Query 018608
Match_columns 353
No_of_seqs 154 out of 911
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 03:16:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018608.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018608hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.4 3E-13 1E-17 99.2 8.1 63 6-70 5-67 (68)
2 1cc8_A Protein (metallochapero 99.4 1.8E-12 6.1E-17 95.3 10.0 67 3-70 5-72 (73)
3 4a4j_A Pacszia, cation-transpo 99.4 4.1E-12 1.4E-16 91.7 9.9 65 4-68 3-69 (69)
4 3fry_A Probable copper-exporti 99.3 1E-11 3.5E-16 91.9 7.9 68 1-70 3-70 (73)
5 2crl_A Copper chaperone for su 99.3 1.4E-11 4.8E-16 97.8 9.1 68 5-73 21-88 (98)
6 3dxs_X Copper-transporting ATP 99.3 2.4E-11 8.2E-16 89.0 9.5 67 4-70 3-72 (74)
7 2xmm_A SSR2857 protein, ATX1; 99.2 2E-11 6.8E-16 84.7 5.9 60 7-66 5-64 (64)
8 2xmw_A PACS-N, cation-transpor 99.2 1.4E-10 4.6E-15 82.0 10.1 68 1-68 1-70 (71)
9 2roe_A Heavy metal binding pro 99.2 6.7E-11 2.3E-15 84.2 6.9 62 7-68 4-65 (66)
10 1aw0_A Menkes copper-transport 99.1 6E-10 2.1E-14 79.0 9.2 64 5-68 5-71 (72)
11 3cjk_B Copper-transporting ATP 99.1 9.5E-10 3.3E-14 79.3 10.3 67 3-69 2-71 (75)
12 2l3m_A Copper-ION-binding prot 99.1 7.9E-10 2.7E-14 78.4 9.5 63 4-66 6-71 (71)
13 1fvq_A Copper-transporting ATP 99.1 4.8E-10 1.6E-14 79.6 8.1 66 5-70 4-71 (72)
14 1cpz_A Protein (COPZ); copper 99.1 7E-10 2.4E-14 77.6 8.5 62 7-68 4-68 (68)
15 1osd_A MERP, hypothetical prot 99.1 1.1E-09 3.8E-14 77.6 9.6 65 4-68 4-71 (72)
16 1q8l_A Copper-transporting ATP 99.0 7.9E-10 2.7E-14 82.9 8.6 67 4-70 10-79 (84)
17 2kt2_A Mercuric reductase; nme 99.0 9.8E-10 3.3E-14 77.8 7.8 62 7-68 4-67 (69)
18 2qif_A Copper chaperone COPZ; 99.0 2.1E-09 7.1E-14 74.2 9.2 61 5-65 4-67 (69)
19 2k2p_A Uncharacterized protein 99.0 3.9E-10 1.3E-14 87.2 6.0 61 5-65 24-84 (85)
20 2g9o_A Copper-transporting ATP 99.0 1.5E-09 5.1E-14 83.6 9.2 67 5-71 5-77 (90)
21 1opz_A Potential copper-transp 99.0 1.7E-09 5.9E-14 76.9 8.7 65 4-68 7-74 (76)
22 1mwy_A ZNTA; open-faced beta-s 99.0 3.2E-09 1.1E-13 76.6 10.2 64 5-68 5-69 (73)
23 1yg0_A COP associated protein; 99.0 1.8E-09 6.3E-14 75.0 8.5 60 6-65 4-65 (66)
24 1qup_A Superoxide dismutase 1 99.0 1.1E-09 3.6E-14 100.3 9.3 66 3-71 8-73 (222)
25 2kyz_A Heavy metal binding pro 99.0 3.6E-10 1.2E-14 80.8 4.9 64 1-68 1-64 (67)
26 1yjr_A Copper-transporting ATP 99.0 2.6E-09 8.8E-14 76.3 9.0 65 5-69 6-73 (75)
27 1kvi_A Copper-transporting ATP 99.0 1.5E-09 5.2E-14 79.2 7.8 67 4-70 9-78 (79)
28 1y3j_A Copper-transporting ATP 98.9 2E-09 7E-14 78.3 7.3 66 5-70 5-73 (77)
29 2ldi_A Zinc-transporting ATPas 98.9 2.9E-09 1E-13 74.3 7.6 62 5-66 5-69 (71)
30 1jww_A Potential copper-transp 98.9 5.1E-09 1.7E-13 75.8 8.3 68 4-71 4-74 (80)
31 2ew9_A Copper-transporting ATP 98.9 5.1E-09 1.8E-13 84.7 8.7 64 5-68 82-148 (149)
32 1p6t_A Potential copper-transp 98.9 6E-09 2E-13 85.0 8.6 67 5-71 76-145 (151)
33 1jk9_B CCS, copper chaperone f 98.9 3.4E-09 1.2E-13 98.8 7.9 64 4-70 10-73 (249)
34 2aj0_A Probable cadmium-transp 98.9 2E-09 6.8E-14 77.5 4.9 63 1-67 1-63 (71)
35 2kkh_A Putative heavy metal tr 98.8 1.1E-08 3.9E-13 78.6 8.9 68 4-71 17-87 (95)
36 2ofg_X Zinc-transporting ATPas 98.8 2.1E-08 7.3E-13 80.4 9.4 64 4-67 9-75 (111)
37 2rop_A Copper-transporting ATP 98.7 3.2E-08 1.1E-12 85.9 9.4 67 4-70 123-192 (202)
38 2ew9_A Copper-transporting ATP 98.7 9.6E-08 3.3E-12 77.2 9.1 67 3-69 4-73 (149)
39 1p6t_A Potential copper-transp 98.4 1.5E-06 5E-11 70.7 8.8 62 4-65 7-71 (151)
40 2rop_A Copper-transporting ATP 98.3 9.1E-07 3.1E-11 76.8 7.6 65 4-68 21-91 (202)
41 3j09_A COPA, copper-exporting 98.0 1.1E-05 3.6E-10 84.5 9.0 61 6-66 5-68 (723)
42 3bpd_A Uncharacterized protein 88.0 0.45 1.5E-05 39.4 3.9 47 19-65 22-76 (100)
43 2x3d_A SSO6206; unknown functi 87.1 0.72 2.5E-05 38.0 4.7 47 19-65 21-75 (96)
44 2raq_A Conserved protein MTH88 85.6 0.66 2.3E-05 38.2 3.7 47 19-65 22-76 (97)
45 3cq1_A Putative uncharacterize 74.3 3.6 0.00012 32.6 4.4 38 3-40 43-83 (103)
46 1uwd_A Hypothetical protein TM 71.3 4.6 0.00016 31.9 4.4 39 3-41 44-85 (103)
47 2jsx_A Protein NAPD; TAT, proo 67.3 39 0.0013 26.9 9.1 57 4-62 7-64 (95)
48 1aba_A Glutaredoxin; electron 64.1 11 0.00037 27.9 5.0 57 1-64 1-58 (87)
49 3lno_A Putative uncharacterize 61.9 5.7 0.00019 31.9 3.2 39 3-41 46-88 (108)
50 2cpq_A FragIle X mental retard 48.0 53 0.0018 26.2 6.7 43 20-64 36-78 (91)
51 2qn6_B Translation initiation 47.4 28 0.00095 27.9 5.0 56 4-60 7-72 (93)
52 3lvj_C Sulfurtransferase TUSA; 37.5 52 0.0018 25.0 5.0 57 4-68 10-67 (82)
53 3l78_A Regulatory protein SPX; 37.0 33 0.0011 27.6 4.0 53 1-65 1-53 (120)
54 1yz7_A Probable translation in 32.6 1.2E+02 0.0042 27.0 7.3 64 5-70 93-176 (188)
55 2nyt_A Probable C->U-editing e 31.1 80 0.0027 28.1 5.8 58 10-70 90-147 (190)
56 2fwh_A Thiol:disulfide interch 30.8 75 0.0026 24.7 5.1 33 7-39 36-74 (134)
57 1jdq_A TM006 protein, hypothet 30.1 78 0.0027 25.1 5.1 57 5-68 27-83 (98)
58 3fz4_A Putative arsenate reduc 29.6 40 0.0014 27.3 3.3 44 13-64 12-55 (120)
59 2hiy_A Hypothetical protein; C 29.0 75 0.0026 27.9 5.2 47 19-66 25-76 (183)
60 1dtj_A RNA-binding neurooncolo 28.1 65 0.0022 23.5 4.0 54 1-58 1-66 (76)
61 2k1h_A Uncharacterized protein 27.4 71 0.0024 25.6 4.4 39 20-60 40-80 (94)
62 1je3_A EC005, hypothetical 8.6 26.6 86 0.0029 24.9 4.7 59 3-68 26-84 (97)
63 1z3e_A Regulatory protein SPX; 26.0 34 0.0011 27.8 2.3 52 1-64 2-53 (132)
64 1zzo_A RV1677; thioredoxin fol 24.9 1.4E+02 0.0047 22.0 5.4 33 7-39 30-65 (136)
65 2wci_A Glutaredoxin-4; redox-a 24.3 1E+02 0.0035 25.4 5.0 25 13-39 49-73 (135)
66 2kgs_A Uncharacterized protein 24.2 17 0.0006 30.2 0.2 34 23-59 71-104 (132)
67 3oiz_A Antisigma-factor antago 23.4 78 0.0027 24.2 3.9 63 7-71 20-85 (99)
68 3hz7_A Uncharacterized protein 22.7 86 0.0029 24.2 3.9 55 6-68 3-59 (87)
69 2qip_A Protein of unknown func 21.7 40 0.0014 28.4 2.0 31 40-70 110-141 (165)
70 2p0g_A Selenoprotein W-related 21.3 2.5E+02 0.0085 22.9 6.6 57 4-60 4-78 (105)
71 1kaf_A Transcription regulator 20.6 1.4E+02 0.0047 25.0 4.9 42 27-69 42-83 (108)
72 2wem_A Glutaredoxin-related pr 20.3 1.5E+02 0.0052 23.7 5.2 40 13-64 34-75 (118)
73 1ttz_A Conserved hypothetical 20.2 1.1E+02 0.0036 23.2 4.0 16 12-28 9-24 (87)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.44 E-value=3e-13 Score=99.19 Aligned_cols=63 Identities=22% Similarity=0.263 Sum_probs=59.4
Q ss_pred EEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608 6 SLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 6 ~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
.+.+ .|+|.+|+.+|+++|.+++|| +++||+..++++|++.++++.|+++|+++||.+++|+.
T Consensus 5 ~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 5 EFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp EEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred EEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 4455 899999999999999999999 99999999999999999999999999999999999975
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.40 E-value=1.8e-12 Score=95.34 Aligned_cols=67 Identities=13% Similarity=0.102 Sum_probs=60.7
Q ss_pred EEEEEeeecCCchhHHHHHHHhHcCCC-CeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608 3 YTLSLVLYSFSSKLKASIFLNWVLFIF-GVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 3 ~vl~V~L~CmsC~~CA~kVkKaLskIe-GVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
..+.+.+. |+|.+|+.+|+++|.+++ ||.+++||+..++++|++.++.+.|+++|+++||.+++|..
T Consensus 5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (73)
T 1cc8_A 5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQ 72 (73)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEEE
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeeec
Confidence 34445556 999999999999999999 99999999999999999999999999999999999998753
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.36 E-value=4.1e-12 Score=91.72 Aligned_cols=65 Identities=23% Similarity=0.334 Sum_probs=60.7
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE--ecCCHHHHHHHHHHcCCceEEC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK--GDVAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt--G~VDp~~LlkaIkKtGK~AeL~ 68 (353)
.+.+.+..|+|.+|+.+|+++|.+++||.+++||+..++++|+ +.++.+.|+++|+++||.++++
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 3 TINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 4567789999999999999999999999999999999999998 7899999999999999999874
No 4
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.27 E-value=1e-11 Score=91.94 Aligned_cols=68 Identities=19% Similarity=0.165 Sum_probs=62.9
Q ss_pred CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608 1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
|...+.+.+..|+|.+|+.+|+++|.+ +||..++||+..++++|+.+ +.+.|+++|+++||.+++++.
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 345677888999999999999999999 99999999999999999999 999999999999999998874
No 5
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.4e-11 Score=97.83 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=61.8
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCCCCc
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPESKA 73 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~~p~ 73 (353)
+.+.+. |+|.+|+.+|+++|.+|+||.+|+||+..++|+|+..++.+.|+++|+++||.+++|.....
T Consensus 21 ~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 21 LEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSG 88 (98)
T ss_dssp EEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred EEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCC
Confidence 344456 99999999999999999999999999999999999999999999999999999999887543
No 6
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.27 E-value=2.4e-11 Score=89.02 Aligned_cols=67 Identities=18% Similarity=0.214 Sum_probs=61.2
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
.+.+.+..|+|.+|+.+|+++|.+++||.++.||+..++++|+. .++.+.|+++|+++||.++++..
T Consensus 3 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 3 KIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 45677899999999999999999999999999999999999975 37999999999999999998753
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.20 E-value=2e-11 Score=84.67 Aligned_cols=60 Identities=20% Similarity=0.186 Sum_probs=55.5
Q ss_pred EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceE
Q 018608 7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAE 66 (353)
Q Consensus 7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~Ae 66 (353)
+.+..|+|.+|+.+|+++|.+++||.++.+|+..++++|++.++.+.|+++|+++||.++
T Consensus 5 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~~ 64 (64)
T 2xmm_A 5 LTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEVE 64 (64)
T ss_dssp EECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCCC
T ss_pred EEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCCC
Confidence 345789999999999999999999999999999999999998999999999999999753
No 8
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.20 E-value=1.4e-10 Score=81.96 Aligned_cols=68 Identities=22% Similarity=0.256 Sum_probs=59.9
Q ss_pred CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec--CCHHHHHHHHHHcCCceEEC
Q 018608 1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD--VAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~--VDp~~LlkaIkKtGK~AeL~ 68 (353)
|...+.+.+..|+|.+|+..|+++|.+++||.++++|+..++++|+.+ ++.+.|+++|+++||.+.++
T Consensus 1 m~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp -CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred CCcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 666777888999999999999999999999999999999999999753 67889999999999988753
No 9
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.15 E-value=6.7e-11 Score=84.15 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=57.5
Q ss_pred EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEEC
Q 018608 7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~ 68 (353)
+.+..|+|.+|+.+|+++|.+++||.++++|+..++++|.+.++.+.|+++|+++||.+..+
T Consensus 4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 4 LKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp EEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 44578999999999999999999999999999999999988889999999999999998765
No 10
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.08 E-value=6e-10 Score=79.03 Aligned_cols=64 Identities=20% Similarity=0.172 Sum_probs=57.8
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEEC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~ 68 (353)
+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+ ++.+.|+++|+++||.+.+.
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 45567889999999999999999999999999999999999864 68899999999999998764
No 11
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.08 E-value=9.5e-10 Score=79.27 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=60.0
Q ss_pred EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECC
Q 018608 3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWP 69 (353)
Q Consensus 3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~ 69 (353)
+.+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+ ++.+.|+++|+++||.+.++.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 4556777899999999999999999999999999999999999753 678999999999999988754
No 12
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.08 E-value=7.9e-10 Score=78.45 Aligned_cols=63 Identities=21% Similarity=0.201 Sum_probs=56.3
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceE
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAE 66 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~Ae 66 (353)
.+.+.+..|+|.+|+..|+++|.+++||..+.+|+..++++|.. .++.+.|+++|+++||.++
T Consensus 6 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 71 (71)
T 2l3m_A 6 QLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDVQ 71 (71)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEEC
T ss_pred EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 45566789999999999999999999999999999999999974 4688999999999999763
No 13
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.07 E-value=4.8e-10 Score=79.56 Aligned_cols=66 Identities=17% Similarity=0.203 Sum_probs=58.6
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe--cCCHHHHHHHHHHcCCceEECCC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG--DVAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG--~VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|+. .++.+.|+++|+++||.+.+|..
T Consensus 4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~~ 71 (72)
T 1fvq_A 4 VILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILRD 71 (72)
T ss_dssp EEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEccC
Confidence 3445678999999999999999999999999999999999985 46789999999999999988753
No 14
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.06 E-value=7e-10 Score=77.63 Aligned_cols=62 Identities=27% Similarity=0.261 Sum_probs=56.1
Q ss_pred EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEEC
Q 018608 7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~ 68 (353)
+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+ ++.+.|+++|+++||.++++
T Consensus 4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 68 (68)
T 1cpz_A 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI 68 (68)
T ss_dssp EEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred EEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcccC
Confidence 456789999999999999999999999999999999999864 68899999999999998864
No 15
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.06 E-value=1.1e-09 Score=77.62 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=57.9
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEEC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~ 68 (353)
.+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+ ++.+.|+++|+++||.+.+.
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 345667889999999999999999999999999999999999753 68899999999999998764
No 16
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.04 E-value=7.9e-10 Score=82.91 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=60.2
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECCC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
.+.+.+..|+|.+|+..|+++|.+++||.+++||+..++++|+.+ ++...|+++|+++||.+.++..
T Consensus 10 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 10 VLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp EEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence 455667889999999999999999999999999999999999863 6889999999999999988775
No 17
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.01 E-value=9.8e-10 Score=77.78 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=56.0
Q ss_pred EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec--CCHHHHHHHHHHcCCceEEC
Q 018608 7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD--VAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~--VDp~~LlkaIkKtGK~AeL~ 68 (353)
+.+..|+|.+|+.+|+++|.+++||.++.||+..++++|..+ ++.+.|+++|+++||.+.+.
T Consensus 4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 4 LKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp EEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 456899999999999999999999999999999999999753 68899999999999998764
No 18
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.01 E-value=2.1e-09 Score=74.18 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=55.0
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCce
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHA 65 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~A 65 (353)
+.+.+..|+|.+|+..|.++|.+++||.++.+|+..++++|.. .++.+.|+++|+++||.+
T Consensus 4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 3456789999999999999999999999999999999999974 468899999999999975
No 19
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.01 E-value=3.9e-10 Score=87.17 Aligned_cols=61 Identities=16% Similarity=0.092 Sum_probs=56.7
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCce
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHA 65 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~A 65 (353)
+.+.+..|+|..|+.+|+++|.+++||.+++||+..++++|+..++.+.|+++|+++||.+
T Consensus 24 ~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 24 LSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred EEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 3455678999999999999999999999999999999999999999999999999999975
No 20
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.00 E-value=1.5e-09 Score=83.57 Aligned_cols=67 Identities=15% Similarity=0.081 Sum_probs=60.1
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHc---CCceEECCCC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKN---GKHAELWPES 71 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKt---GK~AeL~~~~ 71 (353)
+.+.+..|+|..|+.+|+++|.+++||.++.||+..++++|+. .++.+.|+++|+++ ||.+.++...
T Consensus 5 ~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 5 ATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV 77 (90)
T ss_dssp EEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred EEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence 4556689999999999999999999999999999999999975 46888999999999 5999988874
No 21
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.00 E-value=1.7e-09 Score=76.93 Aligned_cols=65 Identities=17% Similarity=0.177 Sum_probs=58.1
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEEC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~ 68 (353)
.+.+.+..|+|.+|+..|.++|.+++||.++.+|+..++++|.- .++.+.|+++|+++||.+.+|
T Consensus 7 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp EEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 34566788999999999999999999999999999999999974 468899999999999998876
No 22
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.00 E-value=3.2e-09 Score=76.56 Aligned_cols=64 Identities=20% Similarity=0.119 Sum_probs=56.2
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecC-CHHHHHHHHHHcCCceEEC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDV-AAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~V-Dp~~LlkaIkKtGK~AeL~ 68 (353)
+.+.+..|+|.+|+..|+++|.+++||.++.||+..++++|+.+. ..+.|+++|+++||.+...
T Consensus 5 ~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 5 YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp EEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 456678999999999999999999999999999999999998653 3678999999999998753
No 23
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.99 E-value=1.8e-09 Score=75.04 Aligned_cols=60 Identities=18% Similarity=0.191 Sum_probs=53.6
Q ss_pred EEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec--CCHHHHHHHHHHcCCce
Q 018608 6 SLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD--VAAETLIGKLEKNGKHA 65 (353)
Q Consensus 6 ~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~--VDp~~LlkaIkKtGK~A 65 (353)
.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+ ++.+.|+++|+++||.+
T Consensus 4 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 4 TFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 3446789999999999999999999999999999999999754 57889999999999975
No 24
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.99 E-value=1.1e-09 Score=100.32 Aligned_cols=66 Identities=20% Similarity=0.225 Sum_probs=60.4
Q ss_pred EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCCC
Q 018608 3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPES 71 (353)
Q Consensus 3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~~ 71 (353)
++|+| . |+|.+|+.+|+++|++++||.+++||+..++++|++.++.+.|+++|+++||.++++...
T Consensus 8 ~~l~V--~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~ 73 (222)
T 1qup_A 8 ATYAI--P-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG 73 (222)
T ss_dssp EEEEC--C-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCS
T ss_pred EEEEE--c-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCC
Confidence 34555 4 889999999999999999999999999999999999999999999999999999998764
No 25
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.99 E-value=3.6e-10 Score=80.79 Aligned_cols=64 Identities=22% Similarity=0.249 Sum_probs=55.8
Q ss_pred CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEEC
Q 018608 1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~ 68 (353)
|-++|. +..|+|.+|+.+|+++|.++ ||.++++|+..++++|..+.+ +.|+++|+++||.+.++
T Consensus 1 m~~~~~--v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 1 MRYVLY--VPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp CEEEEE--CGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred CeEEEE--ECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence 444444 56899999999999999999 999999999999999988766 88999999999987643
No 26
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.98 E-value=2.6e-09 Score=76.28 Aligned_cols=65 Identities=18% Similarity=0.190 Sum_probs=57.4
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWP 69 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~ 69 (353)
+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|..+ ++...|+++|+++||.+.+..
T Consensus 6 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (75)
T 1yjr_A 6 LELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLVK 73 (75)
T ss_dssp EEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEESS
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceeec
Confidence 44567899999999999999999999999999999999999864 567889999999999987654
No 27
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.97 E-value=1.5e-09 Score=79.15 Aligned_cols=67 Identities=13% Similarity=0.144 Sum_probs=59.3
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECCC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
.+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|+.+ ++.+.|+++|+++||.+.+...
T Consensus 9 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 78 (79)
T 1kvi_A 9 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP 78 (79)
T ss_dssp EEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECCC
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecCC
Confidence 455667889999999999999999999999999999999999753 6789999999999999987653
No 28
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.94 E-value=2e-09 Score=78.32 Aligned_cols=66 Identities=11% Similarity=0.056 Sum_probs=59.1
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECCC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|+.. ++...|+++|+++||.+.++..
T Consensus 5 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 73 (77)
T 1y3j_A 5 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIEN 73 (77)
T ss_dssp EEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEESC
T ss_pred EEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECCc
Confidence 45677899999999999999999999999999999999999753 6788999999999999987653
No 29
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.93 E-value=2.9e-09 Score=74.29 Aligned_cols=62 Identities=13% Similarity=0.077 Sum_probs=55.3
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceE
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAE 66 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~Ae 66 (353)
+.+.+..|+|.+|+..|+++|.+++||.++.+|+..++++|.. .++.+.|+++|+++||.++
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 5 QQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 4456679999999999999999999999999999999999974 4678899999999999875
No 30
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.90 E-value=5.1e-09 Score=75.83 Aligned_cols=68 Identities=16% Similarity=0.133 Sum_probs=60.5
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCCC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPES 71 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~~ 71 (353)
.+.+.+..|+|.+|+..|.++|.+++||.++.+|+..++++|.- .++...|+++|+++||.+.++...
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~ 74 (80)
T 1jww_A 4 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ 74 (80)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCSS
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCcc
Confidence 34567789999999999999999999999999999999999974 468899999999999999987653
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.89 E-value=5.1e-09 Score=84.71 Aligned_cols=64 Identities=20% Similarity=0.217 Sum_probs=58.2
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEEC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~ 68 (353)
+.+.+..|+|.+|+.+|+++|.+++||.+++||+..++++|+.+ ++...|+++|+++||.+.++
T Consensus 82 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 82 IELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred eEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 45667899999999999999999999999999999999999754 68899999999999998765
No 32
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.87 E-value=6e-09 Score=84.96 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=60.5
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCCC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPES 71 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~~ 71 (353)
+.+.+..|+|.+|+.+|+++|.+++||.+++||+..++++|+- .++...|+++|+++||.+.++...
T Consensus 76 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 145 (151)
T 1p6t_A 76 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ 145 (151)
T ss_dssp EEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSS
T ss_pred cEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCcc
Confidence 4566789999999999999999999999999999999999984 578999999999999999987653
No 33
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.87 E-value=3.4e-09 Score=98.79 Aligned_cols=64 Identities=20% Similarity=0.241 Sum_probs=58.8
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
+|+| . |+|.+|+.+|+++|.+++||.+++||+..++++|.+.++++.|+++|+++||.++++..
T Consensus 10 ~l~V--~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~ 73 (249)
T 1jk9_B 10 TYAI--P-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA 73 (249)
T ss_dssp EEEC--C-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEE
T ss_pred EEEE--e-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccC
Confidence 4554 4 88889999999999999999999999999999999999999999999999999988765
No 34
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.86 E-value=2e-09 Score=77.45 Aligned_cols=63 Identities=24% Similarity=0.251 Sum_probs=53.7
Q ss_pred CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEE
Q 018608 1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAEL 67 (353)
Q Consensus 1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL 67 (353)
|...+.+.+..|+|.+|+..|+++|.+++||.++.||+..++++|....+ +++|+++||.+.+
T Consensus 1 m~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 1 MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHL 63 (71)
T ss_dssp CCCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTC
T ss_pred CCeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccc
Confidence 54556667789999999999999999999999999999999999998765 5577888987543
No 35
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.85 E-value=1.1e-08 Score=78.61 Aligned_cols=68 Identities=13% Similarity=0.117 Sum_probs=60.4
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEECCCC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAELWPES 71 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL~~~~ 71 (353)
.+.+.+..|+|.+|+..|.++|.+++||..+.||+..++++|... ++...|+++|+++||.+.++...
T Consensus 17 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 87 (95)
T 2kkh_A 17 KSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG 87 (95)
T ss_dssp EEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence 345667889999999999999999999999999999999999864 57889999999999999987764
No 36
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.80 E-value=2.1e-08 Score=80.37 Aligned_cols=64 Identities=13% Similarity=0.058 Sum_probs=57.2
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHcCCceEE
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKNGKHAEL 67 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKtGK~AeL 67 (353)
.+.+.+..|+|..|+.+|+++|.+++||.++.||+..++++|+.+ ++.+.|+++|+++||.+.+
T Consensus 9 ~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 9 TQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 345667889999999999999999999999999999999999754 6789999999999998764
No 37
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.74 E-value=3.2e-08 Score=85.94 Aligned_cols=67 Identities=16% Similarity=0.139 Sum_probs=59.4
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECCC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
.+.+.+..|+|.+|+..|+++|.+++||.++.||+..++++|+. .++.+.|+++|+++||.+.++..
T Consensus 123 ~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 123 TTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 35567789999999999999999999999999999999999975 46889999999999999998765
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.66 E-value=9.6e-08 Score=77.18 Aligned_cols=67 Identities=13% Similarity=0.012 Sum_probs=59.7
Q ss_pred EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceEECC
Q 018608 3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAELWP 69 (353)
Q Consensus 3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~AeL~~ 69 (353)
..+.+.+..|+|.+|+..|+++|.+++||.++.||+..++++|.. .++.+.|+++|+++||.+.++.
T Consensus 4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 455677889999999999999999999999999999999999975 3678899999999999988754
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.36 E-value=1.5e-06 Score=70.72 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=54.7
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCce
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHA 65 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~A 65 (353)
.+.+.+..|+|.+|+..|+++|.+++||.++.+++..++++|.- .++...|.++|+++|+.+
T Consensus 7 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred EEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 44566788999999999999999999999999999999999974 357889999999999865
No 40
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.34 E-value=9.1e-07 Score=76.79 Aligned_cols=65 Identities=20% Similarity=0.142 Sum_probs=55.8
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEec---CCHHHHHHHHHHc---CCceEEC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGD---VAAETLIGKLEKN---GKHAELW 68 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~---VDp~~LlkaIkKt---GK~AeL~ 68 (353)
.+.+.+..|+|.+|+.+|+++|.+++||.++.||+..++++|... ++...|+++|+++ |+.+.+.
T Consensus 21 ~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~ 91 (202)
T 2rop_A 21 TLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLP 91 (202)
T ss_dssp EEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC-
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEec
Confidence 456778899999999999999999999999999999999999753 6788999999888 3666543
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.02 E-value=1.1e-05 Score=84.47 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=56.1
Q ss_pred EEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe---cCCHHHHHHHHHHcCCceE
Q 018608 6 SLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG---DVAAETLIGKLEKNGKHAE 66 (353)
Q Consensus 6 ~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG---~VDp~~LlkaIkKtGK~Ae 66 (353)
.+.+.+|+|.+|+.+|+++|.+++||.+++||+..++++|+- .++.++|+++|++.|+.+.
T Consensus 5 ~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~ 68 (723)
T 3j09_A 5 TVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVV 68 (723)
T ss_dssp EEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEES
T ss_pred EEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccc
Confidence 455789999999999999999999999999999999999974 4789999999999999975
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=88.02 E-value=0.45 Score=39.43 Aligned_cols=47 Identities=21% Similarity=0.249 Sum_probs=36.2
Q ss_pred HHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEe-cCCHHHHHHHHHHcCCce
Q 018608 19 SIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKG-DVAAETLIGKLEKNGKHA 65 (353)
Q Consensus 19 ~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG-~VDp~~LlkaIkKtGK~A 65 (353)
-.+-+.|.+++||+.|.| |.+.. +|||+| ++|.+.|.++|++.|-.+
T Consensus 22 vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvI 76 (100)
T 3bpd_A 22 IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVI 76 (100)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence 457788999999997654 44444 455678 499999999999998654
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=87.14 E-value=0.72 Score=37.97 Aligned_cols=47 Identities=17% Similarity=0.252 Sum_probs=36.3
Q ss_pred HHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEec-CCHHHHHHHHHHcCCce
Q 018608 19 SIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKGD-VAAETLIGKLEKNGKHA 65 (353)
Q Consensus 19 ~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG~-VDp~~LlkaIkKtGK~A 65 (353)
-.+-+.|.+++||+.|.+ |.+.. +|||+|+ +|.+.|.++|++.|-.+
T Consensus 21 vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~I 75 (96)
T 2x3d_A 21 VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAI 75 (96)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence 456788999999987654 44444 4566784 99999999999998654
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=85.57 E-value=0.66 Score=38.24 Aligned_cols=47 Identities=21% Similarity=0.363 Sum_probs=35.3
Q ss_pred HHHHHhHcCCCCeeEEEE-----eCCCC--EEEEEe-cCCHHHHHHHHHHcCCce
Q 018608 19 SIFLNWVLFIFGVYTTKI-----DLRQH--KVVVKG-DVAAETLIGKLEKNGKHA 65 (353)
Q Consensus 19 ~kVkKaLskIeGVesVeV-----DLe~q--kVTVtG-~VDp~~LlkaIkKtGK~A 65 (353)
-.+-+.|.+++||+.|.| |.+.. +|||.| ++|.+.|.++|++.|-.+
T Consensus 22 ~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~I 76 (97)
T 2raq_A 22 PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSI 76 (97)
T ss_dssp HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence 356677888888886654 55554 456678 499999999999998654
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=74.28 E-value=3.6 Score=32.61 Aligned_cols=38 Identities=8% Similarity=-0.003 Sum_probs=29.8
Q ss_pred EEEEEeeecCCch---hHHHHHHHhHcCCCCeeEEEEeCCC
Q 018608 3 YTLSLVLYSFSSK---LKASIFLNWVLFIFGVYTTKIDLRQ 40 (353)
Q Consensus 3 ~vl~V~L~CmsC~---~CA~kVkKaLskIeGVesVeVDLe~ 40 (353)
+.+.+.|.+..|. .=...|+++|..++||.+|+|++..
T Consensus 43 V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 43 AYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp EEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 4577788888887 3345789999999999999987654
No 46
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=71.33 E-value=4.6 Score=31.92 Aligned_cols=39 Identities=15% Similarity=0.060 Sum_probs=30.2
Q ss_pred EEEEEeeecCCchhH---HHHHHHhHcCCCCeeEEEEeCCCC
Q 018608 3 YTLSLVLYSFSSKLK---ASIFLNWVLFIFGVYTTKIDLRQH 41 (353)
Q Consensus 3 ~vl~V~L~CmsC~~C---A~kVkKaLskIeGVesVeVDLe~q 41 (353)
+.+.+.|....|... ...|+++|..++||.+|+|++...
T Consensus 44 V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~~ 85 (103)
T 1uwd_A 44 VKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFD 85 (103)
T ss_dssp EEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECCS
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEecC
Confidence 457788888888743 346899999999999999876543
No 47
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=67.28 E-value=39 Score=26.94 Aligned_cols=57 Identities=23% Similarity=0.127 Sum_probs=38.9
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEe-cCCHHHHHHHHHHcC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKG-DVAAETLIGKLEKNG 62 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG-~VDp~~LlkaIkKtG 62 (353)
+-.|.++|.-= -...|.++|.+|+||+--.+|-..++++|+= .-+...|++.|++.-
T Consensus 7 IsslvV~~~p~--~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I~ 64 (95)
T 2jsx_A 7 VCSLVVQAKSE--RISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVR 64 (95)
T ss_dssp EEEEEEEECTT--SHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHHT
T ss_pred EEEEEEEECCC--CHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHHh
Confidence 33456666542 3689999999999995444577788888854 346667777665543
No 48
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=64.11 E-value=11 Score=27.87 Aligned_cols=57 Identities=18% Similarity=0.058 Sum_probs=31.9
Q ss_pred CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHH-HHcCCc
Q 018608 1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKL-EKNGKH 64 (353)
Q Consensus 1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaI-kKtGK~ 64 (353)
|+++|...+.-..|..|. ++++.|... ||.=..+|+.... |..+++ +.+.| +.+|+.
T Consensus 1 ~v~iY~~~~~~~~Cp~C~-~ak~~L~~~-gi~y~~idI~~~~----~~~~~~-~~~~l~~~~g~~ 58 (87)
T 1aba_A 1 MFKVYGYDSNIHKCGPCD-NAKRLLTVK-KQPFEFINIMPEK----GVFDDE-KIAELLTKLGRD 58 (87)
T ss_dssp CEEEEECCTTTSCCHHHH-HHHHHHHHT-TCCEEEEESCSBT----TBCCHH-HHHHHHHHHTCS
T ss_pred CEEEEEeCCCCCcCccHH-HHHHHHHHc-CCCEEEEEeeccc----cccCHH-HHHHHHHHhCCC
Confidence 677776654444677776 566777764 6765555554211 223443 33444 566765
No 49
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=61.88 E-value=5.7 Score=31.91 Aligned_cols=39 Identities=8% Similarity=0.071 Sum_probs=29.8
Q ss_pred EEEEEeeecCCchhH---HHHHHHhH-cCCCCeeEEEEeCCCC
Q 018608 3 YTLSLVLYSFSSKLK---ASIFLNWV-LFIFGVYTTKIDLRQH 41 (353)
Q Consensus 3 ~vl~V~L~CmsC~~C---A~kVkKaL-skIeGVesVeVDLe~q 41 (353)
+.+.+.|....|... ...|+++| ..++||.+|+|++.-.
T Consensus 46 V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~ 88 (108)
T 3lno_A 46 AVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWN 88 (108)
T ss_dssp EEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECCS
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEec
Confidence 457788888888632 45788899 8999999999876543
No 50
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=48.02 E-value=53 Score=26.21 Aligned_cols=43 Identities=12% Similarity=-0.029 Sum_probs=31.1
Q ss_pred HHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCc
Q 018608 20 IFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKH 64 (353)
Q Consensus 20 kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~ 64 (353)
.| +.|.+.-||.+|+||-++++|+|.| .+.+.+.+|++..-.-
T Consensus 36 ~I-k~I~e~tGv~~IdI~eddG~V~I~g-~~~ea~~~A~~~I~~i 78 (91)
T 2cpq_A 36 NI-QQARKVPGVTAIELDEDTGTFRIYG-ESADAVKKARGFLEFV 78 (91)
T ss_dssp HH-HHHHTSTTEEEEEEETTTTEEEEEE-SSHHHHHHHHHHHSCC
T ss_pred HH-HHHHHHhCCeEEEEEcCCCEEEEEE-CCHHHHHHHHHHHHhh
Confidence 44 4466667997799987779999998 5777777776554433
No 51
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=47.38 E-value=28 Score=27.86 Aligned_cols=56 Identities=7% Similarity=-0.105 Sum_probs=34.6
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCC--------CeeEEEEeCCC--CEEEEEecCCHHHHHHHHHH
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIF--------GVYTTKIDLRQ--HKVVVKGDVAAETLIGKLEK 60 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIe--------GVesVeVDLe~--qkVTVtG~VDp~~LlkaIkK 60 (353)
.--|.|.|..+++ +.+||++|.+.. ...+|+|.+-. .-++.+-..|..+.+++|++
T Consensus 7 ra~iel~c~~~dG-Ie~IK~AL~~a~~~~~~~~~~~~~vkI~~vgaP~Y~i~~~~~D~k~ge~~L~~ 72 (93)
T 2qn6_B 7 SGLITVRTNEPLG-VEKIKEVISKALENIEQDYESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQ 72 (93)
T ss_dssp EEEEEEEECCTTT-HHHHHHHHHHHHTTHHHHCTTEEEEEEEESSTTEEEEEEEESCHHHHHHHHHH
T ss_pred EEEEEEEeCCCch-HHHHHHHHHHHHhhcccccCccceEEEEEEcCCeEEEEEEecCHHHHHHHHHH
Confidence 3457899999987 889999996432 22235554432 22333445777776666654
No 52
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=37.45 E-value=52 Score=24.95 Aligned_cols=57 Identities=9% Similarity=-0.045 Sum_probs=41.2
Q ss_pred EEEEeeecCCchhHHHHHHHhHcCCC-CeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEEC
Q 018608 4 TLSLVLYSFSSKLKASIFLNWVLFIF-GVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 4 vl~V~L~CmsC~~CA~kVkKaLskIe-GVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~ 68 (353)
.+.|.+.++.|-.=+-.++++|.++. | +.++ |.++-......|.+.++++|+.+..+
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~G-~~l~-------V~~dd~~a~~di~~~~~~~G~~~~~~ 67 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQPG-ETLL-------IIADDPATTRDIPGFCTFMEHELVAK 67 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCTT-CEEE-------EEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCCC-CEEE-------EEECCccHHHHHHHHHHHCCCEEEEE
Confidence 46688889999988889999999984 3 2232 23333455567888889999987654
No 53
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=36.96 E-value=33 Score=27.60 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=35.7
Q ss_pred CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCce
Q 018608 1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHA 65 (353)
Q Consensus 1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~A 65 (353)
|+++|... .|..|. ++++.|.. .||.=..+|+... ..+.++|.+.|.++|..+
T Consensus 1 Mi~iY~~~----~C~~c~-ka~~~L~~-~gi~~~~~di~~~------~~~~~el~~~l~~~~~~~ 53 (120)
T 3l78_A 1 MVTLFLSP----SCTSCR-KARAWLNR-HDVVFQEHNIMTS------PLSRDELLKILSYTENGT 53 (120)
T ss_dssp CEEEEECS----SCHHHH-HHHHHHHH-TTCCEEEEETTTS------CCCHHHHHHHHHHCSSTH
T ss_pred CEEEEeCC----CCHHHH-HHHHHHHH-cCCCeEEEecccC------CCcHHHHHHHHhhcCCCH
Confidence 76666443 566555 55676766 4787666776653 478889999998887653
No 54
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=32.60 E-value=1.2e+02 Score=26.97 Aligned_cols=64 Identities=9% Similarity=0.004 Sum_probs=38.1
Q ss_pred EEEeeecCCchhHHHHHHHhHcCC-------CCeeEEEEeCCC--CEEEEEecCCHHH-----------HHHHHHHcCCc
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFI-------FGVYTTKIDLRQ--HKVVVKGDVAAET-----------LIGKLEKNGKH 64 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskI-------eGVesVeVDLe~--qkVTVtG~VDp~~-----------LlkaIkKtGK~ 64 (353)
--|.|.|..+++ +..|+++|..- +.+ .|+|.+-. .-++.+-..|..+ |.+.|++.|-.
T Consensus 93 a~ieltc~~~dG-Ie~IK~AL~~a~~~~~~~~~~-~ikI~lvgaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~ 170 (188)
T 1yz7_A 93 AEFEITVPKPNG-VEIIKEALIRARDRANKEKDV-EVKFTYLGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGE 170 (188)
T ss_dssp EEEEEECCSTTH-HHHHHHHHHHHHHHHHTSTTC-EEEEEECSTTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEEEEEeCCCch-HHHHHHHHHHHHhcccCCCCC-cEEEEEEcCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 357899999988 88999999532 233 24544322 2222233455543 44455566666
Q ss_pred eEECCC
Q 018608 65 AELWPE 70 (353)
Q Consensus 65 AeL~~~ 70 (353)
..+.-.
T Consensus 171 ~~v~r~ 176 (188)
T 1yz7_A 171 ATLLRK 176 (188)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 666665
No 55
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=31.14 E-value=80 Score=28.13 Aligned_cols=58 Identities=10% Similarity=-0.034 Sum_probs=38.5
Q ss_pred ecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECCC
Q 018608 10 YSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWPE 70 (353)
Q Consensus 10 ~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~~ 70 (353)
++.=|-.|+.+|..+|..-.||..|-+=...-- . -+.+....++.|+++|-.++++..
T Consensus 90 TlePC~~Ca~aIi~al~~~~gI~rVV~~~~d~~--~-~~p~~~~g~~~L~~aGI~V~~~~~ 147 (190)
T 2nyt_A 90 SSSPCAACADRIIKTLSKTKNLRLLILVGRLFM--W-EEPEIQAALKKLKEAGCKLRIMKP 147 (190)
T ss_pred EcChHHHHHHHHHHhhhhcCCccEEEEEeecCC--c-CChHHHHHHHHHHHCCCEEEEecH
Confidence 445588899999999999999987654211000 0 011224677888999999887543
No 56
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=30.82 E-value=75 Score=24.69 Aligned_cols=33 Identities=9% Similarity=-0.110 Sum_probs=19.3
Q ss_pred EeeecCCchhHHHHH------HHhHcCCCCeeEEEEeCC
Q 018608 7 LVLYSFSSKLKASIF------LNWVLFIFGVYTTKIDLR 39 (353)
Q Consensus 7 V~L~CmsC~~CA~kV------kKaLskIeGVesVeVDLe 39 (353)
|...-..|..|..-. .+....+.+|.-+.||..
T Consensus 36 v~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~ 74 (134)
T 2fwh_A 36 LDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 74 (134)
T ss_dssp EEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECT
T ss_pred EEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCC
Confidence 445566788887633 233334456766666664
No 57
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=30.13 E-value=78 Score=25.08 Aligned_cols=57 Identities=7% Similarity=-0.107 Sum_probs=40.7
Q ss_pred EEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEEC
Q 018608 5 LSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 5 l~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~ 68 (353)
+.|++.++.|-.=+-+++++|.+|.-=+.++| +++-......|.+.++.+|+.+...
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~Ge~L~V-------l~dd~~a~~dI~~~~~~~G~~v~~~ 83 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKPGEILEV-------WIDYPMSKERIPETVKKLGHEVLEI 83 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCTTCEEEE-------EESSCTHHHHHHHHHHHSSCCEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCCCCEEEE-------EECCccHHHHHHHHHHHCCCEEEEE
Confidence 45888899999888899999999842122332 3333455677888889999987654
No 58
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=29.55 E-value=40 Score=27.31 Aligned_cols=44 Identities=16% Similarity=0.017 Sum_probs=30.8
Q ss_pred CchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCc
Q 018608 13 SSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKH 64 (353)
Q Consensus 13 sC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~ 64 (353)
.|..|. ++++.|.. .||.=..+|+... ..+.++|.+.|+++|..
T Consensus 12 ~C~~c~-ka~~~L~~-~gi~~~~~di~~~------~~~~~eL~~~l~~~g~~ 55 (120)
T 3fz4_A 12 KCSTCR-RAKAELDD-LAWDYDAIDIKKN------PPAASLIRNWLENSGLE 55 (120)
T ss_dssp SCHHHH-HHHHHHHH-HTCCEEEEETTTS------CCCHHHHHHHHHHSCCC
T ss_pred CChHHH-HHHHHHHH-cCCceEEEEeccC------chhHHHHHHHHHHcCCC
Confidence 566665 44566655 5777666776653 47889999999999854
No 59
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=28.97 E-value=75 Score=27.87 Aligned_cols=47 Identities=9% Similarity=0.013 Sum_probs=38.0
Q ss_pred HHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHH-----HHcCCceE
Q 018608 19 SIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKL-----EKNGKHAE 66 (353)
Q Consensus 19 ~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaI-----kKtGK~Ae 66 (353)
..++.+|..+ |-++|..=+.++-|+++...+.+.|..+| ++.|+++.
T Consensus 25 adLr~~l~~l-Gf~~V~TyI~SGNvvF~s~~~~~~l~~~ie~~l~~~fg~~v~ 76 (183)
T 2hiy_A 25 AELRQELTNL-GLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHYPFIQS 76 (183)
T ss_dssp HHHHHHHHHH-TCEEEEEETTTTEEEEEECSCHHHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHc-CCccceEEEecCCEEEecCCCHHHHHHHHHHHHHHhcCCCCC
Confidence 5688888887 89999999999999999877867666655 46787754
No 60
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=28.12 E-value=65 Score=23.50 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=33.8
Q ss_pred CeEEEEEeeecCCchhHH----HHHHHhHcCCCCeeEEEEeCC--------CCEEEEEecCCHHHHHHHH
Q 018608 1 MFYTLSLVLYSFSSKLKA----SIFLNWVLFIFGVYTTKIDLR--------QHKVVVKGDVAAETLIGKL 58 (353)
Q Consensus 1 ~~~vl~V~L~CmsC~~CA----~kVkKaLskIeGVesVeVDLe--------~qkVTVtG~VDp~~LlkaI 58 (353)
|.+++.+.+....++ ++ .+..+.|+..-|+ .|.|+-. ...|+|.|. ++.+..|+
T Consensus 1 ~~~~~~i~Ip~~~vg-~IIGkgG~~Ik~I~~~tga-~I~i~~~~~~~~~~~~~~v~I~G~--~~~v~~A~ 66 (76)
T 1dtj_A 1 MKELVEMAVPENLVG-AILGKGGKTLVEYQELTGA-RIQISKKGEFLPGTRNRRVTITGS--PAATQAAQ 66 (76)
T ss_dssp CCEEEEEEEETTTHH-HHHCSTTHHHHHHHHHHCC-EEEECCTTCCSTTCCEEEEEEEES--HHHHHHHH
T ss_pred CceEEEEEEChHHcc-eEECCCchHHHHHHHHhCC-EEEECcCCCCCCCCceeEEEEEeC--HHHHHHHH
Confidence 667777777776654 22 2334446666676 5777653 258999997 55665554
No 61
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=27.38 E-value=71 Score=25.62 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=30.6
Q ss_pred HHHHhHcCCCCeeEEEEeCCCCEEEEEe--cCCHHHHHHHHHH
Q 018608 20 IFLNWVLFIFGVYTTKIDLRQHKVVVKG--DVAAETLIGKLEK 60 (353)
Q Consensus 20 kVkKaLskIeGVesVeVDLe~qkVTVtG--~VDp~~LlkaIkK 60 (353)
-+-++|-.|+||.+|-+. ..-|||+- .+|++.|+..|..
T Consensus 40 PLA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 40 EFINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp HHHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 455667799999999876 56788864 5899999888754
No 62
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=26.59 E-value=86 Score=24.90 Aligned_cols=59 Identities=8% Similarity=-0.110 Sum_probs=41.4
Q ss_pred EEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEEC
Q 018608 3 YTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 3 ~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~ 68 (353)
..+.|++.+..|-.=+-+++++|.+|+-=+.++| +++-......|.+.++.+|+.+..+
T Consensus 26 ~~~~LD~rGl~CP~PvlktkkaL~~l~~Ge~L~V-------l~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 26 PDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEV-------VSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEEEECSBCCSSSSSTHHHHHHTTTCCSSCEEEE-------EEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred cCeEEeCCCCCCCHHHHHHHHHHHcCCCCCEEEE-------EECCcchHHHHHHHHHHCCCEEEEE
Confidence 3456888999998778889999998842222332 3333455677888889999987653
No 63
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=26.03 E-value=34 Score=27.84 Aligned_cols=52 Identities=10% Similarity=0.001 Sum_probs=33.3
Q ss_pred CeEEEEEeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCc
Q 018608 1 MFYTLSLVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKH 64 (353)
Q Consensus 1 ~~~vl~V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~ 64 (353)
|+++|. --.|..|. ++++.|... ||.=..+|+... ..+.++|.+.++++|..
T Consensus 2 mi~lY~----~~~C~~C~-ka~~~L~~~-gi~y~~~di~~~------~~~~~el~~~l~~~~~~ 53 (132)
T 1z3e_A 2 MVTLYT----SPSCTSCR-KARAWLEEH-EIPFVERNIFSE------PLSIDEIKQILRMTEDG 53 (132)
T ss_dssp CEEEEE----CTTCHHHH-HHHHHHHHT-TCCEEEEETTTS------CCCHHHHHHHHHTCSSC
T ss_pred eEEEEe----CCCChHHH-HHHHHHHHc-CCceEEEEccCC------CccHHHHHHHHHHcCCC
Confidence 555443 34677775 567777764 776556666542 25578888888877764
No 64
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=24.89 E-value=1.4e+02 Score=22.05 Aligned_cols=33 Identities=6% Similarity=-0.280 Sum_probs=18.5
Q ss_pred EeeecCCchhHHHH---HHHhHcCCCCeeEEEEeCC
Q 018608 7 LVLYSFSSKLKASI---FLNWVLFIFGVYTTKIDLR 39 (353)
Q Consensus 7 V~L~CmsC~~CA~k---VkKaLskIeGVesVeVDLe 39 (353)
|......|..|... +++...++.+|.=|.|+..
T Consensus 30 l~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~ 65 (136)
T 1zzo_A 30 LWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGL 65 (136)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECS
T ss_pred EEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 34446678888653 4444444556665555543
No 65
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=24.30 E-value=1e+02 Score=25.41 Aligned_cols=25 Identities=16% Similarity=0.072 Sum_probs=17.2
Q ss_pred CchhHHHHHHHhHcCCCCeeEEEEeCC
Q 018608 13 SSKLKASIFLNWVLFIFGVYTTKIDLR 39 (353)
Q Consensus 13 sC~~CA~kVkKaLskIeGVesVeVDLe 39 (353)
.|..|. ++++.|..+ ||.=.++|+.
T Consensus 49 ~Cp~C~-~ak~~L~~~-gv~y~~vdI~ 73 (135)
T 2wci_A 49 SCGFSA-QAVQALAAC-GERFAYVDIL 73 (135)
T ss_dssp SSHHHH-HHHHHHHTT-CSCCEEEEGG
T ss_pred CCccHH-HHHHHHHHc-CCceEEEECC
Confidence 688887 567888886 6764555554
No 66
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=24.17 E-value=17 Score=30.19 Aligned_cols=34 Identities=9% Similarity=0.105 Sum_probs=23.9
Q ss_pred HhHcCCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHH
Q 018608 23 NWVLFIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLE 59 (353)
Q Consensus 23 KaLskIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIk 59 (353)
+.+..++ .++|+.+.+.||++|.++...-.++++
T Consensus 71 ~~~~~l~---~i~V~V~~g~VtLsG~v~s~~~r~~a~ 104 (132)
T 2kgs_A 71 TASVPIP---DFGLKVERDTVTLTGTAPSSEHKDAVK 104 (132)
T ss_dssp HHHTTCT---TCEEEEEETEEEEECEESSHHHHHHHH
T ss_pred HhcCcCC---ceEEEEECCEEEEEEEECCHHHHHHHH
Confidence 4445554 557777899999999988776555553
No 67
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A
Probab=23.43 E-value=78 Score=24.17 Aligned_cols=63 Identities=11% Similarity=0.022 Sum_probs=41.1
Q ss_pred EeeecCCchhHHHHHHHhHcCCCCeeEEEEeCCCCEEEEE---ecCCHHHHHHHHHHcCCceEECCCC
Q 018608 7 LVLYSFSSKLKASIFLNWVLFIFGVYTTKIDLRQHKVVVK---GDVAAETLIGKLEKNGKHAELWPES 71 (353)
Q Consensus 7 V~L~CmsC~~CA~kVkKaLskIeGVesVeVDLe~qkVTVt---G~VDp~~LlkaIkKtGK~AeL~~~~ 71 (353)
+.+.+.-.=+.+..+++.|...++...|.+|+.. |+.. |----..+++++++.|..+.|+...
T Consensus 20 ~~l~G~L~f~~a~~~~~~l~~~~~~~~vvlDls~--v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~ 85 (99)
T 3oiz_A 20 YRVEGQLFYASVEDFMAAFDFREALDRVVIDVSR--AHIWDISSVQALDMAVLKFRREGAEVRIVGMN 85 (99)
T ss_dssp EEEEEEECGGGHHHHHHTCCTTSCCSEEEEEEEE--EEECSHHHHHHHHHHHHHHHHTTCEEEEESHH
T ss_pred EEEeeEEehhhHHHHHHHHhhcCCCCEEEEECCC--CCccCHHHHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3444444445678999988876777778887765 4432 2223344566667889999988763
No 68
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=22.66 E-value=86 Score=24.21 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=40.6
Q ss_pred EEeeecCCchhHHHHHHHhHcCC--CCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEEC
Q 018608 6 SLVLYSFSSKLKASIFLNWVLFI--FGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELW 68 (353)
Q Consensus 6 ~V~L~CmsC~~CA~kVkKaLskI--eGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~ 68 (353)
.|++.++.|-.=+-.++++|.++ .| +.++| +++-......|.+.++.+|+.+...
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G-~~L~V-------~~dd~~a~~dI~~~~~~~G~~v~~~ 59 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG-GVVTV-------LVDNDISRQNLQKMAEGMGYQSEYL 59 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC-CEEEE-------EESSHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC-CEEEE-------EECCccHHHHHHHHHHHCCCEEEEE
Confidence 37888899998888999999998 45 33332 3333456678888889999998654
No 69
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=21.71 E-value=40 Score=28.39 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=27.3
Q ss_pred CCEEEEEecCCHHHHHHHHHHc-CCceEECCC
Q 018608 40 QHKVVVKGDVAAETLIGKLEKN-GKHAELWPE 70 (353)
Q Consensus 40 ~qkVTVtG~VDp~~LlkaIkKt-GK~AeL~~~ 70 (353)
+.-|.|+|+-|-.-|+++|++. |+++++++.
T Consensus 110 d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~ 141 (165)
T 2qip_A 110 DRVILVSGDGDFSLLVERIQQRYNKKVTVYGV 141 (165)
T ss_dssp SEEEEECCCGGGHHHHHHHHHHHCCEEEEEEC
T ss_pred CEEEEEECChhHHHHHHHHHHHcCcEEEEEeC
Confidence 4457789999999999999996 999999987
No 70
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=21.32 E-value=2.5e+02 Score=22.91 Aligned_cols=57 Identities=9% Similarity=0.042 Sum_probs=30.4
Q ss_pred EEEEeeecCCch---hHHHHHHHhHcCCCC-eeEEEEeCCC-C--EEEEE-----------ecCCHHHHHHHHHH
Q 018608 4 TLSLVLYSFSSK---LKASIFLNWVLFIFG-VYTTKIDLRQ-H--KVVVK-----------GDVAAETLIGKLEK 60 (353)
Q Consensus 4 vl~V~L~CmsC~---~CA~kVkKaLskIeG-VesVeVDLe~-q--kVTVt-----------G~VDp~~LlkaIkK 60 (353)
+--.+.+|-.|+ .++.-.+..|..+++ +.+|+..... + .|+|. |-.+..+|++.|+.
T Consensus 4 ~~V~I~YC~~C~w~~Ra~~laqeLl~tF~~~l~~v~l~P~~~G~FEV~vng~lV~SKk~~ggFPe~~eLkq~Vrd 78 (105)
T 2p0g_A 4 AQIEIYYCRQCNWMLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWERKQEGGFPEAKVLKQRVRD 78 (105)
T ss_dssp EEEEEEEETTTTCHHHHHHHHHHHHHHTTTTEEEEEEEEESTTCEEEEETTEEEEEHHHHTSCCCHHHHHHHHHT
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHcCcccceEEEEeCCCceEEEEECCEEEEEEecCCCCCCHHHHHHHHHH
Confidence 334567899998 344444555555543 3333332221 1 22221 23588888888865
No 71
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=20.65 E-value=1.4e+02 Score=24.97 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=35.3
Q ss_pred CCCCeeEEEEeCCCCEEEEEecCCHHHHHHHHHHcCCceEECC
Q 018608 27 FIFGVYTTKIDLRQHKVVVKGDVAAETLIGKLEKNGKHAELWP 69 (353)
Q Consensus 27 kIeGVesVeVDLe~qkVTVtG~VDp~~LlkaIkKtGK~AeL~~ 69 (353)
++.|+..++| +.++.+.|-|.--.+++++++...|..+..-+
T Consensus 42 Rt~GiRqfEi-~n~G~fRI~gYk~se~~~~~f~slGm~~K~~~ 83 (108)
T 1kaf_A 42 RTNGIRNFEI-NNNGNMRIFGYKMMEHHIQKFTDIGMSCKIAK 83 (108)
T ss_dssp EETTEEEEEE-CTTSEEEEEEESCCHHHHHHHHTTTCEEEECT
T ss_pred ccCceeEEEE-ecCCcEEEEEecCCHHHHHHHHhcCceEEEcC
Confidence 3478889998 78889999999999999999999997776543
No 72
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=20.33 E-value=1.5e+02 Score=23.68 Aligned_cols=40 Identities=8% Similarity=0.066 Sum_probs=23.7
Q ss_pred CchhHHHHHHHhHcCCCCee-EEEEeCCCCEEEEEecCCHHHHHHHH-HHcCCc
Q 018608 13 SSKLKASIFLNWVLFIFGVY-TTKIDLRQHKVVVKGDVAAETLIGKL-EKNGKH 64 (353)
Q Consensus 13 sC~~CA~kVkKaLskIeGVe-sVeVDLe~qkVTVtG~VDp~~LlkaI-kKtGK~ 64 (353)
.|..|. ++++.|..+ ||. =.++|+.. | ..+.+.| +.+|+.
T Consensus 34 ~Cp~C~-~ak~lL~~~-gv~~~~~vdV~~---------d-~~~~~~l~~~tg~~ 75 (118)
T 2wem_A 34 QCGFSN-AVVQILRLH-GVRDYAAYNVLD---------D-PELRQGIKDYSNWP 75 (118)
T ss_dssp SSHHHH-HHHHHHHHT-TCCCCEEEESSS---------C-HHHHHHHHHHHTCC
T ss_pred ccHHHH-HHHHHHHHc-CCCCCEEEEcCC---------C-HHHHHHHHHHhCCC
Confidence 688887 667888876 773 44455542 2 3455566 445543
No 73
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=20.23 E-value=1.1e+02 Score=23.21 Aligned_cols=16 Identities=6% Similarity=-0.211 Sum_probs=10.0
Q ss_pred CCchhHHHHHHHhHcCC
Q 018608 12 FSSKLKASIFLNWVLFI 28 (353)
Q Consensus 12 msC~~CA~kVkKaLskI 28 (353)
..|..|. .++..|.++
T Consensus 9 ~~C~~C~-~~~~~L~~~ 24 (87)
T 1ttz_A 9 DDCHLCD-QAVEALAQA 24 (87)
T ss_dssp SSCHHHH-HHHHHHHHT
T ss_pred CCCchHH-HHHHHHHHH
Confidence 4577776 555667665
Done!