Query 018617
Match_columns 353
No_of_seqs 323 out of 1688
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 02:36:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018617.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018617hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 2.1E-88 4.5E-93 617.6 27.0 286 68-353 69-360 (369)
2 PLN03158 methionine aminopepti 100.0 1.1E-72 2.4E-77 553.3 33.3 285 68-352 90-380 (396)
3 COG0024 Map Methionine aminope 100.0 2.9E-63 6.3E-68 456.4 27.6 244 109-352 4-251 (255)
4 PRK12897 methionine aminopepti 100.0 6.7E-58 1.4E-62 426.2 29.0 246 108-353 2-248 (248)
5 PRK07281 methionine aminopepti 100.0 2E-57 4.3E-62 429.8 29.3 245 108-352 2-279 (286)
6 PRK12318 methionine aminopepti 100.0 1.3E-56 2.8E-61 426.1 30.0 246 108-353 41-289 (291)
7 PRK12896 methionine aminopepti 100.0 9.4E-56 2E-60 412.7 29.4 247 106-352 6-254 (255)
8 TIGR00500 met_pdase_I methioni 100.0 3.2E-55 6.8E-60 407.6 29.6 244 109-352 2-246 (247)
9 PRK05716 methionine aminopepti 100.0 2.4E-54 5.2E-59 402.5 29.0 246 108-353 3-249 (252)
10 cd01086 MetAP1 Methionine Amin 100.0 1.3E-50 2.9E-55 374.3 28.4 237 116-352 1-238 (238)
11 PRK09795 aminopeptidase; Provi 100.0 3.7E-50 8E-55 393.3 25.6 226 103-353 120-351 (361)
12 COG0006 PepP Xaa-Pro aminopept 100.0 3.1E-48 6.7E-53 382.7 24.6 227 101-352 145-375 (384)
13 PRK10879 proline aminopeptidas 100.0 6.5E-48 1.4E-52 385.6 25.8 234 103-352 166-419 (438)
14 cd01087 Prolidase Prolidase. E 100.0 1.1E-47 2.5E-52 356.0 25.2 223 116-352 1-243 (243)
15 cd01090 Creatinase Creatine am 100.0 2E-47 4.4E-52 351.5 25.8 224 116-352 1-228 (228)
16 PRK15173 peptidase; Provisiona 100.0 1.8E-47 3.8E-52 368.8 25.0 227 101-353 86-315 (323)
17 PRK14575 putative peptidase; P 100.0 6.4E-47 1.4E-51 375.5 24.9 227 101-353 169-398 (406)
18 TIGR02993 ectoine_eutD ectoine 100.0 3.7E-47 8.1E-52 375.7 23.1 226 101-353 149-383 (391)
19 PRK14576 putative endopeptidas 100.0 4.3E-46 9.3E-51 369.5 25.1 226 102-353 169-397 (405)
20 TIGR00495 crvDNA_42K 42K curve 100.0 9.2E-45 2E-49 356.5 28.0 244 108-352 11-336 (389)
21 cd01092 APP-like Similar to Pr 100.0 7.4E-44 1.6E-48 321.7 25.0 207 116-347 1-208 (208)
22 PRK13607 proline dipeptidase; 100.0 2.2E-44 4.8E-49 359.9 23.2 244 102-352 153-438 (443)
23 PRK08671 methionine aminopepti 100.0 1.5E-42 3.3E-47 330.0 26.9 227 115-352 1-291 (291)
24 cd01085 APP X-Prolyl Aminopept 100.0 7.4E-43 1.6E-47 320.3 23.7 208 118-349 6-221 (224)
25 PTZ00053 methionine aminopepti 100.0 1.9E-42 4.1E-47 343.0 28.0 237 107-352 149-466 (470)
26 TIGR00501 met_pdase_II methion 100.0 2.2E-41 4.7E-46 322.4 26.9 229 113-352 2-295 (295)
27 cd01088 MetAP2 Methionine Amin 100.0 2E-41 4.3E-46 322.3 26.2 226 116-352 1-291 (291)
28 PF00557 Peptidase_M24: Metall 100.0 1.1E-41 2.3E-46 308.0 22.3 204 117-344 1-207 (207)
29 cd01089 PA2G4-like Related to 100.0 8.7E-41 1.9E-45 307.4 23.9 216 116-352 1-228 (228)
30 cd01066 APP_MetAP A family inc 100.0 1.1E-40 2.5E-45 298.2 23.9 206 116-347 1-207 (207)
31 cd01091 CDC68-like Related to 100.0 7.1E-41 1.5E-45 310.6 23.1 225 116-352 1-243 (243)
32 KOG2414 Putative Xaa-Pro amino 100.0 3.4E-39 7.3E-44 306.1 17.3 232 103-352 221-471 (488)
33 KOG2737 Putative metallopeptid 100.0 2.2E-34 4.7E-39 270.9 16.3 248 101-352 176-466 (492)
34 KOG1189 Global transcriptional 99.9 3.2E-23 7E-28 208.8 16.4 237 99-353 126-378 (960)
35 KOG2413 Xaa-Pro aminopeptidase 99.9 5.6E-23 1.2E-27 204.4 16.3 227 101-349 298-538 (606)
36 KOG2775 Metallopeptidase [Gene 99.9 7.6E-22 1.6E-26 181.4 15.6 233 111-352 80-393 (397)
37 KOG2776 Metallopeptidase [Gene 99.8 1.7E-18 3.7E-23 163.0 18.4 243 108-352 13-339 (398)
38 COG5406 Nucleosome binding fac 99.7 4.4E-16 9.4E-21 155.0 13.8 236 103-353 163-418 (1001)
39 cd01086 MetAP1 Methionine Amin 97.5 0.0013 2.9E-08 60.5 11.4 103 223-344 2-105 (238)
40 cd01066 APP_MetAP A family inc 97.4 0.0021 4.6E-08 56.8 12.0 102 117-220 102-204 (207)
41 PLN03158 methionine aminopepti 97.4 0.0013 2.7E-08 65.5 11.0 116 208-344 127-247 (396)
42 cd01092 APP-like Similar to Pr 97.2 0.0051 1.1E-07 55.0 11.3 99 117-220 103-205 (208)
43 cd01088 MetAP2 Methionine Amin 97.1 0.0043 9.2E-08 59.3 10.8 97 223-344 2-100 (291)
44 PRK05716 methionine aminopepti 97.0 0.0073 1.6E-07 56.0 11.3 100 118-220 119-240 (252)
45 PRK12896 methionine aminopepti 96.9 0.0071 1.5E-07 56.2 10.3 111 213-344 5-120 (255)
46 TIGR00500 met_pdase_I methioni 96.9 0.015 3.2E-07 53.9 11.9 100 118-220 117-238 (247)
47 PRK15173 peptidase; Provisiona 96.8 0.015 3.3E-07 56.4 11.6 102 118-220 203-306 (323)
48 PRK12897 methionine aminopepti 96.7 0.015 3.3E-07 54.0 10.3 99 119-220 119-239 (248)
49 PRK14575 putative peptidase; P 96.6 0.021 4.5E-07 57.2 11.6 99 118-220 286-389 (406)
50 cd01090 Creatinase Creatine am 96.6 0.024 5.1E-07 52.2 11.1 100 118-220 110-220 (228)
51 PRK14576 putative endopeptidas 96.6 0.025 5.4E-07 56.6 11.9 102 118-220 285-388 (405)
52 TIGR02993 ectoine_eutD ectoine 96.5 0.024 5.3E-07 56.4 11.2 97 118-220 271-374 (391)
53 PRK12318 methionine aminopepti 96.5 0.028 6.1E-07 53.7 11.1 87 118-207 159-248 (291)
54 COG0024 Map Methionine aminope 96.5 0.024 5.2E-07 53.0 10.1 87 223-311 12-101 (255)
55 PRK08671 methionine aminopepti 96.4 0.058 1.3E-06 51.5 12.6 95 118-219 102-205 (291)
56 PRK09795 aminopeptidase; Provi 96.4 0.049 1.1E-06 53.5 12.3 102 112-220 235-342 (361)
57 cd01091 CDC68-like Related to 96.3 0.035 7.5E-07 51.7 10.5 100 117-220 119-234 (243)
58 PRK07281 methionine aminopepti 96.3 0.038 8.2E-07 52.7 10.6 83 118-205 149-237 (286)
59 PF00557 Peptidase_M24: Metall 96.3 0.046 1E-06 48.9 10.7 97 223-342 1-98 (207)
60 cd01087 Prolidase Prolidase. E 96.1 0.058 1.3E-06 49.8 10.8 102 118-220 104-235 (243)
61 TIGR00495 crvDNA_42K 42K curve 96.0 0.068 1.5E-06 53.2 11.3 101 224-344 21-130 (389)
62 cd01089 PA2G4-like Related to 96.0 0.079 1.7E-06 48.6 10.8 99 117-220 120-220 (228)
63 TIGR00501 met_pdase_II methion 95.9 0.11 2.3E-06 49.8 11.7 97 223-344 6-104 (295)
64 KOG2738 Putative methionine am 95.9 0.043 9.4E-07 51.8 8.5 86 223-311 123-211 (369)
65 COG0006 PepP Xaa-Pro aminopept 94.8 0.24 5.3E-06 49.0 10.7 96 119-220 264-367 (384)
66 PTZ00053 methionine aminopepti 94.4 0.44 9.5E-06 48.5 11.3 96 225-343 161-262 (470)
67 PRK10879 proline aminopeptidas 93.9 0.65 1.4E-05 47.0 11.5 101 119-220 284-411 (438)
68 cd01085 APP X-Prolyl Aminopept 90.9 4.1 8.8E-05 37.3 11.8 96 121-220 115-216 (224)
69 PRK13607 proline dipeptidase; 89.5 2.3 5E-05 43.1 9.6 89 119-207 270-391 (443)
70 KOG2776 Metallopeptidase [Gene 87.2 5.1 0.00011 39.2 9.7 93 224-345 23-133 (398)
71 KOG2775 Metallopeptidase [Gene 81.3 22 0.00047 34.2 10.9 83 223-311 86-175 (397)
72 KOG1189 Global transcriptional 69.7 17 0.00037 38.9 7.6 98 119-220 259-368 (960)
73 PF07305 DUF1454: Protein of u 67.2 36 0.00078 30.4 8.0 74 223-309 115-188 (200)
74 cd01666 TGS_DRG_C TGS_DRG_C: 66.5 20 0.00044 27.0 5.6 52 137-199 21-73 (75)
75 PF00254 FKBP_C: FKBP-type pep 55.5 18 0.0004 27.6 3.9 51 188-247 2-59 (94)
76 PRK01490 tig trigger factor; P 52.8 43 0.00093 33.7 7.0 46 140-209 131-176 (435)
77 COG5406 Nucleosome binding fac 49.8 54 0.0012 34.7 7.0 82 114-203 299-385 (1001)
78 TIGR00115 tig trigger factor. 46.0 62 0.0013 32.2 6.9 57 140-220 119-180 (408)
79 cd04938 TGS_Obg-like TGS_Obg-l 40.4 45 0.00099 25.1 3.8 47 137-199 28-74 (76)
80 PF10415 FumaraseC_C: Fumarase 32.1 58 0.0013 22.9 3.0 34 118-151 10-48 (55)
81 PF03477 ATP-cone: ATP cone do 31.1 45 0.00097 25.4 2.6 36 124-159 39-74 (90)
82 PF05184 SapB_1: Saposin-like 31.1 1E+02 0.0023 19.3 3.9 34 122-155 3-36 (39)
83 PF09506 Salt_tol_Pase: Glucos 28.8 1.9E+02 0.0042 28.3 6.8 52 111-162 97-148 (381)
84 TIGR02399 salt_tol_Pase glucos 27.1 2.1E+02 0.0045 28.2 6.7 52 111-162 103-154 (389)
85 PF12631 GTPase_Cys_C: Catalyt 27.1 1.4E+02 0.003 22.1 4.5 42 221-262 10-51 (73)
86 cd01669 TGS_Ygr210_C TGS_Ygr21 24.5 1.9E+02 0.004 21.8 4.8 48 137-199 27-74 (76)
87 COG0544 Tig FKBP-type peptidyl 23.8 1.6E+02 0.0034 30.0 5.5 44 141-208 132-175 (441)
88 PRK05423 hypothetical protein; 21.2 1.3E+02 0.0027 23.9 3.3 27 129-155 44-70 (104)
89 KOG2414 Putative Xaa-Pro amino 20.8 4.9E+02 0.011 26.4 8.0 90 110-205 334-438 (488)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-88 Score=617.60 Aligned_cols=286 Identities=62% Similarity=1.041 Sum_probs=275.5
Q ss_pred CCCCCCCCCcccCCCCCCCCCCCCCCCcccCCC----CCCCCC-CCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018617 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQK----PIGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (353)
Q Consensus 68 ~~~~~~~~~~~~~s~~~~vp~~i~~p~y~~~~~----~~~~~~-~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvT 142 (353)
.|.++++|||+++||+++||+||++|+|+..+. .+.... ...|+++++|+.||+||+|+++++++|..+++||+|
T Consensus 69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT 148 (369)
T KOG2738|consen 69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT 148 (369)
T ss_pred cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 478999999999999999999999999998853 334433 568999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCC
Q 018617 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (353)
Q Consensus 143 e~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~ 222 (353)
++|||+++|++++++|+|||||||++||+++|+|+|+++|||+|+.|+||+||||+||++++++|||+|+++||+||+++
T Consensus 149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vd 228 (369)
T KOG2738|consen 149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVD 228 (369)
T ss_pred HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeeccCCccccCccccccCCC-CCceecCCc
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVLNQ 301 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~~-~~~~L~~Gm 301 (353)
++.++|++++++|++.||+.||||+++++|++.|++++.++||++++.|+|||||..||..|.|.||.++ ..++|++||
T Consensus 229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~ 308 (369)
T KOG2738|consen 229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQ 308 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCcceeecCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875 678999999
Q ss_pred EEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCeEeCCCC
Q 018617 302 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 353 (353)
Q Consensus 302 vftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~eiLT~~ 353 (353)
+|||||||+.|..+..+|+|+||++|+||+.+||||||+|||++|+||||++
T Consensus 309 tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~r 360 (369)
T KOG2738|consen 309 TFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTKR 360 (369)
T ss_pred eEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhcc
Confidence 9999999999999999999999999999999999999999999999999974
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.1e-72 Score=553.28 Aligned_cols=285 Identities=50% Similarity=0.879 Sum_probs=272.4
Q ss_pred CCCCCCCCCcccCCCCCCCCCCCCCCCcccCCCC-----CCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018617 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP-----IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (353)
Q Consensus 68 ~~~~~~~~~~~~~s~~~~vp~~i~~p~y~~~~~~-----~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvT 142 (353)
.|++++++||+.+||.++||+||++|+|+..+.+ +.+.+.|.|||++||+.||+|+++++++++.+.+.++||+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvT 169 (396)
T PLN03158 90 DFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVT 169 (396)
T ss_pred CCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 4789999999999999999999999999987542 24556799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCC
Q 018617 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (353)
Q Consensus 143 e~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~ 222 (353)
|.||++++++.++++|++|++++|.+||+++|+|.|+++|||+|++++|++||+|+||++++++||++|++|||+||+++
T Consensus 170 e~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~ 249 (396)
T PLN03158 170 TDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVD 249 (396)
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeeccCCccccCccccccCCC-CCceecCCc
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVLNQ 301 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~~-~~~~L~~Gm 301 (353)
++++++++++++|++++++++|||++++||+++++++++++||.++++++|||||+.+||.|.|.++.++ ...+|++||
T Consensus 250 ~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GM 329 (396)
T PLN03158 250 EASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQ 329 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCcccCCCCCCEecCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999887543 457999999
Q ss_pred EEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 302 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 302 vftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
||||||+++.+.....+|+|+||++|.||.+++|||||||||++|+|+||.
T Consensus 330 VfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~ 380 (396)
T PLN03158 330 VFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTA 380 (396)
T ss_pred EEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEeCCcceECCC
Confidence 999999999988888899999999999999999999999999999999996
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.9e-63 Score=456.43 Aligned_cols=244 Identities=45% Similarity=0.789 Sum_probs=234.4
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCC-
Q 018617 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD- 187 (353)
Q Consensus 109 ~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~- 187 (353)
.+|+++||+.||+||+|++++++++.+.++||+|+.||+.++++++.++|++|++++|.+||..+|+|+|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCC-HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCC
Q 018617 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD-DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG 266 (353)
Q Consensus 188 ~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~-~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~ 266 (353)
+++|++||+|+||+|+.++||++|+++||.||+.+ +..++|.+++++|++++|+.+|||++++||+++|+++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 67899999999999999999999999999999766 57777999999999999999999999999999999999999999
Q ss_pred cccceeeeccCCccccCccccccCCCC-CceecCCcEEEEccccccCCCCCcccC-CCceeeeeCCceEEEEEEEEEEeC
Q 018617 267 VVRQFVGHGIGRVFHADPVVLHYRNND-HGRMVLNQTFTIEPMLTIGSINPVMWD-DNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 267 ~~~~~~GHgIG~~~he~P~i~~~~~~~-~~~L~~GmvftIEP~i~~~~~~~~~~~-d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
+++.++|||||..+|+.|.|+||.+.. ..+|++||||+|||+++.++.....+. |+||++|.||+.++||||||+||+
T Consensus 164 vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~ 243 (255)
T COG0024 164 VVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTE 243 (255)
T ss_pred EeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeC
Confidence 999999999999999999999976543 469999999999999999999999888 999999999999999999999999
Q ss_pred CCeEeCCC
Q 018617 345 DGAEILTQ 352 (353)
Q Consensus 345 ~G~eiLT~ 352 (353)
+|+|+||.
T Consensus 244 ~g~eilT~ 251 (255)
T COG0024 244 DGCEILTL 251 (255)
T ss_pred CCcEEeeC
Confidence 99999995
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=6.7e-58 Score=426.22 Aligned_cols=246 Identities=36% Similarity=0.613 Sum_probs=233.3
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCC
Q 018617 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (353)
Q Consensus 108 r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~ 187 (353)
..|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.....+|.+||.++|+|.|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 46999999999999999999999999999999999999999999999999998766667789999999999999999999
Q ss_pred CCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCc
Q 018617 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 267 (353)
Q Consensus 188 ~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~ 267 (353)
+++|++||+|.+|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.||..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccceeeeccCCccccCccccccC-CCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCC
Q 018617 268 VRQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDG 346 (353)
Q Consensus 268 ~~~~~GHgIG~~~he~P~i~~~~-~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G 346 (353)
.++++|||||+.+||.|.+.++. .+++.+|++||||||||+++.+......+.|+|++.|.||..++|+||||+||++|
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G 241 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDG 241 (248)
T ss_pred CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCc
Confidence 88999999999999999987543 34567899999999999999988888888999999999999999999999999999
Q ss_pred eEeCCCC
Q 018617 347 AEILTQC 353 (353)
Q Consensus 347 ~eiLT~~ 353 (353)
+|+||++
T Consensus 242 ~e~lt~~ 248 (248)
T PRK12897 242 PIILTKL 248 (248)
T ss_pred cEEeecC
Confidence 9999974
No 5
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2e-57 Score=429.82 Aligned_cols=245 Identities=31% Similarity=0.546 Sum_probs=229.2
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCC----CCCCCeeeecCCCcccc
Q 018617 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECICH 183 (353)
Q Consensus 108 r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~----~~fp~~v~~g~n~~~~H 183 (353)
+.|||++||+.||+|++|++++++++.+.++||+||.||++.++..+.+.|+.++.+++ .+||+++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 57999999999999999999999999999999999999999999999999998877765 45999999999999999
Q ss_pred CCCCCCcCCCCCeeEEEEee---------------------------eeCcEEeceeeEEEccCCCHHHHHHHHHHHHHH
Q 018617 184 GIPDSRALEDGDTINIDVTV---------------------------YLNGYHGDTSATFFCGDVDDEARNLVKVTKDCL 236 (353)
Q Consensus 184 ~~p~~r~L~~GDiv~iD~g~---------------------------~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~ 236 (353)
+.|++++|++||+|+||+++ .|+||++|++|||++|+++++++++++++++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeeccCCccccCccccccC-CCCCceecCCcEEEEccccccCCCC
Q 018617 237 HKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSIN 315 (353)
Q Consensus 237 ~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~-~~~~~~L~~GmvftIEP~i~~~~~~ 315 (353)
+++++.+|||++++||+++++++++++||..+.+++|||||+.+||.|.+.++. .+.+.+|++||||+|||++|.+...
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~ 241 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWE 241 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcc
Confidence 999999999999999999999999999999888999999999999999987652 3466799999999999999987654
Q ss_pred Cc-ccCCCceeeeeCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 316 PV-MWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 316 ~~-~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
.. .++|+||+++.||+.++|+||||+||++|+|+||.
T Consensus 242 ~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~ 279 (286)
T PRK07281 242 IDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTS 279 (286)
T ss_pred eecccCCCceEEecCCCcEEEeccEEEEeCCcceECCC
Confidence 43 35899999999999999999999999999999996
No 6
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.3e-56 Score=426.12 Aligned_cols=246 Identities=40% Similarity=0.713 Sum_probs=230.8
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCeeeecCCCccccCC
Q 018617 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGI 185 (353)
Q Consensus 108 r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~--~fp~~v~~g~n~~~~H~~ 185 (353)
+.|||++||+.||+|++|++++++++.+.++||+||.||++.+++.+.+.|+.|+.++|. +||+++|+|.|+.++|+.
T Consensus 41 i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~ 120 (291)
T PRK12318 41 IIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGI 120 (291)
T ss_pred eEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCC
Confidence 369999999999999999999999999999999999999999999999999988877775 599999999999999999
Q ss_pred CCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCC
Q 018617 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 265 (353)
Q Consensus 186 p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~ 265 (353)
|++++|++||+|.+|+++.++||++|++|||++|+++++++++++++.++++++++.+|||++++||+++++++++++|+
T Consensus 121 p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~ 200 (291)
T PRK12318 121 PNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGF 200 (291)
T ss_pred CCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccceeeeccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCccc-CCCceeeeeCCceEEEEEEEEEEeC
Q 018617 266 GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMW-DDNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 266 ~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~-~d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
....+++|||||+.+||.|.|.++.++++.+|++||||+|||++|.+....+.+ .|+|++.+.||..++|+||||+||+
T Consensus 201 ~~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv~VTe 280 (291)
T PRK12318 201 SVVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTILITE 280 (291)
T ss_pred ccCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEEEEcC
Confidence 977889999999999999999776556678999999999999999876554433 5899999999999999999999999
Q ss_pred CCeEeCCCC
Q 018617 345 DGAEILTQC 353 (353)
Q Consensus 345 ~G~eiLT~~ 353 (353)
+|+|+||.+
T Consensus 281 ~G~e~LT~~ 289 (291)
T PRK12318 281 TGYEILTLL 289 (291)
T ss_pred CcceeCCCC
Confidence 999999974
No 7
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=9.4e-56 Score=412.72 Aligned_cols=247 Identities=45% Similarity=0.800 Sum_probs=233.3
Q ss_pred CCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCC
Q 018617 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (353)
Q Consensus 106 ~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~ 185 (353)
+.+.|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+++..+.+||..+|+|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 34679999999999999999999999999999999999999999999999999998877788899999999999999999
Q ss_pred CCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCC
Q 018617 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 265 (353)
Q Consensus 186 p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~ 265 (353)
|++++|++||+|++|+++.++||++|++|||++|+++++++++++++.++++++++.+|||++++||++++++++++.|+
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccceeeeccCCccccCcccc-cc-CCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEe
Q 018617 266 GVVRQFVGHGIGRVFHADPVVL-HY-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 343 (353)
Q Consensus 266 ~~~~~~~GHgIG~~~he~P~i~-~~-~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT 343 (353)
....+++|||||+.+||.|.+. ++ ..+++.+|++||||+|||+++.+..+...|+|+|++.+.+|.+++|+||||+||
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt 245 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVT 245 (255)
T ss_pred EeccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEc
Confidence 8778999999999999999543 22 234568999999999999999999888899999999999999999999999999
Q ss_pred CCCeEeCCC
Q 018617 344 RDGAEILTQ 352 (353)
Q Consensus 344 ~~G~eiLT~ 352 (353)
++|+|+||.
T Consensus 246 ~~G~e~Lt~ 254 (255)
T PRK12896 246 RDGPEILTD 254 (255)
T ss_pred CCcceecCC
Confidence 999999996
No 8
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=3.2e-55 Score=407.61 Aligned_cols=244 Identities=48% Similarity=0.792 Sum_probs=231.7
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCC
Q 018617 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188 (353)
Q Consensus 109 ~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~ 188 (353)
.|||++||++||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+...++.+||.++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999988777777899999999999999999999
Q ss_pred CcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcc
Q 018617 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV 268 (353)
Q Consensus 189 r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~ 268 (353)
++|++||+|.+|+++.|+||++|++|||++|++++++++++++++++++++++.+|||++++||+++++++++++|+...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cceeeeccCCccccCccccccC-CCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCe
Q 018617 269 RQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 347 (353)
Q Consensus 269 ~~~~GHgIG~~~he~P~i~~~~-~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~ 347 (353)
.+++|||||+.+||.|.+.++. .+++.+|++||||+|||++|.+......+.++|++..++|..++|+||||+||++|+
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~ 241 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGP 241 (247)
T ss_pred cCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCcc
Confidence 7899999999999999887553 345789999999999999999887777788999999999999999999999999999
Q ss_pred EeCCC
Q 018617 348 EILTQ 352 (353)
Q Consensus 348 eiLT~ 352 (353)
|+||.
T Consensus 242 e~Lt~ 246 (247)
T TIGR00500 242 EILTE 246 (247)
T ss_pred EEccC
Confidence 99995
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=2.4e-54 Score=402.54 Aligned_cols=246 Identities=50% Similarity=0.839 Sum_probs=232.5
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCC
Q 018617 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (353)
Q Consensus 108 r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~ 187 (353)
..|||++||+.||+|+++++++++.+.+.++||+|+.||++.+++.+.++|+.+.+.++.+|+.++++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998776677789989999999999999999
Q ss_pred CCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCc
Q 018617 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 267 (353)
Q Consensus 188 ~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~ 267 (353)
+++|++||+|.+|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++|+..
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~ 162 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV 162 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccceeeeccCCccccCcccccc-CCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCC
Q 018617 268 VRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDG 346 (353)
Q Consensus 268 ~~~~~GHgIG~~~he~P~i~~~-~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G 346 (353)
..+++|||||+.+||.|.+.++ ..+++.+|+|||||+|||+++.+......|+|+|++.+++|..++++||||+||++|
T Consensus 163 ~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G 242 (252)
T PRK05716 163 VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDG 242 (252)
T ss_pred ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCc
Confidence 7789999999999999988654 345678999999999999999988888889999999999999999999999999999
Q ss_pred eEeCCCC
Q 018617 347 AEILTQC 353 (353)
Q Consensus 347 ~eiLT~~ 353 (353)
+|+||..
T Consensus 243 ~e~Lt~~ 249 (252)
T PRK05716 243 PEILTLR 249 (252)
T ss_pred cEEeeCC
Confidence 9999963
No 10
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.3e-50 Score=374.28 Aligned_cols=237 Identities=53% Similarity=0.928 Sum_probs=224.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCC
Q 018617 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (353)
Q Consensus 116 I~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GD 195 (353)
|+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+..+++.+||..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999888778888999999999999999999999999999
Q ss_pred eeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeec
Q 018617 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 275 (353)
Q Consensus 196 iv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHg 275 (353)
+|.+|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998778899999
Q ss_pred cCCccccCccccc-cCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 276 IGRVFHADPVVLH-YRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 276 IG~~~he~P~i~~-~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
||+.+||.|.+.. ...+++.+|++||||+|||++|.+......|+++|+..+.+|..++++||||+||++|+|+||+
T Consensus 161 iG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 161 IGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred CCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 9999999998762 2245678999999999999999988777789999999999999999999999999999999985
No 11
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=3.7e-50 Score=393.34 Aligned_cols=226 Identities=21% Similarity=0.350 Sum_probs=208.6
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccc
Q 018617 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (353)
Q Consensus 103 ~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~ 182 (353)
.+..+|+|||++||++||+|++|++++++.+.+.++||+||.||++.++..+.++|+.+. +|+++|++|.|...+
T Consensus 120 ~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~~~p 194 (361)
T PRK09795 120 TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALP 194 (361)
T ss_pred cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcC-----CCCeEEEEecccccc
Confidence 367789999999999999999999999999999999999999999999999999998763 599999999999999
Q ss_pred cCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccC--CCHH---HHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHH
Q 018617 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD--VDDE---ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (353)
Q Consensus 183 H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~--~~~~---~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~ 257 (353)
|+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|+.+.++++++++++|||++++||+++++
T Consensus 195 h~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~ 274 (361)
T PRK09795 195 HGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAAR 274 (361)
T ss_pred CCCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999963 3433 789999999999999999999999999999999
Q ss_pred HHHHHcCCCc-ccceeeeccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEE
Q 018617 258 DHADRYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQF 336 (353)
Q Consensus 258 ~~~~~~G~~~-~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~ 336 (353)
+++++.||.. +.|.+|||||+.+||.|.+.. +++.+|++||||+|||++|.+ |.+++++
T Consensus 275 ~~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~---~~~~~l~~gmv~~iEpgiy~~-----------------~~~gvri 334 (361)
T PRK09795 275 RVITEAGYGDYFGHNTGHAIGIEVHEDPRFSP---RDTTTLQPGMLLTVEPGIYLP-----------------GQGGVRI 334 (361)
T ss_pred HHHHHcCCCccCCCCCCccCCccccCCCCcCC---CCCCCcCCCCEEEECCEEEeC-----------------CCCEEEE
Confidence 9999999985 578899999999999998753 456899999999999999875 3467999
Q ss_pred EEEEEEeCCCeEeCCCC
Q 018617 337 EHTILITRDGAEILTQC 353 (353)
Q Consensus 337 EdtvlIT~~G~eiLT~~ 353 (353)
||||+||++|+|+||++
T Consensus 335 Ed~v~vt~~G~e~Lt~~ 351 (361)
T PRK09795 335 EDVVLVTPQGAEVLYAM 351 (361)
T ss_pred eeEEEECCCCcEeCcCC
Confidence 99999999999999974
No 12
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-48 Score=382.68 Aligned_cols=227 Identities=27% Similarity=0.411 Sum_probs=212.1
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc
Q 018617 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (353)
Q Consensus 101 ~~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~ 180 (353)
...+..+|.|||+.||+.||+|+++++.++..+.+.++||+||.||.+.++..+.++|+... +|+++|++|.|.+
T Consensus 145 ~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~-----sf~~iv~~G~n~a 219 (384)
T COG0006 145 SDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGP-----SFDTIVASGENAA 219 (384)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcc-----CcCcEEecccccc
Confidence 34566789999999999999999999999999999999999999999999999999997642 4999999999999
Q ss_pred cccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHH
Q 018617 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 260 (353)
Q Consensus 181 ~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~ 260 (353)
.+|+.|+++.+++||+|+||+|+.|+|||+|+||||.+|+++++++++|+.++++++++++++|||+++++|+.++++.+
T Consensus 220 ~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i 299 (384)
T COG0006 220 LPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVL 299 (384)
T ss_pred CcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCc-ccceeeeccC--CccccCcc-ccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEE
Q 018617 261 DRYNYGV-VRQFVGHGIG--RVFHADPV-VLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQF 336 (353)
Q Consensus 261 ~~~G~~~-~~~~~GHgIG--~~~he~P~-i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~ 336 (353)
.+.|+.. +.|.+|||+| +.+||.|. +. .+...+|+||||||+||++|.+ |..|+++
T Consensus 300 ~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~---~~~~~~L~~GMv~t~Epg~y~~-----------------g~~GirI 359 (384)
T COG0006 300 EKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS---PGSDTTLEPGMVFSIEPGIYIP-----------------GGGGVRI 359 (384)
T ss_pred HhcCCcccccCCccccCCCCcccCcCccccC---CCCCccccCCcEEEeccccccC-----------------CCceEEE
Confidence 9988875 5677999999 99999994 43 3467899999999999999875 6789999
Q ss_pred EEEEEEeCCCeEeCCC
Q 018617 337 EHTILITRDGAEILTQ 352 (353)
Q Consensus 337 EdtvlIT~~G~eiLT~ 352 (353)
||+|+||++|+|+||.
T Consensus 360 Ed~vlVte~G~e~LT~ 375 (384)
T COG0006 360 EDTVLVTEDGFEVLTR 375 (384)
T ss_pred EEEEEEcCCCceeccc
Confidence 9999999999999994
No 13
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=6.5e-48 Score=385.64 Aligned_cols=234 Identities=21% Similarity=0.287 Sum_probs=207.0
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccc
Q 018617 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (353)
Q Consensus 103 ~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~ 182 (353)
.+.++|.|||++||+.||+|++++++++.++.+.++||+||.||++.+...+.++|+... +|+++|++|.|.+.+
T Consensus 166 ~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~-----~~~~iv~~G~na~~~ 240 (438)
T PRK10879 166 WVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYP-----SYNTIVGSGENGCIL 240 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCC-----CCCcEEEEcCccccc
Confidence 345689999999999999999999999999999999999999999999999999998532 488999999999999
Q ss_pred cCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHH
Q 018617 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD 261 (353)
Q Consensus 183 H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~ 261 (353)
|+.|++++|++||+|++|+|+.++||++|++|||+| |+++++++++|++++++++++++++|||+++++|++++.+++.
T Consensus 241 H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~ 320 (438)
T PRK10879 241 HYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMV 320 (438)
T ss_pred cCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 8999999999999999999999999999999999999886643
Q ss_pred ------------------HcCCCc-ccceeeeccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCC
Q 018617 262 ------------------RYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDN 322 (353)
Q Consensus 262 ------------------~~G~~~-~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~ 322 (353)
+.++.. +.|.+||+||+++|+.|.+. .+.+.+|++||||||||++|.+..
T Consensus 321 ~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~---~~~~~~L~~GmV~tvEPgiY~~~~-------- 389 (438)
T PRK10879 321 SGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG---QDRSRILEPGMVLTVEPGLYIAPD-------- 389 (438)
T ss_pred HHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC---CCCCCcCCCCCEEEECCEEEECCC--------
Confidence 334432 57889999999999988653 345679999999999999998532
Q ss_pred ceeeeeCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 323 WTIVTEDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 323 wt~~t~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
|++.....+.|+|+||||+||++|+|+||.
T Consensus 390 ~~~~~~~~~~GiRiED~VlVT~~G~e~LT~ 419 (438)
T PRK10879 390 ADVPEQYRGIGIRIEDDIVITETGNENLTA 419 (438)
T ss_pred cCcccccCccEEEeccEEEECCCcCeEcCc
Confidence 222333355799999999999999999995
No 14
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.1e-47 Score=356.02 Aligned_cols=223 Identities=25% Similarity=0.313 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCC
Q 018617 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (353)
Q Consensus 116 I~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GD 195 (353)
|++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+ +|+.++++|.|...+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999883 3888999999999999999999999999
Q ss_pred eeEEEEeeeeCcEEeceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCC---------
Q 018617 196 TINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY--------- 265 (353)
Q Consensus 196 iv~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~--------- 265 (353)
+|++|+++.|+||++|++|||++ |++++++++++++++++++++++++|||++++||++++++++++.|+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 68999999999999999999999999999999999999999986532
Q ss_pred ----------CcccceeeeccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEE
Q 018617 266 ----------GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQ 335 (353)
Q Consensus 266 ----------~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~ 335 (353)
..+.|.+|||||+.+||.|.+.. ..+++.+|++||||+|||++|.++..... ++.| +..++|
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~-~~~~~~~l~~GMv~~iEp~iy~~~~~~~~-~~~~------~~~g~~ 226 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLR-YLRRARPLEPGMVITIEPGIYFIPDLLDV-PEYF------RGGGIR 226 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccc-cCCCCCCCCCCCEEEECCEEEeCCccccc-cccc------ceeEEE
Confidence 23567799999999999997621 23466899999999999999987533221 3333 568999
Q ss_pred EEEEEEEeCCCeEeCCC
Q 018617 336 FEHTILITRDGAEILTQ 352 (353)
Q Consensus 336 ~EdtvlIT~~G~eiLT~ 352 (353)
+||||+||++|+|+||+
T Consensus 227 ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 227 IEDDVLVTEDGPENLTR 243 (243)
T ss_pred eeeEEEEcCCcceeCcC
Confidence 99999999999999995
No 15
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=2e-47 Score=351.51 Aligned_cols=224 Identities=18% Similarity=0.215 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCeeeecCCCccccCCCCCCcCCCC
Q 018617 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 194 (353)
Q Consensus 116 I~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~-l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~G 194 (353)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+...+ ..+.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 1222334678999999999999999999999
Q ss_pred CeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcc-cceee
Q 018617 195 DTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV-RQFVG 273 (353)
Q Consensus 195 Div~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~-~~~~G 273 (353)
|+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++||... .+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 56699
Q ss_pred eccCCccccCccc--cccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCeEeCC
Q 018617 274 HGIGRVFHADPVV--LHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILT 351 (353)
Q Consensus 274 HgIG~~~he~P~i--~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~eiLT 351 (353)
||||+..||.|.- .....+.+.+|+|||||+|||++|.+. ++ +|..++++||||+||++|+|+||
T Consensus 161 HgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~--------~~-----~g~gG~ried~v~Vt~~G~e~Lt 227 (228)
T cd01090 161 HSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPE--------GQ-----PGAGGYREHDILVINENGAENIT 227 (228)
T ss_pred cccccccccCCCccccccCCCCCCccCCCCEEEECCEEeecc--------cC-----CCCcEEEeeeEEEECCCccccCc
Confidence 9999999997631 112234568999999999999998742 11 24578999999999999999998
Q ss_pred C
Q 018617 352 Q 352 (353)
Q Consensus 352 ~ 352 (353)
.
T Consensus 228 ~ 228 (228)
T cd01090 228 G 228 (228)
T ss_pred C
Confidence 4
No 16
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=1.8e-47 Score=368.84 Aligned_cols=227 Identities=20% Similarity=0.287 Sum_probs=203.0
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc
Q 018617 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (353)
Q Consensus 101 ~~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~ 180 (353)
.+.+.++|.|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.+.|... +..| .++.+|.+ .
T Consensus 86 ~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~~-~ 159 (323)
T PRK15173 86 SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD-F 159 (323)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECCC-C
Confidence 3456788999999999999999999999999999999999999999999998888876532 1123 35667776 5
Q ss_pred cccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHH
Q 018617 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 260 (353)
Q Consensus 181 ~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~ 260 (353)
.+|+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++
T Consensus 160 ~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~ 239 (323)
T PRK15173 160 SPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVI 239 (323)
T ss_pred ccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCc-ccceeeeccCC--ccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEE
Q 018617 261 DRYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFE 337 (353)
Q Consensus 261 ~~~G~~~-~~~~~GHgIG~--~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~E 337 (353)
++.|+.. ..+++|||||+ .+||.|.+.. +++.+|++||||+|||++|.. |..++++|
T Consensus 240 ~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~---~~~~~Le~GMV~tiEPgiy~~-----------------g~ggvriE 299 (323)
T PRK15173 240 KKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSIMIE 299 (323)
T ss_pred HHcCCccccCCCCCCcCCCCCCcCCCCCCCC---CCCCccCCCCEEEECCEEEcC-----------------CCcEEEEe
Confidence 9999973 56789999996 7899998863 356799999999999999863 34679999
Q ss_pred EEEEEeCCCeEeCCCC
Q 018617 338 HTILITRDGAEILTQC 353 (353)
Q Consensus 338 dtvlIT~~G~eiLT~~ 353 (353)
|||+||++|+|+||++
T Consensus 300 DtvlVTe~G~e~LT~~ 315 (323)
T PRK15173 300 DMILINKEGIEFLSKL 315 (323)
T ss_pred eEEEEcCCcceeCCCC
Confidence 9999999999999964
No 17
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=6.4e-47 Score=375.55 Aligned_cols=227 Identities=20% Similarity=0.276 Sum_probs=204.5
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc
Q 018617 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (353)
Q Consensus 101 ~~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~ 180 (353)
.+.+.++|.|||++||+.||+|+++++++++++.+.++||+||.||++.+++.+.+.|.... ..| +++.+|.+ .
T Consensus 169 ~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~~~-~~v~~G~~-~ 242 (406)
T PRK14575 169 SSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLISVGAD-F 242 (406)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----CcC-ceEEECCC-c
Confidence 44567899999999999999999999999999999999999999999999998888776431 112 46777776 5
Q ss_pred cccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHH
Q 018617 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 260 (353)
Q Consensus 181 ~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~ 260 (353)
.+|+.|++++|++||+|.+|+|+.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++++++
T Consensus 243 ~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~ 322 (406)
T PRK14575 243 SPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVI 322 (406)
T ss_pred ccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCc-ccceeeeccCC--ccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEE
Q 018617 261 DRYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFE 337 (353)
Q Consensus 261 ~~~G~~~-~~~~~GHgIG~--~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~E 337 (353)
++.||.. ..+++|||||. .+||.|.+.. +++.+|++||||+|||++|.. |.+++++|
T Consensus 323 ~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~---~~~~~Le~GMv~tiEpgiy~~-----------------g~gGvriE 382 (406)
T PRK14575 323 KKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSIMIE 382 (406)
T ss_pred HHcCCccccCCCCCCcccCCCCCccCCCCCC---CCCCCcCCCCEEEECCeeecC-----------------CCcEEEEE
Confidence 9999974 46889999995 7899998864 356799999999999999863 34689999
Q ss_pred EEEEEeCCCeEeCCCC
Q 018617 338 HTILITRDGAEILTQC 353 (353)
Q Consensus 338 dtvlIT~~G~eiLT~~ 353 (353)
|||+||++|+|+||++
T Consensus 383 DtvlVT~~G~e~LT~~ 398 (406)
T PRK14575 383 DMILINKEGIEFLSKL 398 (406)
T ss_pred eEEEEcCCCcccCCCC
Confidence 9999999999999964
No 18
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=3.7e-47 Score=375.69 Aligned_cols=226 Identities=18% Similarity=0.227 Sum_probs=199.9
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHH----CCCCCCCCCCCCCCCeeeec
Q 018617 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIID----NGAYPSPLGYGGFPKSVCTS 176 (353)
Q Consensus 101 ~~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~----~G~~ps~l~~~~fp~~v~~g 176 (353)
.+.+.++|+|||++||++||+|++|++++++++.+.++||+||.||++.+.+.... .|+. +..|.+++.+|
T Consensus 149 ~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~~-----~~~~~~iv~sG 223 (391)
T TIGR02993 149 TALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGGD-----YPAIVPLLPSG 223 (391)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCCC-----cCCcccccccC
Confidence 34567889999999999999999999999999999999999999999988655332 1221 22366778899
Q ss_pred CCCccccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHH
Q 018617 177 VNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (353)
Q Consensus 177 ~n~~~~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai 256 (353)
.|...+|+.|++++|++||+|.+|+++.|+||++|++|||++|+++++++++|+.+.++++++++++|||++++||++++
T Consensus 224 ~~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~ 303 (391)
T TIGR02993 224 ADASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAF 303 (391)
T ss_pred ccccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcccceeeeccCCccccC-----ccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCc
Q 018617 257 QDHADRYNYGVVRQFVGHGIGRVFHAD-----PVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGS 331 (353)
Q Consensus 257 ~~~~~~~G~~~~~~~~GHgIG~~~he~-----P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~ 331 (353)
+++++++|+.. .|++|||||+.+|+. |.+. .+++.+|++||||||||++|.+ |
T Consensus 304 ~~~~~~~G~~~-~h~~GhgiGl~~~~~~~e~~~~l~---~~~~~~L~~GMv~tvEpgiy~~-----------------~- 361 (391)
T TIGR02993 304 FAVLKKYGIHK-DSRTGYPIGLSYPPDWGERTMSLR---PGDNTVLKPGMTFHFMTGLWME-----------------D- 361 (391)
T ss_pred HHHHHHcCCcc-CCCceeeeccCcCCCCCCcccccc---CCCCceecCCCEEEEcceeEeC-----------------C-
Confidence 99999999974 588999999998742 3443 3466899999999999999874 2
Q ss_pred eEEEEEEEEEEeCCCeEeCCCC
Q 018617 332 LSAQFEHTILITRDGAEILTQC 353 (353)
Q Consensus 332 ~~~~~EdtvlIT~~G~eiLT~~ 353 (353)
.|+++||||+||++|+|+||.+
T Consensus 362 ~Gvried~v~VT~~G~e~Lt~~ 383 (391)
T TIGR02993 362 WGLEITESILITETGVECLSSV 383 (391)
T ss_pred CCeEEeeEEEECCCcceecccC
Confidence 3689999999999999999974
No 19
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=4.3e-46 Score=369.50 Aligned_cols=226 Identities=21% Similarity=0.254 Sum_probs=204.7
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcc
Q 018617 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (353)
Q Consensus 102 ~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~ 181 (353)
+.+.++|+|||++||+.||+|++++++++..+.+.++||+||.||++.++..+.+.|... +..| +.+++|.| ..
T Consensus 169 ~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~~ 242 (405)
T PRK14576 169 ALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGDN-FS 242 (405)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECCc-cc
Confidence 356788999999999999999999999999999999999999999999999999887531 1123 57888888 56
Q ss_pred ccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHH
Q 018617 182 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD 261 (353)
Q Consensus 182 ~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~ 261 (353)
+|+.|+++++++||+|.+|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||+++++++++
T Consensus 243 ~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~ 322 (405)
T PRK14576 243 PKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIK 322 (405)
T ss_pred CCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCc-ccceeeeccC--CccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEE
Q 018617 262 RYNYGV-VRQFVGHGIG--RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEH 338 (353)
Q Consensus 262 ~~G~~~-~~~~~GHgIG--~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~Ed 338 (353)
++||.. ..+++||||| +.+||.|.+.. +++.+|++||||+|||++|.. |..++++||
T Consensus 323 ~~G~~~~~~~~~GHgiG~~l~~~e~P~i~~---~~~~~Le~GMv~~vEp~~y~~-----------------g~ggvriED 382 (405)
T PRK14576 323 TSGLPHYNRGHLGHGDGVFLGLEEVPFVST---QATETFCPGMVLSLETPYYGI-----------------GVGSIMLED 382 (405)
T ss_pred HcCCccccCCCCCCCCCCCCCcCcCCCcCC---CCCCccCCCCEEEECCceeec-----------------CCCEEEEee
Confidence 999974 4578999999 78899998742 456799999999999998763 457899999
Q ss_pred EEEEeCCCeEeCCCC
Q 018617 339 TILITRDGAEILTQC 353 (353)
Q Consensus 339 tvlIT~~G~eiLT~~ 353 (353)
||+||++|+|+||++
T Consensus 383 tvlVTe~G~e~LT~~ 397 (405)
T PRK14576 383 MILITDSGFEFLSKL 397 (405)
T ss_pred EEEECCCccccCCCC
Confidence 999999999999974
No 20
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=9.2e-45 Score=356.51 Aligned_cols=244 Identities=20% Similarity=0.346 Sum_probs=215.6
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCeeeecCCCcccc
Q 018617 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL----GYGGFPKSVCTSVNECICH 183 (353)
Q Consensus 108 r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l----~~~~fp~~v~~g~n~~~~H 183 (353)
-.+|+++||+.||+|++|++++++.+.+.++||+|+.||++.+++++.++++. ... ++.+|+..+|+|+|+++||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 36999999999999999999999999999999999999999999999987653 221 2345555567789999999
Q ss_pred CCC--C--CCcCCCCCeeEEEEeeeeCcEEeceeeEEEccC-----CCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHH
Q 018617 184 GIP--D--SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 254 (353)
Q Consensus 184 ~~p--~--~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~-----~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ 254 (353)
++| + +++|++||+|+||+|++++||++|++|||+||+ ++++++++++++++|++++++.+|||++++||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 488999999999999999999999999999995 5678999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcccceeeeccCCcccc-Cccc-cccCC-----CCCceecCCcEEEEccccccCCCCCcccCCCce---
Q 018617 255 TIQDHADRYNYGVVRQFVGHGIGRVFHA-DPVV-LHYRN-----NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWT--- 324 (353)
Q Consensus 255 ai~~~~~~~G~~~~~~~~GHgIG~~~he-~P~i-~~~~~-----~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt--- 324 (353)
+++++++++||.++++++||+||..+|+ .|.| .++.. .....|++||||+|||+++.|++....++|.||
T Consensus 170 ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~ 249 (389)
T TIGR00495 170 AINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYK 249 (389)
T ss_pred HHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEE
Confidence 9999999999999999999999999997 7875 54432 235689999999999999999887776666665
Q ss_pred -----------------------------------------------------------eeeeCCceEEEEEEEEEEeCC
Q 018617 325 -----------------------------------------------------------IVTEDGSLSAQFEHTILITRD 345 (353)
Q Consensus 325 -----------------------------------------------------------~~t~dg~~~~~~EdtvlIT~~ 345 (353)
+..++|.+.+||||||+|+++
T Consensus 250 ~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~ 329 (389)
T TIGR00495 250 RDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPN 329 (389)
T ss_pred ECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCC
Confidence 255778999999999999999
Q ss_pred CeEeCCC
Q 018617 346 GAEILTQ 352 (353)
Q Consensus 346 G~eiLT~ 352 (353)
|+++||.
T Consensus 330 g~~~~t~ 336 (389)
T TIGR00495 330 GPMRITS 336 (389)
T ss_pred CcEEeCC
Confidence 9999996
No 21
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=7.4e-44 Score=321.72 Aligned_cols=207 Identities=29% Similarity=0.500 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCC
Q 018617 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (353)
Q Consensus 116 I~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GD 195 (353)
|++||+|++++++++.++.+.++||+||.||++.+++.+.++|+++. +|++++++|.|...+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~-----~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGP-----SFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC-----CCCcEEEECccccccCCCCCCcCcCCCC
Confidence 68999999999999999999999999999999999999999998742 4899999999999999999999999999
Q ss_pred eeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCc-ccceeee
Q 018617 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGH 274 (353)
Q Consensus 196 iv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~-~~~~~GH 274 (353)
+|++|+++.++||++|++||+++|+++++++++++.+.++++.+++.+|||++++||+++++++++++|+.. +.+.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 4677999
Q ss_pred ccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCe
Q 018617 275 GIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 347 (353)
Q Consensus 275 gIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~ 347 (353)
+||+.+||.|.|. .+++.+|++||||+|||+++.+ +.+++++||||+||++|+
T Consensus 156 ~iG~~~~e~p~i~---~~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 156 GVGLEVHEAPYIS---PGSDDVLEEGMVFTIEPGIYIP-----------------GKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred ccCcccCcCCCcC---CCCCCCcCCCCEEEECCeEEec-----------------CCCEEEeeeEEEECCCCC
Confidence 9999999999875 3467899999999999999763 446899999999999995
No 22
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=2.2e-44 Score=359.92 Aligned_cols=244 Identities=16% Similarity=0.197 Sum_probs=196.4
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCcc
Q 018617 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (353)
Q Consensus 102 ~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~ 181 (353)
+.+.++|+|||++||++||+|+++++++++.+.+.++||+||.||++.+.... ..++.. .+|+++|++|.|+++
T Consensus 153 ~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~ 226 (443)
T PRK13607 153 DYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAV 226 (443)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceE
Confidence 34567899999999999999999999999999999999999999998654332 223221 248999999999999
Q ss_pred ccCCCCCC-cCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHH
Q 018617 182 CHGIPDSR-ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 260 (353)
Q Consensus 182 ~H~~p~~r-~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~ 260 (353)
+|+.|+++ ++++||+|++|+|+.++||++|++|||+ |+++++++++|+++.+|++++++++|||++++||+.++.+++
T Consensus 227 ~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i 305 (443)
T PRK13607 227 LHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRI 305 (443)
T ss_pred ecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 99999875 6899999999999999999999999999 889999999999999999999999999999999999988665
Q ss_pred ----HHcCCC----------------cccceeeeccCCccccCcccccc-------------CCCCCceecCCcEEEEcc
Q 018617 261 ----DRYNYG----------------VVRQFVGHGIGRVFHADPVVLHY-------------RNNDHGRMVLNQTFTIEP 307 (353)
Q Consensus 261 ----~~~G~~----------------~~~~~~GHgIG~~~he~P~i~~~-------------~~~~~~~L~~GmvftIEP 307 (353)
.+.|+. .++|.+||+||+++||.+.+... .-....+|++||||||||
T Consensus 306 ~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEP 385 (443)
T PRK13607 306 AKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEP 385 (443)
T ss_pred HHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEECC
Confidence 445443 25788999999999997533110 002347899999999999
Q ss_pred ccccCCCCCcccCC-------Cceeee-eCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 308 MLTIGSINPVMWDD-------NWTIVT-EDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 308 ~i~~~~~~~~~~~d-------~wt~~t-~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
++|........|.. .|..+. -.+.+|+|+||+|+||++|+|+||+
T Consensus 386 GiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 386 GLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred eeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 99986421111111 111110 0134589999999999999999995
No 23
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.5e-42 Score=329.98 Aligned_cols=227 Identities=31% Similarity=0.569 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCC---CCcC
Q 018617 115 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (353)
Q Consensus 115 EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~---~r~L 191 (353)
+|++||+|++|++++++.+.+.++||+|+.||++.+++.+.++|+.++ ||+.+ +.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998775 88654 578889999986 6889
Q ss_pred CCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccce
Q 018617 192 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF 271 (353)
Q Consensus 192 ~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~ 271 (353)
++||+|++|+|+.++||++|++||+++| ++++++++++.+|++++++.+|||++++||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred eeeccCC-ccccCccccccCCCCCceecCCcEEEEccccccCCCCCc---------------------------------
Q 018617 272 VGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV--------------------------------- 317 (353)
Q Consensus 272 ~GHgIG~-~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~--------------------------------- 317 (353)
+|||||+ .+|+.|.|++...+++.+|++||||+|||+++.|.+...
T Consensus 150 ~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~~~~~ 229 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIEEEYN 229 (291)
T ss_pred cccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHHHHCC
Confidence 9999997 789999988766667889999999999999988876321
Q ss_pred ------ccC-CC-------------------ce-eeeeCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 318 ------MWD-DN-------------------WT-IVTEDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 318 ------~~~-d~-------------------wt-~~t~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
.|- |. +. .+.++|++.+||||||+||++|++++|+
T Consensus 230 ~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 230 TLPFAERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred CCCcchHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 010 11 11 2667899999999999999999999985
No 24
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=7.4e-43 Score=320.27 Aligned_cols=208 Identities=15% Similarity=0.138 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCC--CcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCC---CCcCC
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pG--vTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~---~r~L~ 192 (353)
.||.+..+ .++++.+.+.++|| +||.||++.+++++...|.++. .+||++||+|.|++++|+.|+ +++|+
T Consensus 6 ~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l~ 80 (224)
T cd01085 6 HIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKIS 80 (224)
T ss_pred HHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCcccC
Confidence 45665555 58999999999999 9999999999988877765432 249999999999999999998 99999
Q ss_pred CCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcHhHHHHHHHHHHHHcCCCcccce
Q 018617 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVC-APGMEYKKIGKTIQDHADRYNYGVVRQF 271 (353)
Q Consensus 193 ~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~-kpG~~~~dI~~ai~~~~~~~G~~~~~~~ 271 (353)
+||+|++|+++.++||++|++|||++|+++++++++++.+++++.++++.+ +||+++++|.+++++.+.+.|+. +.|+
T Consensus 81 ~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h~ 159 (224)
T cd01085 81 PDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGHG 159 (224)
T ss_pred CCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999999999999999999999999988 59999999999999999999986 5678
Q ss_pred eeeccC--CccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCeEe
Q 018617 272 VGHGIG--RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEI 349 (353)
Q Consensus 272 ~GHgIG--~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~ei 349 (353)
+||||| +.+||.|.+. +..+++.+|++||||||||++|.+ |..++++||||+||++|+.-
T Consensus 160 ~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~-----------------g~~gvried~v~Vt~~G~~~ 221 (224)
T cd01085 160 TGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKE-----------------GKYGIRIENLVLVVEAETTE 221 (224)
T ss_pred CCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeC-----------------CCeEEEeeEEEEEeeCCcCC
Confidence 999999 5789999874 223456899999999999999874 55789999999999999854
No 25
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=1.9e-42 Score=343.04 Aligned_cols=237 Identities=26% Similarity=0.388 Sum_probs=205.5
Q ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHC----CCCCCCCCCCCCCCeeeecCCCccc
Q 018617 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECIC 182 (353)
Q Consensus 107 ~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~----G~~ps~l~~~~fp~~v~~g~n~~~~ 182 (353)
.+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..+++.+.+. |+... .+||+ |+|.|++.+
T Consensus 149 ~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g----~aFPt--~vS~N~~aa 222 (470)
T PTZ00053 149 ELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCG----WAFPT--GCSLNHCAA 222 (470)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCccc----CCCCc--eeecCcccc
Confidence 345689999999999999999999999999999999999999888866544 55322 35988 568999999
Q ss_pred cCCCC---CCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHH
Q 018617 183 HGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH 259 (353)
Q Consensus 183 H~~p~---~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~ 259 (353)
|++|+ +++|++||+|+||+|++++||++|++|||++| ++++++++++++|++++|++++||++++||+++++++
T Consensus 223 H~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqev 299 (470)
T PTZ00053 223 HYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEV 299 (470)
T ss_pred CCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99995 78999999999999999999999999999997 6889999999999999999999999999999999999
Q ss_pred HHHcCCC---------cccceeeeccCC-ccccCccccccCCCCCceecCCcEEEEccccccCCCCCc------------
Q 018617 260 ADRYNYG---------VVRQFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV------------ 317 (353)
Q Consensus 260 ~~~~G~~---------~~~~~~GHgIG~-~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~------------ 317 (353)
++++||. ++.+++|||||+ .+|+.|.++.+.+++..+|++||||+|||+++.|.+.+.
T Consensus 300 ies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~ 379 (470)
T PTZ00053 300 IESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDP 379 (470)
T ss_pred HHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcC
Confidence 9999974 468999999998 899988877766667789999999999999998876321
Q ss_pred ------------------------------ccCCC---------------------ce-eeeeCCceEEEEEEEEEEeCC
Q 018617 318 ------------------------------MWDDN---------------------WT-IVTEDGSLSAQFEHTILITRD 345 (353)
Q Consensus 318 ------------------------------~~~d~---------------------wt-~~t~dg~~~~~~EdtvlIT~~ 345 (353)
.|-+. +. ++.++|++.+||||||+++++
T Consensus 380 ~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~ 459 (470)
T PTZ00053 380 GAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLLALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPT 459 (470)
T ss_pred cCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHHHHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCC
Confidence 11111 00 255779999999999999999
Q ss_pred CeEeCCC
Q 018617 346 GAEILTQ 352 (353)
Q Consensus 346 G~eiLT~ 352 (353)
|.|++|+
T Consensus 460 ~~~vis~ 466 (470)
T PTZ00053 460 CKEVLSR 466 (470)
T ss_pred CCEecCC
Confidence 9999996
No 26
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=2.2e-41 Score=322.45 Aligned_cols=229 Identities=30% Similarity=0.491 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCC---CC
Q 018617 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 189 (353)
Q Consensus 113 ~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~---~r 189 (353)
-+||+.||+|++|++++++.+.+.++||+|+.||++.+++.+.++|+.++ ||+.+ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~a------Fp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPA------FPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC------CCcce--ecCCEeeCCCCCCCcCc
Confidence 37899999999999999999999999999999999999999999999864 88865 579999999985 67
Q ss_pred cCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCccc
Q 018617 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR 269 (353)
Q Consensus 190 ~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~ 269 (353)
+|++||+|++|+|+.++||++|++|||++|+ ..+++++++++|++++++.+|||++++||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999986 3689999999999999999999999999999999999999999888
Q ss_pred ceeeeccCC-ccccCccccccCCCCCceecCCcEEEEccccccCCCCCc-------------------------------
Q 018617 270 QFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV------------------------------- 317 (353)
Q Consensus 270 ~~~GHgIG~-~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~------------------------------- 317 (353)
+++|||||. ..|+.+.|++..+..+.+|++||||+|||+++.+.+...
T Consensus 151 ~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~~~ 230 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTIDEN 230 (295)
T ss_pred CCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHHHH
Confidence 999999995 778887766555556789999999999999887765321
Q ss_pred --------ccCCC---------------------ce-eeeeCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 318 --------MWDDN---------------------WT-IVTEDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 318 --------~~~d~---------------------wt-~~t~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
.|-+. +. ...++|++.+||||||+|+++|++++|.
T Consensus 231 ~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 231 YGTLPFARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred CCCCCcchhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 11110 11 2567899999999999999999999985
No 27
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2e-41 Score=322.29 Aligned_cols=226 Identities=32% Similarity=0.563 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCC---CCcCC
Q 018617 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (353)
Q Consensus 116 I~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~---~r~L~ 192 (353)
++.||+|+++++++++++.+.++||+|+.||++.+++.+.++|+.++ ||. ++|.|++.+|+.|+ +++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999998764 875 46899999999986 48999
Q ss_pred CCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCccccee
Q 018617 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFV 272 (353)
Q Consensus 193 ~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~ 272 (353)
+||+|++|+|+.++||++|++||+.+|+ .++++++++++|++++++.+|||++++||+++++++++++|+..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999986 7889999999999999999999999999999999999999999888999
Q ss_pred eeccCC-ccccCccccccCCCCCceecCCcEEEEccccccCCCCCc----------------------------------
Q 018617 273 GHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPV---------------------------------- 317 (353)
Q Consensus 273 GHgIG~-~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~---------------------------------- 317 (353)
|||||. .+|+.|.|+++...++.+|++||||+|||+++.+.+...
T Consensus 150 GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~~~~~~ 229 (291)
T cd01088 150 GHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIYENFGT 229 (291)
T ss_pred ccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999995 789998887766666789999999999999988776421
Q ss_pred -----ccCCC---------------------ce-eeeeCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 318 -----MWDDN---------------------WT-IVTEDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 318 -----~~~d~---------------------wt-~~t~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
.|-+. +. .+.++|++.+||||||+||++|++++|+
T Consensus 230 ~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 230 LPFARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred CCcChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 11111 11 2668899999999999999999999985
No 28
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.1e-41 Score=308.02 Aligned_cols=204 Identities=30% Similarity=0.492 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCC
Q 018617 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (353)
Q Consensus 117 ~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~-i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GD 195 (353)
|+||+|+++++++++++.+.++||+||.||++.+.+. +.++|... .+|++++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56677543 24889999999999999999999999999
Q ss_pred eeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCC-Ccccceeee
Q 018617 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 274 (353)
Q Consensus 196 iv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~-~~~~~~~GH 274 (353)
+|.+|+++.|+||++|++||+++| ++++++++++.++++++.+++.+|||++++||++++.+.++++|+ ..+.+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 557889999
Q ss_pred ccCCccccC-ccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeC
Q 018617 275 GIGRVFHAD-PVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 275 gIG~~~he~-P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
+||+.+|+. |.|.. .+++.+|++||||+|||+++.. + +..++++||||+||+
T Consensus 155 ~iG~~~~~~~P~i~~--~~~~~~l~~gmv~~iep~~~~~--------~--------~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 155 GIGLEFHEPGPNIAR--PGDDTVLEPGMVFAIEPGLYFI--------P--------GWGGVRFEDTVLVTE 207 (207)
T ss_dssp EESSSSSEEEEEESS--TTTSSB--TTBEEEEEEEEEEE--------T--------TSEEEEEBEEEEEES
T ss_pred cccccccccceeeec--ccccceecCCCceeEeeeEEcc--------C--------CCcEEEEEEEEEECc
Confidence 999999997 98753 3467899999999999998632 2 336899999999996
No 29
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=8.7e-41 Score=307.42 Aligned_cols=216 Identities=24% Similarity=0.392 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCC--CCCC-CCCCCCCCCeeeecCCCccccCCC----CC
Q 018617 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PLGYGGFPKSVCTSVNECICHGIP----DS 188 (353)
Q Consensus 116 I~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G--~~ps-~l~~~~fp~~v~~g~n~~~~H~~p----~~ 188 (353)
+++||+|++|++++++.+.+.++||+||.||+..+++.+.+.. .++. ..++.+++...|++.|+..+|+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 3689999999999999999999999999999988888887742 2322 122333333345567999999996 78
Q ss_pred CcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCH-----HHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHc
Q 018617 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-----EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY 263 (353)
Q Consensus 189 r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~-----~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~ 263 (353)
++|++||+|++|+|+.|+||++|++|||++|++++ +++++++++.++++++++.+|||++++||+++++++++++
T Consensus 81 ~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~ 160 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY 160 (228)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999875 8999999999999999999999999999999999999999
Q ss_pred CCCcccceeeeccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEe
Q 018617 264 NYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 343 (353)
Q Consensus 264 G~~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT 343 (353)
||.++..+++|++|..++-.|.-. .-...|++||||++||.++.+ |.+++++||||+||
T Consensus 161 G~~~~~~~~~h~~g~~~~~~~~~~----~~~~~l~~gmvf~~ep~~~~~-----------------g~~~~~~~~Tv~vt 219 (228)
T cd01089 161 GCTPVEGVLSHQLKRVVSSGEGKA----KLVECVKHGLLFPYPVLYEKE-----------------GEVVAQFKLTVLLT 219 (228)
T ss_pred CCEEecCccccCcCceEecCCCCc----cchhhccCCcccccceeEccC-----------------CCeEEEEEEEEEEc
Confidence 998888899888887433222100 124579999999999999763 67899999999999
Q ss_pred CCCeEeCCC
Q 018617 344 RDGAEILTQ 352 (353)
Q Consensus 344 ~~G~eiLT~ 352 (353)
++|+|.||.
T Consensus 220 ~~G~e~lt~ 228 (228)
T cd01089 220 PNGVTVLTG 228 (228)
T ss_pred CCCCeeCCC
Confidence 999999984
No 30
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.1e-40 Score=298.22 Aligned_cols=206 Identities=28% Similarity=0.501 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCC
Q 018617 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (353)
Q Consensus 116 I~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GD 195 (353)
|+.||+|+++++++++.+.+.++||+||.||.+.+++.+.++|++++ |+.++.+|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~------~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYPA------GPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC------CCcEEEECccccCcCCCCCCCCcCCCC
Confidence 57899999999999999999999999999999999999999999443 778888888889999999999999999
Q ss_pred eeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCC-Ccccceeee
Q 018617 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 274 (353)
Q Consensus 196 iv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~-~~~~~~~GH 274 (353)
+|++|+++.++||++|++|||++|+++++++++++.+.++++.+++.+|||++++||+++++++++++|+ ....+++||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 456889999
Q ss_pred ccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCCCe
Q 018617 275 GIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 347 (353)
Q Consensus 275 gIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~G~ 347 (353)
+||+.+|+.|.+. .+.+.+|++||+|+|||.++.+ +..++++|||++||++|+
T Consensus 155 ~iG~~~~e~~~~~---~~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 155 GIGLEIHEPPVLK---AGDDTVLEPGMVFAVEPGLYLP-----------------GGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred ccCcccCCCCCcC---CCCCCCcCCCCEEEECCEEEEC-----------------CCcEEEeeeEEEEeCCCC
Confidence 9999999999853 3456799999999999999874 347899999999999985
No 31
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=7.1e-41 Score=310.58 Aligned_cols=225 Identities=16% Similarity=0.237 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----hcCCC--CcHHHHHHHHHHHHHHCCCC-----CCCCCCCCCCCeeeecCCC-ccc
Q 018617 116 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAY-----PSPLGYGGFPKSVCTSVNE-CIC 182 (353)
Q Consensus 116 I~~mR~A~~ia~~~l~~~~~-----~i~pG--vTe~ei~~~v~~~i~~~G~~-----ps~l~~~~fp~~v~~g~n~-~~~ 182 (353)
++.||+|++++..+|..... .|.+| +|+.+|+..+++.+.+.+.. |..+. .+|++++++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976555 89999 99999999999999988744 21112 3599999999999 899
Q ss_pred cCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHH
Q 018617 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 262 (353)
Q Consensus 183 H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~ 262 (353)
|+.++++.++.||+|.+|+|++|+|||+|++|||++| ++++++++|++++++++++++++|||++++||++++.+++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred cCCCc---ccceeeeccCCccccCccccccCCCCCceecCCcEEEEcccccc-CCCCCcccCCCceeeeeCCceEEEEEE
Q 018617 263 YNYGV---VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTI-GSINPVMWDDNWTIVTEDGSLSAQFEH 338 (353)
Q Consensus 263 ~G~~~---~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~-~~~~~~~~~d~wt~~t~dg~~~~~~Ed 338 (353)
.|... +.+.+|||||+++||.|.+.. ..++.+|++||||+|||+++. +... .+.+ +++.+++++||
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~~~~--~~~~------~~~~~gv~ieD 228 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQNPE--PKDK------ESKTYALLLSD 228 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCccccC--CCCCCCcCCCCEEEEeCCcccccCcc--ccCc------cCCeeEEEEEE
Confidence 87543 345699999999999886543 234679999999999999983 2110 0111 23568999999
Q ss_pred EEEEeCCCe-EeCCC
Q 018617 339 TILITRDGA-EILTQ 352 (353)
Q Consensus 339 tvlIT~~G~-eiLT~ 352 (353)
||+||++|+ |+||.
T Consensus 229 tV~Vt~~G~~~~LT~ 243 (243)
T cd01091 229 TILVTEDEPAIVLTN 243 (243)
T ss_pred EEEEcCCCCceecCC
Confidence 999999999 99985
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-39 Score=306.09 Aligned_cols=232 Identities=20% Similarity=0.251 Sum_probs=207.9
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccc
Q 018617 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (353)
Q Consensus 103 ~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~ 182 (353)
.+.++|.||||+|+++||+||.|+.+++-..+-.-|+...|..|++.++..++.+|+.-. .||+.|+.|.|....
T Consensus 221 li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~~-----AYpPVVAgG~na~tI 295 (488)
T KOG2414|consen 221 LIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADRL-----AYPPVVAGGKNANTI 295 (488)
T ss_pred HHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCcccc-----ccCCeeecCcccceE
Confidence 456789999999999999999999999999999999999999999999999999999754 599999999999999
Q ss_pred cCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCC--CCcHhHHHHHHHHH
Q 018617 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAP--GMEYKKIGKTIQDH 259 (353)
Q Consensus 183 H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~l~~~~~~~~~~ai~~~kp--G~~~~dI~~ai~~~ 259 (353)
|+.-++..|.++|+|.+|.|+.++||++|++|||.+ |..++.|++||+++.+.++..|+.|+| |.++.+|+....+.
T Consensus 296 HY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~L 375 (488)
T KOG2414|consen 296 HYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNEL 375 (488)
T ss_pred EEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999999999 99999999776554
Q ss_pred H----HHcCC------------CcccceeeeccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCc
Q 018617 260 A----DRYNY------------GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNW 323 (353)
Q Consensus 260 ~----~~~G~------------~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~w 323 (353)
+ ++.|. ..++|.+||-+|+++|+.|.+. .+..|+|||||||||++|.|... .|+..
T Consensus 376 l~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~-----r~~pL~pg~ViTIEPGvYIP~d~--d~P~~- 447 (488)
T KOG2414|consen 376 LGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVS-----RDIPLQPGMVITIEPGVYIPEDD--DPPEE- 447 (488)
T ss_pred HHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCC-----CCccCCCCceEEecCceecCccC--CCchH-
Confidence 4 44453 2468999999999999999986 34689999999999999998532 12222
Q ss_pred eeeeeCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 324 TIVTEDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 324 t~~t~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
-.+.|+|+||.|+|++||.|+||.
T Consensus 448 -----FrGIGiRIEDDV~i~edg~evLT~ 471 (488)
T KOG2414|consen 448 -----FRGIGIRIEDDVAIGEDGPEVLTA 471 (488)
T ss_pred -----hcCceEEeecceEeccCCceeehh
Confidence 257899999999999999999995
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=2.2e-34 Score=270.89 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=203.3
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc
Q 018617 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180 (353)
Q Consensus 101 ~~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~ 180 (353)
.|.+.+.|.|||+.||+.||.|++|+++++.++++.++||+.|.++...+......+|+-.. .+|.+++|+|.|..
T Consensus 176 yp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~ 251 (492)
T KOG2737|consen 176 YPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSA 251 (492)
T ss_pred hHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcc
Confidence 55778899999999999999999999999999999999999999999999999999887432 35889999999999
Q ss_pred cccC----CCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHH
Q 018617 181 ICHG----IPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKT 255 (353)
Q Consensus 181 ~~H~----~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~a 255 (353)
+.|+ .|+++.+|+||.+.+|+|+.|.+|.+|++++|.. |+.+++|+.+|+++..++.++++++|||+...|++..
T Consensus 252 vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~L 331 (492)
T KOG2737|consen 252 VLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKL 331 (492)
T ss_pred eeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHH
Confidence 9998 8999999999999999999999999999999999 9999999999999999999999999999999999876
Q ss_pred HHHHH----HHcCC---------------CcccceeeeccCCccccCc-cccccC-CC--------CCceecCCcEEEEc
Q 018617 256 IQDHA----DRYNY---------------GVVRQFVGHGIGRVFHADP-VVLHYR-NN--------DHGRMVLNQTFTIE 306 (353)
Q Consensus 256 i~~~~----~~~G~---------------~~~~~~~GHgIG~~~he~P-~i~~~~-~~--------~~~~L~~GmvftIE 306 (353)
..+++ ++.|. ...+|-.||-||+++|+-. +...+. ++ ..+.|++|||+|+|
T Consensus 332 a~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvE 411 (492)
T KOG2737|consen 332 AEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVE 411 (492)
T ss_pred HHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEec
Confidence 66544 44443 1257889999999999641 111111 11 23589999999999
Q ss_pred cccccCCCCCc-ccCCCcee-------ee-eCCceEEEEEEEEEEeCCCeEeCCC
Q 018617 307 PMLTIGSINPV-MWDDNWTI-------VT-EDGSLSAQFEHTILITRDGAEILTQ 352 (353)
Q Consensus 307 P~i~~~~~~~~-~~~d~wt~-------~t-~dg~~~~~~EdtvlIT~~G~eiLT~ 352 (353)
|+.|.-..... -..|.-++ .. -.+..|+|+||.|+||++|+|.||.
T Consensus 412 PGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~ 466 (492)
T KOG2737|consen 412 PGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC 466 (492)
T ss_pred CChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccC
Confidence 99986432110 00010000 00 0256789999999999999999984
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.90 E-value=3.2e-23 Score=208.81 Aligned_cols=237 Identities=18% Similarity=0.275 Sum_probs=192.6
Q ss_pred CCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHH-----hhhcCCC--CcHHHHHHHHHHHHHHC----CCCCCCCCCC
Q 018617 99 QKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYA-----GTLVKPG--ITTDEIDKAVHQMIIDN----GAYPSPLGYG 167 (353)
Q Consensus 99 ~~~~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~-----~~~i~pG--vTe~ei~~~v~~~i~~~----G~~ps~l~~~ 167 (353)
++.-.+..+.+||++.||+.+|+|++++..+|... ...+-.| +|...+...+...|.+. |..|..+. .
T Consensus 126 Dis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d-~ 204 (960)
T KOG1189|consen 126 DISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLD-M 204 (960)
T ss_pred ehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccc-c
Confidence 33344677889999999999999999999999843 3344444 67788888888887664 33342233 3
Q ss_pred CCCCeeeecCCCcc-ccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 018617 168 GFPKSVCTSVNECI-CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPG 246 (353)
Q Consensus 168 ~fp~~v~~g~n~~~-~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG 246 (353)
.||+++.+|.+-.+ .....+++.| + +|...+|++|++||+.++|||+| +|+.++++.|+..+.+|++++..||||
T Consensus 205 cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il~~lrpG 280 (960)
T KOG1189|consen 205 CYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEILKLLRPG 280 (960)
T ss_pred ccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 59999999988554 3345677888 4 99999999999999999999999 889999999999999999999999999
Q ss_pred CcHhHHHHHHHHHHHHcCCCcccce---eeeccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCc
Q 018617 247 MEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNW 323 (353)
Q Consensus 247 ~~~~dI~~ai~~~~~~~G~~~~~~~---~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~w 323 (353)
+..++||.++.+++++.+....+.| .|.|||++|.|..++.+.. ++.+|++||||.|..++..-.. +
T Consensus 281 ~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~inaK--nd~~lk~gmvFni~lGf~nl~n-----~--- 350 (960)
T KOG1189|consen 281 TKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINAK--NDRVLKKGMVFNISLGFSNLTN-----P--- 350 (960)
T ss_pred CchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeeccccccccc--chhhhccCcEEEEeeccccccC-----c---
Confidence 9999999999999999998876655 8999999999998876543 4589999999999888754321 0
Q ss_pred eeeeeCCceEEEEEEEEEEeCCCe-EeCCCC
Q 018617 324 TIVTEDGSLSAQFEHTILITRDGA-EILTQC 353 (353)
Q Consensus 324 t~~t~dg~~~~~~EdtvlIT~~G~-eiLT~~ 353 (353)
...+.++..+.|||+|+++++ ++||.+
T Consensus 351 ---~~~~~yaL~l~DTvlv~e~~p~~vLT~~ 378 (960)
T KOG1189|consen 351 ---ESKNSYALLLSDTVLVGEDPPAEVLTDS 378 (960)
T ss_pred ---ccccchhhhccceeeecCCCcchhhccc
Confidence 112458899999999999997 999964
No 35
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.90 E-value=5.6e-23 Score=204.45 Aligned_cols=227 Identities=16% Similarity=0.209 Sum_probs=189.6
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHH----hhhcCCC--CcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeee
Q 018617 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYA----GTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC 174 (353)
Q Consensus 101 ~~~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~----~~~i~pG--vTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~ 174 (353)
.+.+..++++|+++|++.||.|----..|+.+. .+.+.-| +||.+++..++++-..+..+.. .+|+++.+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~ 373 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISS 373 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeec
Confidence 334455678999999999998865555555444 3445567 8999999999998887766543 25999986
Q ss_pred e-cCCCccccCCCC---CCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcH
Q 018617 175 T-SVNECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAP-GMEY 249 (353)
Q Consensus 175 ~-g~n~~~~H~~p~---~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kp-G~~~ 249 (353)
+ |+|.++.|+.|. ++.+.+..+.++|-|++|.-=.+|++||+.+|+|+++.++.|..+.+.+-+...+.-| |...
T Consensus 374 s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g 453 (606)
T KOG2413|consen 374 SVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKG 453 (606)
T ss_pred cCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCc
Confidence 6 999999999986 4689999999999999998889999999999999999999999999999888886654 7888
Q ss_pred hHHHHHHHHHHHHcCCCcccceeeeccCC--ccccCccccccCC-CCCceecCCcEEEEccccccCCCCCcccCCCceee
Q 018617 250 KKIGKTIQDHADRYNYGVVRQFVGHGIGR--VFHADPVVLHYRN-NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIV 326 (353)
Q Consensus 250 ~dI~~ai~~~~~~~G~~~~~~~~GHgIG~--~~he~P~i~~~~~-~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~ 326 (353)
..+...++..+.+.|.. +.|-+|||||. .+||.|....++. ++...|++||++++||+.|.
T Consensus 454 ~~lD~laR~~LW~~gLD-y~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~--------------- 517 (606)
T KOG2413|consen 454 SVLDALARSALWKAGLD-YGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK--------------- 517 (606)
T ss_pred chhHHHHHHHHHhhccc-cCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccc---------------
Confidence 99999999999999987 68899999998 5799997665552 45578999999999999987
Q ss_pred eeCCceEEEEEEEEEEeCCCeEe
Q 018617 327 TEDGSLSAQFEHTILITRDGAEI 349 (353)
Q Consensus 327 t~dg~~~~~~EdtvlIT~~G~ei 349 (353)
||.+|+|+|+.++|.+.+...
T Consensus 518 --dg~fGIRienv~~vvd~~~~~ 538 (606)
T KOG2413|consen 518 --DGEFGIRIENVVEVVDAGTKH 538 (606)
T ss_pred --cCcceEEEeeEEEEEeccccc
Confidence 478999999999998776543
No 36
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.88 E-value=7.6e-22 Score=181.39 Aligned_cols=233 Identities=25% Similarity=0.428 Sum_probs=191.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHH----HHCCCCCCCCCCCCCCCeeeecCCCccccCCC
Q 018617 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (353)
Q Consensus 111 Ks~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i----~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p 186 (353)
-..+...-+|+|+++.+++-.++...|+||||..||+..++... .+.|.... .+||+. .|.|.|..|+.|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG----i~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG----IGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc----ccCCCc--ccccchhhhcCC
Confidence 45566788999999999999999999999999999999987643 34444322 358875 578999999998
Q ss_pred C---CCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHc
Q 018617 187 D---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY 263 (353)
Q Consensus 187 ~---~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~ 263 (353)
+ ..+|+.+|+.+||+|.+.+|-..|++.|+.+ ++....|+.+++++...+|+...-.++.+||+++|+++++++
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSy 230 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESY 230 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhhe
Confidence 6 4689999999999999999999999999998 456778999999999999999999999999999999999996
Q ss_pred CCC---------cccceeeeccCCc-cccCccccccCCCCCceecCCcEEEEccccccCCCCC-----------------
Q 018617 264 NYG---------VVRQFVGHGIGRV-FHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINP----------------- 316 (353)
Q Consensus 264 G~~---------~~~~~~GHgIG~~-~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~----------------- 316 (353)
-.. +++++.||+|+.. +|....++...+++.+.|++|..|+||..-+.|.+.+
T Consensus 231 EvEi~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETFgSTGkG~v~ddmecSHymkn~~~~~ 310 (397)
T KOG2775|consen 231 EVEINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMKNFELGH 310 (397)
T ss_pred EEEeCCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEeeccCCcceecCCcccchhhhhccccc
Confidence 432 3678999999985 6877666655667888999999999999887776521
Q ss_pred -------------------------cccCCCc----------------------eeeeeCCceEEEEEEEEEEeCCCeEe
Q 018617 317 -------------------------VMWDDNW----------------------TIVTEDGSLSAQFEHTILITRDGAEI 349 (353)
Q Consensus 317 -------------------------~~~~d~w----------------------t~~t~dg~~~~~~EdtvlIT~~G~ei 349 (353)
..|-|.. .+...+|.+.+||||||+..+.+-|+
T Consensus 311 vplrl~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTIll~pt~KEV 390 (397)
T KOG2775|consen 311 VPLRLQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTILLSPTGKEV 390 (397)
T ss_pred cccccHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceeeEecchhcch
Confidence 1121111 02345699999999999999999999
Q ss_pred CCC
Q 018617 350 LTQ 352 (353)
Q Consensus 350 LT~ 352 (353)
+|+
T Consensus 391 vsr 393 (397)
T KOG2775|consen 391 VSR 393 (397)
T ss_pred hcc
Confidence 985
No 37
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.81 E-value=1.7e-18 Score=162.96 Aligned_cols=243 Identities=21% Similarity=0.394 Sum_probs=191.8
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCC--CCCC-CCC--CCCCCCeeeecCCCccc
Q 018617 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PLG--YGGFPKSVCTSVNECIC 182 (353)
Q Consensus 108 r~vKs~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G--~~ps-~l~--~~~fp~~v~~g~n~~~~ 182 (353)
..|-++..+..||-|++|+.+++..+.+.++||.+..||+.....++.+.- .|.. .-. .-.||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 357788999999999999999999999999999999999999888886652 2322 111 124776 677999999
Q ss_pred cCCCC----CCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCC-----HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHH
Q 018617 183 HGIPD----SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD-----DEARNLVKVTKDCLHKAISVCAPGMEYKKIG 253 (353)
Q Consensus 183 H~~p~----~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~-----~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~ 253 (353)
|+.|- +..|++||+|.||+|++++||.+-+++|++|+.++ ....+++.++..|.++++..++||.+-..|.
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 99872 67899999999999999999999999999998644 5677899999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcccceeeeccCCccc-cCccccccCC------CCCceecCCcEEEEccccccCCCCCcccCCC----
Q 018617 254 KTIQDHADRYNYGVVRQFVGHGIGRVFH-ADPVVLHYRN------NDHGRMVLNQTFTIEPMLTIGSINPVMWDDN---- 322 (353)
Q Consensus 254 ~ai~~~~~~~G~~~~~~~~GHgIG~~~h-e~P~i~~~~~------~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~---- 322 (353)
++|.+.+.++++..+.....|-.=..+- ..+.|..... .+...++++.|+++....+.+.......++-
T Consensus 171 ~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~~K~~~~~~~t~ 250 (398)
T KOG2776|consen 171 RAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGSPKEGDDRAPTI 250 (398)
T ss_pred HHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCccccccccccee
Confidence 9999999999998777777776665443 3355432211 1345789999999987777665522111100
Q ss_pred ----------------------------------------------------------ce-eeeeCCceEEEEEEEEEEe
Q 018617 323 ----------------------------------------------------------WT-IVTEDGSLSAQFEHTILIT 343 (353)
Q Consensus 323 ----------------------------------------------------------wt-~~t~dg~~~~~~EdtvlIT 343 (353)
+. ...++|...+||+.|||..
T Consensus 251 y~kd~~~~y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~Tvllm 330 (398)
T KOG2776|consen 251 YYKDESVSYMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKFTVLLM 330 (398)
T ss_pred EEeccchHHHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheeeEEEec
Confidence 11 2457789999999999999
Q ss_pred CCCeEeCCC
Q 018617 344 RDGAEILTQ 352 (353)
Q Consensus 344 ~~G~eiLT~ 352 (353)
++|.-.||.
T Consensus 331 Png~~~l~~ 339 (398)
T KOG2776|consen 331 PNGSLRLTG 339 (398)
T ss_pred cCCCccccC
Confidence 999888874
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.68 E-value=4.4e-16 Score=155.03 Aligned_cols=236 Identities=15% Similarity=0.146 Sum_probs=175.5
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhh---cCCC---CcHHHHHHHHHHHHHHCCC------CCCCCCC----
Q 018617 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTL---VKPG---ITTDEIDKAVHQMIIDNGA------YPSPLGY---- 166 (353)
Q Consensus 103 ~~~~~r~vKs~~EI~~mR~A~~ia~~~l~~~~~~---i~pG---vTe~ei~~~v~~~i~~~G~------~ps~l~~---- 166 (353)
.+..+-.+|+.+||+.+|.+++.....|....+. +..| +|...+...+...+-+... .-+.+++
T Consensus 163 gLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~~~d~le 242 (1001)
T COG5406 163 GLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDIDLDQLE 242 (1001)
T ss_pred hhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccccchhhhh
Confidence 3455678999999999999999999999855332 2222 4555555555443322111 0000000
Q ss_pred CCCCCeeeecCCCcc-ccCCCCCCcCCCCCeeEEEEeeeeCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 018617 167 GGFPKSVCTSVNECI-CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAP 245 (353)
Q Consensus 167 ~~fp~~v~~g~n~~~-~H~~p~~r~L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kp 245 (353)
-.|.+++.+|..--+ +.....++.|. ||+|...+|.+|+|||+.++||+++ +|+.++++-|+.++.+|...+..|||
T Consensus 243 w~ytpiiqsg~~~Dl~psa~s~~~~l~-gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i~~~~rp 320 (1001)
T COG5406 243 WCYTPIIQSGGSIDLTPSAFSFPMELT-GDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYILGLVRP 320 (1001)
T ss_pred hhcchhhccCceeecccccccCchhhc-CceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHHHhhcCC
Confidence 126677777765322 33334455565 8999999999999999999999999 88999999999999999999999999
Q ss_pred CCcHhHHHHHHHHHHHHcCCCcccce---eeeccCCccccCccccccCCCCCceecCCcEEEEccccccCCCCCcccCCC
Q 018617 246 GMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDN 322 (353)
Q Consensus 246 G~~~~dI~~ai~~~~~~~G~~~~~~~---~GHgIG~~~he~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~ 322 (353)
|+..++|+..+.+++.+.|....++| +|-+||+.+.+.-.+.+.. ++++|+.||+|.|..+...- .+.
T Consensus 321 G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvk--n~r~lq~g~~fnis~gf~nl-------~~~ 391 (1001)
T COG5406 321 GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVK--NGRVLQAGCIFNISLGFGNL-------INP 391 (1001)
T ss_pred CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceecc--CCceeccccEEEEeeccccc-------CCC
Confidence 99999999999999999999887877 7999999999887666554 34899999999998766431 111
Q ss_pred ceeeeeCCceEEEEEEEEEEeCCCeEeCCCC
Q 018617 323 WTIVTEDGSLSAQFEHTILITRDGAEILTQC 353 (353)
Q Consensus 323 wt~~t~dg~~~~~~EdtvlIT~~G~eiLT~~ 353 (353)
- ..+.++.++-||+-|+-+-+.++|.+
T Consensus 392 ~----~~Nnyal~l~dt~qi~ls~p~~~t~~ 418 (1001)
T COG5406 392 H----PKNNYALLLIDTEQISLSNPIVFTDS 418 (1001)
T ss_pred C----cccchhhhhccceEeecCCceecccC
Confidence 0 11447888999999988888888853
No 39
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.47 E-value=0.0013 Score=60.47 Aligned_cols=103 Identities=12% Similarity=0.168 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCccc-ceeeeccCCccccCccccccCCCCCceecCCc
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR-QFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 301 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~-~~~GHgIG~~~he~P~i~~~~~~~~~~L~~Gm 301 (353)
+.++++.+.+.++++++++.++||++-.||..++.+.+.++|..... .+.++...........+.|+. ..+.+|++|+
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~-~~~~~l~~Gd 80 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGI-PDDRVLKDGD 80 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCC-CCCcccCCCC
Confidence 35789999999999999999999999999999999999999975211 001110000000011123322 2357899999
Q ss_pred EEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeC
Q 018617 302 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 302 vftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
++.++.+... +++.+.+..|+.|.+
T Consensus 81 ~v~id~g~~~------------------~GY~ad~~RT~~~G~ 105 (238)
T cd01086 81 IVNIDVGVEL------------------DGYHGDSARTFIVGE 105 (238)
T ss_pred EEEEEEEEEE------------------CCEEEEEEEEEECCC
Confidence 9999998754 346779999999865
No 40
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.44 E-value=0.0021 Score=56.78 Aligned_cols=102 Identities=21% Similarity=0.260 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCe
Q 018617 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (353)
Q Consensus 117 ~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDi 196 (353)
+.++++.+.+.++++.+.+.++||++..||...+++.+.++|.........| ..+.....+...-...++.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~G--h~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTG--HGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCc--cccCcccCCCCCcCCCCCCCcCCCCE
Confidence 5788899999999999999999999999999999999999987421111111 11111111111101124678999999
Q ss_pred eEEEEeeeeC-cEEeceeeEEEccC
Q 018617 197 INIDVTVYLN-GYHGDTSATFFCGD 220 (353)
Q Consensus 197 v~iD~g~~~~-GY~~D~sRT~~vG~ 220 (353)
+.++.+.+.. ++..-+..|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999877 58888899999854
No 41
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.41 E-value=0.0013 Score=65.54 Aligned_cols=116 Identities=9% Similarity=0.129 Sum_probs=81.8
Q ss_pred EEeceeeEEEccCCC--HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCccc-ceeeec--cCCcccc
Q 018617 208 YHGDTSATFFCGDVD--DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR-QFVGHG--IGRVFHA 282 (353)
Q Consensus 208 Y~~D~sRT~~vG~~~--~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~-~~~GHg--IG~~~he 282 (353)
.+.+..++..|..+. +.++++.+.+.++++++.+.++||++-.||.+++++.+.++|..... ++.+.. +....
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~-- 204 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSV-- 204 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecc--
Confidence 456777888887655 56788999999999999999999999999999999998887743211 111111 11111
Q ss_pred CccccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeC
Q 018617 283 DPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 283 ~P~i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
...+.|... ++.+|++|+++.|+.+.+. +++.+-+..|++|.+
T Consensus 205 N~~i~Hgip-~~r~L~~GDiV~iDvg~~~------------------~GY~aD~tRT~~VG~ 247 (396)
T PLN03158 205 NEVICHGIP-DARKLEDGDIVNVDVTVYY------------------KGCHGDLNETFFVGN 247 (396)
T ss_pred cccccCCCC-CCccCCCCCEEEEEEeEEE------------------CCEEEeEEeEEEcCC
Confidence 112334322 4568999999999998865 236678899999864
No 42
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.16 E-value=0.0051 Score=55.01 Aligned_cols=99 Identities=21% Similarity=0.282 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCC--CccccCCC-CCCcCCC
Q 018617 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN--ECICHGIP-DSRALED 193 (353)
Q Consensus 117 ~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n--~~~~H~~p-~~r~L~~ 193 (353)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.++|..+......|+ .+|.. +. +.-.+ ++++|++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh----~iG~~~~e~-p~i~~~~~~~l~~ 177 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH----GVGLEVHEA-PYISPGSDDVLEE 177 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc----ccCcccCcC-CCcCCCCCCCcCC
Confidence 35678888999999999999999999999999999999999974321111111 12211 10 11112 4688999
Q ss_pred CCeeEEEEeeeeCcE-EeceeeEEEccC
Q 018617 194 GDTINIDVTVYLNGY-HGDTSATFFCGD 220 (353)
Q Consensus 194 GDiv~iD~g~~~~GY-~~D~sRT~~vG~ 220 (353)
|.++.|+.+.+..|+ -.-+..|++|.+
T Consensus 178 gmv~~iep~~~~~~~~g~~~ed~v~vt~ 205 (208)
T cd01092 178 GMVFTIEPGIYIPGKGGVRIEDDVLVTE 205 (208)
T ss_pred CCEEEECCeEEecCCCEEEeeeEEEECC
Confidence 999999998876554 334678888743
No 43
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.11 E-value=0.0043 Score=59.30 Aligned_cols=97 Identities=13% Similarity=0.198 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeeccCCccccCccccccCC--CCCceecCC
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLN 300 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~--~~~~~L~~G 300 (353)
+.++++.+.+.++++++++.++||++..||.+.+++.+.+.|.. . +++++....+ .+.|+.+ +++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~--~---afp~~is~n~--~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAG--P---AFPVNLSINE--CAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC--C---CCCceeccCC--EeeCCCCCCCCCcccCCC
Confidence 35788999999999999999999999999999999999999854 1 2223333222 2334432 245789999
Q ss_pred cEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeC
Q 018617 301 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 301 mvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
+++.|+.+... .++.+-+..|+.+.+
T Consensus 75 DvV~iD~G~~~------------------dGY~sD~arT~~vg~ 100 (291)
T cd01088 75 DVVKLDFGAHV------------------DGYIADSAFTVDFDP 100 (291)
T ss_pred CEEEEEEEEEE------------------CCEEEEEEEEEecCh
Confidence 99999998754 235566777877653
No 44
>PRK05716 methionine aminopeptidase; Validated
Probab=97.03 E-value=0.0073 Score=56.02 Aligned_cols=100 Identities=18% Similarity=0.193 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCC--ccccC-C-CCCCcCCC
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHG-I-PDSRALED 193 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~--~~~H~-~-p~~r~L~~ 193 (353)
..|++...+.++.+.+.+.++||++-.||.+.+++.+.++|..+. ..+.|+. +.....+ .+.++ . .++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGHG--IGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCccccc--cCCccCCCCccCcCCCCCCCCEecC
Confidence 356677788888899999999999999999999999999987542 2222222 1111111 11111 1 24678999
Q ss_pred CCeeEEEEeeee------------------CcEEeceeeEEEccC
Q 018617 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (353)
Q Consensus 194 GDiv~iD~g~~~------------------~GY~~D~sRT~~vG~ 220 (353)
|.++.|+.+++. +++-.-+..|++|.+
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 999999988864 335566778888854
No 45
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.93 E-value=0.0071 Score=56.21 Aligned_cols=111 Identities=10% Similarity=0.083 Sum_probs=75.2
Q ss_pred eeEEEccCCCH--HHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccc-eeeec--cCCccccCcccc
Q 018617 213 SATFFCGDVDD--EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ-FVGHG--IGRVFHADPVVL 287 (353)
Q Consensus 213 sRT~~vG~~~~--~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~-~~GHg--IG~~~he~P~i~ 287 (353)
.|++.|-.+.+ ..+++.+.+.+++.++.+.++||++-.||...+...+.+.|...... ..+.+ +.... ...+.
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--n~~~~ 82 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISV--NEEVA 82 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecC--CCeeE
Confidence 57777755433 46788888899999999999999999999999999999998752111 01110 11111 11123
Q ss_pred ccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeC
Q 018617 288 HYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 288 ~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
|+.+ .+.+|++|.++.++.+... +++.+.+..|+++.+
T Consensus 83 h~~p-~~~~l~~Gd~v~iD~g~~~------------------~gY~aD~~RT~~vG~ 120 (255)
T PRK12896 83 HGIP-GPRVIKDGDLVNIDVSAYL------------------DGYHGDTGITFAVGP 120 (255)
T ss_pred ecCC-CCccCCCCCEEEEEEeEEE------------------CcEEEeeEEEEECCC
Confidence 3322 3468999999999988754 246677788888753
No 46
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.87 E-value=0.015 Score=53.93 Aligned_cols=100 Identities=19% Similarity=0.112 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc--cccCC--CCCCcCCC
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI--PDSRALED 193 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~--~~H~~--p~~r~L~~ 193 (353)
.+|++...+.++++.+.+.++||+|-.||...+++.+.+.|..+. ..+.|+ .+.....+. +..+. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 356777788888999999999999999999999999999987542 122222 222222111 11111 13678999
Q ss_pred CCeeEEEEeeee------------------CcEEeceeeEEEccC
Q 018617 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (353)
Q Consensus 194 GDiv~iD~g~~~------------------~GY~~D~sRT~~vG~ 220 (353)
|.++.|+.+.+. +++-.-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999988875 234555777888844
No 47
>PRK15173 peptidase; Provisional
Probab=96.78 E-value=0.015 Score=56.36 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCC-CCCCcCCCCCe
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI-PDSRALEDGDT 196 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~-p~~r~L~~GDi 196 (353)
..|++..++.++.+.+.+.++||++-.||...+.+.+.+.|.......+.|+...+..|..+. +.-. .++.+|++|-+
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~-P~i~~~~~~~Le~GMV 281 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEES-PFVSTHATESFTSGMV 281 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCC-CCCCCCCCCccCCCCE
Confidence 457788888899999999999999999999999999999986432111111111111122221 1111 24678999999
Q ss_pred eEEEEeeeeCc-EEeceeeEEEccC
Q 018617 197 INIDVTVYLNG-YHGDTSATFFCGD 220 (353)
Q Consensus 197 v~iD~g~~~~G-Y~~D~sRT~~vG~ 220 (353)
+.|+.+.+..| +-.-+..|++|.+
T Consensus 282 ~tiEPgiy~~g~ggvriEDtvlVTe 306 (323)
T PRK15173 282 LSLETPYYGYNLGSIMIEDMILINK 306 (323)
T ss_pred EEECCEEEcCCCcEEEEeeEEEEcC
Confidence 99999987544 2346788999843
No 48
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.66 E-value=0.015 Score=53.99 Aligned_cols=99 Identities=17% Similarity=0.187 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCC--ccccCC-C-CCCcCCCC
Q 018617 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGI-P-DSRALEDG 194 (353)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~--~~~H~~-p-~~r~L~~G 194 (353)
.|++.+++..+++.+.+.++||++..|+++.+.+.+.+.|.... .++.|+ .+..+..+ .+.+.. + +..+|++|
T Consensus 119 ~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~G 195 (248)
T PRK12897 119 AEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQEG 195 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCCC
Confidence 56666788889999999999999999999999999999886432 122222 12222211 111211 2 34689999
Q ss_pred CeeEEEEeeee-----------------Cc-EEeceeeEEEccC
Q 018617 195 DTINIDVTVYL-----------------NG-YHGDTSATFFCGD 220 (353)
Q Consensus 195 Div~iD~g~~~-----------------~G-Y~~D~sRT~~vG~ 220 (353)
.++.+.-+.+. +| +..-+..|++|.+
T Consensus 196 mv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 196 MVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 99999988872 34 5667788888854
No 49
>PRK14575 putative peptidase; Provisional
Probab=96.63 E-value=0.021 Score=57.18 Aligned_cols=99 Identities=12% Similarity=0.118 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeee--ecCCCc--cccCCCCCCcCCC
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNEC--ICHGIPDSRALED 193 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~--~g~n~~--~~H~~p~~r~L~~ 193 (353)
..|++.+++.++.+.+.+.++||+|-.||++.+.+.+.+.|.......+.| ..+. .|..+. +.+ -++.+|++
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~G--HGiG~~lg~~e~P~i~~--~~~~~Le~ 361 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLG--HGNGVFLGLEESPFVST--HATESFTS 361 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCC--CcccCCCCCccCCCCCC--CCCCCcCC
Confidence 356777788899999999999999999999999999999886432111111 1122 122211 111 24578999
Q ss_pred CCeeEEEEeeeeCc-EEeceeeEEEccC
Q 018617 194 GDTINIDVTVYLNG-YHGDTSATFFCGD 220 (353)
Q Consensus 194 GDiv~iD~g~~~~G-Y~~D~sRT~~vG~ 220 (353)
|-++.|..+.+..| +-.-+..|++|.+
T Consensus 362 GMv~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 362 GMVLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred CCEEEECCeeecCCCcEEEEEeEEEEcC
Confidence 99999999988654 3356889999954
No 50
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.61 E-value=0.024 Score=52.16 Aligned_cols=100 Identities=15% Similarity=0.145 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccC----C--CCCCcC
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG----I--PDSRAL 191 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~----~--p~~r~L 191 (353)
..|++..++.++++.+.+.++||++-.||++.+.+.+.++|...... .++...+.....+. .|+ + -++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCcc
Confidence 36778888999999999999999999999999999999998643211 11112222222221 111 1 135889
Q ss_pred CCCCeeEEEEeeeeC----cE-EeceeeEEEccC
Q 018617 192 EDGDTINIDVTVYLN----GY-HGDTSATFFCGD 220 (353)
Q Consensus 192 ~~GDiv~iD~g~~~~----GY-~~D~sRT~~vG~ 220 (353)
++|.++.++-+.++. |. ---+..|++|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999998863 22 223788888854
No 51
>PRK14576 putative endopeptidase; Provisional
Probab=96.59 E-value=0.025 Score=56.61 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCC-CCCcCCCCCe
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 196 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p-~~r~L~~GDi 196 (353)
..+++.+++.++.+.+.+.+|||++-.||+..+.+.+.+.|.......+.|+....+.|..+. +.-.+ ++.+|++|-+
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~-P~i~~~~~~~Le~GMv 363 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEV-PFVSTQATETFCPGMV 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcC-CCcCCCCCCccCCCCE
Confidence 466778888999999999999999999999999999999986432212222211111232221 11112 4678999999
Q ss_pred eEEEEeeeeCc-EEeceeeEEEccC
Q 018617 197 INIDVTVYLNG-YHGDTSATFFCGD 220 (353)
Q Consensus 197 v~iD~g~~~~G-Y~~D~sRT~~vG~ 220 (353)
+.++.+.+..| .-.-+..|++|.+
T Consensus 364 ~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 364 LSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred EEECCceeecCCCEEEEeeEEEECC
Confidence 99998776544 2334788999843
No 52
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.51 E-value=0.024 Score=56.36 Aligned_cols=97 Identities=15% Similarity=0.254 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc-ccc----C-CC-CCCc
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC-ICH----G-IP-DSRA 190 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~-~~H----~-~p-~~r~ 190 (353)
.+|++.+++.++.+.+.+.++||+|-.||++.+.+.+.+.|.... ...|++ +|.... ..| . .| ++.+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~Ghg----iGl~~~~~~~e~~~~l~~~~~~~ 344 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYP----IGLSYPPDWGERTMSLRPGDNTV 344 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceee----eccCcCCCCCCccccccCCCCce
Confidence 466788889999999999999999999999999999999886531 122222 222110 001 0 12 3578
Q ss_pred CCCCCeeEEEEeeeeCcEEeceeeEEEccC
Q 018617 191 LEDGDTINIDVTVYLNGYHGDTSATFFCGD 220 (353)
Q Consensus 191 L~~GDiv~iD~g~~~~GY~~D~sRT~~vG~ 220 (353)
|++|-++.|.-+++..|+-.-+..|++|.+
T Consensus 345 L~~GMv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 345 LKPGMTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred ecCCCEEEEcceeEeCCCCeEEeeEEEECC
Confidence 999999999999998877667788999853
No 53
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.50 E-value=0.028 Score=53.73 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCc--cccCCC-CCCcCCCC
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGIP-DSRALEDG 194 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~--~~H~~p-~~r~L~~G 194 (353)
.+|++..++.++++.+.+.++||++..||+..+.+.+.+.|.... ..+.|+. +.....+. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GHg--IGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGHG--VGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccCC--cCccccCCCcccCcCCCCCCEeCCC
Confidence 357788888999999999999999999999999999999886432 1122221 22222111 112112 24679999
Q ss_pred CeeEEEEeeeeCc
Q 018617 195 DTINIDVTVYLNG 207 (353)
Q Consensus 195 Div~iD~g~~~~G 207 (353)
.++.|+-+.+..+
T Consensus 236 MV~~iEP~i~~~~ 248 (291)
T PRK12318 236 MIFTIEPMINVGK 248 (291)
T ss_pred CEEEECCEEEcCC
Confidence 9999998887653
No 54
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.47 E-value=0.024 Score=53.00 Aligned_cols=87 Identities=15% Similarity=0.157 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCc-ccceee--eccCCccccCccccccCCCCCceecC
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG--HGIGRVFHADPVVLHYRNNDHGRMVL 299 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~-~~~~~G--HgIG~~~he~P~i~~~~~~~~~~L~~ 299 (353)
+.++++-+.+.++++.+.+.++||++..||.+.++++++++|.-. ...+.| -.+...+.+ .+.|+-++++.+|++
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe--~v~HgiP~d~~vlk~ 89 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNE--VVAHGIPGDKKVLKE 89 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhh--eeeecCCCCCcccCC
Confidence 345677778889999999999999999999999999999866542 111112 223333322 133444446789999
Q ss_pred CcEEEEcccccc
Q 018617 300 NQTFTIEPMLTI 311 (353)
Q Consensus 300 GmvftIEP~i~~ 311 (353)
|.++.|..++..
T Consensus 90 GDiv~IDvg~~~ 101 (255)
T COG0024 90 GDIVKIDVGAHI 101 (255)
T ss_pred CCEEEEEEEEEE
Confidence 999999998854
No 55
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.39 E-value=0.058 Score=51.51 Aligned_cols=95 Identities=20% Similarity=0.187 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCC--------CCCC
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI--------PDSR 189 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~--------p~~r 189 (353)
..+++.+.+.++++.+.+.++||++..||.+.+++.+.+.|..+. .+..|+ .+|.+ ..|.. .++.
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GH----giG~~--~~he~p~ip~~~~~~~~ 174 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGH----GLERY--ELHAGPSIPNYDEGGGV 174 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCccc----CcCCC--cccCCCccCccCCCCCc
Confidence 456788888889999999999999999999999999999997653 222221 12211 12321 2367
Q ss_pred cCCCCCeeEEEEeee-eCcEEeceeeEEEcc
Q 018617 190 ALEDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (353)
Q Consensus 190 ~L~~GDiv~iD~g~~-~~GY~~D~sRT~~vG 219 (353)
+|++|+++.|+..+. -.|+..|-.+|-+..
T Consensus 175 ~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 175 KLEEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred eeCCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 899999999998765 467777777776663
No 56
>PRK09795 aminopeptidase; Provisional
Probab=96.37 E-value=0.049 Score=53.50 Aligned_cols=102 Identities=17% Similarity=0.218 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCC-----
Q 018617 112 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP----- 186 (353)
Q Consensus 112 s~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p----- 186 (353)
.+++-+.++++.+++.++.+.+.+.++||++-.||++.+++.+.+.|.........|+ .+|.+ .|-.|
T Consensus 235 ~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GH----giGl~---~he~p~i~~~ 307 (361)
T PRK09795 235 VSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGH----AIGIE---VHEDPRFSPR 307 (361)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCc----cCCcc---ccCCCCcCCC
Confidence 3555567888999999999999999999999999999999999998864321111111 12221 12222
Q ss_pred CCCcCCCCCeeEEEEeeeeCcEE-eceeeEEEccC
Q 018617 187 DSRALEDGDTINIDVTVYLNGYH-GDTSATFFCGD 220 (353)
Q Consensus 187 ~~r~L~~GDiv~iD~g~~~~GY~-~D~sRT~~vG~ 220 (353)
++.+|++|-++.|+-+++..|.. .-+..|++|.+
T Consensus 308 ~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~vt~ 342 (361)
T PRK09795 308 DTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTP 342 (361)
T ss_pred CCCCcCCCCEEEECCEEEeCCCCEEEEeeEEEECC
Confidence 36889999999999999876543 45678888843
No 57
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.34 E-value=0.035 Score=51.66 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCe----eeecCCCccccCCC-CCCcC
Q 018617 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKS----VCTSVNECICHGIP-DSRAL 191 (353)
Q Consensus 117 ~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~----v~~g~n~~~~H~~p-~~r~L 191 (353)
+.+|++..++.++.+++.+.++||++-.||...+.+.+.+.|..-.. .|++. +.....+....-.| ++++|
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~----~~~~~~GHgiGle~hE~~~~l~~~~~~~L 194 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEP----NFTKNLGFGIGLEFRESSLIINAKNDRKL 194 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHH----hCcCCcccccCcccccCccccCCCCCCCc
Confidence 35677888889999999999999999999999999999887521110 12222 22222221111112 36889
Q ss_pred CCCCeeEEEEeee-e----------CcEEeceeeEEEccC
Q 018617 192 EDGDTINIDVTVY-L----------NGYHGDTSATFFCGD 220 (353)
Q Consensus 192 ~~GDiv~iD~g~~-~----------~GY~~D~sRT~~vG~ 220 (353)
++|-++.|..|.+ + +.|-.-++.|++|.+
T Consensus 195 ~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 195 KKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 9999999999987 3 257777899999954
No 58
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.28 E-value=0.038 Score=52.73 Aligned_cols=83 Identities=11% Similarity=0.041 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCC--Cc--cccC-CC-CCCcC
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN--EC--ICHG-IP-DSRAL 191 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n--~~--~~H~-~p-~~r~L 191 (353)
..|++.+++.++++.+.+.++||++-.||++.+++.+.++|... ...+.|+ .+|.+ +. +.+. .+ ++.+|
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH----GIGl~~hE~P~i~~~~~~~~~~~L 223 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH----GVGPTMHEEPMVPNYGTAGRGLRL 223 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee----eCCCccCCCCcCCCcccCCCCCEE
Confidence 36788899999999999999999999999999999998887643 1122221 22322 11 1111 12 34679
Q ss_pred CCCCeeEEEEeeee
Q 018617 192 EDGDTINIDVTVYL 205 (353)
Q Consensus 192 ~~GDiv~iD~g~~~ 205 (353)
++|.++.|.-+++.
T Consensus 224 e~GMV~tiEPgiy~ 237 (286)
T PRK07281 224 REGMVLTIEPMINT 237 (286)
T ss_pred CCCCEEEECCeeEc
Confidence 99999999999875
No 59
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.27 E-value=0.046 Score=48.90 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHH-HHHcCCCcccceeeeccCCccccCccccccCCCCCceecCCc
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH-ADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 301 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~-~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~Gm 301 (353)
+..|++-+.+.++++++++.++||++-.||...+.+. +.+.|.....+..-=+.|.. ..+.++.+ ++.+|++|+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~----~~~~~~~~-~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPN----TDLPHYTP-TDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCC----CGETTTBC-CSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCc----ceecceec-cceeeecCC
Confidence 3578899999999999999999999999999999998 67778442111100111211 12233322 467899999
Q ss_pred EEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEE
Q 018617 302 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILI 342 (353)
Q Consensus 302 vftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlI 342 (353)
.+.++-.... +++.+.+..|+++
T Consensus 76 ~v~id~~~~~------------------~gy~~d~~Rt~~~ 98 (207)
T PF00557_consen 76 IVIIDFGPRY------------------DGYHADIARTFVV 98 (207)
T ss_dssp EEEEEEEEEE------------------TTEEEEEEEEEES
T ss_pred cceeecccee------------------eeeEeeeeeEEEE
Confidence 9999987754 2456777888866
No 60
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.12 E-value=0.058 Score=49.77 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCC----CCC------------CCCCCCCCCCeeeecCCCcc
Q 018617 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG----AYP------------SPLGYGGFPKSVCTSVNECI 181 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G----~~p------------s~l~~~~fp~~v~~g~n~~~ 181 (353)
..+++...+.++++.+.+.++||++-.||.+.+.+.+.+++ ..+ .....+++...+.....+.
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~- 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDV- 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccC-
Confidence 45677788888999999999999999999999998887653 211 0110011111222222221
Q ss_pred ccC--CC-CCCcCCCCCeeEEEEeeeeCc-----------EEeceeeEEEccC
Q 018617 182 CHG--IP-DSRALEDGDTINIDVTVYLNG-----------YHGDTSATFFCGD 220 (353)
Q Consensus 182 ~H~--~p-~~r~L~~GDiv~iD~g~~~~G-----------Y~~D~sRT~~vG~ 220 (353)
++. .| ++.+|++|-++.+..+.+..+ +-.-+..|++|.+
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 111 22 367899999999999998754 5556788888844
No 61
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.02 E-value=0.068 Score=53.22 Aligned_cols=101 Identities=14% Similarity=0.208 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccc--eeeeccC----CccccCccccccCC---CCC
Q 018617 224 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ--FVGHGIG----RVFHADPVVLHYRN---NDH 294 (353)
Q Consensus 224 ~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~--~~GHgIG----~~~he~P~i~~~~~---~~~ 294 (353)
..+++-+.+.++++.+++.++||++..||.+.+++.+++.+-..+.. ...+|++ +.. .-.+.|+.+ +.+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSv--N~~v~H~~P~~~d~~ 98 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISV--NNCVGHFSPLKSDQD 98 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEec--CCeeeCCCCCCCCCC
Confidence 45677788899999999999999999999999988888754221111 0112222 111 122344432 234
Q ss_pred ceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeC
Q 018617 295 GRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 295 ~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
.+|++|.++.|+.+... .++.+-+.+|+.|.+
T Consensus 99 ~~Lk~GDvVkIDlG~~i------------------dGY~aD~arTv~vG~ 130 (389)
T TIGR00495 99 YILKEGDVVKIDLGCHI------------------DGFIALVAHTFVVGV 130 (389)
T ss_pred cCcCCCCEEEEEEEEEE------------------CCEEEEEEEEEEECC
Confidence 78999999999998865 236678899999964
No 62
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=95.95 E-value=0.079 Score=48.55 Aligned_cols=99 Identities=18% Similarity=0.147 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCeeeecCCCccccCCCCCCcCCCCC
Q 018617 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLG-YGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (353)
Q Consensus 117 ~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~-~~~fp~~v~~g~n~~~~H~~p~~r~L~~GD 195 (353)
...+++.+.+.++++.+.+.++||++-.||+..+.+.+.+.|..+..-. .+++...+.++.+.. .-..+|++|-
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~~~~~h~~g~~~~~~~~~~-----~~~~~l~~gm 194 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVEGVLSHQLKRVVSSGEGKA-----KLVECVKHGL 194 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEecCccccCcCceEecCCCCc-----cchhhccCCc
Confidence 4577888888999999999999999999999999999999994221100 011111222222111 0146799999
Q ss_pred eeEEEEeeeeCc-EEeceeeEEEccC
Q 018617 196 TINIDVTVYLNG-YHGDTSATFFCGD 220 (353)
Q Consensus 196 iv~iD~g~~~~G-Y~~D~sRT~~vG~ 220 (353)
++.+....+..| +-.-+..|++|.+
T Consensus 195 vf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 195 LFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred ccccceeEccCCCeEEEEEEEEEEcC
Confidence 999999998766 7779999999954
No 63
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=95.89 E-value=0.11 Score=49.83 Aligned_cols=97 Identities=10% Similarity=0.138 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeeccCCccccCccccccCC--CCCceecCC
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLN 300 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~--~~~~~L~~G 300 (353)
+..+++-+.+.++++.+++.++||++..||.+.+++.+.+.|... .|- -.|.. .....|+.+ +++.+|++|
T Consensus 6 ~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~--aFp-~~vs~----n~~~~H~~p~~~d~~~l~~G 78 (295)
T TIGR00501 6 EKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP--AFP-CNISI----NECAAHFTPKAGDKTVFKDG 78 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC--CCC-cceec----CCEeeCCCCCCCcCccCCCC
Confidence 346788889999999999999999999999999999999998652 110 00111 111223322 235689999
Q ss_pred cEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeC
Q 018617 301 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 344 (353)
Q Consensus 301 mvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~ 344 (353)
.++.|+.+... .++.+-+..|+.+.+
T Consensus 79 DvV~iD~G~~~------------------dGY~aD~arT~~vG~ 104 (295)
T TIGR00501 79 DVVKLDLGAHV------------------DGYIADTAITVDLGD 104 (295)
T ss_pred CEEEEEEeEEE------------------CCEEEEEEEEEEeCc
Confidence 99999988754 235677788888754
No 64
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.86 E-value=0.043 Score=51.85 Aligned_cols=86 Identities=13% Similarity=0.222 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcc-cceeeec--cCCccccCccccccCCCCCceecC
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV-RQFVGHG--IGRVFHADPVVLHYRNNDHGRMVL 299 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~-~~~~GHg--IG~~~he~P~i~~~~~~~~~~L~~ 299 (353)
+.+|++.+.++++++.|..++|||++..||++++.+.+-+.|.-+- -+++|.. +-..+.| .|-|.- .+.++|+.
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNE--viCHGI-PD~RpLed 199 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNE--VICHGI-PDSRPLED 199 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhh--eeecCC-CCcCcCCC
Confidence 4467788889999999999999999999999999999988775421 1111111 1111111 122211 14578999
Q ss_pred CcEEEEcccccc
Q 018617 300 NQTFTIEPMLTI 311 (353)
Q Consensus 300 GmvftIEP~i~~ 311 (353)
|..+.|...+|.
T Consensus 200 GDIvNiDVtvY~ 211 (369)
T KOG2738|consen 200 GDIVNIDVTVYL 211 (369)
T ss_pred CCEEeEEEEEEe
Confidence 999999999987
No 65
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=94.85 E-value=0.24 Score=48.99 Aligned_cols=96 Identities=23% Similarity=0.274 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCC-CccccCCC------CCCcC
Q 018617 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN-ECICHGIP------DSRAL 191 (353)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n-~~~~H~~p------~~r~L 191 (353)
+|+.-.++.++.+++.+.++||+|-.|++..+++.+.++|.-.. |.....-|+. ..-.|-.| ++.+|
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~------~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L 337 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLY------FLHGTGHGVGFVLDVHEHPQYLSPGSDTTL 337 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccc------ccCCccccCCCCcccCcCccccCCCCCccc
Confidence 45777888999999999999999999999999999999764322 2211111111 01123223 46789
Q ss_pred CCCCeeEEEEeeee-CcEEeceeeEEEccC
Q 018617 192 EDGDTINIDVTVYL-NGYHGDTSATFFCGD 220 (353)
Q Consensus 192 ~~GDiv~iD~g~~~-~GY~~D~sRT~~vG~ 220 (353)
++|-++.++-+.++ +.+-.-+..+++|.+
T Consensus 338 ~~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 338 EPGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred cCCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 99999999999885 457778999999965
No 66
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=94.37 E-value=0.44 Score=48.49 Aligned_cols=96 Identities=16% Similarity=0.211 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHc----CCCcccceeeeccCCccccCccccccCC--CCCceec
Q 018617 225 ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY----NYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMV 298 (353)
Q Consensus 225 ~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~----G~~~~~~~~GHgIG~~~he~P~i~~~~~--~~~~~L~ 298 (353)
.+++-+.+.++++.+.+.++||++..||...+++.+++. |...-..|- -+++.. -...|+.+ +++.+|+
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFP-t~vS~N----~~aaH~tP~~gd~~vLk 235 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFP-TGCSLN----HCAAHYTPNTGDKTVLT 235 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCC-ceeecC----ccccCCCCCCCCCcEec
Confidence 567777888888999999999999999999887765543 432111110 022221 11234333 2457899
Q ss_pred CCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEe
Q 018617 299 LNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 343 (353)
Q Consensus 299 ~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT 343 (353)
+|.++.|+.+... | ++.+-+..|+.+.
T Consensus 236 ~GDvVkID~G~~v---------d---------GYiaD~ArTv~vg 262 (470)
T PTZ00053 236 YDDVCKLDFGTHV---------N---------GRIIDCAFTVAFN 262 (470)
T ss_pred CCCeEEEEEeEEE---------C---------CEEEeEEEEEEeC
Confidence 9999999998754 2 3556677888774
No 67
>PRK10879 proline aminopeptidase P II; Provisional
Probab=93.87 E-value=0.65 Score=46.99 Aligned_cols=101 Identities=18% Similarity=0.239 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHH----HCCCCCCC-------CCCC-CCCCeeeecCCCccccCCC
Q 018617 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSP-------LGYG-GFPKSVCTSVNECICHGIP 186 (353)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~----~~G~~ps~-------l~~~-~fp~~v~~g~n~~~~H~~p 186 (353)
.|++..++.++.+++.+.++||++-.+|...+.+.+. +.|..+.. -++. .|+..+.-+.- .-.|-.|
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG-ldvHd~~ 362 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG-LDVHDVG 362 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC-cCcCcCC
Confidence 4666778888889999999999999999988876543 33432210 0000 12322211110 1123222
Q ss_pred -----CCCcCCCCCeeEEEEeeeeC----------cEEeceeeEEEccC
Q 018617 187 -----DSRALEDGDTINIDVTVYLN----------GYHGDTSATFFCGD 220 (353)
Q Consensus 187 -----~~r~L~~GDiv~iD~g~~~~----------GY~~D~sRT~~vG~ 220 (353)
++++|++|-++.|.-++++. |+-.-+..|++|.+
T Consensus 363 ~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~ 411 (438)
T PRK10879 363 VYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITE 411 (438)
T ss_pred CcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECC
Confidence 36789999999999999863 45566788898843
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=90.92 E-value=4.1 Score=37.30 Aligned_cols=96 Identities=17% Similarity=0.121 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhhhc-CCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeee--ecCCCc--cccCCCCCCcCCCCC
Q 018617 121 VSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNEC--ICHGIPDSRALEDGD 195 (353)
Q Consensus 121 ~A~~ia~~~l~~~~~~i-~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~--~g~n~~--~~H~~p~~r~L~~GD 195 (353)
++..++.++...+.+.+ +||++-.+|++.+++.+.+.|.+-. ...|+ .+. ....+. +.+...++++|++|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~--h~~GH--gIG~~l~~hE~P~i~~~~~~~~~L~~Gm 190 (224)
T cd01085 115 RDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG--HGTGH--GVGSFLNVHEGPQSISPAPNNVPLKAGM 190 (224)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC--CCCCC--CCCCCCcCCCCCCcCCcCCCCCCcCCCC
Confidence 34444455556666555 5999999999999999988886310 00111 111 111111 110112357899999
Q ss_pred eeEEEEeeeeCc-EEeceeeEEEccC
Q 018617 196 TINIDVTVYLNG-YHGDTSATFFCGD 220 (353)
Q Consensus 196 iv~iD~g~~~~G-Y~~D~sRT~~vG~ 220 (353)
++.|+-+.+..| +-.-+..|++|.+
T Consensus 191 vftiEP~iy~~g~~gvried~v~Vt~ 216 (224)
T cd01085 191 ILSNEPGYYKEGKYGIRIENLVLVVE 216 (224)
T ss_pred EEEECCEeEeCCCeEEEeeEEEEEee
Confidence 999999998643 4556888898843
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=89.47 E-value=2.3 Score=43.14 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHH----HHCCCCCC-------CCCC--CCCCCee----eecCCCcc
Q 018617 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS-------PLGY--GGFPKSV----CTSVNECI 181 (353)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i----~~~G~~ps-------~l~~--~~fp~~v----~~g~n~~~ 181 (353)
.++...++.++.+++.+.++||++-.||...+++.+ .+.|.... .-++ ..||..+ ...+.+.-
T Consensus 270 ~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~ 349 (443)
T PRK13607 270 FAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVA 349 (443)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCC
Confidence 346778888999999999999999999999887655 44444321 0011 0133322 22222220
Q ss_pred cc----------------CCCCCCcCCCCCeeEEEEeeeeCc
Q 018617 182 CH----------------GIPDSRALEDGDTINIDVTVYLNG 207 (353)
Q Consensus 182 ~H----------------~~p~~r~L~~GDiv~iD~g~~~~G 207 (353)
.. ..-++++|++|.+++|+-|+++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 350 GFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred CcccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 00 011357899999999999998865
No 70
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=87.21 E-value=5.1 Score=39.16 Aligned_cols=93 Identities=17% Similarity=0.274 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHH--------HHHHH-----cCCCc-----ccceeeeccCCccccCcc
Q 018617 224 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ--------DHADR-----YNYGV-----VRQFVGHGIGRVFHADPV 285 (353)
Q Consensus 224 ~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~--------~~~~~-----~G~~~-----~~~~~GHgIG~~~he~P~ 285 (353)
..+.+-+.+..++...++.|+||++..||-..-. +++++ .|... +.+..+| -.|.
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~h-------~sPl 95 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVCH-------FSPL 95 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceeec-------cCcC
Confidence 3566777889999999999999999988864433 33333 23221 1122222 2344
Q ss_pred ccccCCCCCceecCCcEEEEccccccCCCCCcccCCCceeeeeCCceEEEEEEEEEEeCC
Q 018617 286 VLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRD 345 (353)
Q Consensus 286 i~~~~~~~~~~L~~GmvftIEP~i~~~~~~~~~~~d~wt~~t~dg~~~~~~EdtvlIT~~ 345 (353)
.. +.+.+|++|.++-|..++.. || +.+-+.||++|++.
T Consensus 96 ks----d~~~~Lk~GDvVKIdLG~Hi---------DG---------fiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 96 KS----DADYTLKEGDVVKIDLGVHI---------DG---------FIALVAHTIVVGPA 133 (398)
T ss_pred CC----CCcccccCCCEEEEEeeeee---------cc---------ceeeeeeeEEeccC
Confidence 32 34789999999999988844 44 45778999999864
No 71
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=81.33 E-value=22 Score=34.20 Aligned_cols=83 Identities=19% Similarity=0.304 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHH----HcCCCcccceeeeccCCcc-ccCccccccCC--CCCc
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD----RYNYGVVRQFVGHGIGRVF-HADPVVLHYRN--NDHG 295 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~----~~G~~~~~~~~GHgIG~~~-he~P~i~~~~~--~~~~ 295 (353)
.+.+++.++-+++....-+.+|||.++-||.+.++...+ +.|.. ...|.+.|... |.+ +||.+ ++.+
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN~cA---AHyTpNaGd~t 159 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLNHCA---AHYTPNAGDKT 159 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCcccccchh---hhcCCCCCCce
Confidence 456777788888888899999999999999988876555 45553 34566666654 222 23332 4567
Q ss_pred eecCCcEEEEcccccc
Q 018617 296 RMVLNQTFTIEPMLTI 311 (353)
Q Consensus 296 ~L~~GmvftIEP~i~~ 311 (353)
+|+.+.|.-|.-+...
T Consensus 160 VLqydDV~KiDfGthi 175 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTHI 175 (397)
T ss_pred eeeecceEEEeccccc
Confidence 9999999998877643
No 72
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=69.65 E-value=17 Score=38.94 Aligned_cols=98 Identities=19% Similarity=0.267 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCC-----CccccCCCCCCcCCC
Q 018617 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN-----ECICHGIPDSRALED 193 (353)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n-----~~~~H~~p~~r~L~~ 193 (353)
|.++-...-.+-+++...++||.+-.+|...+...+.+.+-.-.+ .|.+.+.+|.- +.+.-..-++++|+.
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~----~~~k~lG~~iGlEFREssl~inaKnd~~lk~ 334 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVP----NFTKNLGFGIGLEFRESSLVINAKNDRVLKK 334 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhh----hhhhhcccccceeeecccccccccchhhhcc
Confidence 566766777778888889999999999999999999888643111 14444332221 111112235799999
Q ss_pred CCeeEEEEeee-------eCcEEeceeeEEEccC
Q 018617 194 GDTINIDVTVY-------LNGYHGDTSATFFCGD 220 (353)
Q Consensus 194 GDiv~iD~g~~-------~~GY~~D~sRT~~vG~ 220 (353)
|.+.+|.+|.. -+-|.--++-|+.||+
T Consensus 335 gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 335 GMVFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred CcEEEEeeccccccCcccccchhhhccceeeecC
Confidence 99999999863 2346667889999986
No 73
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=67.17 E-value=36 Score=30.37 Aligned_cols=74 Identities=15% Similarity=0.268 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHHcCCCcccceeeeccCCccccCccccccCCCCCceecCCcE
Q 018617 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQT 302 (353)
Q Consensus 223 ~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~L~~Gmv 302 (353)
++++..-+.+.+-+.+.+...-|..+..+.-+.+.+.+.+.. + .+|+-|-+|-- .+|.. +++ +.|++
T Consensus 115 ~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk-~--~~yy~q~~GAi----RYVva-d~g-----ekglT 181 (200)
T PF07305_consen 115 PEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGK-G--SRYYSQTEGAI----RYVVA-DNG-----EKGLT 181 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCC-C--CcceeeccCce----EEEEe-cCC-----CceeE
Confidence 667778888888899999999999999999999998887743 2 56777777732 23321 122 67999
Q ss_pred EEEcccc
Q 018617 303 FTIEPML 309 (353)
Q Consensus 303 ftIEP~i 309 (353)
|+|||.-
T Consensus 182 FAVEPIK 188 (200)
T PF07305_consen 182 FAVEPIK 188 (200)
T ss_pred EEeeeee
Confidence 9999974
No 74
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=66.50 E-value=20 Score=27.00 Aligned_cols=52 Identities=17% Similarity=0.309 Sum_probs=32.7
Q ss_pred cCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCC-ccccCCCCCCcCCCCCeeEE
Q 018617 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 199 (353)
Q Consensus 137 i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~-~~~H~~p~~r~L~~GDiv~i 199 (353)
++.|-|-.|++..+|..+.+.=.+ ..-.|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~-----------A~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKY-----------ALVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCe-----------eEEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 567999999999999877654221 11112111 01122456789999999986
No 75
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=55.48 E-value=18 Score=27.62 Aligned_cols=51 Identities=29% Similarity=0.275 Sum_probs=38.3
Q ss_pred CCcCCCCCeeEEEEeeee-CcEEecee------eEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 018617 188 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 247 (353)
Q Consensus 188 ~r~L~~GDiv~iD~g~~~-~GY~~D~s------RT~~vG~~~~~~~~l~~~~~~~~~~ai~~~kpG~ 247 (353)
++..++||.|.|++.++. +|-.-|.+ .+|.+|.- ....+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccC---------ccccchhhhcccccCCC
Confidence 456889999999999987 88777777 67777751 13346777888888884
No 76
>PRK01490 tig trigger factor; Provisional
Probab=52.79 E-value=43 Score=33.66 Aligned_cols=46 Identities=22% Similarity=0.439 Sum_probs=34.6
Q ss_pred CCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCeeEEEEeeeeCcEE
Q 018617 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYH 209 (353)
Q Consensus 140 GvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~iD~g~~~~GY~ 209 (353)
-+|+.+|+..+.+....++-+. +.+++++.||.|.+|+....+|-.
T Consensus 131 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~ 176 (435)
T PRK01490 131 EVTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEE 176 (435)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEE
Confidence 4788999999888776654321 224678999999999999887744
No 77
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=49.76 E-value=54 Score=34.67 Aligned_cols=82 Identities=21% Similarity=0.256 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecC--C---CccccCCCCC
Q 018617 114 KGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV--N---ECICHGIPDS 188 (353)
Q Consensus 114 ~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~--n---~~~~H~~p~~ 188 (353)
+....|.-+.. +-++....++||.+-.+|...+..++...|-+-.| .|-..+..+. . ...+...-++
T Consensus 299 e~~~Ny~fl~~----lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~ 370 (1001)
T COG5406 299 EQQKNYEFLYM----LQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNG 370 (1001)
T ss_pred HhhhhHHHHHH----HHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCC
Confidence 33444544443 33455568999999999999999999988754221 1333333222 1 1112223357
Q ss_pred CcCCCCCeeEEEEee
Q 018617 189 RALEDGDTINIDVTV 203 (353)
Q Consensus 189 r~L~~GDiv~iD~g~ 203 (353)
|+||.|++++|.+|-
T Consensus 371 r~lq~g~~fnis~gf 385 (1001)
T COG5406 371 RVLQAGCIFNISLGF 385 (1001)
T ss_pred ceeccccEEEEeecc
Confidence 999999999998853
No 78
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=46.00 E-value=62 Score=32.16 Aligned_cols=57 Identities=23% Similarity=0.455 Sum_probs=39.8
Q ss_pred CCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCC-CCCcCCCCCeeEEEEeeeeCcEEecee----e
Q 018617 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDTINIDVTVYLNGYHGDTS----A 214 (353)
Q Consensus 140 GvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p-~~r~L~~GDiv~iD~g~~~~GY~~D~s----R 214 (353)
-+|+.+|+..+.+....++-+. | ++++++.||.|.+|+....+|=.-+.+ .
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~ 174 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLV------------------------PVERRAAEKGDRVTIDFEGFIDGEAFEGGKAENF 174 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccccCCCCEEEEEEEEEECCEECcCCCCCCe
Confidence 3688999999988887765431 1 135789999999999988777544432 2
Q ss_pred EEEccC
Q 018617 215 TFFCGD 220 (353)
Q Consensus 215 T~~vG~ 220 (353)
+|.+|.
T Consensus 175 ~~~lg~ 180 (408)
T TIGR00115 175 SLELGS 180 (408)
T ss_pred EEEECC
Confidence 555554
No 79
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=40.39 E-value=45 Score=25.08 Aligned_cols=47 Identities=19% Similarity=0.257 Sum_probs=30.8
Q ss_pred cCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCeeEE
Q 018617 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (353)
Q Consensus 137 i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~i 199 (353)
++.|.|-.|++..+|..+.+. |-...-.+ ......+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~-----------F~~A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKG-----------FIEAVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhc-----------cEEEEEcc-----CEEECCCEEecCCCEEEE
Confidence 456889999999999877653 22111222 122234778999999987
No 80
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=32.07 E-value=58 Score=22.93 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHh---hh-cCCC-CcHHHHHHHHH
Q 018617 118 CMRVSGRLAAQVLEYAG---TL-VKPG-ITTDEIDKAVH 151 (353)
Q Consensus 118 ~mR~A~~ia~~~l~~~~---~~-i~pG-vTe~ei~~~v~ 151 (353)
.|.+|++||.++++.-. +. ++-| +|+.|+++++.
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~ 48 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLD 48 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTS
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcC
Confidence 68899999999997642 22 3456 79999998765
No 81
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=31.15 E-value=45 Score=25.37 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCC
Q 018617 124 RLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (353)
Q Consensus 124 ~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~ 159 (353)
.|+.++...+.+..+.++|+.||...+...+.++|.
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 344444444444444499999999999999997764
No 82
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=31.11 E-value=1e+02 Score=19.26 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHH
Q 018617 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (353)
Q Consensus 122 A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~ 155 (353)
.|.+...++..+.+.++...|+.+|...+.+.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4667788888899999999999999999988763
No 83
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=28.81 E-value=1.9e+02 Score=28.34 Aligned_cols=52 Identities=13% Similarity=0.270 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCC
Q 018617 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 162 (353)
Q Consensus 111 Ks~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps 162 (353)
-|+.||+.+-++-..-...+......+-|..+..||...++..+.+.-+.|.
T Consensus 97 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT 148 (381)
T PF09506_consen 97 VSDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT 148 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 3889999999999999999999999999999999999999999998877764
No 84
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=27.12 E-value=2.1e+02 Score=28.19 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCC
Q 018617 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 162 (353)
Q Consensus 111 Ks~~EI~~mR~A~~ia~~~l~~~~~~i~pGvTe~ei~~~v~~~i~~~G~~ps 162 (353)
-|+.||+.+-++-..-...+......+-|..+..|+...++..+.+.-+.|.
T Consensus 103 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT 154 (389)
T TIGR02399 103 VSKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT 154 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 3789999999999999999999999999999999999999999998877664
No 85
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=27.05 E-value=1.4e+02 Score=22.07 Aligned_cols=42 Identities=12% Similarity=0.323 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCcHhHHHHHHHHHHHH
Q 018617 221 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 262 (353)
Q Consensus 221 ~~~~~~~l~~~~~~~~~~ai~~~kpG~~~~dI~~ai~~~~~~ 262 (353)
.+..++.+++.+.+.++.++..++.|.+..=+...++...+.
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 468899999999999999999999997766665555555444
No 86
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=24.53 E-value=1.9e+02 Score=21.76 Aligned_cols=48 Identities=23% Similarity=0.338 Sum_probs=31.0
Q ss_pred cCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCeeEE
Q 018617 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (353)
Q Consensus 137 i~pGvTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~i 199 (353)
++.|.|-.|.+..+|..+.+. |-..+.. .| ..-.+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-----------f~~Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-----------FLHAIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-----------ceeeEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 466999999999999877643 1111111 11 223355788999999986
No 87
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=23.79 E-value=1.6e+02 Score=30.03 Aligned_cols=44 Identities=23% Similarity=0.410 Sum_probs=30.7
Q ss_pred CcHHHHHHHHHHHHHHCCCCCCCCCCCCCCCeeeecCCCccccCCCCCCcCCCCCeeEEEEeeeeCcE
Q 018617 141 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGY 208 (353)
Q Consensus 141 vTe~ei~~~v~~~i~~~G~~ps~l~~~~fp~~v~~g~n~~~~H~~p~~r~L~~GDiv~iD~g~~~~GY 208 (353)
+|+.||+..+......+.-+ .|.++.++.||.|.||+.+..+|=
T Consensus 132 v~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 132 VTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred cCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 67888888887666554322 122223899999999999988774
No 88
>PRK05423 hypothetical protein; Provisional
Probab=21.23 E-value=1.3e+02 Score=23.89 Aligned_cols=27 Identities=26% Similarity=0.530 Sum_probs=22.1
Q ss_pred HHHHHhhhcCCCCcHHHHHHHHHHHHH
Q 018617 129 VLEYAGTLVKPGITTDEIDKAVHQMII 155 (353)
Q Consensus 129 ~l~~~~~~i~pGvTe~ei~~~v~~~i~ 155 (353)
.++-+.+.|+||||..||..++..+-.
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr~ 70 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMKS 70 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHh
Confidence 456677889999999999999887654
No 89
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=20.79 E-value=4.9e+02 Score=26.37 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=52.9
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCcHHHHHHH----HHHHHHHCCCCCCC-----CCCCCCCCeeeecCC
Q 018617 110 VHDEKGIECMRVSGRLAAQVLEYAGTLVKP--GITTDEIDKA----VHQMIIDNGAYPSP-----LGYGGFPKSVCTSVN 178 (353)
Q Consensus 110 vKs~~EI~~mR~A~~ia~~~l~~~~~~i~p--GvTe~ei~~~----v~~~i~~~G~~ps~-----l~~~~fp~~v~~g~n 178 (353)
.=|+.+.+.+...-.+-++ +.+.++| |.|-.+|-.. +.+.+.+.|...+. ..+.-+|..| |.+
T Consensus 334 kFs~~Qr~LYeavL~vq~e----cik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhV--gHy 407 (488)
T KOG2414|consen 334 KFSDAQRDLYEAVLQVQEE----CIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHV--GHY 407 (488)
T ss_pred ccCcHHHHHHHHHHHHHHH----HHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCccc--chh
Confidence 3467777777766555544 4555566 8888777654 45555666753321 1122234432 211
Q ss_pred -CccccCC---CCCCcCCCCCeeEEEEeeee
Q 018617 179 -ECICHGI---PDSRALEDGDTINIDVTVYL 205 (353)
Q Consensus 179 -~~~~H~~---p~~r~L~~GDiv~iD~g~~~ 205 (353)
.--.|-. |.+.+|++|-+++|+-|+++
T Consensus 408 LGmDVHD~p~v~r~~pL~pg~ViTIEPGvYI 438 (488)
T KOG2414|consen 408 LGMDVHDCPTVSRDIPLQPGMVITIEPGVYI 438 (488)
T ss_pred cCcccccCCCCCCCccCCCCceEEecCceec
Confidence 1112333 45889999999999988864
Done!