Query 018618
Match_columns 353
No_of_seqs 154 out of 1285
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 02:36:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018618.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018618hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01772 MDH_euk_gproteo mala 100.0 8.5E-68 1.8E-72 503.7 32.4 310 43-352 1-311 (312)
2 cd01337 MDH_glyoxysomal_mitoch 100.0 1E-67 2.3E-72 502.3 32.9 309 42-351 1-310 (310)
3 PLN00106 malate dehydrogenase 100.0 9.2E-66 2E-70 491.5 35.0 317 29-345 6-322 (323)
4 COG0039 Mdh Malate/lactate deh 100.0 6E-66 1.3E-70 485.4 30.7 297 42-352 1-312 (313)
5 PTZ00325 malate dehydrogenase; 100.0 1.1E-62 2.3E-67 470.1 34.9 313 39-353 6-319 (321)
6 cd05290 LDH_3 A subgroup of L- 100.0 3.8E-63 8.3E-68 471.8 30.5 286 43-344 1-306 (307)
7 PRK05086 malate dehydrogenase; 100.0 1.1E-61 2.4E-66 463.4 34.4 310 42-353 1-312 (312)
8 TIGR01759 MalateDH-SF1 malate 100.0 3.6E-62 7.9E-67 467.5 30.3 295 40-347 2-323 (323)
9 cd05293 LDH_1 A subgroup of L- 100.0 5.8E-62 1.3E-66 464.9 31.4 291 40-345 2-311 (312)
10 KOG1495 Lactate dehydrogenase 100.0 5.6E-62 1.2E-66 438.9 27.3 291 41-349 20-331 (332)
11 KOG1494 NAD-dependent malate d 100.0 1.7E-61 3.7E-66 437.7 29.8 337 8-352 3-340 (345)
12 PLN02602 lactate dehydrogenase 100.0 1.8E-61 3.9E-66 466.7 31.6 291 42-347 38-348 (350)
13 TIGR01771 L-LDH-NAD L-lactate 100.0 6.4E-61 1.4E-65 455.5 27.0 281 46-342 1-299 (299)
14 PRK00066 ldh L-lactate dehydro 100.0 2.6E-60 5.6E-65 454.6 31.2 290 41-346 6-312 (315)
15 PRK05442 malate dehydrogenase; 100.0 1.9E-60 4.2E-65 456.1 29.5 297 40-349 3-324 (326)
16 PLN00112 malate dehydrogenase 100.0 1.2E-59 2.6E-64 463.1 31.3 301 38-351 97-424 (444)
17 cd00704 MDH Malate dehydrogena 100.0 9.5E-60 2.1E-64 451.4 28.5 294 42-348 1-323 (323)
18 TIGR01757 Malate-DH_plant mala 100.0 2.3E-59 5.1E-64 454.9 31.4 299 39-350 42-367 (387)
19 cd05291 HicDH_like L-2-hydroxy 100.0 4.5E-59 9.8E-64 445.4 30.3 288 42-345 1-305 (306)
20 PTZ00117 malate dehydrogenase; 100.0 1.8E-58 3.9E-63 443.0 33.6 297 39-349 3-316 (319)
21 cd00300 LDH_like L-lactate deh 100.0 7E-59 1.5E-63 442.6 29.4 286 44-344 1-299 (300)
22 cd01338 MDH_choloroplast_like 100.0 8.8E-59 1.9E-63 444.5 29.7 295 40-347 1-320 (322)
23 PTZ00082 L-lactate dehydrogena 100.0 8.9E-58 1.9E-62 437.9 32.4 292 40-345 5-318 (321)
24 TIGR01763 MalateDH_bact malate 100.0 4.9E-58 1.1E-62 437.3 30.2 288 42-345 2-303 (305)
25 cd05292 LDH_2 A subgroup of L- 100.0 6.5E-57 1.4E-61 430.5 31.4 288 42-345 1-306 (308)
26 TIGR01758 MDH_euk_cyt malate d 100.0 1.8E-56 3.9E-61 428.9 29.7 296 43-348 1-323 (324)
27 cd01336 MDH_cytoplasmic_cytoso 100.0 1.5E-56 3.2E-61 430.2 28.2 296 40-348 1-325 (325)
28 cd05294 LDH-like_MDH_nadp A la 100.0 6.2E-55 1.3E-59 416.8 30.1 290 42-345 1-307 (309)
29 cd01339 LDH-like_MDH L-lactate 100.0 8.4E-55 1.8E-59 414.9 30.0 287 44-344 1-299 (300)
30 PRK06223 malate dehydrogenase; 100.0 2.2E-54 4.8E-59 413.2 31.0 292 41-346 2-305 (307)
31 cd05295 MDH_like Malate dehydr 100.0 4.3E-55 9.3E-60 430.6 26.7 295 38-348 120-451 (452)
32 PLN00135 malate dehydrogenase 100.0 1.4E-54 3E-59 412.3 27.8 272 69-352 15-309 (309)
33 TIGR01756 LDH_protist lactate 100.0 1.5E-53 3.3E-58 406.1 28.5 271 69-351 17-312 (313)
34 cd00650 LDH_MDH_like NAD-depen 100.0 4.1E-50 8.8E-55 375.9 28.7 254 44-344 1-262 (263)
35 KOG1496 Malate dehydrogenase [ 100.0 9.3E-48 2E-52 341.6 21.4 305 39-352 2-331 (332)
36 PF02866 Ldh_1_C: lactate/mala 100.0 2E-33 4.3E-38 247.5 13.9 159 187-351 1-174 (174)
37 PF00056 Ldh_1_N: lactate/mala 100.0 5.4E-32 1.2E-36 230.3 11.6 139 42-185 1-141 (141)
38 PRK15076 alpha-galactosidase; 100.0 2.5E-29 5.5E-34 249.7 24.2 291 41-348 1-386 (431)
39 cd05197 GH4_glycoside_hydrolas 100.0 8.2E-29 1.8E-33 245.4 26.4 284 42-347 1-391 (425)
40 cd05296 GH4_P_beta_glucosidase 100.0 1.6E-28 3.4E-33 243.0 25.9 286 42-347 1-380 (419)
41 cd05298 GH4_GlvA_pagL_like Gly 100.0 7.3E-27 1.6E-31 231.9 28.1 291 42-348 1-395 (437)
42 cd05297 GH4_alpha_glucosidase_ 99.9 2.7E-25 5.8E-30 221.1 25.5 289 42-348 1-389 (423)
43 COG1486 CelF Alpha-galactosida 99.9 4.1E-25 9E-30 215.4 23.4 293 40-348 2-398 (442)
44 PF02056 Glyco_hydro_4: Family 99.8 3E-19 6.4E-24 157.2 14.8 152 43-204 1-183 (183)
45 COG1004 Ugd Predicted UDP-gluc 98.9 3.2E-08 6.9E-13 95.9 15.0 115 42-168 1-131 (414)
46 PF02737 3HCDH_N: 3-hydroxyacy 98.8 1.2E-08 2.6E-13 90.3 7.7 118 43-188 1-137 (180)
47 COG1250 FadB 3-hydroxyacyl-CoA 98.8 5.4E-08 1.2E-12 92.5 10.7 122 41-187 3-140 (307)
48 TIGR02437 FadB fatty oxidation 98.7 8.7E-08 1.9E-12 101.6 11.5 138 22-187 288-450 (714)
49 TIGR02441 fa_ox_alpha_mit fatt 98.7 1.5E-07 3.3E-12 100.1 12.7 137 22-186 312-471 (737)
50 PRK07066 3-hydroxybutyryl-CoA 98.6 3.6E-07 7.7E-12 88.0 12.3 119 42-187 8-141 (321)
51 TIGR02440 FadJ fatty oxidation 98.6 4.2E-07 9.2E-12 96.3 12.5 120 40-187 303-442 (699)
52 PRK11730 fadB multifunctional 98.6 7.6E-07 1.6E-11 94.6 14.0 118 42-187 314-450 (715)
53 PRK07819 3-hydroxybutyryl-CoA 98.5 7.8E-07 1.7E-11 84.5 11.7 119 42-188 6-144 (286)
54 PRK11154 fadJ multifunctional 98.5 8.3E-07 1.8E-11 94.2 12.0 119 41-187 309-447 (708)
55 PF03721 UDPG_MGDP_dh_N: UDP-g 98.5 3E-07 6.5E-12 81.8 7.1 123 42-178 1-141 (185)
56 PF02719 Polysacc_synt_2: Poly 98.5 1.1E-07 2.4E-12 89.7 4.2 114 44-158 1-128 (293)
57 PRK08293 3-hydroxybutyryl-CoA 98.5 1.5E-06 3.3E-11 82.4 11.8 119 42-187 4-142 (287)
58 TIGR01915 npdG NADPH-dependent 98.4 5.1E-06 1.1E-10 75.7 14.0 102 42-163 1-106 (219)
59 COG1086 Predicted nucleoside-d 98.4 3.2E-06 7E-11 85.4 13.3 166 41-229 250-433 (588)
60 KOG2304 3-hydroxyacyl-CoA dehy 98.4 2.8E-07 6.1E-12 82.8 4.8 121 40-187 10-154 (298)
61 PF01073 3Beta_HSD: 3-beta hyd 98.4 2.2E-06 4.7E-11 81.2 10.6 116 45-162 1-118 (280)
62 PF01210 NAD_Gly3P_dh_N: NAD-d 98.3 1.3E-06 2.9E-11 75.4 7.5 94 43-158 1-103 (157)
63 PRK15181 Vi polysaccharide bio 98.3 1.2E-05 2.7E-10 78.1 15.1 170 41-218 15-200 (348)
64 PLN02166 dTDP-glucose 4,6-dehy 98.3 6.4E-06 1.4E-10 82.8 12.8 169 41-217 120-297 (436)
65 PRK06035 3-hydroxyacyl-CoA deh 98.3 3.8E-06 8.3E-11 79.8 10.6 118 42-187 4-143 (291)
66 PRK05808 3-hydroxybutyryl-CoA 98.3 8.8E-06 1.9E-10 76.9 13.0 118 42-187 4-140 (282)
67 PLN02427 UDP-apiose/xylose syn 98.2 1.2E-05 2.7E-10 79.1 12.8 114 40-159 13-136 (386)
68 PLN02353 probable UDP-glucose 98.2 1.3E-05 2.8E-10 81.2 12.8 119 41-167 1-137 (473)
69 PRK08125 bifunctional UDP-gluc 98.2 2.3E-05 4.9E-10 82.9 14.6 180 26-217 303-497 (660)
70 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.2 5.7E-06 1.2E-10 84.5 9.6 121 41-188 5-143 (503)
71 PRK08268 3-hydroxy-acyl-CoA de 98.2 1.3E-05 2.7E-10 82.1 11.4 120 42-189 8-146 (507)
72 PLN02650 dihydroflavonol-4-red 98.2 3.8E-05 8.3E-10 74.5 14.3 179 38-218 2-198 (351)
73 TIGR02622 CDP_4_6_dhtase CDP-g 98.2 5.4E-05 1.2E-09 73.5 15.3 175 40-217 3-193 (349)
74 PRK07530 3-hydroxybutyryl-CoA 98.2 3.2E-05 7E-10 73.4 13.2 121 41-189 4-143 (292)
75 PLN00198 anthocyanidin reducta 98.1 5.6E-05 1.2E-09 72.9 14.7 174 41-217 9-202 (338)
76 TIGR03589 PseB UDP-N-acetylglu 98.1 2.3E-05 4.9E-10 75.5 11.9 113 41-158 4-124 (324)
77 PLN02662 cinnamyl-alcohol dehy 98.1 5.2E-05 1.1E-09 72.3 14.0 113 42-157 5-125 (322)
78 PRK09260 3-hydroxybutyryl-CoA 98.1 1.7E-05 3.6E-10 75.3 10.2 99 42-162 2-119 (288)
79 KOG1502 Flavonol reductase/cin 98.1 3.5E-05 7.6E-10 73.7 12.2 119 40-163 5-132 (327)
80 PRK06130 3-hydroxybutyryl-CoA 98.1 1.8E-05 3.9E-10 75.8 10.3 119 42-187 5-137 (311)
81 PLN02206 UDP-glucuronate decar 98.1 3.3E-05 7.2E-10 77.8 12.5 169 41-217 119-296 (442)
82 PRK06129 3-hydroxyacyl-CoA deh 98.1 6E-05 1.3E-09 72.3 13.6 103 41-164 2-122 (308)
83 TIGR01181 dTDP_gluc_dehyt dTDP 98.1 7E-05 1.5E-09 70.7 13.5 167 43-217 1-184 (317)
84 PLN02695 GDP-D-mannose-3',5'-e 98.1 1.9E-05 4.1E-10 77.6 9.8 170 40-218 20-202 (370)
85 COG1087 GalE UDP-glucose 4-epi 98.1 7.4E-05 1.6E-09 70.3 13.1 163 42-217 1-176 (329)
86 PLN02545 3-hydroxybutyryl-CoA 98.1 5.1E-05 1.1E-09 72.2 12.4 103 42-164 5-123 (295)
87 PRK07531 bifunctional 3-hydrox 98.1 3.5E-05 7.6E-10 78.7 11.9 103 42-165 5-121 (495)
88 COG2085 Predicted dinucleotide 98.0 7.7E-05 1.7E-09 67.0 11.2 97 41-162 1-97 (211)
89 PRK11908 NAD-dependent epimera 98.0 7.5E-05 1.6E-09 72.4 11.8 164 41-217 1-183 (347)
90 CHL00194 ycf39 Ycf39; Provisio 98.0 4.7E-05 1E-09 73.0 10.2 107 42-158 1-109 (317)
91 PRK15057 UDP-glucose 6-dehydro 97.9 9.2E-05 2E-09 73.3 12.0 112 42-167 1-127 (388)
92 PLN02214 cinnamoyl-CoA reducta 97.9 0.00017 3.7E-09 70.0 13.6 169 41-217 10-195 (342)
93 PRK10217 dTDP-glucose 4,6-dehy 97.9 0.00021 4.5E-09 69.3 14.0 176 42-218 2-195 (355)
94 TIGR03026 NDP-sugDHase nucleot 97.9 0.00019 4.2E-09 71.6 14.0 117 42-172 1-135 (411)
95 PF03807 F420_oxidored: NADP o 97.9 2.5E-05 5.4E-10 61.3 6.1 94 43-160 1-96 (96)
96 COG0451 WcaG Nucleoside-diphos 97.9 9.4E-05 2E-09 69.9 11.1 168 42-219 1-178 (314)
97 PRK10084 dTDP-glucose 4,6 dehy 97.9 0.00014 3.1E-09 70.4 12.6 176 42-218 1-202 (352)
98 TIGR03466 HpnA hopanoid-associ 97.9 0.0001 2.2E-09 70.1 11.2 111 42-158 1-112 (328)
99 PLN02260 probable rhamnose bio 97.9 0.00042 9.2E-09 73.3 16.3 181 38-218 3-194 (668)
100 PLN02989 cinnamyl-alcohol dehy 97.9 0.00044 9.6E-09 66.1 14.8 175 41-217 5-198 (325)
101 COG0240 GpsA Glycerol-3-phosph 97.8 9.9E-05 2.2E-09 70.7 9.9 117 41-186 1-131 (329)
102 TIGR01472 gmd GDP-mannose 4,6- 97.8 0.00035 7.6E-09 67.5 13.8 160 42-205 1-177 (343)
103 PLN02572 UDP-sulfoquinovose sy 97.8 0.00024 5.1E-09 71.6 13.0 176 40-218 46-263 (442)
104 PLN02778 3,5-epimerase/4-reduc 97.8 0.00033 7.1E-09 66.8 13.2 90 40-151 8-104 (298)
105 PRK10675 UDP-galactose-4-epime 97.8 0.00021 4.6E-09 68.6 12.0 114 42-158 1-123 (338)
106 PRK06194 hypothetical protein; 97.8 0.00031 6.6E-09 65.9 12.6 158 42-215 7-192 (287)
107 PRK00094 gpsA NAD(P)H-dependen 97.8 0.00025 5.4E-09 68.0 11.8 100 41-162 1-109 (325)
108 PLN02896 cinnamyl-alcohol dehy 97.8 0.00025 5.4E-09 68.9 11.9 173 40-217 9-210 (353)
109 PLN02986 cinnamyl-alcohol dehy 97.8 0.0007 1.5E-08 64.8 14.7 105 42-148 6-117 (322)
110 PLN03209 translocon at the inn 97.8 0.00028 6E-09 72.7 12.3 116 40-158 79-207 (576)
111 PTZ00345 glycerol-3-phosphate 97.8 0.00027 5.8E-09 69.4 11.8 107 26-158 2-129 (365)
112 PRK06522 2-dehydropantoate 2-r 97.8 0.00058 1.3E-08 64.8 13.8 104 42-165 1-107 (304)
113 PF13460 NAD_binding_10: NADH( 97.7 0.00047 1E-08 60.2 11.3 93 44-158 1-97 (183)
114 PRK12921 2-dehydropantoate 2-r 97.7 0.00058 1.2E-08 64.9 12.7 119 42-189 1-127 (305)
115 PLN02583 cinnamoyl-CoA reducta 97.7 0.00091 2E-08 63.5 13.7 104 42-149 7-118 (297)
116 PRK08229 2-dehydropantoate 2-r 97.7 0.00047 1E-08 66.8 11.7 101 41-164 2-113 (341)
117 PF03446 NAD_binding_2: NAD bi 97.7 0.0003 6.4E-09 61.1 9.2 65 41-117 1-65 (163)
118 PRK11150 rfaD ADP-L-glycero-D- 97.6 0.00067 1.5E-08 64.4 12.4 160 44-217 2-174 (308)
119 PRK14620 NAD(P)H-dependent gly 97.6 0.00043 9.4E-09 66.7 11.0 98 42-163 1-111 (326)
120 TIGR01777 yfcH conserved hypot 97.6 0.00029 6.3E-09 65.9 9.5 98 44-150 1-102 (292)
121 PRK15182 Vi polysaccharide bio 97.6 0.0013 2.7E-08 66.0 14.5 114 38-167 3-130 (425)
122 PRK14619 NAD(P)H-dependent gly 97.6 0.0004 8.6E-09 66.6 10.5 79 40-159 3-83 (308)
123 PLN02653 GDP-mannose 4,6-dehyd 97.6 0.00043 9.4E-09 66.8 10.8 161 38-205 3-183 (340)
124 PRK09987 dTDP-4-dehydrorhamnos 97.6 0.00018 3.9E-09 68.5 7.9 99 42-158 1-103 (299)
125 PLN02686 cinnamoyl-CoA reducta 97.6 0.00048 1E-08 67.6 10.4 176 39-217 51-250 (367)
126 PRK14618 NAD(P)H-dependent gly 97.6 0.00076 1.6E-08 65.1 11.6 98 40-162 3-108 (328)
127 PRK12439 NAD(P)H-dependent gly 97.6 0.00057 1.2E-08 66.5 10.7 99 40-163 6-116 (341)
128 TIGR03376 glycerol3P_DH glycer 97.5 0.0006 1.3E-08 66.4 10.6 96 43-158 1-116 (342)
129 KOG1429 dTDP-glucose 4-6-dehyd 97.5 0.00017 3.7E-09 67.3 6.3 114 39-158 25-140 (350)
130 PRK07201 short chain dehydroge 97.5 0.0014 3.1E-08 68.8 14.1 111 42-156 1-123 (657)
131 PRK06249 2-dehydropantoate 2-r 97.5 0.00065 1.4E-08 65.2 10.1 120 40-186 4-127 (313)
132 PLN02253 xanthoxin dehydrogena 97.5 0.0023 5E-08 59.8 13.5 147 41-204 18-188 (280)
133 PRK11064 wecC UDP-N-acetyl-D-m 97.5 0.00099 2.2E-08 66.6 11.3 109 41-167 3-129 (415)
134 PRK13394 3-hydroxybutyrate deh 97.5 0.0024 5.3E-08 58.6 13.2 115 41-159 7-144 (262)
135 TIGR01214 rmlD dTDP-4-dehydror 97.5 0.00058 1.3E-08 63.9 8.9 95 43-158 1-99 (287)
136 PLN02240 UDP-glucose 4-epimera 97.4 0.0024 5.2E-08 61.7 13.3 115 41-158 5-131 (352)
137 PRK08267 short chain dehydroge 97.4 0.0033 7.1E-08 58.0 13.6 116 42-160 2-137 (260)
138 COG1088 RfbB dTDP-D-glucose 4, 97.4 0.0019 4.1E-08 60.9 11.6 165 42-206 1-174 (340)
139 PRK07417 arogenate dehydrogena 97.4 0.0011 2.4E-08 62.6 10.3 64 42-117 1-65 (279)
140 TIGR02197 heptose_epim ADP-L-g 97.4 0.0011 2.4E-08 62.7 10.4 109 44-158 1-113 (314)
141 PF10727 Rossmann-like: Rossma 97.4 0.00051 1.1E-08 57.3 7.0 102 40-167 9-115 (127)
142 PRK12384 sorbitol-6-phosphate 97.4 0.0075 1.6E-07 55.5 15.3 116 43-160 4-142 (259)
143 PRK12829 short chain dehydroge 97.4 0.0054 1.2E-07 56.4 14.3 100 40-145 10-129 (264)
144 PRK08643 acetoin reductase; Va 97.4 0.011 2.4E-07 54.2 16.0 155 42-214 3-180 (256)
145 PRK07102 short chain dehydroge 97.3 0.012 2.6E-07 53.6 16.1 115 42-159 2-135 (243)
146 COG1748 LYS9 Saccharopine dehy 97.3 0.0022 4.8E-08 63.1 11.6 75 41-118 1-77 (389)
147 COG0300 DltE Short-chain dehyd 97.3 0.0087 1.9E-07 56.1 15.0 118 38-159 3-143 (265)
148 PRK12320 hypothetical protein; 97.3 0.00078 1.7E-08 71.2 8.7 101 42-158 1-101 (699)
149 PF01370 Epimerase: NAD depend 97.3 0.001 2.2E-08 60.1 8.3 167 44-217 1-174 (236)
150 PRK05717 oxidoreductase; Valid 97.3 0.0021 4.5E-08 59.2 10.6 145 42-203 11-176 (255)
151 PRK05866 short chain dehydroge 97.3 0.0077 1.7E-07 57.1 14.7 96 21-120 20-128 (293)
152 PRK07231 fabG 3-ketoacyl-(acyl 97.3 0.0099 2.1E-07 54.1 15.0 114 41-159 5-141 (251)
153 PRK07067 sorbitol dehydrogenas 97.3 0.0041 9E-08 57.2 12.5 145 42-202 7-171 (257)
154 PRK05865 hypothetical protein; 97.3 0.0016 3.6E-08 70.2 11.0 104 42-161 1-105 (854)
155 PRK14982 acyl-ACP reductase; P 97.3 0.0017 3.8E-08 63.0 10.1 97 40-164 154-252 (340)
156 PRK07523 gluconate 5-dehydroge 97.3 0.0036 7.7E-08 57.6 11.8 116 41-160 10-147 (255)
157 PLN02657 3,8-divinyl protochlo 97.3 0.0027 5.8E-08 62.9 11.6 113 40-158 59-181 (390)
158 PRK08269 3-hydroxybutyryl-CoA 97.3 0.002 4.3E-08 62.1 10.3 111 53-187 1-137 (314)
159 PRK07502 cyclohexadienyl dehyd 97.3 0.0019 4.2E-08 61.7 10.3 67 42-117 7-74 (307)
160 KOG1430 C-3 sterol dehydrogena 97.2 0.0016 3.4E-08 63.5 9.4 110 40-151 3-119 (361)
161 PRK07326 short chain dehydroge 97.2 0.0077 1.7E-07 54.5 13.4 114 42-160 7-141 (237)
162 PRK08655 prephenate dehydrogen 97.2 0.0029 6.3E-08 63.7 11.4 66 42-117 1-66 (437)
163 PLN02688 pyrroline-5-carboxyla 97.2 0.0018 3.8E-08 60.5 9.2 95 42-162 1-99 (266)
164 PRK10538 malonic semialdehyde 97.2 0.0037 8E-08 57.4 11.1 152 42-214 1-175 (248)
165 PRK07680 late competence prote 97.2 0.0021 4.5E-08 60.5 9.6 97 42-162 1-100 (273)
166 PRK06482 short chain dehydroge 97.2 0.0087 1.9E-07 55.7 13.4 113 42-159 3-135 (276)
167 PRK12937 short chain dehydroge 97.2 0.0076 1.6E-07 54.8 12.7 147 41-203 5-172 (245)
168 TIGR01179 galE UDP-glucose-4-e 97.2 0.0031 6.7E-08 59.7 10.4 107 43-154 1-117 (328)
169 PF01118 Semialdhyde_dh: Semia 97.2 0.00075 1.6E-08 55.6 5.4 72 43-117 1-74 (121)
170 PRK07814 short chain dehydroge 97.2 0.014 2.9E-07 54.1 14.4 155 41-214 10-187 (263)
171 PRK12549 shikimate 5-dehydroge 97.1 0.0028 6E-08 60.2 9.8 72 40-116 126-199 (284)
172 PRK06180 short chain dehydroge 97.1 0.011 2.3E-07 55.3 13.7 114 41-159 4-137 (277)
173 PRK09135 pteridine reductase; 97.1 0.012 2.6E-07 53.5 13.5 147 42-203 7-175 (249)
174 TIGR00872 gnd_rel 6-phosphoglu 97.1 0.0036 7.8E-08 59.7 10.4 95 42-161 1-96 (298)
175 PRK11880 pyrroline-5-carboxyla 97.1 0.0034 7.3E-08 58.7 10.0 96 41-162 2-98 (267)
176 PRK06924 short chain dehydroge 97.1 0.0054 1.2E-07 56.1 11.2 34 42-77 2-35 (251)
177 PRK07069 short chain dehydroge 97.1 0.027 5.8E-07 51.3 15.8 114 43-159 1-138 (251)
178 PRK08945 putative oxoacyl-(acy 97.1 0.018 3.9E-07 52.6 14.6 119 38-159 9-152 (247)
179 PRK05875 short chain dehydroge 97.1 0.015 3.3E-07 54.0 14.3 159 41-215 7-188 (276)
180 TIGR03206 benzo_BadH 2-hydroxy 97.1 0.011 2.4E-07 53.9 13.1 115 41-159 3-139 (250)
181 PRK06914 short chain dehydroge 97.1 0.025 5.3E-07 52.7 15.8 114 42-158 4-139 (280)
182 PRK08340 glucose-1-dehydrogena 97.1 0.007 1.5E-07 55.9 11.9 74 42-120 1-87 (259)
183 PRK12828 short chain dehydroge 97.1 0.0051 1.1E-07 55.5 10.7 115 41-159 7-141 (239)
184 PRK05855 short chain dehydroge 97.1 0.02 4.3E-07 58.8 16.4 117 39-159 313-452 (582)
185 PRK12429 3-hydroxybutyrate deh 97.1 0.0042 9.2E-08 56.8 10.3 113 42-159 5-140 (258)
186 PRK05876 short chain dehydroge 97.1 0.013 2.8E-07 55.0 13.7 114 42-159 7-143 (275)
187 PRK12827 short chain dehydroge 97.1 0.02 4.4E-07 51.9 14.7 102 41-146 6-130 (249)
188 PRK07806 short chain dehydroge 97.1 0.0035 7.6E-08 57.2 9.7 114 42-159 7-135 (248)
189 PRK07666 fabG 3-ketoacyl-(acyl 97.1 0.015 3.2E-07 52.8 13.8 115 42-160 8-144 (239)
190 PRK08278 short chain dehydroge 97.1 0.024 5.2E-07 52.9 15.4 158 42-215 7-193 (273)
191 TIGR01505 tartro_sem_red 2-hyd 97.1 0.0024 5.3E-08 60.5 8.6 63 43-117 1-63 (291)
192 TIGR01832 kduD 2-deoxy-D-gluco 97.1 0.026 5.6E-07 51.5 15.2 156 41-214 5-181 (248)
193 PRK11559 garR tartronate semia 97.1 0.0031 6.7E-08 59.9 9.2 64 42-117 3-66 (296)
194 PRK06172 short chain dehydroge 97.1 0.011 2.4E-07 54.2 12.7 156 41-215 7-186 (253)
195 TIGR02354 thiF_fam2 thiamine b 97.1 0.0073 1.6E-07 54.3 11.1 33 42-76 22-54 (200)
196 PRK07576 short chain dehydroge 97.0 0.011 2.3E-07 55.0 12.6 117 41-161 9-146 (264)
197 PRK08265 short chain dehydroge 97.0 0.0094 2E-07 55.2 12.1 152 42-214 7-178 (261)
198 PLN00141 Tic62-NAD(P)-related 97.0 0.0039 8.5E-08 57.5 9.5 112 40-159 16-133 (251)
199 PRK12936 3-ketoacyl-(acyl-carr 97.0 0.0063 1.4E-07 55.2 10.7 113 41-160 6-140 (245)
200 PRK07832 short chain dehydroge 97.0 0.058 1.3E-06 50.1 17.5 118 42-161 1-140 (272)
201 TIGR01746 Thioester-redct thio 97.0 0.0089 1.9E-07 57.4 12.3 111 43-154 1-132 (367)
202 PRK07063 short chain dehydroge 97.0 0.027 5.8E-07 51.9 15.0 157 41-214 7-186 (260)
203 PRK12745 3-ketoacyl-(acyl-carr 97.0 0.038 8.2E-07 50.5 15.9 101 42-146 3-125 (256)
204 PRK06181 short chain dehydroge 97.0 0.014 3.1E-07 53.7 13.1 115 42-160 2-138 (263)
205 PLN02996 fatty acyl-CoA reduct 97.0 0.012 2.6E-07 60.2 13.5 120 38-158 8-161 (491)
206 PRK06545 prephenate dehydrogen 97.0 0.0059 1.3E-07 59.9 10.9 68 42-117 1-68 (359)
207 PRK12939 short chain dehydroge 97.0 0.023 5E-07 51.6 14.2 115 41-159 7-143 (250)
208 PRK07024 short chain dehydroge 97.0 0.0083 1.8E-07 55.3 11.2 34 42-77 3-36 (257)
209 PRK06841 short chain dehydroge 97.0 0.0095 2.1E-07 54.6 11.5 113 41-159 15-148 (255)
210 PRK06124 gluconate 5-dehydroge 97.0 0.0084 1.8E-07 55.0 11.1 118 40-161 10-149 (256)
211 PF11975 Glyco_hydro_4C: Famil 97.0 0.0054 1.2E-07 56.4 9.8 71 274-348 141-215 (232)
212 PRK07634 pyrroline-5-carboxyla 97.0 0.011 2.3E-07 54.5 11.6 69 41-117 4-74 (245)
213 PRK07856 short chain dehydroge 97.0 0.013 2.9E-07 53.7 12.3 141 41-203 6-167 (252)
214 PRK07890 short chain dehydroge 96.9 0.03 6.6E-07 51.2 14.6 116 40-159 4-141 (258)
215 PRK06500 short chain dehydroge 96.9 0.012 2.6E-07 53.6 11.7 110 42-158 7-136 (249)
216 COG1893 ApbA Ketopantoate redu 96.9 0.0044 9.6E-08 59.5 9.0 120 42-189 1-126 (307)
217 PTZ00142 6-phosphogluconate de 96.9 0.005 1.1E-07 62.5 9.8 100 42-164 2-107 (470)
218 PRK06101 short chain dehydroge 96.9 0.015 3.4E-07 53.0 12.2 145 42-202 2-159 (240)
219 PRK08507 prephenate dehydrogen 96.9 0.0071 1.5E-07 56.9 10.1 66 42-117 1-66 (275)
220 TIGR01830 3oxo_ACP_reduc 3-oxo 96.9 0.017 3.6E-07 52.1 12.1 113 44-160 1-136 (239)
221 PRK06928 pyrroline-5-carboxyla 96.9 0.0075 1.6E-07 56.9 10.1 100 41-163 1-103 (277)
222 PRK15461 NADH-dependent gamma- 96.9 0.0056 1.2E-07 58.4 9.3 64 42-117 2-65 (296)
223 PRK06182 short chain dehydroge 96.9 0.011 2.4E-07 55.0 11.2 113 41-159 3-133 (273)
224 PF02558 ApbA: Ketopantoate re 96.9 0.0023 4.9E-08 54.3 6.0 118 44-188 1-125 (151)
225 PRK11199 tyrA bifunctional cho 96.9 0.0056 1.2E-07 60.4 9.5 53 41-117 98-150 (374)
226 PRK12826 3-ketoacyl-(acyl-carr 96.9 0.012 2.6E-07 53.5 11.1 114 41-159 6-142 (251)
227 COG4221 Short-chain alcohol de 96.9 0.06 1.3E-06 49.6 15.4 155 42-214 7-181 (246)
228 PF04321 RmlD_sub_bind: RmlD s 96.9 0.001 2.2E-08 63.0 4.1 98 42-158 1-100 (286)
229 PRK12480 D-lactate dehydrogena 96.9 0.0064 1.4E-07 59.0 9.7 91 40-159 145-235 (330)
230 PRK12746 short chain dehydroge 96.9 0.046 1E-06 50.0 15.0 114 42-159 7-147 (254)
231 PRK08213 gluconate 5-dehydroge 96.9 0.023 5E-07 52.3 13.0 115 41-159 12-149 (259)
232 COG2084 MmsB 3-hydroxyisobutyr 96.8 0.0077 1.7E-07 57.0 9.8 65 42-117 1-65 (286)
233 cd01065 NAD_bind_Shikimate_DH 96.8 0.0057 1.2E-07 51.9 8.3 74 39-120 17-92 (155)
234 PRK06138 short chain dehydroge 96.8 0.035 7.5E-07 50.6 14.0 113 41-159 5-140 (252)
235 PRK06128 oxidoreductase; Provi 96.8 0.031 6.6E-07 53.0 14.0 115 41-159 55-192 (300)
236 PRK07774 short chain dehydroge 96.8 0.027 5.8E-07 51.4 13.1 154 41-215 6-184 (250)
237 PRK08263 short chain dehydroge 96.8 0.014 3E-07 54.4 11.4 111 42-158 4-135 (275)
238 COG1090 Predicted nucleoside-d 96.8 0.0094 2E-07 55.8 9.9 98 44-152 1-103 (297)
239 PRK12490 6-phosphogluconate de 96.8 0.0057 1.2E-07 58.4 8.8 64 42-117 1-67 (299)
240 PRK06701 short chain dehydroge 96.8 0.033 7.2E-07 52.6 14.0 115 41-159 46-182 (290)
241 PLN02260 probable rhamnose bio 96.8 0.012 2.5E-07 62.4 12.0 90 39-150 378-474 (668)
242 PRK12935 acetoacetyl-CoA reduc 96.8 0.045 9.7E-07 49.8 14.4 114 42-159 7-143 (247)
243 PRK06179 short chain dehydroge 96.8 0.031 6.7E-07 51.8 13.5 111 42-159 5-132 (270)
244 PRK08085 gluconate 5-dehydroge 96.8 0.022 4.7E-07 52.3 12.2 114 42-159 10-145 (254)
245 PRK07679 pyrroline-5-carboxyla 96.8 0.016 3.4E-07 54.7 11.5 69 41-117 3-73 (279)
246 PRK12491 pyrroline-5-carboxyla 96.8 0.0076 1.7E-07 56.8 9.3 67 42-117 3-71 (272)
247 PLN02780 ketoreductase/ oxidor 96.8 0.029 6.3E-07 54.0 13.5 115 42-159 54-193 (320)
248 TIGR02356 adenyl_thiF thiazole 96.8 0.0089 1.9E-07 53.8 9.3 74 42-117 22-119 (202)
249 PRK08642 fabG 3-ketoacyl-(acyl 96.8 0.017 3.6E-07 52.8 11.2 153 42-212 6-185 (253)
250 TIGR03325 BphB_TodD cis-2,3-di 96.7 0.013 2.7E-07 54.2 10.3 35 41-77 5-39 (262)
251 PRK05854 short chain dehydroge 96.7 0.02 4.3E-07 54.8 11.9 169 42-214 15-205 (313)
252 PRK09291 short chain dehydroge 96.7 0.056 1.2E-06 49.4 14.5 75 42-120 3-84 (257)
253 PRK05708 2-dehydropantoate 2-r 96.7 0.019 4.2E-07 54.9 11.7 115 41-186 2-125 (305)
254 TIGR02632 RhaD_aldol-ADH rhamn 96.7 0.028 6.1E-07 59.7 14.0 149 41-203 414-585 (676)
255 PLN02256 arogenate dehydrogena 96.7 0.014 3E-07 56.0 10.6 65 40-117 35-100 (304)
256 PRK06935 2-deoxy-D-gluconate 3 96.7 0.023 4.9E-07 52.3 11.8 154 41-212 15-189 (258)
257 PLN02725 GDP-4-keto-6-deoxyman 96.7 0.0042 9.1E-08 58.5 7.0 154 45-217 1-164 (306)
258 PRK05557 fabG 3-ketoacyl-(acyl 96.7 0.038 8.2E-07 49.9 13.1 115 41-159 5-142 (248)
259 PRK05653 fabG 3-ketoacyl-(acyl 96.7 0.012 2.7E-07 53.1 9.9 113 42-158 6-140 (246)
260 PRK12825 fabG 3-ketoacyl-(acyl 96.7 0.016 3.5E-07 52.3 10.6 102 41-146 6-127 (249)
261 PRK07825 short chain dehydroge 96.7 0.045 9.9E-07 50.8 13.9 114 41-159 5-137 (273)
262 COG0569 TrkA K+ transport syst 96.7 0.0028 6.1E-08 58.1 5.5 70 42-118 1-75 (225)
263 PRK09599 6-phosphogluconate de 96.7 0.0079 1.7E-07 57.4 8.9 64 42-117 1-67 (301)
264 PRK12481 2-deoxy-D-gluconate 3 96.7 0.019 4.2E-07 52.8 11.2 155 42-214 9-184 (251)
265 PRK07424 bifunctional sterol d 96.7 0.026 5.6E-07 56.3 12.7 125 17-145 151-284 (406)
266 TIGR01963 PHB_DH 3-hydroxybuty 96.7 0.029 6.3E-07 51.1 12.3 113 42-159 2-137 (255)
267 PRK09242 tropinone reductase; 96.7 0.072 1.6E-06 48.9 15.0 115 42-159 10-147 (257)
268 PRK05650 short chain dehydroge 96.7 0.021 4.5E-07 53.0 11.5 113 42-159 1-136 (270)
269 PRK06113 7-alpha-hydroxysteroi 96.7 0.039 8.4E-07 50.7 13.1 115 41-159 11-146 (255)
270 PRK08251 short chain dehydroge 96.7 0.079 1.7E-06 48.2 15.1 102 42-145 3-123 (248)
271 PF01488 Shikimate_DH: Shikima 96.7 0.0057 1.2E-07 51.4 6.8 75 39-120 10-86 (135)
272 PRK08589 short chain dehydroge 96.7 0.039 8.4E-07 51.4 13.2 154 41-214 6-182 (272)
273 PRK09072 short chain dehydroge 96.6 0.037 7.9E-07 51.1 12.8 114 41-159 5-139 (263)
274 KOG2305 3-hydroxyacyl-CoA dehy 96.6 0.0046 1E-07 56.1 6.3 105 42-165 4-125 (313)
275 PRK07097 gluconate 5-dehydroge 96.6 0.04 8.7E-07 51.0 12.9 154 42-214 11-187 (265)
276 PRK06949 short chain dehydroge 96.6 0.024 5.2E-07 51.9 11.3 36 40-77 8-43 (258)
277 PRK12742 oxidoreductase; Provi 96.6 0.033 7.2E-07 50.3 12.0 156 41-214 6-174 (237)
278 PRK12367 short chain dehydroge 96.6 0.035 7.5E-07 51.3 12.3 100 42-145 15-118 (245)
279 PRK08277 D-mannonate oxidoredu 96.6 0.11 2.4E-06 48.3 15.8 74 42-119 11-97 (278)
280 PRK08226 short chain dehydroge 96.6 0.051 1.1E-06 50.0 13.3 115 41-159 6-141 (263)
281 TIGR02415 23BDH acetoin reduct 96.6 0.074 1.6E-06 48.5 14.3 112 43-158 2-136 (254)
282 PRK06197 short chain dehydroge 96.6 0.038 8.3E-07 52.4 12.7 169 42-215 17-207 (306)
283 PRK05993 short chain dehydroge 96.6 0.017 3.7E-07 54.0 10.1 112 42-159 5-135 (277)
284 PRK07985 oxidoreductase; Provi 96.6 0.12 2.7E-06 48.8 16.0 156 41-214 49-227 (294)
285 PRK06523 short chain dehydroge 96.6 0.0064 1.4E-07 56.0 7.0 35 41-77 9-43 (260)
286 PRK06398 aldose dehydrogenase; 96.6 0.037 8.1E-07 51.1 12.2 150 42-215 7-172 (258)
287 PRK08628 short chain dehydroge 96.6 0.092 2E-06 48.2 14.7 113 42-158 8-139 (258)
288 PRK08264 short chain dehydroge 96.6 0.034 7.3E-07 50.4 11.6 142 41-202 6-164 (238)
289 PRK12747 short chain dehydroge 96.5 0.14 3E-06 46.9 15.8 156 41-214 4-186 (252)
290 PRK08339 short chain dehydroge 96.5 0.23 4.9E-06 46.1 17.3 115 42-160 9-145 (263)
291 PRK07023 short chain dehydroge 96.5 0.0093 2E-07 54.4 7.9 35 41-77 1-35 (243)
292 PRK09186 flagellin modificatio 96.5 0.034 7.3E-07 50.9 11.6 35 41-77 4-38 (256)
293 PRK12744 short chain dehydroge 96.5 0.11 2.4E-06 47.6 15.1 155 42-215 9-188 (257)
294 PRK08993 2-deoxy-D-gluconate 3 96.5 0.073 1.6E-06 48.9 13.8 155 42-214 11-186 (253)
295 PRK08936 glucose-1-dehydrogena 96.5 0.2 4.3E-06 46.1 16.8 157 41-215 7-187 (261)
296 PRK07478 short chain dehydroge 96.5 0.083 1.8E-06 48.4 14.2 155 42-214 7-185 (254)
297 PRK07453 protochlorophyllide o 96.5 0.025 5.4E-07 54.2 10.9 114 41-158 6-144 (322)
298 PRK12743 oxidoreductase; Provi 96.5 0.17 3.6E-06 46.5 16.1 114 42-159 3-140 (256)
299 PRK13243 glyoxylate reductase; 96.5 0.013 2.8E-07 56.9 9.0 97 41-164 150-248 (333)
300 PRK05884 short chain dehydroge 96.5 0.014 3E-07 53.0 8.6 34 42-77 1-34 (223)
301 cd05213 NAD_bind_Glutamyl_tRNA 96.5 0.023 5E-07 54.6 10.6 100 39-164 176-279 (311)
302 PRK07035 short chain dehydroge 96.5 0.039 8.6E-07 50.4 11.8 114 42-159 9-145 (252)
303 PRK07074 short chain dehydroge 96.5 0.035 7.7E-07 50.9 11.4 143 42-203 3-167 (257)
304 PRK05693 short chain dehydroge 96.5 0.057 1.2E-06 50.2 12.8 113 42-159 2-130 (274)
305 COG1091 RfbD dTDP-4-dehydrorha 96.5 0.014 3.1E-07 55.0 8.6 148 42-222 1-158 (281)
306 PRK06476 pyrroline-5-carboxyla 96.5 0.017 3.6E-07 53.8 9.2 68 42-117 1-69 (258)
307 PRK05479 ketol-acid reductoiso 96.5 0.023 5E-07 55.0 10.3 66 40-117 16-81 (330)
308 PRK15469 ghrA bifunctional gly 96.5 0.029 6.3E-07 54.0 11.0 91 41-158 136-226 (312)
309 cd01078 NAD_bind_H4MPT_DH NADP 96.4 0.011 2.3E-07 52.7 7.4 76 40-118 27-106 (194)
310 PRK08063 enoyl-(acyl carrier p 96.4 0.1 2.2E-06 47.4 14.2 114 42-159 5-141 (250)
311 PRK06196 oxidoreductase; Provi 96.4 0.04 8.7E-07 52.6 11.9 113 42-159 27-156 (315)
312 PRK06198 short chain dehydroge 96.4 0.16 3.4E-06 46.6 15.5 115 41-159 6-144 (260)
313 PRK06057 short chain dehydroge 96.4 0.017 3.8E-07 53.0 9.0 35 41-77 7-41 (255)
314 PRK15059 tartronate semialdehy 96.4 0.011 2.5E-07 56.2 8.0 63 42-117 1-63 (292)
315 PRK09009 C factor cell-cell si 96.4 0.022 4.9E-07 51.5 9.6 71 42-120 1-78 (235)
316 PRK12823 benD 1,6-dihydroxycyc 96.4 0.049 1.1E-06 50.0 12.0 153 41-214 8-183 (260)
317 PRK07574 formate dehydrogenase 96.4 0.022 4.7E-07 56.4 10.1 100 40-164 191-292 (385)
318 PRK06077 fabG 3-ketoacyl-(acyl 96.4 0.15 3.2E-06 46.4 15.1 147 41-203 6-173 (252)
319 PRK08219 short chain dehydroge 96.4 0.035 7.5E-07 49.7 10.6 74 42-120 4-82 (227)
320 PRK06139 short chain dehydroge 96.4 0.077 1.7E-06 51.4 13.6 114 41-159 7-143 (330)
321 PLN00016 RNA-binding protein; 96.4 0.022 4.8E-07 55.9 10.1 35 41-77 52-90 (378)
322 TIGR02685 pter_reduc_Leis pter 96.4 0.18 4E-06 46.6 15.8 32 43-76 3-34 (267)
323 PRK05690 molybdopterin biosynt 96.4 0.041 9E-07 51.0 11.2 33 43-77 34-66 (245)
324 PRK07109 short chain dehydroge 96.4 0.081 1.7E-06 51.2 13.7 113 42-159 9-144 (334)
325 PRK08220 2,3-dihydroxybenzoate 96.4 0.05 1.1E-06 49.6 11.7 108 41-159 8-135 (252)
326 PRK05565 fabG 3-ketoacyl-(acyl 96.4 0.041 8.8E-07 49.8 11.1 102 42-147 6-127 (247)
327 PRK07831 short chain dehydroge 96.4 0.38 8.1E-06 44.3 17.7 157 42-214 18-198 (262)
328 PRK07454 short chain dehydroge 96.4 0.038 8.2E-07 50.2 10.9 114 41-159 6-142 (241)
329 PRK06947 glucose-1-dehydrogena 96.4 0.14 3E-06 46.6 14.6 32 42-75 3-34 (248)
330 PRK07060 short chain dehydroge 96.4 0.016 3.5E-07 52.6 8.4 115 41-159 9-137 (245)
331 PRK06200 2,3-dihydroxy-2,3-dih 96.3 0.026 5.5E-07 52.2 9.7 35 41-77 6-40 (263)
332 COG0345 ProC Pyrroline-5-carbo 96.3 0.023 5.1E-07 53.3 9.3 97 41-162 1-99 (266)
333 COG1712 Predicted dinucleotide 96.3 0.039 8.5E-07 50.2 10.2 96 42-162 1-97 (255)
334 PRK08703 short chain dehydroge 96.3 0.18 3.9E-06 45.7 15.1 35 41-77 6-40 (239)
335 PRK12475 thiamine/molybdopteri 96.3 0.026 5.5E-07 55.0 9.8 74 42-117 25-124 (338)
336 PRK05600 thiamine biosynthesis 96.3 0.025 5.5E-07 55.7 9.9 34 42-77 42-75 (370)
337 PRK06123 short chain dehydroge 96.3 0.17 3.8E-06 45.9 15.0 156 43-214 4-185 (248)
338 COG2910 Putative NADH-flavin r 96.3 0.032 6.9E-07 49.3 9.3 104 42-158 1-104 (211)
339 PTZ00431 pyrroline carboxylate 96.3 0.023 4.9E-07 53.1 9.1 90 41-162 3-94 (260)
340 PRK14806 bifunctional cyclohex 96.3 0.03 6.4E-07 60.1 11.1 92 42-158 4-97 (735)
341 PRK08818 prephenate dehydrogen 96.3 0.031 6.8E-07 55.0 10.3 56 41-117 4-59 (370)
342 PLN02712 arogenate dehydrogena 96.3 0.027 5.8E-07 59.7 10.5 67 38-117 49-116 (667)
343 cd01487 E1_ThiF_like E1_ThiF_l 96.3 0.046 1E-06 48.0 10.4 33 43-77 1-33 (174)
344 cd05311 NAD_bind_2_malic_enz N 96.3 0.066 1.4E-06 49.1 11.7 99 40-162 24-132 (226)
345 PRK05867 short chain dehydroge 96.3 0.062 1.3E-06 49.3 11.7 113 42-158 10-145 (253)
346 TIGR03649 ergot_EASG ergot alk 96.2 0.017 3.6E-07 54.2 8.0 33 43-77 1-33 (285)
347 PRK07688 thiamine/molybdopteri 96.2 0.029 6.3E-07 54.6 9.8 34 42-77 25-58 (339)
348 cd00757 ThiF_MoeB_HesA_family 96.2 0.029 6.3E-07 51.4 9.2 34 42-77 22-55 (228)
349 PLN03139 formate dehydrogenase 96.2 0.03 6.5E-07 55.4 9.7 100 40-164 198-299 (386)
350 PF05368 NmrA: NmrA-like famil 96.2 0.014 3.1E-07 53.0 7.1 92 44-149 1-94 (233)
351 TIGR01831 fabG_rel 3-oxoacyl-( 96.2 0.1 2.2E-06 47.2 12.7 114 44-161 1-138 (239)
352 cd05312 NAD_bind_1_malic_enz N 96.2 0.028 6E-07 53.0 9.0 101 41-162 25-144 (279)
353 KOG1371 UDP-glucose 4-epimeras 96.2 0.058 1.3E-06 51.6 11.1 105 41-149 2-119 (343)
354 TIGR02355 moeB molybdopterin s 96.2 0.031 6.6E-07 51.8 9.2 34 42-77 25-58 (240)
355 COG0677 WecC UDP-N-acetyl-D-ma 96.2 0.067 1.5E-06 52.5 11.7 113 42-168 10-139 (436)
356 PRK08324 short chain dehydroge 96.2 0.071 1.5E-06 56.7 13.1 114 41-159 422-558 (681)
357 PRK09134 short chain dehydroge 96.2 0.061 1.3E-06 49.5 11.2 112 42-157 10-144 (258)
358 PF00899 ThiF: ThiF family; I 96.2 0.019 4.1E-07 48.0 7.1 74 42-117 3-100 (135)
359 PRK07904 short chain dehydroge 96.2 0.09 1.9E-06 48.5 12.3 115 41-159 8-146 (253)
360 PRK08416 7-alpha-hydroxysteroi 96.2 0.36 7.9E-06 44.4 16.4 147 41-203 8-184 (260)
361 TIGR00873 gnd 6-phosphoglucona 96.2 0.019 4.2E-07 58.3 8.3 98 43-160 1-100 (467)
362 PF03949 Malic_M: Malic enzyme 96.1 0.014 3E-07 54.3 6.6 107 40-166 24-151 (255)
363 PRK08177 short chain dehydroge 96.1 0.072 1.6E-06 48.0 11.3 34 42-77 2-35 (225)
364 PRK14194 bifunctional 5,10-met 96.1 0.031 6.8E-07 53.3 9.1 76 41-161 159-235 (301)
365 cd01483 E1_enzyme_family Super 96.1 0.05 1.1E-06 45.8 9.6 33 43-77 1-33 (143)
366 PRK06171 sorbitol-6-phosphate 96.1 0.015 3.3E-07 53.7 6.9 34 42-77 10-43 (266)
367 PRK07201 short chain dehydroge 96.1 0.16 3.5E-06 53.4 15.4 114 41-159 371-509 (657)
368 PRK07677 short chain dehydroge 96.1 0.19 4.1E-06 46.0 14.1 114 42-159 2-138 (252)
369 COG0287 TyrA Prephenate dehydr 96.1 0.028 6.1E-07 53.2 8.6 69 41-117 3-72 (279)
370 PRK06463 fabG 3-ketoacyl-(acyl 96.1 0.099 2.1E-06 48.0 12.1 114 41-159 7-138 (255)
371 PRK13304 L-aspartate dehydroge 96.1 0.04 8.6E-07 51.7 9.5 68 41-117 1-69 (265)
372 PRK12824 acetoacetyl-CoA reduc 96.1 0.12 2.7E-06 46.6 12.5 113 42-159 3-139 (245)
373 PRK08644 thiamine biosynthesis 96.1 0.056 1.2E-06 49.1 10.1 32 43-76 30-61 (212)
374 cd01485 E1-1_like Ubiquitin ac 96.1 0.042 9E-07 49.3 9.1 34 42-77 20-53 (198)
375 PRK08605 D-lactate dehydrogena 96.0 0.029 6.4E-07 54.4 8.7 63 40-117 145-208 (332)
376 PRK06550 fabG 3-ketoacyl-(acyl 96.0 0.36 7.8E-06 43.4 15.4 148 42-214 6-168 (235)
377 PF01113 DapB_N: Dihydrodipico 96.0 0.023 5E-07 47.0 6.8 72 42-117 1-75 (124)
378 PRK08223 hypothetical protein; 96.0 0.03 6.6E-07 53.1 8.4 33 43-77 29-61 (287)
379 PRK06114 short chain dehydroge 96.0 0.086 1.9E-06 48.4 11.4 113 42-159 9-145 (254)
380 PRK08306 dipicolinate synthase 96.0 0.041 9E-07 52.5 9.4 69 38-117 149-218 (296)
381 TIGR02853 spore_dpaA dipicolin 96.0 0.027 5.8E-07 53.6 8.0 96 41-164 151-247 (287)
382 PRK05786 fabG 3-ketoacyl-(acyl 96.0 0.065 1.4E-06 48.4 10.3 34 42-77 6-39 (238)
383 PRK07775 short chain dehydroge 96.0 0.27 5.8E-06 45.8 14.7 100 42-145 11-129 (274)
384 KOG2666 UDP-glucose/GDP-mannos 95.9 0.031 6.6E-07 53.2 7.9 77 41-122 1-91 (481)
385 PRK12938 acetyacetyl-CoA reduc 95.9 0.19 4.2E-06 45.5 13.3 114 42-159 4-140 (246)
386 PLN02928 oxidoreductase family 95.9 0.03 6.6E-07 54.7 8.3 102 41-158 159-262 (347)
387 PLN02503 fatty acyl-CoA reduct 95.9 0.098 2.1E-06 54.8 12.5 109 40-149 118-258 (605)
388 TIGR01724 hmd_rel H2-forming N 95.9 0.071 1.5E-06 51.2 10.5 66 42-117 1-89 (341)
389 PRK07062 short chain dehydroge 95.9 0.24 5.3E-06 45.6 14.1 115 42-159 9-146 (265)
390 PRK05872 short chain dehydroge 95.9 0.16 3.4E-06 48.1 13.0 114 41-159 9-143 (296)
391 PRK08217 fabG 3-ketoacyl-(acyl 95.9 0.068 1.5E-06 48.6 10.1 35 41-77 5-39 (253)
392 PRK13302 putative L-aspartate 95.9 0.051 1.1E-06 51.2 9.4 70 39-118 4-76 (271)
393 PRK06718 precorrin-2 dehydroge 95.9 0.1 2.2E-06 47.0 11.0 70 41-118 10-79 (202)
394 PRK15116 sulfur acceptor prote 95.9 0.11 2.5E-06 48.8 11.6 34 42-77 31-64 (268)
395 PRK07578 short chain dehydroge 95.9 0.062 1.3E-06 47.4 9.4 101 42-158 1-111 (199)
396 PRK07792 fabG 3-ketoacyl-(acyl 95.8 0.19 4.2E-06 47.8 13.3 100 41-144 12-130 (306)
397 TIGR01829 AcAcCoA_reduct aceto 95.8 0.28 6E-06 44.2 13.8 113 43-160 2-138 (242)
398 PRK07577 short chain dehydroge 95.8 0.088 1.9E-06 47.4 10.4 34 42-77 4-37 (234)
399 PRK07984 enoyl-(acyl carrier p 95.8 0.21 4.5E-06 46.5 13.1 157 42-214 7-187 (262)
400 KOG1205 Predicted dehydrogenas 95.8 0.32 6.9E-06 46.1 14.3 119 42-164 13-155 (282)
401 PRK06484 short chain dehydroge 95.8 0.047 1E-06 55.8 9.5 156 41-214 269-442 (520)
402 PRK08261 fabG 3-ketoacyl-(acyl 95.8 0.13 2.8E-06 51.7 12.6 117 41-159 210-343 (450)
403 PLN02712 arogenate dehydrogena 95.8 0.063 1.4E-06 57.0 10.6 66 39-117 367-433 (667)
404 TIGR00465 ilvC ketol-acid redu 95.8 0.06 1.3E-06 51.9 9.6 65 41-117 3-67 (314)
405 cd01492 Aos1_SUMO Ubiquitin ac 95.8 0.08 1.7E-06 47.4 9.7 34 42-77 22-55 (197)
406 cd00762 NAD_bind_malic_enz NAD 95.8 0.037 8.1E-07 51.5 7.7 121 41-186 25-166 (254)
407 PRK08291 ectoine utilization p 95.7 0.058 1.3E-06 52.3 9.4 73 41-118 132-206 (330)
408 PF03435 Saccharop_dh: Sacchar 95.7 0.0082 1.8E-07 59.2 3.5 71 44-119 1-77 (386)
409 PRK06953 short chain dehydroge 95.7 0.17 3.7E-06 45.4 11.9 113 42-159 2-130 (222)
410 TIGR02371 ala_DH_arch alanine 95.7 0.051 1.1E-06 52.6 8.8 71 41-117 128-200 (325)
411 PRK05599 hypothetical protein; 95.7 0.57 1.2E-05 42.9 15.4 146 42-203 1-169 (246)
412 TIGR01745 asd_gamma aspartate- 95.7 0.035 7.5E-07 54.4 7.4 71 42-118 1-73 (366)
413 PRK06484 short chain dehydroge 95.6 0.12 2.6E-06 52.8 11.7 115 42-159 6-141 (520)
414 PRK06483 dihydromonapterin red 95.6 0.17 3.7E-06 45.8 11.5 34 42-77 3-36 (236)
415 PRK06125 short chain dehydroge 95.6 0.6 1.3E-05 42.8 15.3 114 42-159 8-140 (259)
416 PRK08618 ornithine cyclodeamin 95.6 0.059 1.3E-06 52.1 8.8 73 41-118 127-201 (325)
417 TIGR01692 HIBADH 3-hydroxyisob 95.6 0.043 9.3E-07 52.0 7.6 60 46-117 1-60 (288)
418 PLN02968 Probable N-acetyl-gam 95.6 0.025 5.4E-07 56.0 6.1 76 40-118 37-113 (381)
419 PRK00048 dihydrodipicolinate r 95.6 0.67 1.5E-05 43.2 15.4 68 41-117 1-68 (257)
420 PRK06079 enoyl-(acyl carrier p 95.5 0.14 3.1E-06 47.1 10.8 34 42-77 8-43 (252)
421 PRK09496 trkA potassium transp 95.5 0.049 1.1E-06 54.6 8.3 71 42-117 1-73 (453)
422 PRK03659 glutathione-regulated 95.5 0.061 1.3E-06 56.4 9.2 138 41-210 400-542 (601)
423 PLN02350 phosphogluconate dehy 95.5 0.05 1.1E-06 55.5 8.3 99 40-161 5-110 (493)
424 PRK06940 short chain dehydroge 95.5 0.15 3.2E-06 47.7 11.0 110 43-159 4-126 (275)
425 PRK05597 molybdopterin biosynt 95.5 0.14 3E-06 50.2 11.1 33 43-77 30-62 (355)
426 PLN02383 aspartate semialdehyd 95.5 0.026 5.7E-07 55.0 5.8 71 41-118 7-78 (344)
427 cd00401 AdoHcyase S-adenosyl-L 95.4 0.11 2.3E-06 52.0 10.1 90 40-160 201-291 (413)
428 KOG1201 Hydroxysteroid 17-beta 95.4 0.085 1.8E-06 50.0 8.8 113 40-158 37-172 (300)
429 PRK05476 S-adenosyl-L-homocyst 95.4 0.12 2.6E-06 51.8 10.5 92 40-161 211-302 (425)
430 TIGR01035 hemA glutamyl-tRNA r 95.4 0.056 1.2E-06 54.2 8.2 103 39-164 178-283 (417)
431 PRK07340 ornithine cyclodeamin 95.4 0.075 1.6E-06 50.9 8.7 71 41-118 125-197 (304)
432 PF02423 OCD_Mu_crystall: Orni 95.4 0.055 1.2E-06 52.1 7.8 69 42-117 129-200 (313)
433 PTZ00075 Adenosylhomocysteinas 95.4 0.07 1.5E-06 54.0 8.6 90 40-160 253-343 (476)
434 TIGR01850 argC N-acetyl-gamma- 95.4 0.04 8.7E-07 53.8 6.7 74 42-118 1-77 (346)
435 PRK06407 ornithine cyclodeamin 95.4 0.083 1.8E-06 50.6 8.8 73 41-118 117-191 (301)
436 PRK06603 enoyl-(acyl carrier p 95.3 0.78 1.7E-05 42.4 15.0 156 42-213 9-187 (260)
437 TIGR01327 PGDH D-3-phosphoglyc 95.3 0.061 1.3E-06 55.5 8.2 64 41-117 138-201 (525)
438 PRK06141 ornithine cyclodeamin 95.3 0.097 2.1E-06 50.4 9.1 70 41-117 125-197 (314)
439 PRK08762 molybdopterin biosynt 95.3 0.16 3.6E-06 50.0 10.9 32 43-76 137-168 (376)
440 PRK14874 aspartate-semialdehyd 95.3 0.039 8.5E-07 53.6 6.4 71 41-118 1-72 (334)
441 TIGR01500 sepiapter_red sepiap 95.3 0.39 8.5E-06 44.1 12.9 42 43-86 2-49 (256)
442 TIGR01470 cysG_Nterm siroheme 95.2 0.21 4.5E-06 45.1 10.5 69 42-118 10-78 (205)
443 TIGR02992 ectoine_eutC ectoine 95.2 0.11 2.5E-06 50.2 9.2 73 41-118 129-203 (326)
444 PF02826 2-Hacid_dh_C: D-isome 95.2 0.045 9.7E-07 48.1 5.9 93 40-159 35-128 (178)
445 PF07993 NAD_binding_4: Male s 95.1 0.061 1.3E-06 49.6 7.0 112 46-158 1-135 (249)
446 PLN02494 adenosylhomocysteinas 95.1 0.13 2.8E-06 52.1 9.6 92 40-162 253-345 (477)
447 TIGR00518 alaDH alanine dehydr 95.1 0.071 1.5E-06 52.6 7.6 82 33-120 159-241 (370)
448 cd01491 Ube1_repeat1 Ubiquitin 95.1 0.16 3.6E-06 48.2 9.8 73 42-117 20-113 (286)
449 PRK06598 aspartate-semialdehyd 95.1 0.14 2.9E-06 50.4 9.4 72 41-118 1-74 (369)
450 PRK00045 hemA glutamyl-tRNA re 95.1 0.085 1.8E-06 52.9 8.2 105 39-165 180-287 (423)
451 cd01080 NAD_bind_m-THF_DH_Cycl 95.1 0.075 1.6E-06 46.5 6.8 56 39-120 42-98 (168)
452 PRK06719 precorrin-2 dehydroge 95.1 0.25 5.3E-06 42.7 10.0 65 42-117 14-78 (157)
453 PRK13581 D-3-phosphoglycerate 95.1 0.073 1.6E-06 54.9 7.9 64 40-117 139-202 (526)
454 COG0136 Asd Aspartate-semialde 95.0 0.11 2.4E-06 50.1 8.4 73 41-118 1-75 (334)
455 TIGR00936 ahcY adenosylhomocys 95.0 0.12 2.7E-06 51.4 8.9 67 39-118 193-259 (406)
456 PRK08415 enoyl-(acyl carrier p 94.9 1.4 3E-05 41.2 15.7 34 42-77 6-41 (274)
457 PRK07878 molybdopterin biosynt 94.9 0.24 5.1E-06 49.3 10.9 33 43-77 44-76 (392)
458 PRK07041 short chain dehydroge 94.9 0.18 4E-06 45.2 9.2 107 46-158 2-123 (230)
459 COG0002 ArgC Acetylglutamate s 94.9 0.062 1.3E-06 51.9 6.2 73 41-116 2-77 (349)
460 COG1064 AdhP Zn-dependent alco 94.9 0.87 1.9E-05 44.3 14.1 117 38-186 164-284 (339)
461 PRK06823 ornithine cyclodeamin 94.8 0.18 3.8E-06 48.7 9.4 72 41-118 128-201 (315)
462 PRK08017 oxidoreductase; Provi 94.8 0.11 2.3E-06 47.5 7.6 33 43-77 4-36 (256)
463 PRK03562 glutathione-regulated 94.8 0.12 2.5E-06 54.5 8.7 137 41-209 400-541 (621)
464 PRK06505 enoyl-(acyl carrier p 94.8 1.2 2.7E-05 41.5 14.8 152 42-213 8-186 (271)
465 COG0702 Predicted nucleoside-d 94.8 0.077 1.7E-06 48.8 6.6 74 42-120 1-74 (275)
466 KOG2711 Glycerol-3-phosphate d 94.8 0.42 9E-06 46.1 11.4 123 39-181 19-167 (372)
467 PRK07589 ornithine cyclodeamin 94.7 0.14 3.1E-06 49.9 8.6 71 41-117 129-201 (346)
468 PRK08303 short chain dehydroge 94.7 0.92 2E-05 43.2 14.1 33 42-76 9-41 (305)
469 PRK07411 hypothetical protein; 94.7 0.32 7E-06 48.3 11.2 33 43-77 40-72 (390)
470 smart00859 Semialdhyde_dh Semi 94.7 0.22 4.9E-06 40.6 8.5 71 43-117 1-73 (122)
471 PF07991 IlvN: Acetohydroxy ac 94.7 0.13 2.9E-06 44.5 7.2 65 41-117 4-68 (165)
472 PRK12557 H(2)-dependent methyl 94.7 0.25 5.4E-06 48.2 10.1 55 54-117 32-89 (342)
473 PF03059 NAS: Nicotianamine sy 94.7 0.16 3.5E-06 47.9 8.4 106 38-156 118-228 (276)
474 PRK09424 pntA NAD(P) transhydr 94.7 0.23 4.9E-06 51.0 10.1 125 13-160 143-287 (509)
475 PRK08862 short chain dehydroge 94.7 1.1 2.5E-05 40.6 13.9 114 42-159 6-144 (227)
476 PRK07877 hypothetical protein; 94.6 0.17 3.7E-06 54.0 9.4 74 42-117 108-204 (722)
477 PRK05671 aspartate-semialdehyd 94.6 0.072 1.6E-06 51.8 6.1 71 41-118 4-75 (336)
478 PLN00203 glutamyl-tRNA reducta 94.6 0.21 4.5E-06 51.4 9.7 104 41-164 266-375 (519)
479 PRK01438 murD UDP-N-acetylmura 94.6 0.33 7.2E-06 49.3 11.1 123 42-174 17-146 (480)
480 PRK06436 glycerate dehydrogena 94.6 0.14 2.9E-06 49.2 7.8 95 40-164 121-217 (303)
481 PRK07533 enoyl-(acyl carrier p 94.5 1.9 4.2E-05 39.6 15.4 34 42-77 11-46 (258)
482 PF02882 THF_DHG_CYH_C: Tetrah 94.5 0.19 4.1E-06 43.6 7.9 55 41-120 36-90 (160)
483 KOG4039 Serine/threonine kinas 94.5 0.2 4.4E-06 44.1 8.0 123 20-161 7-134 (238)
484 PRK14106 murD UDP-N-acetylmura 94.4 0.27 5.9E-06 49.4 10.1 123 41-174 5-132 (450)
485 PF13241 NAD_binding_7: Putati 94.4 0.25 5.4E-06 39.3 7.9 63 41-118 7-69 (103)
486 PRK15438 erythronate-4-phospha 94.4 0.16 3.6E-06 50.1 8.1 61 40-117 115-175 (378)
487 PRK08690 enoyl-(acyl carrier p 94.4 4.2 9E-05 37.5 17.6 35 41-77 6-42 (261)
488 PRK13940 glutamyl-tRNA reducta 94.4 0.13 2.8E-06 51.4 7.5 74 40-120 180-253 (414)
489 PF00670 AdoHcyase_NAD: S-aden 94.4 0.1 2.2E-06 45.3 5.9 66 41-119 23-88 (162)
490 PRK00257 erythronate-4-phospha 94.4 0.15 3.3E-06 50.4 7.9 61 40-117 115-175 (381)
491 PRK14027 quinate/shikimate deh 94.4 0.26 5.7E-06 46.7 9.2 75 40-117 126-202 (283)
492 PRK06728 aspartate-semialdehyd 94.3 0.074 1.6E-06 51.9 5.5 71 41-118 5-77 (347)
493 TIGR03736 PRTRC_ThiF PRTRC sys 94.3 0.29 6.4E-06 45.4 9.2 35 42-77 12-55 (244)
494 PLN02306 hydroxypyruvate reduc 94.3 0.28 6.1E-06 48.6 9.6 101 41-158 165-272 (386)
495 PRK00436 argC N-acetyl-gamma-g 94.3 0.12 2.5E-06 50.5 6.8 34 41-75 2-36 (343)
496 PRK09730 putative NAD(P)-bindi 94.2 0.62 1.3E-05 42.0 11.2 32 43-76 3-35 (247)
497 PF00106 adh_short: short chai 94.2 0.6 1.3E-05 39.5 10.5 115 43-161 2-137 (167)
498 PRK14192 bifunctional 5,10-met 94.2 0.14 3E-06 48.6 6.9 76 19-120 138-213 (283)
499 COG1052 LdhA Lactate dehydroge 94.2 0.28 6E-06 47.5 9.1 91 41-158 146-236 (324)
500 PRK06046 alanine dehydrogenase 94.2 0.21 4.4E-06 48.4 8.2 71 41-117 129-201 (326)
No 1
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=8.5e-68 Score=503.75 Aligned_cols=310 Identities=59% Similarity=0.952 Sum_probs=282.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK 122 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~ 122 (353)
||+||||+|+||+++|+.|+.+++++||+|+|++++.|+++||+|......+..+.+.+|++++++|||+||+++|.|++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~ 80 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK 80 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence 79999999999999999999999999999999988889999999977433455422223567899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHh
Q 018618 123 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL 202 (353)
Q Consensus 123 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l 202 (353)
+|++|.|++..|+++++++++.|.+++|++++|++|||+|++++++++++++.+++|++||||+|.||++|+++++|+++
T Consensus 81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l 160 (312)
T TIGR01772 81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK 160 (312)
T ss_pred CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999889999999999999999997799999999999999
Q ss_pred CCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHHhc
Q 018618 203 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282 (353)
Q Consensus 203 ~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~ 282 (353)
|+++++|+++||||||+++++|+||++++...++++++++|.+++++++++|++.++|||+++||+|.++++++++|+++
T Consensus 161 ~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~ia~a~~~iv~ail~~ 240 (312)
T TIGR01772 161 GKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG 240 (312)
T ss_pred CCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCccCCCChhHHHHHHHHHHHHHHHHh
Confidence 99999999999999986699999999986444666668999999999999999976678999999999999999999975
Q ss_pred cCCCCeEEEeeeeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018618 283 LRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 352 (353)
Q Consensus 283 ~~~~~~v~~~~~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~ 352 (353)
..+++.++|+++++|+| .+++|||+||++|++|+++++++++||++|+++|++|++.|++.++.|++|++
T Consensus 241 ~~d~~~v~~~s~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~g~~~~~ 311 (312)
T TIGR01772 241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGALPELKKNIKKGEEFVA 311 (312)
T ss_pred hCCCccEEEEEEEccCCCcCceEEEEEEEEcCCeeEEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44344688988999998 78999999999999999999995489999999999999999999999999986
No 2
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1e-67 Score=502.32 Aligned_cols=309 Identities=68% Similarity=1.075 Sum_probs=281.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 121 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~ 121 (353)
|||+||||+|+||+++|+.|+.+++++||+|+|++.++|+++||+|+.....++.+.+++|++++++|||+||+|+|.|+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 69999999899999999999999999999999998678999999999744456653233566799999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHH
Q 018618 122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 201 (353)
Q Consensus 122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~ 201 (353)
+||++|.|++..|+++++++++.|.+++|++|+|++|||+|++|+++++++++.+++|++||+|+|.||++|+++++|++
T Consensus 81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~ 160 (310)
T cd01337 81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL 160 (310)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998999999999999999999889999999999999
Q ss_pred hCCCCCCCcceEEeec-CCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHH
Q 018618 202 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 280 (353)
Q Consensus 202 l~v~~~~v~~~viG~h-g~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~ 280 (353)
+|+++++|+++||||| |+ +++|+||++.+...++++++++|.+++++++++|++.|.|||+++||+|.++++++++|+
T Consensus 161 l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~~a~a~~~iv~aIl 239 (310)
T cd01337 161 LGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLL 239 (310)
T ss_pred hCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCccCCCCcchhHHHHHHHHHHHHH
Confidence 9999999999999999 78 999999999875456666689999999999999999766789999999999999999999
Q ss_pred hccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018618 281 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFS 351 (353)
Q Consensus 281 ~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 351 (353)
+|+.+++.+++|++++|+-.+++|||+||++|++|+++++++++|+++|+++|++|++.|++.++.|++|+
T Consensus 240 ~~~~~~~~~~~~s~~~~~g~~~v~~s~P~~ig~~Gv~~i~~l~~L~~~E~~~l~~S~~~i~~~~~~g~~~~ 310 (310)
T cd01337 240 RGLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELKKNIEKGVDFV 310 (310)
T ss_pred HhcCCCcceEEEEEEeccCCCceEEEEEEEEeCCeEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 88665556778887766535689999999999999999999525999999999999999999999999884
No 3
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=9.2e-66 Score=491.55 Aligned_cols=317 Identities=78% Similarity=1.198 Sum_probs=288.7
Q ss_pred hhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC
Q 018618 29 RQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT 108 (353)
Q Consensus 29 ~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~ 108 (353)
+-+.||++++.++.||+||||+|+||+++++.|+.++++.||+|+|+++++++++||.|+.....+..+..++|++++++
T Consensus 6 ~~~~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~ 85 (323)
T PLN00106 6 SLRACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALK 85 (323)
T ss_pred hhhccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcC
Confidence 34789999999999999999999999999999999999999999999888889999999876445655445678889999
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeech
Q 018618 109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM 188 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ 188 (353)
|||+||+++|.|+++|++|.|++..|.++++++++.+++++|+++++++|||+|.+++++++++++.+++||+|+||+|.
T Consensus 86 ~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~ 165 (323)
T PLN00106 86 GADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTT 165 (323)
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEec
Confidence 99999999999999999999999999999999999999999999999999999977777777778999999999999988
Q ss_pred hhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchH
Q 018618 189 LDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 268 (353)
Q Consensus 189 ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~ 268 (353)
||++|+++++|+++|+++.+|+++|+|+||+++++|+||++++...++++++++|.+++++++++|++.+.|||+++||+
T Consensus 166 LDs~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~~~ 245 (323)
T PLN00106 166 LDVVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSM 245 (323)
T ss_pred chHHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCccCCCCchHHH
Confidence 99999999999999999999999999999766999999999764446666799999999999999999755689999999
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618 269 AYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ 345 (353)
Q Consensus 269 A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~ 345 (353)
|.++++++++|++++++++.++||++++++|.+++|||+||+||++|+++++++++|+++|+++|++|++.|++.++
T Consensus 246 a~a~~~ii~ail~~~~~~~~v~~~s~~~~~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~ 322 (323)
T PLN00106 246 AYAAARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKGLEALKPELKASIE 322 (323)
T ss_pred HHHHHHHHHHHHhccCCCceEEEEEEECcccCCceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999998776667999998777764349999999999999999999559999999999999999998775
No 4
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=6e-66 Score=485.40 Aligned_cols=297 Identities=38% Similarity=0.584 Sum_probs=270.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+||+|||| |+||+++++.|+..++.+|++|+|+++ ++|.++||.|+.+. ...+.. .+.| +++++|||+||++|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~-~~~~-y~~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKIT-GDGD-YEDLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEe-cCCC-hhhhcCCCEEEEeC
Confidence 59999999 999999999998788888999999996 89999999999753 234443 2245 48899999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHH
Q 018618 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 196 (353)
Q Consensus 118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~ 196 (353)
|.||+|||+|.|++..|+.|++++++++.++|||++++++|||+|++||++ ++.+++|++|+||+ |.||++||++
T Consensus 78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~----~k~sg~p~~rvig~gt~LDsaR~~~ 153 (313)
T COG0039 78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA----MKFSGFPKNRVIGSGTVLDSARFRT 153 (313)
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH----HHhcCCCccceecccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998765 78899999999999 9999999999
Q ss_pred HHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C----CChHHHHHHHHHHhcchhhhhhhhccCCcccchH
Q 018618 197 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 268 (353)
Q Consensus 197 ~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~----~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~ 268 (353)
++|+++|+++++|+++|+|+||+ +++|+||++++.+ + .+++++++|.++++++|++|++.| |.| ++||+
T Consensus 154 ~lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~k-G~~-t~~~~ 230 (313)
T COG0039 154 FLAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGP 230 (313)
T ss_pred HHHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHcc-Ccc-chhhH
Confidence 99999999999999999999999 9999999999753 1 234567899999999999999976 444 99999
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018618 269 AYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346 (353)
Q Consensus 269 A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~ 346 (353)
|.|+++++++|++|++ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++||++|+.|++.|++.++.
T Consensus 231 A~a~a~~~~ail~d~~---~vl~~s~~l~G~yg~~dv~~gvP~~lg~~Gv~~iie~-~l~~~E~~~l~~s~~~lk~~i~~ 306 (313)
T COG0039 231 AAALARMVEAILRDEK---RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQEKLDKSAEELKKNIEL 306 (313)
T ss_pred HHHHHHHHHHHHcCCC---ceEEEEEeecCccCcCCeEEEeeEEEcCCCcEEEecC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999974 588887 899999 88999999999999999999996 99999999999999999999999
Q ss_pred hhhhhc
Q 018618 347 GISFSK 352 (353)
Q Consensus 347 ~~~~~~ 352 (353)
+.++++
T Consensus 307 ~~~~~~ 312 (313)
T COG0039 307 VKELVL 312 (313)
T ss_pred HHHhhc
Confidence 988764
No 5
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-62 Score=470.08 Aligned_cols=313 Identities=61% Similarity=0.968 Sum_probs=280.3
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
-++.||+||||+|+||+++++.|+..+.+.||+|+|++.++++++||.|......+..+....+++++++|||+||+++|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 45679999999899999999999988999999999995589999999998653344433222344689999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHH
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 198 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~l 198 (353)
.++++|++|.+++..|+++++++++.|++++|+++|+++|||+|.+++++.+.+++.+++||+|+||++.||++||++++
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l 165 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV 165 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886544568899999999999779999999999
Q ss_pred HHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHH
Q 018618 199 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 278 (353)
Q Consensus 199 A~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~a 278 (353)
|+++|++|++|+++||||||+.+++|+||++.. .+++++++++.+++++++++|++.|.|||+|+||+|.++++++++
T Consensus 166 a~~l~v~~~~V~~~VlGeHGd~s~v~~~S~~g~--~l~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~g~a~a~~~i~~a 243 (321)
T PTZ00325 166 AEALGMNPYDVNVPVVGGHSGVTIVPLLSQTGL--SLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTS 243 (321)
T ss_pred HHHhCcChhheEEEEEeecCCcccccchhccCC--CCCHHHHHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 999999999999999999998459999999943 466777999999999999999997656799999999999999999
Q ss_pred HHhccCCCCeEEEeeeeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018618 279 CLRGLRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353 (353)
Q Consensus 279 i~~~~~~~~~v~~~~~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 353 (353)
|+++..+++.++++++++|+| .+++|+|+||++|++|+++++++++|+++|+++|++|++.|++.+++|++|++|
T Consensus 244 il~~~~~~~~v~~~~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~~~~~~~~ 319 (321)
T PTZ00325 244 VLKALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVPDLKKNIEKGLEFARK 319 (321)
T ss_pred HHhhcCCCCCeEEEEEEecCCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998754445688888899999 689999999999999999999933999999999999999999999999999986
No 6
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.8e-63 Score=471.78 Aligned_cols=286 Identities=27% Similarity=0.394 Sum_probs=259.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC---CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~---~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
||+|||| |+||+++|+.|+.+++++||+|+|+++ ++|+++||+|.... ..++... +|+ ++++|||+||+|+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~--~~y-~~~~~aDivvita 76 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA--GDY-DDCADADIIVITA 76 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE--CCH-HHhCCCCEEEECC
Confidence 7999999 999999999999999999999999987 79999999997532 2455542 464 8899999999999
Q ss_pred CCCCCCCCC--HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618 118 GVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 194 (353)
Q Consensus 118 g~~~~~g~~--r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~ 194 (353)
|.|++|||+ |.|++..|+++++++++.+.+++|++++|++|||+|++|+++ ++.+|||++|+||+ |.||++||
T Consensus 77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~----~k~sg~p~~rviG~gt~LDs~R~ 152 (307)
T cd05290 77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA----ATEFDYPANKVIGTGTMLDTARL 152 (307)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH----HHHhCcChhheecccchHHHHHH
Confidence 999999999 699999999999999999999999999999999999998765 68889999999999 99999999
Q ss_pred HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-C---------CChHHHHHHHHHHhcchhhhhhhhccCCcc
Q 018618 195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S---------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA 264 (353)
Q Consensus 195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-~---------~~~~~~~el~~~v~~~~~~i~~~~~gkg~~ 264 (353)
++++|+++|+++++|+++|||+||+ +++|+||++++++ + ..+..+++|.+++++++++|++ +||+|
T Consensus 153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~KG~t 228 (307)
T cd05290 153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFN---RKGWT 228 (307)
T ss_pred HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---ccCee
Confidence 9999999999999999999999999 9999999998753 1 1222478999999999999999 67899
Q ss_pred cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018618 265 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342 (353)
Q Consensus 265 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~ 342 (353)
+|++|.++++++++|+.|.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +||++|+++|++|++.|++
T Consensus 229 ~~~ia~a~~~ii~ail~d~~---~v~~vsv~~~G~yg~~~v~~svP~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i~~ 304 (307)
T cd05290 229 NAGIAKSASRLIKAILLDER---SILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEI-PLDEWELEKLHKSAKAIRE 304 (307)
T ss_pred hHHHHHHHHHHHHHHHhCCC---eEEEEEEeeCCccCCCCEEEEEEEEEeCCCceEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999998864 588886 789999 78999999999999999999996 9999999999999999997
Q ss_pred HH
Q 018618 343 SI 344 (353)
Q Consensus 343 ~~ 344 (353)
.+
T Consensus 305 ~~ 306 (307)
T cd05290 305 TI 306 (307)
T ss_pred Hh
Confidence 65
No 7
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-61 Score=463.42 Aligned_cols=310 Identities=56% Similarity=0.880 Sum_probs=278.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
|||+||||+|.||+++++.|.. .+...+++|+|+++ ..++++|+.|......+... ..+|++++++|+|+||+++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~-~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEe-CCCCHHHHcCCCCEEEEcCCC
Confidence 6999999999999999998865 56778999999877 67788999986322334432 235767899999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHH
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVA 199 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA 199 (353)
++++|++|.+++..|+++++++++.|++++|+++++++|||+|++|+++++.+++.+++|++||||+|.||++|+++++|
T Consensus 80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia 159 (312)
T PRK05086 80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA 159 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888899999999999998899999999999
Q ss_pred HHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHH
Q 018618 200 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 279 (353)
Q Consensus 200 ~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai 279 (353)
+++|+++++|+++||||||+++++|+||++ -+.+++++++++|.+++++++++|++.|.|+|+|+||+|.++++++++|
T Consensus 160 ~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k~~~g~t~~~~a~a~~~~v~ai 238 (312)
T PRK05086 160 ELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238 (312)
T ss_pred HHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcccCCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999776999999999 3335777779999999999999999976567999999999999999999
Q ss_pred HhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018618 280 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353 (353)
Q Consensus 280 ~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 353 (353)
++++.+++.++|+++++|+-..++|||+||++|++|+++++++++|+++|+++|++|++.|++.+++|++|+++
T Consensus 239 ~~~~~~~~~v~~~~~~~~~g~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~~~~g~~~~~~ 312 (312)
T PRK05086 239 VRALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312 (312)
T ss_pred HhcCCCCCcEEEEEEEeccCCcceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 98866566699988777653458999999999999999999965999999999999999999999999999975
No 8
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=3.6e-62 Score=467.49 Aligned_cols=295 Identities=27% Similarity=0.393 Sum_probs=262.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC-C-CeEEEEeCCCchhhhhC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALT 108 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~-~-~~v~~~~~t~d~~~al~ 108 (353)
+|.||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.. . ..+.+. ++| +++++
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~ 78 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDP-EEAFK 78 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cCh-HHHhC
Confidence 57899999988999999999999999998 999999954 6999999999873 1 223332 344 58899
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEee
Q 018618 109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV 186 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~ 186 (353)
|||+||++||.|+++||+|.|++..|++++++++++|.+++| ++++|++|||+|++|+++ ++.+ |||++||||+
T Consensus 79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~ 154 (323)
T TIGR01759 79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA----SKNAPDIPPKNFSAM 154 (323)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEe
Confidence 999999999999999999999999999999999999999998 999999999999998775 6778 9999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCCC----C-CChHH--HHHHHHHHhcchhhhhhhh
Q 018618 187 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----S-FTQEE--TEYLTNRIQNGGTEVVEAK 258 (353)
Q Consensus 187 t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~~----~-~~~~~--~~el~~~v~~~~~~i~~~~ 258 (353)
|.||+.|+|+++|+++|++|++|+ .+||||||+ +++|+||++++.+ . ++++. +++|.+++++++++|++
T Consensus 155 t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~-- 231 (323)
T TIGR01759 155 TRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIE-- 231 (323)
T ss_pred eHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHh--
Confidence 999999999999999999999995 669999999 9999999998753 1 33433 68999999999999999
Q ss_pred ccCCcccc-hHHHHHHHHHHHHHhccCCCCeEEEee-eeeC-CC--CCccEEEEEEEEcCCceEEEcc-CCCCCHHHHHH
Q 018618 259 AGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYERIG 332 (353)
Q Consensus 259 ~gkg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~ 332 (353)
+||+++| ++|.++++++++|++|++. +.++|++ +++| +| |+++|||+||++|++|++++++ + +|+++|+++
T Consensus 232 -~kG~t~~~~~a~a~~~iv~ail~~~~~-~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l-~L~~~E~~~ 308 (323)
T TIGR01759 232 -ARGASSAASAANAAIDHVRDWVTGTPE-GDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGL-PLDDFVRGK 308 (323)
T ss_pred -ccCCcchHHHHHHHHHHHHHHHcCCCC-CcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCC-CCCHHHHHH
Confidence 5688999 5779999999999999732 2489998 7899 88 4899999999999999999999 6 999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 018618 333 LEKAKKELAGSIQKG 347 (353)
Q Consensus 333 l~~s~~~l~~~~~~~ 347 (353)
|+.|++.|+++++++
T Consensus 309 l~~sa~~lk~~~~~~ 323 (323)
T TIGR01759 309 LDATEDELLEEKEEA 323 (323)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998764
No 9
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=5.8e-62 Score=464.93 Aligned_cols=291 Identities=24% Similarity=0.340 Sum_probs=261.7
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCC-eEEEEeCCCchhhhhCCCcEEEEc
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~-~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
+.+||+|||| |+||+++++.|+..++++||+|+|+++ ++|+++||+|+.... ..... .++|+ ++++|||+||++
T Consensus 2 ~~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~-~~~dy-~~~~~adivvit 78 (312)
T cd05293 2 PRNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIE-ADKDY-SVTANSKVVIVT 78 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEE-ECCCH-HHhCCCCEEEEC
Confidence 3569999998 999999999999999999999999987 789999999987322 12222 34676 569999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN 195 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~ 195 (353)
+|.++++||+|.|++..|+++++++++.|++++|++++|++|||+|++|+++ ++.+|+|++|+||+ |.||+.|++
T Consensus 79 aG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~k~sg~p~~~viG~gt~Ld~~R~~ 154 (312)
T cd05293 79 AGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYVA----WKLSGLPKHRVIGSGCNLDSARFR 154 (312)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHHH----HHHhCCCHHHEEecCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998654 67789999999999 999999999
Q ss_pred HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618 196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263 (353)
Q Consensus 196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~ 263 (353)
+++|+++++++++|+++|||+||+ +++|+||++++.+ ..+++++++|.+++++++++|++ +||+
T Consensus 155 ~~la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~ 230 (312)
T cd05293 155 YLIAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIK---LKGY 230 (312)
T ss_pred HHHHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHH---hcCC
Confidence 999999999999999999999999 9999999998753 11234589999999999999998 5689
Q ss_pred ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHH
Q 018618 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 340 (353)
Q Consensus 264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l 340 (353)
|+|++|.++++++++|+.+.+ .+++++ +++|.| +++++||+||++|++|+++++++ +|+++|+++|++|++.|
T Consensus 231 t~~~~a~a~~~ii~ail~d~~---~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~i 306 (312)
T cd05293 231 TSWAIGLSVADLVDAILRNTG---RVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIKQ-PLTEEEQEKLQKSADTL 306 (312)
T ss_pred chHHHHHHHHHHHHHHHcCCC---eEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEecC-CCCHHHHHHHHHHHHHH
Confidence 999999999999999998865 577776 789988 58999999999999999999996 99999999999999999
Q ss_pred HHHHH
Q 018618 341 AGSIQ 345 (353)
Q Consensus 341 ~~~~~ 345 (353)
++.++
T Consensus 307 ~~~~~ 311 (312)
T cd05293 307 WEVQK 311 (312)
T ss_pred HHHhh
Confidence 98764
No 10
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=5.6e-62 Score=438.93 Aligned_cols=291 Identities=23% Similarity=0.368 Sum_probs=266.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC---CeEEEEeCCCchhhhhCCCcEEEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLVII 115 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~---~~v~~~~~t~d~~~al~~ADiVIi 115 (353)
..||+|+|+ |+||.+.|+.++.+++.+||+|+|.++ ++|++|||+|...+ +++.. ++|+ .+.+++++||+
T Consensus 20 ~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~---~~Dy-~~sa~S~lvIi 94 (332)
T KOG1495|consen 20 HNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVA---SKDY-SVSANSKLVII 94 (332)
T ss_pred CceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEe---cCcc-cccCCCcEEEE
Confidence 569999999 999999999999999999999999988 89999999998642 34443 4686 77899999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618 116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 194 (353)
Q Consensus 116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~ 194 (353)
|||..+++|++|++++++|+.+++.+.+++.+|.|+++++++|||+|+|||+. |+.+|||++|+||. |+||+.||
T Consensus 95 TAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVDilTYv~----wKLSgfP~nRViGsGcnLDsaRF 170 (332)
T KOG1495|consen 95 TAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVDILTYVT----WKLSGFPKNRVIGSGCNLDSARF 170 (332)
T ss_pred ecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchHHHHHHH----HHHcCCcccceeccCcCccHHHH
Confidence 99999999999999999999999999999999999999999999999998764 89999999999999 99999999
Q ss_pred HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCC
Q 018618 195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAG 262 (353)
Q Consensus 195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg 262 (353)
|+.++++||++|+++++||+||||| +.||+||...+.+ ..+++.|+++.++|...+|+|++. ||
T Consensus 171 ryLi~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayevikl---KG 246 (332)
T KOG1495|consen 171 RYLIGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKL---KG 246 (332)
T ss_pred HHHHHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHh---cC
Confidence 9999999999999999999999999 9999999997632 356678999999999999999995 59
Q ss_pred cccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHH
Q 018618 263 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE 339 (353)
Q Consensus 263 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~ 339 (353)
+|.|++|.++++++++|++|++ .+.|++ .++|.| .+++|+|+||++|++|+..++.. +|+++|.++|.+|++.
T Consensus 247 yTswaIglsva~l~~ail~n~~---~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~-~Lt~~E~akL~kSa~t 322 (332)
T KOG1495|consen 247 YTSWAIGLSVADLAQAILRNLR---RIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQ-KLTDEEVAKLKKSAKT 322 (332)
T ss_pred chHHHHHHHHHHHHHHHHhCcC---ceeeeeeccccccCCCCceEEecceeecCCchhhhhcc-cCCHHHHHHHHHHHHH
Confidence 9999999999999999999987 488887 589998 66999999999999999999996 9999999999999999
Q ss_pred HHHHHHHhhh
Q 018618 340 LAGSIQKGIS 349 (353)
Q Consensus 340 l~~~~~~~~~ 349 (353)
|.+ +|..+.
T Consensus 323 l~~-~q~~l~ 331 (332)
T KOG1495|consen 323 LLE-AQKSLG 331 (332)
T ss_pred HHH-HHHhcC
Confidence 985 555553
No 11
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.7e-61 Score=437.67 Aligned_cols=337 Identities=69% Similarity=1.069 Sum_probs=317.1
Q ss_pred hhhHHHHHhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc
Q 018618 8 NQRIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH 87 (353)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~ 87 (353)
++++.|.++++-+ +...|+....++..||+|.||+|-+|+.+..+|+++++.+++.|||+....|.+.||+|
T Consensus 3 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSH 74 (345)
T KOG1494|consen 3 LKSLIRSSASLSS--------GPKRVFSSGSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSH 74 (345)
T ss_pred hHHHHHhhhhhcc--------CCcccccccccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccc
Confidence 5778888888776 34455666667778999999999999999999999999999999999889999999999
Q ss_pred CCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHH
Q 018618 88 MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPI 167 (353)
Q Consensus 88 ~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~ 167 (353)
.++...+..+.+..++++|+++||+|||.||+||+|||+|+|++..|+.|+++++..+.++||++.+.++|||+|...++
T Consensus 75 I~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVPI 154 (345)
T KOG1494|consen 75 INTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVPI 154 (345)
T ss_pred cCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccchH
Confidence 99888899887778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCC-CCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHH
Q 018618 168 AAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 246 (353)
Q Consensus 168 ~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~-~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~ 246 (353)
+++++++.+.|+|+|++|+|.||..|++.++++.+|++| ++++++|+|+|.+.|++|++|+..+...++++++++|+.+
T Consensus 155 aaevlKk~G~ydpkklfGVTtLDvVRA~tFv~~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~Lt~R 234 (345)
T KOG1494|consen 155 AAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEALTHR 234 (345)
T ss_pred HHHHHHHcCCCCccceeceehhhhhhHHHHHHHHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 5599999999999999999999998888999999999999
Q ss_pred HhcchhhhhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCC
Q 018618 247 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLN 326 (353)
Q Consensus 247 v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~ 326 (353)
++..|.|+.+.|.|+|++.+|+|+|.+++..+++++.+++..++.|+|+....-+-.||+.|+++|++|++++..+++||
T Consensus 235 iQ~gGtEVV~AKaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~~~~~~fFaspv~Lg~~Gv~~v~~l~~ls 314 (345)
T KOG1494|consen 235 IQNGGTEVVKAKAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASPVTELPFFATPVTLGKKGVEEVLGLGKLS 314 (345)
T ss_pred HHhCCceEEEeccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEeccccCccceeceEEecCCceeeecCCCccC
Confidence 99999999999999999999999999999999999998877788999988775467899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018618 327 EYERIGLEKAKKELAGSIQKGISFSK 352 (353)
Q Consensus 327 ~~E~~~l~~s~~~l~~~~~~~~~~~~ 352 (353)
++|++.|+.+..+|++.|++|++|++
T Consensus 315 d~E~~~l~~~~~eLk~sI~KGv~F~~ 340 (345)
T KOG1494|consen 315 DYEEKALEAAKPELKKSIEKGVTFVK 340 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence 99999999999999999999999986
No 12
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=1.8e-61 Score=466.70 Aligned_cols=291 Identities=24% Similarity=0.370 Sum_probs=262.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
+||+|||+ |+||+++++.|+..++++||+|+|+++ ++|+++||+|+... ...+.. .++|+ ++++|||+||+++|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~~dy-~~~~daDiVVitAG 114 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-ASTDY-AVTAGSDLCIVTAG 114 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eCCCH-HHhCCCCEEEECCC
Confidence 59999998 999999999999999999999999988 79999999998632 223332 23565 66999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHH
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF 197 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~ 197 (353)
.|+++|++|.|++..|+++++++++.|+++||++|+|++|||+|++|+++ ++.+|||++||||+ |.||++|++++
T Consensus 115 ~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~----~k~sg~p~~rviG~gt~LDs~R~r~~ 190 (350)
T PLN02602 115 ARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA----WKLSGFPANRVIGSGTNLDSSRFRFL 190 (350)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHHhCCCHHHEEeecchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765 67789999999999 79999999999
Q ss_pred HHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618 198 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 265 (353)
Q Consensus 198 lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~ 265 (353)
+|+++|+++++|+++||||||+ +++|+||.+++.+ .+++++++++.+++++++++|++ +||+|+
T Consensus 191 lA~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~---~KG~t~ 266 (350)
T PLN02602 191 IADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIK---LKGYTS 266 (350)
T ss_pred HHHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHh---cCCccH
Confidence 9999999999999999999998 9999999998632 13334578999999999999999 678999
Q ss_pred chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-C--CccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618 266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-T--ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA 341 (353)
Q Consensus 266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~--~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~ 341 (353)
|++|.++++++++|++|.+ .++|++ +++|+| . +++|+|+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus 267 ~gia~a~a~ii~ail~d~~---~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~l-~L~~~E~~~l~~sa~~l~ 342 (350)
T PLN02602 267 WAIGYSVASLVRSLLRDQR---RIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVNV-HLTDEEAERLRKSAKTLW 342 (350)
T ss_pred HHHHHHHHHHHHHHHhcCC---CeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence 9999999999999999875 588887 689998 3 7899999999999999999996 999999999999999999
Q ss_pred HHHHHh
Q 018618 342 GSIQKG 347 (353)
Q Consensus 342 ~~~~~~ 347 (353)
+.++..
T Consensus 343 ~~~~~~ 348 (350)
T PLN02602 343 EVQSQL 348 (350)
T ss_pred HHHHHh
Confidence 877654
No 13
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=6.4e-61 Score=455.45 Aligned_cols=281 Identities=25% Similarity=0.425 Sum_probs=254.4
Q ss_pred EEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618 46 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPAGVPR 121 (353)
Q Consensus 46 IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~ag~~~ 121 (353)
|||+ |+||+++++.|+..++++||+|+|+++ ++|+++||+|+... ..++.. .+| +++++|||+||+++|.|+
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~daDivVitag~~r 76 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR--SGD-YSDCKDADLVVITAGAPQ 76 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe--cCC-HHHHCCCCEEEECCCCCC
Confidence 6898 999999999999999999999999987 79999999998642 234443 356 488999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHHHH
Q 018618 122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 200 (353)
Q Consensus 122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~lA~ 200 (353)
++||+|.|++..|+++++++++.|++++|++++|++|||+|++|+++ ++.+++|++||||+ |.||+.|+++++|+
T Consensus 77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~~~sg~p~~~viG~gt~LDs~R~~~~la~ 152 (299)
T TIGR01771 77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVA----WKLSGFPKNRVIGSGTVLDTARLRYLLAE 152 (299)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH----HHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998764 67789999999999 89999999999999
Q ss_pred HhCCCCCCCcceEEeecCCCccccccccCCCCC----CC-------ChHHHHHHHHHHhcchhhhhhhhccCCcccchHH
Q 018618 201 VLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----SF-------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 269 (353)
Q Consensus 201 ~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~~-------~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A 269 (353)
++|+++++|+++|||+||+ +++|+||++++.+ .+ .+.++++|.+++++++++|++ +||+++|++|
T Consensus 153 ~l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kG~t~~~~a 228 (299)
T TIGR01771 153 KLGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIIN---RKGATYYGIG 228 (299)
T ss_pred HhCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhh---cCCeeeHHHH
Confidence 9999999999999999999 9999999998743 12 133477999999999999999 6789999999
Q ss_pred HHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018618 270 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342 (353)
Q Consensus 270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~ 342 (353)
.++++++++|++|++ .++||+ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.|++
T Consensus 229 ~a~~~~i~ail~d~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~ik~ 299 (299)
T TIGR01771 229 MAVARIVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEAFQKSAETLKK 299 (299)
T ss_pred HHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCEEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHhC
Confidence 999999999999864 589997 789999 67899999999999999999995 9999999999999999973
No 14
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=2.6e-60 Score=454.60 Aligned_cols=290 Identities=24% Similarity=0.396 Sum_probs=263.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
++||+|||| |.||+++++.|+..++++||+|+|+++ ++|+++||.|+... ..+... ++++ ++++|||+||+++
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~~-~~~~~adivIita 81 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGDY-SDCKDADLVVITA 81 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCCH-HHhCCCCEEEEec
Confidence 459999999 999999999999999999999999987 78999999998632 334443 3454 7899999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHH
Q 018618 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 196 (353)
Q Consensus 118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~ 196 (353)
|.|+++||+|.|++..|+++++++++.+++++|++|+|++|||+|++|+++ ++.+|+|++||||+ |.||+.|+++
T Consensus 82 g~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~~~----~k~sg~p~~~viG~gt~LDs~R~~~ 157 (315)
T PRK00066 82 GAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYAT----WKLSGFPKERVIGSGTSLDSARFRY 157 (315)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHHHH----HHHhCCCHHHEeecCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998764 56789999999999 8999999999
Q ss_pred HHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----------CCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618 197 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 265 (353)
Q Consensus 197 ~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~ 265 (353)
.+|+++|+++++|+++|||+||+ +++|+||++++++ .+++++++++.+++++++++|++ +||++.
T Consensus 158 ~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kg~t~ 233 (315)
T PRK00066 158 MLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIE---KKGATY 233 (315)
T ss_pred HHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHh---cCCeeh
Confidence 99999999999999999999999 9999999998743 24446688999999999999999 568999
Q ss_pred chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018618 266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 343 (353)
Q Consensus 266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~ 343 (353)
|++|.++++++++|+++.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++.
T Consensus 234 ~~~a~~~~~i~~ail~~~~---~v~~~sv~~~g~yg~~~v~~S~Pv~ig~~Gv~~i~~l-~L~~~E~~~L~~s~~~l~~~ 309 (315)
T PRK00066 234 YGIAMALARITKAILNNEN---AVLPVSAYLEGQYGEEDVYIGVPAVVNRNGIREIVEL-PLNDDEKQKFAHSADVLKEI 309 (315)
T ss_pred HHHHHHHHHHHHHHHcCCC---eEEEEEEEeccccCCCCEEEEeEEEEeCCcEEEEcCC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999754 588887 789999 78999999999999999999996 99999999999999999998
Q ss_pred HHH
Q 018618 344 IQK 346 (353)
Q Consensus 344 ~~~ 346 (353)
++.
T Consensus 310 ~~~ 312 (315)
T PRK00066 310 MDE 312 (315)
T ss_pred HHH
Confidence 875
No 15
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-60 Score=456.13 Aligned_cols=297 Identities=22% Similarity=0.299 Sum_probs=262.6
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC-C-CeEEEEeCCCchhhhhC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALT 108 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~-~-~~v~~~~~t~d~~~al~ 108 (353)
.|+||+||||+|+||+++++.|...++++ ||+|+|+++ ++|+++||+|+.. . ..+++. +++ +++++
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-y~~~~ 79 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDP-NVAFK 79 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cCh-HHHhC
Confidence 57899999988999999999999999888 999999954 6899999999862 1 234432 345 58899
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEee
Q 018618 109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV 186 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~ 186 (353)
|||+||+++|.|+++|++|.|++..|+++++++++.|.+|+ |++++|++|||+|++|+++ ++.+ +||++||||+
T Consensus 80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~ 155 (326)
T PRK05442 80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA----MKNAPDLPAENFTAM 155 (326)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH----HHHcCCCCHHHEEee
Confidence 99999999999999999999999999999999999999988 7999999999999999875 5667 9999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCCCcce-EEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhhhh
Q 018618 187 TMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVEAK 258 (353)
Q Consensus 187 t~ld~~R~~~~lA~~l~v~~~~v~~~-viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~~~ 258 (353)
|.||++||++++|++++++|++|+++ ||||||+ +++|+||++++.+ .+++.+ +++|.+++++++++|++
T Consensus 156 t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~-- 232 (326)
T PRK05442 156 TRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIE-- 232 (326)
T ss_pred eHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHh--
Confidence 99999999999999999999999986 5999999 9999999999854 134433 57999999999999999
Q ss_pred ccCCcccchHHHH-HHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618 259 AGAGSATLSMAYA-AVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 334 (353)
Q Consensus 259 ~gkg~~~~s~A~a-~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~ 334 (353)
+||+++|++|.+ +++++++|+++.+. ..++|++ +++|+| |+++|||+||++| +|+++++...+|+++|+++|+
T Consensus 233 -~kG~t~~~~a~~~~~~iv~ail~~~~~-~~i~~~sv~~~g~ygi~~~v~~s~P~~ig-~Gv~~iv~~l~L~~~E~~~l~ 309 (326)
T PRK05442 233 -ARGASSAASAANAAIDHVRDWVLGTPE-GDWVSMGVPSDGSYGIPEGLIFGFPVTCE-NGEYEIVQGLEIDDFSREKID 309 (326)
T ss_pred -CcCCccHHHHHHHHHHHHHHHHhCCCC-CeEEEEEEEecCccCCcCCeEEEEEEEEc-CcEEEEeCCCCCCHHHHHHHH
Confidence 568999999999 59999999998521 2588987 689999 5899999999999 999999663499999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 018618 335 KAKKELAGSIQKGIS 349 (353)
Q Consensus 335 ~s~~~l~~~~~~~~~ 349 (353)
+|++.|+++.+.+..
T Consensus 310 ~s~~~l~~~~~~~~~ 324 (326)
T PRK05442 310 ATLAELEEERDAVKH 324 (326)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887754
No 16
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=1.2e-59 Score=463.10 Aligned_cols=301 Identities=22% Similarity=0.253 Sum_probs=265.2
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhC-------CCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhh
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKIN-------PLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENA 106 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~-------~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~a 106 (353)
-.++.||+||||+|+||+++++.|+.+ ++..||+|+|+++ ++|+++||+|+.+ ...+.+. +.| +++
T Consensus 97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~--~~~-ye~ 173 (444)
T PLN00112 97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG--IDP-YEV 173 (444)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe--cCC-HHH
Confidence 355789999999999999999999998 7777999999988 8999999999873 1234332 345 588
Q ss_pred hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 185 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG 185 (353)
++|||+||+++|.|+++||+|.|++..|+++++++++.|.+ ++|++++|++|||+|++|+++ ++.++++++|+||
T Consensus 174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~----~k~sg~~~~rViG 249 (444)
T PLN00112 174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC----LKNAPNIPAKNFH 249 (444)
T ss_pred hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH----HHHcCCCCcceEE
Confidence 99999999999999999999999999999999999999999 589999999999999998765 6778999999999
Q ss_pred e-chhhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhh
Q 018618 186 V-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVE 256 (353)
Q Consensus 186 ~-t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~ 256 (353)
+ |.||++||++.||+++|+++++| +++||||||+ ++||+||++++++ .+++.+ +++|.+++++++++|++
T Consensus 250 tgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~ 328 (444)
T PLN00112 250 ALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIK 328 (444)
T ss_pred eeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHh
Confidence 9 99999999999999999999999 6699999999 9999999999853 133333 58999999999999998
Q ss_pred hhccCCcccc-hHHHHHHHHHHHHHhccCCCCeEEEee-eeeC-CC--CCccEEEEEEEEcCCceEEEc-cCCCCCHHHH
Q 018618 257 AKAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIF-QLGPLNEYER 330 (353)
Q Consensus 257 ~~~gkg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~-~~~~L~~~E~ 330 (353)
+||++.| ++|.++++++++|+.+.+ ++.++|++ +++| +| ++|++||+||++|++|+++++ ++ +|+++|+
T Consensus 329 ---~kG~t~~~s~a~ai~~~I~ail~~~d-~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el-~L~~~E~ 403 (444)
T PLN00112 329 ---KWGRSSAASTAVSIADAIKSLVTPTP-EGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDV-EIDDYLR 403 (444)
T ss_pred ---ccCchhHHHHHHHHHHHHHHHHcCCC-CCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCC-CCCHHHH
Confidence 5677777 999999999999995443 23699998 7899 48 489999999999999999999 65 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 018618 331 IGLEKAKKELAGSIQKGISFS 351 (353)
Q Consensus 331 ~~l~~s~~~l~~~~~~~~~~~ 351 (353)
++|++|+++|+++.+.+...+
T Consensus 404 ~~l~~Sa~~L~~e~~~~~~~~ 424 (444)
T PLN00112 404 ERIKKSEAELLAEKRCVAHLT 424 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876543
No 17
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=9.5e-60 Score=451.40 Aligned_cols=294 Identities=28% Similarity=0.388 Sum_probs=260.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGM 110 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~A 110 (353)
.||+||||+|+||+++++.|+..++++ +|+|+|+++ +++.++||.|+.. ....... + +.+++++||
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~--~-~~~~~~~~a 77 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--T-DPEEAFKDV 77 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe--c-ChHHHhCCC
Confidence 389999999999999999999999887 599999975 6889999999852 1223332 2 346899999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC-CCCCceEeech
Q 018618 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT-YDPKKLLGVTM 188 (353)
Q Consensus 111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~-~~~~kviG~t~ 188 (353)
|+||++||.|+++|++|.|++..|+++++++++.|++++ |++++|++|||+|++|+++ ++.+| +|++||||+|.
T Consensus 78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~vig~t~ 153 (323)
T cd00704 78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA----LKNAPNLPPKNFTALTR 153 (323)
T ss_pred CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEeeH
Confidence 999999999999999999999999999999999999996 9999999999999998764 67788 59999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCCC----C----ChHH--HHHHHHHHhcchhhhhhh
Q 018618 189 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCS----F----TQEE--TEYLTNRIQNGGTEVVEA 257 (353)
Q Consensus 189 ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~~----~----~~~~--~~el~~~v~~~~~~i~~~ 257 (353)
||++|||+++|++++++|++| .++||||||+ +++|+||++++.+. + .+++ .++|.+++++++++|++
T Consensus 154 LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~- 231 (323)
T cd00704 154 LDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIK- 231 (323)
T ss_pred HHHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHh-
Confidence 999999999999999999999 5689999999 99999999987431 1 2234 57899999999999999
Q ss_pred hccCCcccch-HHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHH
Q 018618 258 KAGAGSATLS-MAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG 332 (353)
Q Consensus 258 ~~gkg~~~~s-~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~ 332 (353)
+||++.|+ +|.++++++++|++|++++ .++||+ +++|+| |+++|||+||+||++|+++++++ +|+++|+++
T Consensus 232 --~kg~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~ 307 (323)
T cd00704 232 --KRGASSAASAAKAIADHVKDWLFGTPPG-EIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDL-KLNDWLREK 307 (323)
T ss_pred --ccCcchhHHHHHHHHHHHHHHHhCCCCC-cEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecCC-CCCHHHHHH
Confidence 56889896 6999999999999998644 489997 789988 47999999999999999999996 999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 018618 333 LEKAKKELAGSIQKGI 348 (353)
Q Consensus 333 l~~s~~~l~~~~~~~~ 348 (353)
|++|++.|+++.+.+|
T Consensus 308 l~~s~~~l~~~~~~~~ 323 (323)
T cd00704 308 LKATEEELIEEKEIAL 323 (323)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999988764
No 18
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=2.3e-59 Score=454.87 Aligned_cols=299 Identities=22% Similarity=0.260 Sum_probs=262.2
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEE--eCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhh
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLY--DVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENAL 107 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~--D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al 107 (353)
.+|.||+||||+|+||+++|+.|+..++++ +|+|+ |+++ ++|+++||.|+.+ ...+... ++| ++++
T Consensus 42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y~~~ 118 (387)
T TIGR01757 42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-YEVF 118 (387)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-HHHh
Confidence 457899999999999999999999999987 67777 6555 7999999999863 1234332 345 5889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
+|||+||+++|.|+++|++|.|++..|+++++++++.|.+++ |++++|++|||+|++|+++ ++.+++|++|+||+
T Consensus 119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~----~k~sg~~~~rviG~ 194 (387)
T TIGR01757 119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA----MKNAPNIPRKNFHA 194 (387)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH----HHHcCCCcccEEEe
Confidence 999999999999999999999999999999999999999988 9999999999999998765 67789999999999
Q ss_pred -chhhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhhh
Q 018618 187 -TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVEA 257 (353)
Q Consensus 187 -t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~~ 257 (353)
|.||++|+|++||+++++++++| +++||||||+ +++|+||++++.+ .+++.+ +++|.+++++++++|++
T Consensus 195 gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~- 272 (387)
T TIGR01757 195 LTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIK- 272 (387)
T ss_pred cchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHh-
Confidence 99999999999999999999999 5999999999 9999999998743 123323 68999999999999998
Q ss_pred hccCCcccc-hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCC-C--CCccEEEEEEEEcCCceEEEc-cCCCCCHHHHH
Q 018618 258 KAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIF-QLGPLNEYERI 331 (353)
Q Consensus 258 ~~gkg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~s~Pv~ig~~Gv~~v~-~~~~L~~~E~~ 331 (353)
+||++.| ++|.++++++++|+.+.+. +.++|++ +++|+ | +++++||+||++|++|+++++ ++ +|+++|++
T Consensus 273 --~KG~t~~~s~a~ai~~~i~ai~~g~d~-~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l-~L~~~E~~ 348 (387)
T TIGR01757 273 --KWGRSSAASTAVSIADAIKSLVVPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDV-SMDDFLRE 348 (387)
T ss_pred --ccCchhHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCC-CCCHHHHH
Confidence 5676776 9999999999999955442 3588997 68996 8 489999999999999999997 75 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 018618 332 GLEKAKKELAGSIQKGISF 350 (353)
Q Consensus 332 ~l~~s~~~l~~~~~~~~~~ 350 (353)
+|++|++.|+++.+.+++.
T Consensus 349 ~l~~Sa~~L~~e~~~~~~~ 367 (387)
T TIGR01757 349 RIRKSEDELLKEKECVAHL 367 (387)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888764
No 19
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=4.5e-59 Score=445.35 Aligned_cols=288 Identities=25% Similarity=0.399 Sum_probs=259.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+||+|||+ |.+|+++++.|+..|+..+|+|+|+++ ++++++||.|... ....... ..++ +++++||+||+++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~--~~~~-~~l~~aDIVIita 76 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK--AGDY-SDCKDADIVVITA 76 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE--cCCH-HHhCCCCEEEEcc
Confidence 38999998 999999999999999888999999987 6889999998753 1233333 2454 6799999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHH
Q 018618 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 196 (353)
Q Consensus 118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~ 196 (353)
|.|+++||+|.|++.+|+++++++++.|++++|++++|++|||+|++|+++ ++.+++|++||||+ |.||++|+++
T Consensus 77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~----~~~~g~p~~~v~g~gt~LDs~R~~~ 152 (306)
T cd05291 77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV----QKLSGLPKNRVIGTGTSLDTARLRR 152 (306)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH----HHHhCcCHHHEeeccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998764 67799999999999 8999999999
Q ss_pred HHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCCcccc
Q 018618 197 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266 (353)
Q Consensus 197 ~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~ 266 (353)
++|+++|+++++|+++|||+||+ +++|+||++++.+ .+.+++++++.+++++++++|++ +||+++|
T Consensus 153 ~la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~---~kg~t~~ 228 (306)
T cd05291 153 ALAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIIN---GKGATYY 228 (306)
T ss_pred HHHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHH---ccCccHH
Confidence 99999999999999999999999 9999999998743 13345588999999999999999 5689999
Q ss_pred hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618 267 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 344 (353)
Q Consensus 267 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~ 344 (353)
++|.++++++++|+++.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++.+
T Consensus 229 ~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~l~~~~ 304 (306)
T cd05291 229 GIATALARIVKAILNDEN---AILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIEL-DLTEEEQEKFEKSADIIKENI 304 (306)
T ss_pred HHHHHHHHHHHHHHcCCC---EEEEEEEEeccccCCCCEEEEEEEEEeCCCEEEEECC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999854 588887 789999 77999999999999999999995 999999999999999999876
Q ss_pred H
Q 018618 345 Q 345 (353)
Q Consensus 345 ~ 345 (353)
+
T Consensus 305 ~ 305 (306)
T cd05291 305 K 305 (306)
T ss_pred h
Confidence 5
No 20
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.8e-58 Score=442.96 Aligned_cols=297 Identities=31% Similarity=0.500 Sum_probs=265.5
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEE
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVI 114 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVI 114 (353)
.+.+||+|||| |+||+++++.++..++ .+|+|+|+++ +.+.++|+.|.... ...+.. .++|++ +++|||+||
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~-~~~d~~-~l~~ADiVV 78 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL-GTNNYE-DIKDSDVVV 78 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEEE-eCCCHH-HhCCCCEEE
Confidence 35569999998 9999999999999887 5899999988 67899999997532 123332 346875 899999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHH
Q 018618 115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR 193 (353)
Q Consensus 115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R 193 (353)
+++|.++++|++|.|++..|.++++++++.|+++||++|+|++|||+|++|+++ ++.+++|++|++|+ |.||++|
T Consensus 79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~----~~~s~~p~~rviG~gt~lds~R 154 (319)
T PTZ00117 79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLDCMVKVF----QEKSGIPSNKICGMAGVLDSSR 154 (319)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHH----HHhhCCCcccEEEecchHHHHH
Confidence 999999999999999999999999999999999999999999999999998654 67789999999999 5999999
Q ss_pred HHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618 194 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263 (353)
Q Consensus 194 ~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~ 263 (353)
+++.+|+++|+++++|+++|+|+||+ +++|+||++++++ .+++++++++.+++++++++|++.+ |||+
T Consensus 155 ~~~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~-~kg~ 232 (319)
T PTZ00117 155 FRCNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLL-KKGS 232 (319)
T ss_pred HHHHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhc-CCCC
Confidence 99999999999999999999999999 9999999998742 2455668899999999999999976 7899
Q ss_pred ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA 341 (353)
Q Consensus 264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~ 341 (353)
+.||+|.++++++++|++|.+ .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++||++|++|+..|+
T Consensus 233 t~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~l~ 308 (319)
T PTZ00117 233 AFFAPAAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNLFVGVPVVIGGKGIEKVIEL-ELNAEEKELFDKSIESIQ 308 (319)
T ss_pred hHHHHHHHHHHHHHHHhcCCC---eEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHH
Confidence 999999999999999999864 589998 789999 46999999999999999999996 999999999999999999
Q ss_pred HHHHHhhh
Q 018618 342 GSIQKGIS 349 (353)
Q Consensus 342 ~~~~~~~~ 349 (353)
+.++....
T Consensus 309 ~~~~~~~~ 316 (319)
T PTZ00117 309 ELTQKAKA 316 (319)
T ss_pred HHHHHHHH
Confidence 98886543
No 21
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=7e-59 Score=442.58 Aligned_cols=286 Identities=29% Similarity=0.421 Sum_probs=258.3
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
|+|||+ |.||+++++.|+..++++||+|+|+++ +.++++||.|.... ...+... ++|+ ++++|||+||+++|.|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~~-~~l~~aDiVIitag~p 77 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGDY-ADAADADIVVITAGAP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCCH-HHhCCCCEEEEcCCCC
Confidence 689999 999999999999999999999999987 78999999998643 2233332 3564 7899999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHHH
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVA 199 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~lA 199 (353)
+++||+|.+++.+|+++++++++.|+++||++|+|++|||+|++|+++ ++++|+|++||+|+ |.||+.|+++.+|
T Consensus 78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d~~~~~~----~~~sg~~~~kviG~gt~lDs~r~~~~la 153 (300)
T cd00300 78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVA----QKLSGLPKNRVIGSGTLLDSARFRSLLA 153 (300)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHHHHHHHH----HHHhCcCHHHEEecCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998754 67789999999999 8999999999999
Q ss_pred HHhCCCCCCCcceEEeecCCCccccccccCCCCC-C----C--ChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHH
Q 018618 200 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----F--TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA 272 (353)
Q Consensus 200 ~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-~----~--~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~ 272 (353)
+++|+++++|+++|+|+||+ +++|+||++++.+ + + +++.+++|.+++++++++|++ +||+++|++|.++
T Consensus 154 ~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~---~kg~t~~~~a~a~ 229 (300)
T cd00300 154 EKLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIR---LKGATNYGIATAI 229 (300)
T ss_pred HHhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHH---ccCcchHHHHHHH
Confidence 99999999999999999999 9999999998753 1 1 234578999999999999998 5689999999999
Q ss_pred HHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618 273 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 344 (353)
Q Consensus 273 ~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~ 344 (353)
++++++|+++.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus 230 ~~~~~ai~~~~~---~v~~~s~~~~g~yg~~~~~~s~Pv~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd00300 230 ADIVKSILLDER---RVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEI-PLTEDEEAKLQKSAEALKEVL 299 (300)
T ss_pred HHHHHHHHcCCC---eEEEEEEEecCccCCCCEEEEEEEEEeCCCeEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999854 588997 689999 78999999999999999999995 999999999999999999765
No 22
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=8.8e-59 Score=444.54 Aligned_cols=295 Identities=22% Similarity=0.305 Sum_probs=262.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT 108 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~ 108 (353)
+|+||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.. ...+++. +.| +++++
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~ 77 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFK 77 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhC
Confidence 46899999988999999999999999999 999999954 6899999999873 1234442 345 58899
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEee
Q 018618 109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV 186 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~ 186 (353)
|||+||+++|.|+++|++|.|++..|+++++++++.|.+++ |++++|++|||+|++|+++ ++.+ ++|++||+|+
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~ViG~ 153 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----MKNAPDIPPDNFTAM 153 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----HHHcCCCChHheEEe
Confidence 99999999999999999999999999999999999999999 5999999999999999775 5677 5999999999
Q ss_pred chhhHHHHHHHHHHHhCCCCCCCcc-eEEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhhhh
Q 018618 187 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVEAK 258 (353)
Q Consensus 187 t~ld~~R~~~~lA~~l~v~~~~v~~-~viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~~~ 258 (353)
|.||+.|+++.+|+++|+++++|++ +|||+||+ +++|+||++++.+ .+.+.+ +++|.+++++++++|++
T Consensus 154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~-- 230 (322)
T cd01338 154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIK-- 230 (322)
T ss_pred hHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHh--
Confidence 9999999999999999999999997 56999998 9999999998743 244443 57999999999999999
Q ss_pred ccCCcccchHH-HHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618 259 AGAGSATLSMA-YAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 334 (353)
Q Consensus 259 ~gkg~~~~s~A-~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~ 334 (353)
+||+++|+++ .++++++++|++|++. ..++|++ +++|+| |+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus 231 -~kG~t~~~~~a~a~~~iv~ail~~~~~-~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~ 307 (322)
T cd01338 231 -ARGASSAASAANAAIDHMRDWVLGTPE-GDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL-EIDDFAREKID 307 (322)
T ss_pred -CcCCccHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeCC-CCCHHHHHHHH
Confidence 5689999999 5999999999999852 2588887 689999 58999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHh
Q 018618 335 KAKKELAGSIQKG 347 (353)
Q Consensus 335 ~s~~~l~~~~~~~ 347 (353)
+|++.|+++.++.
T Consensus 308 ~s~~~l~~~~~~~ 320 (322)
T cd01338 308 ATLAELLEEREAV 320 (322)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988765
No 23
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=8.9e-58 Score=437.93 Aligned_cols=292 Identities=33% Similarity=0.576 Sum_probs=261.7
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII 115 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi 115 (353)
+.+||+|||| |+||+++++.++..++. +|+|+|+++ +.+.++|+.|... ....+.. .++|+ ++++|||+||+
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~-~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~~d~-~~l~~aDiVI~ 80 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNLG-DVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GTNNY-EDIAGSDVVIV 80 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-ECCCH-HHhCCCCEEEE
Confidence 3469999998 99999999999998874 699999988 6788999998742 1223332 34686 68999999999
Q ss_pred cCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chh
Q 018618 116 PAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TML 189 (353)
Q Consensus 116 ~ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~l 189 (353)
++|.++++|+ +|.+++..|+++++++++.|+++||++|+|++|||+|++++.+ ++.+++|++||+|+ |.|
T Consensus 81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~di~t~~~----~~~sg~p~~rviGlgt~l 156 (321)
T PTZ00082 81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLDVMVKLL----QEHSGLPKNKVCGMAGVL 156 (321)
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHhcCCChhhEEEecCcc
Confidence 9999999999 9999999999999999999999999999999999999998764 67889999999999 599
Q ss_pred hHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhc
Q 018618 190 DVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKA 259 (353)
Q Consensus 190 d~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~ 259 (353)
|+.|+++.+|+++|+++++|+++|+|+||+ +++|+||++++.+ .++++++++|.+++++++++|++.+
T Consensus 157 ds~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~~- 234 (321)
T PTZ00082 157 DSSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDLL- 234 (321)
T ss_pred cHHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhhc-
Confidence 999999999999999999999999999999 9999999998743 1455668999999999999999976
Q ss_pred cCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 018618 260 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK 337 (353)
Q Consensus 260 gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~ 337 (353)
|+|+|+||+|.++++++++|++|.+ .++|++ +++|+| .+++|+|+||+||++|+++++++ +||++|+++|++|+
T Consensus 235 gkg~t~~~ia~a~~~i~~ail~d~~---~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~sa 310 (321)
T PTZ00082 235 GTGSAYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDIYMGTPAVIGANGVEKIIEL-DLTPEEQKKFDESI 310 (321)
T ss_pred CCCccHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence 7899999999999999999999865 589997 789999 57999999999999999999996 99999999999999
Q ss_pred HHHHHHHH
Q 018618 338 KELAGSIQ 345 (353)
Q Consensus 338 ~~l~~~~~ 345 (353)
+.|++.++
T Consensus 311 ~~i~~~~~ 318 (321)
T PTZ00082 311 KEVKRLEA 318 (321)
T ss_pred HHHHHHHh
Confidence 99998764
No 24
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=4.9e-58 Score=437.27 Aligned_cols=288 Identities=31% Similarity=0.514 Sum_probs=259.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC----CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~t~d~~~al~~ADiVIi 115 (353)
|||+|||+ |.||+.+|+.++..|+. +|+|+|+++ ..+.++|+.|... ...++ .++|++ ++++||+||+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~---~t~d~~-~~~~aDiVIi 75 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVT---GTNNYA-DTANSDIVVI 75 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEE---ecCCHH-HhCCCCEEEE
Confidence 69999999 99999999999999887 899999987 5677888877542 12333 246774 5899999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618 116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 194 (353)
Q Consensus 116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~ 194 (353)
++|.|+++|++|.|++..|++++++++++|.+++|++++|++|||+|++|+++ ++.+|+|++||||+ |.||+.|+
T Consensus 76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~di~t~~~----~~~sg~~~~rviG~g~~lds~R~ 151 (305)
T TIGR01763 76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLDAMTYVA----WQKSGFPKERVIGQAGVLDSARF 151 (305)
T ss_pred cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHEEEeccchHHHHH
Confidence 99999999999999999999999999999999999999999999999998764 67889999999999 69999999
Q ss_pred HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHH
Q 018618 195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 269 (353)
Q Consensus 195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A 269 (353)
++.+|+++++++++|+++||||||+ +++|+||++++.+ .++++.+++|.+++++++++|++.+ |||++.|++|
T Consensus 152 ~~~la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~a 229 (305)
T TIGR01763 152 RTFIAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL-KQGSAYYAPA 229 (305)
T ss_pred HHHHHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHH
Confidence 9999999999999999999999999 9999999998754 2344558999999999999999976 7899999999
Q ss_pred HHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618 270 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ 345 (353)
Q Consensus 270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~ 345 (353)
.++++++++|++|++ .++|++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.++
T Consensus 230 ~~~~~i~~ai~~~~~---~v~~~s~~~~~~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~i~~~~~ 303 (305)
T TIGR01763 230 ASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KLDQSELALLNKSAKIVDENCK 303 (305)
T ss_pred HHHHHHHHHHhCCCC---eEEEEEEEecccCCCCceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999865 588887 789999 67999999999999999999996 9999999999999999998765
No 25
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=6.5e-57 Score=430.52 Aligned_cols=288 Identities=28% Similarity=0.445 Sum_probs=260.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
|||+|||+ |.||+++++.|+..|+..+++|+|+++ +.+.++|+.|.... ...... ++|+ +++++||+||++++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~--~~d~-~~l~~aDiViita~ 76 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY--AGDY-ADCKGADVVVITAG 76 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe--eCCH-HHhCCCCEEEEccC
Confidence 69999999 999999999999999888999999987 67899999987531 223333 3565 77999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHH
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF 197 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~ 197 (353)
.++++|++|.+++..|+++++++++.+++++|+++++++|||+|++|+++ ++.+|||++||||+ |.||+.|++++
T Consensus 77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~----~~~sg~p~~~viG~gt~LDs~R~~~~ 152 (308)
T cd05292 77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA----YKLSGLPPNRVIGSGTVLDTARFRYL 152 (308)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHeecccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765 57789999999999 89999999999
Q ss_pred HHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618 198 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 265 (353)
Q Consensus 198 lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~ 265 (353)
+|+++++++++|+++|||+||+ +++|+||++++.+ .++++.+++|.+++++++++|++ +||+++
T Consensus 153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~---~kg~t~ 228 (308)
T cd05292 153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIE---RKGATY 228 (308)
T ss_pred HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHH---cCCccH
Confidence 9999999999999999999999 9999999998642 23345688999999999999999 568999
Q ss_pred chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018618 266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 343 (353)
Q Consensus 266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~ 343 (353)
|++|.++++++++|+++.+ .++|++ +++|+| .+++|||+||+||++|+++++++ +||++|+++|++|++.|++.
T Consensus 229 ~~~a~a~~~i~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~~-~L~~~E~~~l~~s~~~i~~~ 304 (308)
T cd05292 229 YAIGLALARIVEAILRDEN---SVLTVSSLLDGQYGIKDVALSLPCIVGRSGVERVLPP-PLSEEEEEALRASAEVLKEA 304 (308)
T ss_pred HHHHHHHHHHHHHHHcCCC---cEEEEEEEEcccCCCCCEEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999864 588987 689999 57999999999999999999996 99999999999999999987
Q ss_pred HH
Q 018618 344 IQ 345 (353)
Q Consensus 344 ~~ 345 (353)
++
T Consensus 305 ~~ 306 (308)
T cd05292 305 IE 306 (308)
T ss_pred Hh
Confidence 75
No 26
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=1.8e-56 Score=428.90 Aligned_cols=296 Identities=24% Similarity=0.325 Sum_probs=254.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV 113 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV 113 (353)
||+||||+|+||+++++.|...++++ +|+|+|+++ ++++++||.|+..... ..+..+++.+++++|||+|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~-~~~~~~~~~~~~~~~aDiV 79 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLL-DGVVPTHDPAVAFTDVDVA 79 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhc-CceeccCChHHHhCCCCEE
Confidence 69999999999999999999988875 799999954 6789999999873211 1122233546899999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhH
Q 018618 114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV 191 (353)
Q Consensus 114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~ 191 (353)
|+++|.|+++|++|.+++..|+++++++++.|.+++ |++++|++|||+|++|+++ ++.++++|.++||+ |.||+
T Consensus 80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~~~sg~~~~~vig~gt~LDs 155 (324)
T TIGR01758 80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL----SNYAPSIPPKNFSALTRLDH 155 (324)
T ss_pred EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCcceEEEeeehHH
Confidence 999999999999999999999999999999999996 9999999999999998765 67777778889999 99999
Q ss_pred HHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCC-C----C----CChHH--HHHHHHHHhcchhhhhhhhc
Q 018618 192 VRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP-C----S----FTQEE--TEYLTNRIQNGGTEVVEAKA 259 (353)
Q Consensus 192 ~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~-~----~----~~~~~--~~el~~~v~~~~~~i~~~~~ 259 (353)
+|+|+++|+++|+++++|+ ++||||||+ +++|+||++++. + + ++++. +++|.+++++++++|++.+
T Consensus 156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k- 233 (324)
T TIGR01758 156 NRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR- 233 (324)
T ss_pred HHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhcc-
Confidence 9999999999999999995 699999999 999999999886 4 1 22222 5789999999999999953
Q ss_pred cCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCC-C--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618 260 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK 335 (353)
Q Consensus 260 gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~ 335 (353)
+|++.|++|.++++++++|+++.. ++.++|++ +++|+ | |+++|||+||++|++|++.+.++ +|+++|+++|++
T Consensus 234 -~~~t~~~ia~~~~~i~~ai~~~~~-~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el-~L~~~E~~~l~~ 310 (324)
T TIGR01758 234 -KLSSALSAAKAAVDQMHDWVLGTP-EGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGL-CVDDSSRKKLAL 310 (324)
T ss_pred -CCCHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCC-CCCHHHHHHHHH
Confidence 358999999999999999995433 23699998 68999 8 48999999999996666666665 999999999999
Q ss_pred HHHHHHHHHHHhh
Q 018618 336 AKKELAGSIQKGI 348 (353)
Q Consensus 336 s~~~l~~~~~~~~ 348 (353)
|++.|++.+++++
T Consensus 311 s~~~lk~~~~~~~ 323 (324)
T TIGR01758 311 TAKELEEERDEAL 323 (324)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998875
No 27
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.5e-56 Score=430.18 Aligned_cols=296 Identities=24% Similarity=0.330 Sum_probs=259.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT 108 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~ 108 (353)
+|.||+||||+|+||+++++.|+..++++ +|+|+|+++ +++.++|+.|+.. ...+.. +++++++++
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~ 77 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK 77 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence 46899999999999999999999988764 999999954 5788899999752 123332 357779999
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHh-CCCCCCceEee
Q 018618 109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGV 186 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~-~~~~~~kviG~ 186 (353)
|||+||++||.+++++++|.+++..|+++++++++.|++++ |++++|++|||+|++|+++ ++. +++|+++ ||+
T Consensus 78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~~~~~~~~~-ig~ 152 (325)
T cd01336 78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL----LKYAPSIPKEN-FTA 152 (325)
T ss_pred CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH----HHHcCCCCHHH-EEe
Confidence 99999999999999999999999999999999999999997 7999999999999998765 565 5787777 888
Q ss_pred -chhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCC----C-C----CChHH--HHHHHHHHhcchhh
Q 018618 187 -TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP----C-S----FTQEE--TEYLTNRIQNGGTE 253 (353)
Q Consensus 187 -t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~----~-~----~~~~~--~~el~~~v~~~~~~ 253 (353)
|.||+.|+++++|+++++++++|+ .+||||||+ +++|+||++++. + + ++++. +++|.+++++++++
T Consensus 153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~ 231 (325)
T cd01336 153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAA 231 (325)
T ss_pred eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHH
Confidence 999999999999999999999996 559999999 999999999885 3 1 22322 58999999999999
Q ss_pred hhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHH
Q 018618 254 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYER 330 (353)
Q Consensus 254 i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~ 330 (353)
|++.+ +|++.||+|.++++++++|++|.+. +.++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+
T Consensus 232 Ii~~~--~g~t~~~~a~~~~~i~~ail~~~~~-~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~~-~L~~~E~ 307 (325)
T cd01336 232 VIKAR--KLSSAMSAAKAICDHVHDWWFGTPE-GEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL-SIDDFSR 307 (325)
T ss_pred HHHcc--ccchHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecCC-CCCHHHH
Confidence 99953 5799999999999999999998532 2588987 689999 48999999999999999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018618 331 IGLEKAKKELAGSIQKGI 348 (353)
Q Consensus 331 ~~l~~s~~~l~~~~~~~~ 348 (353)
++|++|++.|+++++.++
T Consensus 308 ~~l~~s~~~l~~e~~~~~ 325 (325)
T cd01336 308 EKIDATAKELVEEKETAL 325 (325)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999998764
No 28
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=6.2e-55 Score=416.78 Aligned_cols=290 Identities=26% Similarity=0.430 Sum_probs=257.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi 115 (353)
|||+|+||+|.+|++++..|+..|+..+|+|+|+++ +++.++|+.|... ....+.. .++|+ +++++||+||+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~-~~~d~-~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIK-ISSDL-SDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEE-ECCCH-HHhCCCCEEEE
Confidence 699999988999999999999999988999999854 6788899988642 1222332 24565 67999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618 116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 194 (353)
Q Consensus 116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~ 194 (353)
++|.|+++|++|.+++..|+++++++++.|.+++|++++|+++||+|++|+++ ++.+++|++|+||+ |.||+.|+
T Consensus 79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~----~~~~g~~~~~viG~gt~LDs~R~ 154 (309)
T cd05294 79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKA----LKESGFDKNRVFGLGTHLDSLRF 154 (309)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCCHHHEeeccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999998764 67789999999999 79999999
Q ss_pred HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----C--CChHHHHHHHHHHhcchhhhhhhhccCCcccch
Q 018618 195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----S--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS 267 (353)
Q Consensus 195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~--~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s 267 (353)
++.||+++++++++|+++|+|+||+ +++|+||++++.+ . +.+.+++++.+++++++++|++ +||++.||
T Consensus 155 ~~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~---~kg~t~~~ 230 (309)
T cd05294 155 KVAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIIS---LKGGSEYG 230 (309)
T ss_pred HHHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHH---hcCCchhh
Confidence 9999999999999999999999999 9999999998743 1 2244578999999999999999 45788999
Q ss_pred HHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618 268 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 344 (353)
Q Consensus 268 ~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~ 344 (353)
+|.++++++++|++|++ .+++++ +++|+| .+++++|+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus 231 ~a~~~~~ii~ail~~~~---~v~~vsv~~~g~~~~~~~~~~svP~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~i~~~~ 306 (309)
T cd05294 231 PASAISNLVRTIANDER---RILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPI-EMDDDEREAFRKSAEIVKKYT 306 (309)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEEEEECCccCCCCCeEEEeEEEEcCCccEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 588886 688987 34899999999999999999996 999999999999999999876
Q ss_pred H
Q 018618 345 Q 345 (353)
Q Consensus 345 ~ 345 (353)
+
T Consensus 307 ~ 307 (309)
T cd05294 307 R 307 (309)
T ss_pred h
Confidence 5
No 29
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=8.4e-55 Score=414.92 Aligned_cols=287 Identities=34% Similarity=0.576 Sum_probs=256.8
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
|+|||| |.||+.+++.++..++. +|+|+|+++ +++.++|+.|... ....+.. .++|+ ++++|||+||+++|.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~-~t~d~-~~l~dADiVIit~g~ 76 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVT-GTNDY-EDIAGSDVVVITAGI 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE-EcCCH-HHhCCCCEEEEecCC
Confidence 689999 99999999999999888 999999988 6778888887642 1222332 24575 679999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHH
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFV 198 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~l 198 (353)
|+++|++|.+.+.+|++++++++++|++++|++++|++|||+|++|+++ ++++++|++|++|+ |.||+.|+++.+
T Consensus 77 p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~di~t~~~----~~~s~~~~~rviGlgt~lds~r~~~~l 152 (300)
T cd01339 77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVA----YKASGFPRNRVIGMAGVLDSARFRYFI 152 (300)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCHHHEEEecchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765 57789999999999 599999999999
Q ss_pred HHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHH
Q 018618 199 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 273 (353)
Q Consensus 199 A~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~ 273 (353)
|+++++++++|+++|+|+||+ +++|+||++++.+ .++++.++++.+++++++++|++.+ |+|+++|++|.+++
T Consensus 153 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k-~~g~t~~~~a~~~~ 230 (300)
T cd01339 153 AEELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAAIA 230 (300)
T ss_pred HHHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHHHH
Confidence 999999999999999999999 9999999998853 2445568999999999999999976 77999999999999
Q ss_pred HHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618 274 KFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 344 (353)
Q Consensus 274 ~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~ 344 (353)
+++++|+.|++ .++|++ +++|+| .++++||+||++|++|+++++++ +||++|+++|++|++.|++.+
T Consensus 231 ~i~~ail~~~~---~i~~~s~~~~g~yg~~~~~~s~P~~ig~~G~~~~~~l-~l~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd01339 231 EMVEAILKDKK---RVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIEL-DLTDEEKEAFDKSVESVKELI 299 (300)
T ss_pred HHHHHHHcCCC---cEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHh
Confidence 99999999864 588998 789999 56999999999999999999996 999999999999999999765
No 30
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=2.2e-54 Score=413.22 Aligned_cols=292 Identities=32% Similarity=0.561 Sum_probs=260.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
++||+|||| |+||+++++.++..++. +|+|+|+++ +++.++|+.|.... ...+.. .++|+ +++++||+||++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~-~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKIT-GTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEE-eCCCH-HHHCCCCEEEEC
Confidence 479999999 99999999999999887 999999987 67888888876421 122322 34676 679999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN 195 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~ 195 (353)
+|.|+++|++|.+.+.+|+++++++++.|++++|++++|++|||+|++|+++ ++++++|++|++|+ |.||+.|++
T Consensus 78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~----~~~s~~~~~~viG~gt~lds~r~~ 153 (307)
T PRK06223 78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFR 153 (307)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCcccEEEeCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999998765 57789999999999 699999999
Q ss_pred HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHH
Q 018618 196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 270 (353)
Q Consensus 196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~ 270 (353)
+.||+++++++++|+++|+|+||+ +++|+||.+++.+ .++++.+++|.+.+++++++|++.+ +||++.|++|.
T Consensus 154 ~~la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~~-~kg~t~~~~A~ 231 (307)
T PRK06223 154 TFIAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAA 231 (307)
T ss_pred HHHHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhhc-ccCChhHHHHH
Confidence 999999999999999999999999 9999999998743 1455557899999999999999964 57899999999
Q ss_pred HHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018618 271 AAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346 (353)
Q Consensus 271 a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~ 346 (353)
++++++++|+.+.+ .+++++ +++|+| .++++||+||++|++|+++++++ +||++|+++|++|+++|++.++.
T Consensus 232 ~~~~ii~ail~~~~---~~~~~~v~~~g~yg~~~~~~s~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~ 305 (307)
T PRK06223 232 SIAEMVEAILKDKK---RVLPCSAYLEGEYGVKDVYVGVPVKLGKNGVEKIIEL-ELDDEEKAAFDKSVEAVKKLIEA 305 (307)
T ss_pred HHHHHHHHHHcCCC---cEEEEEEEecCcCCCCCeEEEeEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998754 588887 789998 67999999999999999999996 99999999999999999988764
No 31
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.3e-55 Score=430.61 Aligned_cols=295 Identities=16% Similarity=0.129 Sum_probs=255.7
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCC-----cEEEEEeCC--C--cHHHHHHHhcCCCC--CeEEEEeCCCchhhh
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV--N--TPGVTADISHMDTG--AVVRGFLGQPQLENA 106 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~-----~el~L~D~~--~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~a 106 (353)
-.+|.+|+|+||+|++|+++.+.++.++++ ..|+|+|++ . ++|.++||.|+.+. ..+... +++ +++
T Consensus 120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~-~ea 196 (452)
T cd05295 120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDL-DVA 196 (452)
T ss_pred CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECC-HHH
Confidence 345789999999999999999999987543 479999994 3 79999999998731 234443 234 699
Q ss_pred hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC--CcEEEEecCCCCchhHHHHHHHHHhC-CCCCCce
Q 018618 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKL 183 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kv 183 (353)
++|||+||+++|.|+++||+|.|++..|+++++++++.|.+++| ++++|++|||+|++|+++ ++.+ ++|++||
T Consensus 197 ~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~----~k~apgiP~~rV 272 (452)
T cd05295 197 FKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL----IKYAPSIPRKNI 272 (452)
T ss_pred hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHE
Confidence 99999999999999999999999999999999999999999998 889999999999999775 4555 9999999
Q ss_pred EeechhhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCC-------------C----CChHH--HHHH
Q 018618 184 LGVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-------------S----FTQEE--TEYL 243 (353)
Q Consensus 184 iG~t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~-------------~----~~~~~--~~el 243 (353)
+|++.+|++|++++||+++||++++| +++||||||+ ++||+||++++.+ . +.+++ .+++
T Consensus 273 ig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~ 351 (452)
T cd05295 273 IAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEF 351 (452)
T ss_pred EEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHH
Confidence 99966889999999999999999999 6799999999 9999999998742 1 23333 2677
Q ss_pred HHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEc
Q 018618 244 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIF 320 (353)
Q Consensus 244 ~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~ 320 (353)
.+.+++++. + +||++.||+|.|+++++++|++|++.+ .++|++ +++|+| |+|++||+||++|++|++.+.
T Consensus 352 ~~~v~~rg~---~---rkgsT~~siA~A~~~iv~ail~~t~~~-~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~ 424 (452)
T cd05295 352 VATLKSLSS---S---LNHEAAISPAHAIATTLSYWYHGSPPG-EIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVT 424 (452)
T ss_pred HHHHHHHHH---h---ccCChHHHHHHHHHHHHHHHHhCCCCC-eEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEe
Confidence 888888877 2 578999999999999999999997522 588887 789999 689999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018618 321 QLGPLNEYERIGLEKAKKELAGSIQKGI 348 (353)
Q Consensus 321 ~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 348 (353)
.+ +|+++|+++|++|+++|.++.+.++
T Consensus 425 ~L-~L~e~E~~kL~~S~~eL~~E~~~~~ 451 (452)
T cd05295 425 DL-ELSEILREVLKRITSDLIQEKLVAL 451 (452)
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 96 9999999999999999999887653
No 32
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=1.4e-54 Score=412.27 Aligned_cols=272 Identities=22% Similarity=0.321 Sum_probs=241.3
Q ss_pred EEEEEeCCC----cHHHHHHHhcCCC-C-CeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 018618 69 VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC 142 (353)
Q Consensus 69 el~L~D~~~----~~~~~~dl~~~~~-~-~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~ 142 (353)
.|+|+|+++ ++|+++||.|+.. . ..+.. ++|.+++++|||+||+++|.|+++|++|.|++..|++++++++
T Consensus 15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~---~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~ 91 (309)
T PLN00135 15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA 91 (309)
T ss_pred EEEEecCcccccchhhHHHHHHhhhHHhcCCcEe---cCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 899999876 6899999999863 1 23332 3454589999999999999999999999999999999999999
Q ss_pred HHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHHHHHhCCCCCCC-cceEEeecCC
Q 018618 143 EGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAG 219 (353)
Q Consensus 143 ~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~ 219 (353)
+.|.++ +|++++|++|||+|++|+++ ++.+++|++|+||+ |.||++|||+++|+++|+++++| +++||||||+
T Consensus 92 ~~i~~~~~p~aivivvsNPvDv~t~~~----~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~ 167 (309)
T PLN00135 92 SALEKHAAPDCKVLVVANPANTNALIL----KEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS 167 (309)
T ss_pred HHHHHhcCCCeEEEEeCCcHHHHHHHH----HHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC
Confidence 999996 89999999999999998765 67789999999999 99999999999999999999999 7999999999
Q ss_pred CccccccccCCC----CC-C----CChHH--HHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHHhccCCCCe
Q 018618 220 VTILPLLSQVKP----PC-S----FTQEE--TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAG 288 (353)
Q Consensus 220 ~~~vp~~s~~~v----~~-~----~~~~~--~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~ 288 (353)
+++|+||++++ .+ . +.+++ .++|.+++++++++|++. +||+|+||+|.++++++++|+++++ ++.
T Consensus 168 -s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~--~kg~t~~~ia~a~~~iv~ai~~~~~-~~~ 243 (309)
T PLN00135 168 -TQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKA--RKLSSALSAASSACDHIRDWVLGTP-EGT 243 (309)
T ss_pred -ceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHc--cCccHHHHHHHHHHHHHHHHHhCCc-CCe
Confidence 99999999998 43 1 23333 589999999999999995 2679999999999999999998542 235
Q ss_pred EEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018618 289 VVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 352 (353)
Q Consensus 289 v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~ 352 (353)
++|++ +++|+| +++++||+||++|++|++.++++ +|+++|+++|++|++.|+++.+++++.|+
T Consensus 244 v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l-~L~~~E~~~l~~S~~~lk~~~~~~~~~~~ 309 (309)
T PLN00135 244 WVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGL-SIDEFSRKKMDATAKELKEEKELAYSCLS 309 (309)
T ss_pred EEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88997 689999 48999999999999999999896 99999999999999999999999998774
No 33
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=1.5e-53 Score=406.11 Aligned_cols=271 Identities=21% Similarity=0.271 Sum_probs=237.4
Q ss_pred EEEEEeCCC----cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 018618 69 VLHLYDVVN----TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE 143 (353)
Q Consensus 69 el~L~D~~~----~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~ 143 (353)
.|+|+|+++ ++|+++||.|+.+ ....... ++|++++++|||+||+|+|.|+++|++|.|++..|+++++++++
T Consensus 17 ~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~--~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~ 94 (313)
T TIGR01756 17 CLHLLEIPPALNRLEALAMELEDCAFPNLAGTIV--TTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGE 94 (313)
T ss_pred EEEEecCCCccchhHhHHHHHHHhccccCCceEe--cCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence 899999977 6899999999972 1222222 46777899999999999999999999999999999999999999
Q ss_pred HHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHHHHHhCCCCCCCcc-eEEeecCCC
Q 018618 144 GIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGV 220 (353)
Q Consensus 144 ~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~lA~~l~v~~~~v~~-~viG~hg~~ 220 (353)
.|.+++| ++++|++|||+|++|+++. ++.+|+|++ +||+ |.||++||++.+|++++++|++|+. +||||||+
T Consensus 95 ~i~~~a~~~~ivivvtNPvDv~t~v~~---~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG~- 169 (313)
T TIGR01756 95 ALSEYAKPTVKVLVIGNPVNTNCLVAM---LHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAE- 169 (313)
T ss_pred HHHhhCCCCeEEEEeCCchHHHHHHHH---HHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCCC-
Confidence 9999995 5889999999999987642 588999999 9999 9999999999999999999999965 59999999
Q ss_pred ccccccccCCC--CC-C------CChH-HHHHHHHHHhcchhhhhhhhccCCcccchHH-HHHHHHHHHHHhccCCCCeE
Q 018618 221 TILPLLSQVKP--PC-S------FTQE-ETEYLTNRIQNGGTEVVEAKAGAGSATLSMA-YAAVKFADACLRGLRGDAGV 289 (353)
Q Consensus 221 ~~vp~~s~~~v--~~-~------~~~~-~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A-~a~~~li~ai~~~~~~~~~v 289 (353)
+++|+||++++ .+ . ++++ .++++.+++++++++|++ +||+|+|+++ .++++++++|++|++. +.+
T Consensus 170 s~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~t~~~~~a~ai~~iv~ail~~~~~-~~i 245 (313)
T TIGR01756 170 SMVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILE---MRGFTSAASPVKASLQHMKAWLFGTRP-GEV 245 (313)
T ss_pred ceeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHh---CcCCcchHHHHHHHHHHHHHHhcCCCC-CeE
Confidence 99999999988 43 1 2331 368999999999999999 6789999977 6999999999997653 359
Q ss_pred EEee-eee--CCC--CCccEEEEEEEEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018618 290 VECA-FVA--SQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYERIGLEKAKKELAGSIQKGISFS 351 (353)
Q Consensus 290 ~~~~-~~~--g~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 351 (353)
+|++ +++ |+| ++|++||+||++|++|++++++ + +|+++|+++|++|+..|+++.+.+++.|
T Consensus 246 ~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l-~L~~~E~~~l~~Sa~~l~~e~~~~~~~~ 312 (313)
T TIGR01756 246 LSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENF-ELNPWLKTKLAQTEKDLFEERETALKAL 312 (313)
T ss_pred EEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998 575 388 3799999999999999999999 6 9999999999999999999999998765
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=4.1e-50 Score=375.91 Aligned_cols=254 Identities=29% Similarity=0.441 Sum_probs=229.5
Q ss_pred EEEEcCCCCcHHHHHHHHHhCC--CCcEEEEEeCCC--cHHHHHHHhcCCCCC-eEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~--~~~el~L~D~~~--~~~~~~dl~~~~~~~-~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
|+||||+|.+|+++++.|+..+ ...+|+|+|+++ +++.++|++|..... ..+.. .++|++++++|||+||+++|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~-~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS-ITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE-ECCchHHHhCCCCEEEECCC
Confidence 6899998999999999999998 778999999987 788999999886432 23333 35788899999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHH
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 198 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~l 198 (353)
.++++|++|.+++.+|++++++++++|+++||++|+|++|||+|++|+++ ++.+|+|++|+||+|.+|+.|+++.+
T Consensus 80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~----~~~sg~~~~kviG~~~ld~~r~~~~l 155 (263)
T cd00650 80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLV----WRYSGLPKEKVIGLGTLDPIRFRRIL 155 (263)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCchhEEEeecchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998764 67789999999999449999999999
Q ss_pred HHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHH
Q 018618 199 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 278 (353)
Q Consensus 199 A~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~a 278 (353)
|+++|+++++|+++|||+||+ +++|+||+++ +|.++++++++
T Consensus 156 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~-------------------------------------~a~~~~~ii~a 197 (263)
T cd00650 156 AEKLGVDPDDVKVYILGEHGG-SQVPDWSTVR-------------------------------------IATSIADLIRS 197 (263)
T ss_pred HHHhCCCccceEEEEEEcCCC-ceEeccccch-------------------------------------HHHHHHHHHHH
Confidence 999999999999999999999 8999999754 67899999999
Q ss_pred HHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618 279 CLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 344 (353)
Q Consensus 279 i~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~ 344 (353)
|++|.+ .+++++ +++|+| +++++||+||++|++|+++++++ +|+++|+++|+++++.++..+
T Consensus 198 i~~~~~---~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~-~l~~~e~~~l~~s~~~~~~~~ 262 (263)
T cd00650 198 LLNDEG---EILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV-GLTDFELEKLQKSADTLKKEL 262 (263)
T ss_pred HHcCCC---EEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999854 578887 689998 58999999999999999999995 999999999999999999765
No 35
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=9.3e-48 Score=341.60 Aligned_cols=305 Identities=25% Similarity=0.352 Sum_probs=273.9
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCC-----CCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG 109 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~-----~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ 109 (353)
+++.+|.|+||+|++|+++.+.++..- ....++|+|+.+ ++|.+++|+++.+ |.++....++|..++|+|
T Consensus 2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~-PlL~~Vvattd~~~afkd 80 (332)
T KOG1496|consen 2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCAL-PLLKGVVATTDEVEAFKD 80 (332)
T ss_pred CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhh-hHHHhhhcccChhhhhcc
Confidence 357899999999999999999998752 235899999987 6899999999985 555554457888999999
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeech
Q 018618 110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM 188 (353)
Q Consensus 110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ 188 (353)
.|+.|+.+++||++||+|.|++..|+.|++..+..+++|+ |+++|++++||+|..+.++. +.++.+|.+++-.+|.
T Consensus 81 v~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~---k~ApsIP~kNfs~lTR 157 (332)
T KOG1496|consen 81 VDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILK---KFAPSIPEKNFSALTR 157 (332)
T ss_pred CcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHh---hhCCCCchhcchhhhh
Confidence 9999999999999999999999999999999999999999 89999999999999987764 5678999999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCC---------CCChHHH--HHHHHHHhcchhhhhh
Q 018618 189 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC---------SFTQEET--EYLTNRIQNGGTEVVE 256 (353)
Q Consensus 189 ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~---------~~~~~~~--~el~~~v~~~~~~i~~ 256 (353)
||++|+..++|.++||+.++| ++.|||+|+. |++|+..++++.. -++|+.| .++...|++||..+++
T Consensus 158 LDhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ 236 (332)
T KOG1496|consen 158 LDHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIK 236 (332)
T ss_pred hchhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhh
Confidence 999999999999999999999 8999999999 9999999999842 2566667 6899999999999999
Q ss_pred hhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHH
Q 018618 257 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL 333 (353)
Q Consensus 257 ~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l 333 (353)
.+ |-++.+|.|.+++++++.|+.+++.+. +++++ +.+|.| |++..||+||++ ++|-|++++..+++++-++++
T Consensus 237 ar--k~SSA~SaA~aacDhi~dw~~gTpeG~-fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km 312 (332)
T KOG1496|consen 237 AR--KLSSAMSAAKAACDHIRDWWFGTPEGT-FVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKM 312 (332)
T ss_pred hh--hhhhhhhHHHhHhhhhhheecCCCCcc-EEEEeeecCCCCCCCCCeEEEcceEe-cCCceEEEcCcchhHHHHHhh
Confidence 75 468899999999999999999998654 66665 789999 889999999999 689999999889999999999
Q ss_pred HHHHHHHHHHHHHhhhhhc
Q 018618 334 EKAKKELAGSIQKGISFSK 352 (353)
Q Consensus 334 ~~s~~~l~~~~~~~~~~~~ 352 (353)
..++++|+++.+.++.+++
T Consensus 313 ~~t~~EL~eEkd~a~~~l~ 331 (332)
T KOG1496|consen 313 DLTAKELKEEKDLAYSCLS 331 (332)
T ss_pred hhhHHHHHHhHHHHHHhhc
Confidence 9999999999999998775
No 36
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=100.00 E-value=2e-33 Score=247.47 Aligned_cols=159 Identities=35% Similarity=0.570 Sum_probs=145.1
Q ss_pred chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCC-----------CCCChHHHHHHHHHHhcchhhhh
Q 018618 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP-----------CSFTQEETEYLTNRIQNGGTEVV 255 (353)
Q Consensus 187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~-----------~~~~~~~~~el~~~v~~~~~~i~ 255 (353)
|.||++|+++++|+++|++|.+++++|||+||+ +++|+||++++. ..++++++++|.+++++++++|+
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii 79 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII 79 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence 689999999999999999999999999999999 999999999874 24667778999999999999999
Q ss_pred hhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-C-Cc-cEEEEEEEEcCCceEEEccCCCCCHHHHH
Q 018618 256 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-T-EL-PFFASKVRLGRQGAEEIFQLGPLNEYERI 331 (353)
Q Consensus 256 ~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~-~~-~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~ 331 (353)
+.| + |+++||+|.|+++++++|++|.+ .++|++ +.+|+| . ++ +|||+||++|++|++++++.++||++|++
T Consensus 80 ~~k-~-g~t~~s~A~a~~~~v~ail~~~~---~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~ 154 (174)
T PF02866_consen 80 KAK-G-GSTSYSIAAAAARIVEAILKDER---RILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQE 154 (174)
T ss_dssp HHH-S-SSCHHHHHHHHHHHHHHHHTTHT---EEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHH
T ss_pred eec-c-ccCcCCHHHHHHHHHHHHhhccc---ccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHH
Confidence 965 2 89999999999999999999985 588887 689999 3 34 99999999999999999994499999999
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 018618 332 GLEKAKKELAGSIQKGISFS 351 (353)
Q Consensus 332 ~l~~s~~~l~~~~~~~~~~~ 351 (353)
+|++|++.|++.++.+++|+
T Consensus 155 ~l~~sa~~l~~~i~~~~~f~ 174 (174)
T PF02866_consen 155 KLKESAKELKKEIEKGLEFV 174 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999985
No 37
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=99.97 E-value=5.4e-32 Score=230.31 Aligned_cols=139 Identities=38% Similarity=0.602 Sum_probs=123.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
|||+||||+|.||+++++.|+++++++||+|+|+++ ++|+++||+|+...........+.+ +++++|||+||+++|.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-~~~~~~aDivvitag~ 79 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-YEALKDADIVVITAGV 79 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-GGGGTTESEEEETTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-ccccccccEEEEeccc
Confidence 799999999999999999999999999999999996 8999999999864332222222344 6899999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 185 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG 185 (353)
++++|++|.+++..|+++++++++++.+++|+++++++|||+|++|++ +++.+++|++|+||
T Consensus 80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~----~~~~s~~~~~kviG 141 (141)
T PF00056_consen 80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYV----AQKYSGFPPNKVIG 141 (141)
T ss_dssp SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHH----HHHHHTSSGGGEEE
T ss_pred cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHH----HHHhhCcCcccCcC
Confidence 999999999999999999999999999999999999999999999765 47888999999998
No 38
>PRK15076 alpha-galactosidase; Provisional
Probab=99.97 E-value=2.5e-29 Score=249.74 Aligned_cols=291 Identities=17% Similarity=0.154 Sum_probs=196.5
Q ss_pred CCeEEEEcCCCCcHHHHHH--HHH-hCCCC-cEEEEEeCCC--cH-HHHHHHhcCC--CCCeEEEEeCCCchhhhhCCCc
Q 018618 41 GFKVAILGAAGGIGQPLAM--LMK-INPLV-SVLHLYDVVN--TP-GVTADISHMD--TGAVVRGFLGQPQLENALTGMD 111 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~--~l~-~~~~~-~el~L~D~~~--~~-~~~~dl~~~~--~~~~v~~~~~t~d~~~al~~AD 111 (353)
++||+|||| |++|++.++ .++ ..++. .||+|+|+++ ++ +.++ +.+.. .....+.. .++|+++|++|||
T Consensus 1 ~~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l-~~~~~~~~~~~~~i~-~ttD~~eal~dAD 77 (431)
T PRK15076 1 MPKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIV-ARKLAESLGASAKIT-ATTDRREALQGAD 77 (431)
T ss_pred CcEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHH-HHHHHHhcCCCeEEE-EECCHHHHhCCCC
Confidence 369999999 999999877 665 34454 4999999987 32 3333 33321 12233433 3578889999999
Q ss_pred EEEEcCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHH
Q 018618 112 LVIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA 168 (353)
Q Consensus 112 iVIi~ag~~-~~~g--------------~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~ 168 (353)
+||++++.+ ++++ ++|.+. +.+|+++++++++.|+++||+||+|++|||++++|+.+
T Consensus 78 fVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~divt~~~ 157 (431)
T PRK15076 78 YVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMAMNTWAM 157 (431)
T ss_pred EEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH
Confidence 999998876 3434 445565 89999999999999999999999999999999998653
Q ss_pred HHHHHHhCCCCCCceEeec--hhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------Ccccccccc---C----
Q 018618 169 AEVFKKAGTYDPKKLLGVT--MLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ---V---- 229 (353)
Q Consensus 169 ~~~~~~~~~~~~~kviG~t--~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~---------~~~vp~~s~---~---- 229 (353)
+ ++|+.||||+| .+++. +.+|+.+|+++++|++++.| ||.. ++.+|.+.. .
T Consensus 158 ----~---~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH~~W~~~~~~~G~D~~p~l~~~~~~~~~~ 227 (431)
T PRK15076 158 ----N---RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINHMAWYLELERKGEDLYPELRAAAAEGQTR 227 (431)
T ss_pred ----h---cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecchhhheeeeECCcchHHHHHHHHhccCch
Confidence 3 67889999997 45553 88999999999999999999 4443 234442111 0
Q ss_pred ---CC-----------CC-----------CC----ChHHHHHHH----HHHh------cchhhhh-hhhccCCcccchHH
Q 018618 230 ---KP-----------PC-----------SF----TQEETEYLT----NRIQ------NGGTEVV-EAKAGAGSATLSMA 269 (353)
Q Consensus 230 ---~v-----------~~-----------~~----~~~~~~el~----~~v~------~~~~~i~-~~~~gkg~~~~s~A 269 (353)
.+ +. .+ .++..+++. +..+ ....+.. +.+.++....-..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (431)
T PRK15076 228 CQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAERIEIKRSR 307 (431)
T ss_pred hcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCCccccccch
Confidence 01 00 11 222222221 1111 0111111 11111111001135
Q ss_pred HHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618 270 YAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ 345 (353)
Q Consensus 270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~ 345 (353)
..+++++++|.+|.+ .++.+. -++|.+ |+|.++++||.++++|+.++.. ++|++..++++..-...-+-.++
T Consensus 308 e~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~~e~l~ve 383 (431)
T PRK15076 308 EYASTIIEAIETGEP---SVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNINVQELTVE 383 (431)
T ss_pred HHHHHHHHHHhcCCc---eEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 789999999998876 244444 578875 8899999999999999999877 59999999988776555444444
Q ss_pred Hhh
Q 018618 346 KGI 348 (353)
Q Consensus 346 ~~~ 348 (353)
.++
T Consensus 384 Aa~ 386 (431)
T PRK15076 384 AAL 386 (431)
T ss_pred HHH
Confidence 443
No 39
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.97 E-value=8.2e-29 Score=245.36 Aligned_cols=284 Identities=21% Similarity=0.216 Sum_probs=191.0
Q ss_pred CeEEEEcCCCCc-HHHHHHHHHhCC--C-CcEEEEEeCCC-cHH----HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcE
Q 018618 42 FKVAILGAAGGI-GQPLAMLMKINP--L-VSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLGQPQLENALTGMDL 112 (353)
Q Consensus 42 ~KI~IiGa~G~v-G~~la~~l~~~~--~-~~el~L~D~~~-~~~----~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADi 112 (353)
|||+|||| |+. ...+...|+... + .+||+|+|+++ ... .+..+.+.. +..++.. .|+|+++|++||||
T Consensus 1 ~KI~iIGg-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~-g~~~~v~-~ttD~~~Al~gADf 77 (425)
T cd05197 1 VKIAIIGG-GSSFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEV-GADIKFE-KTMDLEDAIIDADF 77 (425)
T ss_pred CEEEEECC-chHhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCCE
Confidence 69999999 743 112233444433 3 58999999988 222 223333222 3445554 36899999999999
Q ss_pred EEEcC---CC---------CCCCCC--------CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHH
Q 018618 113 VIIPA---GV---------PRKPGM--------TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF 172 (353)
Q Consensus 113 VIi~a---g~---------~~~~g~--------~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~ 172 (353)
||.+. |. |.++|. -......+|++++.++++.|+++||+||+|++|||++++|+++
T Consensus 78 Vi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~di~t~a~---- 153 (425)
T cd05197 78 VINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAGEVTEAV---- 153 (425)
T ss_pred EEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHH----
Confidence 99974 22 223332 2456678999999999999999999999999999999998765
Q ss_pred HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCCCccccccccCCC--------------------
Q 018618 173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAGVTILPLLSQVKP-------------------- 231 (353)
Q Consensus 173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~~~~vp~~s~~~v-------------------- 231 (353)
++. +|+.|+||+|.. +.|+++.+|+.+|+++++|+++++| ||+. .||..++
T Consensus 154 ~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg~-----~~s~~~~~G~~l~p~l~~~~~~~~~~~ 225 (425)
T cd05197 154 RRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHGI-----WLNRVRYNGGDVTPKLDEWVEEKSKDW 225 (425)
T ss_pred HHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCeE-----eeEeEEECCeecHHHHHHHHhccCccc
Confidence 455 378899999876 8899999999999999999999999 9974 2222211
Q ss_pred ------------------------CC----C--CCh----H-------------H---H-HHHHHHHhcch--hhhhhhh
Q 018618 232 ------------------------PC----S--FTQ----E-------------E---T-EYLTNRIQNGG--TEVVEAK 258 (353)
Q Consensus 232 ------------------------~~----~--~~~----~-------------~---~-~el~~~v~~~~--~~i~~~~ 258 (353)
+. . ..+ + . + +++.+..+... ....+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~- 304 (425)
T cd05197 226 KTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSVVEL- 304 (425)
T ss_pred cccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCChhhh-
Confidence 00 0 000 0 0 0 11212111100 000000
Q ss_pred ccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618 259 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 334 (353)
Q Consensus 259 ~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~ 334 (353)
..++...| +..+++++++|.+|++. ++.+. .++|.+ |++.++++||+++++|+.++.. ++|++..++++.
T Consensus 305 ~~r~~~~~--~e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~Li~ 378 (425)
T cd05197 305 IKRGGRKY--SEAAIPLIRALLNDNGA---RFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKGLLR 378 (425)
T ss_pred hhcCCccc--HHHHHHHHHHHHcCCCe---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHHHHH
Confidence 01123334 57889999999998763 44444 578875 8899999999999999999876 599998888777
Q ss_pred HHHHHHHHHHHHh
Q 018618 335 KAKKELAGSIQKG 347 (353)
Q Consensus 335 ~s~~~l~~~~~~~ 347 (353)
.-...-+-.++.+
T Consensus 379 ~~~~~e~l~veAa 391 (425)
T cd05197 379 QRKMRERLALEAF 391 (425)
T ss_pred HHHHHHHHHHHHH
Confidence 6554444444444
No 40
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.97 E-value=1.6e-28 Score=242.98 Aligned_cols=286 Identities=19% Similarity=0.216 Sum_probs=192.2
Q ss_pred CeEEEEcCCCCcHH-HHHHHHHhC-C-C-CcEEEEEeCC-C--cH---HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCc
Q 018618 42 FKVAILGAAGGIGQ-PLAMLMKIN-P-L-VSVLHLYDVV-N--TP---GVTADISHMDTGAVVRGFLGQPQLENALTGMD 111 (353)
Q Consensus 42 ~KI~IiGa~G~vG~-~la~~l~~~-~-~-~~el~L~D~~-~--~~---~~~~dl~~~~~~~~v~~~~~t~d~~~al~~AD 111 (353)
|||+|||| |++-. .+...|+.. . + .+||+|+|++ + +. ..+.++.... .+.+++. .|+|+++|++|||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~-~~~~~v~-~t~d~~~al~gad 77 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKA-GLPIKVH-LTTDRREALEGAD 77 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCC
Confidence 69999999 75411 223344442 2 3 5899999999 5 21 1122232222 2344543 3689999999999
Q ss_pred EEEEcCCCCCCCCCCHH--------------------HHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHH
Q 018618 112 LVIIPAGVPRKPGMTRD--------------------DLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 171 (353)
Q Consensus 112 iVIi~ag~~~~~g~~r~--------------------~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~ 171 (353)
+||++.+.+..+++++. ....+|+++++++++.|+++||+||+|++|||++++|+.+
T Consensus 78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~ivt~a~--- 154 (419)
T cd05296 78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAGIVTEAV--- 154 (419)
T ss_pred EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH---
Confidence 99999776554444333 3478999999999999999999999999999999997654
Q ss_pred HHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------Cccccccc--------------
Q 018618 172 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLS-------------- 227 (353)
Q Consensus 172 ~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~---------~~~vp~~s-------------- 227 (353)
++.+ +.|+||+|..+ .|+++.+|+.+|+++++|+++++| ||.. ++.+|.+-
T Consensus 155 -~k~~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~ 229 (419)
T cd05296 155 -LRHT---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHLGWLRRVLLDGEDVLPELLEDLAALLSFEEGLL 229 (419)
T ss_pred -HHhc---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccceeeeeeeECCcccHHHHHHHhhhccccccccc
Confidence 5554 68999999775 799999999999999999999999 7765 24455211
Q ss_pred --cC------CCCC-----C-CChHHH------------------HHHHHHHhcch----hhhhhhhccCCcccchHHHH
Q 018618 228 --QV------KPPC-----S-FTQEET------------------EYLTNRIQNGG----TEVVEAKAGAGSATLSMAYA 271 (353)
Q Consensus 228 --~~------~v~~-----~-~~~~~~------------------~el~~~v~~~~----~~i~~~~~gkg~~~~s~A~a 271 (353)
.. .++. . +.++.+ .++.+..+... .+-+. .++...| +..
T Consensus 230 ~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~---~r~g~~y--~e~ 304 (419)
T cd05296 230 FGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELE---KRGGAGY--SEA 304 (419)
T ss_pred hHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhH---hhcCcch--HHH
Confidence 00 0011 0 111111 12212222110 11111 1233334 578
Q ss_pred HHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018618 272 AVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG 347 (353)
Q Consensus 272 ~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 347 (353)
+++++++|.++++. ++.+. -++|.+ |++.++++||.++++|+.++.. ++|++..++++..-...=+-.++.+
T Consensus 305 a~~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~~e~l~veAa 380 (419)
T cd05296 305 ALALISAIYNDKGD---IHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKAYERLTIEAA 380 (419)
T ss_pred HHHHHHHHhcCCCc---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999988763 44344 578875 8899999999999999999876 6999998888766544433334443
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.96 E-value=7.3e-27 Score=231.87 Aligned_cols=291 Identities=19% Similarity=0.233 Sum_probs=191.8
Q ss_pred CeEEEEcCCCCc-HHHHHHHHHhC--CC-CcEEEEEeCCC-cHH----HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcE
Q 018618 42 FKVAILGAAGGI-GQPLAMLMKIN--PL-VSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLGQPQLENALTGMDL 112 (353)
Q Consensus 42 ~KI~IiGa~G~v-G~~la~~l~~~--~~-~~el~L~D~~~-~~~----~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADi 112 (353)
|||+|||| |++ +..+...|++. .+ .++|+|+|+++ ... .+..+.+.. +..+++. .|+|+++|++||||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~-g~~~~v~-~Ttdr~eAl~gADf 77 (437)
T cd05298 1 FKIVIAGG-GSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKEN-YPEIKFV-YTTDPEEAFTDADF 77 (437)
T ss_pred CeEEEECC-cHHHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EECCHHHHhCCCCE
Confidence 79999999 743 11223344444 24 48999999998 222 223332222 2345554 36899999999999
Q ss_pred EEEcC---CC---------CCCCCC--------CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHH
Q 018618 113 VIIPA---GV---------PRKPGM--------TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF 172 (353)
Q Consensus 113 VIi~a---g~---------~~~~g~--------~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~ 172 (353)
||.+. |. |.++|. -......+|++++.++++.|+++||+||+|++|||++++|+.+
T Consensus 78 Vi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~~vt~~~---- 153 (437)
T cd05298 78 VFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEAL---- 153 (437)
T ss_pred EEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----
Confidence 99974 22 223332 2455778999999999999999999999999999999998654
Q ss_pred HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC----------Ccccccccc-------------
Q 018618 173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG----------VTILPLLSQ------------- 228 (353)
Q Consensus 173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~----------~~~vp~~s~------------- 228 (353)
++. +|+.|+||+|+.... ++..+|+.+|+++++++..+.| ||.. ++.+|.+..
T Consensus 154 ~~~--~~~~kviGlC~~~~~-~~~~la~~lg~~~~~v~~~~~GlNH~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~~~~ 230 (437)
T cd05298 154 RRL--FPNARILNICDMPIA-IMDSMAAILGLDRKDLEPDYFGLNHFGWFTKIYDKQGEDLLPKLREHVKENGYLPPDSD 230 (437)
T ss_pred HHH--CCCCCEEEECCcHHH-HHHHHHHHhCCCHHHceEEEEeecchhhhhheEECCCCchHHHHHHHHhccCCCccccc
Confidence 444 778999999987754 7899999999999999999988 3332 134443210
Q ss_pred -C---C-------------------CCCC-----C-ChHHHHH--------------HHHHHhcchhhhhhhhccC--Cc
Q 018618 229 -V---K-------------------PPCS-----F-TQEETEY--------------LTNRIQNGGTEVVEAKAGA--GS 263 (353)
Q Consensus 229 -~---~-------------------v~~~-----~-~~~~~~e--------------l~~~v~~~~~~i~~~~~gk--g~ 263 (353)
. . +++. + .++..++ ..++..+...++.. .++ ..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~--~~~~~~~ 308 (437)
T cd05298 231 EEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIE--TGTAEGS 308 (437)
T ss_pred ccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhh--cCChhhh
Confidence 0 0 1110 0 1110011 11111000000000 000 00
Q ss_pred ccc--hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 018618 264 ATL--SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK 337 (353)
Q Consensus 264 ~~~--s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~ 337 (353)
... ..|.++++++++|++|.+ .+++++ .++|.| ++|+++|+||+||++|+.++.- ++|++...+++..-.
T Consensus 309 ~~~~~~ya~~a~~ii~aI~~d~~---~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~~~~~ 384 (437)
T cd05298 309 TFHVDVHGEYIVDLAASIAYNTK---ERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLMEQQV 384 (437)
T ss_pred hhhccchHHHHHHHHHHHHcCCC---eEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHHHHHH
Confidence 010 136789999999999865 477776 678887 6799999999999999999877 699999988877655
Q ss_pred HHHHHHHHHhh
Q 018618 338 KELAGSIQKGI 348 (353)
Q Consensus 338 ~~l~~~~~~~~ 348 (353)
..-+-.++.++
T Consensus 385 ~~e~l~veAa~ 395 (437)
T cd05298 385 AYEKLLVEAYL 395 (437)
T ss_pred HHHHHHHHHHH
Confidence 55444444443
No 42
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.94 E-value=2.7e-25 Score=221.12 Aligned_cols=289 Identities=17% Similarity=0.143 Sum_probs=195.1
Q ss_pred CeEEEEcCCCCcHHHHHH--HHHhC-CC-CcEEEEEeCCC--cHHHHHHHhcCC--CCCeEEEEeCCCchhhhhCCCcEE
Q 018618 42 FKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMDLV 113 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~--~l~~~-~~-~~el~L~D~~~--~~~~~~dl~~~~--~~~~v~~~~~t~d~~~al~~ADiV 113 (353)
+||+|||| |++|++.+. .++.. .. ..+|+|+|+++ ++....++.+.. .....+.. .++|+++|++|||+|
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~-~ttD~~eal~~AD~V 78 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIE-ATTDRREALDGADFV 78 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE-EeCCHHHHhcCCCEE
Confidence 59999999 999999877 45433 33 24999999987 444444443321 11223332 357888999999999
Q ss_pred EEcCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHH
Q 018618 114 IIPAGVPRKPGMTR----------------------DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 171 (353)
Q Consensus 114 Ii~ag~~~~~g~~r----------------------~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~ 171 (353)
|++++....++.++ .....+|++++.++++.+.++||++|++++|||++++|+++
T Consensus 79 i~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~i~t~~~--- 155 (423)
T cd05297 79 INTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMAELTWAL--- 155 (423)
T ss_pred EEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHHHHHHHH---
Confidence 99987544443333 45678999999999999999999999999999999998654
Q ss_pred HHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------Ccccccccc-----------CC
Q 018618 172 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ-----------VK 230 (353)
Q Consensus 172 ~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~---------~~~vp~~s~-----------~~ 230 (353)
++.++ .|++|+|+. +.++++.+|+.+|+++++|+++++| ||.. ++.+|.+.. ..
T Consensus 156 -~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~~ 230 (423)
T cd05297 156 -NRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHMAWLLKFEYNGEDLYPLLDEWIEEGSEEWDQLS 230 (423)
T ss_pred -HHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccHhhhhhheECCcchHHHHHHHHhccCccchhcc
Confidence 56554 799999865 6789999999999999999999999 4433 234443111 11
Q ss_pred -CC-----------C-------C------CChHHHHH------------------HHHHHhcchhhhhhh--hccCCccc
Q 018618 231 -PP-----------C-------S------FTQEETEY------------------LTNRIQNGGTEVVEA--KAGAGSAT 265 (353)
Q Consensus 231 -v~-----------~-------~------~~~~~~~e------------------l~~~v~~~~~~i~~~--~~gkg~~~ 265 (353)
++ . . ..++.... +........ ..+. ....+...
T Consensus 231 ~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 308 (423)
T cd05297 231 PVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLI--LAEIDKEELDPVKR 308 (423)
T ss_pred cchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhc--cchhcchhcccccc
Confidence 10 0 0 01011111 111111000 0000 00011122
Q ss_pred chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618 266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA 341 (353)
Q Consensus 266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~ 341 (353)
+ +..+++++++|.+|++ .++.+. .++|.+ |++.++++||.++++|+.++.. ++|++..++++..-...-+
T Consensus 309 ~--~e~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~~~~e~ 382 (423)
T cd05297 309 S--GEYASPIIEALVTGKP---RRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPRINVQE 382 (423)
T ss_pred c--hHHHHHHHHHHhcCCc---eEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHHHHHHH
Confidence 2 4678999999998765 344444 578875 8899999999999999999877 6999999888877655544
Q ss_pred HHHHHhh
Q 018618 342 GSIQKGI 348 (353)
Q Consensus 342 ~~~~~~~ 348 (353)
-.++.++
T Consensus 383 l~veA~~ 389 (423)
T cd05297 383 LAVEAAL 389 (423)
T ss_pred HHHHHHH
Confidence 4444443
No 43
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.1e-25 Score=215.39 Aligned_cols=293 Identities=21% Similarity=0.235 Sum_probs=192.2
Q ss_pred CCCeEEEEcCCCCcHHHHH--HHHHhCC-C-CcEEEEEeCCC-cHHH----HHHHhcCCCCCeEEEEeCCCchhhhhCCC
Q 018618 40 AGFKVAILGAAGGIGQPLA--MLMKINP-L-VSVLHLYDVVN-TPGV----TADISHMDTGAVVRGFLGQPQLENALTGM 110 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la--~~l~~~~-~-~~el~L~D~~~-~~~~----~~dl~~~~~~~~v~~~~~t~d~~~al~~A 110 (353)
+.+||+|||| |+++..-. -.|.+.+ + ..||+|+|+++ .... +..+.+.. ++.+++. .++|+++||+||
T Consensus 2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~-g~~~kv~-~ttd~~eAl~gA 78 (442)
T COG1486 2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEA-GAPVKVE-ATTDRREALEGA 78 (442)
T ss_pred CcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EecCHHHHhcCC
Confidence 3569999999 86655542 2344443 3 57999999988 2222 22333222 2335554 357999999999
Q ss_pred cEEEEcC---C---------CCCCCCCC--------HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHH
Q 018618 111 DLVIIPA---G---------VPRKPGMT--------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170 (353)
Q Consensus 111 DiVIi~a---g---------~~~~~g~~--------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~ 170 (353)
|||+.+. | .|.++|.. ......++++++.++++.|+++||+||++++|||+.++|+.+
T Consensus 79 dfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~~vTeAv-- 156 (442)
T COG1486 79 DFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAAIVTEAV-- 156 (442)
T ss_pred CEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHHHHHHHH--
Confidence 9999974 2 23444422 334567999999999999999999999999999999998654
Q ss_pred HHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCC-CCCcceEEe-ecCC---------Ccccccccc-----------
Q 018618 171 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-GHAG---------VTILPLLSQ----------- 228 (353)
Q Consensus 171 ~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~-~~v~~~viG-~hg~---------~~~vp~~s~----------- 228 (353)
.+. +|..|++|+|+... -....+|+.||+++ ++++..+.| ||.. ++.+|.+..
T Consensus 157 --~r~--~~~~K~VGlCh~~~-g~~~~lAe~L~~~~~~~l~~~~aGlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~ 231 (442)
T COG1486 157 --RRL--YPKIKIVGLCHGPI-GIAMELAEVLGLEPREDLRYRVAGLNHMVWILRVRDDGEDLYPELLEALEEGGSPSEP 231 (442)
T ss_pred --HHh--CCCCcEEeeCCchH-HHHHHHHHHhCCCchhceeEEEeechhhhhhhHhhhcCccchHHHHHHHhccccCCcc
Confidence 443 45459999998765 37899999999975 999999999 4433 122222111
Q ss_pred --------CC--------C---CC------C-----------------CChHHHHHHHHH----Hhc-chhhhhhhhccC
Q 018618 229 --------VK--------P---PC------S-----------------FTQEETEYLTNR----IQN-GGTEVVEAKAGA 261 (353)
Q Consensus 229 --------~~--------v---~~------~-----------------~~~~~~~el~~~----v~~-~~~~i~~~~~gk 261 (353)
.. + ++ . ...+++.+..+. .++ .-.+..+....+
T Consensus 232 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~p~~~~~~ 311 (442)
T COG1486 232 ENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEKPEELEKR 311 (442)
T ss_pred ccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcCchhhhhc
Confidence 00 0 00 0 011111111111 111 000000000112
Q ss_pred Ccc--cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618 262 GSA--TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK 335 (353)
Q Consensus 262 g~~--~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~ 335 (353)
+.+ .+ +..++++++||++|++. ++.+. .++|.+ |+|.++++||.+|++|+.++.. ++|++.-++++..
T Consensus 312 ~~~~~~~--~e~a~~ii~Ai~~~~~~---~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~~~~l~~~ 385 (442)
T COG1486 312 IGAGKYS--SEYASNIINAIENNKPS---RIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEFVKGLMHT 385 (442)
T ss_pred CCccccc--HHHHHHHHHHHhcCCce---EEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHHHHHHHHH
Confidence 222 34 46889999999999763 44444 578885 8899999999999999999777 6999999998888
Q ss_pred HHHHHHHHHHHhh
Q 018618 336 AKKELAGSIQKGI 348 (353)
Q Consensus 336 s~~~l~~~~~~~~ 348 (353)
....-+-.++.++
T Consensus 386 ~i~~e~l~veA~~ 398 (442)
T COG1486 386 NINVEELTVEAAL 398 (442)
T ss_pred HHHHHHHHHHHHH
Confidence 7766665555443
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.82 E-value=3e-19 Score=157.15 Aligned_cols=152 Identities=22% Similarity=0.247 Sum_probs=105.7
Q ss_pred eEEEEcCCCCcHHHHH--HHHHhCC-C-CcEEEEEeCCC-c----HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618 43 KVAILGAAGGIGQPLA--MLMKINP-L-VSVLHLYDVVN-T----PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV 113 (353)
Q Consensus 43 KI~IiGa~G~vG~~la--~~l~~~~-~-~~el~L~D~~~-~----~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV 113 (353)
||+|||| |++-.... ..+...+ + .+||+|+|+++ . ...+..+.... ...++.. .|+|+++|++|||+|
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~-~~~~~v~-~ttd~~eAl~gADfV 77 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEA-GADLKVE-ATTDRREALEGADFV 77 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHC-TTSSEEE-EESSHHHHHTTESEE
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc-CCCeEEE-EeCCHHHHhCCCCEE
Confidence 8999999 87755543 3444443 3 47999999998 1 12233333222 2334433 358999999999999
Q ss_pred EEcCC------------CCCCCCCC----------HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHH
Q 018618 114 IIPAG------------VPRKPGMT----------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 171 (353)
Q Consensus 114 Ii~ag------------~~~~~g~~----------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~ 171 (353)
|++.. .|.+.|.. ......++++.+.++++.|+++||+||+|++|||+..+|..+
T Consensus 78 i~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~~vt~a~--- 154 (183)
T PF02056_consen 78 INQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMGIVTEAL--- 154 (183)
T ss_dssp EE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHHHHHHHH---
T ss_pred EEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHHHHHHHH---
Confidence 99853 24455432 456678999999999999999999999999999999998654
Q ss_pred HHHhCCCCCCceEeechhhHHHHHHHHHHHhCC
Q 018618 172 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGL 204 (353)
Q Consensus 172 ~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v 204 (353)
.+. +|..|++|+|+... -+...+|+.||+
T Consensus 155 -~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~ 183 (183)
T PF02056_consen 155 -SRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM 183 (183)
T ss_dssp -HHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred -HHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence 443 45579999998775 478999999875
No 45
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.91 E-value=3.2e-08 Score=95.86 Aligned_cols=115 Identities=17% Similarity=0.240 Sum_probs=83.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHH-------------HHH-hcCCCCCeEEEEeCCCchhhhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-------------ADI-SHMDTGAVVRGFLGQPQLENAL 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~-------------~dl-~~~~~~~~v~~~~~t~d~~~al 107 (353)
|||+|+|. |+||...+.+|++.|+ +|+++|+++.+-.. .+| .+.....+++. |+|+++|+
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f---Ttd~~~a~ 74 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF---TTDYEEAV 74 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE---EcCHHHHH
Confidence 79999998 9999999999999998 99999998722111 112 11111223554 57999999
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-cEEEE-ecCCCCchhHHH
Q 018618 108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNL-ISNPVNSTVPIA 168 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv-~tNPv~~~t~~~ 168 (353)
+++|+++|+.|.|.++.- ..++..+...++.|.++.+. ++|++ .|-|+.....+-
T Consensus 75 ~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~ 131 (414)
T COG1004 75 KDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVR 131 (414)
T ss_pred hcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHH
Confidence 999999999999877521 33466788888888888765 43333 368988776553
No 46
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.81 E-value=1.2e-08 Score=90.29 Aligned_cols=118 Identities=25% Similarity=0.376 Sum_probs=77.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-H--HHHHH----H-hcCCC--------CCeEEEEeCCCchh
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-P--GVTAD----I-SHMDT--------GAVVRGFLGQPQLE 104 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~--~~~~d----l-~~~~~--------~~~v~~~~~t~d~~ 104 (353)
||+|+|| |.+|..+|..++..|+ +|+|+|.++ + . ....+ + ..... ...++. ++|++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~dl~ 74 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF---TTDLE 74 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE---ESSGG
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc---ccCHH
Confidence 7999999 9999999999999998 999999987 1 1 11111 1 11111 124554 36886
Q ss_pred hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618 105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL 183 (353)
Q Consensus 105 ~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv 183 (353)
++. +||+||.+. .+++++.+++...+++++ |+++ +.||...+-.. ++. .... .|+|+
T Consensus 75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~i--lasnTSsl~i~---~la-~~~~-~p~R~ 132 (180)
T PF02737_consen 75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDTI--LASNTSSLSIS---ELA-AALS-RPERF 132 (180)
T ss_dssp GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSE--EEE--SSS-HH---HHH-TTSS-TGGGE
T ss_pred HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCce--EEecCCCCCHH---HHH-hccC-cCceE
Confidence 655 999999985 677899999999999999 6785 48887765532 222 2222 45678
Q ss_pred Eeech
Q 018618 184 LGVTM 188 (353)
Q Consensus 184 iG~t~ 188 (353)
+|+-.
T Consensus 133 ig~Hf 137 (180)
T PF02737_consen 133 IGMHF 137 (180)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88743
No 47
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.76 E-value=5.4e-08 Score=92.52 Aligned_cols=122 Identities=22% Similarity=0.302 Sum_probs=86.0
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--H----HHHhcCC--C----CCeEEEEeCCCchhh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T----ADISHMD--T----GAVVRGFLGQPQLEN 105 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~----~dl~~~~--~----~~~v~~~~~t~d~~~ 105 (353)
.+||+|||| |.+|+.+|..++..|+ +|+|+|+++ + ++. . ..+.... . ...+..+..++|+ .
T Consensus 3 i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~ 78 (307)
T COG1250 3 IKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-A 78 (307)
T ss_pred ccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-h
Confidence 369999999 9999999999999777 999999986 1 111 1 1111110 0 1112223335675 5
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceE
Q 018618 106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL 184 (353)
Q Consensus 106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kvi 184 (353)
++++||+||..+ .+|.++.+++.+++.+++ |++++ .||.+.+...-++ ..+ -.|+|++
T Consensus 79 ~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~aIl--ASNTSsl~it~ia----~~~-~rper~i 137 (307)
T COG1250 79 ALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDAIL--ASNTSSLSITELA----EAL-KRPERFI 137 (307)
T ss_pred HhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCcEE--eeccCCCCHHHHH----HHh-CCchhEE
Confidence 899999999985 789999999999999999 68844 9999986654332 222 3467888
Q ss_pred eec
Q 018618 185 GVT 187 (353)
Q Consensus 185 G~t 187 (353)
|+.
T Consensus 138 G~H 140 (307)
T COG1250 138 GLH 140 (307)
T ss_pred EEe
Confidence 873
No 48
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.70 E-value=8.7e-08 Score=101.57 Aligned_cols=138 Identities=18% Similarity=0.211 Sum_probs=95.8
Q ss_pred cccchhhhhhhhcccCC------CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c--HHH--HHH----H-
Q 018618 22 NLQNSCLRQAKCRAKGG------AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TAD----I- 85 (353)
Q Consensus 22 ~~~~~~~~~~~~~~~~~------~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~--~~~--~~d----l- 85 (353)
+|+-.||-++.+++... .+..||+|||| |.+|..+|..++..|+ +|+|+|.++ . ++. +.+ +
T Consensus 288 ~l~~~ff~~r~~~~~~~~~~~~~~~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~ 364 (714)
T TIGR02437 288 ALIGLFLNDQYVKGKAKKADKIAKDVKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQV 364 (714)
T ss_pred HHHHHHhhhHhhcCCCCCCCCCccccceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 45556777666655432 23468999999 9999999999999998 999999987 1 211 111 1
Q ss_pred hcCCC--------CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEE
Q 018618 86 SHMDT--------GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL 156 (353)
Q Consensus 86 ~~~~~--------~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv 156 (353)
.+... ...++. ++|+ +++++||+||.++ .+++++.+++..++.+++ |+++ +
T Consensus 365 ~~g~~~~~~~~~~~~~i~~---~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~i--l 424 (714)
T TIGR02437 365 ERGRITPAKMAGVLNGITP---TLSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDAI--L 424 (714)
T ss_pred HcCCCChhhHHHHHhCeEE---eCCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcE--E
Confidence 11110 123443 4676 6799999999985 778999999999999999 5674 4
Q ss_pred ecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT 187 (353)
Q Consensus 157 ~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t 187 (353)
.||.+.+-..-++ .... .|+|++|+.
T Consensus 425 asnTS~l~i~~ia----~~~~-~p~r~ig~H 450 (714)
T TIGR02437 425 ASNTSTISISLLA----KALK-RPENFCGMH 450 (714)
T ss_pred EECCCCCCHHHHH----hhcC-CcccEEEEe
Confidence 9999886543322 2232 467888874
No 49
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.68 E-value=1.5e-07 Score=100.06 Aligned_cols=137 Identities=18% Similarity=0.247 Sum_probs=95.6
Q ss_pred cccchhhhhhhhcccC-C---CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHH--HHH-H----hc
Q 018618 22 NLQNSCLRQAKCRAKG-G---AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TAD-I----SH 87 (353)
Q Consensus 22 ~~~~~~~~~~~~~~~~-~---~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~--~~d-l----~~ 87 (353)
+|+-.||-++.+++.. . .+..||+|||| |.+|+.+|..++..|+ +|+|+|+++ .++. ..+ + ..
T Consensus 312 al~~~f~~~~~~~~~~~~~~~~~i~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~ 388 (737)
T TIGR02441 312 ALIGLFHGQTDCKKNKFGKPQRPVKTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKR 388 (737)
T ss_pred HHHHHHHHHHHccCCCCCCCCCcccEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHc
Confidence 5566677776666553 1 23368999999 9999999999999998 999999987 1211 111 1 11
Q ss_pred CCC--------CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618 88 MDT--------GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 158 (353)
Q Consensus 88 ~~~--------~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 158 (353)
... ...++. ++|+ +++++||+||.++ .+|.++.+++..++.+++ |+++ +.|
T Consensus 389 g~~~~~~~~~~~~~i~~---~~~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~i--las 448 (737)
T TIGR02441 389 KKITSLERDSILSNLTP---TLDY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHCI--IAS 448 (737)
T ss_pred CCCCHHHHHHHHhCeEE---eCCH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCcE--EEE
Confidence 100 123443 4676 6899999999985 788999999999999999 5674 489
Q ss_pred CCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 159 NPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 159 NPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
|.+.+-..-++ .... .|+|++|+
T Consensus 449 NTSsl~i~~la----~~~~-~p~r~ig~ 471 (737)
T TIGR02441 449 NTSALPIKDIA----AVSS-RPEKVIGM 471 (737)
T ss_pred cCCCCCHHHHH----hhcC-CccceEEE
Confidence 99886643332 2233 35788886
No 50
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.63 E-value=3.6e-07 Score=87.99 Aligned_cols=119 Identities=16% Similarity=0.178 Sum_probs=83.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHH-----H--H-HHhcCC-----CCCeEEEEeCCCchhhhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGV-----T--A-DISHMD-----TGAVVRGFLGQPQLENAL 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~-----~--~-dl~~~~-----~~~~v~~~~~t~d~~~al 107 (353)
.||+|||+ |.+|+.+|..++..|+ +|+++|+++ .... . + .+.... ....++. ++++++++
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~---~~~l~~av 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF---VATIEACV 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee---cCCHHHHh
Confidence 58999999 9999999999999998 999999986 1111 0 0 111110 0123343 35788899
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
++||+|+.++ .+|.++.+++...+.+++| ++ |+.||.+.+... ++. .... .|+|++|+
T Consensus 82 ~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s---~la-~~~~-~p~R~~g~ 140 (321)
T PRK07066 82 ADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPT---DFY-ARAT-HPERCVVG 140 (321)
T ss_pred cCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHH---HHH-HhcC-CcccEEEE
Confidence 9999999985 6778889999999999995 55 568888876542 222 2222 35678776
Q ss_pred c
Q 018618 187 T 187 (353)
Q Consensus 187 t 187 (353)
.
T Consensus 141 H 141 (321)
T PRK07066 141 H 141 (321)
T ss_pred e
Confidence 3
No 51
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.58 E-value=4.2e-07 Score=96.27 Aligned_cols=120 Identities=18% Similarity=0.280 Sum_probs=83.8
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCC--c-HHH--HH-HHh----cCCC--------CCeEEEEeCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN--T-PGV--TA-DIS----HMDT--------GAVVRGFLGQ 100 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~--~-~~~--~~-dl~----~~~~--------~~~v~~~~~t 100 (353)
+..||+|||| |.+|+.+|..++ ..|+ +|+|+|.++ + .+. .. .+. .... ...++. +
T Consensus 303 ~i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~ 376 (699)
T TIGR02440 303 KIKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITG---T 376 (699)
T ss_pred cccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEE---e
Confidence 3468999999 999999999988 4788 999999987 1 111 11 111 1110 123443 4
Q ss_pred CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 101 ~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
+|+ +++++||+||.++ .+++++.+++..++.+++ |++ |+.||.+.+-..-++ ... -.
T Consensus 377 ~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~la----~~~-~~ 434 (699)
T TIGR02440 377 TDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSSLPIGQIA----AAA-SR 434 (699)
T ss_pred CCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCCCCHHHHH----Hhc-CC
Confidence 676 6899999999985 678899999999999999 466 448999886543332 222 24
Q ss_pred CCceEeec
Q 018618 180 PKKLLGVT 187 (353)
Q Consensus 180 ~~kviG~t 187 (353)
|+|++|+.
T Consensus 435 p~r~~g~H 442 (699)
T TIGR02440 435 PENVIGLH 442 (699)
T ss_pred cccEEEEe
Confidence 56888863
No 52
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.57 E-value=7.6e-07 Score=94.59 Aligned_cols=118 Identities=19% Similarity=0.237 Sum_probs=84.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--HH----HH-hcCCC--------CCeEEEEeCCCch
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TA----DI-SHMDT--------GAVVRGFLGQPQL 103 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~~----dl-~~~~~--------~~~v~~~~~t~d~ 103 (353)
.||+|||| |.+|..+|..++..|+ +|+|+|+++ + .+. .. .+ .+... ...++. ++|+
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 387 (715)
T PRK11730 314 KQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP---TLDY 387 (715)
T ss_pred ceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eCCH
Confidence 58999999 9999999999999998 999999987 1 111 11 11 11110 123443 4676
Q ss_pred hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618 104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 182 (353)
Q Consensus 104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k 182 (353)
+++++||+||.+. .+++++.+++..++++++| ++ |+.||.+.+-..-++ .... .|+|
T Consensus 388 -~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la----~~~~-~p~r 445 (715)
T PRK11730 388 -AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLLA----KALK-RPEN 445 (715)
T ss_pred -HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHH----hhcC-CCcc
Confidence 6789999999985 7789999999999999994 66 449999886543222 2233 3578
Q ss_pred eEeec
Q 018618 183 LLGVT 187 (353)
Q Consensus 183 viG~t 187 (353)
++|+.
T Consensus 446 ~~g~H 450 (715)
T PRK11730 446 FCGMH 450 (715)
T ss_pred EEEEe
Confidence 88873
No 53
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.54 E-value=7.8e-07 Score=84.48 Aligned_cols=119 Identities=19% Similarity=0.278 Sum_probs=81.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHH-H--H---HH-HhcCC-C--------CCeEEEEeCCCch
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG-V--T---AD-ISHMD-T--------GAVVRGFLGQPQL 103 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~-~--~---~d-l~~~~-~--------~~~v~~~~~t~d~ 103 (353)
.||+|||+ |.+|..+|..++..|+ +|+++|+++ +.. . . ++ +.+.. . ..+++. ++|+
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~---~~~~ 79 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRF---TTDL 79 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEe---eCCH
Confidence 48999999 9999999999999998 999999987 111 1 0 11 11110 0 122333 4677
Q ss_pred hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618 104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 181 (353)
Q Consensus 104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~ 181 (353)
+++++||+||.+. .++.++.+++...+.+++ |+++ ++||........++ .... .++
T Consensus 80 -~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~i--l~snTS~~~~~~la----~~~~-~~~ 137 (286)
T PRK07819 80 -GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDAV--LASNTSSIPIMKLA----AATK-RPG 137 (286)
T ss_pred -HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHH----hhcC-CCc
Confidence 6789999999985 677888999999999997 4664 47787765543322 2333 356
Q ss_pred ceEeech
Q 018618 182 KLLGVTM 188 (353)
Q Consensus 182 kviG~t~ 188 (353)
|++|+..
T Consensus 138 r~~g~hf 144 (286)
T PRK07819 138 RVLGLHF 144 (286)
T ss_pred cEEEEec
Confidence 7887743
No 54
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.50 E-value=8.3e-07 Score=94.22 Aligned_cols=119 Identities=19% Similarity=0.305 Sum_probs=84.6
Q ss_pred CCeEEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCC-c--HH--HHHH----H-hcCCC--------CCeEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN-T--PG--VTAD----I-SHMDT--------GAVVRGFLGQP 101 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~-~--~~--~~~d----l-~~~~~--------~~~v~~~~~t~ 101 (353)
..||+|||| |.+|..+|..++ ..|+ +|+|+|.++ . .+ ...+ + ..... ..+++. ++
T Consensus 309 i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~ 382 (708)
T PRK11154 309 VNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISG---TT 382 (708)
T ss_pred ccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEE---eC
Confidence 468999999 999999999998 7798 999999976 1 11 1111 1 11110 123444 46
Q ss_pred chhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618 102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180 (353)
Q Consensus 102 d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~ 180 (353)
|+ +++++||+||.+. .+|.++.+++...+++++ |++++ .||.+.+...-++ .... .|
T Consensus 383 ~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~il--asnTS~l~i~~la----~~~~-~p 440 (708)
T PRK11154 383 DY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHTIF--ASNTSSLPIGQIA----AAAA-RP 440 (708)
T ss_pred Ch-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----HhcC-cc
Confidence 76 6899999999985 788999999999999999 67744 8999886653332 2222 35
Q ss_pred CceEeec
Q 018618 181 KKLLGVT 187 (353)
Q Consensus 181 ~kviG~t 187 (353)
+|++|+.
T Consensus 441 ~r~ig~H 447 (708)
T PRK11154 441 EQVIGLH 447 (708)
T ss_pred cceEEEe
Confidence 6888873
No 55
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.49 E-value=3e-07 Score=81.78 Aligned_cols=123 Identities=20% Similarity=0.297 Sum_probs=73.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC----------------CCCeEEEEeCCCchhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLEN 105 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~----------------~~~~v~~~~~t~d~~~ 105 (353)
|||+|+|. |+||..+|..|+..|+ +++.+|+++. .+..++... ...+++. ++|+++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~--~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~---t~~~~~ 72 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEE--KVEALNNGELPIYEPGLDELLKENVSAGRLRA---TTDIEE 72 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HH--HHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE---ESEHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChH--HHHHHhhccccccccchhhhhccccccccchh---hhhhhh
Confidence 79999998 9999999999999998 9999999862 111222211 0234554 368888
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHHHHHHHHHhCCC
Q 018618 106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKAGTY 178 (353)
Q Consensus 106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~~~~~~~~~~~~ 178 (353)
++++||+++++.+.|...+.+ -+...+...++.|.++. ++.+|++= |-|....-.++..++.+.++.
T Consensus 73 ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~ 141 (185)
T PF03721_consen 73 AIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGK 141 (185)
T ss_dssp HHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCT
T ss_pred hhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhccc
Confidence 899999999999887655321 12333455556666554 45554443 578877764555556665543
No 56
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.48 E-value=1.1e-07 Score=89.70 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=73.6
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEE----EEeCC----CchhhhhC--CCc
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVR----GFLGQ----PQLENALT--GMD 111 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~----~~~~t----~d~~~al~--~AD 111 (353)
|.|+||+|++|+.++..|+..+. .+|+++|.++ +.....++........++ ...++ ..+..+++ +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 68999999999999999998865 4899999988 444445553111111121 11111 23356677 999
Q ss_pred EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 112 LVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 112 iVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
+|+++|....-+- ....+.+..|+-..+++++...+++-+-.|.+.|
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~IST 128 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFIST 128 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 9999987654332 3467788999999999999999998777777776
No 57
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.47 E-value=1.5e-06 Score=82.40 Aligned_cols=119 Identities=20% Similarity=0.331 Sum_probs=77.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHH----Hh-----cCCC---------CCeEEEEeCCCc
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTAD----IS-----HMDT---------GAVVRGFLGQPQ 102 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~d----l~-----~~~~---------~~~v~~~~~t~d 102 (353)
+||+|||+ |.+|..+|..++..|+ +|+++|+++ ....+.+ +. .... ...++. ++|
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~d 77 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---TTD 77 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---eCC
Confidence 59999999 9999999999999888 999999986 1111111 10 0010 012333 467
Q ss_pred hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK 181 (353)
Q Consensus 103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~ 181 (353)
+++++++||+||++. ..+.+..+++.+.+.++++ +++ +++|.+..... ++. .... .+.
T Consensus 78 ~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~i--i~sntSt~~~~---~~~-~~~~-~~~ 136 (287)
T PRK08293 78 LAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKTI--FATNSSTLLPS---QFA-EATG-RPE 136 (287)
T ss_pred HHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCCE--EEECcccCCHH---HHH-hhcC-Ccc
Confidence 878899999999985 3446677888888888875 553 35676654332 222 2222 345
Q ss_pred ceEeec
Q 018618 182 KLLGVT 187 (353)
Q Consensus 182 kviG~t 187 (353)
|++|+.
T Consensus 137 r~vg~H 142 (287)
T PRK08293 137 KFLALH 142 (287)
T ss_pred cEEEEc
Confidence 777763
No 58
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.44 E-value=5.1e-06 Score=75.72 Aligned_cols=102 Identities=19% Similarity=0.121 Sum_probs=63.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||+|||++|.+|++++..|.+.|. +|.++|+++ ......+..+... ........ ++.+++++++|+||++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~--~~~~ea~~~aDvVilav 76 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG--ADNAEAAKRADVVILAV 76 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE--eChHHHHhcCCEEEEEC
Confidence 6999998449999999999999886 999999876 2222222222110 11111111 23367899999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 163 (353)
Q Consensus 118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~ 163 (353)
.. ..+.++++.+....++.+||-++||...
T Consensus 77 p~----------------~~~~~~l~~l~~~l~~~vvI~~~ngi~~ 106 (219)
T TIGR01915 77 PW----------------DHVLKTLESLRDELSGKLVISPVVPLAS 106 (219)
T ss_pred CH----------------HHHHHHHHHHHHhccCCEEEEeccCcee
Confidence 21 1123334444433344677888899875
No 59
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.43 E-value=3.2e-06 Score=85.39 Aligned_cols=166 Identities=19% Similarity=0.225 Sum_probs=110.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCC--CcE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENALTG--MDL 112 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~--ADi 112 (353)
.+.|.|+||+|++|+.++..++..+. .+|+++|.++ ......++.+.-...++..+.+ ..-.+.++++ .|+
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 45899999999999999999888854 5999999998 3444455554211233333322 2345678888 999
Q ss_pred EEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec----CCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 113 VIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 113 VIi~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t----NPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
|+++|...+-|-+ ...+-...|+-..+++++...++.=+..|.+.| ||.|+| |.
T Consensus 329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvm--------------------Ga 388 (588)
T COG1086 329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVM--------------------GA 388 (588)
T ss_pred EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHh--------------------hH
Confidence 9999987776654 456778999999999999999988777777776 555544 44
Q ss_pred chhhHHHHHHHHHHHhCCCCCC---C-cceEEeecCCCccccccccC
Q 018618 187 TMLDVVRANTFVAEVLGLDPRD---V-DVPVVGGHAGVTILPLLSQV 229 (353)
Q Consensus 187 t~ld~~R~~~~lA~~l~v~~~~---v-~~~viG~hg~~~~vp~~s~~ 229 (353)
|..-...+-..+++..+-.... | .+-|+|..| +++|+|.+.
T Consensus 389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG--SViPlFk~Q 433 (588)
T COG1086 389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG--SVIPLFKKQ 433 (588)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC--CCHHHHHHH
Confidence 4322222222222211110111 2 366899988 599998753
No 60
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.41 E-value=2.8e-07 Score=82.80 Aligned_cols=121 Identities=21% Similarity=0.329 Sum_probs=86.4
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c-----HHHHHHHhcCC----C-------------CCeEEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T-----PGVTADISHMD----T-------------GAVVRG 96 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~-----~~~~~dl~~~~----~-------------~~~v~~ 96 (353)
+...|+|+|| |.+|+.+|+..++.|+ .|+|+|.++ . ++....+.+.. . ..+++
T Consensus 10 ~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~- 85 (298)
T KOG2304|consen 10 EIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIK- 85 (298)
T ss_pred cccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHH-
Confidence 4458999999 9999999999999999 999999987 1 22222222211 0 01222
Q ss_pred EeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHh
Q 018618 97 FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKA 175 (353)
Q Consensus 97 ~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~ 175 (353)
.++|.+.++.+||+||.+ ..+|+++.+++.+.+++.|+ ++ |..||.+.+.-. .+. ..
T Consensus 86 --~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~--il~tNTSSl~lt---~ia-~~ 143 (298)
T KOG2304|consen 86 --TSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST--ILATNTSSLSLT---DIA-SA 143 (298)
T ss_pred --HcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce--EEeecccceeHH---HHH-hh
Confidence 257888999999999887 48999999999999999996 55 348898775432 111 22
Q ss_pred CCCCCCceEeec
Q 018618 176 GTYDPKKLLGVT 187 (353)
Q Consensus 176 ~~~~~~kviG~t 187 (353)
. -+|.|+.|+.
T Consensus 144 ~-~~~srf~GlH 154 (298)
T KOG2304|consen 144 T-QRPSRFAGLH 154 (298)
T ss_pred c-cChhhhceee
Confidence 2 3466888884
No 61
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.39 E-value=2.2e-06 Score=81.17 Aligned_cols=116 Identities=17% Similarity=0.280 Sum_probs=79.1
Q ss_pred EEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCCCCC
Q 018618 45 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVPRKP 123 (353)
Q Consensus 45 ~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~~~~ 123 (353)
.|+||+|++|++++..|++.|...+|..+|+........++........+.. +....++++|++++|+||++|+...-.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 3899999999999999999986569999998762211112222221001111 122357889999999999998754333
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 124 G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 124 g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
+ .....+...|+...+++.+..++..-.. +|+|....
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~Vkr--lVytSS~~ 118 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKR--LVYTSSIS 118 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCE--EEEEcCcc
Confidence 4 4567788999999999999999875443 44444433
No 62
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.35 E-value=1.3e-06 Score=75.45 Aligned_cols=94 Identities=23% Similarity=0.314 Sum_probs=64.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--CC------CeEEEEeCCCchhhhhCCCcEEE
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--TG------AVVRGFLGQPQLENALTGMDLVI 114 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~~------~~v~~~~~t~d~~~al~~ADiVI 114 (353)
||+|+|| |..|.++|..|..+|. +|.|+++++.....+.-.+.. +. ..+.. ++|+++++++||+||
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~---t~dl~~a~~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA---TTDLEEALEDADIII 74 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE---ESSHHHHHTT-SEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc---ccCHHHHhCcccEEE
Confidence 8999999 9999999999999997 999999976222222222321 11 22433 478999999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEec
Q 018618 115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLIS 158 (353)
Q Consensus 115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~t 158 (353)
++. | ....+++++++..+-+ +..+++++
T Consensus 75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~ 103 (157)
T PF01210_consen 75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISAT 103 (157)
T ss_dssp E-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEec
Confidence 974 2 2236788888888874 45555443
No 63
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.35 E-value=1.2e-05 Score=78.07 Aligned_cols=170 Identities=14% Similarity=0.044 Sum_probs=102.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHh-cC--CCCCeEEEEeC----CCchhhhhCCCc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADIS-HM--DTGAVVRGFLG----QPQLENALTGMD 111 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~-~~--~~~~~v~~~~~----t~d~~~al~~AD 111 (353)
++||.|+||+|++|++++..|+..|. +|+.+|... ......++. .. .....+..+.+ ..++++.++++|
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 46999999999999999999999887 999999754 111111111 00 00112333221 123455679999
Q ss_pred EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCch---hHHHHHHHHHhCCCCCCceEe
Q 018618 112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST---VPIAAEVFKKAGTYDPKKLLG 185 (353)
Q Consensus 112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~---t~~~~~~~~~~~~~~~~kviG 185 (353)
+||++|+....+ ..+..+....|+....++.+.+++.... .++.+|.. +... .+. ....-..|...+|
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~v~~SS~~vyg~~~~~~~-----~e~~~~~p~~~Y~ 166 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-SFTYAASSSTYGDHPDLPK-----IEERIGRPLSPYA 166 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeechHhhCCCCCCCC-----CCCCCCCCCChhh
Confidence 999998754321 2344567789999999999999887543 34434321 1000 000 0111123445678
Q ss_pred echhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618 186 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 218 (353)
Q Consensus 186 ~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg 218 (353)
.+.+...++...+++..+++...++ +.++|.+.
T Consensus 167 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 167 VTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 8766666666666777788776664 66888643
No 64
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.32 E-value=6.4e-06 Score=82.78 Aligned_cols=169 Identities=11% Similarity=-0.020 Sum_probs=99.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
+|||.|+||+|+||++++..|+..|+ +|+.+|... .......+. ....+..+.. +-+..++.++|+||++|+
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~-Di~~~~~~~~D~ViHlAa 193 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFTGRKENLVHLF---GNPRFELIRH-DVVEPILLEVDQIYHLAC 193 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCccHhHhhhhc---cCCceEEEEC-ccccccccCCCEEEECce
Confidence 58999999999999999999999988 999999753 111111111 1123333221 222345789999999987
Q ss_pred CCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchh--HHHHHHHHH-hCCCCCCceEeechhhHH
Q 018618 119 VPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTV--PIAAEVFKK-AGTYDPKKLLGVTMLDVV 192 (353)
Q Consensus 119 ~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t--~~~~~~~~~-~~~~~~~kviG~t~ld~~ 192 (353)
... ....+..+++..|+....++++.+++.+. .+|++|.- +.... ....+-.+. ..-+.+...+|.+.+...
T Consensus 194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~--r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE 271 (436)
T PLN02166 194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAE 271 (436)
T ss_pred eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHH
Confidence 532 22234567788999999999999998753 55555431 11000 000000000 001223345777666666
Q ss_pred HHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 193 RANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 193 R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
++-..+++..+++..-++ ..++|.+
T Consensus 272 ~~~~~y~~~~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 272 TLAMDYHRGAGVEVRIARIFNTYGPR 297 (436)
T ss_pred HHHHHHHHHhCCCeEEEEEccccCCC
Confidence 665666666676554443 3467754
No 65
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.32 E-value=3.8e-06 Score=79.80 Aligned_cols=118 Identities=14% Similarity=0.194 Sum_probs=75.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHH-H-------Hh---c-CCC--------CCeEEEEeCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTA-D-------IS---H-MDT--------GAVVRGFLGQ 100 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~-d-------l~---~-~~~--------~~~v~~~~~t 100 (353)
.||+|||+ |.+|..++..++..|+ +|+++|+++ ....+. . +. + ... ...+.. +
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~ 77 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRT---S 77 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEe---e
Confidence 48999999 9999999999999998 999999987 111111 1 11 1 000 011222 3
Q ss_pred CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 101 ~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
+++ +++++||+||.+. ..+.++.+++.+.+.++++ ++++ +||.......-+ . ... -.
T Consensus 78 ~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~~~~l---a-~~~-~~ 135 (291)
T PRK06035 78 TSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIMIAEI---A-TAL-ER 135 (291)
T ss_pred CCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCCHHHH---H-hhc-CC
Confidence 566 6789999999985 3345667788888888875 5644 566655443222 1 222 23
Q ss_pred CCceEeec
Q 018618 180 PKKLLGVT 187 (353)
Q Consensus 180 ~~kviG~t 187 (353)
+.|++|+.
T Consensus 136 ~~r~ig~h 143 (291)
T PRK06035 136 KDRFIGMH 143 (291)
T ss_pred cccEEEEe
Confidence 56788874
No 66
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.32 E-value=8.8e-06 Score=76.93 Aligned_cols=118 Identities=21% Similarity=0.365 Sum_probs=78.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH-----H-HHHhcCC-C--------CCeEEEEeCCCch
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV-----T-ADISHMD-T--------GAVVRGFLGQPQL 103 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~-----~-~dl~~~~-~--------~~~v~~~~~t~d~ 103 (353)
.||+|||+ |.+|..++..++..|+ +|+++|+++ . .+. . .++.... . ...++. ++|+
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~---~~~~ 77 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG---TTDL 77 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence 48999999 9999999999999988 999999987 1 111 0 1111111 0 013333 3565
Q ss_pred hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618 104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 182 (353)
Q Consensus 104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k 182 (353)
+++++||+||+++ .++....+++.+.+.++++ ++++ +||-..+-...++ ...+. +.|
T Consensus 78 -~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~la----~~~~~-~~r 135 (282)
T PRK05808 78 -DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITELA----AATKR-PDK 135 (282)
T ss_pred -HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----HhhCC-Ccc
Confidence 5689999999985 4556777888888998885 5644 6777665543322 22233 457
Q ss_pred eEeec
Q 018618 183 LLGVT 187 (353)
Q Consensus 183 viG~t 187 (353)
++|+.
T Consensus 136 ~ig~h 140 (282)
T PRK05808 136 VIGMH 140 (282)
T ss_pred eEEee
Confidence 88874
No 67
>PLN02427 UDP-apiose/xylose synthase
Probab=98.25 E-value=1.2e-05 Score=79.10 Aligned_cols=114 Identities=17% Similarity=0.094 Sum_probs=73.1
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcC---CCCCeEEEEe----CCCchhhhhCCCc
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHM---DTGAVVRGFL----GQPQLENALTGMD 111 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~---~~~~~v~~~~----~t~d~~~al~~AD 111 (353)
++|||.|+||+|++|++++..|... +. +|+.+|.+.... ..+... .....++.+. ...+++++++++|
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 4689999999999999999999987 46 899999754211 111111 0011233321 1234567788999
Q ss_pred EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618 112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 159 (353)
+||++|+..... .....+.+..|+....++++..++.. ..+|.+|.
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS 136 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 136 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEee
Confidence 999999754211 12234556778888888888887665 34555543
No 68
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.24 E-value=1.3e-05 Score=81.18 Aligned_cols=119 Identities=15% Similarity=0.183 Sum_probs=76.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC---------------CCCeEEEEeCCCchhh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---------------TGAVVRGFLGQPQLEN 105 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~---------------~~~~v~~~~~t~d~~~ 105 (353)
+|||+|+|+ |+||..+|..|+..|...+|+.+|+++.+ +..+.... ....+.. ++|+++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~--v~~l~~g~~~~~e~gl~ell~~~~~~~l~~---t~~~~~ 74 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPR--IDAWNSDQLPIYEPGLDEVVKQCRGKNLFF---STDVEK 74 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHH--HHHHHcCCCccCCCCHHHHHHHhhcCCEEE---EcCHHH
Confidence 489999999 99999999999998644489999998621 11222110 0112333 467778
Q ss_pred hhCCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-e-cCCCCchhHH
Q 018618 106 ALTGMDLVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNL-I-SNPVNSTVPI 167 (353)
Q Consensus 106 al~~ADiVIi~ag~~~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~-tNPv~~~t~~ 167 (353)
++++||++|++.+.|...+- .. + -.-++..+.+.++.|.++.++..+++ - |.|....-.+
T Consensus 75 ~i~~advi~I~V~TP~~~~g~~~-~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~~~ 137 (473)
T PLN02353 75 HVAEADIVFVSVNTPTKTRGLGA-G-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (473)
T ss_pred HHhcCCEEEEEeCCCCCCCCCcC-C-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHHHH
Confidence 89999999999998864311 00 0 02234456777777777765443333 2 5888766444
No 69
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.21 E-value=2.3e-05 Score=82.86 Aligned_cols=180 Identities=15% Similarity=0.082 Sum_probs=107.9
Q ss_pred hhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cc-
Q 018618 26 SCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ- 102 (353)
Q Consensus 26 ~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d- 102 (353)
.|-++-.|... +.|||.|+||+|++|++++..|... ++ +|+.+|+.... . .++.. ...++.+.+. .|
T Consensus 303 ~~~~~~~~~~~---~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~-~-~~~~~---~~~~~~~~gDl~d~ 372 (660)
T PRK08125 303 RLNSKPACSAK---RRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDA-I-SRFLG---HPRFHFVEGDISIH 372 (660)
T ss_pred Eecccchhhhh---cCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchh-h-hhhcC---CCceEEEeccccCc
Confidence 35666666554 7789999999999999999999874 67 99999976521 1 11111 1122222111 11
Q ss_pred ---hhhhhCCCcEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC-CCCchh--HHHHHHHHH
Q 018618 103 ---LENALTGMDLVIIPAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV--PIAAEVFKK 174 (353)
Q Consensus 103 ---~~~al~~ADiVIi~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN-Pv~~~t--~~~~~~~~~ 174 (353)
++++++++|+||++|+... .......+++..|+....++.+.++++. . .+|..|. -+.... ....+-...
T Consensus 373 ~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~-~~V~~SS~~vyg~~~~~~~~E~~~~ 450 (660)
T PRK08125 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K-RIIFPSTSEVYGMCTDKYFDEDTSN 450 (660)
T ss_pred HHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C-eEEEEcchhhcCCCCCCCcCccccc
Confidence 3457899999999987543 2223455677889999999999999876 3 4444433 221100 000000000
Q ss_pred ---hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 175 ---AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 175 ---~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
.+..++...+|.+.+...++-..+++..|++..-++ ..++|.+
T Consensus 451 ~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 451 LIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred cccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 000012236888766666776777788788766665 4577864
No 70
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.21 E-value=5.7e-06 Score=84.47 Aligned_cols=121 Identities=21% Similarity=0.302 Sum_probs=80.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--H---H-HHhcCC-C--------CCeEEEEeCCCc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T---A-DISHMD-T--------GAVVRGFLGQPQ 102 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~---~-dl~~~~-~--------~~~v~~~~~t~d 102 (353)
..||+|||+ |.+|+.+|..++..|+ +|+++|+++ + .+. . + .+.... . ..+++. ++|
T Consensus 5 ~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~ 78 (503)
T TIGR02279 5 VVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIP---VTD 78 (503)
T ss_pred ccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEE---eCC
Confidence 458999999 9999999999999998 999999987 1 111 0 0 111110 0 122443 357
Q ss_pred hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 182 (353)
Q Consensus 103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k 182 (353)
+ +++.+||+||.+. .++.++.+.+...+.+++|... |++||.+.+-..-++. . .. .+.|
T Consensus 79 ~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~-IlasnTStl~i~~iA~---~-~~-~p~r 137 (503)
T TIGR02279 79 L-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADT-IIASNTSSLSITAIAA---G-LA-RPER 137 (503)
T ss_pred H-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe-EEEECCCCCCHHHHHH---h-cC-cccc
Confidence 6 5689999999984 5667788888888999986433 3578887765432221 2 22 2456
Q ss_pred eEeech
Q 018618 183 LLGVTM 188 (353)
Q Consensus 183 viG~t~ 188 (353)
++|+..
T Consensus 138 ~~G~HF 143 (503)
T TIGR02279 138 VAGLHF 143 (503)
T ss_pred eEEEec
Confidence 777643
No 71
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.18 E-value=1.3e-05 Score=82.11 Aligned_cols=120 Identities=21% Similarity=0.301 Sum_probs=78.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--HHH----Hh-cCC--------CCCeEEEEeCCCch
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TAD----IS-HMD--------TGAVVRGFLGQPQL 103 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~~d----l~-~~~--------~~~~v~~~~~t~d~ 103 (353)
.||+|||+ |.+|..+|..++..|+ +|+++|+++ + .+. ..+ +. +.. ...+++. ++++
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~~ 81 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP---VEAL 81 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence 58999999 9999999999999998 999999987 1 111 111 11 110 0122443 3566
Q ss_pred hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618 104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 182 (353)
Q Consensus 104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k 182 (353)
+++++||+||.+. .++.++.+.+...+.+.+ |++++ +||.+.+-..-++ .... .|+|
T Consensus 82 -~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~ail--asntStl~i~~la----~~~~-~p~r 139 (507)
T PRK08268 82 -ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDCIL--ATNTSSLSITAIA----AALK-HPER 139 (507)
T ss_pred -HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----hhcC-Cccc
Confidence 5688999999984 566777888888899988 56644 6666654432221 2222 3567
Q ss_pred eEeechh
Q 018618 183 LLGVTML 189 (353)
Q Consensus 183 viG~t~l 189 (353)
++|+..+
T Consensus 140 ~~G~hff 146 (507)
T PRK08268 140 VAGLHFF 146 (507)
T ss_pred EEEEeec
Confidence 7776433
No 72
>PLN02650 dihydroflavonol-4-reductase
Probab=98.18 E-value=3.8e-05 Score=74.52 Aligned_cols=179 Identities=15% Similarity=0.051 Sum_probs=101.3
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcC-CCCCeEEEEe----CCCchhhhhCCCc
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTGAVVRGFL----GQPQLENALTGMD 111 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~-~~~~~v~~~~----~t~d~~~al~~AD 111 (353)
++..++|.|+||+|++|++++..|+..|. +|++++.+.. .....++... .....+..+. ....++++++++|
T Consensus 2 ~~~~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d 79 (351)
T PLN02650 2 GSQKETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT 79 (351)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence 34456999999999999999999999988 8888877541 1111122111 1011222211 1234567788999
Q ss_pred EEEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCch----hHHHHHHHH---Hh--CCCCC
Q 018618 112 LVIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST----VPIAAEVFK---KA--GTYDP 180 (353)
Q Consensus 112 iVIi~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~----t~~~~~~~~---~~--~~~~~ 180 (353)
+||++|+.......+ ..+.+..|+....++++.+.+...-..+|++|.. +..- .+...+-.+ .. ...++
T Consensus 80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 159 (351)
T PLN02650 80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMT 159 (351)
T ss_pred EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccc
Confidence 999998753211112 2356788999999999999876532345554432 1000 000000000 00 00001
Q ss_pred CceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618 181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 218 (353)
Q Consensus 181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg 218 (353)
...+|.+.+....+-..+++..|++..-++ +.++|...
T Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 160 GWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI 198 (351)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence 124666666666666667777787665553 55788643
No 73
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.17 E-value=5.4e-05 Score=73.49 Aligned_cols=175 Identities=14% Similarity=0.074 Sum_probs=97.0
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE-EeCCCchhhhhCC--CcEEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENALTG--MDLVI 114 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~--ADiVI 114 (353)
+.++|.|+||+|++|++++..|++.|. +|+.+|++.. ......+........+.. .....++.+.+++ .|+||
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 80 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVF 80 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence 457999999999999999999999887 8999997662 111111211100001111 1111234455554 59999
Q ss_pred EcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhH
Q 018618 115 IPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 191 (353)
Q Consensus 115 i~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~ 191 (353)
.+++.+.. ...+....+..|+.....+++.+.+.+....++++|.. +........ ........++...+|.+....
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~-~~~e~~~~~p~~~Y~~sK~~~ 159 (349)
T TIGR02622 81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVW-GYRETDPLGGHDPYSSSKACA 159 (349)
T ss_pred ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCC-CCccCCCCCCCCcchhHHHHH
Confidence 99885422 11234556788999999999998876533355555542 111000000 000111233445677776666
Q ss_pred HHHHHHHHHHh-------CCCCCCCc-ceEEeec
Q 018618 192 VRANTFVAEVL-------GLDPRDVD-VPVVGGH 217 (353)
Q Consensus 192 ~R~~~~lA~~l-------~v~~~~v~-~~viG~h 217 (353)
.++-..+++.+ +++...++ +.++|..
T Consensus 160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred HHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 66655666654 44443342 4566643
No 74
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.16 E-value=3.2e-05 Score=73.45 Aligned_cols=121 Identities=21% Similarity=0.331 Sum_probs=73.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHH----HH----hcCCCC--------CeEEEEeCCCc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTA----DI----SHMDTG--------AVVRGFLGQPQ 102 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~----dl----~~~~~~--------~~v~~~~~t~d 102 (353)
.+||+|||+ |.+|..+|..++..|+ +|+++|+++ ...... .+ ...... ..++. +++
T Consensus 4 ~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 77 (292)
T PRK07530 4 IKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST---ATD 77 (292)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe---eCC
Confidence 358999999 9999999999999998 999999986 111111 11 111100 12333 356
Q ss_pred hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 181 (353)
Q Consensus 103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~ 181 (353)
+ +++++||+||++. .++....+.+.+.+..++ |++++ +||.+.+-.. ++... . -.+.
T Consensus 78 ~-~~~~~aD~Vieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~s---~la~~-~-~~~~ 135 (292)
T PRK07530 78 L-EDLADCDLVIEAA--------------TEDETVKRKIFAQLCPVLKPEAIL--ATNTSSISIT---RLASA-T-DRPE 135 (292)
T ss_pred H-HHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHH---HHHhh-c-CCcc
Confidence 6 5689999999984 223344556667777777 46644 4666554432 22222 2 2345
Q ss_pred ceEeechh
Q 018618 182 KLLGVTML 189 (353)
Q Consensus 182 kviG~t~l 189 (353)
|++|+..+
T Consensus 136 r~~g~h~~ 143 (292)
T PRK07530 136 RFIGIHFM 143 (292)
T ss_pred cEEEeecc
Confidence 77776433
No 75
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.15 E-value=5.6e-05 Score=72.93 Aligned_cols=174 Identities=17% Similarity=0.082 Sum_probs=99.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII 115 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi 115 (353)
++||.|+||+|++|++++..|++.|. +|++++++. ......++........+..+.+ ..++.++++++|+||+
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 46899999999999999999999987 887776654 2222111211110112332211 1235567889999999
Q ss_pred cCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCch------hHHHHHH------HHHhCCCCCC
Q 018618 116 PAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST------VPIAAEV------FKKAGTYDPK 181 (353)
Q Consensus 116 ~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~------t~~~~~~------~~~~~~~~~~ 181 (353)
+|+.......+ ..+++..|+.....+++.+.+...-..++++|.- +... .....+- ... .-.++.
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~-~~~~p~ 165 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLT-SEKPPT 165 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhh-hcCCcc
Confidence 98743221122 2345688999999999999876422244444321 1100 0000000 000 012344
Q ss_pred ceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 182 KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
..+|.+.+...++-..+++..|++..-++ ..|+|.+
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 55777666666666667777777655553 5577865
No 76
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.14 E-value=2.3e-05 Score=75.52 Aligned_cols=113 Identities=17% Similarity=0.227 Sum_probs=75.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH--HHHHHhcCCCCCeEEEEe----CCCchhhhhCCCcEEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFL----GQPQLENALTGMDLVI 114 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~~----~t~d~~~al~~ADiVI 114 (353)
.++|.|+||+|++|++++..|+..+...+|+++|.+.... ...++.. ..+..+. ...++.+++++.|+||
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~l~~~~~~iD~Vi 79 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA----PCLRFFIGDVRDKERLTRALRGVDYVV 79 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC----CcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence 4689999999999999999998876333899999765221 1112211 1222211 1234556788999999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
+++|....+ ..+..+.+..|+.....+++.+.+.... .+|++|
T Consensus 80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~-~iV~~S 124 (324)
T TIGR03589 80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVK-RVVALS 124 (324)
T ss_pred ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 998864322 2345577889999999999999876533 444444
No 77
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.13 E-value=5.2e-05 Score=72.29 Aligned_cols=113 Identities=17% Similarity=0.128 Sum_probs=73.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCC-CCCeEEEE----eCCCchhhhhCCCcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMD-TGAVVRGF----LGQPQLENALTGMDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~-~~~~v~~~----~~t~d~~~al~~ADiVIi 115 (353)
+||.|+||+|++|++++..|+..|+ +|++++.+.. ......+.... ....+..+ ....++.++++++|+||+
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 5899999999999999999999998 8888877652 11112222111 01122222 112356678899999999
Q ss_pred cCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEe
Q 018618 116 PAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKC-CPNATVNLI 157 (353)
Q Consensus 116 ~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~ 157 (353)
+++........ ..+++..|+....++++.+.+. ... .++++
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~v~~ 125 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK-RVVVT 125 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC-EEEEc
Confidence 98754221122 2366788999999999998876 333 34443
No 78
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.12 E-value=1.7e-05 Score=75.27 Aligned_cols=99 Identities=20% Similarity=0.270 Sum_probs=64.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHH---HHH-----hcCCC--------CCeEEEEeCCCch
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVT---ADI-----SHMDT--------GAVVRGFLGQPQL 103 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~---~dl-----~~~~~--------~~~v~~~~~t~d~ 103 (353)
.||+|||+ |.+|..+|..|+..|+ +|+++|+++ ..... .++ ..... ...++. ++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 75 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY---SLDL 75 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCcH
Confidence 48999999 9999999999999988 999999987 11111 011 01000 012333 3567
Q ss_pred hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCC
Q 018618 104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVN 162 (353)
Q Consensus 104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~ 162 (353)
++++++||+||.+. ..+..+.+.+...+.++++ ++++ ++|.+.
T Consensus 76 ~~~~~~aD~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~il--~~~tSt 119 (288)
T PRK09260 76 KAAVADADLVIEAV--------------PEKLELKKAVFETADAHAPAECYI--ATNTST 119 (288)
T ss_pred HHhhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEcCCC
Confidence 78899999999985 2234445566666777774 5543 455544
No 79
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.12 E-value=3.5e-05 Score=73.75 Aligned_cols=119 Identities=16% Similarity=0.123 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHH--HHHHHhcCCCCCeEEEE----eCCCchhhhhCCCc
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG--VTADISHMDTGAVVRGF----LGQPQLENALTGMD 111 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~--~~~dl~~~~~~~~v~~~----~~t~d~~~al~~AD 111 (353)
..++|+|+||+|++|+.++..|++.|+ +|+--=+++ .+. +..+|.... .++..+ ...+.+..|+++||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~--~~l~l~~aDL~d~~sf~~ai~gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAK--ERLKLFKADLLDEGSFDKAIDGCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCc--ccceEEeccccccchHHHHHhCCC
Confidence 457999999999999999999999999 555444443 222 344555332 112222 12356779999999
Q ss_pred EEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618 112 LVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 163 (353)
Q Consensus 112 iVIi~ag~~~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~ 163 (353)
.|+++|....-... .-.+++.-.++...++.+.+.++. ...=+++|+....
T Consensus 81 gVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aA 132 (327)
T KOG1502|consen 81 GVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAA 132 (327)
T ss_pred EEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHH
Confidence 99999865432222 244788899999999999999887 4444556655433
No 80
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.11 E-value=1.8e-05 Score=75.80 Aligned_cols=119 Identities=24% Similarity=0.353 Sum_probs=71.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcC-------C----CCCeEEEEeCCCchhhhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM-------D----TGAVVRGFLGQPQLENALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~-------~----~~~~v~~~~~t~d~~~al~ 108 (353)
+||+|||+ |.+|..++..|+..|+ +|+++|.++ .......+.+. . ....++. ++|++++++
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~ 78 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM---EAGLAAAVS 78 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE---eCCHHHHhc
Confidence 58999999 9999999999999887 999999876 11111111100 0 0011232 356777899
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618 109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT 187 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t 187 (353)
+||+||++. ........++...+..+++ +++| +||.+.+... ++. .... .+.+++|+.
T Consensus 79 ~aDlVi~av--------------~~~~~~~~~v~~~l~~~~~~~~ii--~s~tsg~~~~---~l~-~~~~-~~~~~ig~h 137 (311)
T PRK06130 79 GADLVIEAV--------------PEKLELKRDVFARLDGLCDPDTIF--ATNTSGLPIT---AIA-QAVT-RPERFVGTH 137 (311)
T ss_pred cCCEEEEec--------------cCcHHHHHHHHHHHHHhCCCCcEE--EECCCCCCHH---HHH-hhcC-CcccEEEEc
Confidence 999999984 2223345556666776664 5543 4555554332 221 2211 245777764
No 81
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.10 E-value=3.3e-05 Score=77.79 Aligned_cols=169 Identities=12% Similarity=0.019 Sum_probs=96.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.|||.|+||+|+||++++..|++.|+ +|+.+|... ....... +.. ...++.+.. +-+..++.++|+||++|+
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~~~~~~~~--~~~-~~~~~~i~~-D~~~~~l~~~D~ViHlAa 192 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTGRKENVMH--HFS-NPNFELIRH-DVVEPILLEVDQIYHLAC 192 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhhh--hcc-CCceEEEEC-CccChhhcCCCEEEEeee
Confidence 48999999999999999999999987 899998643 1111111 111 123333221 122356789999999987
Q ss_pred CCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchh--HHHHHHHHH-hCCCCCCceEeechhhHH
Q 018618 119 VPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTV--PIAAEVFKK-AGTYDPKKLLGVTMLDVV 192 (353)
Q Consensus 119 ~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t--~~~~~~~~~-~~~~~~~kviG~t~ld~~ 192 (353)
... ....+..+.+..|+....++++.+++.. ..+|++|.- +.... ....+-.+. ..-..+...+|.+.....
T Consensus 193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE 270 (442)
T PLN02206 193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAE 270 (442)
T ss_pred ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHH
Confidence 532 1122456678899999999999998775 355555431 11000 000000000 000111234565555555
Q ss_pred HHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 193 RANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 193 R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
++-..+.+..+++..-++ ..++|.+
T Consensus 271 ~~~~~y~~~~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 271 TLTMDYHRGANVEVRIARIFNTYGPR 296 (442)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCC
Confidence 554555566666554443 3466754
No 82
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.09 E-value=6e-05 Score=72.25 Aligned_cols=103 Identities=24% Similarity=0.269 Sum_probs=66.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHH--------HHhcCCC---------CCeEEEEeCCCc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA--------DISHMDT---------GAVVRGFLGQPQ 102 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~--------dl~~~~~---------~~~v~~~~~t~d 102 (353)
.+||+|||+ |.+|+.++..|+..|+ +|+++|+++. ..... .+..... ...++. ++|
T Consensus 2 ~~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~---~~~ 75 (308)
T PRK06129 2 MGSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV---TDS 75 (308)
T ss_pred CcEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE---ECc
Confidence 468999998 9999999999999998 9999999861 11110 1211110 112333 357
Q ss_pred hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCch
Q 018618 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST 164 (353)
Q Consensus 103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~ 164 (353)
+.+++++||+|+.+. ..+....+.+...+.+.+++..++ .||.....
T Consensus 76 ~~~a~~~ad~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~ii-~ssts~~~ 122 (308)
T PRK06129 76 LADAVADADYVQESA--------------PENLELKRALFAELDALAPPHAIL-ASSTSALL 122 (308)
T ss_pred HHHhhCCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCcceE-EEeCCCCC
Confidence 778899999999984 222344455666677777654444 45554433
No 83
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.07 E-value=7e-05 Score=70.74 Aligned_cols=167 Identities=15% Similarity=0.060 Sum_probs=97.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--H-HHHHHHhcCCCCCeEEEEe----CCCchhhhhCC--CcEE
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P-GVTADISHMDTGAVVRGFL----GQPQLENALTG--MDLV 113 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~-~~~~dl~~~~~~~~v~~~~----~t~d~~~al~~--ADiV 113 (353)
||.|+||+|++|++++..|+..+...+|+++|.... . ....++... ..+..+. ...++.+++++ +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN---PRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC---CCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 589999999999999998887763338899986431 1 111222211 1222211 12345566776 8999
Q ss_pred EEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCc----hhHHHHHHHHHhCCCCCCceEee
Q 018618 114 IIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNS----TVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 114 Ii~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~----~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
|.+++.... .......++..|+.....+++.+.+...+..++.+|.. +.. ..+. .......+...+|.
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~-----~e~~~~~~~~~Y~~ 152 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAF-----TETTPLAPSSPYSA 152 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCc-----CCCCCCCCCCchHH
Confidence 999875321 12234456788999999999999877555556555431 100 0000 01112334445676
Q ss_pred chhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 187 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 187 t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
+.....++-..+++..+++..-++ ..++|..
T Consensus 153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY 184 (317)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 655555665666777777654443 4466643
No 84
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.07 E-value=1.9e-05 Score=77.63 Aligned_cols=170 Identities=15% Similarity=0.069 Sum_probs=97.8
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE--EeCCCchhhhhCCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~--~~~t~d~~~al~~ADiVIi~a 117 (353)
.+|||.|+||+|++|++++..|...|+ +|+.+|+.... . +........... .....++..+++++|+||+++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 93 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-H---MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA 93 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-c---cccccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence 457999999999999999999999888 99999975311 0 000000011110 001123345678999999998
Q ss_pred CCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchh-------HHHHHHHHHhCCCCCCceEeec
Q 018618 118 GVPRKPG---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV-------PIAAEVFKKAGTYDPKKLLGVT 187 (353)
Q Consensus 118 g~~~~~g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t-------~~~~~~~~~~~~~~~~kviG~t 187 (353)
+.....+ ......+..|+....++++.+++.....+|...|.-+.--. .+ .+ .....+.+...+|.+
T Consensus 94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~-~E--~~~~p~~p~s~Yg~s 170 (370)
T PLN02695 94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSL-KE--SDAWPAEPQDAYGLE 170 (370)
T ss_pred cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCc-Cc--ccCCCCCCCCHHHHH
Confidence 6432111 12233457899999999999987765544433332111100 00 00 000023345567776
Q ss_pred hhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618 188 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 218 (353)
Q Consensus 188 ~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg 218 (353)
.....++-..+++..|++..-++ ..++|.++
T Consensus 171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 66666665556777787655553 55778654
No 85
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.07 E-value=7.4e-05 Score=70.34 Aligned_cols=163 Identities=15% Similarity=0.088 Sum_probs=107.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCC-CCeEEEEeCCCchhhhh--CCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDT-GAVVRGFLGQPQLENAL--TGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al--~~ADiVIi~a 117 (353)
|+|.|+|++|+||||.+..|++.|+ +++.+|... -...+.+-....+ ..++.. ..-+.+.| ..-|.||..|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D---~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLSNGHKIALLKLQFKFYEGDLLD---RALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCCCCCHHHhhhccCceEEecccc---HHHHHHHHHhcCCCEEEECc
Confidence 6899999999999999999999999 999999865 1112211111111 011111 01112222 4789999998
Q ss_pred CCCCCCCC---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-----cCCCCchhHHHHHHHHHhCCCCCCceEeechh
Q 018618 118 GVPRKPGM---TRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-----SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML 189 (353)
Q Consensus 118 g~~~~~g~---~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-----tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~l 189 (353)
+...- |+ .-..+...|+-....+.+.+.+.+.+-+|.-. ++|..+- + ....-..|.+.+|-|.|
T Consensus 76 a~~~V-gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P--I-----~E~~~~~p~NPYG~sKl 147 (329)
T COG1087 76 ASISV-GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP--I-----SETSPLAPINPYGRSKL 147 (329)
T ss_pred ccccc-chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc--c-----CCCCCCCCCCcchhHHH
Confidence 75422 22 36778899999999999999999977766543 3444311 1 12223457788999999
Q ss_pred hHHHHHHHHHHHhCCCCCCC-cceEEeec
Q 018618 190 DVVRANTFVAEVLGLDPRDV-DVPVVGGH 217 (353)
Q Consensus 190 d~~R~~~~lA~~l~v~~~~v-~~~viG~h 217 (353)
...++-+.+++..+.+..-+ ..-+.|-|
T Consensus 148 m~E~iL~d~~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 148 MSEEILRDAAKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred HHHHHHHHHHHhCCCcEEEEEecccccCC
Confidence 99999999999888654443 33455533
No 86
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.07 E-value=5.1e-05 Score=72.21 Aligned_cols=103 Identities=21% Similarity=0.301 Sum_probs=66.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHH--------HHHhcCC-CC-----CeEEEEeCCCchhhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVT--------ADISHMD-TG-----AVVRGFLGQPQLENA 106 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~--------~dl~~~~-~~-----~~v~~~~~t~d~~~a 106 (353)
.||+|||+ |.+|+.+|..++..|+ +|+++|.++ ....+ .++.... .. ..+.....+++. ++
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~ 80 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNL-EE 80 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCH-HH
Confidence 58999999 9999999999999887 999999976 11111 1122111 00 011111123454 67
Q ss_pred hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST 164 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~ 164 (353)
+++||+||.+. .++.++...+...+.+++ |+++| +||-+.+-
T Consensus 81 ~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~il--~s~tS~i~ 123 (295)
T PLN02545 81 LRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAIL--ASNTSSIS 123 (295)
T ss_pred hCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcEE--EECCCCCC
Confidence 89999999985 445566677777788776 45643 46665543
No 87
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.06 E-value=3.5e-05 Score=78.71 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=69.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHH-------HHh---cCCC--CCeEEEEeCCCchhhhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTA-------DIS---HMDT--GAVVRGFLGQPQLENAL 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~-------dl~---~~~~--~~~v~~~~~t~d~~~al 107 (353)
+||+|||+ |.+|+.+|..|+..|+ +|.++|+++. ..... .+. .... ...++. ++++++++
T Consensus 5 ~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~---~~~~~ea~ 78 (495)
T PRK07531 5 MKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF---CASLAEAV 78 (495)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe---eCCHHHHh
Confidence 58999999 9999999999999998 9999999861 11100 011 0000 012332 35777889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchh
Q 018618 108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV 165 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t 165 (353)
++||+|+.+. .++.++.+.+...+.++++... ++.||.+.+..
T Consensus 79 ~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~ 121 (495)
T PRK07531 79 AGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLP 121 (495)
T ss_pred cCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCH
Confidence 9999999984 3345556667777887775443 44677766553
No 88
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.99 E-value=7.7e-05 Score=66.97 Aligned_cols=97 Identities=20% Similarity=0.305 Sum_probs=65.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
+|+++|+|+ |++|+.++..+...|+ ||.+-..+..+..+...... .+.++. ...++|.+.||+||.+. |
T Consensus 1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l--~~~i~~----~~~~dA~~~aDVVvLAV--P 69 (211)
T COG2085 1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAAL--GPLITG----GSNEDAAALADVVVLAV--P 69 (211)
T ss_pred CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhh--cccccc----CChHHHHhcCCEEEEec--c
Confidence 578999998 9999999999999998 88887666532222211111 233443 23468999999999984 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
.+.+.++.+.++..-.+-+||-.|||.+
T Consensus 70 --------------~~a~~~v~~~l~~~~~~KIvID~tnp~~ 97 (211)
T COG2085 70 --------------FEAIPDVLAELRDALGGKIVIDATNPIE 97 (211)
T ss_pred --------------HHHHHhHHHHHHHHhCCeEEEecCCCcc
Confidence 2224455555554444678888899964
No 89
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=97.97 E-value=7.5e-05 Score=72.36 Aligned_cols=164 Identities=15% Similarity=0.098 Sum_probs=93.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-----CchhhhhCCCcEEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLVI 114 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-----~d~~~al~~ADiVI 114 (353)
+|||.|+||+|++|++++..|+.. ++ +|+.+|..... ..++... ..++.+... ..+.++++++|+||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~~--~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi 73 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTDR--LGDLVNH---PRMHFFEGDITINKEWIEYHVKKCDVIL 73 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHHH--HHHhccC---CCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence 369999999999999999999875 56 89999964311 1122111 123322211 12335678999999
Q ss_pred EcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCch---hHHHHHHHHHhCC------CCCCc
Q 018618 115 IPAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST---VPIAAEVFKKAGT------YDPKK 182 (353)
Q Consensus 115 i~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~---t~~~~~~~~~~~~------~~~~k 182 (353)
++++... ....+.......|+....++++.+++.. ..+|.+|.. +... .++ .+ ..+- .++..
T Consensus 74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~-~e---e~~~~~~~~~~~p~~ 147 (347)
T PRK11908 74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEF-DP---EASPLVYGPINKPRW 147 (347)
T ss_pred ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCc-Cc---cccccccCcCCCccc
Confidence 9887532 2223344556778898899999988764 355555432 1000 000 00 0000 01223
Q ss_pred eEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 183 LLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 183 viG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
.+|.+.....++-..+++..|++..-++ +.++|.+
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 148 IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG 183 (347)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence 5666555554555556666777665554 4577753
No 90
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.96 E-value=4.7e-05 Score=72.96 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=70.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCe-EEE-EeCCCchhhhhCCCcEEEEcCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~-v~~-~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
|||.|+||+|++|++++..|.+.|+ +|+.++++.... ..+.+.. .. +.. .....++.++++++|+||.+++.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~--v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~ 74 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWG--AELVYGDLSLPETLPPSFKGVTAIIDASTS 74 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcC--CEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence 6999999999999999999999887 899998764211 1122111 11 111 11123567889999999998653
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
.. ....++...|.....++++.+++.+-. .+|.+|
T Consensus 75 ~~---~~~~~~~~~~~~~~~~l~~aa~~~gvk-r~I~~S 109 (317)
T CHL00194 75 RP---SDLYNAKQIDWDGKLALIEAAKAAKIK-RFIFFS 109 (317)
T ss_pred CC---CCccchhhhhHHHHHHHHHHHHHcCCC-EEEEec
Confidence 21 112234567888888999998887644 344444
No 91
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.94 E-value=9.2e-05 Score=73.30 Aligned_cols=112 Identities=19% Similarity=0.253 Sum_probs=67.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--------------CCCeEEEEeCCCchhhhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENAL 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--------------~~~~v~~~~~t~d~~~al 107 (353)
|||+|||. |+||..+|..++. |+ +|+.+|+++.+ +..+.... ....+. .+++.+++.
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~~l~---~t~~~~~~~ 71 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKIHFN---ATLDKNEAY 71 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCCcEE---Eecchhhhh
Confidence 69999999 9999999987775 76 99999998621 11222210 011222 235566788
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCchhHH
Q 018618 108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPI 167 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~~t~~ 167 (353)
++||+||++...|...... .-++..+.+.++.+.+..|+.+|++- |-|....-.+
T Consensus 72 ~~ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l 127 (388)
T PRK15057 72 RDADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAM 127 (388)
T ss_pred cCCCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHH
Confidence 9999999997665322111 12233444555555544455555443 5777655444
No 92
>PLN02214 cinnamoyl-CoA reductase
Probab=97.94 E-value=0.00017 Score=70.01 Aligned_cols=169 Identities=15% Similarity=0.043 Sum_probs=97.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HH-HHHHHhcCCCCCeEEEEe----CCCchhhhhCCCcEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PG-VTADISHMDTGAVVRGFL----GQPQLENALTGMDLV 113 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~-~~~dl~~~~~~~~v~~~~----~t~d~~~al~~ADiV 113 (353)
.++|.|+||+|++|++++..|++.|+ +|+.++++.. .. ....+... ...+..+. ...++.++++++|+|
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 45899999999999999999999987 8888887542 11 11122211 11222221 123466788999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC--CCchh-----HHHHHHHHHhC--CCCCCceE
Q 018618 114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP--VNSTV-----PIAAEVFKKAG--TYDPKKLL 184 (353)
Q Consensus 114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP--v~~~t-----~~~~~~~~~~~--~~~~~kvi 184 (353)
|++++... ....+.+..|+.....+++.+.+.... .++++|.- +.... ..+.+-.+... -..+...+
T Consensus 86 ih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~-r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y 161 (342)
T PLN02214 86 FHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVK-RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWY 161 (342)
T ss_pred EEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHH
Confidence 99987542 234566788999999999999877544 34443321 11000 00000000000 00122345
Q ss_pred eechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 185 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 185 G~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
|.+.....++-..+++..|++..-++ ..|+|.+
T Consensus 162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~ 195 (342)
T PLN02214 162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPP 195 (342)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence 55555555565566666677655553 5678864
No 93
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.93 E-value=0.00021 Score=69.33 Aligned_cols=176 Identities=16% Similarity=0.096 Sum_probs=98.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE----eCCCchhhhhCC--CcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALTG--MDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~~--ADiVIi 115 (353)
+||.|+||+|++|++++..|...|. ..++++|.....+....+.+......+... ....++++++++ .|+||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 5899999999999999999998875 246677764321111112211001112211 111234455663 899999
Q ss_pred cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhC-------CC-cEEEEecCC-CCchhHHHHHHHHHhCCCCCCceE
Q 018618 116 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCC-------PN-ATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLL 184 (353)
Q Consensus 116 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kvi 184 (353)
++|..... ..........|+.....+++.+.++. +. ..++.+|.. +.....-....+.......+...+
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y 160 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY 160 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence 99864321 12345677889999999999988752 12 245544432 111000000000011123344557
Q ss_pred eechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618 185 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 218 (353)
Q Consensus 185 G~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg 218 (353)
|.+.+...++-..+++..+++..-++ ..++|.+.
T Consensus 161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 77777777777777888887665553 56777653
No 94
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.92 E-value=0.00019 Score=71.56 Aligned_cols=117 Identities=25% Similarity=0.318 Sum_probs=72.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--C--------------CCeEEEEeCCCchhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLEN 105 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~--------------~~~v~~~~~t~d~~~ 105 (353)
|||+|||. |.+|..+|..|+..|+ +|+++|+++.+ +.++.... . ...++. ++++.+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~---~~~~~~ 72 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEK--VDKLNKGKSPIYEPGLDELLAKALAAGRLRA---TTDYED 72 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHH--HHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE---ECCHHH
Confidence 68999999 9999999999999998 89999997622 12222211 0 012332 356777
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHHHHHHH
Q 018618 106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVF 172 (353)
Q Consensus 106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~~~~~~ 172 (353)
++++||+||++.+.|..... .-+...+.+.++.+.++. ++.+|++. |-|......+...++
T Consensus 73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~ 135 (411)
T TIGR03026 73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPIL 135 (411)
T ss_pred HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHH
Confidence 89999999999876643221 112333445555555543 45555544 355555444433333
No 95
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.92 E-value=2.5e-05 Score=61.32 Aligned_cols=94 Identities=20% Similarity=0.213 Sum_probs=61.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEE-eCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~-D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
||+|||+ |++|++++..|...+ ...+|.++ ++++. ...++.... . +..+ +.+..+++++||+||++.-..
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~--~~~~~~~~~-~--~~~~--~~~~~~~~~~advvilav~p~ 72 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPE--KAAELAKEY-G--VQAT--ADDNEEAAQEADVVILAVKPQ 72 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHH--HHHHHHHHC-T--TEEE--SEEHHHHHHHTSEEEE-S-GG
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHH--HHHHHHHhh-c--cccc--cCChHHhhccCCEEEEEECHH
Confidence 7999998 999999999999888 23488866 87652 222232111 1 1221 124578899999999985211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 160 (353)
.+.++++.+....++..+|-++||
T Consensus 73 ----------------~~~~v~~~i~~~~~~~~vis~~ag 96 (96)
T PF03807_consen 73 ----------------QLPEVLSEIPHLLKGKLVISIAAG 96 (96)
T ss_dssp ----------------GHHHHHHHHHHHHTTSEEEEESTT
T ss_pred ----------------HHHHHHHHHhhccCCCEEEEeCCC
Confidence 255677777445578888777775
No 96
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.91 E-value=9.4e-05 Score=69.85 Aligned_cols=168 Identities=18% Similarity=0.127 Sum_probs=98.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC-cEEEEcCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM-DLVIIPAGVP 120 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A-DiVIi~ag~~ 120 (353)
|+|.|+||+|++|++++..|.+.|+ +|+.+|.........+ .+... ...... ......+++++. |.||++++..
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~~-~~~d~~-~~~~~~~~~~~~~d~vih~aa~~ 75 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVEF-VVLDLT-DRDLVDELAKGVPDAVIHLAAQS 75 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccce-eeeccc-chHHHHHHHhcCCCEEEEccccC
Confidence 3599999999999999999999988 9999998652111111 11110 001100 012234556677 9999998866
Q ss_pred CCCCCCH---HHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC-CCCchh---HHHHHHHHHh-CCCCCCceEeechhhHH
Q 018618 121 RKPGMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV---PIAAEVFKKA-GTYDPKKLLGVTMLDVV 192 (353)
Q Consensus 121 ~~~g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN-Pv~~~t---~~~~~~~~~~-~~~~~~kviG~t~ld~~ 192 (353)
..++..+ .++...|+...+++++..++ +.-..++..|. .+..-. ..+. .. ....|...+|.+.+...
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~~~~~~~~~~----E~~~~~~p~~~Yg~sK~~~E 150 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVYGDPPPLPID----EDLGPPRPLNPYGVSKLAAE 150 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceECCCCCCCCcc----cccCCCCCCCHHHHHHHHHH
Confidence 5444322 35789999999999999998 33333443322 111100 0001 11 11112224677766666
Q ss_pred HHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018618 193 RANTFVAEVLGLDPRDVD-VPVVGGHAG 219 (353)
Q Consensus 193 R~~~~lA~~l~v~~~~v~-~~viG~hg~ 219 (353)
+.-...++..+++..-++ +.++|....
T Consensus 151 ~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 151 QLLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred HHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 665666666677777775 468886544
No 97
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=97.91 E-value=0.00014 Score=70.37 Aligned_cols=176 Identities=15% Similarity=0.109 Sum_probs=99.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE----eCCCchhhhhC--CCcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALT--GMDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~--~ADiVIi 115 (353)
|||.|+||+|++|++++..|+..|.. .++.+|.....+....+........+..+ ....++.++++ ++|+||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 68999999999999999999888752 46667754311111111111001112211 11123445565 4799999
Q ss_pred cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhC-------CC-cEEEEecCC-CCchhHHHH--------HHHHHhC
Q 018618 116 PAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCC-------PN-ATVNLISNP-VNSTVPIAA--------EVFKKAG 176 (353)
Q Consensus 116 ~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~tNP-v~~~t~~~~--------~~~~~~~ 176 (353)
+|+.... ......+++..|+.....+++.+.++. .. ..++.+|-. +......-- ..+....
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 9986421 112345678899999999999998752 12 244444332 111000000 0000111
Q ss_pred CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618 177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 218 (353)
Q Consensus 177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg 218 (353)
.+.+...+|.+.....++-..+++.+|++...++ ..|+|.+.
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 2345567888777777776777888887765554 55778653
No 98
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.90 E-value=0.0001 Score=70.11 Aligned_cols=111 Identities=18% Similarity=0.215 Sum_probs=73.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
|||.|+||+|++|++++..|...|. +|+++|++..... ++.+... ..+.. .....++.++++++|+||..++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~-~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDRR--NLEGLDV-EIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCcccc--ccccCCc-eEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 5899999999999999999999887 8999998652111 1111110 11111 111134567788999999988643
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
.....+..+....|+.....+++.+.+..-. .+++.|
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 112 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTS 112 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence 2223445667788999999999988876533 344444
No 99
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.87 E-value=0.00042 Score=73.30 Aligned_cols=181 Identities=15% Similarity=0.027 Sum_probs=99.3
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cc---hhhhh--CCCc
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ---LENAL--TGMD 111 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d---~~~al--~~AD 111 (353)
+-+++||.|+||+|++|++++..|.+.+...+|+.+|..........+........++.+... +| +...+ .++|
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 82 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGID 82 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence 345689999999999999999999887433389999975311111111111111233332211 22 22222 6899
Q ss_pred EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHH-HHHHHhCCCCCCceEeec
Q 018618 112 LVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAA-EVFKKAGTYDPKKLLGVT 187 (353)
Q Consensus 112 iVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~-~~~~~~~~~~~~kviG~t 187 (353)
+||++|+...... ....++...|+.....+++.+++.+.-..+|.+|.- +.-...--. ..........|...+|.+
T Consensus 83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s 162 (668)
T PLN02260 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT 162 (668)
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence 9999988643211 123456788999999999999887633345554431 100000000 000000112233456766
Q ss_pred hhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618 188 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 218 (353)
Q Consensus 188 ~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg 218 (353)
.+...++-..+++..+++..-++ ..|+|.+.
T Consensus 163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 66666665556666677654444 55777553
No 100
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.85 E-value=0.00044 Score=66.14 Aligned_cols=175 Identities=17% Similarity=0.068 Sum_probs=97.6
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhc-CCCCCeEEEE----eCCCchhhhhCCCcEEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISH-MDTGAVVRGF----LGQPQLENALTGMDLVI 114 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~-~~~~~~v~~~----~~t~d~~~al~~ADiVI 114 (353)
.++|.|+||+|++|++++..|+..|+ +|++++++... .....+.. ......+..+ ....++++++++.|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 35899999999999999999999988 88877765421 11111111 1111222222 11234567788999999
Q ss_pred EcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHH---H-HHHHHHhCCC------CCCc
Q 018618 115 IPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPI---A-AEVFKKAGTY------DPKK 182 (353)
Q Consensus 115 i~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~---~-~~~~~~~~~~------~~~k 182 (353)
+++|..... . ......+..|+.....+.+.+.++.....++++|.-....... . ...+....-. ++..
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 999853211 1 1234567889999999999988754223444443211100000 0 0000000001 1124
Q ss_pred eEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 183 LLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 183 viG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
.+|.+.+...++-..+++..|++..-++ +.++|..
T Consensus 163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence 5677666666666666777777655443 5567754
No 101
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.84 E-value=9.9e-05 Score=70.66 Aligned_cols=117 Identities=21% Similarity=0.375 Sum_probs=78.0
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc--CC--CC------CeEEEEeCCCchhhhhCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH--MD--TG------AVVRGFLGQPQLENALTGM 110 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~--~~--~~------~~v~~~~~t~d~~~al~~A 110 (353)
++||+|+|+ |.-|.++|..|+.+++ ++.|..+++ ..+.++.. .. +. +.+. .++|+.+++++|
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~--~~~~~i~~~~~N~~yLp~i~lp~~l~---at~Dl~~a~~~a 72 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDE--EIVAEINETRENPKYLPGILLPPNLK---ATTDLAEALDGA 72 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCH--HHHHHHHhcCcCccccCCccCCcccc---cccCHHHHHhcC
Confidence 479999999 9999999999999997 899999876 22223332 22 11 2233 367999999999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec---CCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS---NPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t---NPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
|+||+.. | .+.++++++++..+- ++..++.+| +|-.. .++++++++. +|.++ ++.
T Consensus 73 d~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~--~l~seii~e~--l~~~~-~~v 131 (329)
T COG0240 73 DIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETG--RLLSEIIEEE--LPDNP-IAV 131 (329)
T ss_pred CEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCc--chHHHHHHHH--cCCCe-EEE
Confidence 9999974 3 344677777776444 677777776 34321 2235555554 34444 444
No 102
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.83 E-value=0.00035 Score=67.54 Aligned_cols=160 Identities=13% Similarity=0.031 Sum_probs=91.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHh-cCC--CCCeEEEEeC----CCchhhhhCC--
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADIS-HMD--TGAVVRGFLG----QPQLENALTG-- 109 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~-~~~--~~~~v~~~~~----t~d~~~al~~-- 109 (353)
+||.|+||+|++|++++..|+..|. +|+++|++.. ......+. +.. ....+..+.. ...+.+++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 4899999999999999999999988 9999997641 11111111 000 0112222211 1234455664
Q ss_pred CcEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHhhC-CC-cEEEEecC-CCCchhHHHHHHHHHhCCCCCCceE
Q 018618 110 MDLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCC-PN-ATVNLISN-PVNSTVPIAAEVFKKAGTYDPKKLL 184 (353)
Q Consensus 110 ADiVIi~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~-p~-a~viv~tN-Pv~~~t~~~~~~~~~~~~~~~~kvi 184 (353)
.|+||++|+..... . .........|+.....+++.+.+.+ .. ..++.+|. -+.--..-. .......+.|...+
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~~E~~~~~p~~~Y 156 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI--PQNETTPFYPRSPY 156 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC--CCCCCCCCCCCChh
Confidence 59999999864321 1 1233445668888889999988765 32 34444332 111000000 00011223455667
Q ss_pred eechhhHHHHHHHHHHHhCCC
Q 018618 185 GVTMLDVVRANTFVAEVLGLD 205 (353)
Q Consensus 185 G~t~ld~~R~~~~lA~~l~v~ 205 (353)
|.+.+...++-..+++.++++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~ 177 (343)
T TIGR01472 157 AAAKLYAHWITVNYREAYGLF 177 (343)
T ss_pred HHHHHHHHHHHHHHHHHhCCc
Confidence 877777777777777777765
No 103
>PLN02572 UDP-sulfoquinovose synthase
Probab=97.83 E-value=0.00024 Score=71.62 Aligned_cols=176 Identities=14% Similarity=0.115 Sum_probs=100.8
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHH------------HHHHH---hcCCCCCeEEEEeC--
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPG------------VTADI---SHMDTGAVVRGFLG-- 99 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~------------~~~dl---~~~~~~~~v~~~~~-- 99 (353)
+.+||.|+||+|++|++++..|+..|. +|+++|... ... ....+ .+.. ...++.+..
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~~v~~Dl 122 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS-GKEIELYVGDI 122 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHhh-CCcceEEECCC
Confidence 357899999999999999999999987 899998422 000 00011 1000 011222211
Q ss_pred --CCchhhhhC--CCcEEEEcCCCCCCC-CC-C---HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCc-----h
Q 018618 100 --QPQLENALT--GMDLVIIPAGVPRKP-GM-T---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNS-----T 164 (353)
Q Consensus 100 --t~d~~~al~--~ADiVIi~ag~~~~~-g~-~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~-----~ 164 (353)
..+++++++ ++|+||++|+....+ .. + ....+..|+....++++.+++++....++.+| .-+.. +
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~ 202 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDI 202 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCC
Confidence 123445565 489999998653211 11 1 12345689999999999999887654454433 21110 0
Q ss_pred h--HH-HHHHHHHh---CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618 165 V--PI-AAEVFKKA---GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 218 (353)
Q Consensus 165 t--~~-~~~~~~~~---~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg 218 (353)
. ++ ..+..... .-..|...+|.+.+....+...+++..|++..-++ +.++|.+.
T Consensus 203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 0 00 00000000 01234467898877766777778888888766664 66888653
No 104
>PLN02778 3,5-epimerase/4-reductase
Probab=97.82 E-value=0.00033 Score=66.76 Aligned_cols=90 Identities=22% Similarity=0.164 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh--CCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al--~~ADiVIi~a 117 (353)
..|||.|+||+|++|++++..|...|+ ++++...+... .. .+..++ .++|+||++|
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~~~-----~~---------------~v~~~l~~~~~D~ViH~A 65 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRLEN-----RA---------------SLEADIDAVKPTHVFNAA 65 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCccCC-----HH---------------HHHHHHHhcCCCEEEECC
Confidence 458999999999999999999998887 76644321100 00 011122 2689999999
Q ss_pred CCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhhCCC
Q 018618 118 GVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 151 (353)
Q Consensus 118 g~~~~~g-----~~r~~~~~~N~~i~~~i~~~i~~~~p~ 151 (353)
+....+. ....+....|+....++++.+++.+..
T Consensus 66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~ 104 (298)
T PLN02778 66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV 104 (298)
T ss_pred cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8643222 235677889999999999999987543
No 105
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.82 E-value=0.00021 Score=68.60 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=70.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC-CCCe-EEE-EeCCCchhhhhC--CCcEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAV-VRG-FLGQPQLENALT--GMDLVI 114 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~-~~~~-v~~-~~~t~d~~~al~--~ADiVI 114 (353)
|||.|+||+|++|++++..|+..|. +|+++|... .......+.+.. .... +.. ......+.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999998887 889998643 111111122111 0111 111 111112334454 689999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
++++..... .....+.+..|+.....+++.+++.... .++.+|
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 123 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NLIFSS 123 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence 998754311 1234567889999999999998876433 344444
No 106
>PRK06194 hypothetical protein; Provisional
Probab=97.81 E-value=0.00031 Score=65.91 Aligned_cols=158 Identities=19% Similarity=0.138 Sum_probs=90.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT------- 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------- 108 (353)
++|.|+||+|++|++++..|+..|. +|+++|.+. ......++... ...+..+.. -+| ++++++
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999987 899999875 23333334322 123322211 122 223333
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCC-----cEEEEecCCCCchhHHHHHHHH
Q 018618 109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPN-----ATVNLISNPVNSTVPIAAEVFK 173 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~-----a~viv~tNPv~~~t~~~~~~~~ 173 (353)
..|+||..+|..... ..+. ...+..|+.....+++. +.+.+.. +.++++|.-....
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------- 153 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL--------- 153 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc---------
Confidence 469999999864321 1222 23355665555444444 5544432 4555554422111
Q ss_pred HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 174 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 174 ~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
+.+..-.++.+......+...+++.++.....+++..+.
T Consensus 154 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~ 192 (287)
T PRK06194 154 ---APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC 192 (287)
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEE
Confidence 223334566665555566677777777665566655544
No 107
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.78 E-value=0.00025 Score=68.01 Aligned_cols=100 Identities=22% Similarity=0.342 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCC------CCCeEEEEeCCCchhhhhCCCcE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMD------TGAVVRGFLGQPQLENALTGMDL 112 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~------~~~~v~~~~~t~d~~~al~~ADi 112 (353)
+|||+|||+ |.+|+.++..|+..|+ ++.++|+++.. ....+..+.. ....+.. +++.+++++++|+
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~ 74 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRA---TTDLAEALADADL 74 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEE---eCCHHHHHhCCCE
Confidence 479999999 9999999999999888 89999987521 1111100100 0012222 2466678899999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618 113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN 162 (353)
Q Consensus 113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~ 162 (353)
||++... ..+.++++.+..+. |+.+++..+|-++
T Consensus 75 vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~ 109 (325)
T PRK00094 75 ILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE 109 (325)
T ss_pred EEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence 9998521 12445555666554 6777887876654
No 108
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.78 E-value=0.00025 Score=68.91 Aligned_cols=173 Identities=17% Similarity=0.093 Sum_probs=96.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH--HHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLG----QPQLENALTGMDLV 113 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiV 113 (353)
..|||.|+||+|++|++++..|++.|. +|++++.+.... ...++.. ...+..+.. ..++++++++.|+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVKGCDGV 83 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence 357999999999999999999999887 888887654211 1112221 122332211 12345667889999
Q ss_pred EEcCCCCCCC---C-CCHH-----HHHHHHHHHHHHHHHHHHhhCCCcEEEEecC-CCCchh-------HHHHHH----H
Q 018618 114 IIPAGVPRKP---G-MTRD-----DLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV-------PIAAEV----F 172 (353)
Q Consensus 114 Ii~ag~~~~~---g-~~r~-----~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN-Pv~~~t-------~~~~~~----~ 172 (353)
|++|+..... . .+.. ..+..|+.....+++.+.++..-..++++|. -+.... ....+- .
T Consensus 84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~ 163 (353)
T PLN02896 84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI 163 (353)
T ss_pred EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence 9998864211 1 1222 2334456778888888876632234554443 111000 000000 0
Q ss_pred HH-hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 173 KK-AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 173 ~~-~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
.. ....++.-.+|.+.+...++-..+++..+++..-++ ..|+|.+
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~ 210 (353)
T PLN02896 164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPF 210 (353)
T ss_pred HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Confidence 00 000112236777777777777777887777554443 4566754
No 109
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.78 E-value=0.0007 Score=64.76 Aligned_cols=105 Identities=14% Similarity=0.078 Sum_probs=67.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcC-CCCCeEEEEe----CCCchhhhhCCCcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRGFL----GQPQLENALTGMDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~-~~~~~v~~~~----~t~d~~~al~~ADiVIi 115 (353)
++|.|+||+|++|++++..|+..|+ +|++...+. .......+... .....+..+. ...++.++++++|+||+
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 5999999999999999999999887 777555443 21122222211 1112233221 12345677889999999
Q ss_pred cCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018618 116 PAGVPRK-PGMTRDDLFNINAGIVRTLCEGIAKC 148 (353)
Q Consensus 116 ~ag~~~~-~g~~r~~~~~~N~~i~~~i~~~i~~~ 148 (353)
+|+.... ......+++..|+.....+++.+.+.
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~ 117 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKET 117 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence 9875321 11123345678999999999988765
No 110
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.77 E-value=0.00028 Score=72.67 Aligned_cols=116 Identities=14% Similarity=0.089 Sum_probs=73.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcC-----C--CCCeEEEEe----CCCchhhh
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHM-----D--TGAVVRGFL----GQPQLENA 106 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~-----~--~~~~v~~~~----~t~d~~~a 106 (353)
....|.|+||+|++|+.++..|+..|+ +|++++++.. ......+.+. . ....+..+. ...+++++
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 345799999999999999999999887 8999988762 2222222110 0 001122221 11345567
Q ss_pred hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
+.++|+||+++|............+..|......+++.+.+..-. .||++|
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg-RIV~VS 207 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVN-HFILVT 207 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCC-EEEEEc
Confidence 899999999987653221222334567888888999988876543 444444
No 111
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.76 E-value=0.00027 Score=69.36 Aligned_cols=107 Identities=16% Similarity=0.289 Sum_probs=71.0
Q ss_pred hhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCC-----CcEEEEEeCCCc---HHHHHHHhcC--C--C---
Q 018618 26 SCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT---PGVTADISHM--D--T--- 90 (353)
Q Consensus 26 ~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~-----~~el~L~D~~~~---~~~~~dl~~~--~--~--- 90 (353)
++|.+-.|++. ||+|||+ |.-|+++|..|..++. ..+|.|+.+++. +..+.++++. . +
T Consensus 2 ~~~~~~~~~~~------ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~ 74 (365)
T PTZ00345 2 SLFQKLRCGPL------KVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPG 74 (365)
T ss_pred cchhhcccCCC------eEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCC
Confidence 46666666665 9999999 9999999999998762 238888887762 2234444432 1 1
Q ss_pred ---CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh--hC-CCcEEEEec
Q 018618 91 ---GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK--CC-PNATVNLIS 158 (353)
Q Consensus 91 ---~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~--~~-p~a~viv~t 158 (353)
+..+.. ++|+.+++++||+||++. | .+.++++++.++. +- +++++|.++
T Consensus 75 ~~Lp~ni~~---tsdl~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 75 IKLPDNIVA---VSDLKEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred CcCCCceEE---ecCHHHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence 123443 467888999999999974 2 3346777777776 33 345565554
No 112
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.76 E-value=0.00058 Score=64.76 Aligned_cols=104 Identities=20% Similarity=0.200 Sum_probs=63.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC-CCeEEE-EeCCCchhhhhCCCcEEEEcCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRG-FLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-~~~v~~-~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
|||+|+|+ |.+|+.++..|.+.|. +|.++|+++.......-..... ...... ....++.++ .+++|+||++...
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~k~ 76 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAVKA 76 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEeccc
Confidence 68999999 9999999999999887 9999998551111110011100 011111 011345444 4999999998532
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchh
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTV 165 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t 165 (353)
. -+.++++.+..+ .++..|+...|.++...
T Consensus 77 ~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~ 107 (304)
T PRK06522 77 Y----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLE 107 (304)
T ss_pred c----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHH
Confidence 1 134455555544 36678888889887654
No 113
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.70 E-value=0.00047 Score=60.16 Aligned_cols=93 Identities=25% Similarity=0.304 Sum_probs=65.4
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCCcEEEEcCCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~ADiVIi~ag~ 119 (353)
|+|+||+|++|+.++..|.+.+. +|+++-+++.+.. + ...++.+... +++.++++++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~~--~------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKAE--D------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGHH--H------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhcc--c------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 78999999999999999999996 9999988763211 1 1233332221 3457889999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
+.+ ..+..+.+++.+++.... .++++|
T Consensus 71 ~~~-----------~~~~~~~~~~a~~~~~~~-~~v~~s 97 (183)
T PF13460_consen 71 PPK-----------DVDAAKNIIEAAKKAGVK-RVVYLS 97 (183)
T ss_dssp TTT-----------HHHHHHHHHHHHHHTTSS-EEEEEE
T ss_pred hcc-----------cccccccccccccccccc-cceeee
Confidence 533 177788888888876544 344433
No 114
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.70 E-value=0.00058 Score=64.93 Aligned_cols=119 Identities=12% Similarity=0.144 Sum_probs=72.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC-----CCeEEE-EeCCCchhhhhCCCcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-----GAVVRG-FLGQPQLENALTGMDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-----~~~v~~-~~~t~d~~~al~~ADiVIi 115 (353)
|||+|+|+ |.+|..++..|.+.|+ +|.++++ +.. ...+.+... ...... ....++.+++.+++|+||+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r-~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vil 74 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVR-PKR--AKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVIL 74 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEec-HHH--HHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEE
Confidence 69999999 9999999999999887 8999998 411 111221110 011110 0012455555689999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe-echh
Q 018618 116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG-VTML 189 (353)
Q Consensus 116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG-~t~l 189 (353)
+.... .+.++++.+..+- ++..|+.+.|.++....+ .+. +|++++++ ++..
T Consensus 75 avk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~l-----~~~--~~~~~v~~g~~~~ 127 (305)
T PRK12921 75 AVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQL-----EPY--FGRERVLGGVVFI 127 (305)
T ss_pred Eeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHHH-----HHh--CCcccEEEEEEEE
Confidence 85322 1344555555543 567777888988755322 222 56667774 4443
No 115
>PLN02583 cinnamoyl-CoA reductase
Probab=97.68 E-value=0.00091 Score=63.51 Aligned_cols=104 Identities=14% Similarity=0.103 Sum_probs=68.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cH---HHHHHHhcCCCCCeEEEEe----CCCchhhhhCCCcEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TP---GVTADISHMDTGAVVRGFL----GQPQLENALTGMDLV 113 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~---~~~~dl~~~~~~~~v~~~~----~t~d~~~al~~ADiV 113 (353)
++|+|+||+|++|++++..|++.|+ +|++++++. .. ....++... ...+..+. ...++.+++.++|.|
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~~~d~v 82 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALKGCSGL 82 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHcCCCEE
Confidence 4799999999999999999999998 888887643 11 111222111 11222221 123456789999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618 114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC 149 (353)
Q Consensus 114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~ 149 (353)
+..++.+........+++..|+.....+.+.+.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~ 118 (297)
T PLN02583 83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD 118 (297)
T ss_pred EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 876543322111235677899999999999988763
No 116
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.66 E-value=0.00047 Score=66.76 Aligned_cols=101 Identities=21% Similarity=0.225 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC------CCeE----EEEeCCCchhhhhCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------GAVV----RGFLGQPQLENALTGM 110 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~------~~~v----~~~~~t~d~~~al~~A 110 (353)
+|||+|||+ |.+|+.++..|...|+ +|.++|+++.. ..+..... .... ..+..+++. ++++++
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 74 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIG---DELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATA 74 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHH---HHHHhcCceeecCCCcceecccceeEeccCh-hhccCC
Confidence 479999999 9999999999999987 89999975411 11111100 0000 001113454 578999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST 164 (353)
Q Consensus 111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~ 164 (353)
|+||++...+. ..++++.+..+. ++.+|+..+|..+..
T Consensus 75 D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~ 113 (341)
T PRK08229 75 DLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA 113 (341)
T ss_pred CEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence 99999863221 123445555543 667777788887654
No 117
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.65 E-value=0.0003 Score=61.06 Aligned_cols=65 Identities=17% Similarity=0.244 Sum_probs=46.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
++||++||. |.+|+.++..|...|+ +|+.||+++ ....++.+.. .+.. .++++++++||+|+.+.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~--~~~~~~~~~g----~~~~---~s~~e~~~~~dvvi~~v 65 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSP--EKAEALAEAG----AEVA---DSPAEAAEQADVVILCV 65 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSH--HHHHHHHHTT----EEEE---SSHHHHHHHBSEEEE-S
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccch--hhhhhhHHhh----hhhh---hhhhhHhhcccceEeec
Confidence 479999999 9999999999999998 999999865 2233344321 3332 45688999999999973
No 118
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.65 E-value=0.00067 Score=64.39 Aligned_cols=160 Identities=10% Similarity=0.087 Sum_probs=87.7
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc-hhhhh-----CCCcEEEEcC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TGMDLVIIPA 117 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d-~~~al-----~~ADiVIi~a 117 (353)
|.|+||+|++|++++..|+..|+ ..+.++|..........+.+... ..... ..+ .+.++ .++|+||++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~-~d~~~---~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLDI-ADYMD---KEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhhh-hhhhh---HHHHHHHHhcccccCCccEEEECc
Confidence 78999999999999999998886 24667787541111011111110 00000 011 12222 3799999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC------CCchhHHHHHHHHHhCCCCCCceEeechhhH
Q 018618 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP------VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 191 (353)
Q Consensus 118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP------v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~ 191 (353)
+.+.........+...|+....++.+.+.+... .+|..|.. .+... .......|...+|.+....
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~SS~~vyg~~~~~~~-------~E~~~~~p~~~Y~~sK~~~ 147 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTDDFI-------EEREYEKPLNVYGYSKFLF 147 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEcchHHhCcCCCCCC-------ccCCCCCCCCHHHHHHHHH
Confidence 754333334445678899999999999987653 34444331 11000 0111122334566665544
Q ss_pred HHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 192 VRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 192 ~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
.++-..+++..+++..-++ ..++|.+
T Consensus 148 E~~~~~~~~~~~~~~~~lR~~~vyG~~ 174 (308)
T PRK11150 148 DEYVRQILPEANSQICGFRYFNVYGPR 174 (308)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeecCCC
Confidence 4444445555565544443 5677754
No 119
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.64 E-value=0.00043 Score=66.73 Aligned_cols=98 Identities=18% Similarity=0.384 Sum_probs=64.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc----CC------CCCeEEEEeCCCchhhhh-CCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH----MD------TGAVVRGFLGQPQLENAL-TGM 110 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~----~~------~~~~v~~~~~t~d~~~al-~~A 110 (353)
|||+|+|| |.+|+.++..|.+.|. +|.++++++. .+..+.. .. ....++. ++|.++++ .++
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~--~~~~i~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~ 72 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHT--TFESINTKRKNLKYLPTCHLPDNISV---KSAIDEVLSDNA 72 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHH--HHHHHHHcCCCcccCCCCcCCCCeEE---eCCHHHHHhCCC
Confidence 68999999 9999999999999887 8999998652 2222221 11 1112333 34666666 589
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-h-CCCcEEEEecCCCCc
Q 018618 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C-CPNATVNLISNPVNS 163 (353)
Q Consensus 111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~-~p~a~viv~tNPv~~ 163 (353)
|+||++.. ...+.++++.+.. + .++..++..+|=.+.
T Consensus 73 Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~ 111 (326)
T PRK14620 73 TCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIEK 111 (326)
T ss_pred CEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCeeC
Confidence 99999852 1224555566654 3 367777777776643
No 120
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.63 E-value=0.00029 Score=65.86 Aligned_cols=98 Identities=21% Similarity=0.253 Sum_probs=67.3
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKP 123 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~ 123 (353)
|.|+||+|++|++++..|+..|+ +|+.++++...... +.. ..+..... .+..++++++|+||++++.+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~----~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKW----EGYKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccc----eeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 57999999999999999998887 99999987621100 000 00111111 23457889999999999865432
Q ss_pred C-C---CHHHHHHHHHHHHHHHHHHHHhhCC
Q 018618 124 G-M---TRDDLFNINAGIVRTLCEGIAKCCP 150 (353)
Q Consensus 124 g-~---~r~~~~~~N~~i~~~i~~~i~~~~p 150 (353)
+ . ....+...|+...+.+++.+++...
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 102 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQ 102 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence 2 1 2345567799999999999998764
No 121
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.63 E-value=0.0013 Score=66.04 Aligned_cols=114 Identities=16% Similarity=0.154 Sum_probs=69.2
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC------------CCeEEEEeCCCchhh
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------GAVVRGFLGQPQLEN 105 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~------------~~~v~~~~~t~d~~~ 105 (353)
+.++|||+|||- |+||..+|..|+. ++ +|+.||+++. .+..|..... ...+.. +++. +
T Consensus 3 ~~~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~--~ve~l~~G~~~~~e~~~~~l~~~g~l~~---t~~~-~ 72 (425)
T PRK15182 3 GIDEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKK--RILELKNGVDVNLETTEEELREARYLKF---TSEI-E 72 (425)
T ss_pred CCCCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHH--HHHHHHCcCCCCCCCCHHHHHhhCCeeE---EeCH-H
Confidence 356799999998 9999999999877 45 9999999862 2233332211 011222 3454 5
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEE-ecCCCCchhHH
Q 018618 106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL-ISNPVNSTVPI 167 (353)
Q Consensus 106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~t~~ 167 (353)
++++||++|++.+.|..... ..++..+....+.|.++. +..+||+ .|-|....-.+
T Consensus 73 ~~~~advvii~Vptp~~~~~------~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~ 130 (425)
T PRK15182 73 KIKECNFYIITVPTPINTYK------QPDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEE 130 (425)
T ss_pred HHcCCCEEEEEcCCCCCCCC------CcchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHH
Confidence 78999999999887753321 112233334444555444 3444444 35666555433
No 122
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.63 E-value=0.0004 Score=66.58 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
..|||+|+|+ |.+|++++..|...|+ +|.++|+++. .++++++++||+||++..
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp- 56 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAVS- 56 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEECC-
Confidence 3579999999 9999999999999998 9999998641 245677899999999842
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecC
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISN 159 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tN 159 (353)
.+.++++++.+..+ .++.+++..|+
T Consensus 57 ---------------~~~~~~v~~~l~~~~~~~~~ivi~~s~ 83 (308)
T PRK14619 57 ---------------MKGVRPVAEQVQALNLPPETIIVTATK 83 (308)
T ss_pred ---------------hHHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 12355566666543 46777777776
No 123
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.62 E-value=0.00043 Score=66.77 Aligned_cols=161 Identities=14% Similarity=0.047 Sum_probs=91.2
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhc-C-CCCCeEEEEe----CCCchhhhhC
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISH-M-DTGAVVRGFL----GQPQLENALT 108 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~-~-~~~~~v~~~~----~t~d~~~al~ 108 (353)
..+.++|.|+||+|++|++++..|+..|. +|+++|.+.. ......+.. . .....+..+. ...+++++++
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD 80 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence 34557999999999999999999999988 8999987541 111111210 0 0011222211 1123445565
Q ss_pred C--CcEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHhhCCC----cEEEEec-CCCCchh--HHHHHHHHHhCC
Q 018618 109 G--MDLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPN----ATVNLIS-NPVNSTV--PIAAEVFKKAGT 177 (353)
Q Consensus 109 ~--ADiVIi~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~----a~viv~t-NPv~~~t--~~~~~~~~~~~~ 177 (353)
+ .|+||++|+..... . ......+..|+.....+++.+.++... ..++.+| .-+.... ++ .....
T Consensus 81 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~-----~E~~~ 155 (340)
T PLN02653 81 DIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQ-----SETTP 155 (340)
T ss_pred HcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCC-----CCCCC
Confidence 4 59999999864321 1 123344577888899999999887643 2444443 1111000 00 01111
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCC
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLD 205 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~ 205 (353)
+.+...+|.+.....++-..+++.++++
T Consensus 156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~ 183 (340)
T PLN02653 156 FHPRSPYAVAKVAAHWYTVNYREAYGLF 183 (340)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHcCCe
Confidence 2344567777666666666677777753
No 124
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.62 E-value=0.00018 Score=68.46 Aligned_cols=99 Identities=18% Similarity=0.166 Sum_probs=65.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV 119 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag~ 119 (353)
|||.|+||+|++|++++..|...| +++.+|..... ...|+.+ ...++++++ ++|+||++++.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~~-~~~Dl~d------------~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHSTD-YCGDFSN------------PEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEecccccc-ccCCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence 689999999999999999998777 46777864310 0001111 123345555 58999999875
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 120 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 120 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
.... ..........|+....++++.+++.+ ..++.+|
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~S 103 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYS 103 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEc
Confidence 4221 12334445789999999999998875 3454444
No 125
>PLN02686 cinnamoyl-CoA reductase
Probab=97.57 E-value=0.00048 Score=67.60 Aligned_cols=176 Identities=13% Similarity=0.091 Sum_probs=95.4
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcC---C-CCCeEEEEe----CCCchhhhhCC
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM---D-TGAVVRGFL----GQPQLENALTG 109 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~---~-~~~~v~~~~----~t~d~~~al~~ 109 (353)
...++|.|+||+|++|++++..|++.|+ +|+++..+... ....++... . ....+..+. ...++.+++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 4467999999999999999999999998 88776554311 111122110 0 001222211 11235567899
Q ss_pred CcEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCC-Cch--------hHHHHHHHH--Hh
Q 018618 110 MDLVIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPV-NST--------VPIAAEVFK--KA 175 (353)
Q Consensus 110 ADiVIi~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv-~~~--------t~~~~~~~~--~~ 175 (353)
+|.|+.+++.....+. ....+...|+....++.+.+.+. +.. .+|.+|... ... ...+.+-.+ ..
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~-r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVR-KCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 9999998875422221 12344567899999999998875 233 334333311 000 000000000 00
Q ss_pred CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618 176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h 217 (353)
.-.++.-.+|.+.+...++-..+++..|++..-++ +.|+|..
T Consensus 208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 00111223566666666666666777677655553 5678864
No 126
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.57 E-value=0.00076 Score=65.14 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=62.1
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC------C--CCCeEEEEeCCCchhhhhCCCc
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM------D--TGAVVRGFLGQPQLENALTGMD 111 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~------~--~~~~v~~~~~t~d~~~al~~AD 111 (353)
..|||+|||+ |.+|+.++..|+..|+ +|.++|+++.......-.+. . ....+.. +++++++++++|
T Consensus 3 ~~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~---~~~~~e~~~~aD 76 (328)
T PRK14618 3 HGMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAAALAAERENREYLPGVALPAELYP---TADPEEALAGAD 76 (328)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE---eCCHHHHHcCCC
Confidence 3689999999 9999999999999888 89999996522221111110 0 0011332 346677889999
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
+||++.... .+.++++.+ .|+.+++.++|...
T Consensus 77 ~Vi~~v~~~----------------~~~~v~~~l---~~~~~vi~~~~Gi~ 108 (328)
T PRK14618 77 FAVVAVPSK----------------ALRETLAGL---PRALGYVSCAKGLA 108 (328)
T ss_pred EEEEECchH----------------HHHHHHHhc---CcCCEEEEEeeccc
Confidence 999984211 023333332 36667777888643
No 127
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.56 E-value=0.00057 Score=66.51 Aligned_cols=99 Identities=18% Similarity=0.181 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC----CCCC-------eEEEEeCCCchhhhhC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DTGA-------VVRGFLGQPQLENALT 108 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~----~~~~-------~v~~~~~t~d~~~al~ 108 (353)
.+|||+|+|+ |.+|+.++..|...+ +++++..++. .+.++... ...+ .+.. ++|+.++++
T Consensus 6 ~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~--~~~~i~~~~~~~~~l~~~~~l~~~i~~---t~d~~~a~~ 76 (341)
T PRK12439 6 REPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAE--TADDINDNHRNSRYLGNDVVLSDTLRA---TTDFAEAAN 76 (341)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHH--HHHHHHhcCCCcccCCCCcccCCCeEE---ECCHHHHHh
Confidence 4589999999 999999999999887 3567776542 22222211 1111 2332 457778899
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618 109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS 163 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~ 163 (353)
++|+||++.. ...++++++.+..+- ++..++.++|-.+.
T Consensus 77 ~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~ 116 (341)
T PRK12439 77 CADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQ 116 (341)
T ss_pred cCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcC
Confidence 9999999842 223566666666654 66778888887664
No 128
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.55 E-value=0.0006 Score=66.36 Aligned_cols=96 Identities=22% Similarity=0.375 Sum_probs=63.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCC------CCcEEEEEeCCC---cHHHHHHHh--cCC--CC------CeEEEEeCCCch
Q 018618 43 KVAILGAAGGIGQPLAMLMKINP------LVSVLHLYDVVN---TPGVTADIS--HMD--TG------AVVRGFLGQPQL 103 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~------~~~el~L~D~~~---~~~~~~dl~--~~~--~~------~~v~~~~~t~d~ 103 (353)
||+|||+ |..|.++|..|..++ ...+|.|+.+++ -......++ |.. +. ..++. ++|+
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~a---t~dl 76 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVA---VPDL 76 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEE---ECCH
Confidence 7999999 999999999999877 123999998743 122233332 221 11 12343 4688
Q ss_pred hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618 104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 158 (353)
Q Consensus 104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 158 (353)
++++++||+||++. | ...++++++.+..+- ++..++.+|
T Consensus 77 ~eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t 116 (342)
T TIGR03376 77 VEAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HHHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 89999999999974 2 334666677776654 445566555
No 129
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.54 E-value=0.00017 Score=67.29 Aligned_cols=114 Identities=17% Similarity=0.091 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
..++||+|+||+||||||++-.|+..|+ +|..+|..- .+....++|....+..+... ..-...-++.+|-|+.+|.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~f-tg~k~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLAa 100 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYF-TGRKENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLAA 100 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEeccc-ccchhhcchhccCcceeEEE-eechhHHHHHhhhhhhhcc
Confidence 4558999999999999999999999997 999999754 22333344443333333221 1222456899999999876
Q ss_pred CCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 119 VPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 119 ~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
....++ .+-.+.+.-|.-....+....++.+ +.++.+|
T Consensus 101 pasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aS 140 (350)
T KOG1429|consen 101 PASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLAS 140 (350)
T ss_pred CCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEee
Confidence 432222 2223333444444445555555443 5555554
No 130
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0014 Score=68.82 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=69.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHh--CCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----------CchhhhhCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKI--NPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----------PQLENALTG 109 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~--~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----------~d~~~al~~ 109 (353)
|||.|+||+|++|++++..|+. .+. +|++++++.......++........++.+.+. .++ +.+++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~l~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA--TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADI-AELGD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC--EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHH-HHhcC
Confidence 6899999999999999999984 455 89999986522222222111000122222110 122 23489
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 018618 110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156 (353)
Q Consensus 110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv 156 (353)
+|+||++++... ...+..+....|+.....+++.+.+.....++.+
T Consensus 78 ~D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~ 123 (657)
T PRK07201 78 IDHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERLQAATFHHV 123 (657)
T ss_pred CCEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEE
Confidence 999999987542 2234456678899999999999887643433333
No 131
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.50 E-value=0.00065 Score=65.23 Aligned_cols=120 Identities=16% Similarity=0.225 Sum_probs=70.3
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHH---HHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~---dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
.+|||+|+|+ |.+|..+|..|...|+ ++.+++++....... .+........+......++. ++...+|+||++
T Consensus 4 ~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vila 79 (313)
T PRK06249 4 ETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQAYRSA-EDMPPCDWVLVG 79 (313)
T ss_pred cCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceEEcch-hhcCCCCEEEEE
Confidence 4589999999 9999999999999887 999999865221111 00000000011100011232 356889999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
..... ..+.++.+... .|++.++...|=.+..-. +.+. +|++++++-
T Consensus 80 vK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e~-----l~~~--~~~~~v~~g 127 (313)
T PRK06249 80 LKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEEQ-----LREI--LPAEHLLGG 127 (313)
T ss_pred ecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHHH-----HHHH--CCCCcEEEE
Confidence 53221 12334444443 378888888887765432 2232 677787754
No 132
>PLN02253 xanthoxin dehydrogenase
Probab=97.49 E-value=0.0023 Score=59.80 Aligned_cols=147 Identities=17% Similarity=0.190 Sum_probs=82.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------ 108 (353)
.+++.|+||+|.+|.+++..|+..|. +|+++|.++ ......++.. ...+..+. .-+| .+++++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 34799999999999999999999887 899999865 2222223321 11222211 1122 223333
Q ss_pred -CCcEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618 109 -GMDLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAG 176 (353)
Q Consensus 109 -~ADiVIi~ag~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~ 176 (353)
..|++|+.+|..... ..+ ....+..|+.....+.+.+... ...+.+++++......
T Consensus 93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------ 160 (280)
T PLN02253 93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI------------ 160 (280)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc------------
Confidence 689999999864321 112 2344566766555544444322 1345666665432211
Q ss_pred CCCCCceEeechhhHHHHHHHHHHHhCC
Q 018618 177 TYDPKKLLGVTMLDVVRANTFVAEVLGL 204 (353)
Q Consensus 177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v 204 (353)
+.+..-.+|.+......+-+.+++.++-
T Consensus 161 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~ 188 (280)
T PLN02253 161 GGLGPHAYTGSKHAVLGLTRSVAAELGK 188 (280)
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHHhhh
Confidence 1222235666655555677778887753
No 133
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.47 E-value=0.00099 Score=66.60 Aligned_cols=109 Identities=21% Similarity=0.213 Sum_probs=67.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC----------------CCeEEEEeCCCchh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT----------------GAVVRGFLGQPQLE 104 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~----------------~~~v~~~~~t~d~~ 104 (353)
.+||+|||. |+||..+|..|++.|+ +|+.+|+++.+-.. +..... ...+.. +++
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~~--l~~g~~~~~e~~l~~~l~~~~~~g~l~~---~~~-- 72 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVDT--INRGEIHIVEPDLDMVVKTAVEGGYLRA---TTT-- 72 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHHH--HHCCCCCcCCCCHHHHHHHHhhcCceee---ecc--
Confidence 469999999 9999999999999997 99999997622121 221110 011221 222
Q ss_pred hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHH
Q 018618 105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPI 167 (353)
Q Consensus 105 ~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~ 167 (353)
+++||+||++...|..... ..++..+.+.++.+..+. ++.+||+- |.|....-.+
T Consensus 73 --~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~ 129 (415)
T PRK11064 73 --PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQM 129 (415)
T ss_pred --cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHH
Confidence 3589999999877643221 122334555556666655 45555554 4576655443
No 134
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.46 E-value=0.0024 Score=58.64 Aligned_cols=115 Identities=16% Similarity=0.216 Sum_probs=67.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch---hhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL---ENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~al------- 107 (353)
.+++.|+||+|.+|++++..|++.|. +|++++.++ ......++.+.. ..+..+.. -+|. ++++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKAG--GKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhcC--ceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34899999999999999999999998 899999876 233333444322 22222211 1221 1222
Q ss_pred CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g---~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 159 (353)
.+.|+||.++|..... . ....+.+..|+.. .+.+.+.+.+..+.+.++++|.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss 144 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGS 144 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcc
Confidence 3489999998864211 1 1123345566666 5566666633334455555543
No 135
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.45 E-value=0.00058 Score=63.94 Aligned_cols=95 Identities=23% Similarity=0.305 Sum_probs=67.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC--cEEEEcCCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM--DLVIIPAGVP 120 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A--DiVIi~ag~~ 120 (353)
||.|+||+|++|++++..|.+.|+ +|++++... .|+.+ ..++.++++++ |+||.+++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence 689999999999999999998887 899888641 12211 12345666665 9999998754
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 121 RKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 121 ~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
.... .........|+.....+++.+.+... .++++|
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S 99 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHIS 99 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence 3221 23455678899999999999887643 444444
No 136
>PLN02240 UDP-glucose 4-epimerase
Probab=97.44 E-value=0.0024 Score=61.68 Aligned_cols=115 Identities=18% Similarity=0.164 Sum_probs=70.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC--CCCeEEEEe----CCCchhhhhC--CC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFL----GQPQLENALT--GM 110 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~--~~~~v~~~~----~t~d~~~al~--~A 110 (353)
.+||.|+||+|++|++++..|++.|. +|+++|... .......+.+.. ....+..+. ...+++++++ ++
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 35899999999999999999998887 899998643 111111111110 011222211 1123334444 68
Q ss_pred cEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 111 DLVIIPAGVPRK-PG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 111 DiVIi~ag~~~~-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
|+||++++.... .. ......+..|+.....+++.+++..... ++.+|
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S 131 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKK-LVFSS 131 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence 999999875421 11 2345678899999999999887764333 44444
No 137
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0033 Score=57.99 Aligned_cols=116 Identities=22% Similarity=0.274 Sum_probs=66.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE-EeCCCchhhhh--------CCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENAL--------TGM 110 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~-~~~t~d~~~al--------~~A 110 (353)
+++.|+||+|.+|..++..|++.|. +|+++|.+.. .....++..... ..+.. +....+.++++ ...
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGAGNA-WTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCCce-EEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4699999999999999999999987 8999998652 212222221110 01111 11112222333 345
Q ss_pred cEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHh---hCCCcEEEEecCC
Q 018618 111 DLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK---CCPNATVNLISNP 160 (353)
Q Consensus 111 DiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tNP 160 (353)
|+||.++|...... .+ ....+..|+.....+.+.+.. ..+.+.+++++..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~ 137 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSA 137 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 99999998653211 12 234566777766666555533 2344556655543
No 138
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.42 E-value=0.0019 Score=60.86 Aligned_cols=165 Identities=15% Similarity=0.119 Sum_probs=101.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEE-eCCCchhhhhC--CCcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF-LGQPQLENALT--GMDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~-~~t~d~~~al~--~ADiVIi 115 (353)
|++.|+|++||+|+++...+..+..-.+|+.+|.-.- .....++.+......+++- +......+.++ +.|+|+.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5899999999999999988877655457899997652 2223445543222223321 11122334555 6999999
Q ss_pred cCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-cEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHH
Q 018618 116 PAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV 192 (353)
Q Consensus 116 ~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~ 192 (353)
.|.-.. +.=....+++.-|+-....+.+.++++... -.+-+.|.-|.---..-...+...+.+.|+-.+..+.-.+.
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 875332 111235678899999999999999999864 34555565543110000000123455777777776544455
Q ss_pred HHHHHHHHHhCCCC
Q 018618 193 RANTFVAEVLGLDP 206 (353)
Q Consensus 193 R~~~~lA~~l~v~~ 206 (353)
-+-+...+.+|++.
T Consensus 161 ~lVray~~TYglp~ 174 (340)
T COG1088 161 LLVRAYVRTYGLPA 174 (340)
T ss_pred HHHHHHHHHcCCce
Confidence 56677778888864
No 139
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.41 E-value=0.0011 Score=62.56 Aligned_cols=64 Identities=23% Similarity=0.269 Sum_probs=45.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||+|||. |.+|..++..|...|+ +|.++|.++ ....+.+. . .+.. .+++. +++++||+||++.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~~~~a~~~---g---~~~~--~~~~~-~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRRESTCERAIER---G---LVDE--ASTDL-SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHC---C---Cccc--ccCCH-hHhcCCCEEEEcC
Confidence 58999998 9999999999998887 899999875 21122111 1 1111 12344 5689999999985
No 140
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.41 E-value=0.0011 Score=62.68 Aligned_cols=109 Identities=11% Similarity=0.119 Sum_probs=66.9
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhh----hCCCcEEEEcCCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA----LTGMDLVIIPAGV 119 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~a----l~~ADiVIi~ag~ 119 (353)
|.|+||+|++|++++..|...|.. +|+++|..........+........+.. ...++.. +.++|+||++|+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNLRDGHKFLNLADLVIADYIDK---EDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc-eEEEEecCCCchhhhhhhheeeeccCcc---hhHHHHHHhhccCCCCEEEECccc
Confidence 579999999999999999988842 6888886542111111111000011111 1122222 2489999999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
......+.......|+.....+++.+.+... .++.+|
T Consensus 77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~S 113 (314)
T TIGR02197 77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYAS 113 (314)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEc
Confidence 4322234455678899999999999987653 344444
No 141
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.40 E-value=0.00051 Score=57.28 Aligned_cols=102 Identities=21% Similarity=0.229 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
..+||+|||+ |.||.+++..|...|+ +|.-+-.+. ...+..+.+.- +.... .++++.+++||+++++..
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~--~~~~~----~~~~~~~~~aDlv~iavp- 77 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFI--GAGAI----LDLEEILRDADLVFIAVP- 77 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC----TT---------TTGGGCC-SEEEE-S--
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-ccccccccccc--ccccc----cccccccccCCEEEEEec-
Confidence 3579999999 9999999999999997 666655432 22223333321 11121 234577899999999852
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhh--CCCcEEEEec---CCCCchhHH
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLIS---NPVNSTVPI 167 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~t---NPv~~~t~~ 167 (353)
+ | .+.++++++..+ ...+.+++-| -+++++.++
T Consensus 78 ----D----d-------aI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~ 115 (127)
T PF10727_consen 78 ----D----D-------AIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPA 115 (127)
T ss_dssp ----C----C-------HHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHH
T ss_pred ----h----H-------HHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhH
Confidence 1 1 267888888877 3233344433 556777653
No 142
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.38 E-value=0.0075 Score=55.48 Aligned_cols=116 Identities=13% Similarity=0.166 Sum_probs=66.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG 109 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~ 109 (353)
+|.|+||+|.+|.+++..|++.|. +|+++|.+. ......++........+..+. .-+| .+.++ ..
T Consensus 4 ~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 799999999999999999999987 899999865 222222333211111222211 1122 12222 46
Q ss_pred CcEEEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCC
Q 018618 110 MDLVIIPAGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISNP 160 (353)
Q Consensus 110 ADiVIi~ag~~~~~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP 160 (353)
.|+||.++|.+... ..+.. ..+..|+.. .+.+.+.+.+..+++.++.+|..
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~ 142 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK 142 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence 79999999865321 12222 234556554 44555555544445566666653
No 143
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0054 Score=56.40 Aligned_cols=100 Identities=21% Similarity=0.368 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA------- 106 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a------- 106 (353)
+.+++.|+||+|.+|+.++..|++.|. +|++++.++. .....++... .+..+. .-+| +.++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSEAALAATAARLPGA----KVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC----ceEEEEccCCCHHHHHHHHHHHHHH
Confidence 346999999999999999999999988 8999998652 2111222211 111111 1112 1122
Q ss_pred hCCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHH
Q 018618 107 LTGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVRTLCEGI 145 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~g----~~r---~~~~~~N~~i~~~i~~~i 145 (353)
+.+.|+||..+|.....+ .+. ...+..|......+.+.+
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 129 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAA 129 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 247899999988642221 122 234456665555555544
No 144
>PRK08643 acetoin reductase; Validated
Probab=97.35 E-value=0.011 Score=54.24 Aligned_cols=155 Identities=18% Similarity=0.171 Sum_probs=82.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~ 108 (353)
+++.|+||+|.+|.+++..|++.|. +|+++|.+. ......++.+.. ..+..+. .-+|. .++ +.
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDG--GKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3789999999999999999999887 899999876 222333343321 1222111 11121 122 24
Q ss_pred CCcEEEEcCCCCC-CCC--CC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618 109 GMDLVIIPAGVPR-KPG--MT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY 178 (353)
Q Consensus 109 ~ADiVIi~ag~~~-~~g--~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~ 178 (353)
+.|+||+++|... .+- .+ ....+..|+.... .+.+.+.+..+++.++++|...... +.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~ 146 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV------------GN 146 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc------------CC
Confidence 6899999988642 111 11 1234455665443 3344444334456777666533211 12
Q ss_pred CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
|..-.++.+......+-+.+++.+ .+..+++..+
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i 180 (256)
T PRK08643 147 PELAVYSSTKFAVRGLTQTAARDL--ASEGITVNAY 180 (256)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHh--cccCcEEEEE
Confidence 222334444333334555666654 3445554444
No 145
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.012 Score=53.61 Aligned_cols=115 Identities=19% Similarity=0.070 Sum_probs=67.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC----CCchhhhh----CCCc
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENAL----TGMD 111 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al----~~AD 111 (353)
++|.|+||+|.+|..++..|++.|. +|+++|+++ ......++.... ...+..+.. ..+.++.+ +..|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 5899999999999999999999887 899999876 222233333211 122322211 11222222 2459
Q ss_pred EEEEcCCCCC---CCCCCHH---HHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618 112 LVIIPAGVPR---KPGMTRD---DLFNINAGIVRTLCEGIAKCC---PNATVNLISN 159 (353)
Q Consensus 112 iVIi~ag~~~---~~g~~r~---~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 159 (353)
+||+.+|... ....+.. +.+..|+.....+.+.+..+. ..+.++++|-
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 135 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS 135 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 9999887532 1122332 345677776666666655432 3455666654
No 146
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.34 E-value=0.0022 Score=63.13 Aligned_cols=75 Identities=23% Similarity=0.240 Sum_probs=50.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
++||.|||| |.||+.+|..|++.+. .+|.+.|+... ...+.+..+.... ..+... ....+.+++++.|+||.++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDAA-DVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEeccc-ChHHHHHHHhcCCEEEEeCC
Confidence 479999999 9999999999999885 59999998752 2222222211111 122221 12345688899999999864
No 147
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.33 E-value=0.0087 Score=56.06 Aligned_cols=118 Identities=19% Similarity=0.200 Sum_probs=75.5
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe----CCCchhh------
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLEN------ 105 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~----~t~d~~~------ 105 (353)
....+.+.|+||++-+|..+|..|+.+|+ +|+|+.+++ +...+.++++.- ...+..+. .+++.+.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~ 79 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELK 79 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHH
Confidence 34556899999999999999999999999 999999987 666777777643 12222211 1122221
Q ss_pred -hhCCCcEEEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecC
Q 018618 106 -ALTGMDLVIIPAGVPRKP------GMTRDDLFNINAGIVRTLCE----GIAKCCPNATVNLISN 159 (353)
Q Consensus 106 -al~~ADiVIi~ag~~~~~------g~~r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tN 159 (353)
..-..|+.|..||..... -.+-.+++.-|+-.+..+.. .+.+.. .+.||+++.
T Consensus 80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S 143 (265)
T COG0300 80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGS 143 (265)
T ss_pred hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEec
Confidence 112689999999865322 12234667777665555544 444432 455666653
No 148
>PRK12320 hypothetical protein; Provisional
Probab=97.31 E-value=0.00078 Score=71.20 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=66.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 121 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~ 121 (353)
|||.|+||+|++|++++..|...|+ +|+.+|..... ..+... ..+..-.....+.+++.++|+||++++...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~v-e~v~~Dl~d~~l~~al~~~D~VIHLAa~~~ 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPRV-DYVCASLRNPVLQELAGEADAVIHLAPVDT 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCCc-eEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence 6999999999999999999999887 99999975411 111110 111110001124566789999999986431
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
.. ....|+....++++.+++.+. .+|.+|
T Consensus 73 --~~----~~~vNv~Gt~nLleAA~~~Gv--RiV~~S 101 (699)
T PRK12320 73 --SA----PGGVGITGLAHVANAAARAGA--RLLFVS 101 (699)
T ss_pred --cc----hhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence 11 124688888999998887654 455554
No 149
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.30 E-value=0.001 Score=60.07 Aligned_cols=167 Identities=17% Similarity=0.155 Sum_probs=95.0
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC--cEEEEcCCCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGM--DLVIIPAGVP 120 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A--DiVIi~ag~~ 120 (353)
|.|+||+|++|++++..|...+. +++-+.... ............. .... .....++++++++. |.||.+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~-~~~d-l~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLNVEF-VIGD-LTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTTEEE-EESE-TTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccceEEE-EEee-ccccccccccccccCceEEEEeeccc
Confidence 78999999999999999999998 655555444 2222221111000 0011 01123455667777 9999998765
Q ss_pred C--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHH
Q 018618 121 R--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 197 (353)
Q Consensus 121 ~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~ 197 (353)
. .......+....|+...+.+.+.+.+... ..++..+.. +..... ...+.....+.+...+|.+.....++-..
T Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~sS~~~y~~~~--~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~ 153 (236)
T PF01370_consen 77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLSSASVYGDPD--GEPIDEDSPINPLSPYGASKRAAEELLRD 153 (236)
T ss_dssp SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEGGGGTSSS--SSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccc-cccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence 2 11134567788999999999999998877 344444331 110000 00000000111223356655555566666
Q ss_pred HHHHhCCCCCCCc-ceEEeec
Q 018618 198 VAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 198 lA~~l~v~~~~v~-~~viG~h 217 (353)
++++.+++...++ ..++|.+
T Consensus 154 ~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 154 YAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHTSEEEEEEESEEESTT
T ss_pred ccccccccccccccccccccc
Confidence 7777777766664 4566655
No 150
>PRK05717 oxidoreductase; Validated
Probab=97.30 E-value=0.0021 Score=59.22 Aligned_cols=145 Identities=13% Similarity=0.117 Sum_probs=82.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LTGM 110 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~~A 110 (353)
++|.|+||+|.+|++++..|+..|. +|+++|.+....... ..+.. ..+..+. .-+|. +++ +...
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKV-AKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHH-HHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999887 899999765221111 11111 1111111 11121 111 2347
Q ss_pred cEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618 111 DLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180 (353)
Q Consensus 111 DiVIi~ag~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~ 180 (353)
|++|..+|..... ..+ ....+..|+.....+.+.+..+- ..+.+|++|...... +.+.
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~------------~~~~ 153 (255)
T PRK05717 86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ------------SEPD 153 (255)
T ss_pred CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC------------CCCC
Confidence 9999999864321 112 23456778777777777775432 345666665432211 1222
Q ss_pred CceEeechhhHHHHHHHHHHHhC
Q 018618 181 KKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 181 ~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
.-.+|.+......+-+.+++.++
T Consensus 154 ~~~Y~~sKaa~~~~~~~la~~~~ 176 (255)
T PRK05717 154 TEAYAASKGGLLALTHALAISLG 176 (255)
T ss_pred CcchHHHHHHHHHHHHHHHHHhc
Confidence 23466654444456677788775
No 151
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0077 Score=57.09 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=59.4
Q ss_pred CcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe
Q 018618 21 PNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL 98 (353)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~ 98 (353)
|-.|...++.+..+...-...++|.|+||+|.+|..++..|++.|. +|+++|++. +.....++.... ..+..+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~~l~~~~~~l~~~~--~~~~~~~ 95 (293)
T PRK05866 20 PPISPQLLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGA--TVVAVARREDLLDAVADRITRAG--GDAMAVP 95 (293)
T ss_pred CCCCchhhcCCCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEE
Confidence 4456666765554443233346899999999999999999999887 999999876 222333332211 1122111
Q ss_pred C----CCchhhhh-------CCCcEEEEcCCCC
Q 018618 99 G----QPQLENAL-------TGMDLVIIPAGVP 120 (353)
Q Consensus 99 ~----t~d~~~al-------~~ADiVIi~ag~~ 120 (353)
. ..+.++++ .+.|++|..+|..
T Consensus 96 ~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~ 128 (293)
T PRK05866 96 CDLSDLDAVDALVADVEKRIGGVDILINNAGRS 128 (293)
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1 11222333 3789999998854
No 152
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.30 E-value=0.0099 Score=54.14 Aligned_cols=114 Identities=18% Similarity=0.258 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeC----CCchhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG----QPQLENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~----t~d~~~al------- 107 (353)
.++|.|+||+|.+|..++..|++.|. +|++++++.. .....++.+ ...+..+.. ..+...++
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999987 8999998762 222233332 112222211 11222222
Q ss_pred CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 159 (353)
...|+||.++|..... ..+ ..+.+..|+.....+.+.+..+. ....++++|.
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 141 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAS 141 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 3579999998863211 112 22345566655444444444332 2344555443
No 153
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.29 E-value=0.0041 Score=57.22 Aligned_cols=145 Identities=17% Similarity=0.165 Sum_probs=81.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCc
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMD 111 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~AD 111 (353)
+++.|+||+|.+|.+++..|++.|. +|+++|.+.. .....++.... ..+.. .....+.+++ +...|
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA--IAVSLDVTRQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce--EEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999999998 8999998762 22222222110 00111 1111122222 24689
Q ss_pred EEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618 112 LVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 181 (353)
Q Consensus 112 iVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~ 181 (353)
++|+.+|.... + ..+ ....+..|+.....+.+.+..+ .+.+.++++|..... .+.++.
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~ 150 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR------------RGEALV 150 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC------------CCCCCC
Confidence 99999875421 1 112 3344667777666666665433 234566666553211 123334
Q ss_pred ceEeechhhHHHHHHHHHHHh
Q 018618 182 KLLGVTMLDVVRANTFVAEVL 202 (353)
Q Consensus 182 kviG~t~ld~~R~~~~lA~~l 202 (353)
-.++.+......+.+.+++.+
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~ 171 (257)
T PRK07067 151 SHYCATKAAVISYTQSAALAL 171 (257)
T ss_pred chhhhhHHHHHHHHHHHHHHh
Confidence 445554443344556666665
No 154
>PRK05865 hypothetical protein; Provisional
Probab=97.29 E-value=0.0016 Score=70.22 Aligned_cols=104 Identities=17% Similarity=0.164 Sum_probs=70.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
|||.|+||+|++|++++..|...|+ +|+.+|.+.... +. ... ..+.. .....++.++++++|+||++++..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~-~~v-~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WP-SSA-DFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----cc-cCc-eEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 6899999999999999999999888 899999764110 11 010 11111 111235567789999999998643
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 161 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 161 (353)
.. ....|+....++++.+++.+.. .++++|.+.
T Consensus 73 ~~-------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~ 105 (854)
T PRK05865 73 GR-------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH 105 (854)
T ss_pred cc-------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH
Confidence 21 3467888888999988876533 556666554
No 155
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.28 E-value=0.0017 Score=62.96 Aligned_cols=97 Identities=23% Similarity=0.272 Sum_probs=64.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..++|.|+||+|++|+.++..|....-..+|++++++. +.....++.+.. + .++++++.++|+||.++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~----i------~~l~~~l~~aDiVv~~t 223 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK----I------LSLEEALPEADIVVWVA 223 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc----H------HhHHHHHccCCEEEECC
Confidence 34689999999999999999997542245899999865 222222222111 1 24678999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCch
Q 018618 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST 164 (353)
Q Consensus 118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~ 164 (353)
+.+...-.+..++ .+..+++=++.|=|+-
T Consensus 224 s~~~~~~I~~~~l------------------~~~~~viDiAvPRDVd 252 (340)
T PRK14982 224 SMPKGVEIDPETL------------------KKPCLMIDGGYPKNLD 252 (340)
T ss_pred cCCcCCcCCHHHh------------------CCCeEEEEecCCCCCC
Confidence 8764211222111 2567777788887765
No 156
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.27 E-value=0.0036 Score=57.57 Aligned_cols=116 Identities=16% Similarity=0.224 Sum_probs=69.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
.++|.|+||+|.+|..++..|+..|. +|+++|.++ ......++... ...+..+. .-+| .++++
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 35899999999999999999999888 899999876 22222333322 11222211 1112 22222
Q ss_pred CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCC
Q 018618 108 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP 160 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP 160 (353)
...|+||..+|.... + ..+ ..+.+..|+.....+.+.+.++. ..+.++++|..
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 147 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASV 147 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc
Confidence 357999999886421 1 111 23455677776666666665542 34566666643
No 157
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.27 E-value=0.0027 Score=62.93 Aligned_cols=113 Identities=19% Similarity=0.174 Sum_probs=68.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--H--HHHHHhcCCCCCe-EEE-EeCCCchhhhhC----C
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G--VTADISHMDTGAV-VRG-FLGQPQLENALT----G 109 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~--~~~dl~~~~~~~~-v~~-~~~t~d~~~al~----~ 109 (353)
..+||.|+||+|++|++++..|+..|+ +|++++++... . ...++........ +.. .....++.++++ +
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 346999999999999999999999887 89999986511 0 1111111100111 111 111233455566 5
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
+|+||.+++.+.. + ..+.+..|.....++.+.+++.+-.- ++++|
T Consensus 137 ~D~Vi~~aa~~~~-~--~~~~~~vn~~~~~~ll~aa~~~gv~r-~V~iS 181 (390)
T PLN02657 137 VDVVVSCLASRTG-G--VKDSWKIDYQATKNSLDAGREVGAKH-FVLLS 181 (390)
T ss_pred CcEEEECCccCCC-C--CccchhhHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence 9999998764321 1 12334667888888888888765443 34443
No 158
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.27 E-value=0.002 Score=62.07 Aligned_cols=111 Identities=15% Similarity=0.126 Sum_probs=72.5
Q ss_pred cHHHHHHHHHhCCCCcEEEEEeCCCc--H--------HH--HHH----Hh-cCC--------CCCeEEEEeCCCchhhhh
Q 018618 53 IGQPLAMLMKINPLVSVLHLYDVVNT--P--------GV--TAD----IS-HMD--------TGAVVRGFLGQPQLENAL 107 (353)
Q Consensus 53 vG~~la~~l~~~~~~~el~L~D~~~~--~--------~~--~~d----l~-~~~--------~~~~v~~~~~t~d~~~al 107 (353)
+|+.+|..++..|+ +|+|+|.++. . +. ..+ +. +.. ...+++.. .+.|.++++
T Consensus 1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~~a~ 77 (314)
T PRK08269 1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVV-ARDGAADAL 77 (314)
T ss_pred CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEee-cCcchHHHh
Confidence 57889999999998 9999999871 1 11 001 11 110 01245543 123466889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
++||+||.+. .++.++.+++...+.+.+ |++++ .||.+.....-++ .... .|+|++|+
T Consensus 78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~la----~~~~-~p~r~~g~ 136 (314)
T PRK08269 78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDLQ----RHVA-HPERFLNA 136 (314)
T ss_pred ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHHH----hhcC-CcccEEEE
Confidence 9999999985 677888999999999998 56654 8888776653322 2222 35678776
Q ss_pred c
Q 018618 187 T 187 (353)
Q Consensus 187 t 187 (353)
.
T Consensus 137 H 137 (314)
T PRK08269 137 H 137 (314)
T ss_pred e
Confidence 4
No 159
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.27 E-value=0.0019 Score=61.74 Aligned_cols=67 Identities=25% Similarity=0.250 Sum_probs=47.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+||+|||+ |.+|..++..|...|...+|.++|+++. ...+ .... ..... ..+.++++++||+||++.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a---~~~g--~~~~~---~~~~~~~~~~aDvViiav 74 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARA---RELG--LGDRV---TTSAAEAVKGADLVILCV 74 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH---HhCC--CCcee---cCCHHHHhcCCCEEEECC
Confidence 58999998 9999999999998886558999998752 1111 1111 11111 134567789999999985
No 160
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=97.25 E-value=0.0016 Score=63.53 Aligned_cols=110 Identities=21% Similarity=0.238 Sum_probs=73.3
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEE----eCCCchhhhhCCCcEEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF----LGQPQLENALTGMDLVI 114 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~~ADiVI 114 (353)
++.++.|+||+|++|.+++..|.+.+...+|.++|.... ...-.+.... ....++.. ....+...|+.++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 345899999999999999999999886669999998762 1111111110 01222221 1224567899999 666
Q ss_pred EcCCCC-CCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCC
Q 018618 115 IPAGVP-RKPGM-TRDDLFNINAGIVRTLCEGIAKCCPN 151 (353)
Q Consensus 115 i~ag~~-~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~ 151 (353)
+.+..+ ....+ .+......|++..+.+.+.+.+.+-+
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~ 119 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK 119 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCC
Confidence 654432 22233 36667789999999999999988643
No 161
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0077 Score=54.48 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=65.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~ 108 (353)
++|.|+||+|.+|++++..|+..|. +|+++++++ ......++... ..+..+.. -+| +.+++ .
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999998887 899999876 22223334321 12222111 112 22222 3
Q ss_pred CCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCC
Q 018618 109 GMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC--CPNATVNLISNP 160 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r~---~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP 160 (353)
+.|+||..+|..... ..+.. +.+..|+.....+.+.+.+. ...+.++++|..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 789999998754221 12222 33555666555555554332 133556666543
No 162
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.23 E-value=0.0029 Score=63.70 Aligned_cols=66 Identities=24% Similarity=0.374 Sum_probs=47.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||+||||+|.+|..++..|...|+ +|.++|.++... .++.... . +.. +++..+++.+||+||++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~--~~~a~~~-g--v~~---~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKG--KEVAKEL-G--VEY---ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHH--HHHHHHc-C--Cee---ccCHHHHhccCCEEEEec
Confidence 6899998669999999999998887 899999875221 1111110 1 121 246678899999999985
No 163
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.22 E-value=0.0018 Score=60.51 Aligned_cols=95 Identities=15% Similarity=0.270 Sum_probs=59.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEE-eCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~-D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
|||++||. |.+|..++..|...++ ..+|+++ |+++.. ...+... . +... .+..+++++||+||++.
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~--g--~~~~---~~~~e~~~~aDvVil~v- 69 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSL--G--VKTA---ASNTEVVKSSDVIILAV- 69 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHc--C--CEEe---CChHHHHhcCCEEEEEE-
Confidence 79999998 9999999999998875 4578888 765422 2223321 1 2221 34567789999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN 162 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~ 162 (353)
.| +.+.++.+.+..+. |+.++|..++...
T Consensus 70 ~~---------------~~~~~vl~~l~~~~~~~~~iIs~~~g~~ 99 (266)
T PLN02688 70 KP---------------QVVKDVLTELRPLLSKDKLLVSVAAGIT 99 (266)
T ss_pred Cc---------------HHHHHHHHHHHhhcCCCCEEEEecCCCc
Confidence 12 12344444554443 5666665555443
No 164
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.21 E-value=0.0037 Score=57.36 Aligned_cols=152 Identities=13% Similarity=0.129 Sum_probs=80.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
|+|.|+||+|.+|..++..|...|. +|+++|+++. .....++. ..+..+. .-+| .+++ +.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 73 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWR 73 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhc-----cceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999998887 8999998752 11111111 1111111 0112 2222 24
Q ss_pred CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618 109 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVFKKAGTY 178 (353)
Q Consensus 109 ~ADiVIi~ag~~~--~~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv~~~t~~~~~~~~~~~~~ 178 (353)
+.|+||..+|... .+ ..+. .+.+..|+.....+.+.+..+. ..+.++++|...... ++
T Consensus 74 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~ 141 (248)
T PRK10538 74 NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW------------PY 141 (248)
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC------------CC
Confidence 7999999988532 11 1222 2345666666444444443322 234566665432211 12
Q ss_pred CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
+....++.+......+-..+++.++ +..|++.++
T Consensus 142 ~~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~v~~v 175 (248)
T PRK10538 142 AGGNVYGATKAFVRQFSLNLRTDLH--GTAVRVTDI 175 (248)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhc--CCCcEEEEE
Confidence 3333455533222334455555553 444554444
No 165
>PRK07680 late competence protein ComER; Validated
Probab=97.21 E-value=0.0021 Score=60.50 Aligned_cols=97 Identities=16% Similarity=0.216 Sum_probs=62.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
|||+|||+ |.+|..++..|...+. ..++.++|++... ...+.+. ...+... .+..+++.++|+||++..
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~--~~~~~~~--~~g~~~~---~~~~~~~~~aDiVilav~- 71 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAK--AYHIKER--YPGIHVA---KTIEEVISQSDLIFICVK- 71 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHH--HHHHHHH--cCCeEEE---CCHHHHHHhCCEEEEecC-
Confidence 58999998 9999999999988873 2479999987522 1222221 1123322 345677899999999851
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN 162 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~ 162 (353)
| ..+.++++.+..+- ++.+|+.+++++.
T Consensus 72 p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 72 P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 1 11344445555443 5678888888774
No 166
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0087 Score=55.72 Aligned_cols=113 Identities=12% Similarity=-0.001 Sum_probs=65.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCch---hhh-------hCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQL---ENA-------LTGM 110 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l~~A 110 (353)
++|.|+||+|++|++++..|+..|. .+++++.+... ..++.... ...+..+.. -+|. +++ +.+.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3799999999999999999999887 88888876411 11121111 112222111 1222 122 3457
Q ss_pred cEEEEcCCCCCCCC-C--C---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 111 DLVIIPAGVPRKPG-M--T---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 111 DiVIi~ag~~~~~g-~--~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
|+||+++|...... . + ....+..|+.....+.+.+..+ ...+.++++|.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS 135 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSS 135 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcC
Confidence 99999998653211 1 1 2334567877777777776332 22345555543
No 167
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0076 Score=54.76 Aligned_cols=147 Identities=14% Similarity=0.080 Sum_probs=80.6
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC----CCchhhhh------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG----QPQLENAL------ 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al------ 107 (353)
.++|.|+||+|.+|++++..|++.|. ++++++.+. ......++.... ..+..+.. ..++++++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAAG--GRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999998 777777644 122223333221 22222211 11223333
Q ss_pred -CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 108 -TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 108 -~~ADiVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
.+.|+||..+|..... . +.....+..|+.....+.+.+.+. .+.+.++++|..... .+.|
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------------~~~~ 148 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA------------LPLP 148 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc------------CCCC
Confidence 3689999998864211 1 112334567766666656555443 245566666542211 1233
Q ss_pred CCceEeechhhHHHHHHHHHHHhC
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
....++.+......+-..+++.++
T Consensus 149 ~~~~Y~~sK~a~~~~~~~~a~~~~ 172 (245)
T PRK12937 149 GYGPYAASKAAVEGLVHVLANELR 172 (245)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhh
Confidence 334455543333344555666553
No 168
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.16 E-value=0.0031 Score=59.65 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=66.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HH-HHHHHhcCCCCCeEEEEeC----CCchhhhhC--CCcEEE
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG-VTADISHMDTGAVVRGFLG----QPQLENALT--GMDLVI 114 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~-~~~dl~~~~~~~~v~~~~~----t~d~~~al~--~ADiVI 114 (353)
||.|+||+|++|+.++..|.+.+. +++++|.... .. ....+.+. ..+..+.. ..+++++++ +.|+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 689999999999999999999887 8888886431 11 11111111 01222111 123334443 689999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018618 115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATV 154 (353)
Q Consensus 115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v 154 (353)
.++|..... .....+.+..|+.....+++.+.+.....+|
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v 117 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFI 117 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEE
Confidence 998854321 1233455678999999999988876544333
No 169
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.16 E-value=0.00075 Score=55.57 Aligned_cols=72 Identities=21% Similarity=0.255 Sum_probs=46.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC--CCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
||+|+||+|++|..++..|...+.+.-+.+++.....|....-.+. .....+.... .+ .+.+.++|+|+.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecC
Confidence 7999999999999999999997777667777766523322211111 1112333321 34 36689999999985
No 170
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.014 Score=54.14 Aligned_cols=155 Identities=15% Similarity=0.147 Sum_probs=85.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh-------h
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA-------L 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a-------l 107 (353)
.+++.|+||+|.+|.+++..|+..|. +|+++|++. ......++.... ..+..+. .-++.+ ++ +
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAAG--RRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999887 999999875 222333333211 2222211 112321 12 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
...|+||..+|..... ..+ ..+.+..|......+.+.+. +..+.+.++++|.-.... +
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~ 153 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL------------A 153 (263)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC------------C
Confidence 3689999998853211 112 23345566665555555544 334456666666432211 1
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.+..-.++.+......+...++..+. + .+.+..+
T Consensus 154 ~~~~~~Y~~sK~a~~~~~~~~~~e~~--~-~i~v~~i 187 (263)
T PRK07814 154 GRGFAAYGTAKAALAHYTRLAALDLC--P-RIRVNAI 187 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHC--C-CceEEEE
Confidence 23333455543333445566666654 2 3544444
No 171
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.15 E-value=0.0028 Score=60.18 Aligned_cols=72 Identities=22% Similarity=0.295 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
+..||+|+|+ |.+|.+++..|...|. .+|.++|++. +++.+.++.+.. +..... ...+++++++++|+||.+
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~-~~I~I~nR~~~ka~~la~~l~~~~--~~~~~~-~~~~~~~~~~~aDiVIna 199 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGV-ERLTIFDVDPARAAALADELNARF--PAARAT-AGSDLAAALAAADGLVHA 199 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhC--CCeEEE-eccchHhhhCCCCEEEEC
Confidence 4468999999 9999999999998885 4799999986 445555554432 222222 123445678999999998
No 172
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.011 Score=55.30 Aligned_cols=114 Identities=13% Similarity=0.089 Sum_probs=65.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG 109 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~ 109 (353)
.++|.|+||+|.+|++++..|+..|. +|++++++.... .++.... ...+..+. .-+| ..+++ ..
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 34799999999999999999999887 899999875211 1222211 11121111 1122 22222 35
Q ss_pred CcEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 110 MDLVIIPAGVPRK---PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 110 ADiVIi~ag~~~~---~g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
.|+||.++|.... ...+. ...+..|+.....+.+.+..+ ...+.+|++|.
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS 137 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITS 137 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEec
Confidence 8999999986421 11222 234667777666666664432 12345666554
No 173
>PRK09135 pteridine reductase; Provisional
Probab=97.13 E-value=0.012 Score=53.47 Aligned_cols=147 Identities=14% Similarity=0.106 Sum_probs=82.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
++|.|+||+|++|++++..|+..|. +|+++|.+. ......++.+... ..+..+. .-+| ...++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999887 899999754 2222233432211 1122111 1122 22223
Q ss_pred CCCcEEEEcCCCCCC--CC-C---CHHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 108 TGMDLVIIPAGVPRK--PG-M---TRDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~--~g-~---~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
...|+||.++|.... .. . +..+.+..|+.....+.+.+..+- ..+.++..+. . .....++
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~ 151 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD----I--------HAERPLK 151 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC----h--------hhcCCCC
Confidence 257999999885321 11 1 234456778777777777665432 1234433322 1 0112344
Q ss_pred CCceEeechhhHHHHHHHHHHHhC
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
+...++.+......+-..+++.++
T Consensus 152 ~~~~Y~~sK~~~~~~~~~l~~~~~ 175 (249)
T PRK09135 152 GYPVYCAAKAALEMLTRSLALELA 175 (249)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHC
Confidence 445566655544555566666663
No 174
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.12 E-value=0.0036 Score=59.72 Aligned_cols=95 Identities=19% Similarity=0.229 Sum_probs=60.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 121 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~ 121 (353)
|||+|||. |.+|+.++..|...|+ +|.++|+++.. +..+..... .......++.+.++++|+|+++. |.
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g~----~~~~s~~~~~~~~~~~dvIi~~v--p~ 69 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDRT----TGVANLRELSQRLSAPRVVWVMV--PH 69 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCC----cccCCHHHHHhhcCCCCEEEEEc--Cc
Confidence 68999999 9999999999999887 99999987622 222322111 11111123334567899999974 10
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618 122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV 161 (353)
Q Consensus 122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv 161 (353)
..++++++.+.... ++.+||..||..
T Consensus 70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 02444555555554 567777777654
No 175
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.11 E-value=0.0034 Score=58.67 Aligned_cols=96 Identities=14% Similarity=0.160 Sum_probs=60.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
+|||+|||+ |.+|..++..|...+. ..++.++|+++.. ...+.+. . .+.. +++..+.+.++|+||++..
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~-~--g~~~---~~~~~~~~~~advVil~v~- 71 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEE-Y--GVRA---ATDNQEAAQEADVVVLAVK- 71 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHh-c--CCee---cCChHHHHhcCCEEEEEcC-
Confidence 479999999 9999999999988773 2478999987521 1222221 0 1121 2345667899999999852
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
...+.++++.+..+. +..|+..+|-+.
T Consensus 72 ---------------~~~~~~v~~~l~~~~-~~~vvs~~~gi~ 98 (267)
T PRK11880 72 ---------------PQVMEEVLSELKGQL-DKLVVSIAAGVT 98 (267)
T ss_pred ---------------HHHHHHHHHHHHhhc-CCEEEEecCCCC
Confidence 112445555555443 456666667553
No 176
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0054 Score=56.09 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
++|.|+||+|.+|+.++..|++.|. +|++++.++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence 4799999999999999999999987 899999865
No 177
>PRK07069 short chain dehydrogenase; Validated
Probab=97.11 E-value=0.027 Score=51.32 Aligned_cols=114 Identities=23% Similarity=0.293 Sum_probs=66.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC-C--cHHHHHHHhcCCCCCe---EEE-EeCCCchh-------hhhC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAV---VRG-FLGQPQLE-------NALT 108 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~-~--~~~~~~dl~~~~~~~~---v~~-~~~t~d~~-------~al~ 108 (353)
||.|+||+|.+|.+++..|+..|. +|+++|.+ . ......++........ +.. .....+++ +.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 588999999999999999999887 89999987 3 2223333332211111 111 11111111 2235
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 159 (353)
..|+||..+|..... ..+ ....+..|+. ..+.+.+.+++... +.++++|.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~~ss 138 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP-ASIVNISS 138 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC-cEEEEecC
Confidence 689999998864321 112 2334556766 66777777775543 45555554
No 178
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.11 E-value=0.018 Score=52.61 Aligned_cols=119 Identities=18% Similarity=0.193 Sum_probs=69.2
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE--eCC-Cc----------
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQ-PQ---------- 102 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~--~~t-~d---------- 102 (353)
..+.++|.|+|++|++|.+++..|++.|. +|+++|++. ......++.+... ..+..+ ..+ .+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~ 85 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGG-PQPAIIPLDLLTATPQNYQQLADT 85 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEecccCCCHHHHHHHHHH
Confidence 34556899999999999999999999887 999999876 2333344543221 111111 000 01
Q ss_pred hhhhhCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 103 LENALTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 103 ~~~al~~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
+.+.+...|+||..+|.... + ..+. ...+..|+.....+.+.+..+ .+...+++.|.
T Consensus 86 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss 152 (247)
T PRK08945 86 IEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS 152 (247)
T ss_pred HHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 22334568999999875321 1 2222 334566766555555544322 24455665554
No 179
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.015 Score=54.04 Aligned_cols=159 Identities=18% Similarity=0.136 Sum_probs=85.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------ 108 (353)
.++|.|+||+|.+|++++..|++.|. +|++++.+. ......++........+..+. .-+| .+..++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999998 899999865 222333333211111222211 1112 222333
Q ss_pred -CCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 109 -GMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 109 -~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
..|++|..+|.... + ..+. .+.+..|......+.+.+.++ ...+.++++|..... ..
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~------------~~ 152 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS------------NT 152 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc------------CC
Confidence 67999999875321 1 1222 234455666666665544433 234566665542210 11
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
.|..-.++.+......+-..+++.++ +..+++.++.
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~i~ 188 (276)
T PRK05875 153 HRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVNSIR 188 (276)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence 22222344444444455566666664 3456655554
No 180
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.11 E-value=0.011 Score=53.90 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=66.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al------- 107 (353)
.++|.|+||+|++|+.++..|++.|. +|+++|.+. ......++.... ..+..+.. -.| .++++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKG--GNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999988 899999876 222233343221 12222111 112 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
...|+||+.+|..... ..+. ...+..|+.....+.+.+..+ .+...+++++.
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss 139 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS 139 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence 3589999998753211 1122 234566776666655555422 23345555554
No 181
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.025 Score=52.72 Aligned_cols=114 Identities=11% Similarity=0.102 Sum_probs=63.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchhh---------hhCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLEN---------ALTG 109 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~~---------al~~ 109 (353)
+.+.|+||+|.+|++++..|+..|. +|++++.+. ......++.+......+..+. .-+|.++ .+..
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999887 899998765 222222222211112222221 1123211 1245
Q ss_pred CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEec
Q 018618 110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLIS 158 (353)
Q Consensus 110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t 158 (353)
.|+||.++|..... +.+ ..+.+..|+.....+.+. +++... +.++++|
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~vs 139 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS-GKIINIS 139 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CEEEEEC
Confidence 79999998864311 112 223455666665555555 444333 3444444
No 182
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.10 E-value=0.007 Score=55.88 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=48.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
|++.|+||+|.+|..++..|++.|. +|++.|+++ ......++.+.. .+..+. .-+| .+++ +.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYG---EVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999997 899999876 222333443211 111111 1112 2222 34
Q ss_pred CCcEEEEcCCCC
Q 018618 109 GMDLVIIPAGVP 120 (353)
Q Consensus 109 ~ADiVIi~ag~~ 120 (353)
.-|++|..+|..
T Consensus 76 ~id~li~naG~~ 87 (259)
T PRK08340 76 GIDALVWNAGNV 87 (259)
T ss_pred CCCEEEECCCCC
Confidence 689999998863
No 183
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0051 Score=55.47 Aligned_cols=115 Identities=16% Similarity=0.175 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE--EeCCCchhhhh-------CC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG--FLGQPQLENAL-------TG 109 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~--~~~t~d~~~al-------~~ 109 (353)
.++|.|+||+|.+|+.++..|++.|. +|+++|++.. .....++.... ..+.. .....++++++ ..
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADA--LRIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcC--ceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 35899999999999999999999987 8999998762 22223333221 11111 11111222222 36
Q ss_pred CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 110 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 110 ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
.|+||..+|..... ..+. .+.+..|......+++.+.+. .+...+++++.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (239)
T PRK12828 83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA 141 (239)
T ss_pred cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 89999998753211 1122 233456666555555555422 23445665554
No 184
>PRK05855 short chain dehydrogenase; Validated
Probab=97.09 E-value=0.02 Score=58.81 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh------
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA------ 106 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a------ 106 (353)
...+++.|+||+|.+|.+++..|+..|. +|++++++. ....+.++.... ..+..+. .-+|.+ +.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999988 899999876 222333343221 1222211 112221 11
Q ss_pred -hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecC
Q 018618 107 -LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 107 -l~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN 159 (353)
+...|++|..+|..... ..+. ...+..|+.... .+.+.+.+....+.|+++|.
T Consensus 389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS 452 (582)
T PRK05855 389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS 452 (582)
T ss_pred hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 23579999999875321 1222 233456654444 44445555444566666654
No 185
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.09 E-value=0.0042 Score=56.83 Aligned_cols=113 Identities=12% Similarity=0.206 Sum_probs=65.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~ 108 (353)
++|.|+||+|.+|++++..|+..|. +|+++|++. ......++.... ..+..+. .-+| ..+++ .
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999887 999999876 223333443211 1222211 1112 22222 3
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 159 (353)
+.|+||..+|..... ..+ ..+.+..|+.. .+.+.+.+++.. ...++++|.
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss 140 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMAS 140 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 689999998754221 111 22334455555 555555555443 334554443
No 186
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.013 Score=54.96 Aligned_cols=114 Identities=17% Similarity=0.120 Sum_probs=65.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~ 108 (353)
+.+.|+||+|.+|++++..|+..|. +|++.|.+. +.....++.... ..+..+.. -+| +++++ .
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAEG--FDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999998 899999876 222333343221 22222111 112 22222 3
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 159 (353)
..|++|..+|..... ..+. ...+..|+.....+.+. +.+....+.+++++.
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS 143 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS 143 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 579999999864211 1222 23345665544444444 444443455666654
No 187
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.02 Score=51.90 Aligned_cols=102 Identities=21% Similarity=0.336 Sum_probs=61.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c----HHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh---
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T----PGVTADISHMDTGAVVRGFLG-QPQ---LENAL--- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~----~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al--- 107 (353)
.++|.|+||+|.+|+.++..|++.|. ++++++... . .....++... ...+..+.. -.| .++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 46899999999999999999999888 889988643 1 1111222221 112222111 112 22222
Q ss_pred ----CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH
Q 018618 108 ----TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA 146 (353)
Q Consensus 108 ----~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~ 146 (353)
...|+||..+|..... ..+ ....+..|......+++.+.
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL 130 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4689999998864311 112 22345678887777777776
No 188
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0035 Score=57.22 Aligned_cols=114 Identities=16% Similarity=0.203 Sum_probs=66.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
+++.|+||+|++|.+++..|+..|. +|++++++. ......++.... ..+..+. .-+| .+.++
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 5899999999999999999998887 888888754 122223343211 1222211 1122 22222
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 159 (353)
.+.|+||..+|.......+....+..|......+++.+.++. ..+.++++|.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 368999998875322122223334566666667777776654 3455665553
No 189
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.08 E-value=0.015 Score=52.79 Aligned_cols=115 Identities=17% Similarity=0.231 Sum_probs=66.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~ 108 (353)
+++.|+|++|.+|.+++..|+..|. +|++++++. ......++... ...+..+.. -++ +++++ .
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNELG 83 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999887 899999876 22222334321 123332211 112 22233 3
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCC
Q 018618 109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 160 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 160 (353)
+.|+||.++|..... ..+. ...+..|+.....+.+.+..+ ...+.+++++..
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~ 144 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISST 144 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcch
Confidence 789999998864321 1222 234566666555555554432 123445555543
No 190
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.024 Score=52.93 Aligned_cols=158 Identities=15% Similarity=0.147 Sum_probs=88.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---------HHHHHHHhcCCCCCeEEEE----eCCCchhhhh-
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGF----LGQPQLENAL- 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---------~~~~~dl~~~~~~~~v~~~----~~t~d~~~al- 107 (353)
+++.|+||+|.+|.+++..|++.|. +|++++++.. ...+.++.... ..+..+ ....+.+..+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAAG--GQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHH
Confidence 4799999999999999999999987 8999997641 11222332211 122211 1111222223
Q ss_pred ------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHH
Q 018618 108 ------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVF 172 (353)
Q Consensus 108 ------~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~ 172 (353)
...|++|+++|..... ..+. ...+..|+.....+.+.+..+ ...+.++++|.+....
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------- 154 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD-------- 154 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--------
Confidence 3679999998863211 1222 233456666555555555432 2346666666433211
Q ss_pred HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
...++..-.++.+.....++-..+++.++ +..|++..+.
T Consensus 155 --~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i~ 193 (273)
T PRK08278 155 --PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNALW 193 (273)
T ss_pred --ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEe
Confidence 01123345567765555667778888775 3456555443
No 191
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.07 E-value=0.0024 Score=60.51 Aligned_cols=63 Identities=16% Similarity=0.256 Sum_probs=46.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
||+|||. |.+|+.++..|+..|+ +|.++|+++.. ...+.... . .. .++.++++++||+||++.
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g--~--~~---~~~~~~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAG--A--VT---AETARQVTEQADVIFTMV 63 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCC--C--cc---cCCHHHHHhcCCEEEEec
Confidence 6999999 9999999999999887 99999987621 12223221 1 11 235568899999999984
No 192
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.06 E-value=0.026 Score=51.45 Aligned_cols=156 Identities=15% Similarity=0.168 Sum_probs=83.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hh-------hhhCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NALTG 109 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~-------~al~~ 109 (353)
.++|.|+||+|.+|.+++..|++.|. +|++++.+........+.... ..+..+. .-++ .+ +.+..
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999998 899999765322222333221 1222111 1112 11 12246
Q ss_pred CcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHHh----hCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 110 MDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 110 ADiVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
.|++|..+|...... . ...+.+..|+.....+.+.+.. ....+.+++++.-... .+.+
T Consensus 81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~~ 148 (248)
T TIGR01832 81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF------------QGGI 148 (248)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc------------cCCC
Confidence 899999988642111 1 2234456676655555555433 2224566665542110 1112
Q ss_pred CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
..-.++.+......+.+.+++.+. +..|++.++
T Consensus 149 ~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v 181 (248)
T TIGR01832 149 RVPSYTASKHGVAGLTKLLANEWA--AKGINVNAI 181 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhC--ccCcEEEEE
Confidence 222344443333345666777763 444544333
No 193
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.05 E-value=0.0031 Score=59.88 Aligned_cols=64 Identities=19% Similarity=0.273 Sum_probs=46.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||+|||. |.+|+.++..|...|+ +|.++|+++... ..+.... ... .+++++++++||+||++.
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~--~~~~~~g----~~~---~~~~~e~~~~~d~vi~~v 66 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAV--AEVIAAG----AET---ASTAKAVAEQCDVIITML 66 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHH--HHHHHCC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 58999998 9999999999998887 899999876221 1122111 111 245678889999999984
No 194
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.011 Score=54.16 Aligned_cols=156 Identities=13% Similarity=0.090 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCC---chhhhhC------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------ 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al~------ 108 (353)
.++|.|+||+|.+|..++..|++.|. +|++++.++ ......++.... ..+..+. .-+ +.+++++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAG--GEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999998887 899999876 222333343321 2222211 112 2223333
Q ss_pred -CCcEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618 109 -GMDLVIIPAGVPRKP----GMTRD---DLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG 176 (353)
Q Consensus 109 -~ADiVIi~ag~~~~~----g~~r~---~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~ 176 (353)
..|+||..+|..... ..+.. +.+..|+.....+.+ .+.+. ..+.++++|..... .
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~------------~ 149 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGL------------G 149 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhc------------c
Confidence 459999998864221 22222 334566655544433 33322 23455555542211 1
Q ss_pred CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
+.+..-.++.+......+-+.+++.+. +..+++..+.
T Consensus 150 ~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~i~ 186 (253)
T PRK06172 150 AAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIRVNAVC 186 (253)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEEEEE
Confidence 222223344443333456666777663 4456555443
No 195
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.05 E-value=0.0073 Score=54.33 Aligned_cols=33 Identities=33% Similarity=0.438 Sum_probs=30.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 76 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~ 76 (353)
.||+|+|+ |.+|+.++..|+..|. .+++|+|.+
T Consensus 22 ~~V~IvG~-GglGs~ia~~La~~Gv-g~i~lvD~D 54 (200)
T TIGR02354 22 ATVAICGL-GGLGSNVAINLARAGI-GKLILVDFD 54 (200)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 39999999 9999999999999987 489999988
No 196
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.011 Score=55.01 Aligned_cols=117 Identities=17% Similarity=0.191 Sum_probs=66.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
..+|.|+||+|.+|..++..|+..|. +|+++|++. ......++.... ..+..+. .-+| .++++
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAG--PEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34899999999999999999998887 899999865 222223333211 1111110 1112 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCCC
Q 018618 108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPV 161 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv 161 (353)
...|++|..+|..... ..+. ...+..|+.....+.+.+..+ .+++.++++|.+.
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~ 146 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ 146 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence 3569999988743211 1222 233456666655555554432 1346677776643
No 197
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0094 Score=55.19 Aligned_cols=152 Identities=14% Similarity=0.111 Sum_probs=80.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
+++.|+||+|.+|..++..|+..|. +|++.|++.. .....++. ..+..+. .-+| .+++ +.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLG-----ERARFIATDITDDAAIERAVATVVARFG 79 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4899999999999999999999998 9999998752 22222221 1111111 1112 2222 24
Q ss_pred CCcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618 109 GMDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 181 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~--g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~ 181 (353)
..|++|..+|..... ..+. ...+..|+.....+.+.+..+ .+.+.+++++.-.... +.+..
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~~~ 147 (261)
T PRK08265 80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF------------AQTGR 147 (261)
T ss_pred CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc------------CCCCC
Confidence 679999998864221 1222 233455665544444443322 3456666665422111 12222
Q ss_pred ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
-.++.+......+-+.++..+. +..|++..+
T Consensus 148 ~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v 178 (261)
T PRK08265 148 WLYPASKAAIRQLTRSMAMDLA--PDGIRVNSV 178 (261)
T ss_pred chhHHHHHHHHHHHHHHHHHhc--ccCEEEEEE
Confidence 2344443333455566666653 344554444
No 198
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.03 E-value=0.0039 Score=57.50 Aligned_cols=112 Identities=15% Similarity=0.083 Sum_probs=64.0
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe----C-CCchhhhh-CCCcEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----G-QPQLENAL-TGMDLV 113 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~----~-t~d~~~al-~~ADiV 113 (353)
+++||.|+||+|++|+.++..|+..|+ +|+++.++....... +.. ...+..+. . ..++.+++ .++|+|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~-~~~---~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKTS-LPQ---DPSLQIVRADVTEGSDKLVEAIGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHHh-ccc---CCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence 357999999999999999999998887 788777654211111 111 11121111 1 12344566 689999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618 114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 159 (353)
|.++|.....+. ...+..|......+++.+.+....-+|.+.|.
T Consensus 90 i~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 998775322111 11123444556677777766544333433333
No 199
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.03 E-value=0.0063 Score=55.22 Aligned_cols=113 Identities=20% Similarity=0.325 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhh-------hh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~-------al 107 (353)
.+++.|+||+|.+|+.++..|++.|. .+++.+.+. +.....++. ..+..+. .-+| +++ .+
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELG-----ERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999887 788887764 222222221 1111111 1112 111 13
Q ss_pred CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCC
Q 018618 108 TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 160 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 160 (353)
...|+||..+|..... . .+....+..|+.....+++.+.+. .+.+.+++++..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 140 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSV 140 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence 4689999998864211 1 122344566766655555554322 234566666653
No 200
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.058 Score=50.15 Aligned_cols=118 Identities=19% Similarity=0.176 Sum_probs=66.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCch----------hhhhCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL----------ENALTG 109 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~----------~~al~~ 109 (353)
+++.|+||+|.+|..++..|+..|. +|++++.++ ......++..............-+|. .+.+..
T Consensus 1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 3799999999999999999999887 899999875 22223333322111111000011121 122356
Q ss_pred CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecCCC
Q 018618 110 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIA----KCCPNATVNLISNPV 161 (353)
Q Consensus 110 ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tNPv 161 (353)
.|+||..+|..... ..+. ...+..|+.....+++.+. +....+.+++++...
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 140 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA 140 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence 89999998864211 1222 2345666665555555543 223345666666543
No 201
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.02 E-value=0.0089 Score=57.39 Aligned_cols=111 Identities=13% Similarity=0.040 Sum_probs=69.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHH-----HHHHhcC-----CCC-CeEEEEeCC----------C
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-----TADISHM-----DTG-AVVRGFLGQ----------P 101 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~-----~~dl~~~-----~~~-~~v~~~~~t----------~ 101 (353)
+|.|+||+|++|++++..|+..|...+|+++.+...... ...+... ... ..+..+.+. .
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 588999999999999999998875447888887652111 1111110 000 234333221 1
Q ss_pred chhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018618 102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 154 (353)
Q Consensus 102 d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v 154 (353)
++.+..+++|+||.+++... ......++...|+.....+++.+.+.....++
T Consensus 81 ~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v 132 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGRAKPLH 132 (367)
T ss_pred HHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCCCceEE
Confidence 24455688999999987542 12334556678999899998888776544333
No 202
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.027 Score=51.86 Aligned_cols=157 Identities=18% Similarity=0.175 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
.+++.|+||+|.+|.+++..|++.|. +|+++|.++ ......++........+..+. .-+| .++++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 34799999999999999999999987 899999876 233333443311112222211 1122 22222
Q ss_pred CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 108 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
...|++|..+|.... + ..+ ....+..|+.....+.+. +.+. ..+.|+++|...... +
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~ 151 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTHAFK------------I 151 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChhhcc------------C
Confidence 368999999985421 1 112 223345565554444444 4332 345666665432111 1
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.+..-.++.+......+-+.+++.+. +..|++..+
T Consensus 152 ~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIrvn~v 186 (260)
T PRK07063 152 IPGCFPYPVAKHGLLGLTRALGIEYA--ARNVRVNAI 186 (260)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence 22222344443333455666777663 445554444
No 203
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.01 E-value=0.038 Score=50.53 Aligned_cols=101 Identities=22% Similarity=0.230 Sum_probs=58.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe-CCCchh---h-------hh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQLE---N-------AL 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~t~d~~---~-------al 107 (353)
++|.|+||+|.+|++++..|++.|. +++++|.+.. .....++.... .++..+. .-+|.+ + .+
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPDDEELAATQQELRALG--VEVIFFPADVADLSAHEAMLDAAQAAW 78 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999987 8999997542 11222232211 1222211 112221 1 12
Q ss_pred CCCcEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHH
Q 018618 108 TGMDLVIIPAGVPRK---P--GMTR---DDLFNINAGIVRTLCEGIA 146 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~---~--g~~r---~~~~~~N~~i~~~i~~~i~ 146 (353)
...|+||+++|.+.. + ..+. .+.+..|+.....+.+.+.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 125 (256)
T PRK12745 79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVA 125 (256)
T ss_pred CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 468999999986421 1 1122 2345666666555555443
No 204
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.014 Score=53.70 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=67.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~ 108 (353)
++|.|+||+|.+|..++..|+..|. +|+++|++. .+....++.... ..+..+. .-+|. ++++ .
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998887 899999876 222233343322 2222211 11222 2222 3
Q ss_pred CCcEEEEcCCCCCCCC---C-CH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCC
Q 018618 109 GMDLVIIPAGVPRKPG---M-TR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISNP 160 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g---~-~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP 160 (353)
+.|+||.++|...... . +. ...+..|+.....+.+.+..+- ..+.++++|..
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~ 138 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSL 138 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 6899999987543211 1 22 2335667766666666654322 23556665543
No 205
>PLN02996 fatty acyl-CoA reductase
Probab=97.00 E-value=0.012 Score=60.21 Aligned_cols=120 Identities=16% Similarity=0.113 Sum_probs=73.2
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCC----cH-HHHHHHhcCC------------C----CCeEE
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN----TP-GVTADISHMD------------T----GAVVR 95 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~----~~-~~~~dl~~~~------------~----~~~v~ 95 (353)
|-+.+.|.|+||+|++|++++..|+.. +-..+|.++.+.. .. ....++.... . ..++.
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 445568999999999999999887764 4455777777644 11 1111111100 0 02333
Q ss_pred EEeCC----------Cc-hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618 96 GFLGQ----------PQ-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 158 (353)
Q Consensus 96 ~~~~t----------~d-~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 158 (353)
.+.+. .+ +++.++++|+||++|+... ......+....|+....++++.+.+.. ...+|.+.|
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST 161 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 33221 11 3456689999999987543 233455677889999999999887652 333444443
No 206
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.00 E-value=0.0059 Score=59.87 Aligned_cols=68 Identities=22% Similarity=0.260 Sum_probs=46.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+||+|||. |.+|.+++..|...|+ ++.++|.+............. .... .++++++++++||+||++.
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~~---~~~~--~~~~~~~~~~~aDlVilav 68 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGFG---VIDE--LAADLQRAAAEADLIVLAV 68 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcCC---CCcc--cccCHHHHhcCCCEEEEeC
Confidence 37999999 9999999999999987 778888776221111111111 1111 1246678889999999985
No 207
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.023 Score=51.65 Aligned_cols=115 Identities=14% Similarity=0.202 Sum_probs=67.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al------- 107 (353)
.++|.|+||+|.+|+.++..|++.|. ++++++.++ ......++.... ..+..+. .-+|. ++++
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999887 899998765 222333443221 2222221 11221 1222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
.+.|+||..+|..... ..+. ...+..|......+.+.+..+ .+.+.++++|.
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 5789999998864321 1122 233456766666666555433 22456666654
No 208
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0083 Score=55.30 Aligned_cols=34 Identities=38% Similarity=0.376 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
++|.|+||+|.+|..++..|++.|. +|+++|.+.
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~ 36 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGA--TLGLVARRT 36 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999999887 899999875
No 209
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0095 Score=54.59 Aligned_cols=113 Identities=20% Similarity=0.329 Sum_probs=65.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEE-eCCCc---hhhh-------hC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------LT 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~-~~t~d---~~~a-------l~ 108 (353)
.++|.|+||+|.+|++++..|++.|. +|++++++.. .....++.. ..+..+ ..-+| .++. +.
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLG----GNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhC----CceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 35899999999999999999999887 8999998752 222222221 111111 01112 2222 23
Q ss_pred CCcEEEEcCCCCCC-CC--CC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRK-PG--MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-~g--~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
..|+||..+|.... +. .+ ....+..|+.....+.+.+..+ ...+.++++|.
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 148 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 67999999886421 11 11 2234566766666666665543 22455665554
No 210
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.97 E-value=0.0084 Score=55.04 Aligned_cols=118 Identities=13% Similarity=0.122 Sum_probs=68.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-C---CCchhhhh------
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-G---QPQLENAL------ 107 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~---t~d~~~al------ 107 (353)
+.++|.|+||+|.+|+.++..|+..|. +|+++|+++ ......++.... ..+..+. . ..++..++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAG--GAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 346899999999999999999998887 899999876 233333443221 1122211 1 11222222
Q ss_pred -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCC
Q 018618 108 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPV 161 (353)
Q Consensus 108 -~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv 161 (353)
...|+||..+|..... ..+ ....+..|+.....+.+.+.++ ...+.+++++...
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 149 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIA 149 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeech
Confidence 3458999998853211 112 2234566766555555444332 2345666666543
No 211
>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases. It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.
Probab=96.97 E-value=0.0054 Score=56.35 Aligned_cols=71 Identities=8% Similarity=0.014 Sum_probs=47.5
Q ss_pred HHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018618 274 KFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGI 348 (353)
Q Consensus 274 ~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~ 348 (353)
.++++|.++.+ .++.++ -++|.+ |+|.++++||+|+++|+.++.. ++|++..++++......-+-.++.++
T Consensus 141 ~~i~~i~~~~~---~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~~~e~L~veAa~ 215 (232)
T PF11975_consen 141 AAIEAIYNDKP---KRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVKAYERLTVEAAL 215 (232)
T ss_dssp HHHHHHHHSSE---EEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC---eEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445576654 355454 578885 8899999999999999999776 69999999988876666555555544
No 212
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.95 E-value=0.011 Score=54.46 Aligned_cols=69 Identities=10% Similarity=0.185 Sum_probs=45.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.+||+|||+ |.+|..++..+...+. ..+++.++.+.. ....++.+.. .+.. ++|+++.++++|+||++.
T Consensus 4 ~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~~~~---~~~~~~~~~~~DiViiav 74 (245)
T PRK07634 4 KHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY---NVST---TTDWKQHVTSVDTIVLAM 74 (245)
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc---CcEE---eCChHHHHhcCCEEEEec
Confidence 579999998 9999999998887652 334777876431 1122232211 1222 245678889999999984
No 213
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.013 Score=53.69 Aligned_cols=141 Identities=11% Similarity=0.073 Sum_probs=79.0
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe----CCCchhhhh-------CC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENAL-------TG 109 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al-------~~ 109 (353)
.+++.|+||+|.+|..++..|+..|. +|+++|.+... .... ..+..+. ...+.++++ ..
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVDG----RPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhcC----CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999887 89999986522 1111 1111111 111233333 34
Q ss_pred CcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHh----hCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 110 MDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 110 ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
.|+||..+|.... + ..+ ....+..|+.....+.+.+.. ....+.+|++|.-.... +.+
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~ 143 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------PSP 143 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------CCC
Confidence 5999999885321 1 111 234456676666666655543 22335666666432211 122
Q ss_pred CCceEeechhhHHHHHHHHHHHhC
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
..-.++.+......+-+.++..++
T Consensus 144 ~~~~Y~~sK~a~~~l~~~la~e~~ 167 (252)
T PRK07856 144 GTAAYGAAKAGLLNLTRSLAVEWA 167 (252)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhc
Confidence 233444444334456666777765
No 214
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.03 Score=51.24 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhh-------h
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------A 106 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~-------a 106 (353)
..++|.|+||+|.+|++++..|+..|. +|+++|+++ ......++.... ..+..+. .-+| ++. .
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999998 899999876 222233333211 1111111 1122 212 2
Q ss_pred hCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618 107 LTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 159 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 159 (353)
+...|+||+.+|.... + ..+. ...+..|+.....+.+.+..+- ....+|++|.
T Consensus 80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 2468999999886321 1 2222 3345667666666666665431 1245666554
No 215
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.012 Score=53.62 Aligned_cols=110 Identities=19% Similarity=0.154 Sum_probs=65.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL----------ENALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~ 108 (353)
++|.|+||+|.+|++++..|+..|. +|++++++.. .....++ . ..+..+. ...|. .+.+.
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAEL---G--ESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999987 8999998751 1111111 1 1121111 11222 12234
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618 109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 158 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 158 (353)
+.|+||..+|..... ..+ ....+..|+.....+.+.+..+- ..+.+++++
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~ 136 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNG 136 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 689999998864321 112 22456778877777777776531 223444443
No 216
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=96.92 E-value=0.0044 Score=59.47 Aligned_cols=120 Identities=22% Similarity=0.241 Sum_probs=72.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHH---HHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~---dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||+|+|+ |.||+.++..|.+.|. ++.++-+.+. +.... .+.+.......... .+++ .+....+|+||++.
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~~~-~~~~-~~~~~~~Dlviv~v 75 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTPVV-AATD-AEALGPADLVIVTV 75 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCccccccc-cccC-hhhcCCCCEEEEEe
Confidence 79999999 9999999999999983 6666665442 11111 11111110111111 1223 46678999999986
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce-Eeechh
Q 018618 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL-LGVTML 189 (353)
Q Consensus 118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv-iG~t~l 189 (353)
...+ ..+..+.+..+. |+++|+..=|=.+..- .+++. ++.+++ .|+|..
T Consensus 76 Ka~q----------------~~~al~~l~~~~~~~t~vl~lqNG~g~~e-----~l~~~--~~~~~il~G~~~~ 126 (307)
T COG1893 76 KAYQ----------------LEEALPSLAPLLGPNTVVLFLQNGLGHEE-----ELRKI--LPKETVLGGVTTH 126 (307)
T ss_pred cccc----------------HHHHHHHhhhcCCCCcEEEEEeCCCcHHH-----HHHHh--CCcceEEEEEeee
Confidence 3221 456677777776 6778887778887663 23332 455555 467543
No 217
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.92 E-value=0.005 Score=62.52 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=62.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC--CCCCeEEEEeCCCchhhhhC---CCcEEEEc
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTGAVVRGFLGQPQLENALT---GMDLVIIP 116 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~---~ADiVIi~ 116 (353)
.+|+|||. |.+|+++|..|+..|+ +|.++|+++.. +.++... .....+.. ..+++++++ ++|+|++.
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~---~~s~~e~v~~l~~~d~Iil~ 73 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKG---YHTLEELVNSLKKPRKVILL 73 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCccee---cCCHHHHHhcCCCCCEEEEE
Confidence 58999999 9999999999999998 99999987622 1222211 00112222 346666665 58988886
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCch
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNST 164 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~ 164 (353)
... .+.++++++.+..+ .|+.+||..||-....
T Consensus 74 v~~---------------~~~v~~vi~~l~~~L~~g~iIID~gn~~~~d 107 (470)
T PTZ00142 74 IKA---------------GEAVDETIDNLLPLLEKGDIIIDGGNEWYLN 107 (470)
T ss_pred eCC---------------hHHHHHHHHHHHhhCCCCCEEEECCCCCHHH
Confidence 311 12344444555444 3677888887754333
No 218
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.015 Score=52.97 Aligned_cols=145 Identities=19% Similarity=0.145 Sum_probs=79.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCC-eEEE-EeCCCchhhhhCC----CcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA-VVRG-FLGQPQLENALTG----MDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~-~v~~-~~~t~d~~~al~~----ADiVIi 115 (353)
.++.|+||+|.+|..++..|+..|. +|+++|+++... .++....... .+.. .....+.+++++. .|.+|+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSVL--DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 4789999999999999999999887 899999875211 1121111001 1111 1111233333333 477888
Q ss_pred cCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeech
Q 018618 116 PAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM 188 (353)
Q Consensus 116 ~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ 188 (353)
.+|..... ..+. ...+..|+.....+.+.+..+- +...+++++...... +.+..-.++.+.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~asK 145 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL------------ALPRAEAYGASK 145 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc------------CCCCCchhhHHH
Confidence 77643211 1222 3456778877777777766542 345556555422111 233333455554
Q ss_pred hhHHHHHHHHHHHh
Q 018618 189 LDVVRANTFVAEVL 202 (353)
Q Consensus 189 ld~~R~~~~lA~~l 202 (353)
.....+.+.++..+
T Consensus 146 ~a~~~~~~~l~~e~ 159 (240)
T PRK06101 146 AAVAYFARTLQLDL 159 (240)
T ss_pred HHHHHHHHHHHHHH
Confidence 44445666666544
No 219
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.90 E-value=0.0071 Score=56.90 Aligned_cols=66 Identities=23% Similarity=0.343 Sum_probs=44.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||+|||. |.+|..++..|...|+..+|+.+|+++.. ...+..... ... ..++.+ +.+||+||++.
T Consensus 1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~--~~~~~~~g~---~~~---~~~~~~-~~~aD~Vilav 66 (275)
T PRK08507 1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELH--LKKALELGL---VDE---IVSFEE-LKKCDVIFLAI 66 (275)
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHH--HHHHHHCCC---Ccc---cCCHHH-HhcCCEEEEeC
Confidence 58999998 99999999999988865588999987521 111222111 111 124444 45699999985
No 220
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.88 E-value=0.017 Score=52.15 Aligned_cols=113 Identities=17% Similarity=0.262 Sum_probs=67.2
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG 109 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~ 109 (353)
|.|+|++|.+|+.++..|++.|+ ++++++.+. ......++.+.. ..+.... .-+| +++++ ..
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYG--VKALGVVCDVSDREDVKAVVEEIEEELGP 76 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999987 899998764 222333343322 1222111 1112 22333 34
Q ss_pred CcEEEEcCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCC
Q 018618 110 MDLVIIPAGVPRKP---GM---TRDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP 160 (353)
Q Consensus 110 ADiVIi~ag~~~~~---g~---~r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP 160 (353)
.|+||..+|..... +. .....+..|+.....+.+.+..+. ....++++|..
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 77 IDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 69999998864211 11 233456778887777777776542 23456666553
No 221
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.88 E-value=0.0075 Score=56.93 Aligned_cols=100 Identities=17% Similarity=0.113 Sum_probs=62.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
++||+|||+ |.+|..++..|...+. ..+|+++|.+... ....+... ...+.. +++..++++++|+||++..
T Consensus 1 m~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~--~~~~~~---~~~~~e~~~~aDvVilavp 73 (277)
T PRK06928 1 MEKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDK--YPTVEL---ADNEAEIFTKCDHSFICVP 73 (277)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHH--cCCeEE---eCCHHHHHhhCCEEEEecC
Confidence 368999998 9999999999988772 2488999986521 12222211 112222 2355677899999999852
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS 163 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~ 163 (353)
...+.++++.+..+- ++..||.+.+-++.
T Consensus 74 ----------------p~~~~~vl~~l~~~l~~~~~ivS~~aGi~~ 103 (277)
T PRK06928 74 ----------------PLAVLPLLKDCAPVLTPDRHVVSIAAGVSL 103 (277)
T ss_pred ----------------HHHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence 122445666665544 45566666665543
No 222
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.88 E-value=0.0056 Score=58.37 Aligned_cols=64 Identities=20% Similarity=0.313 Sum_probs=47.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+||+|||. |.+|..++..|+..|+ +|.++|+++.. ..++.... .. ...++.+++++||+||++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g----~~---~~~s~~~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKG----AT---PAASPAQAAAGAEFVITML 65 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcC----Cc---ccCCHHHHHhcCCEEEEec
Confidence 48999999 9999999999999887 89999987622 22232211 11 1235567889999999984
No 223
>PRK06182 short chain dehydrogenase; Validated
Probab=96.88 E-value=0.011 Score=54.98 Aligned_cols=113 Identities=13% Similarity=0.112 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhC-------CCcE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT-------GMDL 112 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~-------~ADi 112 (353)
.++|.|+||+|.+|..++..|.+.|. +|++.+++... ..++..... ..+.. .....+.+++++ +.|+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~--l~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDK--MEDLASLGV-HPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHhCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 35899999999999999999999887 89999986521 112221111 11111 111122333333 7899
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618 113 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 113 VIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 159 (353)
+|+.+|..... ..+ ....+..|... ++.+.+.+++... +.+++++.
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS 133 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS 133 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 99999864211 111 23344556544 5556666665543 45555553
No 224
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.88 E-value=0.0023 Score=54.34 Aligned_cols=118 Identities=17% Similarity=0.181 Sum_probs=71.4
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC---CC--CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---TG--AVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~---~~--~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
|+|+|+ |.+|..+|..|.+.+. ++.+++..+ ......-.... .. ..+.......+.......+|+||++..
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence 789999 9999999999999888 999999865 22211111110 01 112221111222246799999999853
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-ch
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM 188 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ 188 (353)
... ..+.++.++.+. |++.|+.+-|=++..-. +.+. +|+.++++- +.
T Consensus 77 a~~----------------~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~-----l~~~--~~~~~v~~g~~~ 125 (151)
T PF02558_consen 77 AYQ----------------LEQALQSLKPYLDPNTTIVSLQNGMGNEEV-----LAEY--FPRPRVLGGVTT 125 (151)
T ss_dssp GGG----------------HHHHHHHHCTGEETTEEEEEESSSSSHHHH-----HHCH--STGSGEEEEEEE
T ss_pred ccc----------------hHHHHHHHhhccCCCcEEEEEeCCCCcHHH-----HHHH--cCCCcEEEEEEe
Confidence 211 345666677776 67788888887775532 2232 566688654 54
No 225
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.87 E-value=0.0056 Score=60.41 Aligned_cols=53 Identities=19% Similarity=0.354 Sum_probs=43.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.+||+|||+.|.+|..++..|...|+ +|.++|.+.. ++.++++++||+||++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav 150 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV 150 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence 36999999559999999999999987 8999997420 13457789999999985
No 226
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.87 E-value=0.012 Score=53.53 Aligned_cols=114 Identities=18% Similarity=0.277 Sum_probs=66.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC----CCchhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al------- 107 (353)
.++|.|+||+|.+|.+++..|++.|. +|++++++. ......++.... ..+..+.. ..++++.+
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999887 899999875 222223333221 22332211 11222222
Q ss_pred CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIA----KCCPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN 159 (353)
...|+||.++|.... + ..+. .+.+..|+.....+.+.+. +.. ...++++|.
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss 142 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSS 142 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEec
Confidence 368999999875421 1 2222 2345666666665655543 333 345555543
No 227
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.86 E-value=0.06 Score=49.59 Aligned_cols=155 Identities=15% Similarity=0.125 Sum_probs=93.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCC-eEEEEeCC-------CchhhhhCCCc
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQ-------PQLENALTGMD 111 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~-~v~~~~~t-------~d~~~al~~AD 111 (353)
+-+.|+||++-+|...|..|.+.|. .|+|..++. ++.++.++.+....+ .+... .. ....+.+...|
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DVt-D~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDVT-DRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeeccC-CHHHHHHHHHHHHHhhCccc
Confidence 3578889999999999999999999 999999987 566666666411111 11110 00 11334567899
Q ss_pred EEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618 112 LVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 181 (353)
Q Consensus 112 iVIi~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~ 181 (353)
++|..||...... .+...++..|+..+...... +.+. ..+.||+.+.-.... -||-.
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiAG~~------------~y~~~ 150 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAGRY------------PYPGG 150 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccccccc------------cCCCC
Confidence 9999999754321 13556778887766655544 4432 356788877644322 25666
Q ss_pred ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.+++-|.-...-|...|-+.+ ....|++..|
T Consensus 151 ~vY~ATK~aV~~fs~~LR~e~--~g~~IRVt~I 181 (246)
T COG4221 151 AVYGATKAAVRAFSLGLRQEL--AGTGIRVTVI 181 (246)
T ss_pred ccchhhHHHHHHHHHHHHHHh--cCCCeeEEEe
Confidence 777765433322333332222 2355554444
No 228
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.86 E-value=0.001 Score=63.01 Aligned_cols=98 Identities=23% Similarity=0.273 Sum_probs=59.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 121 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~ 121 (353)
|||.|+||+|++|+++...|...++ +++.++..+ .|+.+... + .++-+. .+.|+||++++...
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~~---~------~~~~~~-~~pd~Vin~aa~~~ 63 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPEA---V------AKLLEA-FKPDVVINCAAYTN 63 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHHH---H------HHHHHH-H--SEEEE------
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHHH---H------HHHHHH-hCCCeEeccceeec
Confidence 8999999999999999999998887 888887653 12222110 0 011122 25899999987542
Q ss_pred CC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 122 KP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 122 ~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
.. ..........|......+++...+. ++.+|.+|
T Consensus 64 ~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~S 100 (286)
T PF04321_consen 64 VDACEKNPEEAYAINVDATKNLAEACKER--GARLIHIS 100 (286)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEE
T ss_pred HHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEee
Confidence 11 1234556678999999999998865 45555544
No 229
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.86 E-value=0.0064 Score=58.97 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
..++|+|||. |.+|+.+|..|...|. +|+.+|++.... .+. +.. ..++++++++||+|++....
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~~--~~~--------~~~---~~~l~ell~~aDiVil~lP~ 208 (330)
T PRK12480 145 KNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNKD--LDF--------LTY---KDSVKEAIKDADIISLHVPA 208 (330)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhHh--hhh--------hhc---cCCHHHHHhcCCEEEEeCCC
Confidence 4469999999 9999999999987777 999999865210 010 111 24678899999999997421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 159 (353)
. ..+...+. .+.+....|++++|+++-
T Consensus 209 t-----------~~t~~li~--~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 209 N-----------KESYHLFD--KAMFDHVKKGAILVNAAR 235 (330)
T ss_pred c-----------HHHHHHHh--HHHHhcCCCCcEEEEcCC
Confidence 1 11112221 122333347889988873
No 230
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.046 Score=49.98 Aligned_cols=114 Identities=16% Similarity=0.156 Sum_probs=64.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEe-CCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D-~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------ 108 (353)
++|.|+||+|.+|++++..|++.|. ++++.+ ++. ......++.... ..+..+. .-+| ..++++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESNG--GKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999998887 776654 433 122222232111 1122111 1122 222222
Q ss_pred -------CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618 109 -------GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 159 (353)
Q Consensus 109 -------~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 159 (353)
+.|+||+++|...... .+ ....+..|+.....+.+.+..+. ..+.++++|.
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS 147 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISS 147 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 6899999998643211 12 13345577777777777666543 2345555543
No 231
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.85 E-value=0.023 Score=52.28 Aligned_cols=115 Identities=14% Similarity=0.136 Sum_probs=68.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCchh---hh-------h
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---NA-------L 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a-------l 107 (353)
.++|.|+||+|.+|++++..|+..|. +|+++|.+.. .....++.... ..+..+. .-+|.+ ++ +
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEALG--IDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999887 8999998652 22222232211 1222211 112321 11 2
Q ss_pred CCCcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN 159 (353)
...|+||+++|...... . .....+..|+.....+.+.+..+ .+.+.++++|.
T Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS 149 (259)
T PRK08213 88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS 149 (259)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 46799999988532111 1 12345667888777777766554 23455666654
No 232
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.85 E-value=0.0077 Score=57.02 Aligned_cols=65 Identities=20% Similarity=0.258 Sum_probs=48.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+||++||- |.+|+.+|..|...|+ ++..+|+++.+. +..+.... . .. ..++.++.++||+||...
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~G--a--~~---a~s~~eaa~~aDvVitmv 65 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAG--A--TV---AASPAEAAAEADVVITML 65 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcC--C--cc---cCCHHHHHHhCCEEEEec
Confidence 58999998 9999999999999998 999999986432 22233211 1 11 124468899999999974
No 233
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.84 E-value=0.0057 Score=51.95 Aligned_cols=74 Identities=23% Similarity=0.297 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
.+.++|+|+|+ |.+|..++..|...+ ..++.++|.+.. ...+.++.... .... ..+.++.++++|+||.+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGELG--IAIA----YLDLEELLAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhcc--ccee----ecchhhccccCCEEEeC
Confidence 34569999999 999999999998876 348999998762 22232332110 0111 13455668999999998
Q ss_pred CCCC
Q 018618 117 AGVP 120 (353)
Q Consensus 117 ag~~ 120 (353)
....
T Consensus 89 ~~~~ 92 (155)
T cd01065 89 TPVG 92 (155)
T ss_pred cCCC
Confidence 6543
No 234
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.035 Score=50.61 Aligned_cols=113 Identities=19% Similarity=0.191 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
.+++.|+||+|.+|++++..|++.|. ++++++.+.. .....++. . ...+..+. .-+| .++++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA-A--GGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh-c--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999887 8999998752 22222232 1 12222221 1122 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 159 (353)
.+.|+||..+|..... ..+. ...+..|......+.+. +++. ....++++|.
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS 140 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTAS 140 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECC
Confidence 3789999998864211 1222 22355666655444444 3333 3345555544
No 235
>PRK06128 oxidoreductase; Provisional
Probab=96.83 E-value=0.031 Score=53.02 Aligned_cols=115 Identities=23% Similarity=0.256 Sum_probs=68.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEe-CCCc---hhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFL-GQPQ---LEN------- 105 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~------- 105 (353)
.++|.|+||+|.+|.+++..|+..|. +|++.+.+. .......+.... ..+..+. .-+| .++
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAEG--RKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999887 888876543 112222233221 1222111 1112 122
Q ss_pred hhCCCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618 106 ALTGMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 159 (353)
Q Consensus 106 al~~ADiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 159 (353)
.+...|++|..+|... .+ ..+ ....+..|+.....+++.+..+- +.+.+|+++.
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 2346899999998642 11 122 33456778877777777776553 3456666654
No 236
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.027 Score=51.37 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCchh---h-------hh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQLE---N-------AL 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~~---~-------al 107 (353)
.+++.|+||+|.+|.+++..|++.|. +|+++|+++ ......++.+.. ..+..+ ..-+|.+ + .+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADG--GTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999887 899999875 222222333221 111111 1112321 1 12
Q ss_pred CCCcEEEEcCCCCCC----C--CCCH---HHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCCCCchhHHHHHHHHHh
Q 018618 108 TGMDLVIIPAGVPRK----P--GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVFKKA 175 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~----~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv~~~t~~~~~~~~~~ 175 (353)
...|+||+++|.... + ..+. .+.+..|+.....+.+.+..+. +.+.++++|.-..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------------- 148 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA------------- 148 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc-------------
Confidence 468999999986321 1 1222 2345667766666666665442 2345666553111
Q ss_pred CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
+++.-.++.+......+-+.+++.+. ...+.+.++.
T Consensus 149 --~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v~~v~ 184 (250)
T PRK07774 149 --WLYSNFYGLAKVGLNGLTQQLARELG--GMNIRVNAIA 184 (250)
T ss_pred --cCCccccHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence 11222345543333445566666653 3345544443
No 237
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.014 Score=54.40 Aligned_cols=111 Identities=15% Similarity=0.030 Sum_probs=61.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTGM 110 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~~A 110 (353)
++|.|+||+|.+|++++..|++.|. +|++.+.+.... .++.+.. ...+..+. .-+| .++. +...
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATL--ADLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999998887 899999865211 1111110 01111110 1112 1111 2467
Q ss_pred cEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEec
Q 018618 111 DLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t 158 (353)
|.||+++|..... ..+ ....+..|+... +.+.+.+++.... .++++|
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs 135 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG-HIIQIS 135 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEc
Confidence 9999999865321 112 234456676654 4444445544333 455554
No 238
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.82 E-value=0.0094 Score=55.76 Aligned_cols=98 Identities=23% Similarity=0.260 Sum_probs=63.5
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC-CCcEEEEcCCCCCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVPRK 122 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-~ADiVIi~ag~~~~ 122 (353)
|+|+|++|+||+++...|...|+ +|..+-++...... ..+. .+... +.+.+... ++|+||..||.|-.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~~--~~~~----~v~~~---~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKASQ--NLHP----NVTLW---EGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchhh--hcCc----ccccc---chhhhcccCCCCEEEECCCCccc
Confidence 67999999999999999999998 88888877622111 1111 11111 11223333 79999999997732
Q ss_pred CC----CCHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 018618 123 PG----MTRDDLFNINAGIVRTLCEGIAKCCPNA 152 (353)
Q Consensus 123 ~g----~~r~~~~~~N~~i~~~i~~~i~~~~p~a 152 (353)
.. .....+..--+...+.+.+.|.+.....
T Consensus 70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P 103 (297)
T COG1090 70 ERRWTEKQKEEIRQSRINTTEKLVELIAASETKP 103 (297)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCC
Confidence 22 1223444555778888899998766443
No 239
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.82 E-value=0.0057 Score=58.39 Aligned_cols=64 Identities=16% Similarity=0.277 Sum_probs=44.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC---CcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~---ADiVIi~a 117 (353)
|||+|||. |.+|+.++..|...++ +|+++|+++.. +..+.+.. ... ..++++.+++ +|+||++.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~s~~~~~~~~~~advVi~~v 67 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEA--VDVAGKLG----ITA---RHSLEELVSKLEAPRTIWVMV 67 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHHhCCCCCEEEEEe
Confidence 58999998 9999999999998887 89999987522 12232211 111 2345566655 68998874
No 240
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.033 Score=52.63 Aligned_cols=115 Identities=14% Similarity=0.152 Sum_probs=70.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------ 107 (353)
.++|.|+||+|.+|++++..|++.|. +|++++.+. .......+... ...+..+. .-+| .++.+
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999887 899999875 12222223221 12222211 1112 22222
Q ss_pred -CCCcEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecC
Q 018618 108 -TGMDLVIIPAGVPRK--P--GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN 159 (353)
Q Consensus 108 -~~ADiVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN 159 (353)
...|+||..+|.... + ..+ ....+..|+.....+.+.+..+ .+.+.+|++|.
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS 182 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS 182 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 357999999885321 1 122 2345677888888888777654 34556666654
No 241
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.80 E-value=0.012 Score=62.43 Aligned_cols=90 Identities=19% Similarity=0.169 Sum_probs=60.6
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh--CCCcEEEEc
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIP 116 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al--~~ADiVIi~ 116 (353)
.+.|||.|+||+|++|++++..|...|+ ++.. ... |+.+. ..+...+ .+.|+||++
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~-~~~-------~l~d~------------~~v~~~i~~~~pd~Vih~ 435 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEY-GKG-------RLEDR------------SSLLADIRNVKPTHVFNA 435 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhCCC--eEEe-ecc-------ccccH------------HHHHHHHHhhCCCEEEEC
Confidence 3468999999999999999999988776 5421 110 01110 0011222 268999999
Q ss_pred CCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHHhhCC
Q 018618 117 AGVPRKP--G---MTRDDLFNINAGIVRTLCEGIAKCCP 150 (353)
Q Consensus 117 ag~~~~~--g---~~r~~~~~~N~~i~~~i~~~i~~~~p 150 (353)
|+....+ + .+..+....|+....++++.+++.+.
T Consensus 436 Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~ 474 (668)
T PLN02260 436 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL 474 (668)
T ss_pred CcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence 8764322 1 24456778999999999999998754
No 242
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.80 E-value=0.045 Score=49.82 Aligned_cols=114 Identities=12% Similarity=0.189 Sum_probs=65.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL------- 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al------- 107 (353)
.++.|+||+|.+|++++..|++.|. ++++.+.+. ......++.+.. .++..+.. -+| ..+++
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999998887 777665432 222223343221 22322211 122 22223
Q ss_pred CCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
...|+||+++|...... ....+.+..|+.....+.+.+..+ ...+.+++++.
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 34799999988643211 122344567776666666665543 23445555554
No 243
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.031 Score=51.77 Aligned_cols=111 Identities=15% Similarity=0.137 Sum_probs=62.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC-------CCcEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-------GMDLVI 114 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-------~ADiVI 114 (353)
++|.|+||+|.+|++++..|+..|. +|++.+++...... ..+.. ....+. ....+++++++ ..|++|
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~~--~~~~~-~~~~D~-~d~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAAP--IPGVE-LLELDV-TDDASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhccc--cCCCe-eEEeec-CCHHHHHHHHHHHHHhCCCCCEEE
Confidence 4799999999999999999999887 89999986511100 01100 001111 11123334443 469999
Q ss_pred EcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618 115 IPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN 159 (353)
Q Consensus 115 i~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 159 (353)
.++|...... .+ ....+..|......+.+. +++.. .+.++++|.
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS 132 (270)
T PRK06179 79 NNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISS 132 (270)
T ss_pred ECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECC
Confidence 9998643211 11 234455665544444444 44433 345555554
No 244
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.78 E-value=0.022 Score=52.32 Aligned_cols=114 Identities=20% Similarity=0.266 Sum_probs=66.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~ 108 (353)
+++.|+||+|.+|.+++..|+..|. ++++.|.+. ......++.+.. ..+..+. .-+|. ++. +.
T Consensus 10 k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKDIG 85 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999887 999999876 233333443321 1121111 11121 111 23
Q ss_pred CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 159 (353)
..|+||..+|.... + ..+ ....+..|......+.+.+..+. ..+.++++|.
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 145 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS 145 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 57999999886321 1 112 23345667655555555554432 3355666553
No 245
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.78 E-value=0.016 Score=54.70 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=47.0
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.|||+|||+ |.+|..++..|...+. ..+|.++|++.. ....++.... .++.. .+..++.++||+||++.
T Consensus 3 ~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~---g~~~~---~~~~e~~~~aDvVilav 73 (279)
T PRK07679 3 IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY---GVKGT---HNKKELLTDANILFLAM 73 (279)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc---CceEe---CCHHHHHhcCCEEEEEe
Confidence 479999998 9999999999988872 348899987541 1222332211 12222 34567789999999985
No 246
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.78 E-value=0.0076 Score=56.83 Aligned_cols=67 Identities=13% Similarity=0.174 Sum_probs=46.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+||++||+ |.+|++++..|.+.++ ..+|..+|+++. ....+.+.. . +... ++..+.+++||+||++.
T Consensus 3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~--~~~~l~~~~-g--~~~~---~~~~e~~~~aDiIiLav 71 (272)
T PRK12491 3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVS--NLKNASDKY-G--ITIT---TNNNEVANSADILILSI 71 (272)
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHH--HHHHHHHhc-C--cEEe---CCcHHHHhhCCEEEEEe
Confidence 58999998 9999999999998874 457999998652 122232211 1 2221 34456789999999985
No 247
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.77 E-value=0.029 Score=54.01 Aligned_cols=115 Identities=15% Similarity=0.178 Sum_probs=65.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE--eCCCch-------hhhhC--
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQPQL-------ENALT-- 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~--~~t~d~-------~~al~-- 108 (353)
..+.|+||+|.+|.+++..|++.|. +|+++|+++ ++....++........+..+ .-++|. .+.+.
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 4799999999999999999999987 899999976 33334445432111122211 011121 12233
Q ss_pred CCcEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRK---P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~---~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 159 (353)
+.|++|..+|.... + ..+. ...+..|+.....+.+. +.+. ..+.++++|.
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS 193 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGS 193 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEec
Confidence 45589999886421 1 1222 23455666555444444 4333 3455666554
No 248
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.77 E-value=0.0089 Score=53.80 Aligned_cols=74 Identities=22% Similarity=0.340 Sum_probs=48.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----c--------------H--HHHHHHhcCCCCCeEEEEeCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----T--------------P--GVTADISHMDTGAVVRGFLGQ 100 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~--------------~--~~~~dl~~~~~~~~v~~~~~t 100 (353)
.||.|+|+ |.+|+.++..|+..|. .+|.++|.+. + + ..+..+........+..+...
T Consensus 22 ~~VlviG~-GglGs~ia~~La~~Gv-~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 22 SHVLIIGA-GGLGSPAALYLAGAGV-GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCC-CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 49999999 9999999999999986 4999999873 0 1 112233332222334333211
Q ss_pred ---CchhhhhCCCcEEEEcC
Q 018618 101 ---PQLENALTGMDLVIIPA 117 (353)
Q Consensus 101 ---~d~~~al~~ADiVIi~a 117 (353)
.+.++.++++|+||.+.
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~ 119 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCT 119 (202)
T ss_pred CCHHHHHHHHhCCCEEEECC
Confidence 23445689999998874
No 249
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.76 E-value=0.017 Score=52.75 Aligned_cols=153 Identities=12% Similarity=0.066 Sum_probs=80.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE----eCCCchhhhhC-------C-
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALT-------G- 109 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~-------~- 109 (353)
++|.|+||+|.+|++++..|+..|. ++++.+.+... ...++.+.. ...+..+ ....+++++++ .
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQSED-AAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCCCHH-HHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4899999999999999999999887 88776654311 111111110 0112111 11112233332 2
Q ss_pred CcEEEEcCCCCC-------C--CCCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHH
Q 018618 110 MDLVIIPAGVPR-------K--PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKK 174 (353)
Q Consensus 110 ADiVIi~ag~~~-------~--~g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~ 174 (353)
.|++|..+|... . ...+. .+.+..|+.....+.+.+..+ ...+.+++++......
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------- 151 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN---------- 151 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----------
Confidence 899999987521 1 11122 233556665555555554322 2235666666432211
Q ss_pred hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcce
Q 018618 175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP 212 (353)
Q Consensus 175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~ 212 (353)
..++.-.++.+......+-+.+|+.++ +..+++.
T Consensus 152 --~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v~ 185 (253)
T PRK08642 152 --PVVPYHDYTTAKAALLGLTRNLAAELG--PYGITVN 185 (253)
T ss_pred --CCCCccchHHHHHHHHHHHHHHHHHhC--ccCeEEE
Confidence 122223566665556667777887765 3344433
No 250
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.74 E-value=0.013 Score=54.24 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.+++.|+||+|.+|.+++..|++.|. +|+++|++.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 39 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA 39 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 35899999999999999999999998 899999865
No 251
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.02 Score=54.79 Aligned_cols=169 Identities=15% Similarity=0.035 Sum_probs=85.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCch---h-------hhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---E-------NALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~al~ 108 (353)
+++.|+||+|.+|..++..|+..|. +|++.+++.. .....++........+..+. .-.|+ + +...
T Consensus 15 k~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 15 KRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999987 8999998762 22233343211111222211 11222 1 1124
Q ss_pred CCcEEEEcCCCCCCC--CC---CHHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 109 GMDLVIIPAGVPRKP--GM---TRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~--g~---~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
..|++|..+|....+ .. .....+..|... .+.+.+.+++. .+.|+++|.-......+-..-+.....++
T Consensus 93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~~~~ 170 (313)
T PRK05854 93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWERSYA 170 (313)
T ss_pred CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccccccccCc
Confidence 589999999864221 11 122334555443 44555555432 34555554322111000000000001233
Q ss_pred CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
+...++.+.+....+-..+++.+......|.+..+
T Consensus 171 ~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v 205 (313)
T PRK05854 171 GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLA 205 (313)
T ss_pred chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEE
Confidence 34456666655555667777665443444544444
No 252
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.056 Score=49.44 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=47.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEE----eCCCchhhhhC-CCcEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF----LGQPQLENALT-GMDLVI 114 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~-~ADiVI 114 (353)
++|.|+||+|.+|+.++..|++.|. ++++.+.+.. .....+..... ..+... ....++..++. +.|+||
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~id~vi 78 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARRG--LALRVEKLDLTDAIDRAQAAEWDVDVLL 78 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence 3799999999999999999999887 8888887652 11111112111 112211 11123334444 899999
Q ss_pred EcCCCC
Q 018618 115 IPAGVP 120 (353)
Q Consensus 115 i~ag~~ 120 (353)
..+|..
T Consensus 79 ~~ag~~ 84 (257)
T PRK09291 79 NNAGIG 84 (257)
T ss_pred ECCCcC
Confidence 998864
No 253
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.72 E-value=0.019 Score=54.93 Aligned_cols=115 Identities=16% Similarity=0.133 Sum_probs=69.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC------CCC--eEEEEeCCCchhhhhCCCcE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD------TGA--VVRGFLGQPQLENALTGMDL 112 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~------~~~--~v~~~~~t~d~~~al~~ADi 112 (353)
.|||+|+|+ |.||+.++..|...|. +|.++++... ....+.... ... .+... . .+ .+.....|+
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~--~~~~i~~~~Gl~i~~~g~~~~~~~~-~-~~-~~~~~~~D~ 73 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQ--RLAAYQQAGGLTLVEQGQASLYAIP-A-ET-ADAAEPIHR 73 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechH--HHHHHhhcCCeEEeeCCcceeeccC-C-CC-cccccccCE
Confidence 479999999 9999999999998887 8999998531 111111110 011 11111 1 11 123468899
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
||++.... . ..+.++.+..+. +++.|+.+-|=++....+ .+. ++.+++++-
T Consensus 74 viv~vK~~------------~----~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l-----~~~--~~~~~v~~g 125 (305)
T PRK05708 74 LLLACKAY------------D----AEPAVASLAHRLAPGAELLLLQNGLGSQDAV-----AAR--VPHARCIFA 125 (305)
T ss_pred EEEECCHH------------h----HHHHHHHHHhhCCCCCEEEEEeCCCCCHHHH-----HHh--CCCCcEEEE
Confidence 99985211 1 223444555443 788888888988766432 232 566777755
No 254
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.71 E-value=0.028 Score=59.73 Aligned_cols=149 Identities=17% Similarity=0.180 Sum_probs=78.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCc---hhhhhC------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENALT------ 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d---~~~al~------ 108 (353)
.++|.|+||+|.+|.+++..|++.|. +|+++|++. ......++........+..+ ..-+| .+++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999987 999999876 22222333311100111111 11122 223333
Q ss_pred -CCcEEEEcCCCCCC-C--CCCHH---HHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 109 -GMDLVIIPAGVPRK-P--GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 109 -~ADiVIi~ag~~~~-~--g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
+.|+||..+|.... + ..+.. ..+..|+. ..+...+.+++....+.++++|...... +
T Consensus 492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~------------~ 559 (676)
T TIGR02632 492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY------------A 559 (676)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC------------C
Confidence 68999999986431 1 11221 22233433 3445556665544445555554321110 1
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhC
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
.+..-.++.+......+-+.+|..++
T Consensus 560 ~~~~~aY~aSKaA~~~l~r~lA~el~ 585 (676)
T TIGR02632 560 GKNASAYSAAKAAEAHLARCLAAEGG 585 (676)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 12222344444444556666777664
No 255
>PLN02256 arogenate dehydrogenase
Probab=96.71 E-value=0.014 Score=55.97 Aligned_cols=65 Identities=18% Similarity=0.237 Sum_probs=45.3
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh-CCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-~~ADiVIi~a 117 (353)
+.+||+|||. |.+|..++..|...|. +|+.+|.+.....+.++ . . ..+ ++.++.+ .++|+||++.
T Consensus 35 ~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~~---g--v--~~~---~~~~e~~~~~aDvVilav 100 (304)
T PLN02256 35 RKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAEL---G--V--SFF---RDPDDFCEEHPDVVLLCT 100 (304)
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHHc---C--C--eee---CCHHHHhhCCCCEEEEec
Confidence 4579999998 9999999999988776 89999987522222211 1 1 111 3455555 4799999985
No 256
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.71 E-value=0.023 Score=52.34 Aligned_cols=154 Identities=16% Similarity=0.149 Sum_probs=81.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------- 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------- 108 (353)
.++|.|+||+|.+|..++..|++.|. .+++++.++ .......+.... ..+..+. .-+| .++.++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999887 889998864 222222232211 1222211 1122 222233
Q ss_pred CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
..|++|.++|.... + ..+ ....+..|+.....+.+.+..+. ..+.+++++...... +.+
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~ 158 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ------------GGK 158 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc------------CCC
Confidence 67999999886421 1 112 22345566655544444443321 235566665532211 111
Q ss_pred CCceEeechhhHHHHHHHHHHHhCCCCCCCcce
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP 212 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~ 212 (353)
..-.++.+......+-+.+|+.++ +..|++.
T Consensus 159 ~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~ 189 (258)
T PRK06935 159 FVPAYTASKHGVAGLTKAFANELA--AYNIQVN 189 (258)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhh--hhCeEEE
Confidence 112344443333456677777764 3445433
No 257
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.70 E-value=0.0042 Score=58.52 Aligned_cols=154 Identities=15% Similarity=0.148 Sum_probs=83.5
Q ss_pred EEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCCCCCC
Q 018618 45 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGVPRK 122 (353)
Q Consensus 45 ~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag~~~~ 122 (353)
.|+||+|++|++++..|...|. +++++.... . .|+.+ ..++++.++ ++|+||++|+....
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~-~---~Dl~~------------~~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF--TNLVLRTHK-E---LDLTR------------QADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC--cEEEeeccc-c---CCCCC------------HHHHHHHHhccCCCEEEEeeeeecc
Confidence 3899999999999999988876 545443221 0 12211 123344444 57999999875321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc---hhHHHHHHHHHhCCCCC-CceEeechhhHHHHH
Q 018618 123 ---PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS---TVPIAAEVFKKAGTYDP-KKLLGVTMLDVVRAN 195 (353)
Q Consensus 123 ---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~---~t~~~~~~~~~~~~~~~-~kviG~t~ld~~R~~ 195 (353)
......+++..|.....++++.+++....-+|...|--+.. -.++ .+-........| .-.+|.+.....++-
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~-~E~~~~~~~~~p~~~~Y~~sK~~~e~~~ 141 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPI-PETALLTGPPEPTNEWYAIAKIAGIKMC 141 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCC-CHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence 12234567789999999999999987643333332311100 0000 010000001112 123566544444444
Q ss_pred HHHHHHhCCCCCCCc-ceEEeec
Q 018618 196 TFVAEVLGLDPRDVD-VPVVGGH 217 (353)
Q Consensus 196 ~~lA~~l~v~~~~v~-~~viG~h 217 (353)
..+.+..+++...++ ..++|.+
T Consensus 142 ~~~~~~~~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 142 QAYRIQYGWDAISGMPTNLYGPH 164 (306)
T ss_pred HHHHHHhCCCEEEEEecceeCCC
Confidence 455566676654443 4577764
No 258
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.70 E-value=0.038 Score=49.94 Aligned_cols=115 Identities=21% Similarity=0.300 Sum_probs=65.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA------- 106 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a------- 106 (353)
.++|.|+||+|.+|++++..|++.|. ++++...+.. .....++.... ..+..+. .-.| +.++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGALG--GKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999887 7767665542 22222232211 1222211 1112 1122
Q ss_pred hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618 107 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 159 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 159 (353)
+.+.|.||+++|..... ..+. ...+..|+.....+.+.+..+. +...++++|.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 23689999998864321 1122 2335567777777777776543 2345555554
No 259
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.70 E-value=0.012 Score=53.06 Aligned_cols=113 Identities=17% Similarity=0.293 Sum_probs=64.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
++|.|+||+|.+|..++..|++.|. +|.++++++. .....++.... ..+..+. .-.| +.++ +.
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAAG--GEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999988 7999998762 22222333211 1222211 1112 2222 23
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEec
Q 018618 109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 158 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 158 (353)
..|.||..+|..... ..+. .+.+..|+.....+.+.+..+ .....++++|
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~s 140 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNIS 140 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 469999998753211 1122 234556776666666665432 2224555554
No 260
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.70 E-value=0.016 Score=52.31 Aligned_cols=102 Identities=18% Similarity=0.279 Sum_probs=58.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLG-QPQ---LENAL------ 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al------ 107 (353)
+++|.|+||+|.+|+.++..|.+.|+ +++++..... .....++.... ..+..+.. -.| +.+++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEALG--RRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCcCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999988 6666555441 11222222211 22222211 112 22222
Q ss_pred -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHH
Q 018618 108 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIA 146 (353)
Q Consensus 108 -~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~ 146 (353)
.+.|+||+++|..... ..+. .+.+..|+.....+.+.+.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 127 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVV 127 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4679999998853221 1222 3345667666666666653
No 261
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.045 Score=50.78 Aligned_cols=114 Identities=18% Similarity=0.174 Sum_probs=63.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCch-------hhhhCCCc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL-------ENALTGMD 111 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~-------~~al~~AD 111 (353)
.++|.|+||+|.+|..++..|+..|. .|++.++++ ......++..... ...+ .....++ .+.+.+.|
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~D-~~~~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVVG-GPLD-VTDPASFAAFLDAVEADLGPID 80 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccceE-EEcc-CCCHHHHHHHHHHHHHHcCCCC
Confidence 35899999999999999999999887 889999865 2222222221100 0001 0001111 12235689
Q ss_pred EEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEecC
Q 018618 112 LVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 112 iVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN 159 (353)
++|..+|..... ..+ ....+..|+..... +.+.+.+. ..+.|+++|.
T Consensus 81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS 137 (273)
T PRK07825 81 VLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVAS 137 (273)
T ss_pred EEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence 999998864321 112 22345566654444 44444433 3456666654
No 262
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.70 E-value=0.0028 Score=58.07 Aligned_cols=70 Identities=26% Similarity=0.377 Sum_probs=46.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHH-HhcCCCCCeEEEEeCCCc---hhhh-hCCCcEEEEc
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD-ISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIP 116 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~d-l~~~~~~~~v~~~~~t~d---~~~a-l~~ADiVIi~ 116 (353)
|+++|+|+ |.+|+++|..|...|+ +++++|.++.. +.. +.+.....-+.+ ..+| +++| +.++|++|.+
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~--~~~~~~~~~~~~~v~g--d~t~~~~L~~agi~~aD~vva~ 73 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEER--VEEFLADELDTHVVIG--DATDEDVLEEAGIDDADAVVAA 73 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHH--HHHHhhhhcceEEEEe--cCCCHHHHHhcCCCcCCEEEEe
Confidence 68999999 9999999999999998 99999998721 111 121110111222 1123 2333 5888999997
Q ss_pred CC
Q 018618 117 AG 118 (353)
Q Consensus 117 ag 118 (353)
.|
T Consensus 74 t~ 75 (225)
T COG0569 74 TG 75 (225)
T ss_pred eC
Confidence 54
No 263
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.70 E-value=0.0079 Score=57.41 Aligned_cols=64 Identities=16% Similarity=0.232 Sum_probs=44.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC---CcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~---ADiVIi~a 117 (353)
|||+|||. |.+|+.++..|...|+ +|.++|+++.. +.++.+.. ... ..++++..+. +|+||++.
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~~~~e~~~~~~~~dvvi~~v 67 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEA--VEALAEEG----ATG---ADSLEELVAKLPAPRVVWLMV 67 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHhhcCCCCEEEEEe
Confidence 58999999 9999999999999887 89999987622 22233221 111 1244455554 69988874
No 264
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.69 E-value=0.019 Score=52.80 Aligned_cols=155 Identities=16% Similarity=0.179 Sum_probs=83.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCC---chhhhh-------CCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQP---QLENAL-------TGM 110 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al-------~~A 110 (353)
+++.|+||+|.+|..++..|+..|. +|++++.+........+.... .++..+. .-+ +.++++ ...
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEALG--RKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999998 899998754322222232211 1222111 111 222222 357
Q ss_pred cEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618 111 DLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180 (353)
Q Consensus 111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~ 180 (353)
|++|..+|..... ..+ ....+..|+.. .+.+.+.+.+....+.+|+++...... +.+.
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~~ 152 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ------------GGIR 152 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC------------CCCC
Confidence 9999999864321 112 22334556544 444444554433346676665432211 1122
Q ss_pred CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.-.++.+......+-+.+|..+. +..|++..+
T Consensus 153 ~~~Y~asK~a~~~l~~~la~e~~--~~girvn~v 184 (251)
T PRK12481 153 VPSYTASKSAVMGLTRALATELS--QYNINVNAI 184 (251)
T ss_pred CcchHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence 23455554444556667777653 344544444
No 265
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.69 E-value=0.026 Score=56.30 Aligned_cols=125 Identities=20% Similarity=0.193 Sum_probs=69.7
Q ss_pred hcCCCcccch----hhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCC
Q 018618 17 HLYPPNLQNS----CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA 92 (353)
Q Consensus 17 ~~~~~~~~~~----~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~ 92 (353)
|++|.+-.++ ++-+..-++- ..+.++|.|+||+|.+|.+++..|++.|. +++++|.++.. ....+.......
T Consensus 151 ~~~~~~~~~~~~~~~~d~~~~ta~-sl~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~-l~~~~~~~~~~v 226 (406)
T PRK07424 151 HFDNQNAYYCGTFTLVDKLMGTAL-SLKGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDK-ITLEINGEDLPV 226 (406)
T ss_pred EeccccceeeeeEEEeehhcCccc-CCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHHHhhcCCCe
Confidence 6667654432 3333322222 12346899999999999999999999887 88999986521 111122111111
Q ss_pred e-EEE-EeCCCchhhhhCCCcEEEEcCCCCCCCCCCH---HHHHHHHHHHHHHHHHHH
Q 018618 93 V-VRG-FLGQPQLENALTGMDLVIIPAGVPRKPGMTR---DDLFNINAGIVRTLCEGI 145 (353)
Q Consensus 93 ~-v~~-~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r---~~~~~~N~~i~~~i~~~i 145 (353)
. +.. ....++..+.+.+.|++|+.+|.......+. .+.+..|......+++.+
T Consensus 227 ~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~ 284 (406)
T PRK07424 227 KTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELF 284 (406)
T ss_pred EEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 1111233455788999999988643323332 334566665554444443
No 266
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.69 E-value=0.029 Score=51.13 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=64.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL----------ENALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~ 108 (353)
++|.|+||+|.+|+.++..|++.|. +|++++++.. +....++.... ..+..+. .-.|. .+.+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDAG--GSVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3799999999999999999999888 8999998762 22222232211 1222211 11222 23356
Q ss_pred CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN 159 (353)
+.|+||..++.... + ..+ .......|......+.+.+ ++.. ...++++|.
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss 137 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIAS 137 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 78999999875421 1 111 2233455666555555544 4333 234555543
No 267
>PRK09242 tropinone reductase; Provisional
Probab=96.69 E-value=0.072 Score=48.91 Aligned_cols=115 Identities=16% Similarity=0.145 Sum_probs=65.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---h-------hhhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---L-------ENALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~-------~~al~ 108 (353)
+++.|+||+|.+|..++..|++.|. +|++++++. ......++.......++..+.. -.+ . .+.+.
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4899999999999999999999987 899999876 2333334433211122222111 111 1 12345
Q ss_pred CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 159 (353)
..|+||..+|.... + ..+. ...+..|+.....+.+. +++. +.+.++++|.
T Consensus 88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS 147 (257)
T PRK09242 88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGS 147 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence 67999999886321 1 1122 23345566555445444 4333 3455665554
No 268
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.021 Score=53.04 Aligned_cols=113 Identities=19% Similarity=0.134 Sum_probs=63.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~ 108 (353)
++|.|+||+|.+|+.++..|+..|. +|++.|++. ......++.... ..+..+. .-+|. ++.+ .
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAG--GDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999987 899999865 222233343321 1221111 11222 2222 3
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 159 (353)
..|++|..+|..... ..+. ...+..|+.. .+.+.+.+++.. .+.++++|.
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 136 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIAS 136 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence 689999998864321 1222 2234566443 344444454443 345555554
No 269
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.68 E-value=0.039 Score=50.69 Aligned_cols=115 Identities=18% Similarity=0.187 Sum_probs=66.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------h
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l 107 (353)
.++|.|+||+|.+|++++..|...|. +++++|.+. ......++.+.. ..+..+. .-+|. +++ +
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999887 889999765 222233343321 1121111 11222 122 2
Q ss_pred CCCcEEEEcCCCCCC--CCCCHHH---HHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRK--PGMTRDD---LFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~--~g~~r~~---~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
...|++|..+|.... ...+..+ .+..|+.....+.+.+..+ ...+.++++|.
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 146 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 457999999885321 1223232 3566776666666665432 22345555554
No 270
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.079 Score=48.21 Aligned_cols=102 Identities=22% Similarity=0.225 Sum_probs=59.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh----------hhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~----------~al~ 108 (353)
+++.|+||+|.+|.+++..|++.|. +|++.+++. ......++........+..+. .-+|.+ +.+.
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999886 899999876 222233333221112222221 112221 2235
Q ss_pred CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH
Q 018618 109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGI 145 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i 145 (353)
..|+||+.+|...... .+ -...+..|......+.+.+
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 123 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAA 123 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 7899999998643221 11 1233456665554555444
No 271
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.67 E-value=0.0057 Score=51.38 Aligned_cols=75 Identities=20% Similarity=0.312 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
.+..++.|+|| |.+|..++..|...|. .+|.+++++. ++..+..+ ....+.... -+++.+.+.++|+||.+
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~-~~~~~~~~~~~DivI~a 82 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPERAEALAEEF----GGVNIEAIP-LEDLEEALQEADIVINA 82 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHHHHHHHHHH----TGCSEEEEE-GGGHCHHHHTESEEEE-
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHc----Cccccceee-HHHHHHHHhhCCeEEEe
Confidence 34569999999 9999999999999876 4799999875 23333333 112344332 24666788999999998
Q ss_pred CCCC
Q 018618 117 AGVP 120 (353)
Q Consensus 117 ag~~ 120 (353)
.+.+
T Consensus 83 T~~~ 86 (135)
T PF01488_consen 83 TPSG 86 (135)
T ss_dssp SSTT
T ss_pred cCCC
Confidence 6544
No 272
>PRK08589 short chain dehydrogenase; Validated
Probab=96.67 E-value=0.039 Score=51.44 Aligned_cols=154 Identities=14% Similarity=0.156 Sum_probs=82.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
.+++.|+||+|.+|..++..|+..|. +|+++|+++ ......++.+.. ..+..+. .-+| .+++ +.
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNG--GKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999987 899999874 233333443321 1121110 1112 2222 23
Q ss_pred CCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 109 GMDLVIIPAGVPRKPG----MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g----~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
..|++|..+|.....+ .+. ...+..|+... +.+.+.+.+. .+.|++++...... +
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~------------~ 147 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQA------------A 147 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcC------------C
Confidence 5799999998643211 122 22334455433 4444444433 36677766533211 1
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.+..-.++.+......+-+.+|+.++ +..|++..+
T Consensus 148 ~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~v~~v 182 (272)
T PRK08589 148 DLYRSGYNAAKGAVINFTKSIAIEYG--RDGIRANAI 182 (272)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence 12222234433333456677777763 344544433
No 273
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.037 Score=51.12 Aligned_cols=114 Identities=22% Similarity=0.245 Sum_probs=66.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh------hC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA------LT 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a------l~ 108 (353)
.++|.|+||+|.+|..++..|+..|. +|++++++. ......++.. ...+..+. .-.|.+ +. +.
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPY---PGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 35899999999999999999999987 899999875 2222222311 11222211 112221 11 35
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
..|+||.++|..... ..+ ..+.+..|+.....+.+.+..+ .+.+.+++++.
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS 139 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 679999998864321 112 2234556766666666655443 22355665554
No 274
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=96.64 E-value=0.0046 Score=56.11 Aligned_cols=105 Identities=19% Similarity=0.258 Sum_probs=69.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC------cHHH---HHHHhcCC-CCCe------EEEEeCCCchhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGV---TADISHMD-TGAV------VRGFLGQPQLEN 105 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~------~~~~---~~dl~~~~-~~~~------v~~~~~t~d~~~ 105 (353)
-||+|+|. |.+|+..|..++..|+ +|.|||+.+ +... ..+|+... .... +..+++++++.+
T Consensus 4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E 80 (313)
T KOG2305|consen 4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE 80 (313)
T ss_pred cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence 49999997 9999999999999999 999999977 1222 22333221 1111 222345788888
Q ss_pred hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchh
Q 018618 106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV 165 (353)
Q Consensus 106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t 165 (353)
..++|=.|-.++ .+.+...+.+.+++++.. |.. |+.|..+..+.
T Consensus 81 ~vk~Ai~iQEcv--------------pE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~mp 125 (313)
T KOG2305|consen 81 LVKGAIHIQECV--------------PEDLNLKKQLYKQLDEIADPTT--ILASSTSTFMP 125 (313)
T ss_pred HHhhhhhHHhhc--------------hHhhHHHHHHHHHHHHhcCCce--EEeccccccCh
Confidence 888884443332 445666788888888876 554 34555555553
No 275
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.62 E-value=0.04 Score=50.96 Aligned_cols=154 Identities=13% Similarity=0.161 Sum_probs=82.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~ 108 (353)
+++.|+||+|.+|.+++..|+..|. ++++.|.+. ......++.... ..+..+. .-+|. +++ +.
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYRELG--IEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4799999999999999999999887 889998765 222333343221 1222211 11222 122 24
Q ss_pred CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618 109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY 178 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~ 178 (353)
..|++|..+|.... + ..+ ....+..|..... .+.+.+.+ ...+.|++++...... +.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~isS~~~~~------------~~ 153 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSMMSEL------------GR 153 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCccccC------------CC
Confidence 57999999886321 1 112 2233445554433 34444433 2356677666543211 22
Q ss_pred CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
+....++.+......+-+.+++.++ +..|++..+
T Consensus 154 ~~~~~Y~~sKaal~~l~~~la~e~~--~~gi~v~~v 187 (265)
T PRK07097 154 ETVSAYAAAKGGLKMLTKNIASEYG--EANIQCNGI 187 (265)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhh--hcCceEEEE
Confidence 2333455544333456677777663 344544333
No 276
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.024 Score=51.91 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+.++|.|+||+|.+|++++..|+..|. +|++++++.
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~ 43 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV 43 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 346899999999999999999998887 899999875
No 277
>PRK12742 oxidoreductase; Provisional
Probab=96.61 E-value=0.033 Score=50.29 Aligned_cols=156 Identities=17% Similarity=0.200 Sum_probs=80.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCch---hhh---hCCCcEEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---ENA---LTGMDLVI 114 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~---~~a---l~~ADiVI 114 (353)
.++|.|+||+|.+|+.++..|++.|. ++++.+.+... ...++.... ....... ..+|. .+. +...|++|
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~-~~~~~~~-D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQET-GATAVQT-DSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHh-CCeEEec-CCCCHHHHHHHHHHhCCCcEEE
Confidence 35899999999999999999999887 78877654311 111121100 0111111 11222 122 34579999
Q ss_pred EcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618 115 IPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT 187 (353)
Q Consensus 115 i~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t 187 (353)
..+|..... ..+ ....+..|+.....++..+..+ .+.+.+++++.-.... ...+....++.+
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~~Y~~s 149 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-----------MPVAGMAAYAAS 149 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-----------CCCCCCcchHHh
Confidence 998864321 112 2234555665554444333332 2345566555422111 012334456665
Q ss_pred hhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 188 MLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 188 ~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
......+-+.+++.++ +..+++.++
T Consensus 150 Kaa~~~~~~~la~~~~--~~gi~v~~v 174 (237)
T PRK12742 150 KSALQGMARGLARDFG--PRGITINVV 174 (237)
T ss_pred HHHHHHHHHHHHHHHh--hhCeEEEEE
Confidence 5444556677777764 334444333
No 278
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.035 Score=51.33 Aligned_cols=100 Identities=16% Similarity=0.191 Sum_probs=59.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
+++.|+||+|.+|.+++..|+..|. +++++|.+......... +.. ...+.. .....+.++.+...|++|+.+|..
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~~~-~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~ 90 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSESND-ESP-NEWIKWECGKEESLDKQLASLDVLILNHGIN 90 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhhhc-cCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence 3899999999999999999999987 89999986521111111 111 111111 111123445677899999999864
Q ss_pred CCCCCC---HHHHHHHHHHHHHHHHHHH
Q 018618 121 RKPGMT---RDDLFNINAGIVRTLCEGI 145 (353)
Q Consensus 121 ~~~g~~---r~~~~~~N~~i~~~i~~~i 145 (353)
.....+ ..+.+..|+.....+++.+
T Consensus 91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 118 (245)
T PRK12367 91 PGGRQDPENINKALEINALSSWRLLELF 118 (245)
T ss_pred CcCCCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 322222 2344566765555555443
No 279
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.60 E-value=0.11 Score=48.27 Aligned_cols=74 Identities=22% Similarity=0.211 Sum_probs=47.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
+++.|+||+|.+|.+++..|+..|. +|+++|.+. .+....++.+.. ..+..+. .-.| ..++ +.
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQEKAEAVVAEIKAAG--GEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999988 899999875 233333343211 1222211 1112 1122 24
Q ss_pred CCcEEEEcCCC
Q 018618 109 GMDLVIIPAGV 119 (353)
Q Consensus 109 ~ADiVIi~ag~ 119 (353)
..|++|..+|.
T Consensus 87 ~id~li~~ag~ 97 (278)
T PRK08277 87 PCDILINGAGG 97 (278)
T ss_pred CCCEEEECCCC
Confidence 78999999884
No 280
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.051 Score=50.01 Aligned_cols=115 Identities=22% Similarity=0.286 Sum_probs=65.6
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
.+++.|+||+|.+|+.++..|+..|. +|++++.++ ......++... ...+..+. .-++ .+++ +.
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999987 899999875 22222223221 11222211 1122 2222 23
Q ss_pred CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 159 (353)
..|+||..+|.... + ..+ ....+..|+.....+.+.+..+. ..+.++++|.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS 141 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSS 141 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 56999999886321 1 111 23345667666665555544332 2345555543
No 281
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.58 E-value=0.074 Score=48.53 Aligned_cols=112 Identities=17% Similarity=0.269 Sum_probs=63.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch---hhh-------hCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL---ENA-------LTG 109 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l~~ 109 (353)
++.|+||+|.+|..++..|++.|. +|++++.+. ......++.... ..+..+.. -+|. .++ +..
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQAG--GKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999887 899999865 222233343221 22222211 1221 122 235
Q ss_pred CcEEEEcCCCCCC-C--CCCHH---HHHHHHHHH----HHHHHHHHHhhCCCcEEEEec
Q 018618 110 MDLVIIPAGVPRK-P--GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 110 ADiVIi~ag~~~~-~--g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t 158 (353)
.|+||..+|.... + +.+.. ..+..|+.. ++.+.+.+++....+.++++|
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 6999999886321 1 22332 234556543 344455555444445666554
No 282
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.038 Score=52.40 Aligned_cols=169 Identities=18% Similarity=0.090 Sum_probs=86.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeC-CCch---hhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQL---ENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l~ 108 (353)
++|.|+||+|.+|.+++..|++.|. +|++++++.. .....++........+..+.. -.|. +++ +.
T Consensus 17 k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 17 RVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5899999999999999999999987 8999998752 222223331111122222211 1222 121 23
Q ss_pred CCcEEEEcCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCch-hHHHHHHHHHhCCCC
Q 018618 109 GMDLVIIPAGVPRKPG----MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNST-VPIAAEVFKKAGTYD 179 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g----~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~-t~~~~~~~~~~~~~~ 179 (353)
..|++|+.+|....+. ......+..|... .+.+.+.+++.. .+.|+++|...... ...-..-......++
T Consensus 95 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~ 173 (306)
T PRK06197 95 RIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWERRYN 173 (306)
T ss_pred CCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCcccCCC
Confidence 5899999998532111 1122334556555 566666665443 35666665422100 000000000000122
Q ss_pred CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
+...+|.+.+....+-+.+++.+. ...+++.++.
T Consensus 174 ~~~~Y~~SK~a~~~~~~~la~~l~--~~~i~v~~v~ 207 (306)
T PRK06197 174 RVAAYGQSKLANLLFTYELQRRLA--AAGATTIAVA 207 (306)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhh--cCCCCeEEEE
Confidence 333455555555666777777764 3334444443
No 283
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.017 Score=53.97 Aligned_cols=112 Identities=12% Similarity=0.055 Sum_probs=63.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhh--------CCCcE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL--------TGMDL 112 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al--------~~ADi 112 (353)
++|.|+||+|.+|.+++..|++.|. +|++.+++.... .++..... ..+.. .....+.+.++ ...|+
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~~--~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEEDV--AALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 4799999999999999999999887 899999875211 12222111 11111 10011122222 24699
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618 113 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 113 VIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 159 (353)
+|..+|..... ..+ ....+..|+.. .+.+.+.+++.. .+.|+++|.
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS 135 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSS 135 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECC
Confidence 99998764321 112 23345667655 556666666543 345565554
No 284
>PRK07985 oxidoreductase; Provisional
Probab=96.56 E-value=0.12 Score=48.84 Aligned_cols=156 Identities=16% Similarity=0.119 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEe-CCCchh----------h
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFL-GQPQLE----------N 105 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~-~t~d~~----------~ 105 (353)
.+++.|+||+|.+|.+++..|+..|. +|++.+.+. .+.....+.... ..+..+. .-+|.+ +
T Consensus 49 ~k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 49 DRKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEECG--RKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999987 888887643 111111122211 1222111 112211 2
Q ss_pred hhCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 106 ALTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 106 al~~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
.+...|++|+.+|.... + ..+. ...+..|+.....+.+.+..+- ..+.||++|...... +
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~------------~ 192 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ------------P 192 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc------------C
Confidence 23467999999885321 1 2222 3345677766666666655432 346677666432111 1
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.+..-.++.+......+-+.+|+.++ +..|++.++
T Consensus 193 ~~~~~~Y~asKaal~~l~~~la~el~--~~gIrvn~i 227 (294)
T PRK07985 193 SPHLLDYAATKAAILNYSRGLAKQVA--EKGIRVNIV 227 (294)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHh--HhCcEEEEE
Confidence 22223345444333445566666653 334444433
No 285
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.0064 Score=55.99 Aligned_cols=35 Identities=14% Similarity=0.126 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.++|.|+||+|.+|+.++..|++.|. +|+++++++
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~ 43 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSR 43 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCCh
Confidence 35899999999999999999999887 899999865
No 286
>PRK06398 aldose dehydrogenase; Validated
Probab=96.56 E-value=0.037 Score=51.12 Aligned_cols=150 Identities=13% Similarity=0.130 Sum_probs=80.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhh-------hCCCcEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA-------LTGMDLVI 114 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~a-------l~~ADiVI 114 (353)
+++.|+||+|.+|.+++..|++.|. +|+++|+++..........+ ++. ...+.+++ +...|++|
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~----D~~---~~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYNDVDYFKV----DVS---NKEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccCceEEEEc----cCC---CHHHHHHHHHHHHHHcCCCCEEE
Confidence 5899999999999999999999987 89999986521100000000 000 01122222 34689999
Q ss_pred EcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618 115 IPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 185 (353)
Q Consensus 115 i~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG 185 (353)
..+|.... + ..+ ....+..|+.....+.+.+..+ ...+.|+++|.-... ...+..-.++
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~Y~ 145 (258)
T PRK06398 78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF------------AVTRNAAAYV 145 (258)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc------------cCCCCCchhh
Confidence 99886421 1 112 2234566665544444443322 234566666542111 1223334455
Q ss_pred echhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 186 VTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 186 ~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
.+......+-+.+|..++ +. |++..+.
T Consensus 146 ~sKaal~~~~~~la~e~~--~~-i~vn~i~ 172 (258)
T PRK06398 146 TSKHAVLGLTRSIAVDYA--PT-IRCVAVC 172 (258)
T ss_pred hhHHHHHHHHHHHHHHhC--CC-CEEEEEe
Confidence 554444456677777764 22 5544443
No 287
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.092 Score=48.17 Aligned_cols=113 Identities=13% Similarity=0.112 Sum_probs=64.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG 109 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~ 109 (353)
.++.|+||+|.+|..++..|++.|. ++++++.++. .....++.... ..+..+. .-++ ++.++ ..
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQ--PRAEFVQVDLTDDAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4899999999999999999999987 7888887662 22233333221 1222211 1122 22333 25
Q ss_pred CcEEEEcCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEec
Q 018618 110 MDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLIS 158 (353)
Q Consensus 110 ADiVIi~ag~~~~~g-----~~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t 158 (353)
.|+||..+|...... ++..+.+..|+.....+.+.+..+- ..+.+++++
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (258)
T PRK08628 84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS 139 (258)
T ss_pred CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence 799999998542221 1123345667665555555544322 234454444
No 288
>PRK08264 short chain dehydrogenase; Validated
Probab=96.55 E-value=0.034 Score=50.37 Aligned_cols=142 Identities=11% Similarity=0.053 Sum_probs=77.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE----eCCCchhhhh---CCCcEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENAL---TGMDLV 113 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~----~~t~d~~~al---~~ADiV 113 (353)
.++|.|+||+|.+|+.++..|++.|. .+|++++++..+... . ...+..+ ....++++.+ ...|+|
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~~---~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVTD---L----GPRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhhh---c----CCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 34899999999999999999998875 368889876521111 1 1111111 1112223333 357999
Q ss_pred EEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618 114 IIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL 183 (353)
Q Consensus 114 Ii~ag~~~~~----g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv 183 (353)
|..+|..... ..+. .+.+..|......+.+.+... ...+.++++|...... +.+....
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~------------~~~~~~~ 145 (238)
T PRK08264 78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV------------NFPNLGT 145 (238)
T ss_pred EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc------------CCCCchH
Confidence 9999863211 1122 234456666666666654432 2345566665533211 2333334
Q ss_pred EeechhhHHHHHHHHHHHh
Q 018618 184 LGVTMLDVVRANTFVAEVL 202 (353)
Q Consensus 184 iG~t~ld~~R~~~~lA~~l 202 (353)
+|.+......+-..+++.+
T Consensus 146 y~~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 146 YSASKAAAWSLTQALRAEL 164 (238)
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 5555444444555666665
No 289
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.14 Score=46.89 Aligned_cols=156 Identities=19% Similarity=0.161 Sum_probs=82.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---h-------hh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NA 106 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~a 106 (353)
.+++.|+||+|.+|.+++..|+..|. +|++.+.+. ......++.... .....+. .-++. + +.
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNG--GSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHHhcC--CceEEEecccCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999997 788875433 222333343211 1111100 00111 1 11
Q ss_pred ------hCCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHH
Q 018618 107 ------LTGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFK 173 (353)
Q Consensus 107 ------l~~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~ 173 (353)
....|++|..+|.... + ..+ ....+..|+.....+.+.+...- ..+.||++|.-....
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------- 150 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI--------- 150 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc---------
Confidence 1268999999986321 1 112 23345567655555555444332 346666666433211
Q ss_pred HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 174 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 174 ~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
+.+..-.++.+......+-+.+|..++ +..|++..+
T Consensus 151 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~girvn~v 186 (252)
T PRK12747 151 ---SLPDFIAYSMTKGAINTMTFTLAKQLG--ARGITVNAI 186 (252)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHHh--HcCCEEEEE
Confidence 122223355554445566677777764 334443333
No 290
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.23 Score=46.10 Aligned_cols=115 Identities=13% Similarity=0.126 Sum_probs=66.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe----CCCchhhhh------CC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLENAL------TG 109 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al------~~ 109 (353)
+.+.|+||+|.+|..++..|++.|. +|+++|++. +.....++.... ...+..+. ...+.++.+ ..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 3688999999999999999999997 899999875 233333343211 11222211 111222222 35
Q ss_pred CcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618 110 MDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNP 160 (353)
Q Consensus 110 ADiVIi~ag~~~~~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP 160 (353)
.|++|..+|.+... ..+. ...+..| ....+.+.+.+++.. .+.||++|..
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~ 145 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSV 145 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCc
Confidence 79999998864321 1222 2234445 345666666665443 4566666543
No 291
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.0093 Score=54.37 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+|+|.|+||+|.+|..++..|++.|. ++++++.+.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~ 35 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR 35 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence 46899999999999999999998887 899999865
No 292
>PRK09186 flagellin modification protein A; Provisional
Probab=96.53 E-value=0.034 Score=50.89 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.++|.|+||+|.+|.+++..|+..|. +|++.+++.
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~ 38 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK 38 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence 45899999999999999999999987 899998765
No 293
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.11 Score=47.64 Aligned_cols=155 Identities=15% Similarity=0.148 Sum_probs=82.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC------cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-----
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTADISHMDTGAVVRGFL-GQPQ---LENA----- 106 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~------~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a----- 106 (353)
+++.|+||+|.+|.+++..|+..|. ++++++.+. ......++.... ..+..+. .-+| .+++
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAAG--AKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHhC--CcEEEEecCcCCHHHHHHHHHHHH
Confidence 4899999999999999999998887 766665432 112222232211 1222211 1122 2222
Q ss_pred --hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHHHHHHHHHhC
Q 018618 107 --LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKAG 176 (353)
Q Consensus 107 --l~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~~~~~~~~~~ 176 (353)
+...|++|+.+|..... ..+ ....+..|+.....+++.+...- +.+.++++ +......
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~------------ 152 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF------------ 152 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc------------
Confidence 23679999999864211 122 22345567666555555554332 33444433 3322111
Q ss_pred CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
.|..-.++.+......+-+.+++.++ +..|++..+.
T Consensus 153 -~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~ 188 (257)
T PRK12744 153 -TPFYSAYAGSKAPVEHFTRAASKEFG--ARGISVTAVG 188 (257)
T ss_pred -CCCcccchhhHHHHHHHHHHHHHHhC--cCceEEEEEe
Confidence 12223466665555677788888875 3445444443
No 294
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.52 E-value=0.073 Score=48.92 Aligned_cols=155 Identities=13% Similarity=0.168 Sum_probs=82.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TGM 110 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~A 110 (353)
+.+.|+|++|.+|.+++..|++.|. +|+++|.........++.... ..+..+. .-+| .++.+ ...
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTALG--RRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999987 888888765322223333211 1222211 1122 22222 368
Q ss_pred cEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618 111 DLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180 (353)
Q Consensus 111 DiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~ 180 (353)
|++|..+|.... + ..+ ....+..|+.....+.+. +.+..+.+.++++|.-.... +.+.
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~ 154 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ------------GGIR 154 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc------------CCCC
Confidence 999999986421 1 112 334456666554444444 43333456676665422111 1112
Q ss_pred CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.-.++.+......+-+.+|+.+. +..|++..+
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v 186 (253)
T PRK08993 155 VPSYTASKSGVMGVTRLMANEWA--KHNINVNAI 186 (253)
T ss_pred CcchHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence 22345544333345566666653 344544433
No 295
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.52 E-value=0.2 Score=46.13 Aligned_cols=157 Identities=15% Similarity=0.137 Sum_probs=82.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEE-eCCCchh---hh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQLE---NA------- 106 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~-~~t~d~~---~a------- 106 (353)
.+++.|+||+|.+|..++..|+..|. .+++.+.+. ......++.... ..+..+ ..-+|.+ +.
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKAG--GEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999987 777776644 222233343221 122211 1112221 11
Q ss_pred hCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618 107 LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG 176 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~ 176 (353)
+...|++|..+|..... ..+.. ..+..|+.. .+.+.+.+.+....+.++++|.-... .
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------------~ 150 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------------I 150 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------------C
Confidence 23579999998864221 11222 234566443 34455555555545666666542111 1
Q ss_pred CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618 177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215 (353)
Q Consensus 177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG 215 (353)
..|..-.++.+......+-..+++.+. +..|++.++.
T Consensus 151 ~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v~ 187 (261)
T PRK08936 151 PWPLFVHYAASKGGVKLMTETLAMEYA--PKGIRVNNIG 187 (261)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeEEEEEE
Confidence 233333455543333345566666653 3455554443
No 296
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.083 Score=48.38 Aligned_cols=155 Identities=15% Similarity=0.162 Sum_probs=84.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~ 108 (353)
+++.|+||+|.+|..++..|++.|. +|++.+.++ ......++.+.. ..+..+. .-+| .++++ .
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVERFG 82 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999999988 899999876 233333444321 1222211 1112 12222 3
Q ss_pred CCcEEEEcCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 109 GMDLVIIPAGVPR--KP--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 109 ~ADiVIi~ag~~~--~~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
..|++|..+|... .+ ..+ ....+..|+. ..+.+.+.+.+. ..+.+++++...... .+
T Consensus 83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~-----------~~ 150 (254)
T PRK07478 83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHT-----------AG 150 (254)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhc-----------cC
Confidence 6799999988632 12 122 2334566664 444445555443 334555555422110 12
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.+..-.++.+......+-..+++.++ +..|++..+
T Consensus 151 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v 185 (254)
T PRK07478 151 FPGMAAYAASKAGLIGLTQVLAAEYG--AQGIRVNAL 185 (254)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHh--hcCEEEEEE
Confidence 33333455554444556677777764 344544433
No 297
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.50 E-value=0.025 Score=54.18 Aligned_cols=114 Identities=13% Similarity=0.035 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
.++|.|+||+|.+|.+++..|+..|. +|++++++. ......++... ...+..+. .-+| .++++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 34799999999999999999999886 899999865 22223333221 11222211 1122 22222
Q ss_pred CCCcEEEEcCCCCCC----CCCCH---HHHHHHHHHHHHHH----HHHHHhhCC-CcEEEEec
Q 018618 108 TGMDLVIIPAGVPRK----PGMTR---DDLFNINAGIVRTL----CEGIAKCCP-NATVNLIS 158 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~----~g~~r---~~~~~~N~~i~~~i----~~~i~~~~p-~a~viv~t 158 (353)
...|++|..||.... ...+. ...+..|......+ .+.+++... .+.|+++|
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs 144 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG 144 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence 248999999985321 12222 23456666544444 444444332 24555554
No 298
>PRK12743 oxidoreductase; Provisional
Probab=96.50 E-value=0.17 Score=46.51 Aligned_cols=114 Identities=14% Similarity=0.158 Sum_probs=64.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------h
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l 107 (353)
.+|.|+||+|.+|.+++..|++.|. +|++++... ......++.... ..+..+. .-+|. +++ +
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3799999999999999999999987 888876543 222223333221 1222211 11222 122 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN 159 (353)
...|++|+.+|..... ..+ ....+..|+.....+.+.+..+ ...+.++++|.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS 140 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITS 140 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence 3579999998864321 112 2334556666555555544332 23456666665
No 299
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.50 E-value=0.013 Score=56.88 Aligned_cols=97 Identities=21% Similarity=0.284 Sum_probs=62.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
.++|+|||. |.+|+.+|..|..-|. +|..+|+...... +... . .. . .++++.+++||+|++.....
T Consensus 150 gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--~~~~-~----~~-~---~~l~ell~~aDiV~l~lP~t 215 (333)
T PRK13243 150 GKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEA--EKEL-G----AE-Y---RPLEELLRESDFVSLHVPLT 215 (333)
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhh--HHHc-C----CE-e---cCHHHHHhhCCEEEEeCCCC
Confidence 469999999 9999999999987787 8999998652211 1111 1 11 1 25678899999999985211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST 164 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~ 164 (353)
..+-.++.. +.+....|++++|+++ ..+|.-
T Consensus 216 -----------~~T~~~i~~--~~~~~mk~ga~lIN~aRg~~vd~~ 248 (333)
T PRK13243 216 -----------KETYHMINE--ERLKLMKPTAILVNTARGKVVDTK 248 (333)
T ss_pred -----------hHHhhccCH--HHHhcCCCCeEEEECcCchhcCHH
Confidence 111111211 2333345789999986 556544
No 300
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.014 Score=52.97 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||+.|+||+|.+|+.++..|.+.|. +|+++|++.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~ 34 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARR 34 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999999887 899999865
No 301
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.49 E-value=0.023 Score=54.61 Aligned_cols=100 Identities=18% Similarity=0.242 Sum_probs=64.5
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
.+.++|+|+|+ |.+|..++..|...+. .+|.++|++.. ...+..+. ..+.. .+++++++.++|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGV-AEITIANRTYERAEELAKELG-----GNAVP---LDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHcC-----CeEEe---HHHHHHHHhcCCEEEEC
Confidence 35679999999 9999999988887553 48999998752 22222221 12211 13567888999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHH-Hhh-CCCcEEEEecCCCCch
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGI-AKC-CPNATVNLISNPVNST 164 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i-~~~-~p~a~viv~tNPv~~~ 164 (353)
.+.+.. .++.+.+ ... .+..+++-+++|-|+-
T Consensus 246 t~~~~~----------------~~~~~~~~~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 246 TGAPHY----------------AKIVERAMKKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred CCCCch----------------HHHHHHHHhhCCCCCeEEEEeCCCCCCc
Confidence 765521 1211221 111 2456788899998865
No 302
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.039 Score=50.43 Aligned_cols=114 Identities=11% Similarity=0.092 Sum_probs=64.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~ 108 (353)
++|.|+||+|.+|.+++..|...|. .|+++|.+. ......++.+.. .....+. .-+|. +++ +.
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAG--GKAEALACHIGEMEQIDALFAHIRERHG 84 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999887 899999875 233333443321 1111110 11121 222 23
Q ss_pred CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~--~~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
..|++|..+|... .+ ..+. ...+..|+.....+.+.+.++ ...+.+++++.
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 145 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS 145 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence 5799999887421 11 2222 234556665555555444333 22355666554
No 303
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.035 Score=50.90 Aligned_cols=143 Identities=18% Similarity=0.144 Sum_probs=75.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCch---hhhhC-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---ENALT------- 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~---~~al~------- 108 (353)
.++.|+||+|.+|..++..|++.|. +|+++|.+. ......++.. ..+..+ ..-.|. ..++.
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDAAALAAFADALGD----ARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3799999999999999999998887 899999865 2222223321 112111 011222 22332
Q ss_pred CCcEEEEcCCCCCCCC---CCHH---HHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 109 GMDLVIIPAGVPRKPG---MTRD---DLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g---~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
+.|+||..+|...... .+.. ..+..|......+.+.+... ...+.+++++...... ..+.
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------~~~~- 145 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA----------ALGH- 145 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC----------CCCC-
Confidence 5799999987532211 1222 22345655555555555322 2334555555421100 0111
Q ss_pred CCceEeechhhHHHHHHHHHHHhC
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
-.++.+.....++-..+++.++
T Consensus 146 --~~y~~sK~a~~~~~~~~a~~~~ 167 (257)
T PRK07074 146 --PAYSAAKAGLIHYTKLLAVEYG 167 (257)
T ss_pred --cccHHHHHHHHHHHHHHHHHHh
Confidence 1344444444556667777664
No 304
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.057 Score=50.21 Aligned_cols=113 Identities=19% Similarity=0.137 Sum_probs=61.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDLV 113 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADiV 113 (353)
+++.|+||+|.+|..++..|+..|. +|++++++.... .++..... ..+.. .....+.+++ +.+.|+|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 76 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKAEDV--EALAAAGF-TAVQLDVNDGAALARLAEELEAEHGGLDVL 76 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4799999999999999999998887 899999865211 12222111 11111 1111122222 2468999
Q ss_pred EEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618 114 IIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 159 (353)
Q Consensus 114 Ii~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 159 (353)
|..+|.... + ..+. ...+..|+.....+.+.+..+. ..+.+++++.
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 130 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS 130 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 999985421 1 1122 2334556555444444443221 1345666554
No 305
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.46 E-value=0.014 Score=55.03 Aligned_cols=148 Identities=23% Similarity=0.264 Sum_probs=89.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV 119 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag~ 119 (353)
|||.|+|++|++|+.+...|. .+. +++-.|..+ +|+.+.. ...+.++ .-|+||.+|.+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence 679999999999999998887 444 777777654 3443322 1233343 56999999886
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCC--Cch-hHHHHHHHHHhCCCCCCceEeechhhHHH
Q 018618 120 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV--NST-VPIAAEVFKKAGTYDPKKLLGVTMLDVVR 193 (353)
Q Consensus 120 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv--~~~-t~~~~~~~~~~~~~~~~kviG~t~ld~~R 193 (353)
..-. ..++..-+..|......+++..+++ ++++|-+| .-| ..- .+ ++..---.|..++|-+.+....
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiSTDyVFDG~~~~~-----Y~E~D~~~P~nvYG~sKl~GE~ 133 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHISTDYVFDGEKGGP-----YKETDTPNPLNVYGRSKLAGEE 133 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEeecceEecCCCCCC-----CCCCCCCCChhhhhHHHHHHHH
Confidence 5422 2345666789999999999999987 44555443 333 100 00 0010012345677776554332
Q ss_pred HHHHHHHHhCCCCCCC--cceEEeecCCCcc
Q 018618 194 ANTFVAEVLGLDPRDV--DVPVVGGHAGVTI 222 (353)
Q Consensus 194 ~~~~lA~~l~v~~~~v--~~~viG~hg~~~~ 222 (353)
+ .+..+ +-.-| ..|++|++|. +.
T Consensus 134 ~----v~~~~-~~~~I~Rtswv~g~~g~-nF 158 (281)
T COG1091 134 A----VRAAG-PRHLILRTSWVYGEYGN-NF 158 (281)
T ss_pred H----HHHhC-CCEEEEEeeeeecCCCC-CH
Confidence 2 22222 22222 5889999886 44
No 306
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.46 E-value=0.017 Score=53.81 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=45.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||+|||+ |.+|+.++..|...++ ...+.++|.+... +..+.... ...... ++..+++++||+||++.
T Consensus 1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~--~~~~~~---~~~~~~~~~aDvVilav 69 (258)
T PRK06476 1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF--PKVRIA---KDNQAVVDRSDVVFLAV 69 (258)
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc--CCceEe---CCHHHHHHhCCEEEEEe
Confidence 58999998 9999999999988775 3456778875422 22222211 112221 35567789999999985
No 307
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.45 E-value=0.023 Score=55.00 Aligned_cols=66 Identities=18% Similarity=0.141 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+.+||+|||. |.+|.+++..|...|+ +++..+.+....... ..... +.. .+..+++++||+|+++.
T Consensus 16 ~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~~~-A~~~G----~~~----~s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 16 KGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSWKK-AEADG----FEV----LTVAEAAKWADVIMILL 81 (330)
T ss_pred CCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhHHH-HHHCC----Cee----CCHHHHHhcCCEEEEcC
Confidence 3469999999 9999999999999888 888877654211111 11111 111 25678899999999984
No 308
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.45 E-value=0.029 Score=53.99 Aligned_cols=91 Identities=20% Similarity=0.244 Sum_probs=60.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
.++|+|+|. |.+|+.+|..|..-|. +|..+|...... . .+..+....++++.+++||+|+++....
T Consensus 136 g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~--------~---~~~~~~~~~~l~e~l~~aDvvv~~lPlt 201 (312)
T PRK15469 136 DFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSW--------P---GVQSFAGREELSAFLSQTRVLINLLPNT 201 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCC--------C---CceeecccccHHHHHhcCCEEEECCCCC
Confidence 469999999 9999999999997787 999999754110 0 0011111246789999999999984211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
..+..++. .+.+.+..|++++|+++
T Consensus 202 -----------~~T~~li~--~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 202 -----------PETVGIIN--QQLLEQLPDGAYLLNLA 226 (312)
T ss_pred -----------HHHHHHhH--HHHHhcCCCCcEEEECC
Confidence 22222332 23444455889999987
No 309
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.45 E-value=0.011 Score=52.68 Aligned_cols=76 Identities=20% Similarity=0.236 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE--eCCCchhhhhCCCcEEEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQPQLENALTGMDLVII 115 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~--~~t~d~~~al~~ADiVIi 115 (353)
+.+++.|+||+|.+|..++..|...+. ++.+++++. +.....++.+.. ...+... ....++.++++++|+||.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~ 103 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFA 103 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence 346999999889999999999988775 899999865 222223333211 1222221 111234578899999888
Q ss_pred cCC
Q 018618 116 PAG 118 (353)
Q Consensus 116 ~ag 118 (353)
+..
T Consensus 104 at~ 106 (194)
T cd01078 104 AGA 106 (194)
T ss_pred CCC
Confidence 754
No 310
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.44 E-value=0.1 Score=47.45 Aligned_cols=114 Identities=14% Similarity=0.177 Sum_probs=62.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
+++.|+||+|.+|..++..|++.|. ++++. +.+. ......++.... ..+..+. .-+| .+.++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999887 76664 4443 222223333221 2222211 1112 22223
Q ss_pred CCCcEEEEcCCCCC-CC--CCCHH---HHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPR-KP--GMTRD---DLFNINAGIVRTLCEGIAKCC---PNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~-~~--g~~r~---~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 159 (353)
...|+||..+|... .+ ..+.. ..+..|......+++.+..+. +.+.++++|.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS 141 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSS 141 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 35899999987532 11 11222 234566655555555555432 3346666654
No 311
>PRK06196 oxidoreductase; Provisional
Probab=96.44 E-value=0.04 Score=52.58 Aligned_cols=113 Identities=17% Similarity=0.110 Sum_probs=64.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhh-------hCCCcE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENA-------LTGMDL 112 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~a-------l~~ADi 112 (353)
++|.|+||+|.+|.+++..|+..|. +|++++++.. .....++..... ...+. ....+.+++ +.+.|+
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~~-~~~Dl-~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVEV-VMLDL-ADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCeE-EEccC-CCHHHHHHHHHHHHhcCCCCCE
Confidence 4899999999999999999999987 8999998752 222222321110 00111 000111111 246899
Q ss_pred EEEcCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618 113 VIIPAGVPRKPG----MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 113 VIi~ag~~~~~g----~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 159 (353)
+|+.+|....+. ......+..|... .+.+.+.+.+. ..+.|+++|.
T Consensus 103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS 156 (315)
T PRK06196 103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSS 156 (315)
T ss_pred EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECC
Confidence 999998642211 1123344556554 55555555543 2356666654
No 312
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.16 Score=46.61 Aligned_cols=115 Identities=15% Similarity=0.202 Sum_probs=64.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcE-EEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA------- 106 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~e-l~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a------- 106 (353)
.++|.|+||+|.+|+.++..|...|. + |+++|++. ......++... ...+..+. .-++. .++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999998887 5 99999865 22222233221 12222111 11222 222
Q ss_pred hCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618 107 LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEG----IAKCCPNATVNLISN 159 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~---g~~r~---~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 159 (353)
+.+.|++|.++|..... ..+.. ..+..|+.....+.+. +.+....+.++++|.
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss 144 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS 144 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 23689999998865321 12222 2345666555444444 433333355665553
No 313
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.017 Score=53.02 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.++|.|+||+|.+|.+++..|++.|. +|+++|++.
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~ 41 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP 41 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence 35899999999999999999999887 899999875
No 314
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.42 E-value=0.011 Score=56.18 Aligned_cols=63 Identities=16% Similarity=0.304 Sum_probs=45.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||++||. |.+|+.++..|...|+ ++.++|+++. ..++.... ... ..+..++.++||+||++.
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~g----~~~---~~s~~~~~~~advVi~~v 63 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSLG----AVS---VETARQVTEASDIIFIMV 63 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 58999998 9999999999999997 8889998652 12232211 111 124567789999999984
No 315
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.42 E-value=0.022 Score=51.49 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=44.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc------hhhhhCCCcEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ------LENALTGMDLVI 114 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d------~~~al~~ADiVI 114 (353)
|+|.|+||+|.+|..++..|++.+....+++.+.+.... ..+ ..+..+. .-+| +.+.+...|++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~----~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQH----DNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----ccc----CceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 589999999999999999998875433677766654211 111 1111110 1111 223456889999
Q ss_pred EcCCCC
Q 018618 115 IPAGVP 120 (353)
Q Consensus 115 i~ag~~ 120 (353)
.++|..
T Consensus 73 ~~aG~~ 78 (235)
T PRK09009 73 NCVGML 78 (235)
T ss_pred ECCccc
Confidence 999865
No 316
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.42 E-value=0.049 Score=50.03 Aligned_cols=153 Identities=16% Similarity=0.129 Sum_probs=81.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~ 108 (353)
.+++.|+||+|.+|++++..|++.|. +|+++|+++ ......++.... ..+..+. .-+|. +++ +.
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAAG--GEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhcC--CeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 45899999999999999999999987 899999875 222223333211 1221110 11222 222 24
Q ss_pred CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 109 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 109 ~ADiVIi~ag~~~--~~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
..|++|..+|... .+ ..+. ...+..|+- ..+.+.+.+.+.. .+.|+++|..... +
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~-------------~ 149 (260)
T PRK12823 84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR-------------G 149 (260)
T ss_pred CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc-------------C
Confidence 6799999987431 11 1222 223344543 4445555555433 3455555532110 0
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
+..-.++.+......+-+.+++.+. +..|++..+
T Consensus 150 -~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v 183 (260)
T PRK12823 150 -INRVPYSAAKGGVNALTASLAFEYA--EHGIRVNAV 183 (260)
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence 1112355554444556677777763 334443333
No 317
>PRK07574 formate dehydrogenase; Provisional
Probab=96.42 E-value=0.022 Score=56.42 Aligned_cols=100 Identities=17% Similarity=0.215 Sum_probs=63.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
..++|+|+|. |.+|+.+|..|..-|. +|+.+|+........ ... .+.. ..++++.++.||+|++....
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~~~--~~~----g~~~---~~~l~ell~~aDvV~l~lPl 258 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEEVE--QEL----GLTY---HVSFDSLVSVCDVVTIHCPL 258 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchhhH--hhc----Ccee---cCCHHHHhhcCCEEEEcCCC
Confidence 3469999999 9999999999987777 999999865211111 110 1221 13578899999999998421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST 164 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~ 164 (353)
. ..+-.++. .+.+....|.+++|+++ ..+|.-
T Consensus 259 t-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe~ 292 (385)
T PRK07574 259 H-----------PETEHLFD--ADVLSRMKRGSYLVNTARGKIVDRD 292 (385)
T ss_pred C-----------HHHHHHhC--HHHHhcCCCCcEEEECCCCchhhHH
Confidence 1 11222221 23334445789999886 445543
No 318
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.40 E-value=0.15 Score=46.39 Aligned_cols=147 Identities=14% Similarity=0.126 Sum_probs=75.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA------- 106 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a------- 106 (353)
..+|.|+||+|++|++++..|++.|. ++++...+. ......++.... ..+..+. .-++ ...+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAKKRAEEMNETLKMVKENG--GEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHcC--CeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 35899999999999999999998887 666654332 122222222211 1111110 1111 1122
Q ss_pred hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618 107 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD 179 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~ 179 (353)
+...|+||+++|..... +.+. .+.+..|......+++.+.++- +.+.++++|.-.. ..+.+
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------------~~~~~ 149 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG------------IRPAY 149 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc------------cCCCC
Confidence 34679999999863211 1222 2334555555455555444432 2355666554111 11233
Q ss_pred CCceEeechhhHHHHHHHHHHHhC
Q 018618 180 PKKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 180 ~~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
+.-.++.+......+-..+++.++
T Consensus 150 ~~~~Y~~sK~~~~~~~~~l~~~~~ 173 (252)
T PRK06077 150 GLSIYGAMKAAVINLTKYLALELA 173 (252)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHh
Confidence 334455544334455566777764
No 319
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.035 Score=49.68 Aligned_cols=74 Identities=22% Similarity=0.241 Sum_probs=45.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCe-EEE-EeCCCchhhhhC---CCcEEEEc
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALT---GMDLVIIP 116 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~-v~~-~~~t~d~~~al~---~ADiVIi~ 116 (353)
+++.|+||+|.+|+.++..|++. . +|+++|++... ..++.+...... +.. .....+++++++ +.|+||++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 58999999999999999999887 5 89999986521 112221100011 111 101123344444 68999999
Q ss_pred CCCC
Q 018618 117 AGVP 120 (353)
Q Consensus 117 ag~~ 120 (353)
+|..
T Consensus 79 ag~~ 82 (227)
T PRK08219 79 AGVA 82 (227)
T ss_pred CCcC
Confidence 8864
No 320
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.077 Score=51.36 Aligned_cols=114 Identities=18% Similarity=0.084 Sum_probs=64.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
.++|.|+||+|.+|..++..|++.|. +|+++++++ ++....++.... ..+..+. .-+| .++++
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRALG--AEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 35899999999999999999999998 899999876 333333443321 1221110 1122 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN 159 (353)
...|++|..+|..... ..+ ....+..|+-... ...+.+.+.. .+.+|+++.
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS 143 (330)
T PRK06139 83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMIS 143 (330)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence 4679999999864221 111 2234555554443 3444444332 455665543
No 321
>PLN00016 RNA-binding protein; Provisional
Probab=96.39 E-value=0.022 Score=55.94 Aligned_cols=35 Identities=26% Similarity=0.144 Sum_probs=32.0
Q ss_pred CCeEEEE----cCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAIL----GAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~Ii----Ga~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
++||.|+ ||+|++|++++..|+..|+ +|++++++.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~ 90 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGK 90 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCC
Confidence 4689999 9999999999999999998 999999875
No 322
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.39 E-value=0.18 Score=46.62 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=28.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 76 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~ 76 (353)
.+.|+||+|.+|.+++..|++.|. +|++.+.+
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~ 34 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR 34 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence 688999999999999999999988 88887643
No 323
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.38 E-value=0.041 Score=51.05 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=30.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus 34 ~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 66 (245)
T PRK05690 34 RVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFDT 66 (245)
T ss_pred eEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 9999999 9999999999999986 4999999864
No 324
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.081 Score=51.20 Aligned_cols=113 Identities=14% Similarity=0.103 Sum_probs=64.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
++|.|+||+|.+|..++..|+..|. +|+++++++ ......++.... ..+..+. .-+| .+++ +.
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~g--~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAAG--GEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 4899999999999999999999987 899999875 233333443221 1222111 1122 2222 23
Q ss_pred CCcEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHHhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRKP---GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r~---~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN 159 (353)
..|++|..+|..... ..+.. ..+..| +...+.+.+.+.+.. .+.+|+++.
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS 144 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGS 144 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCC
Confidence 689999998853211 11222 223344 444555666665432 355665553
No 325
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.38 E-value=0.05 Score=49.63 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=62.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe----CCCchhhhh-------CC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENAL-------TG 109 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al-------~~ 109 (353)
.+++.|+||+|.+|+.++..|++.|. +++++|.+. +.... ..+..+. ...++++.+ ..
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~-------~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAF-------LTQED--YPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecch-------hhhcC--CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999888 899999864 11000 1111110 011222222 34
Q ss_pred CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
.|+||..+|..... ..+ ....+..|......+++.+..+ .+.+.++++|.
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss 135 (252)
T PRK08220 77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGS 135 (252)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 79999998864211 112 2234566766555555554322 23345555554
No 326
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38 E-value=0.041 Score=49.84 Aligned_cols=102 Identities=22% Similarity=0.286 Sum_probs=59.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL------- 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al------- 107 (353)
++|.|+||+|.+|..++..|++.|. +++++ +.+. .......+... ...+..... -+| +.+.+
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4899999999999999999998887 77887 8765 22222223321 122322211 122 22222
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHh
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK 147 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~ 147 (353)
.+.|+||..+|..... ..+ ....+..|......+.+.+..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP 127 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 2789999998854211 112 233456677765555555543
No 327
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.38 Score=44.28 Aligned_cols=157 Identities=13% Similarity=0.072 Sum_probs=80.0
Q ss_pred CeEEEEcCCC-CcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhh-------h
Q 018618 42 FKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENA-------L 107 (353)
Q Consensus 42 ~KI~IiGa~G-~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l 107 (353)
+++.|+||+| .+|..++..|+..|. +|++.|.+. ......++........+..+.. -++ .+++ +
T Consensus 18 k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 18 KVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4899999977 599999999999987 799999865 2222333332111112322211 112 2222 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
...|++|..+|..... ..+ ..+.+..|+.... ...+.+.+....+.+++++...... .
T Consensus 96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------~ 163 (262)
T PRK07831 96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------A 163 (262)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------C
Confidence 3679999999864211 111 2233445554443 3344444333245555544322111 1
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.+..-.++.+......+-+.+|..+. +..|++..+
T Consensus 164 ~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~v~~i 198 (262)
T PRK07831 164 QHGQAHYAAAKAGVMALTRCSALEAA--EYGVRINAV 198 (262)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence 22233455543333455666666653 445554444
No 328
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.038 Score=50.20 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=64.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~al------- 107 (353)
++++.|+||+|.+|..++..|++.|. +|+++|+++ ......++.... ..+..+. .-+|++ .++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGW--DLALVARSQDALEALAAELRSTG--VKAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhCC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999988 899999875 222222232211 1222211 112222 222
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHHhhCCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN 159 (353)
.+.|++|..+|..... ..+ ....+..|+.....+. +.+.+. ..+.++++|.
T Consensus 82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS 142 (241)
T PRK07454 82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSS 142 (241)
T ss_pred CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence 3589999998864321 112 2233455655444444 444433 2345565554
No 329
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.36 E-value=0.14 Score=46.60 Aligned_cols=32 Identities=28% Similarity=0.303 Sum_probs=27.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV 75 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~ 75 (353)
++|.|+||+|.+|+.++..|++.|. ++++.+.
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~ 34 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW--SVGINYA 34 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeC
Confidence 4799999999999999999999887 7777654
No 330
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.016 Score=52.57 Aligned_cols=115 Identities=18% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhh---CCCcEEEEc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL---TGMDLVIIP 116 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al---~~ADiVIi~ 116 (353)
.+++.|+||+|.+|.+++..|+..|. +|++++++.... .++........+.. .....+.++++ ...|+||..
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 35899999999999999999999887 899999865211 11211100011111 11111222333 357999999
Q ss_pred CCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC----CCcEEEEecC
Q 018618 117 AGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC----PNATVNLISN 159 (353)
Q Consensus 117 ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~----p~a~viv~tN 159 (353)
+|..... ..+ ....+..|+.....+++.+.+.. ..+.++++|.
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 137 (245)
T PRK07060 85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137 (245)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence 8864321 122 22345567776666666665432 2255666553
No 331
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.34 E-value=0.026 Score=52.16 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.+++.|+||+|.+|.+++..|+..|. +|+++|.++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 40 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA 40 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 35899999999999999999999988 899999875
No 332
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=96.33 E-value=0.023 Score=53.27 Aligned_cols=97 Identities=15% Similarity=0.219 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCC-C-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~-~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
++||++||+ |++|..++..|...+ + ..+|+..|+++.+.. ++...- +... ++|..++...+|+||++..
T Consensus 1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~~-g~~~-----~~~~~~~~~~advv~LavK 71 (266)
T COG0345 1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAEY-GVVT-----TTDNQEAVEEADVVFLAVK 71 (266)
T ss_pred CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHHc-CCcc-----cCcHHHHHhhCCEEEEEeC
Confidence 479999999 999999999999888 3 368888887652221 233211 1111 2455688899999999862
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
| +.+.+++..++...++-+||-+.-.+.
T Consensus 72 ----P------------q~~~~vl~~l~~~~~~~lvISiaAGv~ 99 (266)
T COG0345 72 ----P------------QDLEEVLSKLKPLTKDKLVISIAAGVS 99 (266)
T ss_pred ----h------------HhHHHHHHHhhcccCCCEEEEEeCCCC
Confidence 2 236677777776445666665554443
No 333
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.33 E-value=0.039 Score=50.15 Aligned_cols=96 Identities=22% Similarity=0.328 Sum_probs=66.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
+||+|||. |.+|..+.-.+..... +.-+.+||.+..+.. .+...-..+.. +++.+.+.+.|++|.+|+
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~--~~~~~~~~~~~------s~ide~~~~~DlvVEaAS-- 69 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKAK--ELEASVGRRCV------SDIDELIAEVDLVVEAAS-- 69 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHHH--HHHhhcCCCcc------ccHHHHhhccceeeeeCC--
Confidence 68999998 9999999888876643 556788888753322 23322111111 345566799999999985
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
.+.+++++.++-+.+.|.+|+-++--+|
T Consensus 70 --------------~~Av~e~~~~~L~~g~d~iV~SVGALad 97 (255)
T COG1712 70 --------------PEAVREYVPKILKAGIDVIVMSVGALAD 97 (255)
T ss_pred --------------HHHHHHHhHHHHhcCCCEEEEechhccC
Confidence 3458889999888888887776654444
No 334
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.18 Score=45.69 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=31.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.++|.|+||+|.+|.+++..|+..|. +|+++++++
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~ 40 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQ 40 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence 35899999999999999999999887 899999876
No 335
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.32 E-value=0.026 Score=54.99 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=49.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----c----------------HHH--HHHHhcCCCCCeEEEEe
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----T----------------PGV--TADISHMDTGAVVRGFL 98 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~----------------~~~--~~dl~~~~~~~~v~~~~ 98 (353)
.||+|+|+ |.+|+.++..|+..|+ .+|.|+|.+. + +.. +..+........+..+.
T Consensus 25 ~~VlIiG~-GglGs~va~~La~aGv-g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 25 KHVLIVGA-GALGAANAEALVRAGI-GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 48999999 9999999999999986 4899999874 0 111 12233322223444432
Q ss_pred C---CCchhhhhCCCcEEEEcC
Q 018618 99 G---QPQLENALTGMDLVIIPA 117 (353)
Q Consensus 99 ~---t~d~~~al~~ADiVIi~a 117 (353)
. ..+.++.++++|+||.+.
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~ 124 (338)
T PRK12475 103 TDVTVEELEELVKEVDLIIDAT 124 (338)
T ss_pred ccCCHHHHHHHhcCCCEEEEcC
Confidence 1 134567789999999984
No 336
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.31 E-value=0.025 Score=55.68 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=30.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.||+|+|+ |-+|+.++..|+..|. .+|+++|.+.
T Consensus 42 ~~VliiG~-GglG~~v~~~La~~Gv-g~i~ivD~D~ 75 (370)
T PRK05600 42 ARVLVIGA-GGLGCPAMQSLASAGV-GTITLIDDDT 75 (370)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence 39999999 9999999999999886 4899999873
No 337
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.17 Score=45.86 Aligned_cols=156 Identities=16% Similarity=0.130 Sum_probs=79.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCe-EEE-EeCCCchhhhh-------CCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAV-VRG-FLGQPQLENAL-------TGM 110 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~-v~~-~~~t~d~~~al-------~~A 110 (353)
.+.|+||+|.+|++++..|+..|. .+++.+.+. ......++........ +.. .....+.++++ ...
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999887 778877544 1222223332211111 111 11112222333 367
Q ss_pred cEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHhh----C--CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 111 DLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC----C--PNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 111 DiVIi~ag~~~~~----g~~r---~~~~~~N~~i~~~i~~~i~~~----~--p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
|+||.++|..... ..+. ...+..|+.....+.+.+.++ . .++.++++|...... +
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~ 149 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL------------G 149 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC------------C
Confidence 9999998864321 1122 234566766654444443332 1 235566666543211 1
Q ss_pred CCCC-ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPK-KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~-kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.+.. -.++.+......+-..+++.+. +..+++.++
T Consensus 150 ~~~~~~~Y~~sKaa~~~~~~~la~~~~--~~~i~v~~i 185 (248)
T PRK06123 150 SPGEYIDYAASKGAIDTMTIGLAKEVA--AEGIRVNAV 185 (248)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence 1111 1245444334456666777762 344544443
No 338
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.31 E-value=0.032 Score=49.28 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=62.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 121 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~ 121 (353)
|||+||||+|.+|+.++.....+|+ |+.-+=+++.+-.+. ..... ..-..+ ..+.+.+++.+-|+||-+-|.+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~~--~~~~i-~q~Dif-d~~~~a~~l~g~DaVIsA~~~~~ 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAAR--QGVTI-LQKDIF-DLTSLASDLAGHDAVISAFGAGA 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhcccc--cccee-eccccc-ChhhhHhhhcCCceEEEeccCCC
Confidence 7999999999999999999999999 888888776221110 10000 011112 12334578999999999866442
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
++.. ..-.+....+...++.. -...+++++
T Consensus 75 -~~~~-----~~~~k~~~~li~~l~~a-gv~RllVVG 104 (211)
T COG2910 75 -SDND-----ELHSKSIEALIEALKGA-GVPRLLVVG 104 (211)
T ss_pred -CChh-----HHHHHHHHHHHHHHhhc-CCeeEEEEc
Confidence 1211 11122244455555532 345667765
No 339
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.30 E-value=0.023 Score=53.14 Aligned_cols=90 Identities=13% Similarity=0.180 Sum_probs=57.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCC--cEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~--~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.|||+|||+ |.+|++++..|...+.. .+++.+|+++.. + .... ..+..++++++|+||++.-
T Consensus 3 ~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~-------~~~~---~~~~~~~~~~~D~Vilavk 66 (260)
T PTZ00431 3 NIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T-------PFVY---LQSNEELAKTCDIIVLAVK 66 (260)
T ss_pred CCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C-------CeEE---eCChHHHHHhCCEEEEEeC
Confidence 479999998 99999999999887642 358888876411 0 0111 1344567889999999841
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
| ..+.++++.+..+-++..||.+.+-+.
T Consensus 67 -p---------------~~~~~vl~~i~~~l~~~~iIS~~aGi~ 94 (260)
T PTZ00431 67 -P---------------DLAGKVLLEIKPYLGSKLLISICGGLN 94 (260)
T ss_pred -H---------------HHHHHHHHHHHhhccCCEEEEEeCCcc
Confidence 1 124455555554333344555556555
No 340
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=96.29 E-value=0.03 Score=60.06 Aligned_cols=92 Identities=18% Similarity=0.303 Sum_probs=59.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
.||+|||+ |.+|..++..+...|+..+|..+|+++.. ..+.+ .. .... ..+++.+++.++|+||++...
T Consensus 4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~---~g--~~~~---~~~~~~~~~~~aDvVilavp~- 73 (735)
T PRK14806 4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSLELAVS---LG--VIDR---GEEDLAEAVSGADVIVLAVPV- 73 (735)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHH---CC--CCCc---ccCCHHHHhcCCCEEEECCCH-
Confidence 58999998 99999999999988854479999987622 12221 11 1101 124567788999999998531
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 158 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 158 (353)
..+.++++.+..+. ++.+|+.++
T Consensus 74 ---------------~~~~~vl~~l~~~~~~~~ii~d~~ 97 (735)
T PRK14806 74 ---------------LAMEKVLADLKPLLSEHAIVTDVG 97 (735)
T ss_pred ---------------HHHHHHHHHHHHhcCCCcEEEEcC
Confidence 12455555665554 455555444
No 341
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.29 E-value=0.031 Score=55.00 Aligned_cols=56 Identities=25% Similarity=0.260 Sum_probs=43.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.+||+|||.+|.+|..++..|.+.. ..+|..+|..+ . ..++.++++++||+||++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~d----------~----------~~~~~~~~v~~aDlVilav 59 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPAD----------P----------GSLDPATLLQRADVLIFSA 59 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCCc----------c----------ccCCHHHHhcCCCEEEEeC
Confidence 4599999988999999999998752 33889999731 0 1134567889999999984
No 342
>PLN02712 arogenate dehydrogenase
Probab=96.28 E-value=0.027 Score=59.71 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=46.2
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh-CCCcEEEEc
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIP 116 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-~~ADiVIi~ 116 (353)
..+++||+|||. |.+|..++..|...|+ +|..+|.+.....+.++ . +..+ +++++.+ ++||+||++
T Consensus 49 ~~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~~~---G----v~~~---~d~~e~~~~~aDvViLa 115 (667)
T PLN02712 49 NTTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAARSL---G----VSFF---LDPHDLCERHPDVILLC 115 (667)
T ss_pred cCCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHc---C----CEEe---CCHHHHhhcCCCEEEEc
Confidence 344589999998 9999999999998886 89999987422111111 1 1222 3455534 579999998
Q ss_pred C
Q 018618 117 A 117 (353)
Q Consensus 117 a 117 (353)
.
T Consensus 116 v 116 (667)
T PLN02712 116 T 116 (667)
T ss_pred C
Confidence 4
No 343
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.27 E-value=0.046 Score=47.99 Aligned_cols=33 Identities=39% Similarity=0.587 Sum_probs=29.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||+|+|+ |.+|+.++..|+..|. .+++|+|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV-GNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 6899999 9999999999999887 4899999874
No 344
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.26 E-value=0.066 Score=49.08 Aligned_cols=99 Identities=22% Similarity=0.309 Sum_probs=62.7
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCC----cHH-----HHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN----TPG-----VTADISHMDTGAVVRGFLGQPQLENALTG 109 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~----~~~-----~~~dl~~~~~~~~v~~~~~t~d~~~al~~ 109 (353)
+..||.|+|| |.+|..++..|...|. .++|+++|++. .+. ...++.+...... . ..++++++++
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~~ 97 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALKG 97 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHhc
Confidence 4469999999 9999999999988776 23799999983 111 1122222110011 1 1356788999
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
+|++|.+.+ +|+-. .++.+.+ +++.+++..+||..
T Consensus 98 ~dvlIgaT~----~G~~~-----------~~~l~~m---~~~~ivf~lsnP~~ 132 (226)
T cd05311 98 ADVFIGVSR----PGVVK-----------KEMIKKM---AKDPIVFALANPVP 132 (226)
T ss_pred CCEEEeCCC----CCCCC-----------HHHHHhh---CCCCEEEEeCCCCC
Confidence 999999864 34311 1333333 36777777889974
No 345
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.062 Score=49.26 Aligned_cols=113 Identities=19% Similarity=0.177 Sum_probs=64.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhh-------hhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------ALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~-------al~ 108 (353)
+++.|+||+|.+|..++..|+..|. +|++++++. .+....++.... ..+..+. .-+| .++ .+.
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4799999999999999999999988 899999875 222333343321 2222211 1122 112 234
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEec
Q 018618 109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS 158 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t 158 (353)
..|++|..+|..... ..+. ...+..|+.....+.+. +.+....+.+++++
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s 145 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTA 145 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 789999998864311 1222 23345565544444444 43333335555554
No 346
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.25 E-value=0.017 Score=54.19 Aligned_cols=33 Identities=12% Similarity=0.255 Sum_probs=29.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||.|+||+|++|++++..|.+.|. +|..+.++.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~ 33 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSS 33 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCC
Confidence 589999999999999999998887 888888875
No 347
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.24 E-value=0.029 Score=54.61 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.||.|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus 25 ~~VlVvG~-GglGs~va~~La~aGv-g~i~lvD~D~ 58 (339)
T PRK07688 25 KHVLIIGA-GALGTANAEMLVRAGV-GKVTIVDRDY 58 (339)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCc
Confidence 39999999 9999999999999987 4999999874
No 348
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.23 E-value=0.029 Score=51.40 Aligned_cols=34 Identities=32% Similarity=0.476 Sum_probs=30.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus 22 ~~VlivG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 55 (228)
T cd00757 22 ARVLVVGA-GGLGSPAAEYLAAAGV-GKLGLVDDDV 55 (228)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 49999999 9999999999999986 4999999764
No 349
>PLN03139 formate dehydrogenase; Provisional
Probab=96.20 E-value=0.03 Score=55.42 Aligned_cols=100 Identities=21% Similarity=0.200 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
..++|+|+|. |.||+.++..|..-|. +|+.+|......... .+. .+.. ..++++.+++||+|++....
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~~----g~~~---~~~l~ell~~sDvV~l~lPl 265 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KET----GAKF---EEDLDAMLPKCDVVVINTPL 265 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hhc----Ccee---cCCHHHHHhhCCEEEEeCCC
Confidence 4569999998 9999999999987776 899999864211111 111 1111 13678899999999997421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST 164 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~ 164 (353)
. ..+-.++. .+.+....|++++|+.+ ..+|.-
T Consensus 266 t-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe~ 299 (386)
T PLN03139 266 T-----------EKTRGMFN--KERIAKMKKGVLIVNNARGAIMDTQ 299 (386)
T ss_pred C-----------HHHHHHhC--HHHHhhCCCCeEEEECCCCchhhHH
Confidence 1 11222221 23444445889999886 445533
No 350
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.20 E-value=0.014 Score=52.97 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=58.4
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE--EeCCCchhhhhCCCcEEEEcCCCCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPAGVPR 121 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~--~~~t~d~~~al~~ADiVIi~ag~~~ 121 (353)
|+|+||+|.+|+.++..|...+. +|..+=++........+.+.. ..+.. +.....+.++|+|+|.|+++.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALG--AEVVEADYDDPESLVAALKGVDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTT--TEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhccc--ceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence 78999999999999999998776 777777665333344455432 22211 1111355678999999999865332
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618 122 KPGMTRDDLFNINAGIVRTLCEGIAKCC 149 (353)
Q Consensus 122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~ 149 (353)
..+ .+....+++...+.+
T Consensus 77 ---~~~-------~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 77 ---PSE-------LEQQKNLIDAAKAAG 94 (233)
T ss_dssp ---CCH-------HHHHHHHHHHHHHHT
T ss_pred ---hhh-------hhhhhhHHHhhhccc
Confidence 111 333456666766665
No 351
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.20 E-value=0.1 Score=47.18 Aligned_cols=114 Identities=14% Similarity=0.150 Sum_probs=63.7
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhh-------hCC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-QPQ---LENA-------LTG 109 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l~~ 109 (353)
|.|+||+|.+|.+++..|++.|. ++++++... ......++.+.. ..+..+.. -+| .+++ +..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA 76 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999988 888887643 222233343321 22222211 112 1222 234
Q ss_pred CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCC
Q 018618 110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPV 161 (353)
Q Consensus 110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv 161 (353)
-|.+|..+|..... ..+ ....+..|+.....+.+.+ .+..+.+.++++|...
T Consensus 77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS 138 (239)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence 58899988864322 122 3345666766555554433 2223456666666543
No 352
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.20 E-value=0.028 Score=53.04 Aligned_cols=101 Identities=22% Similarity=0.280 Sum_probs=70.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhC----CC-----CcEEEEEeCCC--cH------HHHHHHhcCCCCCeEEEEeCCCch
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKIN----PL-----VSVLHLYDVVN--TP------GVTADISHMDTGAVVRGFLGQPQL 103 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~----~~-----~~el~L~D~~~--~~------~~~~dl~~~~~~~~v~~~~~t~d~ 103 (353)
..||.|.|| |..|..++.+|... |+ ...++++|.+. .+ .....+.+.. .. . ...++
T Consensus 25 d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~-~~--~---~~~~L 97 (279)
T cd05312 25 DQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD-EE--K---EGKSL 97 (279)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc-Cc--c---cCCCH
Confidence 469999999 99999999877654 65 26899999875 11 1112222211 11 1 12578
Q ss_pred hhhhC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 104 ENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 104 ~~al~--~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
+++++ ++|++|=+.+.+ |. +.+++.+.|.+++++.+|+-.|||..
T Consensus 98 ~e~i~~v~ptvlIG~S~~~---g~-----------ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 98 LEVVKAVKPTVLIGLSGVG---GA-----------FTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred HHHHHhcCCCEEEEeCCCC---CC-----------CCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 99999 999988775433 21 13578889999999999999999986
No 353
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=96.19 E-value=0.058 Score=51.61 Aligned_cols=105 Identities=19% Similarity=0.142 Sum_probs=68.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cH--HHHHHHhcCCCCCeEEEEeCC-Cc---hhhhh--CC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TP--GVTADISHMDTGAVVRGFLGQ-PQ---LENAL--TG 109 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~--~~~~dl~~~~~~~~v~~~~~t-~d---~~~al--~~ 109 (353)
..+|.|+||+|++|+|.+..|...|+ +++.+|... .. ..+..+.+. ...+.+.... .| +++-| ..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D~~~L~kvF~~~~ 77 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLNDAEALEKLFSEVK 77 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCCHHHHHHHHhhcC
Confidence 35899999999999999999999999 999999755 11 122333332 1233332111 12 22222 34
Q ss_pred CcEEEEcCCCCC-CCC-CCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618 110 MDLVIIPAGVPR-KPG-MTRDDLFNINAGIVRTLCEGIAKCC 149 (353)
Q Consensus 110 ADiVIi~ag~~~-~~g-~~r~~~~~~N~~i~~~i~~~i~~~~ 149 (353)
-|-|++.|+... .+. +.+..+...|+-....+.+.+++++
T Consensus 78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~ 119 (343)
T KOG1371|consen 78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN 119 (343)
T ss_pred CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC
Confidence 677888876542 122 2346677889999999999999987
No 354
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.18 E-value=0.031 Score=51.77 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus 25 ~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 58 (240)
T TIGR02355 25 SRVLIVGL-GGLGCAASQYLAAAGV-GNLTLLDFDT 58 (240)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCc
Confidence 39999999 9999999999999986 4999999875
No 355
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.17 E-value=0.067 Score=52.52 Aligned_cols=113 Identities=19% Similarity=0.235 Sum_probs=70.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH------HHH------HH--HhcCCCCCeEEEEeCCCchhhhh
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP------GVT------AD--ISHMDTGAVVRGFLGQPQLENAL 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~------~~~------~d--l~~~~~~~~v~~~~~t~d~~~al 107 (353)
++|+|+|- |+||..+|..++..|. .++-+|+++.. |.. .| +........++. |+|. +.+
T Consensus 10 ~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lra---Ttd~-~~l 82 (436)
T COG0677 10 ATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRA---TTDP-EEL 82 (436)
T ss_pred eEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceE---ecCh-hhc
Confidence 69999998 9999999999999998 99999998711 100 00 111111234554 4676 557
Q ss_pred CCCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEE-EEecCCCCchhHHH
Q 018618 108 TGMDLVIIPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCC-PNATV-NLISNPVNSTVPIA 168 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~v-iv~tNPv~~~t~~~ 168 (353)
+.||++|++.-.|.+. .+..+.+ +.+-++.|.++- +...| +=.|-|....-.++
T Consensus 83 ~~~dv~iI~VPTPl~~~~~pDls~-------v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~ 139 (436)
T COG0677 83 KECDVFIICVPTPLKKYREPDLSY-------VESAARSIAPVLKKGDLVILESTTPPGTTEEVV 139 (436)
T ss_pred ccCCEEEEEecCCcCCCCCCChHH-------HHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHH
Confidence 8999999997766433 2223333 444555555554 33333 33467776554443
No 356
>PRK08324 short chain dehydrogenase; Validated
Probab=96.17 E-value=0.071 Score=56.73 Aligned_cols=114 Identities=20% Similarity=0.268 Sum_probs=64.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
.++|.|+||+|.+|+.++..|+..|. +|+++|++. .......+... ..+..+. .-+| .++++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999887 899999876 22222223321 1111110 1122 22223
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHHhhCCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN 159 (353)
.+.|+||.++|..... ..+. ...+..|......+ .+.+++....+.+++++.
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS 558 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIAS 558 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 3689999999864321 1122 22344555544444 444444333355665553
No 357
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.061 Score=49.45 Aligned_cols=112 Identities=14% Similarity=0.145 Sum_probs=64.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
+++.|+||+|.+|.+++..|.+.|. ++++.+.+. .......+.+.. ..+..+. .-+| ..+++
T Consensus 10 k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 10 RAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRALG--RRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999998887 787777643 222222232211 2222221 1122 22223
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEe
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLI 157 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~ 157 (353)
...|+||..+|..... ..+ ....+..|+.....+.+.+..+. ..+.++++
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 144 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNM 144 (258)
T ss_pred CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 3469999999853221 122 23456677766666666655543 23455544
No 358
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.17 E-value=0.019 Score=48.00 Aligned_cols=74 Identities=22% Similarity=0.315 Sum_probs=48.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-------------------HH--HHHHHhcCCCCCeEEEEeC-
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-------------------PG--VTADISHMDTGAVVRGFLG- 99 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-------------------~~--~~~dl~~~~~~~~v~~~~~- 99 (353)
.||+|+|+ |.+|+.++..|+..|. .++.|+|.+.. +. ....+........++.+..
T Consensus 3 ~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 3 KRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp -EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 49999999 9999999999999887 59999998640 11 1122332222344554321
Q ss_pred --CCchhhhhCCCcEEEEcC
Q 018618 100 --QPQLENALTGMDLVIIPA 117 (353)
Q Consensus 100 --t~d~~~al~~ADiVIi~a 117 (353)
..+.++.++++|+||.+.
T Consensus 81 ~~~~~~~~~~~~~d~vi~~~ 100 (135)
T PF00899_consen 81 IDEENIEELLKDYDIVIDCV 100 (135)
T ss_dssp CSHHHHHHHHHTSSEEEEES
T ss_pred cccccccccccCCCEEEEec
Confidence 123446678999999874
No 359
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.09 Score=48.55 Aligned_cols=115 Identities=14% Similarity=0.130 Sum_probs=64.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe----CCCchhhhh-----
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL----GQPQLENAL----- 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~----~t~d~~~al----- 107 (353)
+++|.|+||+|.+|.+++..|++.| . .|++++++.. .....++.... ...+..+. ...+.++.+
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh
Confidence 3589999999999999999988874 6 8899998752 22334444321 11222211 111211112
Q ss_pred -CCCcEEEEcCCCCCCCCC---CH---HHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecC
Q 018618 108 -TGMDLVIIPAGVPRKPGM---TR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 108 -~~ADiVIi~ag~~~~~g~---~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 159 (353)
.+.|++|..+|....... +. .+.+..|+... +.+.+.+.+... +.++++|.
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~-~~iv~isS 146 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF-GQIIAMSS 146 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC-ceEEEEec
Confidence 379999998876432111 11 12356665433 456666665543 45555543
No 360
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.16 E-value=0.36 Score=44.43 Aligned_cols=147 Identities=14% Similarity=0.203 Sum_probs=76.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---h-------hh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NA 106 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~a 106 (353)
.+++.|+||++.+|.+++..|++.|. +|++.+.+. ......++.... ...+..+. .-+|. + +.
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGV--NIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDED 84 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 35899999999999999999999987 788876433 222333343211 11222211 11221 1 12
Q ss_pred hCCCcEEEEcCCCCCC-------C--CCCH---HHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHH
Q 018618 107 LTGMDLVIIPAGVPRK-------P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~-------~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~ 170 (353)
+...|++|..+|.... + ..+. ...+..|+. ..+.+.+.+++. +.+.|+++|......
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------ 157 (260)
T PRK08416 85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLV------ 157 (260)
T ss_pred cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecccccc------
Confidence 3468999999874211 1 0111 122333433 334455555432 345566665433211
Q ss_pred HHHHhCCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618 171 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 171 ~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
..|..-.++.+......+-+.+++.++
T Consensus 158 ------~~~~~~~Y~asK~a~~~~~~~la~el~ 184 (260)
T PRK08416 158 ------YIENYAGHGTSKAAVETMVKYAATELG 184 (260)
T ss_pred ------CCCCcccchhhHHHHHHHHHHHHHHhh
Confidence 112222355555555567777777764
No 361
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=96.16 E-value=0.019 Score=58.27 Aligned_cols=98 Identities=13% Similarity=0.194 Sum_probs=58.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC-CCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 121 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~-~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~ 121 (353)
+|+|||. |.+|.++|..|+..|+ +|+++|+++.+ +.++... .....+.......++.++++++|+|++...
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~--- 72 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVK--- 72 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECC---
Confidence 4899999 9999999999999998 99999987622 2223221 101112222111233334567998888742
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCC
Q 018618 122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP 160 (353)
Q Consensus 122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP 160 (353)
++ +.+.++.+.+..+- ++.+||..||-
T Consensus 73 -~~-----------~~v~~Vi~~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 73 -AG-----------APVDAVINQLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred -Cc-----------HHHHHHHHHHHhhCCCCCEEEECCCc
Confidence 11 11333444554443 67778888763
No 362
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.14 E-value=0.014 Score=54.34 Aligned_cols=107 Identities=21% Similarity=0.272 Sum_probs=71.8
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhC----CCC-----cEEEEEeCCC--cH------HHHHHHhcCCCCCeEEEEeCCCc
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TP------GVTADISHMDTGAVVRGFLGQPQ 102 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~----~~~-----~el~L~D~~~--~~------~~~~dl~~~~~~~~v~~~~~t~d 102 (353)
+..||.+.|| |..|..++.+|... |+- ..++|+|.+. .. .....+.+... .... ..+
T Consensus 24 ~d~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~--~~~~---~~~ 97 (255)
T PF03949_consen 24 SDQRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN--PEKD---WGS 97 (255)
T ss_dssp GG-EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS--TTT-----SS
T ss_pred HHcEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc--cccc---ccC
Confidence 3469999999 99999999877655 773 7899999875 11 12223333221 1111 147
Q ss_pred hhhhhCCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC--chhH
Q 018618 103 LENALTGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVP 166 (353)
Q Consensus 103 ~~~al~~A--DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~ 166 (353)
+.++++++ |++|=+.+.+ |. ..+++.+.|.+++++.+|+=.|||.. -.++
T Consensus 98 L~eav~~~kPtvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~p 151 (255)
T PF03949_consen 98 LLEAVKGAKPTVLIGLSGQG---GA-----------FTEEVVRAMAKHNERPIIFPLSNPTPKAECTP 151 (255)
T ss_dssp HHHHHHCH--SEEEECSSST---TS-----------S-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-H
T ss_pred HHHHHHhcCCCEEEEecCCC---Cc-----------CCHHHHHHHhccCCCCEEEECCCCCCcccCCH
Confidence 89999999 9998876643 21 24688899999999999999999987 5554
No 363
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.072 Score=47.97 Aligned_cols=34 Identities=18% Similarity=0.073 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+++.|+||+|.+|+.++..|+..|. +|+++|++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence 4799999999999999999999887 999999876
No 364
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.14 E-value=0.031 Score=53.30 Aligned_cols=76 Identities=21% Similarity=0.324 Sum_probs=57.0
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
.++|+|||.+|.||..++..|...|. +|.+++.+. .++++..+.||+||...|.+
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsavg~~ 213 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAVGRP 213 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecCCh
Confidence 46999999966999999999998887 888887532 24678889999999998765
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCC
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV 161 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv 161 (353)
..-. .++ ..|+++||-++ |++
T Consensus 214 ~~v~---~~~-----------------ik~GaiVIDvgin~~ 235 (301)
T PRK14194 214 RLID---ADW-----------------LKPGAVVIDVGINRI 235 (301)
T ss_pred hccc---Hhh-----------------ccCCcEEEEeccccc
Confidence 3111 111 34888988887 654
No 365
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.13 E-value=0.05 Score=45.82 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=29.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||.|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCCC
Confidence 6899999 9999999999999987 4899999874
No 366
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.11 E-value=0.015 Score=53.69 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+++.|+||+|.+|..++..|++.|. ++++.|.++
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~ 43 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHG 43 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 4789999999999999999999998 899999875
No 367
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.16 Score=53.37 Aligned_cols=114 Identities=17% Similarity=0.174 Sum_probs=65.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCC---chhhhhC------
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------ 108 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al~------ 108 (353)
.+++.|+||+|.+|..++..|+..|. +|++++.++ ......++.... ..+..+. .-+ +.+++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999999987 899999876 222333333211 1222211 112 2223333
Q ss_pred -CCcEEEEcCCCCCCCC--------CCHHHHHHHHHHHHHHH----HHHHHhhCCCcEEEEecC
Q 018618 109 -GMDLVIIPAGVPRKPG--------MTRDDLFNINAGIVRTL----CEGIAKCCPNATVNLISN 159 (353)
Q Consensus 109 -~ADiVIi~ag~~~~~g--------~~r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN 159 (353)
..|++|..+|...... .+....+..|+.....+ .+.+++. ..+.++++|.
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS 509 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSS 509 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECC
Confidence 6899999998642111 11223455666554444 4444433 3455666653
No 368
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.19 Score=45.98 Aligned_cols=114 Identities=11% Similarity=0.107 Sum_probs=66.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 108 (353)
+++.|+||+|.+|.+++..|++.|. .|+++|.+. ......++.... ..+..+. .-+| .+++ +.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999888 899999876 233333343221 1222211 1122 2221 24
Q ss_pred CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIA----KCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN 159 (353)
..|++|..+|.... + ..+. ...+..|+.....+.+.+. +....+.++++|.
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS 138 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVA 138 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 67999999874321 1 2222 3345666655555555543 3333466776663
No 369
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.09 E-value=0.028 Score=53.21 Aligned_cols=69 Identities=26% Similarity=0.330 Sum_probs=42.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHH-HHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~-~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.++|+|+|. |.+|..++..|...|+ .+..++.+...+. .....-.. +.-. ......++..+||+||++.
T Consensus 3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv----~d~~-~~~~~~~~~~~aD~Vivav 72 (279)
T COG0287 3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGV----IDEL-TVAGLAEAAAEADLVIVAV 72 (279)
T ss_pred CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCc----cccc-ccchhhhhcccCCEEEEec
Confidence 469999998 9999999999999998 5555555442111 11111000 0000 0111246788999999984
No 370
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.08 E-value=0.099 Score=47.97 Aligned_cols=114 Identities=14% Similarity=0.194 Sum_probs=63.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL 112 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADi 112 (353)
.+++.|+||+|.+|..++..|++.|. ++++.+.+.. ....++.+... ..+.. .....+.+++ +...|+
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGV-FTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35899999999999999999999987 7888765431 11222322111 01110 1011122222 236799
Q ss_pred EEEcCCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618 113 VIIPAGVPRK-P--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 113 VIi~ag~~~~-~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 159 (353)
||..+|.... + ..+. ...+..|+.. .+.+.+.+++. ..+.||++|.
T Consensus 83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS 138 (255)
T PRK06463 83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIAS 138 (255)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 9999886431 1 1222 2334556554 56666666543 3455666554
No 371
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.07 E-value=0.04 Score=51.73 Aligned_cols=68 Identities=19% Similarity=0.327 Sum_probs=44.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+|||+|||. |.+|..++..+...+ ...-+.++|.+... +.++... .. ...+ +|+++.+.++|+|++++
T Consensus 1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~-~~--~~~~---~~~~ell~~~DvVvi~a 69 (265)
T PRK13304 1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASK-TG--AKAC---LSIDELVEDVDLVVECA 69 (265)
T ss_pred CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHh-cC--CeeE---CCHHHHhcCCCEEEEcC
Confidence 479999998 999999998887754 22235678876521 2222221 11 1222 46667679999999986
No 372
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.05 E-value=0.12 Score=46.64 Aligned_cols=113 Identities=18% Similarity=0.134 Sum_probs=63.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEeC-CCc---hhhh-------h
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLG-QPQ---LENA-------L 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l 107 (353)
.++.|+|++|.+|++++..|.+.|. .+++.|.+.. ......+... ...+..+.. -+| .+++ +
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSGNDCAKDWFEEYGFT--EDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhhcc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999998886 8999998742 1111111111 122322211 122 2222 2
Q ss_pred CCCcEEEEcCCCCCC---CCCC---HHHHHHHHHHHHHHHH----HHHHhhCCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRK---PGMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~---~g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN 159 (353)
...|++|..+|.... ...+ ....+..|+.....+. +.+++. +.+.++++|.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss 139 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISS 139 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECC
Confidence 358999999886421 1112 2234456666655554 444433 3456666664
No 373
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.05 E-value=0.056 Score=49.06 Aligned_cols=32 Identities=38% Similarity=0.575 Sum_probs=29.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 76 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~ 76 (353)
||+|+|+ |.+|+.++..|+..|. .++.++|.+
T Consensus 30 ~V~ViG~-GglGs~ia~~La~~Gv-g~i~lvD~D 61 (212)
T PRK08644 30 KVGIAGA-GGLGSNIAVALARSGV-GNLKLVDFD 61 (212)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence 8999999 9999999999999987 489999987
No 374
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.05 E-value=0.042 Score=49.32 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=30.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus 20 s~VlviG~-gglGsevak~L~~~GV-g~i~lvD~d~ 53 (198)
T cd01485 20 AKVLIIGA-GALGAEIAKNLVLAGI-DSITIVDHRL 53 (198)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 49999999 7899999999999987 4899999763
No 375
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.03 E-value=0.029 Score=54.40 Aligned_cols=63 Identities=25% Similarity=0.382 Sum_probs=45.1
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..++|+|||. |.+|+.+|..|+. .|. +|+.+|....... .. .+.. .+++++++++||+|++..
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~~~g~--~V~~~d~~~~~~~----~~-----~~~~---~~~l~ell~~aDvIvl~l 208 (332)
T PRK08605 145 KDLKVAVIGT-GRIGLAVAKIFAKGYGS--DVVAYDPFPNAKA----AT-----YVDY---KDTIEEAVEGADIVTLHM 208 (332)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCccHhH----Hh-----hccc---cCCHHHHHHhCCEEEEeC
Confidence 3569999999 9999999998843 344 8999997652211 11 0111 246788999999999985
No 376
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.02 E-value=0.36 Score=43.44 Aligned_cols=148 Identities=15% Similarity=0.086 Sum_probs=79.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCc----hhhhhCCCcEEEEc
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMDLVIIP 116 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d----~~~al~~ADiVIi~ 116 (353)
+++.|+||+|.+|.+++..|++.|. +++++|++.... . ...+..+.. -++ ..+.+...|+||..
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~-----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ 74 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----L-----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNT 74 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----c-----CCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence 4799999999999999999999887 899999865210 0 011222110 011 12234678999999
Q ss_pred CCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618 117 AGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 117 ag~~~--~~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~ 186 (353)
+|... .+ ..+. ...+..|+.....+.+.+... .+.+.+++++...... +.+..-.++.
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~~~~Y~~ 142 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV------------AGGGGAAYTA 142 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc------------CCCCCcccHH
Confidence 88532 11 1222 234566766555555554432 2334555554322111 1222233454
Q ss_pred chhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 187 TMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 187 t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
+......+.+.+|+.++ +..+++.++
T Consensus 143 sK~a~~~~~~~la~~~~--~~gi~v~~v 168 (235)
T PRK06550 143 SKHALAGFTKQLALDYA--KDGIQVFGI 168 (235)
T ss_pred HHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence 43333345566777663 344544443
No 377
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.02 E-value=0.023 Score=47.01 Aligned_cols=72 Identities=24% Similarity=0.308 Sum_probs=44.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHH-HHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~-~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||+|+|++|.+|+.++..+.+.+-..=+..+|.+. ..|. .-++.... ...+.. ++|+++.++.+|+||-..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~-~~~~~v---~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG-PLGVPV---TDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS-T-SSBE---BS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC-Cccccc---chhHHHhcccCCEEEEcC
Confidence 699999999999999999998854332245667654 1111 11222211 122332 367889999999988863
No 378
>PRK08223 hypothetical protein; Validated
Probab=96.01 E-value=0.03 Score=53.06 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||.|+|+ |-+|+.++..|+..|+. +|.|+|-+.
T Consensus 29 ~VlIvG~-GGLGs~va~~LA~aGVG-~i~lvD~D~ 61 (287)
T PRK08223 29 RVAIAGL-GGVGGIHLLTLARLGIG-KFTIADFDV 61 (287)
T ss_pred CEEEECC-CHHHHHHHHHHHHhCCC-eEEEEeCCC
Confidence 9999999 99999999999999974 899999874
No 379
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.086 Score=48.41 Aligned_cols=113 Identities=19% Similarity=0.246 Sum_probs=63.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 107 (353)
+++.|+||+|.+|.+++..|++.|. ++++.|.+. ......++.+.. ..+..+. .-+| .++++
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRTDDGLAETAEHIEAAG--RRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999987 899999865 222333344321 1221111 1112 22222
Q ss_pred CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tN 159 (353)
..-|++|..+|...... .+ ....+..|+.....+.+ .+.+. ..+.++++|.
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS 145 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIAS 145 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECc
Confidence 34599999998643211 12 22334556555544444 34322 3355665543
No 380
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.00 E-value=0.041 Score=52.51 Aligned_cols=69 Identities=17% Similarity=0.150 Sum_probs=48.7
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
.....||+|+|+ |.+|..++..|...|. +|..+|++. ....+. ... .... ...++.+.++++|+||.+
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~---~~G--~~~~---~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARIT---EMG--LSPF---HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHH---HcC--Ceee---cHHHHHHHhCCCCEEEEC
Confidence 335679999999 9999999999998886 999999875 222222 111 1111 113566788999999998
Q ss_pred C
Q 018618 117 A 117 (353)
Q Consensus 117 a 117 (353)
.
T Consensus 218 ~ 218 (296)
T PRK08306 218 I 218 (296)
T ss_pred C
Confidence 5
No 381
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.00 E-value=0.027 Score=53.59 Aligned_cols=96 Identities=20% Similarity=0.216 Sum_probs=60.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
..+|+|+|+ |.+|..++..|...|. +|.++|++..+. ..+.... . ..+ ...++.+.++++|+||.+....
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g--~--~~~-~~~~l~~~l~~aDiVint~P~~ 220 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMG--L--IPF-PLNKLEEKVAEIDIVINTIPAL 220 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCC--C--eee-cHHHHHHHhccCCEEEECCChH
Confidence 459999999 9999999999998886 899999875211 1111111 1 111 1135667889999999985211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCch
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNST 164 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~ 164 (353)
++ + .+ .+....|++++|.++ +|-.+-
T Consensus 221 ---------ii--~----~~---~l~~~k~~aliIDlas~Pg~td 247 (287)
T TIGR02853 221 ---------VL--T----AD---VLSKLPKHAVIIDLASKPGGTD 247 (287)
T ss_pred ---------Hh--C----HH---HHhcCCCCeEEEEeCcCCCCCC
Confidence 11 1 11 223334678888775 886643
No 382
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.98 E-value=0.065 Score=48.38 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.+|.|+||+|.+|+.++..|++.|. +|++++.++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~ 39 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE 39 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4899999999999999999999888 999999876
No 383
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.27 Score=45.79 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=57.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh-------hC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA-------LT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a-------l~ 108 (353)
+.+.|+||+|.+|.+++..|+..|. +|++++.+. ......++... ...+..+. .-+|.+ ++ +.
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGF--PVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3799999999999999999999987 888888765 22122222221 12222211 112322 11 23
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH
Q 018618 109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI 145 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i 145 (353)
..|+||..+|..... ..+ ....+..|+.....+.+.+
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 129 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAV 129 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 679999998864211 111 2233456666555555544
No 384
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=95.95 E-value=0.031 Score=53.22 Aligned_cols=77 Identities=22% Similarity=0.371 Sum_probs=48.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHH-----------HHH-hcCCCCCeEEEEeCCCchhhh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVT-----------ADI-SHMDTGAVVRGFLGQPQLENA 106 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~-----------~dl-~~~~~~~~v~~~~~t~d~~~a 106 (353)
++||+-||| |+||.....-++..=.-.++.++|++..+ +.- .|. .++. +..+ ++ ++|.+.+
T Consensus 1 ~~kicciga-gyvggptcavia~kcp~i~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~cr-gknl-ff--stdieka 75 (481)
T KOG2666|consen 1 MVKICCIGA-GYVGGPTCAVIALKCPDIEVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCR-GKNL-FF--STDIEKA 75 (481)
T ss_pred CceEEEecC-cccCCcchheeeecCCceEEEEEecCchHhhcccCCCCcccCCCHHHHHHHhc-CCce-ee--ecchHHH
Confidence 369999999 99987766544443222399999997611 100 111 1111 1222 23 4789999
Q ss_pred hCCCcEEEEcCCCCCC
Q 018618 107 LTGMDLVIIPAGVPRK 122 (353)
Q Consensus 107 l~~ADiVIi~ag~~~~ 122 (353)
++.||+|++....|.+
T Consensus 76 i~eadlvfisvntptk 91 (481)
T KOG2666|consen 76 IKEADLVFISVNTPTK 91 (481)
T ss_pred hhhcceEEEEecCCcc
Confidence 9999999998766643
No 385
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.94 E-value=0.19 Score=45.55 Aligned_cols=114 Identities=14% Similarity=0.091 Sum_probs=61.2
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CC--cHHHHHHHhcCCCCCeEEEE-eCCCc---hhhh-------h
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L 107 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~--~~~~~~dl~~~~~~~~v~~~-~~t~d---~~~a-------l 107 (353)
+.+.|+||+|.+|..++..|++.|. ++++... +. ......++.... ..+..+ ..-+| .+++ +
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALG--FDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999987 7777543 22 111222332211 112111 11122 2222 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
...|+||.++|..... ..+ ....+..|......+.+.+... .+.+.++++|.
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS 140 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS 140 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence 4689999999865321 112 2334566766544444443322 23345666554
No 386
>PLN02928 oxidoreductase family protein
Probab=95.94 E-value=0.03 Score=54.65 Aligned_cols=102 Identities=24% Similarity=0.189 Sum_probs=60.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHH--hcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADI--SHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl--~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.++|+|+|. |.+|+.+|..+..-|. +|+.+|+.........+ ................++++.++.||+|++...
T Consensus 159 gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 159 GKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 469999999 9999999999987776 99999986311111111 000000000000012468899999999999752
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
.. + .+-.++. .+.+...-|++++|+++
T Consensus 236 lt--~---------~T~~li~--~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 236 LT--K---------ETAGIVN--DEFLSSMKKGALLVNIA 262 (347)
T ss_pred CC--h---------HhhcccC--HHHHhcCCCCeEEEECC
Confidence 11 1 1111121 23444445789999987
No 387
>PLN02503 fatty acyl-CoA reductase 2
Probab=95.94 E-value=0.098 Score=54.79 Aligned_cols=109 Identities=17% Similarity=0.077 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCC--c--HHHH-HHHhc-----------CC-----CCCeEEEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN--T--PGVT-ADISH-----------MD-----TGAVVRGF 97 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~--~--~~~~-~dl~~-----------~~-----~~~~v~~~ 97 (353)
+.++|.|+||+|++|..++..|+..+ -..+|.++.+.. . .... .++.+ .. ...++..+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 46799999999999999999888654 356788887643 1 1111 11111 00 01233332
Q ss_pred eCC----------CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618 98 LGQ----------PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC 149 (353)
Q Consensus 98 ~~t----------~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~ 149 (353)
.+. .+++...++.|+||++|+... ...+.......|+....++++.+.+..
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~ 258 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCK 258 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 211 123334477999999987543 234456677889999999999887653
No 388
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=95.94 E-value=0.071 Score=51.19 Aligned_cols=66 Identities=15% Similarity=0.186 Sum_probs=45.2
Q ss_pred CeEEEEcCCCC--------------------cHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe
Q 018618 42 FKVAILGAAGG--------------------IGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL 98 (353)
Q Consensus 42 ~KI~IiGa~G~--------------------vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~ 98 (353)
|||+|-|| |+ -|+.+|..|+..|+ +|+++|++.. ......+.+.. ...
T Consensus 1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaG----A~~-- 71 (341)
T TIGR01724 1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAG----VKV-- 71 (341)
T ss_pred CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCC----Cee--
Confidence 67888887 64 37888888888898 9999998752 22233344332 111
Q ss_pred CCCchhhhhCCCcEEEEcC
Q 018618 99 GQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 99 ~t~d~~~al~~ADiVIi~a 117 (353)
.++..++.++||+||+..
T Consensus 72 -AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 72 -VSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred -cCCHHHHHhCCCEEEEec
Confidence 234578999999999983
No 389
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.24 Score=45.56 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=64.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh----------hhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~----------~al~ 108 (353)
+.+.|+||+|.+|..++..|+..|. +|++++++. ......++........+..+. .-+|.+ +.+.
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999988 899999876 233333343221112222211 112321 1234
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHHhhCCCcEEEEecC
Q 018618 109 GMDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN 159 (353)
..|++|..+|..... ..+. ...+..| ....+.+.+.+++. ..+.|+++|.
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS 146 (265)
T PRK07062 87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNS 146 (265)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecc
Confidence 679999999864211 1122 2223334 33455555555543 2356666554
No 390
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.16 Score=48.11 Aligned_cols=114 Identities=22% Similarity=0.250 Sum_probs=66.0
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCch---hh-------hh
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---EN-------AL 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~---~~-------al 107 (353)
.+++.|+||+|.+|..++..|+..|. +|++++++. +...+.++.. ...+..+ ..-+|. ++ .+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 34899999999999999999999997 899999876 2223333322 1111110 111222 11 23
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618 108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 159 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 159 (353)
...|+||..+|..... ..+ ....+..|+.....+++.+..+- ..+.++++|.
T Consensus 84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 5679999999864211 112 22345567665555555544321 2455666553
No 391
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.90 E-value=0.068 Score=48.56 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
..++.|+|++|.+|..++..|+..|. .++++|.+.
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~ 39 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ 39 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 34899999999999999999998887 899999876
No 392
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.90 E-value=0.051 Score=51.20 Aligned_cols=70 Identities=24% Similarity=0.205 Sum_probs=45.4
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhC--CCCcEEE-EEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEE
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKIN--PLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 115 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~--~~~~el~-L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi 115 (353)
.+++||+|||. |.+|..++..|... +. +|+ ++|.+..+ +.++.... ..... .+++++.+.++|+|++
T Consensus 4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~--el~aV~dr~~~~--a~~~a~~~--g~~~~---~~~~eell~~~D~Vvi 73 (271)
T PRK13302 4 RPELRVAIAGL-GAIGKAIAQALDRGLPGL--TLSAVAVRDPQR--HADFIWGL--RRPPP---VVPLDQLATHADIVVE 73 (271)
T ss_pred CCeeEEEEECc-cHHHHHHHHHHHhcCCCe--EEEEEECCCHHH--HHHHHHhc--CCCcc---cCCHHHHhcCCCEEEE
Confidence 34579999999 99999999888764 33 655 77876522 22222110 00111 1456777899999999
Q ss_pred cCC
Q 018618 116 PAG 118 (353)
Q Consensus 116 ~ag 118 (353)
++.
T Consensus 74 ~tp 76 (271)
T PRK13302 74 AAP 76 (271)
T ss_pred CCC
Confidence 864
No 393
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.89 E-value=0.1 Score=46.96 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=46.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.+||.|||+ |.+|...+..|...|. +|++++.+.... ..++.+.. .+.......+ ++.+.++|+||.+.+
T Consensus 10 ~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~~-l~~l~~~~---~i~~~~~~~~-~~~l~~adlViaaT~ 79 (202)
T PRK06718 10 NKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTEN-LVKLVEEG---KIRWKQKEFE-PSDIVDAFLVIAATN 79 (202)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCHH-HHHHHhCC---CEEEEecCCC-hhhcCCceEEEEcCC
Confidence 359999999 9999999999988886 899998643222 22333221 1222111122 356899999988754
No 394
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.88 E-value=0.11 Score=48.77 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=30.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.+|+|+|+ |.||+.++..|+..|. .+|.|+|.+.
T Consensus 31 s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D~ 64 (268)
T PRK15116 31 AHICVVGI-GGVGSWAAEALARTGI-GAITLIDMDD 64 (268)
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence 38999999 9999999999999986 3899999764
No 395
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.062 Score=47.43 Aligned_cols=101 Identities=20% Similarity=0.203 Sum_probs=58.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhh---hhCCCcEEEEcCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLEN---ALTGMDLVIIPAG 118 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~---al~~ADiVIi~ag 118 (353)
|++.|+||+|.+|..++..|.+. . +|++++++.. ....|+.+. .+.++ .+...|++|..+|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~--~vi~~~r~~~-~~~~D~~~~------------~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H--EVITAGRSSG-DVQVDITDP------------ASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C--cEEEEecCCC-ceEecCCCh------------HHHHHHHHhcCCCCEEEECCC
Confidence 58999999999999999999877 4 8899887541 011122211 11112 2346899999988
Q ss_pred CCCC-C--CCCHHH---HHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618 119 VPRK-P--GMTRDD---LFNINAGIVRTLCEGIAKCC-PNATVNLIS 158 (353)
Q Consensus 119 ~~~~-~--g~~r~~---~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 158 (353)
.... + ..+..+ .+..|+.....+.+....+- +.+.++++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 5421 1 123222 34456555555555444332 345555554
No 396
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.84 E-value=0.19 Score=47.77 Aligned_cols=100 Identities=25% Similarity=0.347 Sum_probs=58.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhh------h
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-QPQ---LENA------L 107 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~a------l 107 (353)
.+++.|+||+|.+|..++..|+..|. ++++.|... ....+.++... ...+..+.. -+| .++. +
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 35899999999999999999999987 899999754 22233334322 122222211 122 1121 2
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH
Q 018618 108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG 144 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~ 144 (353)
...|++|..+|..... .++. ...+..|+.....+.+.
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~ 130 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRN 130 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence 4689999999875432 1222 23455665554444443
No 397
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.84 E-value=0.28 Score=44.22 Aligned_cols=113 Identities=17% Similarity=0.195 Sum_probs=61.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT 108 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~ 108 (353)
.+.|+||+|.+|..++..|+..|. +++++.. +. ......++.... ..+..+. .-+|. .+.+.
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCGPNEERAEAWLQEQGALG--FDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhhC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999887 7888776 32 111112222111 1222111 11221 12234
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHHhhCCCcEEEEecCC
Q 018618 109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISNP 160 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNP 160 (353)
..|+||..+|..... ..+ ....+..|......+. +.+++. +.+.+++++..
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~ 138 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSV 138 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcch
Confidence 689999998864311 112 2334566766544443 444333 33456666543
No 398
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.088 Score=47.40 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
++|.|+||+|.+|..++..|++.|. ++++++++.
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~ 37 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLGH--QVIGIARSA 37 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 5899999999999999999999887 899999865
No 399
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.82 E-value=0.21 Score=46.55 Aligned_cols=157 Identities=13% Similarity=0.177 Sum_probs=80.5
Q ss_pred CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCe-EEE-EeCCCchhh-------hhCC
Q 018618 42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAV-VRG-FLGQPQLEN-------ALTG 109 (353)
Q Consensus 42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~-v~~-~~~t~d~~~-------al~~ 109 (353)
+.+.|+||++ -+|..++..|++.|. .|++.|.+. ....+.++........ +.. .+...+.++ .+..
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~--~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCC--EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 4788999953 699999999999997 889988764 2233334432211011 110 000111221 1235
Q ss_pred CcEEEEcCCCCCCC--------CCCHH---HHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618 110 MDLVIIPAGVPRKP--------GMTRD---DLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGT 177 (353)
Q Consensus 110 ADiVIi~ag~~~~~--------g~~r~---~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~ 177 (353)
.|++|..+|..... ..+.. ..+..|+.....+.+.+... .+++.|+++|.-.... .
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~------------~ 152 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------A 152 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC------------C
Confidence 79999999853211 12222 23344654433333333222 2356777766432111 1
Q ss_pred CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.|..-.++.+......+-+.+|..++ +..|++..+
T Consensus 153 ~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~i 187 (262)
T PRK07984 153 IPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAI 187 (262)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEEeee
Confidence 22223455554445567777877763 445554444
No 400
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.81 E-value=0.32 Score=46.06 Aligned_cols=119 Identities=17% Similarity=0.221 Sum_probs=77.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE----eCCCchh-------hhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLE-------NALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~----~~t~d~~-------~al~ 108 (353)
+.|.|+||++-+|.++|+.++..|. .++++-... ++-...++.......++... +..++.+ ..+.
T Consensus 13 kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 13 KVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 4788999999999999999999998 778888765 33333555443221111111 1112222 3468
Q ss_pred CCcEEEEcCCCCCCCCC----C---HHHHHHH----HHHHHHHHHHHHHhhCCCcEEEEecCCCCch
Q 018618 109 GMDLVIIPAGVPRKPGM----T---RDDLFNI----NAGIVRTLCEGIAKCCPNATVNLISNPVNST 164 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g~----~---r~~~~~~----N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~ 164 (353)
+.|+.|..||..+ .+. + ....+.- .+-..+...+.+++.. ++.|++++...+.+
T Consensus 91 ~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 91 RVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM 155 (282)
T ss_pred CCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc
Confidence 9999999999877 331 1 1223333 4677888888888877 78888877766544
No 401
>PRK06484 short chain dehydrogenase; Validated
Probab=95.81 E-value=0.047 Score=55.76 Aligned_cols=156 Identities=17% Similarity=0.224 Sum_probs=85.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEE-EeCCCchhhhh-------CCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRG-FLGQPQLENAL-------TGM 110 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al-------~~A 110 (353)
.+++.|+||+|.+|..++..|+..|. +|+++|++. .+....++.. .. ..+.. .....+.++.+ ..-
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGD-EH-LSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC-ce-eEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35899999999999999999999997 899999875 2222222211 10 01111 11111222222 357
Q ss_pred cEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618 111 DLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 182 (353)
Q Consensus 111 DiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k 182 (353)
|++|..+|... .+ ..+ ....+..|+.....+.+.+..+ ...+.|+++|...... +.|..-
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~ 412 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL------------ALPPRN 412 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC------------CCCCCc
Confidence 99999998642 11 122 2344566766655555554433 2346777776543221 233333
Q ss_pred eEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618 183 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214 (353)
Q Consensus 183 viG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi 214 (353)
.++.+......+-+.+++.+. +..|++..+
T Consensus 413 ~Y~asKaal~~l~~~la~e~~--~~gI~vn~v 442 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWA--PAGIRVNTV 442 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence 455544444456667777663 344444333
No 402
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.81 E-value=0.13 Score=51.68 Aligned_cols=117 Identities=20% Similarity=0.249 Sum_probs=68.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL 112 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADi 112 (353)
..++.|+||+|.+|..++..|+..|. +++++|.........++........+.. .....+.+.. +...|+
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 35899999999999999999999887 8999998542222222221110011111 1011111111 236899
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618 113 VIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 159 (353)
Q Consensus 113 VIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 159 (353)
||+++|..... .++ ....+..|+.....+.+.+... .+.+.++++|.
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 99999865321 122 2344567877777777777652 24466776664
No 403
>PLN02712 arogenate dehydrogenase
Probab=95.80 E-value=0.063 Score=56.96 Aligned_cols=66 Identities=21% Similarity=0.328 Sum_probs=46.1
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC-CCcEEEEcC
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPA 117 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-~ADiVIi~a 117 (353)
..++||+|||. |.+|..++..|...|. +|+.+|.+.....+.+ . + +... +++++.+. ++|+||++.
T Consensus 367 ~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~~---~--G--v~~~---~~~~el~~~~aDvVILav 433 (667)
T PLN02712 367 GSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQK---L--G--VSYF---SDADDLCEEHPEVILLCT 433 (667)
T ss_pred CCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHHH---c--C--CeEe---CCHHHHHhcCCCEEEECC
Confidence 35689999998 9999999999988886 8999998752111111 1 1 1221 35556565 599999984
No 404
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.80 E-value=0.06 Score=51.87 Aligned_cols=65 Identities=20% Similarity=0.198 Sum_probs=43.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.+||+|||+ |++|.+++..|...|+ ++++.+....... ..+.... +.. .+..+++++||+|+++.
T Consensus 3 ~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~~-~~a~~~G----v~~----~s~~ea~~~ADiVvLaV 67 (314)
T TIGR00465 3 GKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGASW-KKATEDG----FKV----GTVEEAIPQADLIMNLL 67 (314)
T ss_pred cCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhhH-HHHHHCC----CEE----CCHHHHHhcCCEEEEeC
Confidence 468999999 9999999999999887 6666554431111 1111111 121 13567889999999985
No 405
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.77 E-value=0.08 Score=47.45 Aligned_cols=34 Identities=18% Similarity=0.398 Sum_probs=30.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.||+|+|+ |.+|+.++..|+..|. .+|+++|.+.
T Consensus 22 s~VlIiG~-gglG~evak~La~~GV-g~i~lvD~d~ 55 (197)
T cd01492 22 ARILLIGL-KGLGAEIAKNLVLSGI-GSLTILDDRT 55 (197)
T ss_pred CcEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 49999999 8899999999999997 4899999764
No 406
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=95.77 E-value=0.037 Score=51.45 Aligned_cols=121 Identities=18% Similarity=0.199 Sum_probs=78.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCC----C-----CcEEEEEeCCC--cHH------HHHHHhcCCCCCeEEEEeCCCch
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINP----L-----VSVLHLYDVVN--TPG------VTADISHMDTGAVVRGFLGQPQL 103 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~----~-----~~el~L~D~~~--~~~------~~~dl~~~~~~~~v~~~~~t~d~ 103 (353)
..||.+.|| |..|..++.+|...+ + .+.++++|... ..+ ....+.+.. ..-. ...++
T Consensus 25 d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~--~~~~---~~~~L 98 (254)
T cd00762 25 EHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFA--NPER---ESGDL 98 (254)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHc--Cccc---ccCCH
Confidence 469999999 999999998776543 2 14899999875 111 111111010 0111 12578
Q ss_pred hhhhC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC--chhHHHHHHHHHhCCCC
Q 018618 104 ENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTYD 179 (353)
Q Consensus 104 ~~al~--~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~~~~~~~~~~~~~~ 179 (353)
.++++ ++|++|=+.+.+ |. +.+++.+.|.+++++.+|+-.|||.. -.++ +-.++.+ +
T Consensus 99 ~eav~~~kptvlIG~S~~~---g~-----------ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tp---e~a~~~t--~ 159 (254)
T cd00762 99 EDAVEAAKPDFLIGVSRVG---GA-----------FTPEVIRAXAEINERPVIFALSNPTSKAECTA---EEAYTAT--E 159 (254)
T ss_pred HHHHHhhCCCEEEEeCCCC---CC-----------CCHHHHHHHhhcCCCCEEEECCCcCCccccCH---HHHHhhc--C
Confidence 99999 999998876544 21 24578889999999999999999986 4443 2223432 1
Q ss_pred CCceEee
Q 018618 180 PKKLLGV 186 (353)
Q Consensus 180 ~~kviG~ 186 (353)
-+.+|+.
T Consensus 160 G~ai~At 166 (254)
T cd00762 160 GRAIFAS 166 (254)
T ss_pred CCEEEEE
Confidence 2467777
No 407
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.74 E-value=0.058 Score=52.25 Aligned_cols=73 Identities=15% Similarity=0.240 Sum_probs=49.6
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.++|+|+|+ |..|...+..+....-+.+|.++|++. ++..+.++.+.. ...+.. ..|+++++.+||+||.+..
T Consensus 132 ~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~-g~~v~~---~~d~~~al~~aDiVi~aT~ 206 (330)
T PRK08291 132 ASRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAEL-GIPVTV---ARDVHEAVAGADIIVTTTP 206 (330)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhcc-CceEEE---eCCHHHHHccCCEEEEeeC
Confidence 358999999 888888777776533356999999876 333444444321 223333 2578899999999988753
No 408
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.74 E-value=0.0082 Score=59.21 Aligned_cols=71 Identities=25% Similarity=0.312 Sum_probs=44.2
Q ss_pred EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEE--EeC--CCchhhhhCCCcEEEEcC
Q 018618 44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRG--FLG--QPQLENALTGMDLVIIPA 117 (353)
Q Consensus 44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~--~~~--t~d~~~al~~ADiVIi~a 117 (353)
|.|+|+ |.+|+.++..|++.+...++++.|++..+ ..+..+ . ...+.. ... ..++++.++++|+||.++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~-~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~ 75 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---L-GDRVEAVQVDVNDPESLAELLRGCDVVINCA 75 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----T-TTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---c-ccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence 789999 99999999999988765599999997622 222222 1 122222 111 123557889999999998
Q ss_pred CC
Q 018618 118 GV 119 (353)
Q Consensus 118 g~ 119 (353)
|.
T Consensus 76 gp 77 (386)
T PF03435_consen 76 GP 77 (386)
T ss_dssp SG
T ss_pred cc
Confidence 64
No 409
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.17 Score=45.36 Aligned_cols=113 Identities=17% Similarity=0.169 Sum_probs=64.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh---hC--CCcEEEE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA---LT--GMDLVII 115 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a---l~--~ADiVIi 115 (353)
+++.|+||+|.+|++++..|+..|. +|+++|.+.... .++..... ..+.. .....++++. +. ..|+||.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAAL--AALQALGA-EALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHHH--HHHHhccc-eEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 4789999999999999999988887 899999875211 12222111 01111 1111222221 22 4799999
Q ss_pred cCCCCC--C-C--CCCH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618 116 PAGVPR--K-P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 159 (353)
Q Consensus 116 ~ag~~~--~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 159 (353)
++|... . + ..+. ...+..|+.....+.+.+..+- ..+.+++++.
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS 130 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS 130 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence 988642 1 1 1122 3346677777667766665432 2344555543
No 410
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.71 E-value=0.051 Score=52.58 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=49.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..+++|||+ |.+|...+..+.......+|.++|++. ++..+.++.+. ...+... .+.++++++||+|+.+.
T Consensus 128 ~~~lgiiG~-G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~--g~~v~~~---~~~~eav~~aDiVitaT 200 (325)
T TIGR02371 128 SSVLGIIGA-GRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDY--EVPVRAA---TDPREAVEGCDILVTTT 200 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhh--CCcEEEe---CCHHHHhccCCEEEEec
Confidence 358999999 999998666655544467999999987 33344444432 2233432 46789999999999864
No 411
>PRK05599 hypothetical protein; Provisional
Probab=95.70 E-value=0.57 Score=42.89 Aligned_cols=146 Identities=13% Similarity=0.155 Sum_probs=78.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---h-------hhhhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~-------~~al~ 108 (353)
|.+.|+||++.+|..++..|++ |. .|++.++++ ++..+.++..... ..+..+. .-+| . .+.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE--DVVLAARRPEAAQGLASDLRQRGA-TSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC--EEEEEeCCHHHHHHHHHHHHhccC-CceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 4588999999999999999884 65 899999876 3444445543211 1111110 0011 1 12234
Q ss_pred CCcEEEEcCCCCCCCC---CCH---HHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618 109 GMDLVIIPAGVPRKPG---MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY 178 (353)
Q Consensus 109 ~ADiVIi~ag~~~~~g---~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~ 178 (353)
.-|++|+.+|...... .+. .+....|. ...+.+.+.+.+...++.|+++|.-.... +.
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------~~ 144 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR------------AR 144 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc------------CC
Confidence 6899999988642211 111 12223332 33345556665444456777776543322 11
Q ss_pred CCCceEeechhhHHHHHHHHHHHhC
Q 018618 179 DPKKLLGVTMLDVVRANTFVAEVLG 203 (353)
Q Consensus 179 ~~~kviG~t~ld~~R~~~~lA~~l~ 203 (353)
|..-.++.+.-....+-+.+++.++
T Consensus 145 ~~~~~Y~asKaa~~~~~~~la~el~ 169 (246)
T PRK05599 145 RANYVYGSTKAGLDAFCQGLADSLH 169 (246)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHhc
Confidence 2223455554444456677777763
No 412
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.65 E-value=0.035 Score=54.42 Aligned_cols=71 Identities=15% Similarity=0.166 Sum_probs=46.4
Q ss_pred CeEEEEcCCCCcHHHHHHHHH-hCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMK-INPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~-~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
+||+|+||+|.||+.+...|. +.++ ..+++++......+....... ..+... ..++ .+++.+.|+|++++|
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~----~~~~v~-~~~~-~~~~~~vDivffa~g 73 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGG----TTGTLQ-DAFD-IDALKALDIIITCQG 73 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCC----CcceEE-cCcc-cccccCCCEEEEcCC
Confidence 489999999999999999888 5555 378899987553222221111 122221 1122 246899999999875
No 413
>PRK06484 short chain dehydrogenase; Validated
Probab=95.64 E-value=0.12 Score=52.83 Aligned_cols=115 Identities=17% Similarity=0.117 Sum_probs=63.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhh-------hhCCCcE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLEN-------ALTGMDL 112 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~-------al~~ADi 112 (353)
+.+.|+||++.+|..++..|++.|. +|+++|++. ......++.........+. ....+.++ .+...|+
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNVERARERADSLGPDHHALAMDV-SDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCceeEEEecc-CCHHHHHHHHHHHHHHhCCCCE
Confidence 4788999999999999999999987 899999865 2222222211100000111 11112222 2346899
Q ss_pred EEEcCCCCC---CC--CCC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEecC
Q 018618 113 VIIPAGVPR---KP--GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 113 VIi~ag~~~---~~--g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN 159 (353)
+|..+|... .+ ..+ ....+..|+..... +.+.+.+....+.+++++.
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS 141 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS 141 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 999988621 11 122 23345566554444 4444443333336666654
No 414
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.61 E-value=0.17 Score=45.76 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+++.|+||+|.+|.+++..|+..|. +|++.|.++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 36 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTH 36 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCc
Confidence 4789999999999999999999888 899999875
No 415
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.6 Score=42.83 Aligned_cols=114 Identities=18% Similarity=0.145 Sum_probs=64.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh------hhhCCCcE
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE------NALTGMDL 112 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~------~al~~ADi 112 (353)
+++.|+|++|.+|..++..|+..|. +|+++|++. ......++.... ...+..+. .-+|.+ +.+...|+
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 5899999999999999999999887 899999875 222233343211 11222211 112221 12467999
Q ss_pred EEEcCCCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecC
Q 018618 113 VIIPAGVPRK-P--GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 113 VIi~ag~~~~-~--g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 159 (353)
+|..+|.... + ..+. ...+..|+... +.+.+.+.+. ..+.++++|.
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss 140 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG 140 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence 9999886421 1 1222 23345565544 3444444433 2355665553
No 416
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.60 E-value=0.059 Score=52.10 Aligned_cols=73 Identities=10% Similarity=0.161 Sum_probs=49.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
..+++|+|+ |..|...+..+....-+.+|.++|+++ ....+.++.+. ....+..+ .|+++++.+||+|+.+..
T Consensus 127 ~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~-~~~~~~~~---~~~~~~~~~aDiVi~aT~ 201 (325)
T PRK08618 127 AKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSK-FNTEIYVV---NSADEAIEEADIIVTVTN 201 (325)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHh-cCCcEEEe---CCHHHHHhcCCEEEEccC
Confidence 348999999 999887776665443457999999986 33334444321 12233333 467889999999998753
No 417
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=95.58 E-value=0.043 Score=52.00 Aligned_cols=60 Identities=18% Similarity=0.307 Sum_probs=43.6
Q ss_pred EEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 46 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 46 IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|||. |.+|..++..|...|+ +|.++|+++.. ..++.... ... +.++.++++++|+||++.
T Consensus 1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG----AQA---AASPAEAAEGADRVITML 60 (288)
T ss_pred CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 5798 9999999999999887 89999987622 22233211 111 245678899999999985
No 418
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.57 E-value=0.025 Score=55.98 Aligned_cols=76 Identities=13% Similarity=0.173 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.++||+|+||+|.+|..+...|...+.. +|.++..+...+......+... ......+. ..+ .+.++++|+|+++.+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~-el~~l~s~~saG~~i~~~~~~l~~~~~~~~~-~~~-~~~~~~~DvVf~Alp 113 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDF-EITVMTADRKAGQSFGSVFPHLITQDLPNLV-AVK-DADFSDVDAVFCCLP 113 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCC-eEEEEEChhhcCCCchhhCccccCcccccee-cCC-HHHhcCCCEEEEcCC
Confidence 5679999999999999999998888543 8888876542232211111100 01111110 122 234789999999753
No 419
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.55 E-value=0.67 Score=43.22 Aligned_cols=68 Identities=25% Similarity=0.261 Sum_probs=43.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+|||+|+|++|.+|+.++..+...+-..-+.++|.+....... . . ..+.. .+|+++.++++|+||...
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--~--~--~~i~~---~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--G--A--LGVAI---TDDLEAVLADADVLIDFT 68 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--C--C--CCccc---cCCHHHhccCCCEEEECC
Confidence 4799999988999999998877654332344578765211111 1 1 12222 357878788999999664
No 420
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.53 E-value=0.14 Score=47.11 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=29.5
Q ss_pred CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+.+.|+||+ +.+|..++..|++.|. +|++.++++
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~--~Vi~~~r~~ 43 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGA--TVIYTYQND 43 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEecCch
Confidence 478999996 5899999999999998 899998764
No 421
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.53 E-value=0.049 Score=54.64 Aligned_cols=71 Identities=23% Similarity=0.201 Sum_probs=45.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-hCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-LTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-l~~ADiVIi~a 117 (353)
|||.|+|+ |.+|..++..|...|. +++++|.++.. ...+.......-+.+ ......++++ ++++|.||++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~--~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEER--LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHH--HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 68999999 9999999999998887 89999987622 112221110011111 0011233444 78999999974
No 422
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.53 E-value=0.061 Score=56.43 Aligned_cols=138 Identities=17% Similarity=0.210 Sum_probs=82.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchh----hhhCCCcEEEEc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLE----NALTGMDLVIIP 116 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~----~al~~ADiVIi~ 116 (353)
..+|.|+|. |.+|+.++..|...+. +++++|.|+.. +..+.+.. .+-+.+ ..++.+ ..+++||.||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g-~~v~~G--Dat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDISA--VNLMRKYG-YKVYYG--DATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhCC-CeEEEe--eCCCHHHHHhcCCccCCEEEEE
Confidence 368999999 9999999999998888 89999988621 22233322 122222 123321 235789999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHH
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN 195 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~ 195 (353)
.+.. ..|. .++..++++.|+..++.-+ ||.+.- .+++. | .+.++-=+...+.++-
T Consensus 472 ~~d~-----------~~n~----~i~~~~r~~~p~~~IiaRa~~~~~~~------~L~~~-G--a~~vv~e~~es~l~l~ 527 (601)
T PRK03659 472 CNEP-----------EDTM----KIVELCQQHFPHLHILARARGRVEAH------ELLQA-G--VTQFSRETFSSALELG 527 (601)
T ss_pred eCCH-----------HHHH----HHHHHHHHHCCCCeEEEEeCCHHHHH------HHHhC-C--CCEEEccHHHHHHHHH
Confidence 4211 3333 3556677888997776544 654322 23333 3 3445433433344454
Q ss_pred HHHHHHhCCCCCCCc
Q 018618 196 TFVAEVLGLDPRDVD 210 (353)
Q Consensus 196 ~~lA~~l~v~~~~v~ 210 (353)
...=..+|++++++.
T Consensus 528 ~~~L~~lg~~~~~~~ 542 (601)
T PRK03659 528 RKTLVSLGMHPHQAQ 542 (601)
T ss_pred HHHHHHcCCCHHHHH
Confidence 445567787776653
No 423
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.53 E-value=0.05 Score=55.55 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC--CCCC-eEEEEeCCCchhhhhCC---CcEE
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTGA-VVRGFLGQPQLENALTG---MDLV 113 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~--~~~~-~v~~~~~t~d~~~al~~---ADiV 113 (353)
..++|++||- |.+|+.+|..|+..|+ +|.++|++..+. .++.+. ..+. .+.. ..+++++.+. +|+|
T Consensus 5 ~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k~--~~l~~~~~~~Ga~~~~~---a~s~~e~v~~l~~~dvI 76 (493)
T PLN02350 5 ALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKV--DETVERAKKEGNLPLYG---FKDPEDFVLSIQKPRSV 76 (493)
T ss_pred CCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHhhhhcCCccccc---CCCHHHHHhcCCCCCEE
Confidence 3468999998 9999999999999998 999999875222 222221 0011 1111 2345555554 9999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCC
Q 018618 114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPV 161 (353)
Q Consensus 114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv 161 (353)
|+..... +.+.++...+... .|+.++|..||-.
T Consensus 77 i~~v~~~---------------~aV~~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 77 IILVKAG---------------APVDQTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred EEECCCc---------------HHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 9974211 1223333333333 3677777777543
No 424
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.15 Score=47.72 Aligned_cols=110 Identities=18% Similarity=0.216 Sum_probs=61.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh------CCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------TGM 110 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------~~A 110 (353)
.+.|+|| |.+|.+++..|. .|. +|++.|++. ......++... ...+..+. .-+| .+.++ ...
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATAQTLGPV 77 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence 4566676 899999999986 665 999999875 22222333321 11222111 1122 22222 468
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 159 (353)
Q Consensus 111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 159 (353)
|++|..+|... ...+....+..|+.....+++.+...- +++.+++++.
T Consensus 78 d~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS 126 (275)
T PRK06940 78 TGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS 126 (275)
T ss_pred CEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence 99999998652 223445567778766666666555432 3344444443
No 425
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.52 E-value=0.14 Score=50.19 Aligned_cols=33 Identities=30% Similarity=0.518 Sum_probs=30.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||+|+|+ |.+|+.++..|+..|.. +|.++|.+.
T Consensus 30 ~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~ 62 (355)
T PRK05597 30 KVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDT 62 (355)
T ss_pred eEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence 9999999 99999999999998874 899999864
No 426
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.46 E-value=0.026 Score=55.04 Aligned_cols=71 Identities=24% Similarity=0.420 Sum_probs=45.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
++||+|+||+|++|..+...|...++ ..+|..+......|...+.. ...+... ..+ .+++.++|+||++.+
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~----~~~~~v~--~~~-~~~~~~~D~vf~a~p 78 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE----GRDYTVE--ELT-EDSFDGVDIALFSAG 78 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec----CceeEEE--eCC-HHHHcCCCEEEECCC
Confidence 37999999999999999998887553 45777775544222222221 1222221 123 256789999999865
No 427
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.44 E-value=0.11 Score=52.02 Aligned_cols=90 Identities=20% Similarity=0.153 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
+..+|+|+|+ |.+|..++..+...|. +++.+|+++.+ ..+..+ +. .. .+.+++++++|+||.+.|
T Consensus 201 ~GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~~-----G~--~~----~~~~e~v~~aDVVI~atG 266 (413)
T cd00401 201 AGKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAME-----GY--EV----MTMEEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHhc-----CC--EE----ccHHHHHcCCCEEEECCC
Confidence 4569999999 9999999999988887 78889987632 222211 11 11 123577899999999865
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 160 (353)
.+ ..+.. ..+....+.+++++++.+
T Consensus 267 ~~---------------~~i~~--~~l~~mk~GgilvnvG~~ 291 (413)
T cd00401 267 NK---------------DIITG--EHFEQMKDGAIVCNIGHF 291 (413)
T ss_pred CH---------------HHHHH--HHHhcCCCCcEEEEeCCC
Confidence 32 11111 113334478899999865
No 428
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.44 E-value=0.085 Score=49.96 Aligned_cols=113 Identities=17% Similarity=0.328 Sum_probs=71.5
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eC----------CCchhhh
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LG----------QPQLENA 106 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~----------t~d~~~a 106 (353)
....|.|+||++-+|..+|..+++.|- .++|.|++. ....+..+.+.. .+..+ .. ....++.
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g---~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIG---EAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcC---ceeEEEecCCCHHHHHHHHHHHHHh
Confidence 345899999988899999999999887 899999998 344444444321 11110 00 1223456
Q ss_pred hCCCcEEEEcCCCC-CCCC--CCHHHH---HHHH----HHHHHHHHHHHHhhCCCcEEEEec
Q 018618 107 LTGMDLVIIPAGVP-RKPG--MTRDDL---FNIN----AGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 107 l~~ADiVIi~ag~~-~~~g--~~r~~~---~~~N----~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
..+.|++|..||.. .++. .++.+. ++.| ...++...+.+.+.+ ++.|+.++
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~Ia 172 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIA 172 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEeh
Confidence 78999999999964 3332 333322 2233 466788888888664 55554443
No 429
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.44 E-value=0.12 Score=51.79 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
...+|+|+|. |.+|..++..+...|. +|+++|+++.+.... ..+ +.. . .+++++++++|+||.+.|.
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A-~~~---G~~--v----~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQA-AMD---GFR--V----MTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHH-Hhc---CCE--e----cCHHHHHhCCCEEEECCCC
Confidence 4569999999 9999999999998887 899999987322111 111 111 1 1356788999999987542
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 161 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 161 (353)
+ .++. .+.+....+.+++++++-+.
T Consensus 278 ~---------------~vI~--~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 278 K---------------DVIT--AEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred H---------------HHHH--HHHHhcCCCCCEEEEcCCCC
Confidence 2 1121 12233334678999888543
No 430
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.43 E-value=0.056 Score=54.15 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=64.2
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH--HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
.+..+|+|+|+ |.+|..++..|...|. .+|+++|++..+. .+..+. .. .+ ...++.+++.++|+||.+
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~-~~V~v~~rs~~ra~~la~~~g-----~~--~i-~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGV-GKILIANRTYERAEDLAKELG-----GE--AV-KFEDLEEYLAEADIVISS 247 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHcC-----Ce--Ee-eHHHHHHHHhhCCEEEEC
Confidence 44579999999 9999999999988773 3899999875222 222221 11 11 113567888999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST 164 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~ 164 (353)
.+.+..- .+. +..+...... ...+++-+++|-|+-
T Consensus 248 T~s~~~i-i~~------------e~l~~~~~~~~~~~~viDla~Prdid 283 (417)
T TIGR01035 248 TGAPHPI-VSK------------EDVERALRERTRPLFIIDIAVPRDVD 283 (417)
T ss_pred CCCCCce-EcH------------HHHHHHHhcCCCCeEEEEeCCCCCCC
Confidence 7654211 111 1111111111 245788889998866
No 431
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.42 E-value=0.075 Score=50.93 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=49.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
..+|+|+|+ |.+|...+..+.......++.++|++. +...+.++... ...+. ..++++++.+||+||.+..
T Consensus 125 ~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~--~~~~~----~~~~~~av~~aDiVitaT~ 197 (304)
T PRK07340 125 PGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL--GPTAE----PLDGEAIPEAVDLVVTATT 197 (304)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc--CCeeE----ECCHHHHhhcCCEEEEccC
Confidence 459999999 999999988876532336899999986 33444444432 12222 1467789999999999754
No 432
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.40 E-value=0.055 Score=52.06 Aligned_cols=69 Identities=17% Similarity=0.301 Sum_probs=46.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.+++|+|+ |..+..-+..+.. .+ ..+|.++|++. .+..+.++.+ . ...+... .|.++|+++||+|+.+.
T Consensus 129 ~~l~viGa-G~QA~~~~~a~~~~~~-i~~v~v~~r~~~~~~~~~~~~~~-~-~~~v~~~---~~~~~av~~aDii~taT 200 (313)
T PF02423_consen 129 RTLGVIGA-GVQARWHLRALAAVRP-IKEVRVYSRSPERAEAFAARLRD-L-GVPVVAV---DSAEEAVRGADIIVTAT 200 (313)
T ss_dssp -EEEEE---SHHHHHHHHHHHHHS---SEEEEE-SSHHHHHHHHHHHHC-C-CTCEEEE---SSHHHHHTTSSEEEE--
T ss_pred ceEEEECC-CHHHHHHHHHHHHhCC-ceEEEEEccChhHHHHHHHhhcc-c-cccceec---cchhhhcccCCEEEEcc
Confidence 38999999 9888877766655 45 78999999987 4556667776 2 4455543 57899999999999864
No 433
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.37 E-value=0.07 Score=53.99 Aligned_cols=90 Identities=21% Similarity=0.230 Sum_probs=60.6
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH-HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~-~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
...+|+|+|. |.+|..+|..+...|. +|+.+|+++... .+.. + .. +. .+++++++.||+||.+.|
T Consensus 253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~~--~---G~--~~----~~leell~~ADIVI~atG 318 (476)
T PTZ00075 253 AGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAAM--E---GY--QV----VTLEDVVETADIFVTATG 318 (476)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHh--c---Cc--ee----ccHHHHHhcCCEEEECCC
Confidence 3568999999 9999999999987777 899998876322 1111 1 11 11 246788999999999865
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 160 (353)
.+. ++. .+.+....|.+++++++-.
T Consensus 319 t~~---------------iI~--~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 319 NKD---------------IIT--LEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred ccc---------------ccC--HHHHhccCCCcEEEEcCCC
Confidence 221 111 1234444588999998854
No 434
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.36 E-value=0.04 Score=53.78 Aligned_cols=74 Identities=24% Similarity=0.218 Sum_probs=44.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEE-EEeCCCcHHHHHHHhcC--CCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~-L~D~~~~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
+||+|+||+|.+|..++..|...+.. +++ +++.+...+....-.+. .....+... ..|.++.+.++|+|+++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLNLE--PIDEEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCceee--cCCHHHhhcCCCEEEECCC
Confidence 58999999999999999999876543 666 66765422221111111 110111221 1244444468999999753
No 435
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.35 E-value=0.083 Score=50.57 Aligned_cols=73 Identities=16% Similarity=0.075 Sum_probs=51.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
..+++|+|+ |..|..-+..+..-..+.+|.++|++. ....+.++.+.. ...+... .+.++++++||+|+.+..
T Consensus 117 a~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~-~~~v~~~---~~~~eav~~aDIV~taT~ 191 (301)
T PRK06407 117 VENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEF-GVDIRPV---DNAEAALRDADTITSITN 191 (301)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhc-CCcEEEe---CCHHHHHhcCCEEEEecC
Confidence 458999999 988887776666554568999999987 344455555421 2344443 467899999999998643
No 436
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.32 E-value=0.78 Score=42.37 Aligned_cols=156 Identities=12% Similarity=0.108 Sum_probs=80.8
Q ss_pred CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcC-CCCCeEEE-EeCCCchh-------hhhCC
Q 018618 42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRG-FLGQPQLE-------NALTG 109 (353)
Q Consensus 42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~-~~~~~v~~-~~~t~d~~-------~al~~ 109 (353)
+.+.|+||++ -+|..++..|+..|. +|++.+.++ ....+.++... .....+.. .+...+.+ +.+..
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~--~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGA--ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCC--EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4688999964 599999999998887 888888764 22223334321 10001110 11111111 22456
Q ss_pred CcEEEEcCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618 110 MDLVIIPAGVPRK-----P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTY 178 (353)
Q Consensus 110 ADiVIi~ag~~~~-----~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~ 178 (353)
.|++|..+|.... + ..+. ...+..|+.....+.+.+..+- ..+.|++++...... +.
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------~~ 154 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------------VI 154 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------------CC
Confidence 8999998875321 1 1222 2334555554444444332221 346777776533211 12
Q ss_pred CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceE
Q 018618 179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 213 (353)
Q Consensus 179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~v 213 (353)
|..-.++.+......+-+.+|..+. +..|++..
T Consensus 155 ~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~ 187 (260)
T PRK06603 155 PNYNVMGVAKAALEASVKYLANDMG--ENNIRVNA 187 (260)
T ss_pred CcccchhhHHHHHHHHHHHHHHHhh--hcCeEEEE
Confidence 2223455555455566777877764 44454433
No 437
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.31 E-value=0.061 Score=55.52 Aligned_cols=64 Identities=22% Similarity=0.339 Sum_probs=46.6
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.++|+|+|- |.+|+.+|..|..-|. +|+.||+......+.++ . +.. ..++++.+++||+|++..
T Consensus 138 gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvV~l~l 201 (525)
T TIGR01327 138 GKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQL---G----VEL---VDDLDELLARADFITVHT 201 (525)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc---C----CEE---cCCHHHHHhhCCEEEEcc
Confidence 468999999 9999999999987777 99999975322222211 1 121 135788999999999974
No 438
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.30 E-value=0.097 Score=50.37 Aligned_cols=70 Identities=16% Similarity=0.303 Sum_probs=48.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..+|+|||+ |.+|...+..+.. .+ ..+|.++|++. ....+.++.+. ...+... .+.++++++||+|+.+.
T Consensus 125 ~~~v~iiG~-G~~a~~~~~al~~~~~-~~~V~V~~Rs~~~a~~~a~~~~~~--g~~~~~~---~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 125 ASRLLVVGT-GRLASLLALAHASVRP-IKQVRVWGRDPAKAEALAAELRAQ--GFDAEVV---TDLEAAVRQADIISCAT 197 (314)
T ss_pred CceEEEECC-cHHHHHHHHHHHhcCC-CCEEEEEcCCHHHHHHHHHHHHhc--CCceEEe---CCHHHHHhcCCEEEEee
Confidence 458999998 9999999875554 44 45999999876 34444444432 1223332 45678899999997654
No 439
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.30 E-value=0.16 Score=50.04 Aligned_cols=32 Identities=31% Similarity=0.624 Sum_probs=29.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 76 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~ 76 (353)
||.|+|+ |-+|+.++..|+..|. .+|.|+|.+
T Consensus 137 ~VlvvG~-GG~Gs~ia~~La~~Gv-g~i~lvD~d 168 (376)
T PRK08762 137 RVLLIGA-GGLGSPAALYLAAAGV-GTLGIVDHD 168 (376)
T ss_pred cEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence 8999999 9999999999999986 489999987
No 440
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.29 E-value=0.039 Score=53.58 Aligned_cols=71 Identities=21% Similarity=0.441 Sum_probs=46.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
++||+|+||+|++|..++.+|...++ ..+|..+-.+...+...++.. ..+... ..+ ..+++++|+||++.|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~v~--d~~-~~~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELKVE--DLT-TFDFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeEEe--eCC-HHHHcCCCEEEECCC
Confidence 36999999999999999999988654 347777765442233222221 223332 112 245689999999864
No 441
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.29 E-value=0.39 Score=44.10 Aligned_cols=42 Identities=24% Similarity=0.274 Sum_probs=32.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHh----CCCCcEEEEEeCCC--cHHHHHHHh
Q 018618 43 KVAILGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVN--TPGVTADIS 86 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~----~~~~~el~L~D~~~--~~~~~~dl~ 86 (353)
.+.|+||++.+|..++..|+. .|. .|++.++++ ......++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~--~V~~~~r~~~~~~~~~~~l~ 49 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS--VLVLSARNDEALRQLKAEIG 49 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc--EEEEEEcCHHHHHHHHHHHH
Confidence 478999999999999998886 465 899999876 333344454
No 442
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.22 E-value=0.21 Score=45.09 Aligned_cols=69 Identities=16% Similarity=0.102 Sum_probs=47.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.||.|+|+ |.+|..-+..|+..|. +|++++.+.... ..++... ..+.......+ ...+.++|+||.+.+
T Consensus 10 k~vlVvGg-G~va~rk~~~Ll~~ga--~VtVvsp~~~~~-l~~l~~~---~~i~~~~~~~~-~~dl~~~~lVi~at~ 78 (205)
T TIGR01470 10 RAVLVVGG-GDVALRKARLLLKAGA--QLRVIAEELESE-LTLLAEQ---GGITWLARCFD-ADILEGAFLVIAATD 78 (205)
T ss_pred CeEEEECc-CHHHHHHHHHHHHCCC--EEEEEcCCCCHH-HHHHHHc---CCEEEEeCCCC-HHHhCCcEEEEECCC
Confidence 48999999 9999999999998886 899999765322 2233322 13333323333 356899999998754
No 443
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.19 E-value=0.11 Score=50.17 Aligned_cols=73 Identities=16% Similarity=0.232 Sum_probs=50.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
..+++|||+ |..|...+..|....-+.+|.+++++. ++..+.++.+.. ...+.. ..++++++.+||+|+.+..
T Consensus 129 ~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g~~v~~---~~~~~~av~~aDiVvtaT~ 203 (326)
T TIGR02992 129 SSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-GIDVTA---ATDPRAAMSGADIIVTTTP 203 (326)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-CceEEE---eCCHHHHhccCCEEEEecC
Confidence 358999999 999988888776433356899999986 344444453211 122332 2567889999999999753
No 444
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.18 E-value=0.045 Score=48.12 Aligned_cols=93 Identities=26% Similarity=0.327 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC-
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG- 118 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag- 118 (353)
...+|+|+|. |.+|+.+|..+..-|. +|+.+|+...... ...+. .+.. .++++.++.||+|++...
T Consensus 35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~~----~~~~----~~l~ell~~aDiv~~~~pl 101 (178)
T PF02826_consen 35 RGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADEF----GVEY----VSLDELLAQADIVSLHLPL 101 (178)
T ss_dssp TTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHHT----TEEE----SSHHHHHHH-SEEEE-SSS
T ss_pred CCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hcccc----ccee----eehhhhcchhhhhhhhhcc
Confidence 3469999999 9999999999997777 9999999763222 11111 1121 367889999999999753
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 159 (353)
.+...++-.. +.+.+..+++++|+++-
T Consensus 102 t~~T~~li~~--------------~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 102 TPETRGLINA--------------EFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp STTTTTSBSH--------------HHHHTSTTTEEEEESSS
T ss_pred ccccceeeee--------------eeeeccccceEEEeccc
Confidence 2222232111 12233347889999873
No 445
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=95.14 E-value=0.061 Score=49.64 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=58.5
Q ss_pred EEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHH----hcCC--------CCCeEEEEeCC----------Cc
Q 018618 46 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADI----SHMD--------TGAVVRGFLGQ----------PQ 102 (353)
Q Consensus 46 IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl----~~~~--------~~~~v~~~~~t----------~d 102 (353)
|+||+|++|+++...|+..+...+|+++-+.... .....+ .+.. ...+++.+.+. .+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 6899999999999988877642288888765411 111111 1110 02345554331 12
Q ss_pred hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
+.+..+.+|+||++|+.-. ...+..++...|+...+++++...+.....++.+.|
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~-~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST 135 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVN-FNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST 135 (249)
T ss_dssp HHHHHHH--EEEE--SS-S-BS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE
T ss_pred hhccccccceeeecchhhh-hcccchhhhhhHHHHHHHHHHHHHhccCcceEEecc
Confidence 3333478999999986432 122344466889999999999988544334444444
No 446
>PLN02494 adenosylhomocysteinase
Probab=95.14 E-value=0.13 Score=52.10 Aligned_cols=92 Identities=22% Similarity=0.167 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
...+|+|+|. |.+|..++..+...|. +|+.+|+++.+ ..+. .+. .. . .+++++++.+|+||.+.|
T Consensus 253 aGKtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~--~~G---~~--v----v~leEal~~ADVVI~tTG 318 (477)
T PLN02494 253 AGKVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQAL--MEG---YQ--V----LTLEDVVSEADIFVTTTG 318 (477)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHH--hcC---Ce--e----ccHHHHHhhCCEEEECCC
Confidence 3569999999 9999999999987777 89999987632 2221 111 11 1 134678899999999765
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 162 (353)
... ++. .+.+....+++++++++-+.+
T Consensus 319 t~~---------------vI~--~e~L~~MK~GAiLiNvGr~~~ 345 (477)
T PLN02494 319 NKD---------------IIM--VDHMRKMKNNAIVCNIGHFDN 345 (477)
T ss_pred Ccc---------------chH--HHHHhcCCCCCEEEEcCCCCC
Confidence 321 110 233444457899999987643
No 447
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.09 E-value=0.071 Score=52.55 Aligned_cols=82 Identities=18% Similarity=0.217 Sum_probs=54.4
Q ss_pred hcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCc
Q 018618 33 CRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMD 111 (353)
Q Consensus 33 ~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~AD 111 (353)
....++.++.||+|+|+ |.+|...+..+...|. +|..+|.+..+. ..+.... ...+.. .....++.+.++++|
T Consensus 159 ~~~~~~l~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~--~~l~~~~-g~~v~~~~~~~~~l~~~l~~aD 232 (370)
T TIGR00518 159 LGGVPGVEPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRL--RQLDAEF-GGRIHTRYSNAYEIEDAVKRAD 232 (370)
T ss_pred ecCCCCCCCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHhc-CceeEeccCCHHHHHHHHccCC
Confidence 34555667789999999 9999999999998886 799999875221 1121111 111211 111134667889999
Q ss_pred EEEEcCCCC
Q 018618 112 LVIIPAGVP 120 (353)
Q Consensus 112 iVIi~ag~~ 120 (353)
+||.+.+.+
T Consensus 233 vVI~a~~~~ 241 (370)
T TIGR00518 233 LLIGAVLIP 241 (370)
T ss_pred EEEEccccC
Confidence 999987543
No 448
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=95.09 E-value=0.16 Score=48.18 Aligned_cols=73 Identities=19% Similarity=0.265 Sum_probs=50.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-------------------HH--HHHHHhcCCCCCeEEEEeCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-------------------PG--VTADISHMDTGAVVRGFLGQ 100 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-------------------~~--~~~dl~~~~~~~~v~~~~~t 100 (353)
.||.|+|+ |.+|+.++..|+..|. .+|.|+|.+.. ++ .+..|........++.+...
T Consensus 20 s~VLIvG~-gGLG~EiaKnLalaGV-g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~ 97 (286)
T cd01491 20 SNVLISGL-GGLGVEIAKNLILAGV-KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGP 97 (286)
T ss_pred CcEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEecc
Confidence 49999999 9999999999999997 48999997640 01 11223333323455554333
Q ss_pred CchhhhhCCCcEEEEcC
Q 018618 101 PQLENALTGMDLVIIPA 117 (353)
Q Consensus 101 ~d~~~al~~ADiVIi~a 117 (353)
.+ ++-+.+.|+||.+.
T Consensus 98 ~~-~~~l~~fdvVV~~~ 113 (286)
T cd01491 98 LT-TDELLKFQVVVLTD 113 (286)
T ss_pred CC-HHHHhcCCEEEEec
Confidence 23 46789999998884
No 449
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.07 E-value=0.14 Score=50.45 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=44.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhC-CC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKIN-PL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~-~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
++||+|+||+|.+|..+...++.. ++ ..+++++......+....+.. ....... ..+. +.++++|+|+++++
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g----~~~~v~~-~~~~-~~~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG----KEGTLQD-AFDI-DALKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC----CcceEEe-cCCh-hHhcCCCEEEECCC
Confidence 369999999999999999755554 44 456888776432222212221 1122221 1232 56789999999865
No 450
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.06 E-value=0.085 Score=52.93 Aligned_cols=105 Identities=18% Similarity=0.279 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 116 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ 116 (353)
.+..+|+|+|+ |.+|..++..|...|. .+|+++|++..+ ..+.++. ..+.. ..++.+++.++|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV-RKITVANRTLERAEELAEEFG-----GEAIP---LDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHHHcC-----CcEee---HHHHHHHhccCCEEEEC
Confidence 34579999999 9999999998887764 478999987522 2222221 11111 13566788999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-hhCCCcEEEEecCCCCchh
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIA-KCCPNATVNLISNPVNSTV 165 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~-~~~p~a~viv~tNPv~~~t 165 (353)
.+.+... .+. +.+.. .+. +.....+++-+++|-|+-.
T Consensus 250 T~s~~~~-i~~--------~~l~~---~~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 250 TGAPHPI-IGK--------GMVER---ALKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred CCCCCcE-EcH--------HHHHH---HHhhccCCCeEEEEeCCCCCCcc
Confidence 7654211 111 11111 111 1124578888899988663
No 451
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.05 E-value=0.075 Score=46.48 Aligned_cols=56 Identities=29% Similarity=0.488 Sum_probs=44.4
Q ss_pred CCCCeEEEEcCCCC-cHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 39 AAGFKVAILGAAGG-IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 39 ~~~~KI~IiGa~G~-vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
-...||.|+|+ |. +|..++..|...|. ++.+++.+. .++.+.+++||+||.+.
T Consensus 42 l~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat 95 (168)
T cd01080 42 LAGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVAV 95 (168)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEcC
Confidence 44569999999 86 58889999988876 788888641 24567899999999987
Q ss_pred CCC
Q 018618 118 GVP 120 (353)
Q Consensus 118 g~~ 120 (353)
+.|
T Consensus 96 ~~~ 98 (168)
T cd01080 96 GKP 98 (168)
T ss_pred CCC
Confidence 766
No 452
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.05 E-value=0.25 Score=42.66 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=43.6
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.||.|+|| |.||...+..|...|. +|++++...... ..++. .+......-+ ++.++++|+||.+.
T Consensus 14 ~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~~-l~~l~------~i~~~~~~~~-~~dl~~a~lViaaT 78 (157)
T PRK06719 14 KVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICKE-MKELP------YITWKQKTFS-NDDIKDAHLIYAAT 78 (157)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCHH-HHhcc------CcEEEecccC-hhcCCCceEEEECC
Confidence 48999999 9999999999998887 889997543222 12221 1111111122 35689999999974
No 453
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.05 E-value=0.073 Score=54.92 Aligned_cols=64 Identities=25% Similarity=0.344 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..++|+|+|. |.+|+.+|..+..-|. +|+.||.........++ .+... ++++.++.||+|++..
T Consensus 139 ~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~-------g~~~~----~l~ell~~aDiV~l~l 202 (526)
T PRK13581 139 YGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQL-------GVELV----SLDELLARADFITLHT 202 (526)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc-------CCEEE----cHHHHHhhCCEEEEcc
Confidence 3469999999 9999999999987777 99999975422221111 11221 4678899999999975
No 454
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.03 E-value=0.11 Score=50.13 Aligned_cols=73 Identities=26% Similarity=0.399 Sum_probs=46.7
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHH-HHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~-~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
++||+|+||+|.||+.+...|.+.. .+.++.++=..+..|.. .++..-.. ..... ..| ...++++|+|++++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~-~v~~~---~~~-~~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI-GVPED---AAD-EFVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc-cCccc---ccc-ccccccCCEEEEeCc
Confidence 3699999999999999999999854 46667777765533332 33332111 00110 023 245679999999875
No 455
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=94.98 E-value=0.12 Score=51.43 Aligned_cols=67 Identities=25% Similarity=0.231 Sum_probs=46.9
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
....+|+|+|. |.+|..++..+...|. +|+.+|.++.+.... ..+ .. .. .+.+++++++|+||.+.|
T Consensus 193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A-~~~---G~--~v----~~leeal~~aDVVItaTG 259 (406)
T TIGR00936 193 IAGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEA-AMD---GF--RV----MTMEEAAKIGDIFITATG 259 (406)
T ss_pred CCcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHH-Hhc---CC--Ee----CCHHHHHhcCCEEEECCC
Confidence 34569999999 9999999999987776 899999877322111 111 11 11 124578899999998754
No 456
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.94 E-value=1.4 Score=41.24 Aligned_cols=34 Identities=21% Similarity=0.037 Sum_probs=29.3
Q ss_pred CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+.+.|+||+ +-+|..++..|++.|. .|++.|+++
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~--~Vil~~r~~ 41 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGA--ELAFTYLNE 41 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEecCH
Confidence 478899985 5799999999999997 899999874
No 457
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.93 E-value=0.24 Score=49.25 Aligned_cols=33 Identities=24% Similarity=0.513 Sum_probs=30.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||.|+|+ |.+|+.++..|+..|+. +|.|+|.+.
T Consensus 44 ~VlviG~-GGlGs~va~~La~~Gvg-~i~lvD~D~ 76 (392)
T PRK07878 44 RVLVIGA-GGLGSPTLLYLAAAGVG-TLGIVEFDV 76 (392)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCE
Confidence 9999999 99999999999999874 899999764
No 458
>PRK07041 short chain dehydrogenase; Provisional
Probab=94.87 E-value=0.18 Score=45.20 Aligned_cols=107 Identities=15% Similarity=0.217 Sum_probs=61.0
Q ss_pred EEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe----CCCchhhhhC---CCcEEEEc
Q 018618 46 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLENALT---GMDLVIIP 116 (353)
Q Consensus 46 IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al~---~ADiVIi~ 116 (353)
|+||+|.+|..++..|++.|. +|++++++. ......++.. . ..+..+. ...+++++++ ..|++|..
T Consensus 2 ItGas~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 2 VVGGSSGIGLALARAFAAEGA--RVTIASRSRDRLAAAARALGG-G--APVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred eecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-C--CceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 899999999999999999987 899999875 2222223321 1 1222211 1122333333 46999999
Q ss_pred CCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 117 AGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 117 ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
+|..... ..+ ....+..|+.....+.+ +......+.+++++
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-~~~~~~~g~iv~~s 123 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR-AARIAPGGSLTFVS 123 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh-hhhhcCCeEEEEEC
Confidence 8764221 111 23345667666666666 22233445555544
No 459
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.86 E-value=0.062 Score=51.90 Aligned_cols=73 Identities=26% Similarity=0.220 Sum_probs=47.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC--CCeEEEEeCCCchhh-hhCCCcEEEEc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLEN-ALTGMDLVIIP 116 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~--~~~v~~~~~t~d~~~-al~~ADiVIi~ 116 (353)
++||+|+||+|+.|..+..+|...+.. |+.++...+..|....-.|... ...+... +.|.++ ...+||+||++
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~--~~~~~~~~~~~~DvvFla 77 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQ--TIDPEKIELDECDVVFLA 77 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccccc--cCChhhhhcccCCEEEEe
Confidence 569999999999999999999988754 6888887654444332233221 1122221 123223 24569999997
No 460
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=94.86 E-value=0.87 Score=44.26 Aligned_cols=117 Identities=19% Similarity=0.209 Sum_probs=68.7
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhhCC-CcEEEE
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTG-MDLVII 115 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~-ADiVIi 115 (353)
-.+..+|+|+|+ |-+|..-.+..+..+. +|+.+|+++. ...+.+|.- ..-+.. . ..|.-+++++ +|+||.
T Consensus 164 ~~pG~~V~I~G~-GGlGh~avQ~Aka~ga--~Via~~~~~~K~e~a~~lGA---d~~i~~-~-~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 164 VKPGKWVAVVGA-GGLGHMAVQYAKAMGA--EVIAITRSEEKLELAKKLGA---DHVINS-S-DSDALEAVKEIADAIID 235 (339)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHcCC--eEEEEeCChHHHHHHHHhCC---cEEEEc-C-CchhhHHhHhhCcEEEE
Confidence 344569999999 8788877777776774 9999999873 233443321 111221 1 1233344443 999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC-CchhHH-HHHHHHHhCCCCCCceEee
Q 018618 116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV-NSTVPI-AAEVFKKAGTYDPKKLLGV 186 (353)
Q Consensus 116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv-~~~t~~-~~~~~~~~~~~~~~kviG~ 186 (353)
|++ +. .+-..++...+++.++.+++|- .....+ ...+ -+...+|.|.
T Consensus 236 tv~-~~------------------~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~l-----i~~~~~i~GS 284 (339)
T COG1064 236 TVG-PA------------------TLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLL-----ILKEISIVGS 284 (339)
T ss_pred CCC-hh------------------hHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHh-----hhcCeEEEEE
Confidence 975 31 2222333345789999999994 332211 1111 1345688887
No 461
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.83 E-value=0.18 Score=48.66 Aligned_cols=72 Identities=13% Similarity=0.098 Sum_probs=50.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
..+++|+|+ |..+..-+..+..-....+|.++|++. +...+..+.+. ...+... ++.++++++||+|+.+..
T Consensus 128 ~~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~--~~~v~~~---~~~~~av~~ADIV~taT~ 201 (315)
T PRK06823 128 VSAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL--GFAVNTT---LDAAEVAHAANLIVTTTP 201 (315)
T ss_pred CCEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc--CCcEEEE---CCHHHHhcCCCEEEEecC
Confidence 458999999 988888777666554568999999987 33333334332 2334432 467899999999998643
No 462
>PRK08017 oxidoreductase; Provisional
Probab=94.81 E-value=0.11 Score=47.55 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=30.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+|.|+||+|.+|.+++..|++.|. ++++++++.
T Consensus 4 ~vlVtGasg~IG~~la~~l~~~g~--~v~~~~r~~ 36 (256)
T PRK08017 4 SVLITGCSSGIGLEAALELKRRGY--RVLAACRKP 36 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 799999999999999999998887 889998865
No 463
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.79 E-value=0.12 Score=54.55 Aligned_cols=137 Identities=18% Similarity=0.229 Sum_probs=81.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCch----hhhhCCCcEEEEc
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL----ENALTGMDLVIIP 116 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~----~~al~~ADiVIi~ 116 (353)
..+|.|+|. |.+|+.++..|...+. +++++|.|+.+ +..+.+... .-+.+ ..+|. +..+++||.||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g~-~v~~G--Dat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGV--KMTVLDHDPDH--IETLRKFGM-KVFYG--DATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhcCC-eEEEE--eCCCHHHHHhcCCCcCCEEEEE
Confidence 358999999 9999999999998887 88999998622 222332221 22222 12332 1345689999988
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHH
Q 018618 117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN 195 (353)
Q Consensus 117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~ 195 (353)
...+ ..|. .++..+++..|+..++.-+ |+.+ . +.+++. | .+.++--+.-.+.++-
T Consensus 472 ~~d~-----------~~n~----~i~~~ar~~~p~~~iiaRa~d~~~-~-----~~L~~~-G--ad~v~~e~~e~sl~l~ 527 (621)
T PRK03562 472 IDDP-----------QTSL----QLVELVKEHFPHLQIIARARDVDH-Y-----IRLRQA-G--VEKPERETFEGALKSG 527 (621)
T ss_pred eCCH-----------HHHH----HHHHHHHHhCCCCeEEEEECCHHH-H-----HHHHHC-C--CCEEehhhHhHHHHHH
Confidence 4211 3343 4555666678987766554 4332 1 122232 3 3445444555555666
Q ss_pred HHHHHHhCCCCCCC
Q 018618 196 TFVAEVLGLDPRDV 209 (353)
Q Consensus 196 ~~lA~~l~v~~~~v 209 (353)
+.+-+.+|++++++
T Consensus 528 ~~~L~~lg~~~~~~ 541 (621)
T PRK03562 528 RLVLESLGLGPYEA 541 (621)
T ss_pred HHHHHHcCCCHHHH
Confidence 66667777776443
No 464
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.79 E-value=1.2 Score=41.45 Aligned_cols=152 Identities=14% Similarity=0.131 Sum_probs=79.6
Q ss_pred CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCch----------hhhhC
Q 018618 42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQL----------ENALT 108 (353)
Q Consensus 42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~----------~~al~ 108 (353)
+.+.|+||++ -+|..++..|++.|. .|++.|+++. .....++.+.. ...+-....-+|. .+.+.
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~-g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGA--ELAFTYQGEALGKRVKPLAESL-GSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCC--EEEEecCchHHHHHHHHHHHhc-CCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4688999964 799999999999998 8999987642 11222332111 1111010011121 12235
Q ss_pred CCcEEEEcCCCCCC-----C--CCCHH---HHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHH
Q 018618 109 GMDLVIIPAGVPRK-----P--GMTRD---DLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK 174 (353)
Q Consensus 109 ~ADiVIi~ag~~~~-----~--g~~r~---~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~ 174 (353)
.-|++|..+|.... + ..+.. ..+..|+.... .+.+.+. ..+.||++|......
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~---~~G~Iv~isS~~~~~---------- 151 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP---DGGSMLTLTYGGSTR---------- 151 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc---cCceEEEEcCCCccc----------
Confidence 68999999986421 1 12222 23445554443 3444443 246666665432211
Q ss_pred hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceE
Q 018618 175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 213 (353)
Q Consensus 175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~v 213 (353)
+.|..-.++.+......+-+.+|..++ +..|++..
T Consensus 152 --~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIrVn~ 186 (271)
T PRK06505 152 --VMPNYNVMGVAKAALEASVRYLAADYG--PQGIRVNA 186 (271)
T ss_pred --cCCccchhhhhHHHHHHHHHHHHHHHh--hcCeEEEE
Confidence 122223455554445556777888763 44454333
No 465
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.77 E-value=0.077 Score=48.84 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=49.3
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
|+|.|+||+|++|++++..|...+. +++..-++....... . .........+.....+..+++|.|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~--~v~~~~r~~~~~~~~--~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH--EVRAAVRNPEAAAAL--A-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC--EEEEEEeCHHHHHhh--c-CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 5899999999999999999998876 777766654222222 2 111111111223356678889999999986543
No 466
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=94.76 E-value=0.42 Score=46.14 Aligned_cols=123 Identities=20% Similarity=0.348 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCCCcHHHHHHHHHhC----C-CCcEEEEEeCCC-cHH---HHHHHh---cCC--C------CCeEEEEe
Q 018618 39 AAGFKVAILGAAGGIGQPLAMLMKIN----P-LVSVLHLYDVVN-TPG---VTADIS---HMD--T------GAVVRGFL 98 (353)
Q Consensus 39 ~~~~KI~IiGa~G~vG~~la~~l~~~----~-~~~el~L~D~~~-~~~---~~~dl~---~~~--~------~~~v~~~~ 98 (353)
..+.||+|||+ |+=|+++|..+..+ + ...+|.+.-..+ ..+ ...|.- |.. + +..+.
T Consensus 19 ~~~~kV~ivGs-GnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee~i~~~~~~L~eiIN~~heN~KYlpg~~lP~Nvv--- 94 (372)
T KOG2711|consen 19 RDPLKVCIVGS-GNWGSAIAKIVGENVKEFPIFDPQVRMWVFEEEINGEAEKLTEIINSRHENVKYLPGIKLPENVV--- 94 (372)
T ss_pred cCceEEEEEcc-ChHHHHHHHHHhhhhhhccccCceeeEEEeccccCChhHHHHHHhccccccccccCCccCCCCeE---
Confidence 34579999998 99999999877653 1 112333332222 222 222221 111 1 12333
Q ss_pred CCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc-----hhHHHHHHH
Q 018618 99 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS-----TVPIAAEVF 172 (353)
Q Consensus 99 ~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~-----~t~~~~~~~ 172 (353)
..+|+.++.+|||++|+.. | -+.+.+++++|..+- |++..|-.+-=++. -..+++++.
T Consensus 95 Av~dl~ea~~dADilvf~v--P--------------hQf~~~ic~~l~g~vk~~~~aISL~KG~e~~~~g~~i~liS~iI 158 (372)
T KOG2711|consen 95 AVPDLVEAAKDADILVFVV--P--------------HQFIPRICEQLKGYVKPGATAISLIKGVEVGEEGPGIRLISQII 158 (372)
T ss_pred ecchHHHHhccCCEEEEeC--C--------------hhhHHHHHHHHhcccCCCCeEEEeecceeccCCCCceeehHHHH
Confidence 3579999999999999973 3 233667888888776 56655544321110 012234555
Q ss_pred HHhCCCCCC
Q 018618 173 KKAGTYDPK 181 (353)
Q Consensus 173 ~~~~~~~~~ 181 (353)
.+..|+|-.
T Consensus 159 ~~~lgI~~~ 167 (372)
T KOG2711|consen 159 HRALGIPCS 167 (372)
T ss_pred HHHhCCCce
Confidence 666677655
No 467
>PRK07589 ornithine cyclodeaminase; Validated
Probab=94.75 E-value=0.14 Score=49.92 Aligned_cols=71 Identities=18% Similarity=0.295 Sum_probs=50.0
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..+++|||+ |..+..-+..+..-..+.+|.++|++. ....+.++.+. ...+.. .++.++++++||+|+.+.
T Consensus 129 a~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIIvtaT 201 (346)
T PRK07589 129 SRTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP--GLRIVA---CRSVAEAVEGADIITTVT 201 (346)
T ss_pred CcEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc--CCcEEE---eCCHHHHHhcCCEEEEec
Confidence 458999999 988877765555433467999999987 34455555542 223443 257899999999999865
No 468
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.74 E-value=0.92 Score=43.25 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=29.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 76 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~ 76 (353)
+.+.|+||++.+|..++..|+..|. .|++++++
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G~--~Vv~~~r~ 41 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGA--TVYVTGRS 41 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecc
Confidence 4788999999999999999999887 89999886
No 469
>PRK07411 hypothetical protein; Validated
Probab=94.73 E-value=0.32 Score=48.29 Aligned_cols=33 Identities=24% Similarity=0.515 Sum_probs=30.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
||+|+|+ |-+|+.++..|+..|+ .+|.|+|.+.
T Consensus 40 ~VlivG~-GGlG~~va~~La~~Gv-g~l~lvD~D~ 72 (390)
T PRK07411 40 SVLCIGT-GGLGSPLLLYLAAAGI-GRIGIVDFDV 72 (390)
T ss_pred cEEEECC-CHHHHHHHHHHHHcCC-CEEEEECCCE
Confidence 9999999 9999999999999997 4999999864
No 470
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.69 E-value=0.22 Score=40.57 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=39.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCCcHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNTPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
||+|+|++|.+|..++..|...+.+ +++-+ +.+...+......+.... .....+ ...+++ ..++|+|+++.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~-~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~ 73 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDF-EVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLAL 73 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCc-eEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcC
Confidence 6899998799999999888886433 44444 654322222111221110 001111 113442 35999999974
No 471
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=94.69 E-value=0.13 Score=44.53 Aligned_cols=65 Identities=14% Similarity=0.152 Sum_probs=42.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.++|+|||- |.-|..-|..|...|+ +|+.-..........--++. + + ..+.++|.+.||+|+++.
T Consensus 4 ~k~IAViGy-GsQG~a~AlNLrDSG~--~V~Vglr~~s~s~~~A~~~G-f----~----v~~~~eAv~~aDvV~~L~ 68 (165)
T PF07991_consen 4 GKTIAVIGY-GSQGHAHALNLRDSGV--NVIVGLREGSASWEKAKADG-F----E----VMSVAEAVKKADVVMLLL 68 (165)
T ss_dssp TSEEEEES--SHHHHHHHHHHHHCC---EEEEEE-TTCHHHHHHHHTT------E----CCEHHHHHHC-SEEEE-S
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCC--CEEEEecCCCcCHHHHHHCC-C----e----eccHHHHHhhCCEEEEeC
Confidence 459999999 9999999999999998 77766665532222212221 1 1 135689999999999983
No 472
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=94.67 E-value=0.25 Score=48.17 Aligned_cols=55 Identities=11% Similarity=0.017 Sum_probs=35.6
Q ss_pred HHHHHHHHHhCCCCcEEEEEeCCCcH--H-HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 54 GQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 54 G~~la~~l~~~~~~~el~L~D~~~~~--~-~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
|..+|..|+..|+ +|+++|+++.. . ....+... .++. ++|..+++++||+||++.
T Consensus 32 G~~MA~~La~aG~--~V~v~Dr~~~~l~~~~~~~l~~~----Gi~~---asd~~eaa~~ADvVIlaV 89 (342)
T PRK12557 32 GSRMAIEFAEAGH--DVVLAEPNRSILSEELWKKVEDA----GVKV---VSDDAEAAKHGEIHILFT 89 (342)
T ss_pred HHHHHHHHHhCCC--eEEEEECCHHHhhHHHHHHHHHC----CCEE---eCCHHHHHhCCCEEEEEC
Confidence 6778888888887 99999987621 1 11122221 1232 235567889999999984
No 473
>PF03059 NAS: Nicotianamine synthase protein; InterPro: IPR004298 Nicotianamine synthase 2.5.1.43 from EC catalyzes the trimerization of S-adenosylmethionine to yield one molecule of nicotianamine. Nicotianamine has an important role in plant iron uptake mechanisms. Plants adopt two strategies (termed I and II) of iron acquisition. Strategy I is adopted by all higher plants except graminaceous plants, which adopt strategy II [, ]. In strategy I plants, the role of nicotianamine is not fully determined: possible roles include the formation of more stable complexes with ferrous than with ferric ion, which might serve as a sensor of the physiological status of iron within a plant, or which might be involved in the transport of iron []. In strategy II (graminaceous) plants, nicotianamine is the key intermediate (and nicotianamine synthase the key enzyme) in the synthesis of the mugineic family (the only known family in plants) of phytosiderophores. Phytosiderophores are iron chelators whose secretion by the roots is greatly increased in instances of iron deficiency []. The 3D structures of five example NAS from Methanothermobacter thermautotrophicus reveal the monomer to consist of a five-helical bundle N-terminal domain on top of a classic Rossmann fold C-terminal domain. The N-terminal domain is unique to the NAS family, whereas the C-terminal domain is homologous to the class I family of SAM-dependent methyltransferases. An active site is created at the interface of the two domains, at the rim of a large cavity that corresponds to the nucleotide binding site such as is found in other proteins adopting a Rossmann fold [].; GO: 0030410 nicotianamine synthase activity, 0030418 nicotianamine biosynthetic process; PDB: 3O31_B 3FPH_A 3FPJ_A 3FPE_B 3FPF_B 3FPG_B.
Probab=94.66 E-value=0.16 Score=47.91 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhc--CCCCCeEEEEeCC-CchhhhhCCCcEE
Q 018618 38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISH--MDTGAVVRGFLGQ-PQLENALTGMDLV 113 (353)
Q Consensus 38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~--~~~~~~v~~~~~t-~d~~~al~~ADiV 113 (353)
+..+.||+.||. |.+-.+........+....++-+|+++ +...+..+.. ......+++..+. .+....+++.|+|
T Consensus 118 ~~~p~rVaFIGS-GPLPlT~i~la~~~~~~~~v~~iD~d~~A~~~a~~lv~~~~~L~~~m~f~~~d~~~~~~dl~~~DvV 196 (276)
T PF03059_consen 118 GDPPSRVAFIGS-GPLPLTSIVLAKQHGPGARVHNIDIDPEANELARRLVASDLGLSKRMSFITADVLDVTYDLKEYDVV 196 (276)
T ss_dssp TT---EEEEE----SS-HHHHHHH--HTT--EEEEEESSHHHHHHHHHHHH---HH-SSEEEEES-GGGG-GG----SEE
T ss_pred CcccceEEEEcC-CCcchHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhcccccCCeEEEecchhccccccccCCEE
Confidence 335679999998 999888665554444444789999987 4434433322 1112345544321 2333457899999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEE
Q 018618 114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL 156 (353)
Q Consensus 114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv 156 (353)
++++-+ |++.. -..++.+.+.++. |++.|++
T Consensus 197 ~lAalV----g~~~e--------~K~~Il~~l~~~m~~ga~l~~ 228 (276)
T PF03059_consen 197 FLAALV----GMDAE--------PKEEILEHLAKHMAPGARLVV 228 (276)
T ss_dssp EE-TT-----S------------SHHHHHHHHHHHS-TTSEEEE
T ss_pred EEhhhc----ccccc--------hHHHHHHHHHhhCCCCcEEEE
Confidence 998632 22221 1345555555554 6776654
No 474
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=94.66 E-value=0.23 Score=51.00 Aligned_cols=125 Identities=15% Similarity=0.161 Sum_probs=72.9
Q ss_pred HHHhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCC
Q 018618 13 RISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTG 91 (353)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~ 91 (353)
...+|.|+-. |. -+-++.+..++.||.|+|+ |.+|...+..+...|- +|+.+|.++ ....+..+.-. +
T Consensus 143 ~~aa~~~~~~-----~~-g~~taaG~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA--~V~a~D~~~~rle~aeslGA~-~- 211 (509)
T PRK09424 143 IEAAHEFGRF-----FT-GQITAAGKVPPAKVLVIGA-GVAGLAAIGAAGSLGA--IVRAFDTRPEVAEQVESMGAE-F- 211 (509)
T ss_pred HHHHHHhccc-----CC-CceeccCCcCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCe-E-
Confidence 3445666532 22 3345566778899999999 9999999888888886 799999987 33333332110 0
Q ss_pred CeEEEE-----------eCCCch--------hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 018618 92 AVVRGF-----------LGQPQL--------ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 152 (353)
Q Consensus 92 ~~v~~~-----------~~t~d~--------~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a 152 (353)
..+... ..+.++ .+.++++|+||.+++.|.++.- .-+.++..+.+ .|.+
T Consensus 212 v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP---------~lit~~~v~~m---kpGg 279 (509)
T PRK09424 212 LELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAP---------KLITAEMVASM---KPGS 279 (509)
T ss_pred EEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCc---------chHHHHHHHhc---CCCC
Confidence 001000 001121 1223689999999987642211 00123444443 3888
Q ss_pred EEEEecCC
Q 018618 153 TVNLISNP 160 (353)
Q Consensus 153 ~viv~tNP 160 (353)
.|+.++.+
T Consensus 280 vIVdvg~~ 287 (509)
T PRK09424 280 VIVDLAAE 287 (509)
T ss_pred EEEEEccC
Confidence 88888764
No 475
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.65 E-value=1.1 Score=40.58 Aligned_cols=114 Identities=14% Similarity=0.107 Sum_probs=64.0
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eC---CCchhh-------hhC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LG---QPQLEN-------ALT 108 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~---t~d~~~-------al~ 108 (353)
+.+.|+||++.+|..++..|++.|. +|+++++++ .+....++.... ..+..+ .. ..+.++ .+.
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4789999988999999999999998 899999876 222333333211 111111 11 112211 223
Q ss_pred -CCcEEEEcCCCCCCC----CCCHHH---HHHHHH----HHHHHHHHHHHhhCCCcEEEEecC
Q 018618 109 -GMDLVIIPAGVPRKP----GMTRDD---LFNINA----GIVRTLCEGIAKCCPNATVNLISN 159 (353)
Q Consensus 109 -~ADiVIi~ag~~~~~----g~~r~~---~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN 159 (353)
.-|++|..+|....+ ..+..+ .+..|. ...+...+.+.+....+.|+++|.
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS 144 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS 144 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 689999998742211 122222 223343 334445556655444566666664
No 476
>PRK07877 hypothetical protein; Provisional
Probab=94.60 E-value=0.17 Score=53.99 Aligned_cols=74 Identities=22% Similarity=0.382 Sum_probs=49.9
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----cHHH---------------HHHHhcCCCCCeEEEEeC--
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGV---------------TADISHMDTGAVVRGFLG-- 99 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~~~~---------------~~dl~~~~~~~~v~~~~~-- 99 (353)
.||+|+|+ | +|++++..|+..|.+.+|.|+|-+. ++-+ +..+........+..+..
T Consensus 108 ~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i 185 (722)
T PRK07877 108 LRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGL 185 (722)
T ss_pred CCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 49999999 9 9999999999999877999999865 1111 112222222334444321
Q ss_pred -CCchhhhhCCCcEEEEcC
Q 018618 100 -QPQLENALTGMDLVIIPA 117 (353)
Q Consensus 100 -t~d~~~al~~ADiVIi~a 117 (353)
..+..+-+.++|+||-+.
T Consensus 186 ~~~n~~~~l~~~DlVvD~~ 204 (722)
T PRK07877 186 TEDNVDAFLDGLDVVVEEC 204 (722)
T ss_pred CHHHHHHHhcCCCEEEECC
Confidence 235555678999999873
No 477
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=94.59 E-value=0.072 Score=51.82 Aligned_cols=71 Identities=21% Similarity=0.397 Sum_probs=45.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
++||+|+||+|++|.-+..+|.+.++ ..+|.++-..+..|..+.+.. ..+... ..+. .+++++|+|+++.+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~----~~l~~~--~~~~-~~~~~vD~vFla~p 75 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG----KNLRVR--EVDS-FDFSQVQLAFFAAG 75 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC----cceEEe--eCCh-HHhcCCCEEEEcCC
Confidence 46999999999999999999986543 457777765442232222221 123321 1232 34789999999753
No 478
>PLN00203 glutamyl-tRNA reductase
Probab=94.59 E-value=0.21 Score=51.44 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
..||+|||+ |.+|..++..|...|. .+|++++++... ..+..+. . ..+... ...++.+++.+||+||.+.+
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~-~~V~V~nRs~era~~La~~~~--g--~~i~~~-~~~dl~~al~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGC-TKMVVVNRSEERVAALREEFP--D--VEIIYK-PLDEMLACAAEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHhC--C--CceEee-cHhhHHHHHhcCCEEEEccC
Confidence 569999999 9999999998887774 479999987522 2222221 1 122221 12456688999999998755
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecCCCCch
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNST 164 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNPv~~~ 164 (353)
.+.. = +..+.++.+.+. ...-++|-++.|=|+-
T Consensus 339 s~~p-v------------I~~e~l~~~~~~~~~~~~~~~~IDLAvPRdId 375 (519)
T PLN00203 339 SETP-L------------FLKEHVEALPPASDTVGGKRLFVDISVPRNVG 375 (519)
T ss_pred CCCC-e------------eCHHHHHHhhhcccccCCCeEEEEeCCCCCCc
Confidence 4321 1 112333333211 1224677789997765
No 479
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.56 E-value=0.33 Score=49.28 Aligned_cols=123 Identities=14% Similarity=0.075 Sum_probs=67.7
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.+|.|+|+ |.+|..+|..|.+.|. +|.++|..+. ......+... .+....++ +. +...++|+||++.|
T Consensus 17 ~~v~viG~-G~~G~~~A~~L~~~G~--~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~-~~-~~~~~~D~Vv~s~G 87 (480)
T PRK01438 17 LRVVVAGL-GVSGFAAADALLELGA--RVTVVDDGDDERHRALAAILEAL----GATVRLGP-GP-TLPEDTDLVVTSPG 87 (480)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhhHHHHHHHHHc----CCEEEECC-Cc-cccCCCCEEEECCC
Confidence 48999999 9999999999988887 8999997651 1112224332 12222222 11 23567999999988
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHH--HHHHhhCCCcEEEEecCCC--CchhHHHHHHHHH
Q 018618 119 VPRKPGMTRDDLFNINAGIVRTLC--EGIAKCCPNATVNLISNPV--NSTVPIAAEVFKK 174 (353)
Q Consensus 119 ~~~~~g~~r~~~~~~N~~i~~~i~--~~i~~~~p~a~viv~tNPv--~~~t~~~~~~~~~ 174 (353)
.+..... .......+++++.+.- -.+.+...+..+|-+|=.. ...+.+++.++..
T Consensus 88 i~~~~~~-~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~ 146 (480)
T PRK01438 88 WRPDAPL-LAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRA 146 (480)
T ss_pred cCCCCHH-HHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHH
Confidence 7532211 0111233444543322 1221111234456666444 3555666666644
No 480
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.55 E-value=0.14 Score=49.19 Aligned_cols=95 Identities=18% Similarity=0.237 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
..++|+|+|- |.+|+.+|..+..-|. +|+.+|+.... .. .. .. ..++++.++.||+|++....
T Consensus 121 ~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~--------~~--~~-~~---~~~l~ell~~aDiv~~~lp~ 183 (303)
T PRK06436 121 YNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN--------DG--IS-SI---YMEPEDIMKKSDFVLISLPL 183 (303)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc--------cC--cc-cc---cCCHHHHHhhCCEEEECCCC
Confidence 3469999999 9999999987776677 99999975311 00 00 01 13578889999999997421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST 164 (353)
Q Consensus 120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~ 164 (353)
. +. +-.++. .+.+....|++++|+++ .++|.-
T Consensus 184 t--~~---------T~~li~--~~~l~~mk~ga~lIN~sRG~~vd~~ 217 (303)
T PRK06436 184 T--DE---------TRGMIN--SKMLSLFRKGLAIINVARADVVDKN 217 (303)
T ss_pred C--ch---------hhcCcC--HHHHhcCCCCeEEEECCCccccCHH
Confidence 1 11 111111 23333345789999987 666654
No 481
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.54 E-value=1.9 Score=39.64 Aligned_cols=34 Identities=15% Similarity=0.037 Sum_probs=29.0
Q ss_pred CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
+.+.|+||+ +-+|..++..|++.|. +|++.|+++
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~G~--~v~l~~r~~ 46 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRALGA--ELAVTYLND 46 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence 478889986 3799999999999987 899999875
No 482
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.53 E-value=0.19 Score=43.59 Aligned_cols=55 Identities=27% Similarity=0.465 Sum_probs=40.4
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
.++|+|+|.+..||..++.+|...+. .+.+.+.+ |.++++.++.||+||.++|.|
T Consensus 36 Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~G~~ 90 (160)
T PF02882_consen 36 GKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAVGKP 90 (160)
T ss_dssp T-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-SSST
T ss_pred CCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeeeccc
Confidence 45899999977899999999988865 66665542 246678889999999998866
No 483
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=94.50 E-value=0.2 Score=44.06 Aligned_cols=123 Identities=21% Similarity=0.193 Sum_probs=74.3
Q ss_pred CCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEE----
Q 018618 20 PPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVR---- 95 (353)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~---- 95 (353)
-||||-- |||++. ..-|+||+|.+|+.+...+.+.+.++.++++-++++ -+..+...+.
T Consensus 7 lsklrED-f~mq~~---------s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~-------~d~at~k~v~q~~v 69 (238)
T KOG4039|consen 7 LSKLRED-FRMQNM---------SGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL-------PDPATDKVVAQVEV 69 (238)
T ss_pred hhHHHHH-Hhhhcc---------ceEEEeccccccHHHHHHHHhcccceeEEEEEeccC-------CCccccceeeeEEe
Confidence 3677776 888765 455999999999999999999999999999988751 1111111111
Q ss_pred EEeCCCchhhhhCCCcEEEEcCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618 96 GFLGQPQLENALTGMDLVIIPAGVPR-KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 161 (353)
Q Consensus 96 ~~~~t~d~~~al~~ADiVIi~ag~~~-~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 161 (353)
.+.--.++..++.+-|+.+.+-|.-| +.|-+.. ....-+.+.+.++..++.+=+.++++.|--.
T Consensus 70 Df~Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgf--ykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA 134 (238)
T KOG4039|consen 70 DFSKLSQLATNEQGPDVLFCALGTTRGKAGADGF--YKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA 134 (238)
T ss_pred chHHHHHHHhhhcCCceEEEeecccccccccCce--EeechHHHHHHHHHHHhCCCeEEEEEeccCC
Confidence 11111345677899999998755433 3332211 1111233445555555555455666655433
No 484
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.43 E-value=0.27 Score=49.37 Aligned_cols=123 Identities=24% Similarity=0.311 Sum_probs=70.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH---HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~---~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
.++|.|+|+ |.+|..+|..|+..|. +|+++|.+... ....++... .++.+... ...+...++|+||.++
T Consensus 5 ~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~-~~~~~~~~~d~vv~~~ 76 (450)
T PRK14106 5 GKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGEL----GIELVLGE-YPEEFLEGVDLVVVSP 76 (450)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCEEEeCC-cchhHhhcCCEEEECC
Confidence 358999999 7799999999999998 99999997522 112233321 12222111 1124457899999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC--CchhHHHHHHHHH
Q 018618 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV--NSTVPIAAEVFKK 174 (353)
Q Consensus 118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv--~~~t~~~~~~~~~ 174 (353)
|.+...- .....-..+++++.......+.. + ..+|-+|=.. ...+.+++.++..
T Consensus 77 g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~-~~vI~ITGS~GKTTt~~~l~~iL~~ 132 (450)
T PRK14106 77 GVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K-APIVAITGTNGKTTTTTLLGEIFKN 132 (450)
T ss_pred CCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C-CCEEEEeCCCchHHHHHHHHHHHHH
Confidence 8642111 11111234566665555433322 2 3455665433 3555566565544
No 485
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.40 E-value=0.25 Score=39.31 Aligned_cols=63 Identities=19% Similarity=0.187 Sum_probs=43.5
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
..+|.|||+ |.+|..-+..|+..|- +|.++.... .. .+. ...+.. ..+++.+.++|+|+.+.+
T Consensus 7 ~~~vlVvGg-G~va~~k~~~Ll~~gA--~v~vis~~~---~~--~~~---~i~~~~----~~~~~~l~~~~lV~~at~ 69 (103)
T PF13241_consen 7 GKRVLVVGG-GPVAARKARLLLEAGA--KVTVISPEI---EF--SEG---LIQLIR----REFEEDLDGADLVFAATD 69 (103)
T ss_dssp T-EEEEEEE-SHHHHHHHHHHCCCTB--EEEEEESSE---HH--HHT---SCEEEE----SS-GGGCTTESEEEE-SS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCch---hh--hhh---HHHHHh----hhHHHHHhhheEEEecCC
Confidence 459999999 9999999999999885 999999863 11 111 112221 245577999999998753
No 486
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=94.39 E-value=0.16 Score=50.09 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=45.1
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..++|+|||. |.||+.++..+..-|. ++..+|..... .. . ... ..++++.++.||+|++..
T Consensus 115 ~gktvGIIG~-G~IG~~vA~~l~a~G~--~V~~~dp~~~~------~~-~---~~~----~~~L~ell~~sDiI~lh~ 175 (378)
T PRK15438 115 HDRTVGIVGV-GNVGRRLQARLEALGI--KTLLCDPPRAD------RG-D---EGD----FRSLDELVQEADILTFHT 175 (378)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCcccc------cc-c---ccc----cCCHHHHHhhCCEEEEeC
Confidence 4569999999 9999999999987787 99999964211 00 0 011 135788899999999864
No 487
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.38 E-value=4.2 Score=37.51 Aligned_cols=35 Identities=26% Similarity=0.238 Sum_probs=28.6
Q ss_pred CCeEEEEcC--CCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618 41 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVN 77 (353)
Q Consensus 41 ~~KI~IiGa--~G~vG~~la~~l~~~~~~~el~L~D~~~ 77 (353)
.+.+.|+|| ++-+|..++..|++.|. +|++.++++
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~--~v~~~~~~~ 42 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGA--ELAFTYVVD 42 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCcH
Confidence 347899996 45899999999999988 888887644
No 488
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.36 E-value=0.13 Score=51.45 Aligned_cols=74 Identities=19% Similarity=0.183 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
...||.|+|+ |.+|..++..|...|. .+|.+++++..++ ..|...-....... -.++.+.+.+||+||.+.+.
T Consensus 180 ~~kkvlviGa-G~~a~~va~~L~~~g~-~~I~V~nRt~~ra--~~La~~~~~~~~~~---~~~l~~~l~~aDiVI~aT~a 252 (414)
T PRK13940 180 SSKNVLIIGA-GQTGELLFRHVTALAP-KQIMLANRTIEKA--QKITSAFRNASAHY---LSELPQLIKKADIIIAAVNV 252 (414)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHH--HHHHHHhcCCeEec---HHHHHHHhccCCEEEECcCC
Confidence 4468999999 9999999999988775 3899999875222 22322110011221 14566889999999998776
Q ss_pred C
Q 018618 120 P 120 (353)
Q Consensus 120 ~ 120 (353)
|
T Consensus 253 ~ 253 (414)
T PRK13940 253 L 253 (414)
T ss_pred C
Confidence 5
No 489
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=94.36 E-value=0.1 Score=45.26 Aligned_cols=66 Identities=21% Similarity=0.298 Sum_probs=42.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~ 119 (353)
.++++|+|- |.+|..+|..|...|. .|..+|+++.+.... ..+. -.+. +++++++.+|++|.+.|.
T Consensus 23 Gk~vvV~GY-G~vG~g~A~~lr~~Ga--~V~V~e~DPi~alqA-~~dG---f~v~------~~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 23 GKRVVVIGY-GKVGKGIARALRGLGA--RVTVTEIDPIRALQA-AMDG---FEVM------TLEEALRDADIFVTATGN 88 (162)
T ss_dssp TSEEEEE---SHHHHHHHHHHHHTT---EEEEE-SSHHHHHHH-HHTT----EEE-------HHHHTTT-SEEEE-SSS
T ss_pred CCEEEEeCC-CcccHHHHHHHhhCCC--EEEEEECChHHHHHh-hhcC---cEec------CHHHHHhhCCEEEECCCC
Confidence 357999999 9999999999998887 999999987433211 1221 1222 357899999999987653
No 490
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=94.36 E-value=0.15 Score=50.39 Aligned_cols=61 Identities=21% Similarity=0.245 Sum_probs=45.3
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..++|+|||. |.||+.++..+..-|. +++.+|..... . .. ... + .++++.++.||+|++..
T Consensus 115 ~gktvGIIG~-G~IG~~va~~l~a~G~--~V~~~Dp~~~~---~--~~-----~~~-~---~~l~ell~~aDiV~lh~ 175 (381)
T PRK00257 115 AERTYGVVGA-GHVGGRLVRVLRGLGW--KVLVCDPPRQE---A--EG-----DGD-F---VSLERILEECDVISLHT 175 (381)
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCcccc---c--cc-----Ccc-c---cCHHHHHhhCCEEEEeC
Confidence 3468999999 9999999999988787 99999975311 0 00 011 1 25778889999999974
No 491
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.36 E-value=0.26 Score=46.71 Aligned_cols=75 Identities=20% Similarity=0.280 Sum_probs=47.2
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
+.+++.|+|| |-.|.++++.|+..|. .+|.++|++. ++.++.++........+... ...++++.+.++|+||.+.
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~-~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~-~~~~~~~~~~~~divINaT 202 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGV-QKLQVADLDTSRAQALADVINNAVGREAVVGV-DARGIEDVIAAADGVVNAT 202 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHhhccCcceEEec-CHhHHHHHHhhcCEEEEcC
Confidence 3468999999 9999999999988775 4899999876 33333333221111112221 1112234567899999975
No 492
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.33 E-value=0.074 Score=51.89 Aligned_cols=71 Identities=24% Similarity=0.506 Sum_probs=47.0
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCC-C-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 118 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~-~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag 118 (353)
.+||+|+||+|.+|..+...|...+ + ..+|.++......|....+.. ..+... ..|. +.+.++|+|+++++
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~----~~l~v~--~~~~-~~~~~~Divf~a~~ 77 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG----REIIIQ--EAKI-NSFEGVDIAFFSAG 77 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC----cceEEE--eCCH-HHhcCCCEEEECCC
Confidence 4699999999999999999998554 3 356888876553333332221 123332 1243 56789999999764
No 493
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.
Probab=94.30 E-value=0.29 Score=45.38 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=29.1
Q ss_pred CeEEEEcCCCCcHHHHHHHHHhCCC---------CcEEEEEeCCC
Q 018618 42 FKVAILGAAGGIGQPLAMLMKINPL---------VSVLHLYDVVN 77 (353)
Q Consensus 42 ~KI~IiGa~G~vG~~la~~l~~~~~---------~~el~L~D~~~ 77 (353)
.||.|||+ |-+|+.++..|+..|+ ..+|+++|.+.
T Consensus 12 ~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~ 55 (244)
T TIGR03736 12 VSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDT 55 (244)
T ss_pred CeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCE
Confidence 39999999 9999999999988642 12999999764
No 494
>PLN02306 hydroxypyruvate reductase
Probab=94.28 E-value=0.28 Score=48.64 Aligned_cols=101 Identities=20% Similarity=0.244 Sum_probs=58.1
Q ss_pred CCeEEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCCcHHHH---HHHhc---CCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618 41 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVT---ADISH---MDTGAVVRGFLGQPQLENALTGMDLV 113 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~~~~~~---~dl~~---~~~~~~v~~~~~t~d~~~al~~ADiV 113 (353)
.++|+|+|. |.+|+.+|..+. .-|. +|..||........ ..+.. .......... ...++++.++.||+|
T Consensus 165 gktvGIiG~-G~IG~~vA~~l~~~fGm--~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~L~ell~~sDiV 240 (386)
T PLN02306 165 GQTVGVIGA-GRIGSAYARMMVEGFKM--NLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWK-RASSMEEVLREADVI 240 (386)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCCchhhhhhhhhhccccccccccccccc-ccCCHHHHHhhCCEE
Confidence 469999999 999999999875 4455 99999976421111 01110 0000011111 124788999999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
++.... .+ ++-.++.. +.+...-|++++|+++
T Consensus 241 ~lh~Pl--t~---------~T~~lin~--~~l~~MK~ga~lIN~a 272 (386)
T PLN02306 241 SLHPVL--DK---------TTYHLINK--ERLALMKKEAVLVNAS 272 (386)
T ss_pred EEeCCC--Ch---------hhhhhcCH--HHHHhCCCCeEEEECC
Confidence 996421 11 11111111 2333344789999987
No 495
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=94.28 E-value=0.12 Score=50.50 Aligned_cols=34 Identities=32% Similarity=0.379 Sum_probs=26.9
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEE-EEEeC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVL-HLYDV 75 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el-~L~D~ 75 (353)
++||+|+||+|.+|..++..|...+.. ++ .+.|.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~-elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEV-EIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEECc
Confidence 469999999999999999988876544 55 55663
No 496
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.23 E-value=0.62 Score=42.04 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=26.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCC
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVV 76 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~ 76 (353)
.+.|+||+|++|++++..|++.|. ++++. +.+
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g~--~v~~~~~~~ 35 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEGY--TVAVNYQQN 35 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCC
Confidence 689999999999999999998887 77664 443
No 497
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.22 E-value=0.6 Score=39.48 Aligned_cols=115 Identities=18% Similarity=0.173 Sum_probs=71.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeC-CCch----------hhhh
Q 018618 43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLG-QPQL----------ENAL 107 (353)
Q Consensus 43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~-t~d~----------~~al 107 (353)
.+.|+||+|.+|..++..|++.|. ..+++++.++ ......++.... ..+..+.. .++. .+..
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA-RVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT-EEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc-eEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 588999999999999999998843 2788888872 223333444222 33333211 1111 1234
Q ss_pred CCCcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618 108 TGMDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 161 (353)
Q Consensus 108 ~~ADiVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 161 (353)
..-|++|..+|...... + .....+..|+.....+.+.+.. .+.+.++++|...
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~ 137 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIA 137 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGG
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchh
Confidence 58899999988765211 1 1234566777666677777766 4577777776543
No 498
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.18 E-value=0.14 Score=48.65 Aligned_cols=76 Identities=18% Similarity=0.326 Sum_probs=50.8
Q ss_pred CCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe
Q 018618 19 YPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL 98 (353)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~ 98 (353)
+-||.-.++.+.-..... ..+..+|+|+|++|.+|..++..|...+. +|.+++..
T Consensus 138 ~~p~T~~gii~~L~~~~i-~l~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~---------------------- 192 (283)
T PRK14192 138 YGSATPAGIMRLLKAYNI-ELAGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR---------------------- 192 (283)
T ss_pred ccCCcHHHHHHHHHHcCC-CCCCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC----------------------
Confidence 334444444443222211 23346999999944599999999988876 88888741
Q ss_pred CCCchhhhhCCCcEEEEcCCCC
Q 018618 99 GQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 99 ~t~d~~~al~~ADiVIi~ag~~ 120 (353)
+.++.+.+++||+||.+.|.|
T Consensus 193 -t~~L~~~~~~aDIvI~AtG~~ 213 (283)
T PRK14192 193 -TQNLPELVKQADIIVGAVGKP 213 (283)
T ss_pred -chhHHHHhccCCEEEEccCCC
Confidence 134556779999999998644
No 499
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.17 E-value=0.28 Score=47.50 Aligned_cols=91 Identities=22% Similarity=0.272 Sum_probs=57.8
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~ 120 (353)
.++++|+|. |.+|+.+|..+. ++.-+|+.+|+.+. ....+... .+. .++++.++.||+|++.+..-
T Consensus 146 gktvGIiG~-GrIG~avA~r~~--~Fgm~v~y~~~~~~-~~~~~~~~------~~y----~~l~ell~~sDii~l~~Plt 211 (324)
T COG1052 146 GKTLGIIGL-GRIGQAVARRLK--GFGMKVLYYDRSPN-PEAEKELG------ARY----VDLDELLAESDIISLHCPLT 211 (324)
T ss_pred CCEEEEECC-CHHHHHHHHHHh--cCCCEEEEECCCCC-hHHHhhcC------cee----ccHHHHHHhCCEEEEeCCCC
Confidence 469999999 999999999998 54449999998763 11111111 111 13678899999999975321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158 (353)
Q Consensus 121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 158 (353)
.+|-.++. .+.+.+..|++++||.+
T Consensus 212 -----------~~T~hLin--~~~l~~mk~ga~lVNta 236 (324)
T COG1052 212 -----------PETRHLIN--AEELAKMKPGAILVNTA 236 (324)
T ss_pred -----------hHHhhhcC--HHHHHhCCCCeEEEECC
Confidence 11111111 12334445789998886
No 500
>PRK06046 alanine dehydrogenase; Validated
Probab=94.17 E-value=0.21 Score=48.38 Aligned_cols=71 Identities=18% Similarity=0.254 Sum_probs=49.3
Q ss_pred CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618 41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117 (353)
Q Consensus 41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a 117 (353)
..+|+|||+ |..|...+..+.....+.++.++|++. .+..+.++.+. ....+... ++++++++ +|+|+++.
T Consensus 129 ~~~vgiiG~-G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~-~~~~v~~~---~~~~~~l~-aDiVv~aT 201 (326)
T PRK06046 129 SKVVGIIGA-GNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSV-VGCDVTVA---EDIEEACD-CDILVTTT 201 (326)
T ss_pred CCEEEEECC-cHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhh-cCceEEEe---CCHHHHhh-CCEEEEec
Confidence 348999999 999998888777555567999999987 33334444422 12234432 46778887 99999974
Done!