCGVP 90
PE LR ++DI+S GV+L ++ G+P
Sbjct: 204 PEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK 263
GTID+ EF+T ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK 263
GTID+ EF+T ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 12 VMHRDLKPENFLFTSKDENAVL--KAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL---R 66
++HRDL+ N S DENA + K DFG S + + G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
Y ++AD +S +ILY +L G EG F+E G+I F I+ +E
Sbjct: 203 ESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKF-------INMIREEG 246
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
+R + +D R+ V+E W SG+ +P
Sbjct: 247 LRPTIPEDCPPRLR--NVIELCW---SGDPKKRP 275
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
++ T+ ++LK+ F D D++G +S EL+ + LG L + +V+Q ++ AD+DG+G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 249 IDYIEFITATM 259
++Y EF+ M
Sbjct: 62 VNYEEFVKMMM 72
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E L +AF+ FDKD + YI+ EL N+G+ D +++++ E D D DG+++Y+E
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 325 FCAMM 329
F MM
Sbjct: 67 FVKMM 71
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 167 GAVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 385 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 440
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 497
Query: 128 RRMLTQDPKKRIT 140
+ ++P++R T
Sbjct: 498 CQCWRKEPEERPT 510
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 193 EEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYI 252
+++ + K+ F D++++G ++ + L+ L + G + + AD GNG I +
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 253 EFITATMQRHKLERFEH-LDKAFQYFDKDNDRYITVDELETAFKEYNMGDDATIKEIMS- 310
EF++ +R K E L +AF+ FD + YI L+ A N+GD E
Sbjct: 63 EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDAL--LNLGDRLKPHEFAEF 120
Query: 311 -EVDRDKDGRISYDEFCAMM 329
+ + G+I YD F M
Sbjct: 121 LGITETEKGQIRYDNFINTM 140
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 272 KAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYDEFCAMMK 330
+AF+ FD + +IT + L+T K++ + + A E+ +E D +G+I + EF +MM
Sbjct: 10 EAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMG 69
Query: 331 R 331
R
Sbjct: 70 R 70
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 302 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 357
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 414
Query: 128 RRMLTQDPKKRIT 140
+ ++P++R T
Sbjct: 415 CQCWRKEPEERPT 427
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVA 61
N H +HRD+K N L DE K DFGL+ E+ + + G+ Y+A
Sbjct: 141 NFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMA 197
Query: 62 PEVLRRRYGKEADIWSAGVILYILLCGVP 90
PE LR ++DI+S GV+L ++ G+P
Sbjct: 198 PEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 302 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 357
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 414
Query: 128 RRMLTQDPKKRIT 140
+ ++P++R T
Sbjct: 415 CQCWRKEPEERPT 427
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 302 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 357
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 414
Query: 128 RRMLTQDPKKRIT 140
+ ++P++R T
Sbjct: 415 CQCWRKEPEERPT 427
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V++ DFGL+ I ++ ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
++H DLKPEN L + +A+ K +DFG S + G+ S FY +PEVL Y
Sbjct: 180 IIHCDLKPENILLCNPKRSAI-KIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 71 KEADIWSAGVILYILLCGVPPF 92
D+WS G IL + G P F
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLF 258
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
K+L+ RML DPK RI L+H + K++ +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
L E+ Q++++ F DTD SGT+ ELK + LG ++ ++K+ + D DG+GT
Sbjct: 23 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGT 82
Query: 249 IDYIEFIT 256
ID+ EF+T
Sbjct: 83 IDFEEFLT 90
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNM-GDDATIKEIMSEVDRDKDGRISYD 323
E+ + + +AF FD D I EL+ A + IK+++SE+D+D G I ++
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 324 EFCAMM 329
EF MM
Sbjct: 87 EFLTMM 92
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 12 VMHRDLKPENFLFTSKDENAVL--KAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL---R 66
++HRDL+ N S DENA + K DF LS + + G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
Y ++AD +S +ILY +L G EG F+E G+I F I+ +E
Sbjct: 203 ESYTEKADTYSFAMILYTILTG---------EGPFDEYSYGKIKF-------INMIREEG 246
Query: 127 VRRMLTQDPKKRITAAQVLEHPWLKESGEASDKP 160
+R + +D R+ V+E W SG+ +P
Sbjct: 247 LRPTIPEDCPPRLR--NVIELCW---SGDPKKRP 275
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 8 HSK-GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
HSK V+HRD+KP N L + + +K DFG+S ++ + G Y+APE +
Sbjct: 170 HSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERIN 226
Query: 66 ----RRRYGKEADIWSAGVILYILLCGVPPF--WADTDEGIFEEIRKGEIDFQIDPWPVI 119
++ Y ++DIWS G+ + L P+ W + + + + + D +
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF--- 283
Query: 120 SSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
S+ + + L ++ K+R T ++++HP+
Sbjct: 284 SAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---------------RDVCGS 56
++HRDLK EN L +++ +K DFG + I ++ R+ +
Sbjct: 159 IIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT--T 213
Query: 57 AFYVAPEVL----RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQ 112
Y PE++ G++ DIW+ G ILY+L PF ++G I G+ +
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGK--YS 267
Query: 113 IDPWPVISSSAKELVRRMLTQDPKKRITAAQVLEH 147
I P + L+R ML +P++R++ A+V+
Sbjct: 268 IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 165 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 221
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 167 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
++H DLKPEN L + +A+ K +DFG S + G+ S FY +PEVL Y
Sbjct: 161 IIHCDLKPENILLCNPKRSAI-KIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPYD 217
Query: 71 KEADIWSAGVILYILLCGVPPF 92
D+WS G IL + G P F
Sbjct: 218 LAIDMWSLGCILVEMHTGEPLF 239
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
K+L+ RML DPK RI L+H + K++ +
Sbjct: 331 KDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 362
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 138 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 167 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 138 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 136 VHRDLAAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 191
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G F G+ F + APE L
Sbjct: 128 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLA 183
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVY 240
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 167 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 167 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 167 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 167 GFVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
++P +E++++++ F D D +G +S EL + LG EV+++ +Q D+DG+G
Sbjct: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
Query: 249 IDYIEFIT 256
+D+ EF+T
Sbjct: 89 VDFEEFVT 96
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYN-MGDDATIKEIMSEVDRDKDGRISYD 323
+ E + +AF+ FD+D + +I+ EL TA + M ++ ++ I+ +D D DG++ ++
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 324 EFCAMM 329
EF ++
Sbjct: 93 EFVTLL 98
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFIT 256
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 247 GTIDYIEFIT 256
GTID+ EF+T
Sbjct: 62 GTIDFPEFLT 71
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 68 EFLTMMAR 75
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGLS +E+ E R + +PE +
Sbjct: 155 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I + ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N L T EN V+K DFGL+ I + ++APE L
Sbjct: 175 SQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEAL 231
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+++ I G P+ E +F+ +++G ++D ++
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH---RMDKPANCTNEL 288
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFIT 256
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 54/193 (27%)
Query: 11 GVMHRDLKPENFLFTSKD--ENAV-LKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
G++H D+KPEN L D EN + +K D G + + +E + + + Y +PEV L
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLG 209
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEG------------IFE--------EIRK 106
+G ADIWS +++ L+ G F + DEG I E +R
Sbjct: 210 APWGCGADIWSTACLIFELITG--DFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 267
Query: 107 GEID-------------FQIDPWPV----------ISSSAKEL---VRRMLTQDPKKRIT 140
G+ ++ WP+ AKE+ + ML DP+KR
Sbjct: 268 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327
Query: 141 AAQVLEHPWLKES 153
A ++ HPWLK++
Sbjct: 328 AGGLVNHPWLKDT 340
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 188 ENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNG 247
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 248 TIDYIEFIT 256
TID+ EF+T
Sbjct: 62 TIDFPEFLT 70
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 54/193 (27%)
Query: 11 GVMHRDLKPENFLFTSKD--ENAV-LKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV-LR 66
G++H D+KPEN L D EN + +K D G + + +E + + + Y +PEV L
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLG 209
Query: 67 RRYGKEADIWSAGVILYILLCGVPPFWADTDEG------------IFE--------EIRK 106
+G ADIWS +++ L+ G F + DEG I E +R
Sbjct: 210 APWGCGADIWSTACLIFELITG--DFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 267
Query: 107 GEID-------------FQIDPWPV----------ISSSAKEL---VRRMLTQDPKKRIT 140
G+ ++ WP+ AKE+ + ML DP+KR
Sbjct: 268 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327
Query: 141 AAQVLEHPWLKES 153
A ++ HPWLK++
Sbjct: 328 AGGLVNHPWLKDT 340
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR-R 67
V+HRDL N L EN V+K DFG++ F+ + ++ G+ F + +PEV
Sbjct: 122 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 177
Query: 68 RYGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
RY ++D+WS GV+++ + G P+ ++ + E+I G F++ + S+ ++
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQI 234
Query: 127 VRRMLTQDPKKRITAAQVL 145
+ + P+ R +++L
Sbjct: 235 MNHCWKERPEDRPAFSRLL 253
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR-R 67
V+HRDL N L EN V+K DFG++ F+ + ++ G+ F + +PEV
Sbjct: 124 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 179
Query: 68 RYGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
RY ++D+WS GV+++ + G P+ ++ + E+I G F++ + S+ ++
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQI 236
Query: 127 VRRMLTQDPKKRITAAQVL 145
+ + P+ R +++L
Sbjct: 237 MNHCWKERPEDRPAFSRLL 255
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR-R 67
V+HRDL N L EN V+K DFG++ F+ + ++ G+ F + +PEV
Sbjct: 144 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 199
Query: 68 RYGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
RY ++D+WS GV+++ + G P+ ++ + E+I G F++ + S+ ++
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQI 256
Query: 127 VRRMLTQDPKKRITAAQVL 145
+ + P+ R +++L
Sbjct: 257 MNHCWKERPEDRPAFSRLL 275
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+ Q++ + F+ D + G L Y ELK LG L + ++ + D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 250 DYIEFITATMQR-HKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDATIKEI 308
Y +F ++ K + + + +AFQ FD D+ I++ L KE +G+ T +E+
Sbjct: 77 KYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKE--LGETLTDEEL 134
Query: 309 ---MSEVDRDKDGRISYDEFCAM 328
+ E D D DG I+ +EF A+
Sbjct: 135 RAXIEEFDLDGDGEINENEFIAI 157
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL N L EN V+K DFGLS I ++ A ++ PE + R
Sbjct: 196 VHRDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR 252
Query: 69 YGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEI 109
Y E+D+W+ GV+L+ I G+ P++ E + +R G I
Sbjct: 253 YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI 294
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVA 61
N H +HRD+K N L DE K DFGL+ E+ + + G+ Y A
Sbjct: 138 NFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXA 194
Query: 62 PEVLRRRYGKEADIWSAGVILYILLCGVP 90
PE LR ++DI+S GV+L ++ G+P
Sbjct: 195 PEALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
++H DLKPEN L + A+ K +DFG S + G+ S FY +PEVL Y
Sbjct: 180 IIHCDLKPENILLCNPKRXAI-KIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 71 KEADIWSAGVILYILLCGVPPF 92
D+WS G IL + G P F
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLF 258
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 124 KELVRRMLTQDPKKRITAAQVLEHPWLKESGE 155
K+L+ RML DPK RI L+H + K++ +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR-R 67
V+HRDL N L EN V+K DFG++ F+ + ++ G+ F + +PEV
Sbjct: 124 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 179
Query: 68 RYGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
RY ++D+WS GV+++ + G P+ ++ + E+I G F++ + S+ ++
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQI 236
Query: 127 VRRMLTQDPKKRITAAQVL 145
+ + P+ R +++L
Sbjct: 237 MNHCWKERPEDRPAFSRLL 255
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR-R 67
V+HRDL N L EN V+K DFG++ F+ + ++ G+ F + +PEV
Sbjct: 127 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 182
Query: 68 RYGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
RY ++D+WS GV+++ + G P+ ++ + E+I G F++ + S+ ++
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQI 239
Query: 127 VRRMLTQDPKKRITAAQVL 145
+ + P+ R +++L
Sbjct: 240 MNHCWRERPEDRPAFSRLL 258
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR-R 67
V+HRDL N L EN V+K DFG++ F+ + ++ G+ F + +PEV
Sbjct: 125 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 180
Query: 68 RYGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKEL 126
RY ++D+WS GV+++ + G P+ ++ + E+I G F++ + S+ ++
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQI 237
Query: 127 VRRMLTQDPKKRITAAQVL 145
+ + P+ R +++L
Sbjct: 238 MNHCWRERPEDRPAFSRLL 256
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 133 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 188
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 245
Query: 128 RRMLTQDPKKRIT 140
+ ++P++R T
Sbjct: 246 CQCWRKEPEERPT 258
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L T E+ V+K DFGL+ I + ++APE L
Sbjct: 168 SKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEAL 224
Query: 66 -RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
R Y ++D+WS GV+L+ I G P+ E +F+ +++G ++D ++
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNEL 281
Query: 124 KELVRRMLTQDPKKRITAAQVLE 146
++R P +R T Q++E
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS ++HRD+K N L + E ++K DFG + + F G+ +++APEV+
Sbjct: 171 HSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILA 224
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEID-FQIDPWPVISSS 122
+Y + D+WS G+ L PP + I + E Q W S
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEY 281
Query: 123 AKELVRRMLTQDPKKRITAAQVLEH 147
+ V L + P+ R T+ +L+H
Sbjct: 282 FRNFVDSCLQKIPQDRPTSEVLLKH 306
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 60/215 (27%)
Query: 8 HSKGVMHRDLKPENFLFTS------------KDENAV----LKAIDFGLSVFIEEGKEFR 51
H + H DLKPEN LF + +DE +V ++ +DFG + F E
Sbjct: 154 HDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHS-- 211
Query: 52 DVCGSAFYVAPEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTDE---GIFEEI--- 104
+ + Y APEV L + + D+WS G I++ G F + + E I
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGP 271
Query: 105 ---------------RKGEIDF----------QIDPWPV---ISSSAKE------LVRRM 130
+G +D+ + + P+ ++S A+E L+ M
Sbjct: 272 IPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESM 331
Query: 131 LTQDPKKRITAAQVLEHPWL-KESGEASDKPIDTA 164
L +P KR+T + L+HP+ + E +K D++
Sbjct: 332 LEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSS 366
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 129 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGR 184
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 241
Query: 128 RRMLTQDPKKRIT 140
+ ++P++R T
Sbjct: 242 CQCWRKEPEERPT 254
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E G+ F + APE L R
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEXTARQGAKFPIKWTAPEAALYGR 191
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 128 RRMLTQDPKKRIT 140
+ +DP++R T
Sbjct: 249 CQCWRKDPEERPT 261
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++LK+ F D D++G +S EL+ + LG L + +V+Q ++ AD+DG+G ++Y EF+
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 256 TATM 259
M
Sbjct: 64 KMMM 67
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E L +AF+ FDKD + YI+ EL N+G+ D +++++ E D D DG+++Y+E
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 325 FCAMM 329
F MM
Sbjct: 62 FVKMM 66
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL-- 65
HS ++HRD+K N L + E ++K DFG + + F G+ +++APEV+
Sbjct: 132 HSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILA 185
Query: 66 --RRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEID-FQIDPWPVISSS 122
+Y + D+WS G+ L PP + I + E Q W S
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEY 242
Query: 123 AKELVRRMLTQDPKKRITAAQVLEH 147
+ V L + P+ R T+ +L+H
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLLKH 267
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSA----FYVAPEVLR-R 67
+HRDL N L S N V K DFGLS +E+ E + APE + R
Sbjct: 169 VHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 68 RYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA-KE 125
++ +D+WS G++++ ++ G P+W ++ + + I G F++ P P+ SA +
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FRL-PTPMDCPSAIYQ 281
Query: 126 LVRRMLTQDPKKRITAAQVL 145
L+ + Q+ +R A ++
Sbjct: 282 LMMQCWQQERARRPKFADIV 301
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVC--GSAFYVAPEVL 65
H G +HRD+KP+N L D ++ DFG + + R + G+ Y++PE+L
Sbjct: 179 HRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235
Query: 66 R--------RRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWP 117
+ YG E D W+ GV Y + G PF+AD+ + +I + + P
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSL---P 292
Query: 118 VISSS----AKELVRRMLTQDPKKRI---TAAQVLEHPWL 150
++ A++ ++R+L P+ R+ A HP+
Sbjct: 293 LVDEGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPFF 331
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 26/152 (17%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEE---GKEFRD---VCGSAFYVA 61
HS+ ++H D+K +N L +S +A L DFG +V ++ GK + G+ ++A
Sbjct: 202 HSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMA 259
Query: 62 PE-VLRRRYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQI--DPWPV 118
PE VL R + D+WS+ ++ +L G P + + +G + +I +P PV
Sbjct: 260 PEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP---------WTQFFRGPLCLKIASEPPPV 310
Query: 119 --ISSSAKEL----VRRMLTQDPKKRITAAQV 144
I S L ++ L ++P R++AA++
Sbjct: 311 REIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 8 HSK-GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
HSK V+HRD+KP N L + + +K DFG+S ++ + G Y+APE +
Sbjct: 126 HSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERIN 182
Query: 66 ----RRRYGKEADIWSAGVILYILLCGVPPF--WADTDEGIFEEIRKGEIDFQIDPWPVI 119
++ Y ++DIWS G+ + L P+ W + + + + + D +
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF--- 239
Query: 120 SSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
S+ + + L ++ K+R T ++++HP+
Sbjct: 240 SAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGL+ +E+ E R + +PE +
Sbjct: 167 GYVHRDLAARNILINS---NLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E+ G+ F + APE L R
Sbjct: 133 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEWTARQGAKFPIKWTAPEAALYGR 188
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 245
Query: 128 RRMLTQDPKKRIT 140
+ ++P++R T
Sbjct: 246 CQCWRKEPEERPT 258
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
++ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DGN
Sbjct: 1 MDQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFIT 256
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 259 MQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKD 317
M + E+ +AF +DKD D IT EL T + + +A ++++++EVD D +
Sbjct: 1 MDQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGN 60
Query: 318 GRISYDEFCAMMKR 331
G I + EF MM R
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 189 NLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGT 248
NL E+I + K+ F D D +G++S EL + LG + E +V M D+DGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 249 IDYIEFITATMQRH 262
I++ EF+ A M R
Sbjct: 63 IEFSEFL-ALMSRQ 75
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKDN+ I+ EL T + + +A + ++M+E+D D + +I +
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 324 EFCAMMKR 331
EF A+M R
Sbjct: 67 EFLALMSR 74
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 132 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLA 187
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 244
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D GT++ EL + LG E +++ + D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 247 GTIDYIEFITATMQRHK 263
GTID+ EF+T ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D DG I +
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 66
Query: 324 EFCAMMKR 331
EF MM R
Sbjct: 67 EFLTMMAR 74
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 45/183 (24%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y++PE L+ Y
Sbjct: 188 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYS 243
Query: 71 KEADIWSAGVILYILLCG---VPPFWADTDEGIFEEIRKGE------------------- 108
++DIWS G+ L + G +PP A E +F +G+
Sbjct: 244 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 303
Query: 109 ------------IDFQID-PWPVISSSA-----KELVRRMLTQDPKKRITAAQVLEHPWL 150
+D+ ++ P P + S+ ++ V + L ++P +R Q++ H ++
Sbjct: 304 MDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 363
Query: 151 KES 153
K S
Sbjct: 364 KRS 366
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 131 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLA 186
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 243
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 244 ELMRACWQWNPSDRPSFAEI 263
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++LK+ F D D++G +S EL+ + LG L + +V + ++ AD+DG+G I+Y EF+
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 256 TATMQR 261
M +
Sbjct: 64 KVMMAK 69
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E L +AF+ FDKD + +I+ EL N+G+ D + E++ E D D DG+I+Y+E
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMT--NLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 325 FCAMM 329
F +M
Sbjct: 62 FVKVM 66
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 11 GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR 66
G +HRDL N L S N V K DFGL +E+ E R + +PE +
Sbjct: 167 GYVHRDLAARNILINS---NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
R++ +D+WS G++L+ ++ G P+W +++ + + + +G
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL- 65
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 132 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 187
Query: 66 RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 244
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL- 65
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 143 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 198
Query: 66 RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 255
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 256 ELMRACWQWNPSDRPSFAEI 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 242
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 247
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 33/177 (18%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+V H GV+HRDL P N L ++ + DF L+ +Y APE+
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
Query: 65 LRRRYG--KEADIWSAGVILYILLCGVPPFWADT------------------DEGIFEE- 103
+ + G K D+WSAG ++ + F T D +F
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSP 264
Query: 104 -----IRKGEIDFQIDPW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
+R + W P A +L+ +ML +P++RI+ Q L HP+ +
Sbjct: 265 SARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 132 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 187
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 244
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 245 ELMRACWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 247
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 45/183 (24%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y++PE L+ Y
Sbjct: 153 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYS 208
Query: 71 KEADIWSAGVILYILLCG---VPPFWADTDEGIFEEIRKGE------------------- 108
++DIWS G+ L + G +PP A E +F +G+
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268
Query: 109 ------------IDFQID------PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
+D+ ++ P V S ++ V + L ++P +R Q++ H ++
Sbjct: 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328
Query: 151 KES 153
K S
Sbjct: 329 KRS 331
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLS------VFIEEGKEFRDVCGSAFYVAP 62
SK +HRDL N L T K+ VLK DFG+S V+ G R V + AP
Sbjct: 231 SKCCIHRDLAARNCLVTEKN---VLKISDFGMSREEADGVYAASGG-LRQV--PVKWTAP 284
Query: 63 EVLRR-RYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
E L RY E+D+WS G++L+ G P+ +++ E + KG
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG 331
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 242
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL- 65
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 66 RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 247
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 33/177 (18%)
Query: 5 NVCHSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEV 64
+V H GV+HRDL P N L ++ + DF L+ +Y APE+
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
Query: 65 LRRRYG--KEADIWSAGVILYILLCGVPPFWADT------------------DEGIFEE- 103
+ + G K D+WSAG ++ + F T D +F
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSP 264
Query: 104 -----IRKGEIDFQIDPW----PVISSSAKELVRRMLTQDPKKRITAAQVLEHPWLK 151
+R + W P A +L+ +ML +P++RI+ Q L HP+ +
Sbjct: 265 SARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 242
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 45/183 (24%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y++PE L+ Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYS 181
Query: 71 KEADIWSAGVILYILLCG---VPPFWADTDEGIFEEIRKGE------------------- 108
++DIWS G+ L + G +PP A E +F +G+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 109 ------------IDFQID------PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
+D+ ++ P V S ++ V + L ++P +R Q++ H ++
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
Query: 151 KES 153
K S
Sbjct: 302 KRS 304
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 45/183 (24%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y++PE L+ Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYS 181
Query: 71 KEADIWSAGVILYILLCG---VPPFWADTDEGIFEEIRKGE------------------- 108
++DIWS G+ L + G +PP A E +F +G+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 109 ------------IDFQID------PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
+D+ ++ P V S ++ V + L ++P +R Q++ H ++
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
Query: 151 KES 153
K S
Sbjct: 302 KRS 304
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL- 65
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 66 RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 242
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 45/183 (24%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y++PE L+ Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYS 181
Query: 71 KEADIWSAGVILYILLCG---VPPFWADTDEGIFEEIRKGE------------------- 108
++DIWS G+ L + G +PP A E +F +G+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 109 ------------IDFQID------PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
+D+ ++ P V S ++ V + L ++P +R Q++ H ++
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
Query: 151 KES 153
K S
Sbjct: 302 KRS 304
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL- 65
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 134 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 189
Query: 66 RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 246
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 247 ELMRACWQWNPSDRPSFAEI 266
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL- 65
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 66 RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 247
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 45/183 (24%)
Query: 12 VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVLR-RRYG 70
+MHRD+KP N L S+ E +K DFG+S + + G+ Y++PE L+ Y
Sbjct: 126 IMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYS 181
Query: 71 KEADIWSAGVILYILLCG---VPPFWADTDEGIFEEIRKGE------------------- 108
++DIWS G+ L + G +PP A E +F +G+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 109 ------------IDFQID------PWPVISSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
+D+ ++ P V S ++ V + L ++P +R Q++ H ++
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
Query: 151 KES 153
K S
Sbjct: 302 KRS 304
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 242
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV---APEVL 65
SK +HRDL N L ++ V+K DFGLS ++ + +E V GS F V PEVL
Sbjct: 138 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEETSSV-GSKFPVRWSPPEVL 193
Query: 66 R-RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ ++DIW+ GV+++ I G P+ T+ E I +G
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL- 65
K +HRDL N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 66 RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 242
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF----RDVCGSAFYVAPEVLR-R 67
+HRDL N L S N V K DFG+S +E+ E R + APE + R
Sbjct: 138 VHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 68 RYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ +D+WS G++++ ++ G P+W +++ + + I +G
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCGSAFYVAPEVLR-R 67
+HRDL N L S N V K DFG+S +E+ E R + APE + R
Sbjct: 153 VHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 68 RYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ +D+WS G++++ ++ G P+W +++ + + I +G
Sbjct: 210 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYV---APEVL 65
SK +HRDL N L ++ V+K DFGLS ++ + E+ GS F V PEVL
Sbjct: 118 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVL 173
Query: 66 R-RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ ++DIW+ GV+++ I G P+ T+ E I +G
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF----RDVCGSAFYVAPEVLR-R 67
+HRDL N L S N V K DFG+S +E+ E R + APE + R
Sbjct: 132 VHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 68 RYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ +D+WS G++++ ++ G P+W +++ + + I +G
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 17/99 (17%)
Query: 242 DIDGNGTIDYIEFIT--ATMQRHKLERFEHLDKAFQYFDKDNDRYITVDELETAFKE-YN 298
D D NG I + EFIT +T R LE E L AF+ +D ++D YIT DE+ T Y
Sbjct: 73 DKDNNGFIHFEEFITVLSTTSRGTLE--EKLSWAFELYDLNHDGYITFDEMLTIVASVYK 130
Query: 299 M--------GDDAT----IKEIMSEVDRDKDGRISYDEF 325
M D+AT +K+I +D+++DG I+ DEF
Sbjct: 131 MMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 202 FTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFITATMQR 261
FT D D +G + ++E L+ E + + D++ +G I + E +T
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 262 HK-------LERFE-----HLDKAFQYFDKDNDRYITVDEL 290
+K L E + K F+ DK+ D YIT+DE
Sbjct: 129 YKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 274 FQYFDKDNDRYITVDELETAFKEYNMGDDATIKEIMSEV----DRDKDGRISYDEFCAMM 329
F FDKDN+ +I +E T + G T++E +S D + DG I++DE ++
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRG---TLEEKLSWAFELYDLNHDGYITFDEMLTIV 125
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 18/147 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + EN V+K DFGL+ I + ++ D ++APE +
Sbjct: 217 SRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESI 273
Query: 65 LRRRYGKEADIWSAGVILYIL--LCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
+ Y ++D+WS GV+L+ + L G P DE +R+G + + + S
Sbjct: 274 FDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREG-MRMRAPEY-----S 327
Query: 123 AKELVRRML---TQDPKKRITAAQVLE 146
E+ + ML +DPK+R A+++E
Sbjct: 328 TPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 72/200 (36%), Gaps = 59/200 (29%)
Query: 8 HSKGVMHRDLKPENFLFTSKD----------------ENAVLKAIDFGLSVFIEEGKEFR 51
H + H DLKPEN LF + + +N ++ DFG + F E
Sbjct: 172 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHT 229
Query: 52 DVCGSAFYVAPEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTD------------- 97
+ + Y PEV L + + D+WS G IL+ G F +
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP 289
Query: 98 --EGIFEEIRKGEIDFQID-PWPVISSSAK------------------------ELVRRM 130
+ RK + ++ W SS + +L+RRM
Sbjct: 290 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRM 349
Query: 131 LTQDPKKRITAAQVLEHPWL 150
L DP +RIT A+ L HP+
Sbjct: 350 LEFDPAQRITLAEALLHPFF 369
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L ++ V+K DFGLS ++ + E+ GS F + PEVL
Sbjct: 122 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVL 177
Query: 66 R-RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ ++DIW+ GV+++ I G P+ T+ E I +G
Sbjct: 178 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L ++ V+K DFGLS ++ + E+ GS F + PEVL
Sbjct: 123 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVL 178
Query: 66 R-RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ ++DIW+ GV+++ I G P+ T+ E I +G
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 187 VENLPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGN 246
+ L E+I + K+ F+ D D G ++ EL + LG E +++ + D DGN
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 247 GTIDYIEFITATMQRHK 263
GTID+ EF+ ++ K
Sbjct: 61 GTIDFPEFLNLMARKMK 77
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYD 323
E+ +AF FDKD D IT EL T + +A ++++++EVD D +G I +
Sbjct: 7 EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 324 EFCAMMKR 331
EF +M R
Sbjct: 67 EFLNLMAR 74
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF----YVAPE- 63
S+ +HRDL N L EN ++K DFG+S + +R V G ++ PE
Sbjct: 146 SQHFVHRDLATRNCLV---GENLLVKIGDFGMSRDVYSTDYYR-VGGHTMLPIRWMPPES 201
Query: 64 VLRRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEI 109
++ R++ E+D+WS GV+L+ I G P++ ++ + E I +G +
Sbjct: 202 IMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 248
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 13 MHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPE-VLRRR 68
+HRDL+ N L EN V K DFGL+ IE+ E G+ F + APE L R
Sbjct: 126 VHRDLRAANILV---GENLVCKVADFGLARLIED-NEXTARQGAKFPIKWTAPEAALYGR 181
Query: 69 YGKEADIWSAGVILYILLC-GVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAKELV 127
+ ++D+WS G++L L G P+ + + +++ +G +++ P S +L+
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 238
Query: 128 RRMLTQDPKKRIT 140
+ ++P++R T
Sbjct: 239 CQCWRKEPEERPT 251
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 72/200 (36%), Gaps = 59/200 (29%)
Query: 8 HSKGVMHRDLKPENFLFTSKD----------------ENAVLKAIDFGLSVFIEEGKEFR 51
H + H DLKPEN LF + + +N ++ DFG + F E
Sbjct: 149 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHT 206
Query: 52 DVCGSAFYVAPEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTD------------- 97
+ + Y PEV L + + D+WS G IL+ G F +
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP 266
Query: 98 --EGIFEEIRKGEIDFQID-PWPVISSSAK------------------------ELVRRM 130
+ RK + ++ W SS + +L+RRM
Sbjct: 267 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRM 326
Query: 131 LTQDPKKRITAAQVLEHPWL 150
L DP +RIT A+ L HP+
Sbjct: 327 LEFDPAQRITLAEALLHPFF 346
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L ++ V+K DFGLS ++ + E+ GS F + PEVL
Sbjct: 138 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVL 193
Query: 66 R-RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ ++DIW+ GV+++ I G P+ T+ E I +G
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L ++ V+K DFGLS ++ + E+ GS F + PEVL
Sbjct: 129 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVL 184
Query: 66 R-RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ ++DIW+ GV+++ I G P+ T+ E I +G
Sbjct: 185 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 272 KAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYDEFCAMMK 330
+AF FDKD D ITV+EL T + + + +++++SEVD D +G I +DEF ++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 331 R 331
+
Sbjct: 74 K 74
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+I K+ F D D G ++ +EL + L E +++ + D DGNGTI
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 250 DYIEFITATMQR 261
++ EF++ ++
Sbjct: 64 EFDEFLSLMAKK 75
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 187 VENLPTEEIQKLKQKFTEMDT-DKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDG 245
V L + +++ L+ F + +T + SG +S D++ L LG + ++Q + D G
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 246 NGTIDYIEF--ITATMQRHKL---ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMG 300
NG ID+ F I A ++ + + L +AF+ +DK+ + YI+ D + E
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL--- 120
Query: 301 DDATIKE-----IMSEVDRDKDGRISYDEFCAMMKRGTQ 334
D T+ ++ E+D D G + ++EF +M G +
Sbjct: 121 -DETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGDE 158
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 72/200 (36%), Gaps = 59/200 (29%)
Query: 8 HSKGVMHRDLKPENFLFTSKD----------------ENAVLKAIDFGLSVFIEEGKEFR 51
H + H DLKPEN LF + + +N ++ DFG + F E
Sbjct: 140 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHT 197
Query: 52 DVCGSAFYVAPEV-LRRRYGKEADIWSAGVILYILLCGVPPFWADTD------------- 97
+ + Y PEV L + + D+WS G IL+ G F +
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP 257
Query: 98 --EGIFEEIRKGEIDFQID-PWPVISSSAK------------------------ELVRRM 130
+ RK + ++ W SS + +L+RRM
Sbjct: 258 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRM 317
Query: 131 LTQDPKKRITAAQVLEHPWL 150
L DP +RIT A+ L HP+
Sbjct: 318 LEFDPAQRITLAEALLHPFF 337
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G G+ F + APE L
Sbjct: 128 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 183
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVY 240
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HR+L N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 334 KNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 389
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 390 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 446
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 447 ELMRACWQWNPSDRPSFAEI 466
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 272 KAFQYFDKDNDRYITVDELETAFKEYNMG-DDATIKEIMSEVDRDKDGRISYDEFCAMMK 330
+AF FDKD D ITV+EL T + + + +++++SEVD D +G I +DEF ++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 331 R 331
+
Sbjct: 74 K 74
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+I K+ F D D G ++ +EL + L E +++ + D DGNGTI
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 250 DYIEFITATMQRHK 263
++ EF++ ++ K
Sbjct: 64 EFDEFLSLMAKKVK 77
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGS-----AFYVAPE 63
SK +HRDL N L T K+ VLK DFG+S EE G + APE
Sbjct: 231 SKCCIHRDLAARNCLVTEKN---VLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPE 285
Query: 64 VLRR-RYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
L RY E+D+WS G++L+ G P+ +++ E + KG
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG 331
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HR+L N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 337 KNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 392
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 449
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 450 ELMRACWQWNPSDRPSFAEI 469
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G G+ F + APE L
Sbjct: 128 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 183
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVY 240
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HR+L N L EN ++K DFGLS + G + G+ F + APE L
Sbjct: 376 KNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 431
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 432 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 488
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 489 ELMRACWQWNPSDRPSFAEI 508
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 267 FEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDATIKEI---MSEVDRDKDGRISYD 323
E L AF+ FD+D D +ITVDEL A +G +E+ + E D D+DGR++Y+
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMA--GLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 324 EFCAMMKR 331
EF M+ +
Sbjct: 63 EFARMLAQ 70
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 195 IQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEF 254
++ L+ F D D G ++ DEL+ +A LG L + ++ ++ AD+D +G ++Y EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 255 ITATMQ 260
Q
Sbjct: 65 ARMLAQ 70
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 242 DIDGNGTIDYIEFITATMQRHKLERFEHLDKAFQYFDKDNDRYITVDE-LETAFKEYNM- 299
D D NG ID+ EFI A + E + L AFQ +D DN+ I+ DE L Y M
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMV 132
Query: 300 -------GDDAT----IKEIMSEVDRDKDGRISYDEFCAMMKR 331
D+ T + +I + +D++KDG+++ +EFC KR
Sbjct: 133 GSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 202 FTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEF--ITATM 259
F E+D + G +SY+E+KA ++K + E ++ ++ D DGNG ID EF ++
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 260 QRHKLERFE-HLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDATIKEIMSEVDRDKDG 318
Q L + L ++ D D D +T +E+ + FK++ + + E + + D + DG
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDG 122
Query: 319 RISYDEFC 326
I+ +EF
Sbjct: 123 YITLEEFL 130
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 202 FTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEF--ITATM 259
F E+D + G +SY+E+KA ++K + E ++ ++ D DGNG ID EF ++
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 260 QRHKLERFE-HLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDATIKEIMSEVDRDKDG 318
Q L + L ++ D D D +T +E+ + FK++ + + E + + D + DG
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDG 122
Query: 319 RISYDEFC 326
I+ +EF
Sbjct: 123 YITLEEFL 130
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%)
Query: 190 LPTEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTI 249
L E+ Q++K+ F DT+K+G++ Y ELK + LG +++ ++ + M D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 250 DYIEFITATMQRHK 263
+ +F+ ++ K
Sbjct: 61 GFDDFLDIMTEKIK 74
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 265 ERFEHLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT---IKEIMSEVDRDKDGRIS 321
E+ + + +AF FD + I EL+ A + +G D I E+M+E DR+ +G I
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA--LGFDVKKPEILELMNEYDREGNGYIG 61
Query: 322 YDEFCAMMKRGTQRR 336
+D+F +M + R
Sbjct: 62 FDDFLDIMTEKIKNR 76
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
SK +HRDL N L ++ V+K DFGLS ++ + E+ GS F + PEVL
Sbjct: 123 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLD-DEYTSSRGSKFPVRWSPPEVL 178
Query: 66 R-RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
++ ++DIW+ GV+++ I G P+ T+ E I +G
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKE----FRDVCG---SAFYV 60
H+KG HRDLKP N L + + ++ + EG +D + Y
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 61 APEVLRRR----YGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKGEIDFQ---- 112
APE+ + + D+WS G +LY ++ G P+ + +F++ + Q
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY-----DMVFQKGDSVALAVQNQLS 265
Query: 113 IDPWPVISSSAKELVRRMLTQDPKKR 138
I P SS+ +L+ M+T DP +R
Sbjct: 266 IPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 5 NVCHSKG--VMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFY 59
N H++ ++HRDLK N L D+ +K DFGLS + F + G+ +
Sbjct: 151 NYLHNRNPPIVHRDLKSPNLLV---DKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEW 205
Query: 60 VAPEVLRRRYGKE-ADIWSAGVILYILLCGVPPFWADTDE-----GIFEEIRKGEIDFQI 113
+APEVLR E +D++S GVIL+ L P W + + + + ++ EI +
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQP-WGNLNPAQVVAAVGFKCKRLEIPRNL 264
Query: 114 DPWPVISSSAKELVRRMLTQDPKKRITAAQVLE 146
+P ++ T +P KR + A +++
Sbjct: 265 NP------QVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G G+ F + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 190
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 247
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL N L EN ++K DFGLS + G G+ F + APE L
Sbjct: 131 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 186
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
++ ++D+W+ GV+L+ I G+ P+ ++E + K D++++
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVY 243
Query: 125 ELVRRMLTQDPKKRITAAQV 144
EL+R +P R + A++
Sbjct: 244 ELMRACWQWNPSDRPSFAEI 263
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 8 HSK-GVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAFYVAPEVL- 65
HSK V+HRD+KP N L + + +K DFG+S ++ + G Y APE +
Sbjct: 153 HSKLSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERIN 209
Query: 66 ----RRRYGKEADIWSAGVILYILLCGVPPF--WADTDEGIFEEIRKGEIDFQIDPWPVI 119
++ Y ++DIWS G+ L P+ W + + + + + D +
Sbjct: 210 PELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF--- 266
Query: 120 SSSAKELVRRMLTQDPKKRITAAQVLEHPWL 150
S+ + + L ++ K+R T ++ +HP+
Sbjct: 267 SAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL- 65
K +HRDL N L EN V+K DFGLS + G + G+ F + APE L
Sbjct: 149 KNFIHRDLAARNCLV---GENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 204
Query: 66 RRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSAK 124
+ ++D+W+ GV+L+ I G+ P+ +++ + KG Q + P
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCP---PKVY 261
Query: 125 ELVRRMLTQDPKKRITAAQ 143
EL+R P R + A+
Sbjct: 262 ELMRACWKWSPADRPSFAE 280
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRISYDE 324
E L F+ FDK+ D YI +DEL+ + E DD I+E+M + D++ DGRI YDE
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDD--IEELMKDGDKNNDGRIDYDE 63
Query: 325 FCAMMK 330
F MK
Sbjct: 64 FLEFMK 69
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + DELK L G T+ E D+++ M+ D + +G IDY EF+
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 16/142 (11%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF--RDVCG--SAFYVAPEVL 65
K +HRDL N L EN V K DFGLS G+E + G ++A E L
Sbjct: 161 KQFIHRDLAARNILV---GENYVAKIADFGLS----RGQEVYVKKTMGRLPVRWMAIESL 213
Query: 66 RRR-YGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
Y +D+WS GV+L+ I+ G P+ T ++E++ +G ++++
Sbjct: 214 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEV 270
Query: 124 KELVRRMLTQDPKKRITAAQVL 145
+L+R+ + P +R + AQ+L
Sbjct: 271 YDLMRQCWREKPYERPSFAQIL 292
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 216 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 272
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 273 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 326
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 327 TPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 157 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 213
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 267
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 268 TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 157 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 213
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 267
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 268 TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVC----GSAFYVAPEV 64
+K +HRDL N L ++EN V K DFGL+ + + KEF V F+ APE
Sbjct: 132 TKRYIHRDLATRNILV--ENENRV-KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 65 L-RRRYGKEADIWSAGVILYILL 86
L ++ +D+WS GV+LY L
Sbjct: 189 LTESKFSVASDVWSFGVVLYELF 211
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 218 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 274
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 275 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 328
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 329 TPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 16/142 (11%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF--RDVCG--SAFYVAPEVL 65
K +HRDL N L EN V K DFGLS G+E + G ++A E L
Sbjct: 151 KQFIHRDLAARNILV---GENYVAKIADFGLS----RGQEVYVKKTMGRLPVRWMAIESL 203
Query: 66 RRR-YGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
Y +D+WS GV+L+ I+ G P+ T ++E++ +G ++++
Sbjct: 204 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEV 260
Query: 124 KELVRRMLTQDPKKRITAAQVL 145
+L+R+ + P +R + AQ+L
Sbjct: 261 YDLMRQCWREKPYERPSFAQIL 282
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 166 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 222
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 276
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 277 TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 168 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 224
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 225 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 278
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 279 TPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E + +AF+ FDKD + YI+ EL N+G+ D + E++ E D D DG+++Y+E
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 59
Query: 325 FCAMM 329
F MM
Sbjct: 60 FVQMM 64
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
+++++ F D D +G +S EL+ + LG L + +V + ++ ADIDG+G ++Y EF+
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 203 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 259
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 260 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 313
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 314 TPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF----YVAPE- 63
S+ +HRDL N L + N ++K DFG+S + +R V G ++ PE
Sbjct: 151 SQHFVHRDLATRNCLVGA---NLLVKIGDFGMSRDVYSTDYYR-VGGHTMLPIRWMPPES 206
Query: 64 VLRRRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEI 109
++ R++ E+D+WS GVIL+ I G P++ ++ + E I +G +
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 253
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 211 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 267
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 268 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 321
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 322 TPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 209 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 265
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 266 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 319
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 320 TPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E + +AF+ FDKD + YI+ EL N+G+ D + E++ E D D DG+++Y+E
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 325 FCAMM 329
F MM
Sbjct: 63 FVQMM 67
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +++++ F D D +G +S EL+ + LG L + +V + ++ ADIDG+G ++Y
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 252 IEFI 255
EF+
Sbjct: 61 EEFV 64
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 162 SRKXIHRDLAARNILLSEKN---VVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 218
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 219 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPD------YT 272
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 273 TPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E + +AF+ FDKD + YI+ EL N+G+ D + E++ E D D DG+++Y+E
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 325 FCAMM 329
F MM
Sbjct: 63 FVQMM 67
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +++++ F D D +G +S EL+ + LG L + +V + ++ ADIDG+G ++Y
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 252 IEFI 255
EF+
Sbjct: 61 EEFV 64
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + ++ D ++APE +
Sbjct: 162 SRKXIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 218
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 219 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 272
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 273 TPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF----YVAPE- 63
SK +HRDL N L T + K DFGL+ I+ + V G+A ++APE
Sbjct: 186 SKNCIHRDLAARNILLT---HGRITKICDFGLARHIKNDSNYV-VKGNARLPVKWMAPES 241
Query: 64 VLRRRYGKEADIWSAGVILYILLC-GVPPFWA-DTDEGIFEEIRKGEIDFQIDPWPVISS 121
+ Y E+D+WS G+ L+ L G P+ D ++ I++G F++ +
Sbjct: 242 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG---FRMLSPEHAPA 298
Query: 122 SAKELVRRMLTQDPKKRITAAQVLE 146
++++ DP KR T Q+++
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVLR 66
K +HRDL+ N L + E+ + K DFGL+ IE+ E+ G+ F + APE +
Sbjct: 129 KNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAIN 184
Query: 67 -RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKG 107
+ ++D+WS G++LY I+ G P+ T+ + + +G
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 79/228 (34%), Gaps = 86/228 (37%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDV-------------- 53
H G++HRDLKP N L +++ +K DFGL+ I K+ V
Sbjct: 148 HESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 54 ------------CGSAFYVAPE--VLRRRYGKEADIWSAGVIL----------------- 82
+ +Y APE +L+ Y DIWS G I
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNR 264
Query: 83 YILLCGVPPFWADTDEG---------------IF-------EE----IRKGEIDFQIDPW 116
+ L G F D IF EE I K E+ I +
Sbjct: 265 FPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLF 324
Query: 117 PV------------ISSSAKELVRRMLTQDPKKRITAAQVLEHPWLKE 152
P IS +L+ ML + +KRIT + L HP+LK+
Sbjct: 325 PTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E + +AF+ FDKD + YI+ EL N+G+ D + E++ E D D DG+++Y+E
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 325 FCAMM 329
F MM
Sbjct: 67 FVQMM 71
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +++++ F D D +G +S EL+ + LG L + +V + ++ ADIDG+G ++Y
Sbjct: 5 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 64
Query: 252 IEFI 255
EF+
Sbjct: 65 EEFV 68
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E + +AF+ FDKD + YI+ EL N+G+ D + E++ E D D DG+++Y+E
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 325 FCAMM 329
F MM
Sbjct: 64 FVQMM 68
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +++++ F D D +G +S EL+ + LG L + +V + ++ ADIDG+G ++Y
Sbjct: 2 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 61
Query: 252 IEFI 255
EF+
Sbjct: 62 EEFV 65
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFKEYNMGD---DATIKEIMSEVDRDKDGRISYDE 324
E + +AF+ FDKD + YI+ EL N+G+ D + E++ E D D DG+++Y+E
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 325 FCAMM 329
F MM
Sbjct: 66 FVQMM 70
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 192 TEEIQKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDY 251
T+ +++++ F D D +G +S EL+ + LG L + +V + ++ ADIDG+G ++Y
Sbjct: 4 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 63
Query: 252 IEFI 255
EF+
Sbjct: 64 EEFV 67
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 232 VDVKQYMQAADIDGNGTIDYIEFITATMQRHK-LERFEHLDKAFQYFDKDNDRYITVDEL 290
+++ + D DGNGTID+ EF+T ++ K + E + +AF+ FDKD + YI+ EL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 197 KLKQKFTEMDTDKSGTLSYDELKAGLA-KLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
+L+ E+D D +GT+ + E +A K+ T E ++++ + D DGNG +I
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG------YI 55
Query: 256 TATMQRH 262
+A RH
Sbjct: 56 SAAELRH 62
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 20/116 (17%)
Query: 8 HSKGVMHRDLKPENFLFTSKDENAVLKAIDFGL---SVFIEEGK---EFRDVCGSAFYVA 61
H+KG++H+DLK +N + +N + DFGL S ++ G+ + R G ++A
Sbjct: 147 HAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA 202
Query: 62 PEVLRR----------RYGKEADIWSAGVILYILLCGVPPFWADTDEGIFEEIRKG 107
PE++R+ + K +D+++ G I Y L PF E I ++ G
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG 258
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++LK+ F +D +K G + D L+ L LG L E +++ + D DG+GT+DY EF
Sbjct: 7 RELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFK 66
Query: 256 TATMQ 260
M
Sbjct: 67 CLMMS 71
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 269 HLDKAFQYFDKDNDRYITVDELETAFKEYNMGDDAT---IKEIMSEVDRDKDGRISYDEF 325
L +AF+ DK+ I VD L K ++GD+ T I+ +++E D D G + Y+EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILK--SLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 326 -CAMM 329
C MM
Sbjct: 66 KCLMM 70
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + + D ++APE +
Sbjct: 166 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETI 222
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 276
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 277 TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + + D ++APE +
Sbjct: 166 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETI 222
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 276
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 277 TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF---RDVCGSAFYVAPE-V 64
S+ +HRDL N L + K+ V+K DFGL+ I + + D ++APE +
Sbjct: 157 SRKCIHRDLAARNILLSEKN---VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETI 213
Query: 65 LRRRYGKEADIWSAGVILY-ILLCGVPPF-WADTDEGIFEEIRKGEIDFQIDPWPVISSS 122
R Y ++D+WS GV+L+ I G P+ DE +++G D +
Sbjct: 214 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD------YT 267
Query: 123 AKELVRRML---TQDPKKRITAAQVLEH 147
E+ + ML +P +R T ++++EH
Sbjct: 268 TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 268 EHLDKAFQYFDKDNDRYITVDELETAFK---EYNMGDDATIKEIMSEVDRDKDGRISYDE 324
E L F+ FDK+ D YI ++EL+ + E DD I+E+M + D++ DGRI YDE
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD--IEELMKDGDKNNDGRIDYDE 64
Query: 325 FCAMMK 330
F MK
Sbjct: 65 FLEFMK 70
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 196 QKLKQKFTEMDTDKSGTLSYDELKAGLAKLGSTLREVDVKQYMQAADIDGNGTIDYIEFI 255
++L F D + G + +ELK L G T+ E D+++ M+ D + +G IDY EF+
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 9 SKGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEFRDVCGSAF---YVAPEVL 65
S+ +HRDL N + E+ + DFGLS I G +R C S ++A E L
Sbjct: 155 SRNFIHRDLAARNCMLA---EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL 211
Query: 66 R-RRYGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
Y +D+W+ GV ++ I+ G P+ + I+ + G ++ P
Sbjct: 212 ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN---RLKQPPECMEEV 268
Query: 124 KELVRRMLTQDPKKR 138
+L+ + + DPK+R
Sbjct: 269 YDLMYQCWSADPKQR 283
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 16/142 (11%)
Query: 10 KGVMHRDLKPENFLFTSKDENAVLKAIDFGLSVFIEEGKEF--RDVCG--SAFYVAPEVL 65
K +HR+L N L EN V K DFGLS G+E + G ++A E L
Sbjct: 158 KQFIHRNLAARNILV---GENYVAKIADFGLS----RGQEVYVKKTMGRLPVRWMAIESL 210
Query: 66 RRR-YGKEADIWSAGVILY-ILLCGVPPFWADTDEGIFEEIRKGEIDFQIDPWPVISSSA 123
Y +D+WS GV+L+ I+ G P+ T ++E++ +G ++++
Sbjct: 211 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEV 267
Query: 124 KELVRRMLTQDPKKRITAAQVL 145
+L+R+ + P +R + AQ+L
Sbjct: 268 YDLMRQCWREKPYERPSFAQIL 289
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,088,160
Number of Sequences: 62578
Number of extensions: 426148
Number of successful extensions: 4879
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 417
Number of HSP's that attempted gapping in prelim test: 1602
Number of HSP's gapped (non-prelim): 1913
length of query: 353
length of database: 14,973,337
effective HSP length: 100
effective length of query: 253
effective length of database: 8,715,537
effective search space: 2205030861
effective search space used: 2205030861
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)