Query 018619
Match_columns 353
No_of_seqs 267 out of 2496
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 02:37:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018619.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018619hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0658 Glycogen synthase kina 100.0 1.5E-73 3.3E-78 485.9 26.4 342 10-352 23-364 (364)
2 KOG0593 Predicted protein kina 100.0 7E-64 1.5E-68 415.4 18.9 280 11-301 2-291 (396)
3 KOG0660 Mitogen-activated prot 100.0 3.5E-63 7.6E-68 421.8 23.1 322 7-341 18-351 (359)
4 KOG0661 MAPK related serine/th 100.0 4.6E-64 1E-68 439.3 15.2 288 4-301 3-298 (538)
5 KOG0659 Cdk activating kinase 100.0 3.3E-61 7.1E-66 392.8 22.5 277 11-300 2-287 (318)
6 KOG0615 Serine/threonine prote 100.0 1.5E-61 3.3E-66 416.7 14.8 257 9-300 170-443 (475)
7 KOG0663 Protein kinase PITSLRE 100.0 7.9E-60 1.7E-64 396.1 22.1 283 10-300 75-367 (419)
8 KOG0575 Polo-like serine/threo 100.0 1.5E-59 3.2E-64 423.4 24.2 248 11-299 18-274 (592)
9 PTZ00036 glycogen synthase kin 100.0 2E-58 4.4E-63 430.8 31.5 329 10-339 65-398 (440)
10 KOG0600 Cdc2-related protein k 100.0 1.4E-59 3.1E-64 413.9 21.6 282 8-298 114-404 (560)
11 KOG0592 3-phosphoinositide-dep 100.0 8.5E-59 1.8E-63 412.3 21.7 258 9-307 71-351 (604)
12 KOG0598 Ribosomal protein S6 k 100.0 1.6E-58 3.5E-63 394.7 20.6 259 7-304 21-291 (357)
13 KOG0581 Mitogen-activated prot 100.0 2.4E-58 5.1E-63 393.8 19.4 255 11-304 79-345 (364)
14 KOG0594 Protein kinase PCTAIRE 100.0 3.8E-56 8.3E-61 379.8 23.8 290 10-303 10-311 (323)
15 KOG0616 cAMP-dependent protein 100.0 7.9E-57 1.7E-61 372.4 18.3 254 8-303 41-306 (355)
16 KOG0605 NDR and related serine 100.0 2.6E-56 5.6E-61 396.5 21.4 270 8-315 138-466 (550)
17 KOG0588 Serine/threonine prote 100.0 6.7E-56 1.4E-60 401.8 21.1 254 11-304 12-273 (786)
18 KOG0667 Dual-specificity tyros 100.0 3.3E-54 7.1E-59 392.7 26.1 280 11-301 186-509 (586)
19 KOG0591 NIMA (never in mitosis 100.0 1.1E-56 2.3E-61 369.1 8.8 254 11-302 19-284 (375)
20 KOG0595 Serine/threonine-prote 100.0 4.8E-55 1E-59 376.8 19.2 254 9-299 8-273 (429)
21 KOG0583 Serine/threonine prote 100.0 2.8E-54 6.1E-59 389.2 23.6 253 8-299 14-280 (370)
22 KOG0694 Serine/threonine prote 100.0 1.7E-54 3.8E-59 395.0 22.3 257 7-304 364-634 (694)
23 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-56 3.6E-61 361.3 6.9 258 6-299 6-272 (355)
24 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.8E-52 6.1E-57 369.9 27.3 277 10-297 4-288 (288)
25 KOG0585 Ca2+/calmodulin-depend 100.0 2.4E-53 5.2E-58 371.8 17.6 256 9-300 95-378 (576)
26 KOG0198 MEKK and related serin 100.0 2.8E-53 6.1E-58 368.3 17.8 259 10-302 16-284 (313)
27 KOG0582 Ste20-like serine/thre 100.0 2.8E-52 6.1E-57 362.8 22.8 271 5-303 20-302 (516)
28 KOG0597 Serine-threonine prote 100.0 2.7E-53 5.8E-58 378.4 15.7 249 11-300 2-257 (808)
29 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.8E-51 3.9E-56 367.5 25.9 283 9-301 3-295 (303)
30 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.9E-51 6.2E-56 371.8 27.3 318 12-338 1-332 (338)
31 KOG0578 p21-activated serine/t 100.0 5.2E-52 1.1E-56 371.6 18.6 251 10-299 272-528 (550)
32 KOG0610 Putative serine/threon 100.0 1.4E-51 3E-56 355.6 20.3 275 7-317 73-415 (459)
33 KOG0662 Cyclin-dependent kinas 100.0 1.1E-51 2.3E-56 319.2 17.3 279 11-300 2-289 (292)
34 cd07848 STKc_CDKL5 Catalytic d 100.0 1.9E-50 4.1E-55 358.1 26.9 276 11-297 1-287 (287)
35 KOG0599 Phosphorylase kinase g 100.0 9.1E-53 2E-57 344.7 9.8 258 11-304 17-293 (411)
36 cd07862 STKc_CDK6 Catalytic do 100.0 3.6E-50 7.9E-55 356.8 26.7 280 11-297 1-290 (290)
37 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.8E-50 8.2E-55 359.9 26.6 285 9-304 4-296 (309)
38 cd07875 STKc_JNK1 Catalytic do 100.0 1.2E-49 2.6E-54 364.6 29.5 288 9-305 22-329 (364)
39 cd07876 STKc_JNK2 Catalytic do 100.0 3.5E-50 7.5E-55 367.4 25.7 285 9-303 19-324 (359)
40 KOG0032 Ca2+/calmodulin-depend 100.0 2.2E-50 4.8E-55 363.7 23.8 257 9-302 33-301 (382)
41 cd07863 STKc_CDK4 Catalytic do 100.0 1.4E-49 2.9E-54 352.7 27.4 279 12-297 1-288 (288)
42 cd07853 STKc_NLK Catalytic dom 100.0 8.4E-50 1.8E-54 366.5 26.5 284 12-301 1-295 (372)
43 cd07874 STKc_JNK3 Catalytic do 100.0 1.2E-49 2.5E-54 363.5 27.1 286 9-303 15-320 (355)
44 cd05612 STKc_PRKX_like Catalyt 100.0 2.8E-50 6.1E-55 357.6 21.8 250 11-303 1-263 (291)
45 PTZ00263 protein kinase A cata 100.0 6.5E-50 1.4E-54 361.2 23.4 253 8-303 15-280 (329)
46 KOG0580 Serine/threonine prote 100.0 4.9E-51 1.1E-55 328.5 13.9 255 6-300 17-279 (281)
47 KOG0666 Cyclin C-dependent kin 100.0 5.2E-51 1.1E-55 339.9 13.8 284 11-300 24-343 (438)
48 cd05571 STKc_PKB Catalytic dom 100.0 5.8E-50 1.3E-54 360.7 21.5 246 17-303 1-260 (323)
49 cd05631 STKc_GRK4 Catalytic do 100.0 2.1E-49 4.5E-54 351.0 23.8 257 12-303 1-270 (285)
50 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.4E-49 1.6E-53 350.2 27.2 283 10-303 5-295 (301)
51 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.5E-49 7.5E-54 358.8 25.3 285 10-304 14-308 (343)
52 KOG0611 Predicted serine/threo 100.0 1.1E-50 2.4E-55 349.0 14.2 248 10-298 52-307 (668)
53 KOG4717 Serine/threonine prote 100.0 4.2E-50 9E-55 354.5 17.1 257 10-304 17-280 (864)
54 PHA03212 serine/threonine kina 100.0 3.1E-49 6.7E-54 363.5 22.7 278 8-301 89-383 (391)
55 cd05628 STKc_NDR1 Catalytic do 100.0 5E-49 1.1E-53 360.1 23.4 256 11-304 1-303 (363)
56 cd05599 STKc_NDR_like Catalyti 100.0 3.3E-49 7.2E-54 361.8 22.1 255 11-303 1-305 (364)
57 PTZ00426 cAMP-dependent protei 100.0 4.2E-49 9.2E-54 356.8 21.9 253 8-303 27-293 (340)
58 cd07839 STKc_CDK5 Catalytic do 100.0 2.8E-48 6E-53 343.6 25.6 275 12-297 1-284 (284)
59 KOG0604 MAP kinase-activated p 100.0 4.2E-50 9.1E-55 332.9 12.9 263 9-302 59-330 (400)
60 cd07868 STKc_CDK8 Catalytic do 100.0 2.6E-48 5.7E-53 349.3 25.5 278 16-297 6-317 (317)
61 cd05626 STKc_LATS2 Catalytic d 100.0 1.4E-48 3E-53 359.4 24.1 255 12-303 2-314 (381)
62 cd05629 STKc_NDR_like_fungal C 100.0 6.7E-49 1.5E-53 361.2 21.9 254 11-302 1-313 (377)
63 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-48 2.7E-53 353.6 23.1 257 11-302 1-265 (333)
64 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-48 2.5E-53 360.2 22.5 254 12-303 2-314 (382)
65 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.5E-49 2.1E-53 356.9 21.6 255 11-303 1-294 (350)
66 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-48 4.1E-53 349.2 22.1 242 19-301 1-254 (312)
67 cd05593 STKc_PKB_gamma Catalyt 100.0 1.6E-48 3.4E-53 351.9 21.3 245 17-302 1-259 (328)
68 cd05621 STKc_ROCK2 Catalytic d 100.0 5.9E-48 1.3E-52 353.1 24.8 258 8-302 40-312 (370)
69 cd05596 STKc_ROCK Catalytic do 100.0 4.2E-48 9.2E-53 354.4 23.7 259 7-302 39-312 (370)
70 cd05598 STKc_LATS Catalytic do 100.0 9.6E-49 2.1E-53 360.1 19.4 254 11-302 1-309 (376)
71 cd05595 STKc_PKB_beta Catalyti 100.0 2E-48 4.3E-53 350.6 20.6 245 17-302 1-259 (323)
72 PTZ00284 protein kinase; Provi 100.0 8.5E-48 1.9E-52 362.9 25.6 280 10-303 128-447 (467)
73 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.9E-47 4E-52 346.5 26.8 319 10-339 4-332 (337)
74 cd05601 STKc_CRIK Catalytic do 100.0 2.6E-48 5.7E-53 351.1 21.1 257 11-303 1-272 (330)
75 cd07849 STKc_ERK1_2_like Catal 100.0 2.1E-47 4.6E-52 346.0 27.0 287 9-303 3-301 (336)
76 cd05590 STKc_nPKC_eta Catalyti 100.0 4.8E-48 1.1E-52 347.6 22.4 245 17-302 1-261 (320)
77 cd07861 STKc_CDK1_euk Catalyti 100.0 1.4E-47 3E-52 339.3 24.9 276 12-297 1-285 (285)
78 cd05587 STKc_cPKC Catalytic do 100.0 6.9E-48 1.5E-52 347.4 23.2 250 12-302 1-265 (324)
79 KOG0612 Rho-associated, coiled 100.0 1.8E-49 3.9E-54 378.1 13.4 270 8-314 72-358 (1317)
80 cd05589 STKc_PKN Catalytic dom 100.0 8.5E-48 1.9E-52 346.8 23.1 248 13-302 1-265 (324)
81 KOG0589 Serine/threonine prote 100.0 6.5E-49 1.4E-53 349.5 15.4 254 10-300 3-264 (426)
82 cd05594 STKc_PKB_alpha Catalyt 100.0 3.9E-48 8.5E-53 349.1 20.0 247 17-303 1-261 (325)
83 cd07850 STKc_JNK Catalytic dom 100.0 5.1E-47 1.1E-51 345.7 27.2 287 8-303 13-320 (353)
84 cd05591 STKc_nPKC_epsilon Cata 100.0 1E-47 2.3E-52 345.8 22.1 246 17-303 1-263 (321)
85 cd05608 STKc_GRK1 Catalytic do 100.0 1.6E-47 3.4E-52 338.1 22.6 252 19-303 1-266 (280)
86 cd05614 STKc_MSK2_N N-terminal 100.0 1E-47 2.2E-52 347.6 21.8 255 12-302 1-275 (332)
87 cd05605 STKc_GRK4_like Catalyt 100.0 3E-47 6.6E-52 337.2 24.2 257 12-303 1-270 (285)
88 KOG0192 Tyrosine kinase specif 100.0 2.5E-47 5.5E-52 341.0 23.6 250 6-292 36-297 (362)
89 cd05616 STKc_cPKC_beta Catalyt 100.0 1.8E-47 4E-52 344.5 22.7 251 12-303 1-266 (323)
90 cd05627 STKc_NDR2 Catalytic do 100.0 9.7E-48 2.1E-52 351.4 20.8 255 11-303 1-302 (360)
91 KOG0690 Serine/threonine prote 100.0 4.9E-49 1.1E-53 330.1 11.1 256 9-304 166-434 (516)
92 cd07837 STKc_CdkB_plant Cataly 100.0 9.9E-47 2.1E-51 335.5 26.7 286 11-298 1-295 (295)
93 PHA03209 serine/threonine kina 100.0 1.7E-47 3.7E-52 349.0 22.1 280 8-300 63-357 (357)
94 cd07845 STKc_CDK10 Catalytic d 100.0 8.6E-47 1.9E-51 338.2 26.3 283 9-300 5-296 (309)
95 cd05570 STKc_PKC Catalytic dom 100.0 2.1E-47 4.6E-52 343.2 22.2 245 17-302 1-260 (318)
96 cd05622 STKc_ROCK1 Catalytic d 100.0 4.6E-47 9.9E-52 347.5 24.7 257 8-301 40-311 (371)
97 cd06649 PKc_MEK2 Catalytic dom 100.0 4.4E-47 9.5E-52 343.1 24.2 277 8-300 2-307 (331)
98 cd05620 STKc_nPKC_delta Cataly 100.0 2.2E-47 4.8E-52 342.8 22.1 245 17-302 1-256 (316)
99 cd05597 STKc_DMPK_like Catalyt 100.0 6.4E-47 1.4E-51 341.9 25.1 259 11-303 1-275 (331)
100 KOG0201 Serine/threonine prote 100.0 1.9E-49 4.2E-54 344.7 8.2 251 9-299 11-268 (467)
101 cd07867 STKc_CDC2L6 Catalytic 100.0 9.5E-47 2.1E-51 339.1 25.9 278 16-297 6-317 (317)
102 cd05588 STKc_aPKC Catalytic do 100.0 3.7E-47 8E-52 343.2 22.5 246 17-302 1-270 (329)
103 cd05584 STKc_p70S6K Catalytic 100.0 3.4E-47 7.3E-52 342.7 22.2 246 16-302 1-264 (323)
104 cd05575 STKc_SGK Catalytic dom 100.0 1.7E-47 3.6E-52 344.7 20.1 245 17-302 1-259 (323)
105 cd05592 STKc_nPKC_theta_delta 100.0 4.5E-47 9.8E-52 340.7 22.4 245 17-302 1-256 (316)
106 cd07832 STKc_CCRK Catalytic do 100.0 1.5E-46 3.3E-51 332.7 25.5 276 12-298 1-286 (286)
107 cd07847 STKc_CDKL1_4 Catalytic 100.0 4E-46 8.6E-51 330.1 27.8 276 11-297 1-286 (286)
108 KOG0986 G protein-coupled rece 100.0 3.6E-48 7.7E-53 337.5 14.0 262 8-305 182-457 (591)
109 KOG0671 LAMMER dual specificit 100.0 4.5E-48 9.8E-53 330.8 13.8 283 8-301 86-413 (415)
110 cd05619 STKc_nPKC_theta Cataly 100.0 6.8E-47 1.5E-51 339.5 22.2 246 17-303 1-257 (316)
111 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-46 2.9E-51 340.1 24.2 259 11-303 1-275 (332)
112 cd07831 STKc_MOK Catalytic dom 100.0 2.8E-46 6E-51 330.4 25.6 275 13-297 1-282 (282)
113 cd05604 STKc_SGK3 Catalytic do 100.0 2.4E-47 5.1E-52 344.0 18.8 245 17-302 1-259 (325)
114 cd07843 STKc_CDC2L1 Catalytic 100.0 2.2E-46 4.9E-51 333.0 24.8 280 10-297 4-293 (293)
115 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-46 2.7E-51 338.9 23.3 250 12-302 1-265 (323)
116 cd05618 STKc_aPKC_iota Catalyt 100.0 8E-47 1.7E-51 340.9 21.9 246 17-302 1-270 (329)
117 PTZ00283 serine/threonine prot 100.0 1.8E-46 3.8E-51 354.5 24.8 263 8-301 29-304 (496)
118 cd07855 STKc_ERK5 Catalytic do 100.0 3.1E-46 6.8E-51 338.1 25.2 288 10-305 4-305 (334)
119 PHA03211 serine/threonine kina 100.0 2E-46 4.4E-51 349.1 24.6 278 7-299 165-460 (461)
120 PHA03207 serine/threonine kina 100.0 1.1E-46 2.3E-51 347.9 22.6 280 8-300 89-381 (392)
121 cd05582 STKc_RSK_N N-terminal 100.0 3.5E-47 7.6E-52 342.0 18.7 245 17-302 2-262 (318)
122 cd07844 STKc_PCTAIRE_like Cata 100.0 6.9E-46 1.5E-50 329.5 26.8 277 10-297 4-291 (291)
123 KOG2345 Serine/threonine prote 100.0 2.4E-47 5.2E-52 308.7 15.3 261 7-294 17-296 (302)
124 cd05586 STKc_Sck1_like Catalyt 100.0 5.7E-47 1.2E-51 342.3 19.2 244 19-301 1-260 (330)
125 cd05624 STKc_MRCK_beta Catalyt 100.0 2.9E-46 6.3E-51 337.7 23.6 259 11-303 1-275 (331)
126 PLN00009 cyclin-dependent kina 100.0 9.1E-46 2E-50 329.2 26.5 281 11-301 2-291 (294)
127 cd07841 STKc_CDK7 Catalytic do 100.0 1.1E-45 2.4E-50 329.3 26.9 279 12-301 1-289 (298)
128 KOG0668 Casein kinase II, alph 100.0 6.9E-48 1.5E-52 308.6 11.2 284 9-303 36-331 (338)
129 cd07860 STKc_CDK2_3 Catalytic 100.0 3.4E-46 7.3E-51 330.3 23.3 275 12-297 1-284 (284)
130 KOG0669 Cyclin T-dependent kin 100.0 1.3E-48 2.8E-53 316.9 6.7 287 8-299 14-320 (376)
131 PF00069 Pkinase: Protein kina 100.0 1.7E-46 3.6E-51 327.7 20.4 252 13-297 1-260 (260)
132 cd05602 STKc_SGK1 Catalytic do 100.0 1.8E-46 3.8E-51 338.4 21.0 245 17-302 1-259 (325)
133 cd05630 STKc_GRK6 Catalytic do 100.0 6.8E-46 1.5E-50 328.5 24.3 257 12-303 1-270 (285)
134 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-45 2.3E-50 335.5 25.7 286 10-302 4-308 (342)
135 PTZ00267 NIMA-related protein 100.0 3.7E-46 8.1E-51 352.0 23.6 254 11-300 67-329 (478)
136 PLN00034 mitogen-activated pro 100.0 2.5E-46 5.3E-51 341.2 21.5 254 10-302 73-336 (353)
137 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.8E-46 1E-50 335.7 22.7 247 17-303 1-269 (327)
138 cd07851 STKc_p38 Catalytic dom 100.0 1.7E-45 3.8E-50 334.3 26.4 317 9-340 13-339 (343)
139 cd05603 STKc_SGK2 Catalytic do 100.0 2.4E-46 5.1E-51 337.0 20.5 245 17-302 1-259 (321)
140 PTZ00266 NIMA-related protein 100.0 7.3E-46 1.6E-50 362.1 25.5 265 8-303 10-304 (1021)
141 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-45 2.7E-50 331.6 25.0 282 12-297 1-316 (316)
142 cd05607 STKc_GRK7 Catalytic do 100.0 6.9E-46 1.5E-50 327.1 22.5 251 19-303 1-263 (277)
143 cd07834 STKc_MAPK Catalytic do 100.0 1.2E-45 2.6E-50 333.9 24.5 288 12-306 1-301 (330)
144 cd07836 STKc_Pho85 Catalytic d 100.0 1.8E-45 3.9E-50 325.6 25.2 276 12-297 1-284 (284)
145 cd06650 PKc_MEK1 Catalytic dom 100.0 5E-46 1.1E-50 336.3 22.0 281 8-300 2-305 (333)
146 KOG0665 Jun-N-terminal kinase 100.0 6.8E-47 1.5E-51 316.6 14.9 320 8-340 14-353 (369)
147 cd07857 STKc_MPK1 Catalytic do 100.0 2.7E-45 5.9E-50 331.7 26.5 287 12-306 1-304 (332)
148 cd07865 STKc_CDK9 Catalytic do 100.0 3.8E-45 8.2E-50 327.6 26.8 283 10-297 11-310 (310)
149 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.8E-45 1E-49 324.1 27.0 278 10-297 4-291 (291)
150 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.2E-45 4.8E-50 324.9 23.7 257 11-301 1-268 (283)
151 cd06625 STKc_MEKK3_like Cataly 100.0 2.2E-45 4.7E-50 321.4 22.9 248 11-297 2-263 (263)
152 cd05632 STKc_GRK5 Catalytic do 100.0 3.8E-45 8.2E-50 323.8 24.4 257 12-303 1-270 (285)
153 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.2E-45 9.2E-50 323.6 24.8 277 11-297 1-286 (286)
154 cd07866 STKc_BUR1 Catalytic do 100.0 9.5E-45 2.1E-49 325.1 26.8 281 10-297 7-311 (311)
155 KOG4236 Serine/threonine prote 100.0 5.3E-47 1.2E-51 335.7 11.9 249 16-300 569-825 (888)
156 cd07833 STKc_CDKL Catalytic do 100.0 6.4E-45 1.4E-49 322.7 25.3 277 11-297 1-288 (288)
157 KOG0596 Dual specificity; seri 100.0 7E-46 1.5E-50 330.3 18.8 255 8-299 358-632 (677)
158 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.9E-44 4.1E-49 327.7 28.6 286 9-304 15-310 (345)
159 cd07879 STKc_p38delta_MAPK13 C 100.0 2E-44 4.4E-49 327.1 28.7 284 10-304 14-307 (342)
160 cd05118 STKc_CMGC Catalytic do 100.0 4.5E-45 9.6E-50 322.8 23.4 274 13-297 1-283 (283)
161 PTZ00024 cyclin-dependent prot 100.0 5.9E-45 1.3E-49 329.9 24.7 280 9-302 6-321 (335)
162 cd06639 STKc_myosinIIIB Cataly 100.0 1.2E-44 2.5E-49 321.7 26.0 261 10-298 21-291 (291)
163 KOG0696 Serine/threonine prote 100.0 2E-46 4.3E-51 323.4 13.5 257 8-304 346-616 (683)
164 cd07852 STKc_MAPK15 Catalytic 100.0 5.6E-45 1.2E-49 330.3 23.5 287 9-306 5-307 (337)
165 cd07835 STKc_CDK1_like Catalyt 100.0 1E-44 2.2E-49 320.7 24.2 274 13-297 1-283 (283)
166 cd05574 STKc_phototropin_like 100.0 1.3E-44 2.8E-49 325.1 25.2 260 11-307 1-302 (316)
167 cd05580 STKc_PKA Catalytic dom 100.0 8.3E-45 1.8E-49 322.4 23.2 250 11-303 1-263 (290)
168 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.4E-45 1.2E-49 330.6 22.4 254 6-293 2-329 (338)
169 cd06638 STKc_myosinIIIA Cataly 100.0 1.6E-44 3.4E-49 320.0 24.4 261 9-297 16-286 (286)
170 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.3E-44 5E-49 326.8 25.8 285 9-303 13-307 (343)
171 cd06637 STKc_TNIK Catalytic do 100.0 1.4E-44 3E-49 317.9 22.6 257 10-297 5-272 (272)
172 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-44 3.6E-49 320.8 23.1 262 6-303 7-278 (292)
173 cd07840 STKc_CDK9_like Catalyt 100.0 1.7E-44 3.7E-49 319.7 23.1 277 13-297 1-287 (287)
174 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-44 3E-49 326.4 22.6 277 15-301 2-314 (327)
175 cd07864 STKc_CDK12 Catalytic d 100.0 5.3E-44 1.2E-48 319.0 26.0 283 9-297 5-302 (302)
176 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.4E-44 3E-49 320.4 21.9 260 11-303 1-271 (286)
177 KOG0586 Serine/threonine prote 100.0 1.4E-45 3E-50 333.3 15.5 257 8-303 53-315 (596)
178 cd06608 STKc_myosinIII_like Ca 100.0 3.2E-44 7E-49 315.8 23.8 260 10-297 5-275 (275)
179 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.6E-44 1.2E-48 322.2 25.7 283 8-304 7-298 (328)
180 KOG1989 ARK protein kinase fam 100.0 3.5E-45 7.7E-50 343.6 18.3 252 7-293 33-306 (738)
181 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-43 2.5E-48 309.4 26.4 249 12-297 1-257 (257)
182 cd07830 STKc_MAK_like Catalyti 100.0 4.5E-44 9.7E-49 316.5 24.0 275 13-297 1-283 (283)
183 KOG0579 Ste20-like serine/thre 100.0 2.7E-46 5.8E-51 337.5 9.8 256 10-300 31-295 (1187)
184 KOG0607 MAP kinase-interacting 100.0 2.1E-45 4.5E-50 307.5 14.4 253 16-303 83-370 (463)
185 KOG0603 Ribosomal protein S6 k 100.0 3.7E-45 8E-50 332.2 17.2 246 9-297 320-566 (612)
186 KOG0577 Serine/threonine prote 100.0 1E-45 2.2E-50 331.4 13.1 248 12-299 27-283 (948)
187 cd06609 STKc_MST3_like Catalyt 100.0 2.2E-44 4.7E-49 317.1 21.5 250 11-301 1-258 (274)
188 cd06619 PKc_MKK5 Catalytic dom 100.0 1.7E-44 3.6E-49 318.7 20.6 252 11-301 1-260 (279)
189 cd06611 STKc_SLK_like Catalyti 100.0 2.7E-44 6E-49 317.5 22.0 255 10-300 4-268 (280)
190 cd07838 STKc_CDK4_6_like Catal 100.0 1.6E-43 3.4E-48 313.6 26.8 278 13-297 1-287 (287)
191 cd07829 STKc_CDK_like Catalyti 100.0 7.5E-44 1.6E-48 314.8 24.6 274 13-297 1-282 (282)
192 cd06616 PKc_MKK4 Catalytic dom 100.0 1.9E-44 4.2E-49 319.7 20.7 266 9-303 2-276 (288)
193 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.7E-44 1.2E-48 312.9 23.4 256 11-297 1-267 (267)
194 KOG0574 STE20-like serine/thre 100.0 3.6E-47 7.7E-52 316.0 2.6 252 11-299 33-288 (502)
195 cd06615 PKc_MEK Catalytic doma 100.0 7E-44 1.5E-48 319.1 23.9 277 11-301 1-294 (308)
196 KOG4279 Serine/threonine prote 100.0 3E-45 6.6E-50 333.6 15.2 248 18-300 582-838 (1226)
197 cd06651 STKc_MEKK3 Catalytic d 100.0 5.3E-44 1.2E-48 313.3 22.5 250 11-298 2-265 (266)
198 cd06643 STKc_SLK Catalytic dom 100.0 6.1E-44 1.3E-48 315.6 23.1 255 10-300 4-268 (282)
199 cd06654 STKc_PAK1 Catalytic do 100.0 1E-43 2.2E-48 316.3 24.5 252 10-300 19-276 (296)
200 cd06630 STKc_MEKK1 Catalytic d 100.0 6.2E-44 1.3E-48 313.1 22.8 252 12-298 1-268 (268)
201 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.4E-44 1.2E-48 313.3 22.2 246 12-297 1-267 (267)
202 cd06655 STKc_PAK2 Catalytic do 100.0 1.1E-43 2.5E-48 315.9 24.4 252 11-301 19-276 (296)
203 cd08220 STKc_Nek8 Catalytic do 100.0 1E-43 2.2E-48 309.5 23.4 249 12-297 1-256 (256)
204 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8.4E-44 1.8E-48 314.7 23.1 257 10-297 15-282 (282)
205 cd08217 STKc_Nek2 Catalytic do 100.0 1.8E-43 4E-48 309.2 24.7 252 12-297 1-265 (265)
206 KOG0197 Tyrosine kinases [Sign 100.0 1.8E-44 3.8E-49 322.3 18.4 248 6-292 201-455 (468)
207 cd06656 STKc_PAK3 Catalytic do 100.0 6.3E-44 1.4E-48 317.8 21.8 252 11-301 19-276 (297)
208 KOG0983 Mitogen-activated prot 100.0 6.5E-45 1.4E-49 298.6 13.8 255 12-301 93-356 (391)
209 cd06645 STKc_MAP4K3 Catalytic 100.0 3.8E-44 8.3E-49 314.3 19.8 253 9-296 7-267 (267)
210 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-43 2.9E-48 310.5 23.0 247 12-297 1-265 (265)
211 cd05578 STKc_Yank1 Catalytic d 100.0 7.6E-44 1.7E-48 310.8 21.2 246 12-297 1-258 (258)
212 cd06632 STKc_MEKK1_plant Catal 100.0 1.5E-43 3.3E-48 308.7 23.1 248 12-297 1-258 (258)
213 cd08529 STKc_FA2-like Catalyti 100.0 3.3E-43 7.2E-48 306.3 25.0 248 12-297 1-256 (256)
214 cd06646 STKc_MAP4K5 Catalytic 100.0 4.5E-44 9.8E-49 313.9 19.5 253 9-296 7-267 (267)
215 cd06612 STKc_MST1_2 Catalytic 100.0 1.4E-43 2.9E-48 308.7 22.2 251 10-297 2-256 (256)
216 cd05572 STKc_cGK_PKG Catalytic 100.0 1.7E-43 3.8E-48 309.3 22.6 246 19-303 1-261 (262)
217 cd06613 STKc_MAP4K3_like Catal 100.0 2E-43 4.3E-48 308.8 22.1 253 10-296 2-262 (262)
218 PHA03210 serine/threonine kina 100.0 3.3E-44 7.2E-49 340.0 18.4 283 10-301 147-461 (501)
219 cd06652 STKc_MEKK2 Catalytic d 100.0 3.4E-43 7.3E-48 308.0 23.4 250 11-298 2-265 (265)
220 cd05633 STKc_GRK3 Catalytic do 100.0 2.1E-43 4.5E-48 311.6 22.1 250 18-305 1-266 (279)
221 cd08221 STKc_Nek9 Catalytic do 100.0 6.1E-43 1.3E-47 304.7 24.5 248 12-297 1-256 (256)
222 cd05609 STKc_MAST Catalytic do 100.0 3.2E-43 6.9E-48 314.5 23.1 254 11-302 1-281 (305)
223 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-43 2.9E-48 314.8 20.2 254 11-303 22-281 (292)
224 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.2E-43 1.3E-47 307.5 24.0 252 12-297 2-272 (272)
225 cd05577 STKc_GRK Catalytic dom 100.0 1.9E-43 4.2E-48 311.6 20.7 251 19-304 1-264 (277)
226 cd08218 STKc_Nek1 Catalytic do 100.0 6E-43 1.3E-47 304.8 23.5 248 12-297 1-256 (256)
227 cd05106 PTKc_CSF-1R Catalytic 100.0 3.6E-43 7.9E-48 322.1 23.1 253 6-293 33-367 (374)
228 PHA02988 hypothetical protein; 100.0 3.8E-43 8.3E-48 310.4 22.4 249 8-293 15-274 (283)
229 KOG0664 Nemo-like MAPK-related 100.0 1.8E-45 3.8E-50 302.1 6.9 282 14-301 56-350 (449)
230 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.1E-42 2.4E-47 308.3 25.1 262 11-301 1-273 (287)
231 cd05611 STKc_Rim15_like Cataly 100.0 4E-43 8.8E-48 306.6 21.6 246 17-302 2-259 (260)
232 cd05606 STKc_beta_ARK Catalyti 100.0 5.5E-43 1.2E-47 308.8 22.0 249 18-304 1-265 (278)
233 cd06607 STKc_TAO Catalytic dom 100.0 5.6E-43 1.2E-47 313.2 22.4 252 9-300 13-273 (307)
234 KOG0670 U4/U6-associated splic 100.0 3.1E-44 6.8E-49 317.5 13.9 283 8-299 429-751 (752)
235 KOG4721 Serine/threonine prote 100.0 3.2E-44 7E-49 320.5 13.1 240 14-297 127-367 (904)
236 PHA03390 pk1 serine/threonine- 100.0 9.3E-43 2E-47 305.5 22.1 248 11-299 14-267 (267)
237 cd06605 PKc_MAPKK Catalytic do 100.0 5.5E-43 1.2E-47 306.5 20.5 251 11-300 1-263 (265)
238 cd05096 PTKc_DDR1 Catalytic do 100.0 1.4E-42 3E-47 310.3 23.0 255 9-292 3-299 (304)
239 cd08225 STKc_Nek5 Catalytic do 100.0 2E-42 4.3E-47 301.5 23.3 249 12-297 1-257 (257)
240 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.8E-43 6E-48 310.6 17.9 250 11-301 4-260 (277)
241 cd06624 STKc_ASK Catalytic dom 100.0 3.1E-42 6.6E-47 302.4 24.1 252 11-297 8-268 (268)
242 cd06623 PKc_MAPKK_plant_like C 100.0 2.7E-42 5.8E-47 301.8 23.7 251 11-301 1-263 (264)
243 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-42 3.2E-47 318.3 22.7 253 7-294 31-370 (375)
244 cd08226 PK_STRAD_beta Pseudoki 100.0 7.4E-43 1.6E-47 315.2 20.4 279 16-303 3-317 (328)
245 cd06640 STKc_MST4 Catalytic do 100.0 1.2E-42 2.6E-47 306.5 21.0 249 11-300 4-259 (277)
246 cd08215 STKc_Nek Catalytic dom 100.0 3.4E-42 7.4E-47 299.8 23.4 250 12-297 1-258 (258)
247 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-42 2.9E-47 307.4 20.8 256 9-300 3-272 (284)
248 cd08219 STKc_Nek3 Catalytic do 100.0 2.5E-42 5.5E-47 300.7 22.3 245 12-294 1-252 (255)
249 cd06659 STKc_PAK6 Catalytic do 100.0 2E-42 4.4E-47 308.0 22.1 253 11-302 21-279 (297)
250 cd06618 PKc_MKK7 Catalytic dom 100.0 1.8E-42 4E-47 308.3 21.8 262 6-302 10-281 (296)
251 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.9E-42 4.2E-47 303.4 21.5 247 8-293 2-260 (266)
252 cd06633 STKc_TAO3 Catalytic do 100.0 4.5E-42 9.7E-47 308.1 24.0 251 10-300 20-279 (313)
253 cd05061 PTKc_InsR Catalytic do 100.0 4.8E-42 1E-46 304.4 23.8 260 6-301 1-287 (288)
254 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.6E-42 1.2E-46 300.1 23.8 249 11-297 2-264 (264)
255 cd06626 STKc_MEKK4 Catalytic d 100.0 4.8E-42 1E-46 300.3 23.1 250 12-297 1-264 (264)
256 cd06917 STKc_NAK1_like Catalyt 100.0 2.8E-42 6.2E-47 304.1 21.5 251 12-301 2-262 (277)
257 cd06647 STKc_PAK_I Catalytic d 100.0 3E-42 6.5E-47 306.4 21.6 253 10-301 18-276 (293)
258 cd08216 PK_STRAD Pseudokinase 100.0 2.8E-42 6.1E-47 309.6 21.6 272 23-303 12-304 (314)
259 cd05052 PTKc_Abl Catalytic dom 100.0 6.8E-42 1.5E-46 299.4 23.4 248 8-293 3-257 (263)
260 KOG0614 cGMP-dependent protein 100.0 4.3E-44 9.3E-49 315.9 9.1 254 12-304 421-687 (732)
261 cd08228 STKc_Nek6 Catalytic do 100.0 5.8E-42 1.3E-46 300.4 22.6 249 11-293 2-260 (267)
262 cd05048 PTKc_Ror Catalytic Dom 100.0 3.3E-42 7.2E-47 304.6 20.9 250 9-294 3-279 (283)
263 cd06648 STKc_PAK_II Catalytic 100.0 8.3E-42 1.8E-46 302.4 23.4 252 12-302 20-277 (285)
264 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-41 2.4E-46 296.6 23.8 249 12-297 1-256 (256)
265 cd05579 STKc_MAST_like Catalyt 100.0 3.8E-42 8.2E-47 300.9 20.9 245 19-302 1-265 (265)
266 cd05062 PTKc_IGF-1R Catalytic 100.0 6.5E-42 1.4E-46 301.8 22.5 253 6-294 1-274 (277)
267 cd05054 PTKc_VEGFR Catalytic d 100.0 3.2E-42 6.9E-47 311.8 20.8 255 6-294 2-329 (337)
268 cd05088 PTKc_Tie2 Catalytic do 100.0 4.3E-42 9.4E-47 306.8 21.3 251 8-294 4-276 (303)
269 KOG0584 Serine/threonine prote 100.0 3E-43 6.5E-48 318.6 13.5 254 11-300 39-302 (632)
270 cd05093 PTKc_TrkB Catalytic do 100.0 7.1E-42 1.5E-46 303.3 22.0 249 8-292 2-273 (288)
271 KOG0608 Warts/lats-like serine 100.0 3.1E-43 6.8E-48 317.6 13.3 267 10-314 628-948 (1034)
272 cd05613 STKc_MSK1_N N-terminal 100.0 6.6E-42 1.4E-46 303.8 21.6 256 12-303 1-277 (290)
273 cd06641 STKc_MST3 Catalytic do 100.0 9.8E-42 2.1E-46 300.7 22.5 249 11-300 4-259 (277)
274 cd05049 PTKc_Trk Catalytic dom 100.0 4.5E-42 9.8E-47 303.2 20.4 250 8-293 2-276 (280)
275 cd06635 STKc_TAO1 Catalytic do 100.0 1.5E-41 3.3E-46 305.2 24.1 249 11-299 25-282 (317)
276 cd06634 STKc_TAO2 Catalytic do 100.0 9.4E-42 2E-46 305.4 22.1 251 10-300 14-273 (308)
277 cd05581 STKc_PDK1 Catalytic do 100.0 7.4E-42 1.6E-46 301.7 21.0 246 11-297 1-280 (280)
278 PRK13184 pknD serine/threonine 100.0 5.9E-42 1.3E-46 333.4 22.3 250 11-294 2-285 (932)
279 cd05122 PKc_STE Catalytic doma 100.0 3.7E-41 8E-46 292.2 24.8 248 12-296 1-253 (253)
280 cd08222 STKc_Nek11 Catalytic d 100.0 8.3E-42 1.8E-46 298.3 20.7 249 12-297 1-260 (260)
281 cd05072 PTKc_Lyn Catalytic dom 100.0 1.8E-41 3.8E-46 296.4 22.6 248 6-292 1-255 (261)
282 cd05032 PTKc_InsR_like Catalyt 100.0 2.3E-41 5.1E-46 298.2 23.2 251 7-293 2-273 (277)
283 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-41 3.6E-46 300.6 22.3 256 9-301 17-277 (286)
284 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.9E-41 4E-46 295.5 22.1 246 9-294 2-254 (256)
285 PLN03225 Serine/threonine-prot 100.0 2.2E-41 4.8E-46 322.7 24.5 281 8-303 129-459 (566)
286 cd06627 STKc_Cdc7_like Catalyt 100.0 3.6E-41 7.7E-46 293.0 23.7 246 12-297 1-254 (254)
287 cd06657 STKc_PAK4 Catalytic do 100.0 1.2E-41 2.6E-46 302.3 21.0 251 13-302 22-278 (292)
288 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-41 3.3E-46 305.2 21.8 248 7-294 3-264 (316)
289 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.6E-41 5.6E-46 294.5 22.7 245 9-293 2-253 (256)
290 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-41 3.2E-46 302.6 21.3 248 11-294 2-271 (297)
291 cd06606 STKc_MAPKKK Catalytic 100.0 4E-41 8.7E-46 293.2 23.6 250 12-297 1-260 (260)
292 cd05071 PTKc_Src Catalytic dom 100.0 2.9E-41 6.3E-46 295.3 22.7 246 7-292 2-254 (262)
293 cd05035 PTKc_Axl_like Catalyti 100.0 3E-41 6.6E-46 296.7 22.9 251 13-294 1-268 (273)
294 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-43 2.7E-48 342.4 8.3 254 11-302 1235-1502(1509)
295 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.2E-41 6.9E-46 297.5 22.9 252 8-294 3-274 (277)
296 cd05082 PTKc_Csk Catalytic dom 100.0 5.6E-41 1.2E-45 292.5 23.9 247 6-293 1-251 (256)
297 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 7.8E-41 1.7E-45 293.2 24.7 248 11-293 2-260 (267)
298 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.5E-41 9.7E-46 309.7 24.1 253 6-293 32-392 (400)
299 cd05610 STKc_MASTL Catalytic d 100.0 3.7E-41 8.1E-46 328.6 24.7 142 10-162 3-152 (669)
300 cd08229 STKc_Nek7 Catalytic do 100.0 1.8E-41 3.8E-46 297.4 20.2 248 11-292 2-259 (267)
301 cd05084 PTKc_Fes Catalytic dom 100.0 2.8E-41 6E-46 293.6 20.9 238 17-293 1-248 (252)
302 cd05053 PTKc_FGFR Catalytic do 100.0 4.9E-41 1.1E-45 298.6 22.4 252 7-294 8-287 (293)
303 cd05090 PTKc_Ror1 Catalytic do 100.0 3.5E-41 7.7E-46 298.1 21.3 249 10-294 4-279 (283)
304 cd05068 PTKc_Frk_like Catalyti 100.0 5.7E-41 1.2E-45 293.2 22.3 246 8-292 3-255 (261)
305 cd05091 PTKc_Ror2 Catalytic do 100.0 1.6E-41 3.5E-46 300.3 18.8 250 9-294 3-279 (283)
306 cd00192 PTKc Catalytic domain 100.0 8.1E-41 1.8E-45 291.9 22.7 242 17-294 1-260 (262)
307 cd05033 PTKc_EphR Catalytic do 100.0 1E-40 2.2E-45 292.5 23.3 247 9-294 2-261 (266)
308 KOG1006 Mitogen-activated prot 100.0 9.1E-44 2E-48 290.7 3.4 267 8-303 61-336 (361)
309 cd05059 PTKc_Tec_like Catalyti 100.0 6.2E-41 1.4E-45 292.2 21.5 246 9-294 2-254 (256)
310 cd05098 PTKc_FGFR1 Catalytic d 100.0 8E-41 1.7E-45 299.3 22.6 253 6-294 13-295 (307)
311 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1E-40 2.2E-45 295.1 23.0 258 11-293 3-276 (283)
312 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-40 2.3E-45 296.2 22.9 248 9-292 3-276 (291)
313 cd05075 PTKc_Axl Catalytic dom 100.0 6.4E-41 1.4E-45 294.6 21.2 251 13-294 1-267 (272)
314 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.5E-41 7.6E-46 294.5 19.4 245 10-293 5-256 (261)
315 cd05123 STKc_AGC Catalytic dom 100.0 7.6E-41 1.6E-45 290.4 21.3 238 19-297 1-250 (250)
316 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.8E-41 1.9E-45 291.9 21.6 246 7-292 2-254 (260)
317 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-40 2.4E-45 290.5 22.1 245 7-293 2-251 (256)
318 cd05055 PTKc_PDGFR Catalytic d 100.0 1.4E-40 3.1E-45 296.8 23.3 251 6-293 30-296 (302)
319 cd05069 PTKc_Yes Catalytic dom 100.0 2.4E-40 5.1E-45 289.2 23.9 245 8-292 3-254 (260)
320 cd05109 PTKc_HER2 Catalytic do 100.0 1.1E-40 2.4E-45 294.3 22.0 247 7-293 3-263 (279)
321 cd05051 PTKc_DDR Catalytic dom 100.0 1.3E-40 2.9E-45 296.2 22.7 256 9-293 3-292 (296)
322 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-40 3.3E-45 290.4 22.6 247 7-293 2-255 (260)
323 cd05066 PTKc_EphR_A Catalytic 100.0 1.4E-40 3E-45 291.8 21.9 246 9-293 2-261 (267)
324 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-40 2.4E-45 295.6 21.5 256 12-303 1-275 (288)
325 KOG0193 Serine/threonine prote 100.0 5E-42 1.1E-46 309.0 12.8 251 5-293 386-648 (678)
326 cd05092 PTKc_TrkA Catalytic do 100.0 1.4E-40 3E-45 293.9 21.7 249 9-293 3-276 (280)
327 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.3E-40 7.3E-45 296.2 24.2 251 7-293 8-288 (314)
328 cd05034 PTKc_Src_like Catalyti 100.0 1.8E-40 4E-45 290.0 21.9 247 7-292 2-255 (261)
329 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.3E-40 4.9E-45 290.6 22.6 247 8-293 2-262 (268)
330 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.3E-40 5E-45 295.9 23.0 253 6-294 10-292 (304)
331 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.3E-40 2.9E-45 302.2 21.7 255 6-294 2-335 (343)
332 KOG0695 Serine/threonine prote 100.0 1.7E-41 3.7E-46 286.1 14.6 258 7-303 246-525 (593)
333 KOG1035 eIF-2alpha kinase GCN2 100.0 3.9E-41 8.4E-46 323.6 18.9 256 11-298 479-875 (1351)
334 cd05065 PTKc_EphR_B Catalytic 100.0 2.6E-40 5.5E-45 290.4 22.5 246 9-293 2-263 (269)
335 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.8E-40 6E-45 299.2 23.1 253 6-294 7-289 (334)
336 cd05043 PTK_Ryk Pseudokinase d 100.0 2.5E-40 5.3E-45 292.2 22.1 250 8-292 3-270 (280)
337 cd05576 STKc_RPK118_like Catal 100.0 3.7E-41 8.1E-46 290.2 16.0 228 22-297 4-237 (237)
338 cd05116 PTKc_Syk Catalytic dom 100.0 2.7E-40 5.8E-45 288.3 21.5 234 18-292 2-249 (257)
339 cd05045 PTKc_RET Catalytic dom 100.0 2.8E-40 6.1E-45 293.3 22.0 246 12-293 1-281 (290)
340 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.9E-40 1.1E-44 290.9 23.4 263 9-293 2-278 (284)
341 cd05107 PTKc_PDGFR_beta Cataly 100.0 4E-40 8.6E-45 303.3 23.5 254 6-294 32-395 (401)
342 cd05097 PTKc_DDR_like Catalyti 100.0 2.3E-40 4.9E-45 294.7 21.2 256 9-293 3-291 (295)
343 PHA02882 putative serine/threo 100.0 9.6E-40 2.1E-44 290.4 24.6 257 8-293 9-291 (294)
344 cd05046 PTK_CCK4 Pseudokinase 100.0 6.8E-40 1.5E-44 288.6 23.5 252 8-294 2-272 (275)
345 KOG1290 Serine/threonine prote 100.0 3E-40 6.5E-45 290.4 20.8 292 5-302 72-558 (590)
346 cd05050 PTKc_Musk Catalytic do 100.0 3E-40 6.4E-45 292.9 20.9 250 8-293 2-284 (288)
347 cd05047 PTKc_Tie Catalytic dom 100.0 4.1E-40 8.9E-45 289.3 21.3 241 17-293 1-263 (270)
348 cd05073 PTKc_Hck Catalytic dom 100.0 7.5E-40 1.6E-44 286.0 22.7 246 7-292 2-254 (260)
349 cd05095 PTKc_DDR2 Catalytic do 100.0 5.5E-40 1.2E-44 292.3 21.9 255 10-293 4-292 (296)
350 PF07714 Pkinase_Tyr: Protein 100.0 2.5E-40 5.5E-45 288.8 19.2 242 14-293 2-257 (259)
351 cd05040 PTKc_Ack_like Catalyti 100.0 9.2E-40 2E-44 284.9 22.6 239 17-293 1-253 (257)
352 cd05060 PTKc_Syk_like Catalyti 100.0 9.1E-40 2E-44 285.0 22.4 235 17-292 1-249 (257)
353 cd08528 STKc_Nek10 Catalytic d 100.0 8.9E-40 1.9E-44 286.9 22.5 249 12-294 1-266 (269)
354 cd05112 PTKc_Itk Catalytic dom 100.0 1.1E-39 2.4E-44 284.1 22.9 246 9-294 2-254 (256)
355 cd05115 PTKc_Zap-70 Catalytic 100.0 1.4E-39 3.1E-44 283.7 22.9 236 18-293 2-250 (257)
356 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.8E-40 3.8E-45 289.7 16.8 236 17-294 1-256 (258)
357 cd05057 PTKc_EGFR_like Catalyt 100.0 1.3E-39 2.7E-44 287.6 22.3 246 7-292 3-262 (279)
358 KOG4250 TANK binding protein k 100.0 2.9E-41 6.3E-46 309.4 11.6 206 11-218 13-228 (732)
359 cd05056 PTKc_FAK Catalytic dom 100.0 2.6E-39 5.6E-44 284.2 23.1 246 8-293 3-260 (270)
360 cd05083 PTKc_Chk Catalytic dom 100.0 1.3E-39 2.8E-44 283.6 20.7 245 6-293 1-249 (254)
361 cd05111 PTK_HER3 Pseudokinase 100.0 2E-39 4.2E-44 286.3 22.1 247 7-293 3-263 (279)
362 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.4E-39 2.9E-44 284.7 20.8 236 17-294 1-260 (262)
363 cd05042 PTKc_Aatyk Catalytic d 100.0 2.3E-39 5E-44 284.3 22.3 246 17-293 1-265 (269)
364 smart00219 TyrKc Tyrosine kina 100.0 1.8E-39 3.9E-44 282.9 21.3 242 14-293 2-256 (258)
365 cd05085 PTKc_Fer Catalytic dom 100.0 3.3E-39 7.1E-44 280.2 22.8 237 17-293 1-246 (250)
366 cd05041 PTKc_Fes_like Catalyti 100.0 2.3E-39 5E-44 281.3 21.6 237 17-293 1-247 (251)
367 KOG1151 Tousled-like protein k 100.0 3.2E-41 7E-46 293.7 9.7 260 10-299 462-746 (775)
368 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.8E-39 1E-43 282.3 23.6 245 17-292 1-264 (269)
369 cd05110 PTKc_HER4 Catalytic do 100.0 2E-39 4.3E-44 289.7 21.0 248 7-294 3-264 (303)
370 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.4E-39 7.3E-44 285.6 22.2 259 9-294 2-279 (284)
371 KOG0587 Traf2- and Nck-interac 100.0 1.1E-39 2.4E-44 304.6 19.7 261 9-299 17-287 (953)
372 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2E-39 4.3E-44 285.5 20.1 235 18-294 2-272 (274)
373 cd05044 PTKc_c-ros Catalytic d 100.0 3E-39 6.5E-44 283.5 20.1 241 17-293 1-265 (269)
374 KOG0194 Protein tyrosine kinas 100.0 1E-39 2.2E-44 296.1 17.4 249 6-292 152-414 (474)
375 KOG1187 Serine/threonine prote 100.0 3.3E-39 7.2E-44 290.7 20.3 260 10-292 74-346 (361)
376 cd05058 PTKc_Met_Ron Catalytic 100.0 6.5E-39 1.4E-43 280.3 21.2 239 17-293 1-254 (262)
377 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.6E-39 1.6E-43 281.6 21.2 250 13-293 1-267 (273)
378 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.8E-38 3.9E-43 278.6 23.0 246 17-293 1-264 (268)
379 KOG1026 Nerve growth factor re 100.0 9.2E-40 2E-44 306.0 15.4 246 10-291 485-755 (774)
380 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 7.8E-39 1.7E-43 279.2 19.9 233 17-293 1-256 (259)
381 KOG1167 Serine/threonine prote 100.0 1.9E-39 4.1E-44 281.4 12.9 280 10-302 35-389 (418)
382 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.1E-38 1.1E-42 277.8 20.8 261 10-293 3-278 (284)
383 PLN03224 probable serine/threo 100.0 1.5E-37 3.2E-42 289.6 22.9 274 8-299 142-505 (507)
384 KOG1095 Protein tyrosine kinas 100.0 1.4E-37 3.1E-42 301.2 21.2 249 9-293 690-956 (1025)
385 KOG1027 Serine/threonine prote 100.0 1.8E-38 4E-43 295.2 10.6 250 13-299 511-772 (903)
386 smart00220 S_TKc Serine/Threon 100.0 2E-36 4.4E-41 260.7 20.8 238 23-297 1-244 (244)
387 KOG0196 Tyrosine kinase, EPH ( 100.0 5.7E-38 1.2E-42 289.7 10.5 247 8-293 626-886 (996)
388 KOG4257 Focal adhesion tyrosin 100.0 2.2E-37 4.7E-42 279.5 13.2 244 8-291 386-642 (974)
389 KOG0984 Mitogen-activated prot 100.0 2E-37 4.3E-42 244.8 10.5 213 10-228 45-267 (282)
390 KOG4278 Protein tyrosine kinas 100.0 1.6E-36 3.5E-41 273.9 15.6 248 6-291 262-516 (1157)
391 KOG0199 ACK and related non-re 100.0 2.4E-36 5.2E-41 275.9 15.1 252 6-296 105-370 (1039)
392 KOG1094 Discoidin domain recep 100.0 5E-36 1.1E-40 268.9 15.3 251 10-292 537-798 (807)
393 PLN00113 leucine-rich repeat r 100.0 9.9E-36 2.2E-40 304.5 19.4 252 12-294 691-947 (968)
394 KOG1152 Signal transduction se 100.0 6.2E-35 1.3E-39 261.7 11.8 195 11-215 561-770 (772)
395 KOG0576 Mitogen-activated prot 100.0 3.2E-35 6.9E-40 267.4 7.6 256 10-299 14-276 (829)
396 KOG1345 Serine/threonine kinas 100.0 8.8E-35 1.9E-39 238.8 5.9 265 1-299 14-292 (378)
397 KOG3653 Transforming growth fa 100.0 1.8E-33 3.8E-38 247.2 13.7 259 10-289 209-494 (534)
398 KOG0200 Fibroblast/platelet-de 100.0 5.8E-32 1.3E-36 260.5 21.5 251 6-292 291-573 (609)
399 cd00180 PKc Catalytic domain o 100.0 9.2E-31 2E-35 220.2 21.1 208 19-295 1-215 (215)
400 KOG2052 Activin A type IB rece 100.0 1.8E-31 3.8E-36 233.0 17.0 256 10-291 210-496 (513)
401 PLN00181 protein SPA1-RELATED; 100.0 2.1E-32 4.5E-37 273.4 12.4 207 60-301 28-272 (793)
402 KOG1025 Epidermal growth facto 100.0 1.8E-31 3.9E-36 247.9 14.5 241 12-292 697-951 (1177)
403 smart00221 STYKc Protein kinas 100.0 3E-30 6.6E-35 219.9 19.4 201 13-224 1-211 (225)
404 smart00750 KIND kinase non-cat 100.0 5.7E-30 1.2E-34 210.2 11.5 167 93-299 1-170 (176)
405 KOG1024 Receptor-like protein 100.0 1.9E-29 4.1E-34 217.1 13.1 250 8-292 281-549 (563)
406 KOG0590 Checkpoint kinase and 100.0 2.9E-30 6.4E-35 245.8 6.5 257 14-301 321-592 (601)
407 KOG1163 Casein kinase (serine/ 100.0 5E-28 1.1E-32 196.0 15.7 211 5-225 9-232 (341)
408 KOG1164 Casein kinase (serine/ 99.9 6.7E-26 1.4E-30 203.5 22.0 251 12-294 19-293 (322)
409 KOG0603 Ribosomal protein S6 k 99.9 1.2E-28 2.7E-33 224.7 3.8 237 18-303 1-252 (612)
410 KOG1165 Casein kinase (serine/ 99.9 6.3E-26 1.4E-30 191.8 16.8 203 6-218 23-240 (449)
411 PRK09188 serine/threonine prot 99.9 1.3E-26 2.8E-31 207.7 13.0 170 8-198 15-210 (365)
412 COG0515 SPS1 Serine/threonine 99.9 7.5E-25 1.6E-29 197.1 23.0 257 13-302 2-283 (384)
413 KOG0606 Microtubule-associated 99.9 1E-26 2.2E-31 222.4 10.6 225 9-303 81-324 (1205)
414 PF14531 Kinase-like: Kinase-l 99.9 2.1E-24 4.5E-29 185.6 14.1 237 12-285 13-288 (288)
415 KOG4158 BRPK/PTEN-induced prot 99.9 3.9E-24 8.5E-29 185.1 12.3 195 62-289 274-505 (598)
416 cd05147 RIO1_euk RIO kinase fa 99.9 4.8E-24 1.1E-28 176.1 10.4 135 16-164 2-167 (190)
417 KOG1240 Protein kinase contain 99.9 2.8E-24 6E-29 206.3 8.5 241 12-294 24-291 (1431)
418 PRK10359 lipopolysaccharide co 99.9 1.3E-23 2.7E-28 175.6 10.9 172 8-208 28-216 (232)
419 PRK12274 serine/threonine prot 99.9 2.1E-22 4.5E-27 164.7 12.7 182 14-218 5-211 (218)
420 cd05145 RIO1_like RIO kinase f 99.9 3E-22 6.4E-27 166.1 12.4 138 15-166 1-169 (190)
421 KOG1166 Mitotic checkpoint ser 99.9 7.3E-21 1.6E-25 185.5 14.3 195 6-212 693-901 (974)
422 PRK10345 hypothetical protein; 99.8 2E-20 4.4E-25 155.9 14.5 136 14-161 5-156 (210)
423 smart00090 RIO RIO-like kinase 99.8 1.1E-20 2.4E-25 161.4 10.8 139 12-163 29-197 (237)
424 KOG0195 Integrin-linked kinase 99.8 4.8E-21 1E-25 158.3 7.2 238 12-292 191-440 (448)
425 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.4E-20 5.3E-25 167.6 5.3 179 81-297 328-515 (516)
426 KOG1023 Natriuretic peptide re 99.8 2.3E-19 5E-24 164.1 11.3 203 58-292 1-218 (484)
427 KOG0590 Checkpoint kinase and 99.8 3.3E-21 7.2E-26 184.0 -0.8 256 10-299 19-291 (601)
428 cd05144 RIO2_C RIO kinase fami 99.8 2.6E-18 5.7E-23 143.5 10.4 134 12-166 16-177 (198)
429 PRK14879 serine/threonine prot 99.8 8.3E-18 1.8E-22 142.0 11.8 129 17-163 2-143 (211)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 3.3E-17 7.2E-22 137.0 12.3 125 18-163 1-138 (199)
431 PRK09605 bifunctional UGMP fam 99.7 1.1E-16 2.3E-21 153.4 13.1 130 12-163 334-476 (535)
432 cd05119 RIO RIO kinase family, 99.7 1.5E-16 3.2E-21 131.8 11.0 133 16-166 2-166 (187)
433 KOG0601 Cyclin-dependent kinas 99.7 3.2E-17 7E-22 150.2 7.2 250 10-300 113-385 (524)
434 PRK01723 3-deoxy-D-manno-octul 99.7 1E-15 2.2E-20 131.1 13.4 133 17-163 37-191 (239)
435 KOG0606 Microtubule-associated 99.6 7.5E-17 1.6E-21 155.5 3.3 268 10-315 803-1113(1205)
436 cd05120 APH_ChoK_like Aminogly 99.6 2.5E-15 5.5E-20 119.6 10.9 131 15-163 2-138 (155)
437 KOG1243 Protein kinase [Genera 99.5 3.2E-13 6.9E-18 125.5 15.8 165 30-211 31-200 (690)
438 KOG1266 Protein kinase [Signal 99.5 2.8E-14 6.1E-19 121.6 6.3 211 56-300 119-337 (458)
439 PRK04750 ubiB putative ubiquin 99.5 2E-13 4.3E-18 128.4 10.9 141 12-166 121-316 (537)
440 cd05146 RIO3_euk RIO kinase fa 99.5 9.2E-13 2E-17 108.0 11.6 134 16-166 2-176 (197)
441 TIGR01982 UbiB 2-polyprenylphe 99.4 7.1E-13 1.5E-17 123.2 11.9 137 16-165 122-308 (437)
442 KOG3741 Poly(A) ribonuclease s 99.4 1.1E-11 2.4E-16 112.1 17.7 215 24-294 289-521 (655)
443 cd05151 ChoK Choline Kinase (C 99.4 1.2E-12 2.6E-17 106.4 9.2 124 16-162 3-135 (170)
444 KOG2137 Protein kinase [Signal 99.4 1.7E-13 3.8E-18 127.7 2.9 155 120-301 107-272 (700)
445 KOG0601 Cyclin-dependent kinas 99.3 8.8E-13 1.9E-17 121.4 4.8 247 10-299 264-519 (524)
446 KOG3087 Serine/threonine prote 99.3 5E-11 1.1E-15 94.2 12.2 139 15-163 11-165 (229)
447 COG3642 Mn2+-dependent serine/ 99.2 2.8E-10 6E-15 90.5 10.9 126 17-163 2-140 (204)
448 PF01163 RIO1: RIO1 family; I 99.1 7.7E-10 1.7E-14 90.5 10.7 122 26-165 1-157 (188)
449 PRK15123 lipopolysaccharide co 99.1 3.1E-09 6.8E-14 92.1 14.6 133 25-162 36-193 (268)
450 cd05154 ACAD10_11_like Acyl-Co 99.1 2E-09 4.2E-14 91.4 13.0 139 17-162 4-205 (223)
451 COG4248 Uncharacterized protei 98.9 1.9E-08 4.1E-13 89.5 13.3 198 13-217 13-225 (637)
452 COG0478 RIO-like serine/threon 98.8 2.7E-08 5.8E-13 84.0 10.5 132 13-164 93-252 (304)
453 PRK09902 hypothetical protein; 98.8 1.9E-07 4.2E-12 76.9 14.1 137 20-163 27-179 (216)
454 PF06293 Kdo: Lipopolysacchari 98.8 4.7E-08 1E-12 81.9 10.6 108 50-163 57-170 (206)
455 PF06176 WaaY: Lipopolysacchar 98.8 1.4E-07 2.9E-12 78.1 12.4 139 8-162 28-182 (229)
456 COG0661 AarF Predicted unusual 98.7 3.4E-08 7.4E-13 92.8 8.8 136 17-166 131-317 (517)
457 KOG0576 Mitogen-activated prot 98.7 2.2E-09 4.8E-14 99.8 0.7 245 14-300 245-490 (829)
458 COG1718 RIO1 Serine/threonine 98.6 7.1E-07 1.5E-11 74.8 11.6 133 18-165 55-217 (268)
459 KOG1035 eIF-2alpha kinase GCN2 98.6 1.6E-07 3.4E-12 93.3 9.0 203 52-300 230-440 (1351)
460 PF01636 APH: Phosphotransfera 98.5 1.2E-06 2.7E-11 74.8 10.9 75 16-94 2-80 (239)
461 KOG1235 Predicted unusual prot 98.4 1.1E-06 2.5E-11 82.4 9.5 138 16-166 166-357 (538)
462 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 6.4E-06 1.4E-10 70.0 11.4 69 17-94 7-79 (226)
463 PLN02876 acyl-CoA dehydrogenas 98.1 3.2E-05 6.9E-10 78.3 13.0 78 15-94 42-129 (822)
464 COG2112 Predicted Ser/Thr prot 98.1 2.1E-05 4.6E-10 62.5 8.8 127 12-162 23-154 (201)
465 cd05150 APH Aminoglycoside 3'- 98.0 9.6E-05 2.1E-09 63.7 11.6 69 19-94 6-77 (244)
466 KOG2270 Serine/threonine prote 98.0 6.5E-05 1.4E-09 66.6 10.0 139 14-165 147-315 (520)
467 PF10707 YrbL-PhoP_reg: PhoP r 97.9 0.00025 5.5E-09 58.6 11.3 128 16-157 6-165 (199)
468 cd05155 APH_ChoK_like_1 Unchar 97.9 0.00019 4E-09 61.5 11.0 30 132-162 164-193 (235)
469 PF13095 FTA2: Kinetochore Sim 97.8 0.00025 5.5E-09 58.3 10.7 127 10-161 36-206 (207)
470 TIGR02721 ycfN_thiK thiamine k 97.8 0.00019 4.1E-09 62.3 9.7 133 18-163 3-175 (256)
471 cd05157 ETNK_euk Ethanolamine 97.8 0.00062 1.3E-08 58.2 12.7 69 16-93 3-76 (235)
472 KOG1826 Ras GTPase activating 97.8 7.6E-06 1.6E-10 83.8 0.8 213 54-299 1279-1497(2724)
473 KOG1093 Predicted protein kina 97.7 6.8E-05 1.5E-09 69.2 6.5 170 53-300 31-200 (725)
474 PRK09550 mtnK methylthioribose 97.7 0.00088 1.9E-08 61.5 13.3 72 15-93 30-115 (401)
475 PRK10593 hypothetical protein; 97.7 0.00092 2E-08 59.4 13.1 76 14-93 17-97 (297)
476 PF12260 PIP49_C: Protein-kina 97.6 0.0003 6.6E-09 57.8 7.6 101 53-164 8-112 (188)
477 cd05153 HomoserineK_II Homoser 97.5 0.00082 1.8E-08 59.7 10.4 143 16-162 19-204 (296)
478 PRK05231 homoserine kinase; Pr 97.4 0.0021 4.5E-08 57.8 11.7 30 132-162 187-216 (319)
479 TIGR00938 thrB_alt homoserine 97.4 0.0022 4.7E-08 57.4 11.1 145 15-162 26-216 (307)
480 PLN02236 choline kinase 97.3 0.0048 1E-07 56.0 13.0 30 133-162 201-230 (344)
481 KOG2268 Serine/threonine prote 97.2 0.00036 7.8E-09 61.1 4.1 135 12-167 93-255 (465)
482 TIGR01767 MTRK 5-methylthiorib 97.2 0.0078 1.7E-07 54.3 12.1 69 18-93 2-84 (370)
483 cd05156 ChoK_euk Choline Kinas 97.1 0.014 3.1E-07 51.9 13.3 48 16-63 3-59 (302)
484 PLN02421 phosphotransferase, a 97.0 0.0095 2.1E-07 53.8 11.7 29 134-162 184-212 (330)
485 COG3173 Predicted aminoglycosi 97.0 0.012 2.6E-07 52.3 11.6 29 134-163 200-228 (321)
486 TIGR02906 spore_CotS spore coa 97.0 0.017 3.8E-07 51.6 12.7 29 132-162 187-215 (313)
487 cd05152 MPH2' Macrolide 2'-Pho 96.9 0.009 1.9E-07 52.4 10.2 30 133-162 186-215 (276)
488 PRK12396 5-methylribose kinase 96.8 0.011 2.5E-07 53.9 10.3 71 16-93 34-117 (409)
489 PLN02756 S-methyl-5-thioribose 96.7 0.025 5.3E-07 52.1 11.5 70 15-93 36-119 (418)
490 TIGR02904 spore_ysxE spore coa 96.5 0.044 9.5E-07 49.0 11.7 30 132-162 196-225 (309)
491 PF03881 Fructosamin_kin: Fruc 95.9 0.068 1.5E-06 47.1 9.4 72 14-92 20-95 (288)
492 COG5072 ALK1 Serine/threonine 95.8 0.033 7.1E-07 49.9 7.1 76 79-164 296-371 (488)
493 PTZ00384 choline kinase; Provi 95.5 0.31 6.6E-06 44.9 12.6 28 133-162 228-255 (383)
494 PF07914 DUF1679: Protein of u 95.3 0.053 1.2E-06 50.4 6.9 30 134-163 270-303 (414)
495 KOG1236 Predicted unusual prot 95.1 0.057 1.2E-06 49.2 6.2 60 84-148 320-380 (565)
496 PF05445 Pox_ser-thr_kin: Poxv 94.3 0.062 1.3E-06 47.8 4.2 78 86-163 248-346 (434)
497 COG2334 Putative homoserine ki 94.2 0.087 1.9E-06 47.3 5.2 29 134-162 199-227 (331)
498 PRK10271 thiK thiamine kinase; 93.9 0.052 1.1E-06 44.3 3.0 29 133-163 78-106 (188)
499 PTZ00296 choline kinase; Provi 93.9 1.1 2.4E-05 42.1 12.2 49 15-63 109-168 (442)
500 COG0510 ycfN Thiamine kinase a 93.9 0.12 2.5E-06 45.2 5.4 50 112-163 132-183 (269)
No 1
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-73 Score=485.89 Aligned_cols=342 Identities=71% Similarity=1.208 Sum_probs=327.8
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
.-+|+..+++|+|+||.||.|....+++.||||++..+.+...+|+.+|+.++|||||++.-+|+...+.+..++.+|||
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle 102 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE 102 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999887776665678889999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCC
Q 018619 90 YVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA 169 (353)
Q Consensus 90 ~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~ 169 (353)
|++.+|.+.+.++...+.+++...++-+.+||++||+|||+ .||+||||||+|+|+|.+.+.+||||||.|+....++.
T Consensus 103 ymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~-~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 103 YMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS-HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred hchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh-cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence 99999999999988889999999999999999999999999 79999999999999999889999999999999999999
Q ss_pred cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCc
Q 018619 170 NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 249 (353)
Q Consensus 170 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
..++.+|+.|+|||++.|...|+.+.||||.||++.||+.|++.|.+.+..+++..|++.+|.|+.+.+..+++++.++.
T Consensus 182 niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~ 261 (364)
T KOG0658|consen 182 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFK 261 (364)
T ss_pred ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCCCCCCCCCCCCCCchhhhccCCHH
Q 018619 250 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPE 329 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (353)
+|.+...+|...+.+.+++++.||+.++|+++|.+|.++.|++.||||..++.++..++.+.++|++++|+....+..++
T Consensus 262 ~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~~l~~g~~lp~lf~f~~~e~~~~~~ 341 (364)
T KOG0658|consen 262 FPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNTKLPNGRPLPPLFNFKRAELGISPE 341 (364)
T ss_pred CcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCccCcCCCcCCCccCchHHHhccchH
Confidence 99999999999899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHhhcCCCCCCCCC
Q 018619 330 LVNKLIPDHVKRQLGLNFLHPAG 352 (353)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
..+.++|.+.+...+....++++
T Consensus 342 ~~~~l~p~~~~~~~~~~~~~~~~ 364 (364)
T KOG0658|consen 342 LVNVLIPEHLREQEKDKILCESA 364 (364)
T ss_pred HHHhhccHhhhhhccccccccCC
Confidence 99999999999998887777653
No 2
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7e-64 Score=415.40 Aligned_cols=280 Identities=35% Similarity=0.688 Sum_probs=248.0
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+.|+....+|+|+||+||+|+++.||+.||||++.... +...||+++|++++|||+|.++++| .....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence 67999999999999999999999999999999996543 3445899999999999999999999 666679
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++|+|||+.++++.+..+ ...+++..++.+++|++.|+.|+|+ ++++||||||+|||++. ++.+||||||+|+..
T Consensus 77 hLVFE~~dhTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk-~n~IHRDIKPENILit~-~gvvKLCDFGFAR~L 151 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHK-NNCIHRDIKPENILITQ-NGVVKLCDFGFARTL 151 (396)
T ss_pred EEEeeecchHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhh-cCeecccCChhheEEec-CCcEEeccchhhHhh
Confidence 999999999988888763 4678999999999999999999999 89999999999999996 899999999999988
Q ss_pred c-cCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh--hc
Q 018619 165 I-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR--CM 241 (353)
Q Consensus 165 ~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 241 (353)
. .++..+.++.|+||+|||++.|+..|+.++||||+||++.||++|.+.|++..+.+++..|.+.+|.-.....+ ..
T Consensus 152 ~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~ 231 (396)
T KOG0593|consen 152 SAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSS 231 (396)
T ss_pred cCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhcc
Confidence 7 55566789999999999999998889999999999999999999999999999999999999999988876544 44
Q ss_pred CcCCCCCcCCCCCC-CccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 242 NPNYTDFRFPQIKA-HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
++-|....+|.... .+....++ +++.-+.||+.+||+.||++|++.+|+|.||||.++.
T Consensus 232 N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 232 NPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred CCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHH
Confidence 56677777776543 34444454 4788999999999999999999999999999997654
No 3
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-63 Score=421.76 Aligned_cols=322 Identities=38% Similarity=0.635 Sum_probs=271.7
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeec------cccchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+.....|...+.||+|+||.|+.|.++.+|+.||||++.. ..++..||+++|+.++|+||+.+.+++.......
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 3445667778999999999999999999999999999863 2345568999999999999999999987644445
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
-..+|+|+|+|+.+|...++. +..+++..++.+++||+.||+|+|+ .+++||||||+|++++. +..+||||||+
T Consensus 98 f~DvYiV~elMetDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHS-AnViHRDLKPsNll~n~-~c~lKI~DFGL 171 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHS-ANVIHRDLKPSNLLLNA-DCDLKICDFGL 171 (359)
T ss_pred cceeEEehhHHhhHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhc-ccccccccchhheeecc-CCCEEeccccc
Confidence 556999999999888877764 5569999999999999999999999 79999999999999997 88899999999
Q ss_pred cccccc---CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 161 AKQLIA---GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 161 a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
|+.... ....+.++.|.||+|||++.....|+.+.||||+|||+.||++|++.|.+.+..+++..|++.+|+|+.+.
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 998764 34446789999999999998888999999999999999999999999999999999999999999999888
Q ss_pred HhhcCcCC-CC--CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCCCCCCCCCC
Q 018619 238 IRCMNPNY-TD--FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLP 314 (353)
Q Consensus 238 ~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~~~~~~~~~ 314 (353)
+....... .. ..+|..+..+|...|+ ++++++.||+.+||.+||.+|+|++|+|+|||++.+.++........ .+
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~-~~ 329 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQP-IF 329 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCC-CC
Confidence 87655221 11 2467778889999888 79999999999999999999999999999999999988765532221 11
Q ss_pred CCCCchhhhccCCHHHHhhccHHHHHh
Q 018619 315 PLFNFKQELSGASPELVNKLIPDHVKR 341 (353)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (353)
.. .+.. .+.+.+++++..++..
T Consensus 330 ~~----~~~~-~~~~~~r~~i~~e~~~ 351 (359)
T KOG0660|consen 330 DS----FEHE-LTEEELRELIYKEILD 351 (359)
T ss_pred cc----cccc-ccHHHHHHHHHHHHHh
Confidence 11 2222 6778888888887653
No 4
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-64 Score=439.35 Aligned_cols=288 Identities=37% Similarity=0.653 Sum_probs=257.7
Q ss_pred eeeeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccc-----hHHHHHHHHHcC-CCceeecceeeeecC
Q 018619 4 VCCILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-----KNRELQLMRVMD-HPNVISLKHCFFSTT 77 (353)
Q Consensus 4 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 77 (353)
+.+....++|.+++.||.|.||.||+|+.+.+|+.||||++++.... ..||+..|++++ ||||+++.+++.+..
T Consensus 3 ~~~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~ 82 (538)
T KOG0661|consen 3 LTQVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND 82 (538)
T ss_pred ceehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC
Confidence 34566789999999999999999999999999999999988654322 238999999998 999999999985433
Q ss_pred CCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 78 SKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
. .+|+|||||+.+|+++++.+ +..|++..++.|+.||+.||+|+|. +|+.|||+||+|||+.. +..|||+|
T Consensus 83 ~----~L~fVfE~Md~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk-~GfFHRDlKPENiLi~~-~~~iKiaD 153 (538)
T KOG0661|consen 83 R----ILYFVFEFMDCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHK-HGFFHRDLKPENILISG-NDVIKIAD 153 (538)
T ss_pred c----eEeeeHHhhhhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHh-cCcccccCChhheEecc-cceeEecc
Confidence 2 59999999999999999873 7889999999999999999999999 89999999999999996 77899999
Q ss_pred eccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 158 FGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 158 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
||+|+...+....+.++.|+||+|||+++....|+.+.|||++|||++|+.+-++.|++.++.|++.+|.+.+|+|....
T Consensus 154 FGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~ 233 (538)
T KOG0661|consen 154 FGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDS 233 (538)
T ss_pred cccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred Hhhc--CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 238 IRCM--NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 238 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
+..- ..+...+.+|.....+....++. .++++.++|.+||++||.+||||+|+|+||||+.-.
T Consensus 234 ~~eg~~La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 234 WPEGYNLASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred chhHHHHHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 5431 12234567788777777777776 999999999999999999999999999999997543
No 5
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.3e-61 Score=392.79 Aligned_cols=277 Identities=39% Similarity=0.725 Sum_probs=243.3
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.+|...+.||+|.||.||+|++..||+.||||++.... ....||++.|+.++|+||+.++++| .....+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F-----~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF-----PHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----cCCCce
Confidence 57999999999999999999999999999999996432 2345999999999999999999999 444458
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
.+|+||++.+|...++. ....++...++.|+.+++.|++|||+ +.|+||||||.|+|+++ ++.+||+|||+|+.+
T Consensus 77 ~lVfEfm~tdLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~-~~IlHRDlKPnNLLis~-~g~lKiADFGLAr~f 151 (318)
T KOG0659|consen 77 SLVFEFMPTDLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHS-KWILHRDLKPNNLLISS-DGQLKIADFGLARFF 151 (318)
T ss_pred EEEEEeccccHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHh-hhhhcccCCccceEEcC-CCcEEeecccchhcc
Confidence 89999999999888875 56789999999999999999999999 89999999999999997 899999999999987
Q ss_pred ccCCCcc-eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC-
Q 018619 165 IAGEANI-SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN- 242 (353)
Q Consensus 165 ~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (353)
.+..... ..+.|+||+|||++.|...|+..+||||.|||+.||+.|.+.|++.++.+++..|.+.+|+|..+.+..+.
T Consensus 152 ~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 152 GSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred CCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccc
Confidence 7655443 34789999999999999999999999999999999999999999999999999999999999999887765
Q ss_pred -cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 243 -PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
++|..+. ..+..+....|+ ..++++.||+.+||.+||.+|+|+.|+|+||||+..
T Consensus 232 lpdY~~~~--~~P~~~~~~lf~-aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 232 LPDYVKIQ--QFPKPPLNNLFP-AASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL 287 (318)
T ss_pred cccHHHHh--cCCCCccccccc-cccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence 3343332 333344444444 478899999999999999999999999999999973
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-61 Score=416.73 Aligned_cols=257 Identities=32% Similarity=0.495 Sum_probs=213.6
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----------cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----------RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
..+.|.+.+.||+|+||.|.+|..+.||+.||||++.++. ....+|+++|++|+|||||++++.|
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f---- 245 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF---- 245 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee----
Confidence 4678999999999999999999999999999999997542 1225899999999999999999999
Q ss_pred CCCceeEEEEeccccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC--CCCcEE
Q 018619 78 SKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP--LTHQVK 154 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~--~~~~vk 154 (353)
+...+.|+||||++|+ |.+. ...++.+.+...+.+++||+.|+.|||+ .||+||||||+|||+.. ++..+|
T Consensus 246 -~~~ds~YmVlE~v~GGeLfd~----vv~nk~l~ed~~K~~f~Qll~avkYLH~-~GI~HRDiKPeNILl~~~~e~~llK 319 (475)
T KOG0615|consen 246 -EVPDSSYMVLEYVEGGELFDK----VVANKYLREDLGKLLFKQLLTAVKYLHS-QGIIHRDIKPENILLSNDAEDCLLK 319 (475)
T ss_pred -ecCCceEEEEEEecCccHHHH----HHhccccccchhHHHHHHHHHHHHHHHH-cCcccccCCcceEEeccCCcceEEE
Confidence 4444589999999964 4333 3467889999999999999999999999 79999999999999974 236799
Q ss_pred EeeeccccccccCCCcceeeeeceeeChhhhhCCC--CCCccccchhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Q 018619 155 ICDFGSAKQLIAGEANISYICSRFYRAPELIFGAT--EYTTSIDIWSAGCVLAELLLGQPLFPGENAVD-QLVEIIKVLG 231 (353)
Q Consensus 155 l~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 231 (353)
|+|||+|+.........+.+|||.|.|||++.+.. .+..++|+||+||+||.+++|.+||.+..... ...+|.+.
T Consensus 320 ItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G-- 397 (475)
T KOG0615|consen 320 ITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG-- 397 (475)
T ss_pred ecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC--
Confidence 99999999888777788899999999999996542 34558899999999999999999998765544 33333331
Q ss_pred CCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 232 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.+.+ ....+..+|+++++||.+||..||++|||++|+|+||||+..
T Consensus 398 ---------------~y~f--------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 398 ---------------RYAF--------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA 443 (475)
T ss_pred ---------------cccc--------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence 1111 111224589999999999999999999999999999999864
No 7
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.9e-60 Score=396.08 Aligned_cols=283 Identities=33% Similarity=0.575 Sum_probs=246.1
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+.|+.+..|++|.||.||+|+++.|++.||+|+++.+.. ...||+.+|.+.+|||||.+.++.....-. .
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d---~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD---K 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc---e
Confidence 4689999999999999999999999999999999965432 225999999999999999999988654433 3
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+|+|||||..+|..++.. -.+++...+++.++.|++.|++|||. +.|+||||||+|+|++. .|.+||+|||+|+.
T Consensus 152 iy~VMe~~EhDLksl~d~---m~q~F~~~evK~L~~QlL~glk~lH~-~wilHRDLK~SNLLm~~-~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 152 IYIVMEYVEHDLKSLMET---MKQPFLPGEVKTLMLQLLRGLKHLHD-NWILHRDLKTSNLLLSH-KGILKIADFGLARE 226 (419)
T ss_pred eeeeHHHHHhhHHHHHHh---ccCCCchHHHHHHHHHHHHHHHHHhh-ceeEecccchhheeecc-CCcEEecccchhhh
Confidence 889999999998888875 34789999999999999999999999 89999999999999995 88999999999998
Q ss_pred cccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 164 LIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 164 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
+.+... .+..+-|.||+|||++.|...|+++.|+||+|||+.||+++.+.|.+....+++.+|++.+|.|+...+....
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 876643 4556789999999999999999999999999999999999999999999999999999999999987665432
Q ss_pred --cCCCCCcCCCCCCCccccccCCC-CChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 243 --PNYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 243 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
+....+.++...-.+....|+.. +++...+|++++|.+||.+|+||.|+|.|+||...
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 22223455555556666666654 78999999999999999999999999999999974
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-59 Score=423.38 Aligned_cols=248 Identities=33% Similarity=0.542 Sum_probs=221.9
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+|...+.||+|||++||.+++..+|+.||+|++.+. +....+|+++.+.|+|||||+++++| ++..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F-----EDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF-----EDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe-----ecCCc
Confidence 5799999999999999999999999999999999762 34456899999999999999999999 77777
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+|.|+|. ++|.++++ ..++++|.+++.++.||+.||.|||+ ++|+|||||..|+++++ +.+|||+|||+|.
T Consensus 93 VYivLELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~-~~IiHRDLKLGNlfL~~-~~~VKIgDFGLAt 166 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHS-LGIIHRDLKLGNLFLNE-NMNVKIGDFGLAT 166 (592)
T ss_pred eEEEEEecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHh-cCceecccchhheeecC-cCcEEecccceee
Confidence 999999999 55555554 56889999999999999999999999 79999999999999996 7889999999999
Q ss_pred ccccC-CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAG-EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
....+ +...+.+|||.|.|||++.. ...+..+||||+||+||.|+.|++||...+-.+.+.+|..
T Consensus 167 ~le~~~Erk~TlCGTPNYIAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~------------- 232 (592)
T KOG0575|consen 167 QLEYDGERKKTLCGTPNYIAPEVLNK-SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL------------- 232 (592)
T ss_pred eecCcccccceecCCCcccChhHhcc-CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh-------------
Confidence 87744 67788999999999999974 4599999999999999999999999999988888887766
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
.++.+ |..+|.+++|||.+||+.||.+|||++++|.|+||++
T Consensus 233 ----~~Y~~------------P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 233 ----NEYSM------------PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred ----cCccc------------ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 23333 3578999999999999999999999999999999954
No 9
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2e-58 Score=430.81 Aligned_cols=329 Identities=53% Similarity=0.982 Sum_probs=282.2
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCC---CCceeEEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTS---KNELFLNL 86 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~~~~l 86 (353)
..+|.+.+.||+|+||.||+|.+..+++.||||++..+.....+|+.+++.++||||++++++|+.... ....++++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~l 144 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNV 144 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEE
Confidence 468999999999999999999999999999999998777677789999999999999999988754332 23456889
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
||||+++++...+..+......+++..++.++.||+.||+|||+ +||+||||||+|||++..++.+||+|||+|+....
T Consensus 145 vmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~-~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~ 223 (440)
T PTZ00036 145 VMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS-KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLA 223 (440)
T ss_pred EEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCcCHHHEEEcCCCCceeeeccccchhccC
Confidence 99999999888887766677889999999999999999999999 79999999999999986556899999999987766
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
........||+.|+|||++.+...++.++||||+||++|+|++|.+||.+.+..+.+.++++.++.|..+.+..+.+.+.
T Consensus 224 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~ 303 (440)
T PTZ00036 224 GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYA 303 (440)
T ss_pred CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhh
Confidence 55556678899999999987766789999999999999999999999999999999999999999999999888888888
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCCCCC-CCCCCCCCCchh-hhc
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPN-GRPLPPLFNFKQ-ELS 324 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~~~~-~~~~~~~~~~~~-~~~ 324 (353)
+..++......+...++...++++++||.+||++||.+|+|+.|+|+||||+.++......+. ...++.+.++.. +..
T Consensus 304 ~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (440)
T PTZ00036 304 DIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFNFCDAEIK 383 (440)
T ss_pred cccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcccccCCCCCCCCCCCcCCCHHHHh
Confidence 888888777778888888899999999999999999999999999999999998776544443 234566666654 334
Q ss_pred cCCHHHHhhccHHHH
Q 018619 325 GASPELVNKLIPDHV 339 (353)
Q Consensus 325 ~~~~~~~~~~~~~~~ 339 (353)
+...+....+++...
T Consensus 384 ~~~~~~~~~~~~~~~ 398 (440)
T PTZ00036 384 EMSDACRRKIIPKCT 398 (440)
T ss_pred hCCHHHHHHHhhHHH
Confidence 666666666665443
No 10
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-59 Score=413.94 Aligned_cols=282 Identities=35% Similarity=0.583 Sum_probs=239.7
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
...+.|+.+++||+|.||.||+|++..||+.||+|++..+. ....||+.||++|+||||+++.+..+.. ..
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~ 190 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LS 190 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CC
Confidence 34578999999999999999999999999999999997554 2335999999999999999999988654 23
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+|+|+|||+.+|..++.. ..-.|++.++..++.||+.||+|||+ +||+|||||.+|||||. +|++||+|||+|
T Consensus 191 ~siYlVFeYMdhDL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~-~gvlHRDIK~SNiLidn-~G~LKiaDFGLA 265 (560)
T KOG0600|consen 191 GSIYLVFEYMDHDLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHS-RGVLHRDIKGSNILIDN-NGVLKIADFGLA 265 (560)
T ss_pred ceEEEEEecccchhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhh-cCeeeccccccceEEcC-CCCEEeccccce
Confidence 35999999999988777653 56689999999999999999999999 89999999999999995 899999999999
Q ss_pred cccccCC--CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 162 KQLIAGE--ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 162 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
+.+.... ..+..+.|.||+|||+++|...|+.++|+||+||||.||++|++.|++.+..+++..|.+..|.|....+.
T Consensus 266 r~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 266 RFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP 345 (560)
T ss_pred eeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence 9665544 45677889999999999999999999999999999999999999999999999999999999999988776
Q ss_pred hcCcC-CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 240 CMNPN-YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 240 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
..... +..+.-...-.+...+. -+.+++.+.+|+.+||..||.+|.||.++|+|+||.
T Consensus 346 ~~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 346 VSKLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT 404 (560)
T ss_pred cccCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence 32211 11111111112233333 356899999999999999999999999999999994
No 11
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-59 Score=412.29 Aligned_cols=258 Identities=33% Similarity=0.574 Sum_probs=227.4
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHc-CCCceeecceeeeecCCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVM-DHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 80 (353)
...+|..++.||+|+|++|++|+++.+++.||||++.+. .....+|..+|.+| +||.|++++-.| ++
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF-----QD 145 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF-----QD 145 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----ec
Confidence 346899999999999999999999999999999988654 23445799999999 899999999888 66
Q ss_pred ceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
...+|+|+||++ |+|++++..+ +.|++..++.++.||+.||+|||+ +|||||||||+|||+|+ ++.+||+|||
T Consensus 146 ~~sLYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~-~GIIHRDlKPENILLd~-dmhikITDFG 219 (604)
T KOG0592|consen 146 EESLYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHS-NGIIHRDLKPENILLDK-DGHIKITDFG 219 (604)
T ss_pred ccceEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeEcC-CCcEEEeecc
Confidence 666999999999 6777777754 889999999999999999999999 89999999999999996 8999999999
Q ss_pred cccccccCCC--------------cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 018619 160 SAKQLIAGEA--------------NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 225 (353)
Q Consensus 160 ~a~~~~~~~~--------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~ 225 (353)
.|+.+.+... ..+.+||..|.+||++.. ...++.+|+|+||||+|+|+.|.+||.+.++.-..++
T Consensus 220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk 298 (604)
T KOG0592|consen 220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK 298 (604)
T ss_pred ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH
Confidence 9987643211 145899999999999954 5589999999999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCC
Q 018619 226 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 305 (353)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~ 305 (353)
|++. ++. |+.++++.++|||+++|..||++|+|+.||.+||||..+.|.+.
T Consensus 299 I~~l-----------------~y~------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nl 349 (604)
T KOG0592|consen 299 IQAL-----------------DYE------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENL 349 (604)
T ss_pred HHHh-----------------ccc------------CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhhh
Confidence 9884 333 34578999999999999999999999999999999999998875
Q ss_pred CC
Q 018619 306 RL 307 (353)
Q Consensus 306 ~~ 307 (353)
+-
T Consensus 350 w~ 351 (604)
T KOG0592|consen 350 WQ 351 (604)
T ss_pred hh
Confidence 53
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-58 Score=394.74 Aligned_cols=259 Identities=31% Similarity=0.498 Sum_probs=224.2
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
.+..+.|++.++||+|+||+||.++.+.|++.||+|++.+.. .....|..+|..++||+||+++-.| +
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF-----Q 95 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF-----Q 95 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-----c
Confidence 355789999999999999999999999999999999886543 3345799999999999999998888 6
Q ss_pred CceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 80 NELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 80 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
+...+|+|+||+.|+ .|..+++..+.+++..++.|+.+|+.||.|||+ +|||||||||+|||+|. +|.++|+|||
T Consensus 96 t~~kLylVld~~~GG---eLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~-~gIiyRDlKPENILLd~-~GHi~LtDFg 170 (357)
T KOG0598|consen 96 TEEKLYLVLDYLNGG---ELFYHLQREGRFSEDRARFYLAEIVLALGYLHS-KGIIYRDLKPENILLDE-QGHIKLTDFG 170 (357)
T ss_pred cCCeEEEEEeccCCc---cHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHeeecC-CCcEEEeccc
Confidence 667799999999975 333344567899999999999999999999999 79999999999999996 8889999999
Q ss_pred ccccccc-CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 160 SAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 160 ~a~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
+|+.... +....+.+||+.|||||++.+. .|+.++|+||||+++|+|++|.+||.+.+......+|.+.-.
T Consensus 171 L~k~~~~~~~~t~tfcGT~eYmAPEil~~~-gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~------- 242 (357)
T KOG0598|consen 171 LCKEDLKDGDATRTFCGTPEYMAPEILLGK-GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL------- 242 (357)
T ss_pred cchhcccCCCccccccCCccccChHHHhcC-CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC-------
Confidence 9995444 4455667999999999999876 599999999999999999999999999998888888776310
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC----CHHHHhcCcccccccCCC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC----TALEACAHPFFDELREPN 304 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~----t~~~~l~hp~f~~~~~~~ 304 (353)
...+..++.++++||+++|+.||++|. ++.++-+||||..++|..
T Consensus 243 ---------------------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~ 291 (357)
T KOG0598|consen 243 ---------------------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEK 291 (357)
T ss_pred ---------------------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHH
Confidence 011234899999999999999999996 688999999999998764
No 13
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-58 Score=393.82 Aligned_cols=255 Identities=31% Similarity=0.567 Sum_probs=215.2
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.+.+..+.||+|+.|+||+|+|+.|++.+|+|++... ++.+.+|+++++..+||+||++|++|+.... .++
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~----~is 154 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE----EIS 154 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc----eEE
Confidence 3677889999999999999999999999999999432 3445689999999999999999999976542 388
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
|+||||++ +|...+.. .++++|.....++.++++||.|||+.++||||||||+|||+++ .|.|||||||.++.+
T Consensus 155 I~mEYMDgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs-kGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS-KGEVKICDFGVSGIL 229 (364)
T ss_pred eehhhcCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc-CCCEEeccccccHHh
Confidence 99999995 55555543 4889999999999999999999995379999999999999997 899999999999987
Q ss_pred ccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE-----NAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
... ...+++||..|||||.+.+. .|+.++||||||+.++||++|+.||... +..+.+..|.. +.|+.
T Consensus 230 vnS-~a~tfvGT~~YMsPERi~g~-~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~--~ppP~---- 301 (364)
T KOG0581|consen 230 VNS-IANTFVGTSAYMSPERISGE-SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD--EPPPR---- 301 (364)
T ss_pred hhh-hcccccccccccChhhhcCC-cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc--CCCCC----
Confidence 666 55789999999999999775 4999999999999999999999999875 44455544443 11110
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCC-CChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
++.. +|+++++||.+||++||.+|+|+.|+++|||+++....+
T Consensus 302 ----------------------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~ 345 (364)
T KOG0581|consen 302 ----------------------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN 345 (364)
T ss_pred ----------------------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence 2233 799999999999999999999999999999999865543
No 14
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.8e-56 Score=379.84 Aligned_cols=290 Identities=34% Similarity=0.686 Sum_probs=242.2
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHcCCCc-eeecceeeeecCC-CCc
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRVMDHPN-VISLKHCFFSTTS-KNE 81 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~-~~~ 81 (353)
...|..++.||+|+||+||+|+.+.+|+.||+|++.-+.. ...+|+.+++.++|+| |+.+++++..... ...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 3457788889999999999999999999999999964432 3369999999999999 9999999865442 233
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+++|+||++.+|...+.........++...++.++.||+.||+|||+ ++|+||||||+||||++ ++.+||+|||+|
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~-~~IlHRDLKPQNlLi~~-~G~lKlaDFGlA 167 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS-HGILHRDLKPQNLLISS-SGVLKLADFGLA 167 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCcceEEECC-CCcEeeeccchH
Confidence 4688999999999988888754433567889999999999999999999 89999999999999997 899999999999
Q ss_pred cccc-cCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 162 KQLI-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 162 ~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
+... +.......++|.+|+|||++.|...|+...||||+|||++||+++++.|.+..+.+++..|.+.+|+|....+..
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 9665 334456778999999999999998899999999999999999999999999999999999999999999876654
Q ss_pred cC--cCCCCCcCCCCC-CCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 241 MN--PNYTDFRFPQIK-AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 241 ~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
.. +.+.. .++... ...+.... ++.+++..|++.+||++||.+|.|+..+|.||||......
T Consensus 248 v~~~~~~k~-~f~~~~~~~~l~~~~-~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 248 VSSLPDYKA-PFPKWPGPKDLSSIL-PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred ccccccccc-cCcCCCCccchHHhc-cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 32 22221 222222 22333333 2355799999999999999999999999999999987544
No 15
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-57 Score=372.41 Aligned_cols=254 Identities=29% Similarity=0.489 Sum_probs=222.9
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
..-++|+..+.||.|+||+|.+++++.+|..||+|++.++. ....+|..+|+.+.||++++++..| .+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----cc
Confidence 34568999999999999999999999999999999997653 2334799999999999999999888 56
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
...+|+||||++|+ .+..+....+++++..++.++.||+.||+|||+ ++|++|||||+|||+|+ +|.+||+|||+
T Consensus 116 ~~~lymvmeyv~GG---ElFS~Lrk~~rF~e~~arFYAAeivlAleylH~-~~iiYRDLKPENiLlD~-~G~iKitDFGF 190 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGG---ELFSYLRKSGRFSEPHARFYAAEIVLALEYLHS-LDIIYRDLKPENLLLDQ-NGHIKITDFGF 190 (355)
T ss_pred CCeEEEEEeccCCc---cHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHh-cCeeeccCChHHeeecc-CCcEEEEeccc
Confidence 66699999999975 333444567899999999999999999999999 79999999999999997 88899999999
Q ss_pred ccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 161 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 161 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
|+..... ..+.+|||.|+|||++.. .+|+.++|+|||||++|||+.|.+||...+....+.+|.+.
T Consensus 191 AK~v~~r--T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~----------- 256 (355)
T KOG0616|consen 191 AKRVSGR--TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG----------- 256 (355)
T ss_pred eEEecCc--EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC-----------
Confidence 9976554 667899999999999965 45999999999999999999999999999999988888873
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCC
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 303 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~ 303 (353)
+.. ||..++++++|||+++|+.|-++|. ...++..||||+.+.|.
T Consensus 257 ------~v~------------fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~ 306 (355)
T KOG0616|consen 257 ------KVK------------FPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWE 306 (355)
T ss_pred ------ccc------------CCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHH
Confidence 222 4467899999999999999999995 56899999999998775
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.6e-56 Score=396.50 Aligned_cols=270 Identities=31% Similarity=0.498 Sum_probs=224.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+..++|.++++||+||||.||+|+.+.||+.||+|++.+.. .-...|-++|...++|+||+++-.| ++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-----QD 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-----QD 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe-----cC
Confidence 46789999999999999999999999999999999997653 2234688899999999999999888 77
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
..++|+||||++| ++..+|. ..+.|++..++.++.+++.|++.+|+ .|+|||||||+|+|||. .|.+||+|||
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~----~~~~L~e~~arfYiaE~vlAI~~iH~-~gyIHRDIKPdNlLiD~-~GHiKLSDFG 286 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLM----RKDTLTEDWARFYIAETVLAIESIHQ-LGYIHRDIKPDNLLIDA-KGHIKLSDFG 286 (550)
T ss_pred CCeeEEEEEecCCccHHHHHH----hcCcCchHHHHHHHHHHHHHHHHHHH-cCcccccCChhheeecC-CCCEeecccc
Confidence 7779999999996 4444443 56899999999999999999999999 79999999999999997 8889999999
Q ss_pred ccccccc------------------------CC-----C-------------------cceeeeeceeeChhhhhCCCCC
Q 018619 160 SAKQLIA------------------------GE-----A-------------------NISYICSRFYRAPELIFGATEY 191 (353)
Q Consensus 160 ~a~~~~~------------------------~~-----~-------------------~~~~~~t~~y~aPE~~~~~~~~ 191 (353)
+|..... .. . ..+.+|||.|+|||++.+.. |
T Consensus 287 Ls~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y 365 (550)
T KOG0605|consen 287 LSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-Y 365 (550)
T ss_pred ccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-C
Confidence 9853211 00 0 01358999999999998865 9
Q ss_pred CccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHH
Q 018619 192 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI 271 (353)
Q Consensus 192 ~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (353)
+..+|+||||||+|||+.|.+||.+.+..+...+|+..-.. +.+|. ...++++++
T Consensus 366 ~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~---------------l~fP~----------~~~~s~eA~ 420 (550)
T KOG0605|consen 366 GKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET---------------LKFPE----------EVDLSDEAK 420 (550)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh---------------ccCCC----------cCcccHHHH
Confidence 99999999999999999999999999999999998875211 11111 124789999
Q ss_pred HHHHHhcCcCCCCCCC---HHHHhcCcccccccCCCCCCCCCCCCCC
Q 018619 272 DLASRLLQYSPSLRCT---ALEACAHPFFDELREPNARLPNGRPLPP 315 (353)
Q Consensus 272 ~li~~~L~~dp~~R~t---~~~~l~hp~f~~~~~~~~~~~~~~~~~~ 315 (353)
|||.+||. ||.+|+. ++||.+||||+.+.|.........-+|.
T Consensus 421 DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~apfvP~ 466 (550)
T KOG0605|consen 421 DLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREMPAPFVPQ 466 (550)
T ss_pred HHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhcCCCCCCCC
Confidence 99999999 9999985 8999999999999987655433333333
No 17
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-56 Score=401.79 Aligned_cols=254 Identities=34% Similarity=0.550 Sum_probs=226.6
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
+-|.+++.||.|+.|.|.+|+|..||+..|||++.+. ...+++|+-+|+.+.|||++.++++| ++...
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~~~ 86 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENKQH 86 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccCce
Confidence 4589999999999999999999999999999999876 45678999999999999999999999 66677
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+|.||++| .|.+++ ...+++++.++++++.||+.|+.|||. .+|+||||||+|+|+|. .++|||+|||+|.
T Consensus 87 lylvlEyv~gGELFdyl----v~kG~l~e~eaa~ff~QIi~gv~yCH~-~~icHRDLKpENlLLd~-~~nIKIADFGMAs 160 (786)
T KOG0588|consen 87 LYLVLEYVPGGELFDYL----VRKGPLPEREAAHFFRQILDGVSYCHA-FNICHRDLKPENLLLDV-KNNIKIADFGMAS 160 (786)
T ss_pred EEEEEEecCCchhHHHH----HhhCCCCCHHHHHHHHHHHHHHHHHhh-hcceeccCCchhhhhhc-ccCEeeeccceee
Confidence 9999999995 444444 457899999999999999999999999 69999999999999997 5669999999999
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
...++.-..+.+|+|.|.|||++.|.++.+.++||||+|||||.|++|++||.+.+-...+.++.+
T Consensus 161 Le~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~-------------- 226 (786)
T KOG0588|consen 161 LEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQR-------------- 226 (786)
T ss_pred cccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHc--------------
Confidence 888888888899999999999999998889999999999999999999999998777666666554
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
+.|.+| ..+|+++++||++||..||++|+|.+||+.|||+.+.....
T Consensus 227 ---G~f~MP------------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~ 273 (786)
T KOG0588|consen 227 ---GVFEMP------------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLP 273 (786)
T ss_pred ---CcccCC------------CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCC
Confidence 344444 47999999999999999999999999999999999876543
No 18
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.3e-54 Score=392.70 Aligned_cols=280 Identities=35% Similarity=0.602 Sum_probs=231.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccch---HHHHHHHHHcC-C-----CceeecceeeeecCCCCc
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRVMD-H-----PNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~E~~~l~~l~-h-----~~iv~~~~~~~~~~~~~~ 81 (353)
.+|.+.++||+|+||.|-+|.+..|++.||||+++...... ..|+.+|..++ | -|+|+++++| ...
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~fr 260 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YFR 260 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----ccc
Confidence 39999999999999999999999999999999998776544 36899999986 3 4899999999 555
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC-CCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP-LTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~-~~~~vkl~Dfg~ 160 (353)
.++|||+|.++.+|+++++.. .-..++...++.++.||+.||.+||+ .||||+||||+|||+.. ....|||+|||.
T Consensus 261 ~HlciVfELL~~NLYellK~n--~f~Glsl~~ir~~~~Qil~~L~~L~~-l~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 261 NHLCIVFELLSTNLYELLKNN--KFRGLSLPLVRKFAQQILTALLFLHE-LGIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred cceeeeehhhhhhHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCChhheeeccCCcCceeEEeccc
Confidence 669999999999999999864 33559999999999999999999999 79999999999999953 345799999999
Q ss_pred ccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 161 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 161 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
|.... ....+++.++.|+|||+++|.+ |+.+.||||||||++||++|.++|++.+..+++..|++.+|.|+...+..
T Consensus 338 Sc~~~--q~vytYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 338 SCFES--QRVYTYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred ccccC--CcceeeeeccccccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 98543 3334889999999999999976 99999999999999999999999999999999999999999999887753
Q ss_pred cCcCCCCCcC----CC-----------------------------C-CCCccccccCCCCChhHHHHHHHhcCcCCCCCC
Q 018619 241 MNPNYTDFRF----PQ-----------------------------I-KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 286 (353)
Q Consensus 241 ~~~~~~~~~~----~~-----------------------------~-~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 286 (353)
-......++- +. - ..+.|.......-...+.|||.+||.+||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 3222111111 00 0 112222222222335679999999999999999
Q ss_pred CHHHHhcCccccccc
Q 018619 287 TALEACAHPFFDELR 301 (353)
Q Consensus 287 t~~~~l~hp~f~~~~ 301 (353)
|+.++|+||||....
T Consensus 495 tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 495 TPAQALNHPFLTGTS 509 (586)
T ss_pred CHHHHhcCccccccc
Confidence 999999999998543
No 19
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-56 Score=369.13 Aligned_cols=254 Identities=28% Similarity=0.496 Sum_probs=214.4
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeec------cccchHHHHHHHHHcCCCceeecce-eeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRVMDHPNVISLKH-CFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~ 83 (353)
..|.+.++||+|.||.||+|.+..+|+.+|.|.+.- .+...-+|+.+|++|+|||||++++ .| . ++...
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f-~---~~~ev 94 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF-I---EDNEV 94 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh-h---ccchh
Confidence 469999999999999999999999999999998852 2334458999999999999999987 33 1 33334
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHc--CC-CeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHT--VP-RVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~--~~-~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
++||||||+ |+|...++++.+....+++..+|.++.|||.||..||+ -+ -|+||||||.||+++. +|.+||+|||
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~-~gvvKLGDfG 173 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA-NGVVKLGDFG 173 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC-CCceeeccch
Confidence 889999999 79999999999999999999999999999999999998 21 3899999999999996 8999999999
Q ss_pred cccccccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 160 SAKQLIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 160 ~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
+++....... ..+++|||.|||||.+.+. +|+.+|||||+||++|||+.-++||.+.+-.+...+|.+.--+|...
T Consensus 174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~-~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~-- 250 (375)
T KOG0591|consen 174 LGRFLSSKTTFAHSLVGTPYYMSPERIHES-GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD-- 250 (375)
T ss_pred hHhHhcchhHHHHhhcCCCcccCHHHHhcC-CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH--
Confidence 9998766554 3578999999999999765 59999999999999999999999999997777766666531111110
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
...|.++..+|.-|+..||..||+. +|++.++..
T Consensus 251 -------------------------~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~~ 284 (375)
T KOG0591|consen 251 -------------------------EHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQS 284 (375)
T ss_pred -------------------------HHhhhHHHHHHHHHccCCcccCCCc-----chHHHHHHH
Confidence 2478999999999999999999987 566665543
No 20
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-55 Score=376.83 Aligned_cols=254 Identities=30% Similarity=0.531 Sum_probs=218.6
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
..++|.+.+.||+|+||+||+|+++.++..||||.+.+.. ....+|+.+|+.++|||||.+++++ ....
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDDD 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecCC
Confidence 4678999999999999999999999999999999996653 3345899999999999999999998 4555
Q ss_pred eEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC--C---CcEEEe
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL--T---HQVKIC 156 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~--~---~~vkl~ 156 (353)
++|+|||||+ |+|..++. ..+.+++..++.++.||+.||++||+ ++||||||||+|||++.. + ..+||+
T Consensus 83 ~i~lVMEyC~gGDLs~yi~----~~~~l~e~t~r~Fm~QLA~alq~L~~-~~IiHRDLKPQNiLLs~~~~~~~~~~LKIA 157 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIR----RRGRLPEATARHFMQQLASALQFLHE-NNIIHRDLKPQNILLSTTARNDTSPVLKIA 157 (429)
T ss_pred eEEEEEEeCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCcceEEeccCCCCCCCceEEec
Confidence 7999999999 56665555 45789999999999999999999999 899999999999999752 1 469999
Q ss_pred eeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 157 DFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 157 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
|||+|+....+....+.+|+|.|||||++.. +.|+.++|+||+|+|+|+|++|++||...+..+.+..+.+.-.
T Consensus 158 DFGfAR~L~~~~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~----- 231 (429)
T KOG0595|consen 158 DFGFARFLQPGSMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE----- 231 (429)
T ss_pred ccchhhhCCchhHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc-----
Confidence 9999999988887788999999999999965 4599999999999999999999999999999888775444211
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
....++..+++.+.+|+...|+.+|.+|.+..+-+.|+++..
T Consensus 232 ---------------------~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 232 ---------------------IVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred ---------------------ccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence 111123446788889999999999999999999999999875
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-54 Score=389.22 Aligned_cols=253 Identities=33% Similarity=0.503 Sum_probs=218.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc---------ccchHHHHHHHHHcC-CCceeecceeeeecC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD---------RRYKNRELQLMRVMD-HPNVISLKHCFFSTT 77 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 77 (353)
...++|.+.+.||+|+||+|++|.+..+++.||+|++.+. .....+|+.+++.++ ||||+++++++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~---- 89 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF---- 89 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE----
Confidence 4467999999999999999999999999999999976543 123458999999999 99999999998
Q ss_pred CCCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
.....+|+|||||.| .|++.+. ..+++.+..++.++.||+.|++|||+ +||+||||||+|||++...+++||+
T Consensus 90 -~t~~~~~ivmEy~~gGdL~~~i~----~~g~l~E~~ar~~F~Qlisav~y~H~-~gi~HRDLK~ENilld~~~~~~Kl~ 163 (370)
T KOG0583|consen 90 -ATPTKIYIVMEYCSGGDLFDYIV----NKGRLKEDEARKYFRQLISAVAYCHS-RGIVHRDLKPENILLDGNEGNLKLS 163 (370)
T ss_pred -ecCCeEEEEEEecCCccHHHHHH----HcCCCChHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEecCCCCCEEEe
Confidence 444449999999996 6665554 36899999999999999999999999 7999999999999999733899999
Q ss_pred eecccccc-ccCCCcceeeeeceeeChhhhhCCC-CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 157 DFGSAKQL-IAGEANISYICSRFYRAPELIFGAT-EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 157 Dfg~a~~~-~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
|||++... .......+.+||+.|+|||++.+.. +-+.++||||+||+||.|++|..||...+.......+.+
T Consensus 164 DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~------ 237 (370)
T KOG0583|consen 164 DFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK------ 237 (370)
T ss_pred ccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc------
Confidence 99999987 4556677889999999999998766 457899999999999999999999999877777766544
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCC-ChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRM-PPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
..+. ++..+ |+++++|+++||..||.+|+|+.+++.||||+.
T Consensus 238 -----------~~~~------------~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 238 -----------GEFK------------IPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred -----------CCcc------------CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1222 23346 999999999999999999999999999999997
No 22
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-54 Score=394.98 Aligned_cols=257 Identities=30% Similarity=0.507 Sum_probs=224.1
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcC-CCceeecceeeeecCC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMD-HPNVISLKHCFFSTTS 78 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 78 (353)
.+.-++|++.++||+|.||+|++|..+.+++.||||.++|+. .....|.+|+...+ ||++++++.+|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 455679999999999999999999999999999999998764 33456888887774 99999999999
Q ss_pred CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 79 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
+...++|+||||+.|+. +.. ....+.+++..++.|+++++.||+|||+ +||||||||.+|||+|. +|.+||+||
T Consensus 439 QT~~~l~fvmey~~Ggd---m~~-~~~~~~F~e~rarfyaAev~l~L~fLH~-~~IIYRDlKLdNiLLD~-eGh~kiADF 512 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGD---LMH-HIHTDVFSEPRARFYAAEVVLGLQFLHE-NGIIYRDLKLDNLLLDT-EGHVKIADF 512 (694)
T ss_pred ccCCeEEEEEEecCCCc---EEE-EEecccccHHHHHHHHHHHHHHHHHHHh-cCceeeecchhheEEcc-cCcEEeccc
Confidence 77777999999999873 322 3355889999999999999999999999 89999999999999997 788999999
Q ss_pred ccccccc-cCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 159 GSAKQLI-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 159 g~a~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
|+|+... .+....+.+|||.|+|||++.+. .|+.++|+|||||+||||+.|+.||.+++..+....|+..
T Consensus 513 GlcKe~m~~g~~TsTfCGTpey~aPEil~e~-~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d-------- 583 (694)
T KOG0694|consen 513 GLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQ-SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND-------- 583 (694)
T ss_pred ccccccCCCCCccccccCChhhcChhhhccC-cccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--------
Confidence 9999755 45566788999999999999665 5999999999999999999999999999999999888762
Q ss_pred HhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCCC
Q 018619 238 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREPN 304 (353)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~~ 304 (353)
+.. +|..+|.++.++++++|.+||++|+. ++++..||||+.+.|..
T Consensus 584 ---------~~~------------yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~ 634 (694)
T KOG0694|consen 584 ---------EVR------------YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDD 634 (694)
T ss_pred ---------CCC------------CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHH
Confidence 111 34568999999999999999999996 57999999999998753
No 23
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-56 Score=361.30 Aligned_cols=258 Identities=30% Similarity=0.481 Sum_probs=221.5
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeec------cccchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
+....++|.+.++||+|+|+.|+++.+..||+.+|+|++.. +.+.+++|+.+-+.|+||||+++.+.+ .
T Consensus 6 ~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~ 80 (355)
T KOG0033|consen 6 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----Q 80 (355)
T ss_pred ccccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----c
Confidence 45668999999999999999999999999999999997742 345667999999999999999999888 6
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC--CCcEEEe
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL--THQVKIC 156 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~--~~~vkl~ 156 (353)
...+.|+|+|++.| +|...+-. ..-+++..+..++.||++||.|+|. +||+|||+||+|+++-+. +.-+||+
T Consensus 81 ~~~~~ylvFe~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~-n~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 81 EESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHS-NGIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred ccceeEEEEecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeeeeccCCCceeec
Confidence 66779999999996 44333322 2557899999999999999999999 899999999999999542 3469999
Q ss_pred eeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 157 DFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 157 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
|||+|....++..-...+|||.|+|||++... +|+.++|||+.|||||-|+.|.+||.+.+..+.+.+|++.
T Consensus 156 ~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkd-py~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g------- 227 (355)
T KOG0033|consen 156 DFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKD-PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAG------- 227 (355)
T ss_pred ccceEEEeCCccccccccCCCcccCHHHhhcC-CCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcc-------
Confidence 99999988866666678999999999999765 4999999999999999999999999999999999888873
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
++.++. +.| .++++++++||++||..||.+|+|+.|+|+|||+.+
T Consensus 228 ----------~yd~~~---~~w-----~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 228 ----------AYDYPS---PEW-----DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred ----------ccCCCC---ccc-----CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 333221 223 458999999999999999999999999999999975
No 24
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.8e-52 Score=369.92 Aligned_cols=277 Identities=33% Similarity=0.650 Sum_probs=229.0
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
-++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ ......
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeE
Confidence 468999999999999999999999999999999885322 2345899999999999999999988 344468
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++||||++++|.+.+.. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++...
T Consensus 79 ~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~-~~~~kl~DfG~~~~~ 153 (288)
T cd07871 79 TLVFEYLDSDLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHK-RKILHRDLKPQNLLINE-KGELKLADFGLARAK 153 (288)
T ss_pred EEEEeCCCcCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECC-CCCEEECcCcceeec
Confidence 89999999988777653 34568899999999999999999999 79999999999999996 788999999999754
Q ss_pred ccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.... ......+++.|+|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+.+..+.+....+.....
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred cCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence 3322 223457799999999987766689999999999999999999999999999999999999999888877654321
Q ss_pred --CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 --NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.+..+.++.....++... ...++++++|||++||++||.+|+|++|+++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINH-APRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred chhhhccccCccCCCchHHh-CCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 222233333333333322 23578999999999999999999999999999998
No 25
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-53 Score=371.82 Aligned_cols=256 Identities=28% Similarity=0.443 Sum_probs=214.3
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------------------cchHHHHHHHHHcCCCceeecc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------------------RYKNRELQLMRVMDHPNVISLK 70 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------------~~~~~E~~~l~~l~h~~iv~~~ 70 (353)
+-++|++.+.||+|.||+|.+|++..+++.||||++.+.. ....+|+.+|+++.|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4578999999999999999999999999999999996532 2345899999999999999999
Q ss_pred eeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCC-CCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC
Q 018619 71 HCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQR-MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL 149 (353)
Q Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~-l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~ 149 (353)
++.-+ .....+|+|+|||..+ .+.. .....+ +++.+++.|+..++.||+|||. +|||||||||+|+|+++
T Consensus 175 EvLDD---P~s~~~YlVley~s~G---~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl~~- 245 (576)
T KOG0585|consen 175 EVLDD---PESDKLYLVLEYCSKG---EVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLLSS- 245 (576)
T ss_pred EeecC---cccCceEEEEEeccCC---cccc-CCCCcccccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEEcC-
Confidence 98833 4445599999999954 2221 234455 9999999999999999999999 79999999999999997
Q ss_pred CCcEEEeeeccccccccC------CCcceeeeeceeeChhhhhC---CCCCCccccchhHHHHHHHHHhCCCCCCCCChH
Q 018619 150 THQVKICDFGSAKQLIAG------EANISYICSRFYRAPELIFG---ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 220 (353)
Q Consensus 150 ~~~vkl~Dfg~a~~~~~~------~~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~ 220 (353)
++++||+|||.+.....+ ......+|||.|+|||.+.+ ....+.+.||||+||+||.|+.|+.||-+....
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 799999999999866322 22345789999999999976 234578999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 221 DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
+...+|++. ...+|.. ..+.++++|||.+||++||++|+++.++..|||..+-
T Consensus 326 ~l~~KIvn~-----------------pL~fP~~----------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 326 ELFDKIVND-----------------PLEFPEN----------PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHHHhcC-----------------cccCCCc----------ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 999888873 1122221 1368899999999999999999999999999999764
No 26
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-53 Score=368.35 Aligned_cols=259 Identities=32% Similarity=0.536 Sum_probs=209.1
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc----ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
..+|...+.||+|+||.||++.+..+|+.+|+|.+... .....+|+.+|+.++|||||++++....... ..++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~---~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN---DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC---eeeE
Confidence 35689999999999999999999999999999998765 3446899999999999999999885322211 4688
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+.|||+++ +|.+.+..+ ++.+++..++.+..|++.||+|||+ +||+||||||+|||++..++.+||+|||+++..
T Consensus 93 i~mEy~~~GsL~~~~~~~---g~~l~E~~v~~ytr~iL~GL~ylHs-~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRY---GGKLPEPLVRRYTRQILEGLAYLHS-KGIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeeccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHh-CCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 99999995 666665542 2279999999999999999999999 899999999999999964578999999999876
Q ss_pred cc----CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IA----GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE-NAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
.. ........||+.|||||++........++||||+||++.||+||..||... ...+.+..+... .
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~---~------ 239 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE---D------ 239 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc---C------
Confidence 53 223446789999999999974222345999999999999999999999873 333333222221 0
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
.. ..++..+|+++++||.+||++||.+||||+++|+|||.++...
T Consensus 240 ---------~~---------P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 240 ---------SL---------PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ---------CC---------CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 01 1255679999999999999999999999999999999987543
No 27
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-52 Score=362.81 Aligned_cols=271 Identities=26% Similarity=0.431 Sum_probs=225.0
Q ss_pred eeeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 5 CCILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
.+..+.+.|++..+||.|..++||+|++..+++.||||++.-+ -..+.+|+..++.++||||++++.+|....+
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~- 98 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSE- 98 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecce-
Confidence 4678899999999999999999999999999999999999533 2445689999999999999999999955444
Q ss_pred CceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
+|+||+||. |++.+++..+-.. .+.|..+..+++++++||.|||+ +|.||||||+.||||++ +|.|||+||
T Consensus 99 ----LWvVmpfMa~GS~ldIik~~~~~--Gl~E~~Ia~iLre~LkaL~YLH~-~G~IHRdvKAgnILi~~-dG~VkLadF 170 (516)
T KOG0582|consen 99 ----LWVVMPFMAGGSLLDIIKTYYPD--GLEEASIATILREVLKALDYLHQ-NGHIHRDVKAGNILIDS-DGTVKLADF 170 (516)
T ss_pred ----eEEeehhhcCCcHHHHHHHHccc--cccHHHHHHHHHHHHHHHHHHHh-cCceecccccccEEEcC-CCcEEEcCc
Confidence 999999999 6888888876544 39999999999999999999999 79999999999999996 899999999
Q ss_pred ccccccccCCCc-----ceeeeeceeeChhhh-hCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 018619 159 GSAKQLIAGEAN-----ISYICSRFYRAPELI-FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 159 g~a~~~~~~~~~-----~~~~~t~~y~aPE~~-~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|.+..+...... ...+||++|||||++ .....|+.++||||||++.+||.+|+.||....+...+...++ +.
T Consensus 171 gvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n~ 248 (516)
T KOG0582|consen 171 GVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--ND 248 (516)
T ss_pred eeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--CC
Confidence 987765443321 345889999999994 4456799999999999999999999999999988887755544 33
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
|+...... ....-.+..+..++++|..||++||++|||++++|+|+||++.+..
T Consensus 249 pp~~~t~~-----------------~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 249 PPTLLTSG-----------------LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred CCCccccc-----------------CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence 32111100 0000113467899999999999999999999999999999986654
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.7e-53 Score=378.35 Aligned_cols=249 Identities=30% Similarity=0.543 Sum_probs=219.0
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccc------hHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY------KNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
++|.+.+.||+|+||.||+++.+.+.+.||||.+.+..+. ..+|+++++.++|||||.+++.| +....+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 6899999999999999999999999999999999765433 45899999999999999999999 666679
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++|+|||.|+|..++. .++.++|+.++.++.+++.||.|||+ ++|+|||+||.|||++. ++.+|+||||+|+.+
T Consensus 77 ~vVte~a~g~L~~il~----~d~~lpEe~v~~~a~~LVsaL~yLhs-~rilhrd~kPqniLl~~-~~~~KlcdFg~Ar~m 150 (808)
T KOG0597|consen 77 WVVTEYAVGDLFTILE----QDGKLPEEQVRAIAYDLVSALYYLHS-NRILHRDMKPQNILLEK-GGTLKLCDFGLARAM 150 (808)
T ss_pred EEEehhhhhhHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHh-cCcccccCCcceeeecC-CCceeechhhhhhhc
Confidence 9999999998877776 57899999999999999999999999 79999999999999996 889999999999987
Q ss_pred ccCCCc-ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEAN-ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..+... .+..|||.|||||++.+ ++|+..+|+||+|||+|||++|++||...........|...-..
T Consensus 151 ~~~t~vltsikGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~----------- 218 (808)
T KOG0597|consen 151 STNTSVLTSIKGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK----------- 218 (808)
T ss_pred ccCceeeeeccCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC-----------
Confidence 765543 45679999999999975 56999999999999999999999999887776666666552111
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.+..+|..+++|+..+|.+||.+|+|-.+++.|||.++-
T Consensus 219 ------------------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 219 ------------------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred ------------------CcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 123589999999999999999999999999999998763
No 29
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.8e-51 Score=367.45 Aligned_cols=283 Identities=33% Similarity=0.568 Sum_probs=219.9
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
..++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++. ....
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~ 77 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-----TKET 77 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-----cCCe
Confidence 3578999999999999999999999999999999886432 23458999999999999999999883 3445
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
.|+||||+.+++.+.+.. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++..
T Consensus 78 ~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~ 152 (303)
T cd07869 78 LTLVFEYVHTDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQ-RYILHRDLKPQNLLISD-TGELKLADFGLARA 152 (303)
T ss_pred EEEEEECCCcCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEECCCCccee
Confidence 899999999988777653 34668999999999999999999999 79999999999999996 78899999999875
Q ss_pred cccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHhhc
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
..... ......+|+.|+|||++.+...++.++||||+||++|+|++|..||.+.. ..+.+..+....+.+....+...
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 153 KSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred ccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccch
Confidence 43222 22345678999999998776668999999999999999999999998754 34556666666666655443321
Q ss_pred Cc--CCCCCcCCCCCCCccccccC-CCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 242 NP--NYTDFRFPQIKAHPWHKVFH-KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 242 ~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
.. .+....+.......+...+. ...++++.+||++||+.||.+|+|+.|+++||||+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 10 00000011111111111111 13567899999999999999999999999999998864
No 30
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.9e-51 Score=371.76 Aligned_cols=318 Identities=37% Similarity=0.647 Sum_probs=239.8
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|++.+.||+|+||.||+|.+..+++.||||++... .....+|+.+++.++||||+++++++..........+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 699999999999999999999999999999988532 12345799999999999999999988655444445688
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+|||||+++|.+.+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||+++...
T Consensus 81 lv~e~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~-~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELMESDLHQVIK----ANDDLTPEHHQFFLYQLLRALKYIHT-ANVFHRDLKPKNILANA-DCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCCCCHHHHHH----hcccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCcEEEccCccccccc
Confidence 999999988777665 34679999999999999999999999 79999999999999996 8899999999997543
Q ss_pred cCCC----cceeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 166 AGEA----NISYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 166 ~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
.... .....+|+.|+|||++.+. ..++.++||||+||++|+|++|++||.+.+....+..+....+.+....+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 3221 1245789999999998542 4588999999999999999999999999888888888888888877665543
Q ss_pred cCcCCCC-C--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCCCCCCCCCCCCC
Q 018619 241 MNPNYTD-F--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLF 317 (353)
Q Consensus 241 ~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~~~~~~~~~~~~ 317 (353)
....... + .+......++...+ ..+++++.++|.+||+.||++|||++++++||||+.+...... +...+.+..
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~-~~~~~~~~~- 311 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKF-PNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVERE-PSAQPITKL- 311 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhc-CCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccccc-cccCccccc-
Confidence 2211000 0 00000111112222 2468899999999999999999999999999999987654322 233333332
Q ss_pred CchhhhccCCHHHHhhccHHH
Q 018619 318 NFKQELSGASPELVNKLIPDH 338 (353)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~ 338 (353)
.+.-+....+.+.+.....++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~ 332 (338)
T cd07859 312 EFEFERRRLTKEDVRELIYRE 332 (338)
T ss_pred cccHHHHhcCHHHHHHHHHHH
Confidence 222233445555555555444
No 31
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-52 Score=371.65 Aligned_cols=251 Identities=29% Similarity=0.496 Sum_probs=216.3
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc----ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
...|...+.||+|+.|.||.|+...+++.||||++... ++.+..|+.+|+..+|+|||.+++.|...+. ++
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~de-----LW 346 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDE-----LW 346 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccce-----eE
Confidence 34788899999999999999999999999999999643 3345689999999999999999999865533 99
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||++| +|.+.+. ...++|.++..+.++++.||+|||. +||+|||||.+|||++. ++.+||+|||+|..+
T Consensus 347 VVMEym~ggsLTDvVt-----~~~~~E~qIA~Icre~l~aL~fLH~-~gIiHrDIKSDnILL~~-~g~vKltDFGFcaqi 419 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVT-----KTRMTEGQIAAICREILQGLKFLHA-RGIIHRDIKSDNILLTM-DGSVKLTDFGFCAQI 419 (550)
T ss_pred EEEeecCCCchhhhhh-----cccccHHHHHHHHHHHHHHHHHHHh-cceeeeccccceeEecc-CCcEEEeeeeeeecc
Confidence 99999996 5555544 3569999999999999999999999 79999999999999996 788999999999987
Q ss_pred ccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.... ...+.+|||+|||||++.. ..|+++.||||||+++.||+-|++||-..++...++.|... |+|...
T Consensus 420 ~~~~~KR~TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~lk------- 490 (550)
T KOG0578|consen 420 SEEQSKRSTMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKLK------- 490 (550)
T ss_pred ccccCccccccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCcC-------
Confidence 7665 4456799999999999954 45999999999999999999999999988888777766653 333221
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
.+..+|+.++||+.+||+.|+.+|++|.++|+||||+.
T Consensus 491 ------------------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 491 ------------------NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred ------------------CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 23569999999999999999999999999999999954
No 32
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-51 Score=355.62 Aligned_cols=275 Identities=27% Similarity=0.445 Sum_probs=226.1
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
.+.-.++++.+.||.|.-|+||+|+.+.++..+|+|++.+.. .+.+-|.+||..++||.+..+|..| +
T Consensus 73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-----e 147 (459)
T KOG0610|consen 73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-----E 147 (459)
T ss_pred ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee-----e
Confidence 345567899999999999999999999999999999997653 2334689999999999999999999 7
Q ss_pred CceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 80 NELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 80 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
...+.|++||||+|+-+..+.+ .+.++.+++..++.++.+++.||+|||- -|||+|||||+||||-+ +|.|-|+||.
T Consensus 148 t~~~~cl~meyCpGGdL~~Lrq-kQp~~~fse~~aRFYaAEvl~ALEYLHm-lGivYRDLKPENILvre-dGHIMLsDFD 224 (459)
T KOG0610|consen 148 TDKYSCLVMEYCPGGDLHSLRQ-KQPGKRFSESAARFYAAEVLLALEYLHM-LGIVYRDLKPENILVRE-DGHIMLSDFD 224 (459)
T ss_pred ccceeEEEEecCCCccHHHHHh-hCCCCccchhhHHHHHHHHHHHHHHHHh-hceeeccCCcceeEEec-CCcEEeeecc
Confidence 7788999999999654444433 3467889999999999999999999999 59999999999999996 8889999999
Q ss_pred ccccccc-----------------------------------C----------------------CCcceeeeeceeeCh
Q 018619 160 SAKQLIA-----------------------------------G----------------------EANISYICSRFYRAP 182 (353)
Q Consensus 160 ~a~~~~~-----------------------------------~----------------------~~~~~~~~t~~y~aP 182 (353)
++..... . ....+.+||-.|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 8643210 0 011245788899999
Q ss_pred hhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCcccccc
Q 018619 183 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVF 262 (353)
Q Consensus 183 E~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
|++.|.. .+.++|+|+||+++|||+.|..||.+.+..+.+..++.. +..+|..
T Consensus 305 EvI~G~G-HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~-----------------~l~Fp~~--------- 357 (459)
T KOG0610|consen 305 EVIRGEG-HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ-----------------PLKFPEE--------- 357 (459)
T ss_pred eeeecCC-CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC-----------------CCcCCCC---------
Confidence 9998765 899999999999999999999999999999988877662 1222221
Q ss_pred CCCCChhHHHHHHHhcCcCCCCCCC----HHHHhcCcccccccCCCCCCCCCCCCCCCC
Q 018619 263 HKRMPPEAIDLASRLLQYSPSLRCT----ALEACAHPFFDELREPNARLPNGRPLPPLF 317 (353)
Q Consensus 263 ~~~~~~~~~~li~~~L~~dp~~R~t----~~~~l~hp~f~~~~~~~~~~~~~~~~~~~~ 317 (353)
..++..++|||+++|.+||++|+. |.||.+||||+.++|..-+....+.+|...
T Consensus 358 -~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~ 415 (459)
T KOG0610|consen 358 -PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPV 415 (459)
T ss_pred -CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCcc
Confidence 147889999999999999999998 999999999999999854443333344433
No 33
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-51 Score=319.15 Aligned_cols=279 Identities=34% Similarity=0.638 Sum_probs=238.3
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.+|.-.+.||+|.||+||++++..+++.||+|.+.-+. ....+|+.+++.++|.|||+++++. ..+..+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkkl 76 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL 76 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCcee
Confidence 35667789999999999999999999999999886432 3446999999999999999999987 555568
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
-+|+|||..+|...+.. -++.++.+.++.++.|++.||.|+|+ +++.|||+||.|+|++. ++.+||+|||+++.+
T Consensus 77 tlvfe~cdqdlkkyfds---lng~~d~~~~rsfmlqllrgl~fchs-hnvlhrdlkpqnllin~-ngelkladfglaraf 151 (292)
T KOG0662|consen 77 TLVFEFCDQDLKKYFDS---LNGDLDPEIVRSFMLQLLRGLGFCHS-HNVLHRDLKPQNLLINR-NGELKLADFGLARAF 151 (292)
T ss_pred EEeHHHhhHHHHHHHHh---cCCcCCHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcceEEecc-CCcEEecccchhhhc
Confidence 89999999988777765 57889999999999999999999999 89999999999999996 899999999999865
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.-.-. .+..+-|.+|++|.++.|..-|+++.|+||.|||+.|+. .|.+.|++.+-.+++.+|...+|.|..+.+..+.
T Consensus 152 gipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred CCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccc
Confidence 44332 234567999999999999999999999999999999998 5889999999999999999999999988776654
Q ss_pred cCCCCCcCCCCC-CCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 243 PNYTDFRFPQIK-AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.--..-.+|... ...|.+..+ +++...+||++++|.-+|.+|++++++++||||...
T Consensus 232 ~lpdyk~yp~ypattswsqivp-~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVP-KLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cCCCCcccCCccccchHHHHhh-hhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 221112233332 356777665 478899999999999999999999999999999864
No 34
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.9e-50 Score=358.11 Aligned_cols=276 Identities=37% Similarity=0.705 Sum_probs=222.2
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
++|.+.+.||+|+||.||+|+++.+++.||+|++.... ....+|+.+++.++||||+++++++ .....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 47999999999999999999999999999999886432 2345799999999999999999988 344468
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
|+||||+.+++...+.. ....+++..++.++.|++.||+|||+ .|++||||||+||+++. ++.+||+|||++...
T Consensus 76 ~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nill~~-~~~~kl~Dfg~~~~~ 150 (287)
T cd07848 76 YLVFEYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK-NDIVHRDIKPENLLISH-NDVLKLCDFGFARNL 150 (287)
T ss_pred EEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcC-CCcEEEeeccCcccc
Confidence 99999999876665543 34679999999999999999999999 79999999999999996 788999999999865
Q ss_pred ccCCC--cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc-
Q 018619 165 IAGEA--NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM- 241 (353)
Q Consensus 165 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (353)
..... .....+|+.|+|||++.+. .++.++|+||+||++|+|++|++||.+.+..+....+.+..+..+...+...
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 151 SEGSNANYTEYVATRWYRSPELLLGA-PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred cccccccccccccccccCCcHHHcCC-CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 43322 2345789999999999664 4899999999999999999999999998888888777777777665544322
Q ss_pred -CcCCCCCcCCCC-CCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 242 -NPNYTDFRFPQI-KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 242 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
++.+.....+.. ....+.......+|.++.+||++||++||++|||++++++||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 122211112211 11222333344578999999999999999999999999999998
No 35
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.1e-53 Score=344.73 Aligned_cols=258 Identities=31% Similarity=0.541 Sum_probs=222.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------------ccchHHHHHHHHHc-CCCceeecceeeeecC
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------------RRYKNRELQLMRVM-DHPNVISLKHCFFSTT 77 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------------~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 77 (353)
..|.-.++||+|..++|-++.++.+|+.+|+|++... .+...+|+.+|+++ .||+|+++.++|
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y---- 92 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY---- 92 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec----
Confidence 4678889999999999999999999999999988421 12234799999998 699999999999
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
+...++++|+|.|+ |.|.+++. ..-.+++...+.++.||+.|++|||. ++|+||||||+|||++. +.++||+
T Consensus 93 -es~sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylHa-~~IVHRDLKpENILldd-n~~i~is 165 (411)
T KOG0599|consen 93 -ESDAFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLHA-RNIVHRDLKPENILLDD-NMNIKIS 165 (411)
T ss_pred -cCcchhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHHH-hhhhhcccChhheeecc-ccceEEe
Confidence 77788999999999 66666654 46789999999999999999999999 89999999999999995 8899999
Q ss_pred eeccccccccCCCcceeeeeceeeChhhhhC-----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Q 018619 157 DFGSAKQLIAGEANISYICSRFYRAPELIFG-----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 231 (353)
Q Consensus 157 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 231 (353)
|||+|..+..++.....+|||.|.|||.+.. .+.|+..+|+|++|||+|.|+.|.+||......-++..|++.
T Consensus 166 DFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG-- 243 (411)
T KOG0599|consen 166 DFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG-- 243 (411)
T ss_pred ccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc--
Confidence 9999999999999899999999999999833 456899999999999999999999999998888888877773
Q ss_pred CCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 232 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
.+.|. ...| .++|.+.+|||++||+.||++|+|+.|+|+||||.++-...
T Consensus 244 ---------------kyqF~---speW-----adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~ 293 (411)
T KOG0599|consen 244 ---------------KYQFR---SPEW-----ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQ 293 (411)
T ss_pred ---------------ccccC---Ccch-----hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhc
Confidence 22221 2233 45899999999999999999999999999999998765443
No 36
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.6e-50 Score=356.80 Aligned_cols=280 Identities=35% Similarity=0.592 Sum_probs=220.8
Q ss_pred ceeeEeeeeecCCCeEEEEEEECC-CCcEEEEEEeeccc------cchHHHHHHHHHc---CCCceeecceeeeecCCCC
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQDR------RYKNRELQLMRVM---DHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~------~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~~~ 80 (353)
.+|++.+.||+|+||.||+|++.. +++.||+|.+.... ....+|+.+++.+ +||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999865 46789999885322 2234677777765 6999999999875444344
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
...+++||||++++|.+.+... ....+++..++.++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~-~~iiH~dlkp~Nil~~~-~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTS-SGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEcC-CCCEEEccccc
Confidence 5568899999999888777542 33568999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 161 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 161 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
+.............+|+.|+|||.+.+. .++.++||||+||++|+|++|.+||.+.+..+.+..+....+.+....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred eEeccCCcccccccccccccChHHHhCC-CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence 9866554444456789999999998654 589999999999999999999999999999999999988877766544322
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.. ......+......+... +...+++.+++||.+||+.||++|||+.++|+||||
T Consensus 236 ~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 236 DV-ALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hh-cccchhccCCCCCCHHH-HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 11 00111111111112222 223578999999999999999999999999999998
No 37
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.8e-50 Score=359.90 Aligned_cols=285 Identities=33% Similarity=0.643 Sum_probs=231.1
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
..++|.+.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++||||+++++++. ....
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 78 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKS 78 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCe
Confidence 3478999999999999999999999999999999886332 23457999999999999999999883 3345
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
.++||||+++++.+.+.. ....+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++..
T Consensus 79 ~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~ 153 (309)
T cd07872 79 LTLVFEYLDKDLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHR-RKVLHRDLKPQNLLINE-RGELKLADFGLARA 153 (309)
T ss_pred EEEEEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEECcccccee
Confidence 889999999987776653 34568999999999999999999999 79999999999999996 78899999999875
Q ss_pred cccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 164 LIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 164 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
...... .....+|+.|+|||.+.+...++.++||||+||++|+|++|++||.+.+..+....+.+..+.+....+....
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 154 KSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred cCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 433222 2335678999999998776668999999999999999999999999999999999999999888877655432
Q ss_pred cC--CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 243 PN--YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 243 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
.. +..+.++......+.... ..+++++++||.+||+.||.+|+|+.|+++||||+.+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~ 296 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHA-PRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRI 296 (309)
T ss_pred chhhhhhhhcCccCCCchhhhc-cCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccccc
Confidence 21 112222322222222222 35789999999999999999999999999999999875443
No 38
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-49 Score=364.56 Aligned_cols=288 Identities=32% Similarity=0.556 Sum_probs=228.8
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC-CCc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 81 (353)
..++|.+.+.||+|+||.||++.+..+++.||||++.... ....+|+.+++.++||||+++++++..... ...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3579999999999999999999999999999999986431 234579999999999999999988744322 223
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+|+||||+++++...+. ..+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKS-DCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCCCHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEECC-CCcEEEEeCCCc
Confidence 4578999999998777664 347889999999999999999999 79999999999999996 788999999999
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
+............+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....++...+.+........
T Consensus 174 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 174 RTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred cccCCCCcccCCcccCCcCCHHHHhCC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 866544444556789999999999664 4899999999999999999999999999999999999988888776544333
Q ss_pred CcC----------CCCCcCCCC---CCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCC
Q 018619 242 NPN----------YTDFRFPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 305 (353)
Q Consensus 242 ~~~----------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~ 305 (353)
.+. +..+.+... ...++........+.++++||.+||+.||.+|||++++|+||||..+..+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~ 329 (364)
T cd07875 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSE 329 (364)
T ss_pred hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCccc
Confidence 221 111111000 0111222222335678999999999999999999999999999987665543
No 39
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.5e-50 Score=367.44 Aligned_cols=285 Identities=32% Similarity=0.568 Sum_probs=225.4
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCC-CCc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 81 (353)
..++|++.+.||+|+||.||++.+..+|+.||+|++... .....+|+.+++.++||||+++++++..... ...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457999999999999999999999999999999998543 2234579999999999999999998754332 122
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+|+||||+++++...+. ..+++..+..++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~-~~ivHrDlkp~NIl~~~-~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKS-DCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCcCHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECC-CCCEEEecCCCc
Confidence 3478999999998766553 348889999999999999999999 79999999999999996 789999999999
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
.............+|+.|+|||++.+. .++.++||||+||++|+|++|+.||.+.+..+....+.+..+.+........
T Consensus 171 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 171 RTACTNFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred cccccCccCCCCcccCCCCCchhccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 865544444556789999999999664 4899999999999999999999999999988888888888888776543221
Q ss_pred C----------cCCCCCcCCCCCCCcc----ccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 242 N----------PNYTDFRFPQIKAHPW----HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 242 ~----------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
. +.+....+... ...| ........++++++||.+||+.||++|||+.|+|+||||..+..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 324 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEEL-FPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDP 324 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhh-ccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCc
Confidence 1 11111111000 0001 011222357889999999999999999999999999999876544
No 40
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-50 Score=363.67 Aligned_cols=257 Identities=32% Similarity=0.551 Sum_probs=220.8
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHHHHHHHHcC-CCceeecceeeeecCCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRVMD-HPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 80 (353)
....|.+.+.||+|.||.||.+.++.||+.||+|.+.+... ...+|+.+|+.+. |||||.+++.| +.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----ED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----Ec
Confidence 45689999999999999999999999999999999976533 5678999999998 99999999999 45
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCC---CcEEEe
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLT---HQVKIC 156 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~---~~vkl~ 156 (353)
...+++|||+|.| .|.+.+... .+++..+..++.|++.|++|||+ .|++||||||+|+|+...+ +.+|++
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~-~gvvHrDlKpEN~L~~~~~~~~~~ik~~ 181 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHS-LGVVHRDLKPENLLLASKDEGSGRIKLI 181 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCHHHeeeccccCCCCcEEEe
Confidence 5569999999994 666666543 39999999999999999999999 7999999999999996532 479999
Q ss_pred eeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 157 DFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 157 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
|||++.....+......+||+.|+|||++.+ ..|+..+||||+||++|.|++|.+||.+.+......++...
T Consensus 182 DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~------- 253 (382)
T KOG0032|consen 182 DFGLAKFIKPGERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG------- 253 (382)
T ss_pred eCCCceEccCCceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC-------
Confidence 9999998877666778899999999999954 45999999999999999999999999999988777766552
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
++. .....| ..++..+++||++||..||.+|+|+.++|+|||++....
T Consensus 254 ----------~~~---f~~~~w-----~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~ 301 (382)
T KOG0032|consen 254 ----------DFD---FTSEPW-----DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGE 301 (382)
T ss_pred ----------CCC---CCCCCc-----cccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcc
Confidence 111 122333 458999999999999999999999999999999987643
No 41
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.4e-49 Score=352.74 Aligned_cols=279 Identities=30% Similarity=0.548 Sum_probs=222.1
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHc---CCCceeecceeeeecCCCCce
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVM---DHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~~~~~ 82 (353)
+|++.+.||+|+||.||+|.++.+++.||+|.+.... ....+|+.+++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5899999999999999999999999999999886421 1234677777665 799999999988655545556
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.++++|||+.+++...+... ....+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~-~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTS-GGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccccCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCCEEECccCccc
Confidence 68899999999887776542 23458999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
............+|..|+|||++.+. .++.++||||+||++|+|++|.+||.+.+..+.+.++....+.+....+....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred cccCcccCCCccccccccCchHhhCC-CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 76544444456789999999999664 48999999999999999999999999998888888888887776654433211
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
......+.......+.. +...++.++.+||.+||++||.+|||+.+++.||||
T Consensus 236 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 -TLPRGAFSPRGPRPVQS-VVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred -cccccccCCCCCCchHH-hCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00011111111111222 223578899999999999999999999999999998
No 42
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8.4e-50 Score=366.54 Aligned_cols=284 Identities=32% Similarity=0.551 Sum_probs=225.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|++.+.||+|+||.||++.+..+++.||||++... .....+|+.+++.++||||+++++++...........|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999999999999988542 12345799999999999999999988544322233688
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+||||+.+++...+. ....+++..++.++.||+.||+|||+ +|++||||||+|||++. ++.+||+|||++....
T Consensus 81 lv~e~~~~~l~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nili~~-~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQSDLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNS-NCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccccCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHHEEECC-CCCEEeccccceeecc
Confidence 999999988776654 35679999999999999999999999 79999999999999996 7899999999997643
Q ss_pred cCC--CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 166 AGE--ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 166 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
... ......+|+.|+|||.+.+...++.++||||+||++|+|++|+.||.+.+..+.+..+.+..+.++...+.....
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 322 223346789999999997766689999999999999999999999999999999999999999888765543211
Q ss_pred CCCCCcCCCCC-CCcc--ccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 244 NYTDFRFPQIK-AHPW--HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 244 ~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
........... ...+ ...+....++++.+||.+||+.||.+|||+.++++||||+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 10000000000 0000 0112345688999999999999999999999999999998743
No 43
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.2e-49 Score=363.49 Aligned_cols=286 Identities=33% Similarity=0.565 Sum_probs=227.6
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC-CCc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 81 (353)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++..... ...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4679999999999999999999999999999999886431 233479999999999999999998754332 222
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+|+||||+++++...+. ..+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDikp~Nill~~-~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKS-DCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcccHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEECC-CCCEEEeeCccc
Confidence 3578999999998776654 348889999999999999999999 79999999999999996 789999999999
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
+............+|+.|+|||++.+. .++.++||||+||++|+|++|+.||.+.+..+....+++.++.+..+.....
T Consensus 167 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 167 RTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred ccCCCccccCCccccCCccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 866554444556789999999999664 4899999999999999999999999999988888888888887766544333
Q ss_pred CcC----------CCCCcCCCCC---CCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 242 NPN----------YTDFRFPQIK---AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 242 ~~~----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
.+. +....++... ..+.........+.++++||.+||+.||++|||+.|+|+||||..+..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~ 320 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP 320 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence 221 1111111110 0111122223456789999999999999999999999999999866443
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.8e-50 Score=357.60 Aligned_cols=250 Identities=27% Similarity=0.420 Sum_probs=209.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|+||.||+|.+..+++.||+|++... .....+|+.+++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 4799999999999999999999999999999988542 22345799999999999999998877 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+.+ +|.+.+. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~NIli~~-~~~~kl~Dfg~~~ 149 (291)
T cd05612 76 LYMLMEYVPGGELFSYLR----NSGRFSNSTGLFYASEIVCALEYLHS-KEIVYRDLKPENILLDK-EGHIKLTDFGFAK 149 (291)
T ss_pred EEEEEeCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECC-CCCEEEEecCcch
Confidence 8999999985 6655554 35679999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
..... .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus 150 ~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------------- 213 (291)
T cd05612 150 KLRDR--TWTLCGTPEYLAPEVIQSK-GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------------- 213 (291)
T ss_pred hccCC--cccccCChhhcCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence 65432 2345689999999998654 4899999999999999999999999988776666555431
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCC
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 303 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~ 303 (353)
. ..++..+++.+++||++||+.||.+|++ ++++++||||+.+.+.
T Consensus 214 ----~------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 214 ----K------------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred ----C------------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 0 0123457889999999999999999995 9999999999887654
No 45
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.5e-50 Score=361.18 Aligned_cols=253 Identities=28% Similarity=0.438 Sum_probs=210.6
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+..++|++.+.||+|+||.||+|++..+++.||+|++.+.. ....+|+.+++.++||||+++++++ ..
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~ 89 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QD 89 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ec
Confidence 45678999999999999999999999999999999986432 2345799999999999999999988 34
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
...+|+||||+.+ +|.+.+. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~-~~~~kl~Dfg 163 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLR----KAGRFPNDVAKFYHAELVLAFEYLHS-KDIIYRDLKPENLLLDN-KGHVKVTDFG 163 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEECC-CCCEEEeecc
Confidence 4458999999985 5555554 35678999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 160 SAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 160 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
++...... .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~---------- 230 (329)
T PTZ00263 164 FAKKVPDR--TFTLCGTPEYLAPEVIQSK-GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG---------- 230 (329)
T ss_pred CceEcCCC--cceecCChhhcCHHHHcCC-CCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC----------
Confidence 99865432 2345789999999999654 4899999999999999999999999887766555444321
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCC
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 303 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~ 303 (353)
.. .++..++.++++||.+||+.||.+|++ ++++++||||++..+.
T Consensus 231 -------~~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 231 -------RL------------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred -------Cc------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 00 122347889999999999999999997 7999999999876443
No 46
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-51 Score=328.54 Aligned_cols=255 Identities=29% Similarity=0.467 Sum_probs=223.0
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
..+.-++|++++.||.|-||.||+|+.+.++-.||+|++.+.. ....+|+++...|+||||++++++|
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f----- 91 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF----- 91 (281)
T ss_pred cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe-----
Confidence 3456689999999999999999999999999999999986643 4456899999999999999999999
Q ss_pred CCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 79 KNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 79 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
.+...+|+++||.. |.++..|.. ....++++..++.++.|++.||.|+|. ++++||||||+|+|++. .+.+||+|
T Consensus 92 hd~~riyLilEya~~gel~k~L~~--~~~~~f~e~~~a~Yi~q~A~Al~y~h~-k~VIhRdiKpenlLlg~-~~~lkiAd 167 (281)
T KOG0580|consen 92 HDSKRIYLILEYAPRGELYKDLQE--GRMKRFDEQRAATYIKQLANALLYCHL-KRVIHRDIKPENLLLGS-AGELKIAD 167 (281)
T ss_pred eccceeEEEEEecCCchHHHHHHh--cccccccccchhHHHHHHHHHHHHhcc-CCcccCCCCHHHhccCC-CCCeeccC
Confidence 55566999999998 677777764 246779999999999999999999999 89999999999999996 88899999
Q ss_pred eccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 158 FGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 158 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
||.+.... .....+.+||..|.+||...+. .++..+|+|++|++.||++.|.+||...+..+.+.+|.+.
T Consensus 168 fGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~-~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~-------- 237 (281)
T KOG0580|consen 168 FGWSVHAP-SNKRKTLCGTLDYLPPEMVEGR-GHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV-------- 237 (281)
T ss_pred CCceeecC-CCCceeeecccccCCHhhcCCC-CccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc--------
Confidence 99998655 4455678999999999999665 4899999999999999999999999999988888777763
Q ss_pred HhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 238 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
++. ++..++.++.|||.+||.++|.+|.+..|++.|||+...
T Consensus 238 ---------~~~------------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 238 ---------DLK------------FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred ---------ccc------------CCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 222 335789999999999999999999999999999999764
No 47
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.2e-51 Score=339.94 Aligned_cols=284 Identities=36% Similarity=0.629 Sum_probs=228.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCc----EEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
..|++.+.||+|.||.||+|..+.++. .||||++.... ...-||+.+++.++|||++++..+|...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---- 99 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc----
Confidence 368999999999999999997665543 68999986542 2335899999999999999999999653
Q ss_pred ceeEEEEeccccchHHHHHHhhhhc-CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC---CCCcEEEe
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSA-NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP---LTHQVKIC 156 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~-~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~---~~~~vkl~ 156 (353)
+..+++++||.+.+|+.++..+... ...++...++.++.||+.|+.|||+ +-|+||||||.||||.. +.|.|||+
T Consensus 100 d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 100 DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-NWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh-hheeeccCCcceEEEeccCCccCeeEee
Confidence 4459999999999999999865543 3568999999999999999999999 89999999999999974 23899999
Q ss_pred eeccccccccCC----CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC---------hHHHH
Q 018619 157 DFGSAKQLIAGE----ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---------AVDQL 223 (353)
Q Consensus 157 Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---------~~~~~ 223 (353)
|||+++.+.+.- .....+-|.||+|||++.|...|+.+.|||+.|||+.||++-++.|.+.. ..+++
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 999999765542 23346779999999999999999999999999999999999999997643 34789
Q ss_pred HHHHHHhCCCCHHHHhhcCcCCCCC--cCCCCCCCcccc-----ccC--CCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 224 VEIIKVLGTPTREEIRCMNPNYTDF--RFPQIKAHPWHK-----VFH--KRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~--~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.+|++.+|.|+...+..+... .++ .+..+....|.. .+. +.-++.+.+|+.+||++||.+|+|++++++|
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~-Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKM-PEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHcCCCccccchhhhhC-cchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 999999999998877654321 111 011111111111 111 2235569999999999999999999999999
Q ss_pred cccccc
Q 018619 295 PFFDEL 300 (353)
Q Consensus 295 p~f~~~ 300 (353)
+||...
T Consensus 338 ~yF~~d 343 (438)
T KOG0666|consen 338 PYFTED 343 (438)
T ss_pred cccccC
Confidence 999874
No 48
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.8e-50 Score=360.66 Aligned_cols=246 Identities=28% Similarity=0.447 Sum_probs=203.2
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.||+|+||.||+|++..+|+.||+|++.+.. ....+|+.+++.++||||+++++++ .....+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 47999999999999999999999999986432 2234789999999999999999887 44446899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC-
Q 018619 90 YVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG- 167 (353)
Q Consensus 90 ~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~- 167 (353)
|+.+ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+||+++. ++.+||+|||+++.....
T Consensus 76 ~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~-~~ivHrDlkp~NIll~~-~~~~kl~DfG~a~~~~~~~ 149 (323)
T cd05571 76 YANGGELFFHLS----RERVFSEDRARFYGAEIVSALGYLHS-CDVVYRDLKLENLMLDK-DGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECC-CCCEEEeeCCCCcccccCC
Confidence 9985 5544443 45679999999999999999999999 79999999999999996 788999999998754322
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
.......||+.|+|||++.+. .++.++||||+||++|+|++|..||...+.......+... .
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~-----------------~ 211 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----------------E 211 (323)
T ss_pred CcccceecCccccChhhhcCC-CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 223456789999999998654 5899999999999999999999999887765554443321 0
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCC
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 303 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~ 303 (353)
. .++..+++++.+||++||+.||++|+ ++.++++||||+.+.+.
T Consensus 212 ~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~ 260 (323)
T cd05571 212 I------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQ 260 (323)
T ss_pred C------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 0 12346899999999999999999999 89999999999987543
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.1e-49 Score=351.03 Aligned_cols=257 Identities=26% Similarity=0.399 Sum_probs=207.7
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.|++.+.||+|+||.||++.+..+++.||+|.+.+.. ....+|+.+++.++|+||+++.+++ .....+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeE
Confidence 4789999999999999999999999999999886432 1234799999999999999998887 334458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++||||+.+ +|...+.. .....+++..+..++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++..
T Consensus 76 ~lv~e~~~~g~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nill~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYN--MGNPGFDEQRAIFYAAELCCGLEDLQR-ERIVYRDLKPENILLDD-RGHIRISDLGLAVQ 151 (285)
T ss_pred EEEEEecCCCcHHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECC-CCCEEEeeCCCcEE
Confidence 899999985 55444432 123468999999999999999999999 79999999999999996 78899999999987
Q ss_pred cccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 164 LIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...........||+.|+|||++.+. .++.++||||+||++|+|++|+.||...+.......+.......
T Consensus 152 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~---------- 220 (285)
T cd05631 152 IPEGETVRGRVGTVGYMAPEVINNE-KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED---------- 220 (285)
T ss_pred cCCCCeecCCCCCCCccCHhhhcCC-CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc----------
Confidence 6544444456789999999999654 58999999999999999999999998766543333322211110
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCC
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 303 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~ 303 (353)
...++..+++++.+||++||+.||.+|+| ++++++||||..+.+.
T Consensus 221 ---------------~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05631 221 ---------------QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFK 270 (285)
T ss_pred ---------------cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHH
Confidence 11133458999999999999999999997 8999999999987654
No 50
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.4e-49 Score=350.25 Aligned_cols=283 Identities=32% Similarity=0.624 Sum_probs=227.8
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
-++|++.+.||+|+||.||++++..+++.||+|.+.... ....+|+.+++.++||||+++++++ .....+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCCeE
Confidence 468999999999999999999999999999999885332 2345799999999999999999998 334458
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++||||++++|...+.. ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||++...
T Consensus 80 ~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~-~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~~~ 154 (301)
T cd07873 80 TLVFEYLDKDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHR-RKVLHRDLKPQNLLINE-RGELKLADFGLARAK 154 (301)
T ss_pred EEEEeccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHHHEEECC-CCcEEECcCcchhcc
Confidence 89999999988777654 34568999999999999999999999 79999999999999996 788999999998754
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..... .....+++.|+|||.+.+...++.++||||+||++|+|++|++||...+..+....+...++.+....+.....
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 155 SIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred CCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc
Confidence 33222 23346788999999987766688999999999999999999999999988888888888888777655443211
Q ss_pred --CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 244 --NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
.+....++....... ......+++++++||.+||+.||.+|||++++++||||+.+...
T Consensus 235 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~ 295 (301)
T cd07873 235 NEEFKSYNYPKYRADCL-HNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER 295 (301)
T ss_pred cccccccccCccccccH-HhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence 111122222111111 11234578999999999999999999999999999999887643
No 51
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.5e-49 Score=358.75 Aligned_cols=285 Identities=36% Similarity=0.630 Sum_probs=227.8
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC-CCce
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNEL 82 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 82 (353)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 578999999999999999999999999999999886432 234479999999999999999988743322 2223
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
..|+++++++++|...+. ...+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++.
T Consensus 94 ~~~~~~~~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~ 166 (343)
T cd07878 94 EVYLVTNLMGADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNE-DCELRILDFGLAR 166 (343)
T ss_pred cEEEEeecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecccCChhhEEECC-CCCEEEcCCccce
Confidence 478999999888766553 3579999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
..... .....+|+.|+|||++.+...++.++||||+||++|+|++|..||.+.+..+.+..+.+..+.+....+....
T Consensus 167 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07878 167 QADDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKIS 244 (343)
T ss_pred ecCCC--cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 65432 3346789999999999775668999999999999999999999999998888888888888877765544322
Q ss_pred cCCCCC---cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 243 PNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 243 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
...... .++......+...+ ...++.+.+||.+||+.||.+|||+.++++||||.....+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~ 308 (343)
T cd07878 245 SEHARKYIQSLPHMPQQDLKKIF-RGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPE 308 (343)
T ss_pred hhhHHHHhhccccccchhHHHhc-cCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCc
Confidence 111000 11111111222222 34678899999999999999999999999999999876554
No 52
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-50 Score=348.98 Aligned_cols=248 Identities=27% Similarity=0.471 Sum_probs=221.4
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
..+|++.+.||.|.||+|.+|.+...|+.||||.+.++. ..+.+|++||..|+||||++++++| ++..
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-----ENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-----ENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh-----cCCc
Confidence 458999999999999999999999999999999887653 2345899999999999999999999 6666
Q ss_pred eEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+.|||||.. |.|++++.. .+.+++.+++++++||..|+.|||. ++++|||||.+|||+|. ++++||+|||++
T Consensus 127 KIvivMEYaS~GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYCHk-nrVvHRDLKLENILLD~-N~NiKIADFGLS 200 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYISE----RGSLSEREARHFFRQIVSAVHYCHK-NRVVHRDLKLENILLDQ-NNNIKIADFGLS 200 (668)
T ss_pred eEEEEEEecCCccHHHHHHH----hccccHHHHHHHHHHHHHHHHHHhh-ccceecccchhheeecC-CCCeeeeccchh
Confidence 6889999998 577777764 5889999999999999999999999 89999999999999996 888999999999
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
..+.......+++|+|.|.+||++.|.++-++.+|.||||++||.|+.|..||.+.+....+.+|-..
T Consensus 201 Nly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G------------ 268 (668)
T KOG0611|consen 201 NLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG------------ 268 (668)
T ss_pred hhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc------------
Confidence 98888888889999999999999999887799999999999999999999999999998888777552
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
.+.- ..-+.++.-||++||-.||++|.|++++-+|=|++
T Consensus 269 -----aYrE-------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 269 -----AYRE-------------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred -----cccC-------------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 2211 12477899999999999999999999999998875
No 53
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-50 Score=354.54 Aligned_cols=257 Identities=27% Similarity=0.429 Sum_probs=230.9
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+-|.+.+.||+|-|.+|.+|+|..||+.||||++.+.. ..+.+|++.|+.++|||||++|++. .....
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi-----DTQTK 91 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI-----DTQTK 91 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-----cccce
Confidence 467999999999999999999999999999999997654 2345899999999999999999998 55666
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+|+|+-+ |+|++++.. ....+.++.++.|++||+.|+.|+|+ -.+|||||||+|+.+-+.-|-|||+|||++.
T Consensus 92 lyLiLELGD~GDl~DyImK---He~Gl~E~La~kYF~QI~~AI~YCHq-LHVVHRDLKPENVVFFEKlGlVKLTDFGFSN 167 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMK---HEEGLNEDLAKKYFAQIVHAISYCHQ-LHVVHRDLKPENVVFFEKLGLVKLTDFGFSN 167 (864)
T ss_pred EEEEEEecCCchHHHHHHh---hhccccHHHHHHHHHHHHHHHHHHhh-hhhhcccCCcceeEEeeecCceEeeeccccc
Confidence 999999988 488887765 45779999999999999999999999 5999999999999987778899999999999
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.+.++....+.+|+..|.|||+++|..+-.+++||||||||||.|++|++||+..++.+.+-+|+.+
T Consensus 168 kf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC------------- 234 (864)
T KOG4717|consen 168 KFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC------------- 234 (864)
T ss_pred cCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc-------------
Confidence 9999999999999999999999999987789999999999999999999999999999999888874
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
.+. ++..+|.+++|||..||..||.+|.|.++|.+|+|++......
T Consensus 235 ----KYt------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 235 ----KYT------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGL 280 (864)
T ss_pred ----ccc------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCc
Confidence 111 3457899999999999999999999999999999999876543
No 54
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-49 Score=363.55 Aligned_cols=278 Identities=23% Similarity=0.347 Sum_probs=213.7
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
+...+|.+.+.||+|+||.||+|.+..+++.||+|... .....+|+.+++.++||||++++++|. .....++|
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~lv 161 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--RGGTATEAHILRAINHPSIIQLKGTFT-----YNKFTCLI 161 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--hhhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeEEE
Confidence 34568999999999999999999999999999999754 234568999999999999999999883 33458899
Q ss_pred eccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 88 MEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 88 ~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
+|++.++|...+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||+|......
T Consensus 162 ~e~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~-~~IvHrDiKP~NIll~~-~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 162 LPRYKTDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHE-NRIIHRDIKAENIFINH-PGDVCLGDFGAACFPVDI 235 (391)
T ss_pred EecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHhEEEcC-CCCEEEEeCCcccccccc
Confidence 99999887766643 4578999999999999999999999 79999999999999996 788999999999753322
Q ss_pred --CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHHhCCCCHHHH
Q 018619 168 --EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE-------NAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 168 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-------~~~~~~~~~~~~~~~~~~~~~ 238 (353)
.......||+.|+|||++.+. .++.++||||+||++|+|++|..||... +....+..++...+.++....
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARD-PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred cccccccccCccCCCChhhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 222345789999999998654 5899999999999999999999877543 234566667776666543211
Q ss_pred hhcCcC----C----CCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 239 RCMNPN----Y----TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 239 ~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
...... + ............|... ..++.++.+||.+||++||.+|||+.|+|+||||+.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNL--YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHH--hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 000000 0 0000000011122221 13677899999999999999999999999999998753
No 55
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5e-49 Score=360.14 Aligned_cols=256 Identities=26% Similarity=0.397 Sum_probs=206.4
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|+||+||+|.+..+++.||+|++.+.. ....+|+.++..++||||+++++.+ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 57999999999999999999999999999999986532 2345799999999999999999888 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+|||||+| +|.+.+. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||+|+
T Consensus 76 ~~lv~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~-~givHrDlKp~NILi~~-~~~vkL~DFGla~ 149 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLM----KKDTLTEEETQFYIAETVLAIDSIHQ-LGFIHRDIKPDNLLLDS-KGHVKLSDFGLCT 149 (363)
T ss_pred EEEEEcCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECC-CCCEEEeeccCcc
Confidence 8999999985 5555554 35689999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCC------------------------------------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHH
Q 018619 163 QLIAGE------------------------------------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAE 206 (353)
Q Consensus 163 ~~~~~~------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~ 206 (353)
...... .....+||+.|+|||++.+. .++.++||||+||++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~~~DvwSlGvil~e 228 (363)
T cd05628 150 GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYE 228 (363)
T ss_pred cccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC-CCCCchhhhhhHHHHHH
Confidence 543211 01235789999999999664 58999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCC--
Q 018619 207 LLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL-- 284 (353)
Q Consensus 207 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~-- 284 (353)
|++|..||.+.+..+....+....... .++. ...+++++++||.+|+. +|.+
T Consensus 229 ll~G~~Pf~~~~~~~~~~~i~~~~~~~---------------~~p~----------~~~~s~~~~~li~~l~~-~~~~r~ 282 (363)
T cd05628 229 MLIGYPPFCSETPQETYKKVMNWKETL---------------IFPP----------EVPISEKAKDLILRFCC-EWEHRI 282 (363)
T ss_pred HHhCCCCCCCCCHHHHHHHHHcCcCcc---------------cCCC----------cCCCCHHHHHHHHHHcC-ChhhcC
Confidence 999999999888777666555421110 0110 01378999999999876 4554
Q ss_pred -CCCHHHHhcCcccccccCCC
Q 018619 285 -RCTALEACAHPFFDELREPN 304 (353)
Q Consensus 285 -R~t~~~~l~hp~f~~~~~~~ 304 (353)
||+++|+++||||+.+.+..
T Consensus 283 ~r~~~~ei~~hp~f~~~~~~~ 303 (363)
T cd05628 283 GAPGVEEIKTNPFFEGVDWEH 303 (363)
T ss_pred CCCCHHHHhCCCCCCCCCHHH
Confidence 57999999999999876543
No 56
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.3e-49 Score=361.76 Aligned_cols=255 Identities=31% Similarity=0.492 Sum_probs=207.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|+||.||+|++..+++.||||++.+.. ....+|+.+++.++||||+++++++ .....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 47999999999999999999999999999999996432 2245799999999999999999988 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+|||||.+ +|.+.+. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~ 149 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLM----KKDTFTEEETRFYIAETILAIDSIHK-LGYIHRDIKPDNLLLDA-KGHIKLSDFGLCT 149 (364)
T ss_pred EEEEECCCCCcHHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECC-CCCEEEeecccce
Confidence 8999999985 5555544 35679999999999999999999999 79999999999999996 8889999999987
Q ss_pred ccccCCC---------------------------------------cceeeeeceeeChhhhhCCCCCCccccchhHHHH
Q 018619 163 QLIAGEA---------------------------------------NISYICSRFYRAPELIFGATEYTTSIDIWSAGCV 203 (353)
Q Consensus 163 ~~~~~~~---------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i 203 (353)
....... ....+||+.|+|||++.+ ..++.++||||+||+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i 228 (364)
T cd05599 150 GLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVI 228 (364)
T ss_pred eccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhH
Confidence 5432110 012468999999999855 458999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCC
Q 018619 204 LAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 283 (353)
Q Consensus 204 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 283 (353)
+|+|++|..||.+.+..+....+.+.... ..++. ...+++++++||++||. ||.
T Consensus 229 l~el~~G~~Pf~~~~~~~~~~~i~~~~~~---------------~~~~~----------~~~~s~~~~~li~~ll~-~p~ 282 (364)
T cd05599 229 MYEMLVGYPPFCSDNPQETYRKIINWKET---------------LQFPD----------EVPLSPEAKDLIKRLCC-EAE 282 (364)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHcCCCc---------------cCCCC----------CCCCCHHHHHHHHHHcc-CHh
Confidence 99999999999988876665554431100 00110 01478999999999997 999
Q ss_pred CCCC---HHHHhcCcccccccCC
Q 018619 284 LRCT---ALEACAHPFFDELREP 303 (353)
Q Consensus 284 ~R~t---~~~~l~hp~f~~~~~~ 303 (353)
+|++ +.++++||||+...+.
T Consensus 283 ~R~~~~~~~~ll~h~~~~~~~~~ 305 (364)
T cd05599 283 RRLGNNGVNEIKSHPFFKGVDWE 305 (364)
T ss_pred hcCCCCCHHHHhcCCCcCCCCHH
Confidence 9998 9999999999987543
No 57
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.2e-49 Score=356.77 Aligned_cols=253 Identities=28% Similarity=0.442 Sum_probs=209.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCC-cEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
+..++|.+.+.||+|+||.||+|.+..++ ..||+|.+.+.. ....+|+.+++.++||||+++++++ .
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~ 101 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----K 101 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----E
Confidence 44578999999999999999999876655 689999886432 2334799999999999999999988 3
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
....+|+||||+.+ +|.+.+. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+||
T Consensus 102 ~~~~~~lv~Ey~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~-~~~ikL~DF 175 (340)
T PTZ00426 102 DESYLYLVLEFVIGGEFFTFLR----RNKRFPNDVGCFYAAQIVLIFEYLQS-LNIVYRDLKPENLLLDK-DGFIKMTDF 175 (340)
T ss_pred eCCEEEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECC-CCCEEEecC
Confidence 34458999999975 5655554 35679999999999999999999999 79999999999999996 889999999
Q ss_pred ccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 159 GSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 159 g~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
|++..... ......||+.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+.......+....
T Consensus 176 G~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~-------- 244 (340)
T PTZ00426 176 GFAKVVDT--RTYTLCGTPEYIAPEILLNV-GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI-------- 244 (340)
T ss_pred CCCeecCC--CcceecCChhhcCHHHHhCC-CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC--------
Confidence 99986533 23456789999999999664 48999999999999999999999999887765555544310
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 303 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~ 303 (353)
. .++..+++++.++|++||+.||.+|+ |++++++||||+++.+.
T Consensus 245 ---------~------------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~ 293 (340)
T PTZ00426 245 ---------I------------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWV 293 (340)
T ss_pred ---------C------------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 0 12345789999999999999999996 89999999999987643
No 58
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.8e-48 Score=343.63 Aligned_cols=275 Identities=35% Similarity=0.588 Sum_probs=218.2
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||+|.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++ .+...++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 5899999999999999999999999999999886431 2345799999999999999999988 3444588
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+++||+++++.+.+.. ....+++..++.++.||+.||.|||+ +|++|+||||+||+++. ++.+||+|||++....
T Consensus 76 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~~~ 150 (284)
T cd07839 76 LVFEYCDQDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHS-HNVLHRDLKPQNLLINK-NGELKLADFGLARAFG 150 (284)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEcC-CCcEEECccchhhccC
Confidence 9999999987776653 34679999999999999999999999 79999999999999996 7889999999998654
Q ss_pred cCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 166 AGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPL-FPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 166 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.... .....+++.|+|||.+.+...++.++||||+||++|+|++|..| |.+.+..+.+..+.+..+.+....+.....
T Consensus 151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 151 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred CCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhh
Confidence 3322 22346688999999987766679999999999999999998877 566666777777777777766554433221
Q ss_pred CCCCCcCCCCCC-CccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKA-HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
......++.... ..|.. ....+++++.+||.+||+.||.+|||+++++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 231 LPDYKPYPMYPATTSLVN-VVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccccccCCCCCcchhhh-hcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 101011111111 12222 234589999999999999999999999999999998
No 59
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-50 Score=332.87 Aligned_cols=263 Identities=29% Similarity=0.467 Sum_probs=214.3
Q ss_pred ecceeeEe-eeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEE
Q 018619 9 QTISYMAE-RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 9 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
..++|.+- ++||-|-.|+|-.+.++.||+.+|+|++. +.....+|+++.... .|||||+++++|.. ...+..++.+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-Ds~KARrEVeLHw~~s~h~~iV~IidVyeN-s~~~rkcLLi 136 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-DSPKARREVELHWMASGHPHIVSIIDVYEN-SYQGRKCLLI 136 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-cCHHHHhHhhhhhhhcCCCceEEeehhhhh-hccCceeeEe
Confidence 46677664 58999999999999999999999999774 445556888876555 69999999998733 3356778889
Q ss_pred Eeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC--CCCcEEEeeeccccc
Q 018619 87 VMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP--LTHQVKICDFGSAKQ 163 (353)
Q Consensus 87 v~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~--~~~~vkl~Dfg~a~~ 163 (353)
|||.+.| .|...++. ..++.++|.++..|+.||+.|+.|||+ .+|.||||||+|+|... .+..+||+|||+|+.
T Consensus 137 VmE~meGGeLfsriq~--~g~~afTErea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 137 VMECMEGGELFSRIQD--RGDQAFTEREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred eeecccchHHHHHHHH--cccccchHHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecCCCCcceEecccccccc
Confidence 9999996 45555543 245679999999999999999999999 69999999999999953 356799999999998
Q ss_pred cccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCCHHHHh
Q 018619 164 LIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD----QLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~ 239 (353)
........+.+.||+|.|||++ |.+.|+..+|+||+||++|-|++|.+||.+..... +-.+|..
T Consensus 214 t~~~~~L~TPc~TPyYvaPevl-g~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~----------- 281 (400)
T KOG0604|consen 214 TQEPGDLMTPCFTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT----------- 281 (400)
T ss_pred cCCCccccCCcccccccCHHHh-CchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc-----------
Confidence 7776777788899999999998 77779999999999999999999999998765421 1111211
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
..+.||. ..| ..+|++++|+|+++|..+|++|+|+.++++|||+.+...
T Consensus 282 ------gqy~FP~---pEW-----s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 282 ------GQYEFPE---PEW-----SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA 330 (400)
T ss_pred ------cCccCCC---hhH-----hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence 2333432 334 348999999999999999999999999999999998643
No 60
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.6e-48 Score=349.25 Aligned_cols=278 Identities=33% Similarity=0.561 Sum_probs=210.4
Q ss_pred eeeeecCCCeEEEEEEEC--CCCcEEEEEEeeccc--cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 16 ERVVGTGSFGIVFQAKCL--ETGETVAIKKVLQDR--RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
.+.||+|+||.||+|+++ .+++.||+|.+.... ....+|+.+++.++||||+++++++... ....+|++|||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEecc
Confidence 468999999999999965 467899999886543 3356899999999999999999887542 234588999999
Q ss_pred cchHHHHHHhhhh-----cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEe---CCCCcEEEeeeccccc
Q 018619 92 PESMYRVLKHYSS-----ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVD---PLTHQVKICDFGSAKQ 163 (353)
Q Consensus 92 ~~~l~~~l~~~~~-----~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~---~~~~~vkl~Dfg~a~~ 163 (353)
++++...+..... ....+++..++.++.||+.||+|||+ +||+||||||+|||++ ..++.+||+|||+|..
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 9988877654221 12358999999999999999999999 7999999999999994 2356899999999986
Q ss_pred cccCC----CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHh
Q 018619 164 LIAGE----ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA---------VDQLVEIIKVL 230 (353)
Q Consensus 164 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---------~~~~~~~~~~~ 230 (353)
..... ......+|+.|+|||++.+...++.++||||+||++|+|++|.+||..... .+.+..+.+.+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 54332 123457799999999997766689999999999999999999999975442 35667777878
Q ss_pred CCCCHHHHhhcCcCCCC------C---cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 231 GTPTREEIRCMNPNYTD------F---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 231 ~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+.+....+......... + .........+........+.++.+||.+||++||.+|+|++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 87776554432211000 0 0000000001111112346789999999999999999999999999998
No 61
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.4e-48 Score=359.42 Aligned_cols=255 Identities=28% Similarity=0.445 Sum_probs=203.0
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.|.+++.||+|+||+||+|++..+++.||+|++.+.. ....+|+.+++.++||||+++++++. ....+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCCEE
Confidence 5899999999999999999999999999999986432 23457999999999999999999883 34458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|+|||||++ +|.+.+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++..
T Consensus 77 ~lv~E~~~gg~L~~~l~----~~~~~~e~~~~~~~~qi~~aL~~LH~-~givHrDlKp~Nili~~-~~~~kL~DFGl~~~ 150 (381)
T cd05626 77 YFVMDYIPGGDMMSLLI----RMEVFPEVLARFYIAELTLAIESVHK-MGFIHRDIKPDNILIDL-DGHIKLTDFGLCTG 150 (381)
T ss_pred EEEEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCcHHHEEECC-CCCEEEeeCcCCcc
Confidence 999999985 5555554 34679999999999999999999999 79999999999999996 78899999999753
Q ss_pred cccCC------------------------------------------------CcceeeeeceeeChhhhhCCCCCCccc
Q 018619 164 LIAGE------------------------------------------------ANISYICSRFYRAPELIFGATEYTTSI 195 (353)
Q Consensus 164 ~~~~~------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~ 195 (353)
..... ...+..||+.|+|||++.+. .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~ 229 (381)
T cd05626 151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK-GYTQLC 229 (381)
T ss_pred cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC-CCCCcc
Confidence 21000 01234689999999998654 589999
Q ss_pred cchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHH
Q 018619 196 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLAS 275 (353)
Q Consensus 196 DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 275 (353)
||||+||++|+|++|..||...+..+....+....... ..+ ....+++++++||.
T Consensus 230 DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------~~~----------~~~~~s~~~~dli~ 284 (381)
T cd05626 230 DWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTL---------------HIP----------PQVKLSPEAVDLIT 284 (381)
T ss_pred ceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccccc---------------CCC----------CCCCCCHHHHHHHH
Confidence 99999999999999999998877665554444311100 001 01247899999999
Q ss_pred HhcCc--CCCCCCCHHHHhcCcccccccCC
Q 018619 276 RLLQY--SPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 276 ~~L~~--dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
+||.. ++..|++++++++||||+.+.+.
T Consensus 285 ~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~ 314 (381)
T cd05626 285 KLCCSAEERLGRNGADDIKAHPFFSEVDFS 314 (381)
T ss_pred HHccCcccccCCCCHHHHhcCcccCCCChh
Confidence 96654 44559999999999999987553
No 62
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=6.7e-49 Score=361.20 Aligned_cols=254 Identities=29% Similarity=0.470 Sum_probs=204.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|+||.||++.+..+++.||||++.+.. ....+|+.+++.++||||++++++| .+...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 47999999999999999999999999999999886432 2345799999999999999999988 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+++ +|.+.+. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||+++
T Consensus 76 ~~lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NIll~~-~~~~kl~DfGla~ 149 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLI----KYDTFSEDVTRFYMAECVLAIEAVHK-LGFIHRDIKPDNILIDR-GGHIKLSDFGLST 149 (377)
T ss_pred eEEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECC-CCCEEEeeccccc
Confidence 8999999974 6655554 35678999999999999999999999 79999999999999996 7889999999986
Q ss_pred ccccCCC------------------------------------------------cceeeeeceeeChhhhhCCCCCCcc
Q 018619 163 QLIAGEA------------------------------------------------NISYICSRFYRAPELIFGATEYTTS 194 (353)
Q Consensus 163 ~~~~~~~------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~ 194 (353)
....... .....||+.|+|||++.+. .++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~ 228 (377)
T cd05629 150 GFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ-GYGQE 228 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC-CCCCc
Confidence 3211000 0124689999999998654 58999
Q ss_pred ccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHH
Q 018619 195 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLA 274 (353)
Q Consensus 195 ~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 274 (353)
+||||+||++|+|++|.+||.+.+..+....+...... ..++. ...++.++.+||
T Consensus 229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------~~~p~----------~~~~s~~~~dli 283 (377)
T cd05629 229 CDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRET---------------LYFPD----------DIHLSVEAEDLI 283 (377)
T ss_pred eeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCc---------------cCCCC----------CCCCCHHHHHHH
Confidence 99999999999999999999888776665555431100 01110 024789999999
Q ss_pred HHhcCcCCCCC---CCHHHHhcCcccccccC
Q 018619 275 SRLLQYSPSLR---CTALEACAHPFFDELRE 302 (353)
Q Consensus 275 ~~~L~~dp~~R---~t~~~~l~hp~f~~~~~ 302 (353)
.+||+ +|.+| +|+.++++||||+...+
T Consensus 284 ~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~ 313 (377)
T cd05629 284 RRLIT-NAENRLGRGGAHEIKSHPFFRGVDW 313 (377)
T ss_pred HHHhc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence 99998 77765 59999999999987654
No 63
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.3e-48 Score=353.61 Aligned_cols=257 Identities=29% Similarity=0.469 Sum_probs=210.4
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|+||.||+|++..+++.||+|++.+.. ....+|+.++..++||||+++++++ .....
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCE
Confidence 47999999999999999999999999999999986432 2345799999999999999999888 44446
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+++ +|.+.+. ..+.+++..++.++.||+.||.|||+ +||+||||||+||+++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~-~~~~kL~Dfg~a~ 149 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLN----NLGVLSEDHARFYMAEMFEAVDALHE-LGYIHRDLKPENFLIDA-SGHIKLTDFGLSK 149 (333)
T ss_pred EEEEEeCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECC-CCCEEEEeCcCCc
Confidence 8999999985 6655554 35678999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.... ......||+.|+|||++.+. .++.++||||+||++|+|++|..||...+..+....+........
T Consensus 150 ~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------- 218 (333)
T cd05600 150 GIVT--YANSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ-------- 218 (333)
T ss_pred cccc--ccCCcccCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc--------
Confidence 6543 23456789999999999665 589999999999999999999999998877766655443211000
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
.+. +.. ....+++++.+||.+||+.+|.+|+|+.++++||||+.+.+
T Consensus 219 -------~~~-----~~~-~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 219 -------RPV-----YDD-PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred -------CCC-----CCc-cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence 000 000 00247899999999999999999999999999999998654
No 64
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-48 Score=360.20 Aligned_cols=254 Identities=28% Similarity=0.449 Sum_probs=204.8
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+|++++.||+|+||.||+|++..+++.||+|++.+.. ....+|+.+++.++||||+++++.+. +...+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCCEE
Confidence 6899999999999999999999999999999986532 23457999999999999999999883 34458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|+|||||++ +|.+.+. ..+.+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||+|..
T Consensus 77 ~lv~E~~~gg~L~~~l~----~~~~~~e~~~~~~~~qi~~al~~lH~-~~ivHrDlKp~NILl~~-~g~~kL~DFGla~~ 150 (382)
T cd05625 77 YFVMDYIPGGDMMSLLI----RMGIFPEDLARFYIAELTCAVESVHK-MGFIHRDIKPDNILIDR-DGHIKLTDFGLCTG 150 (382)
T ss_pred EEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCCEEEeECCCCcc
Confidence 999999985 5655554 34678999999999999999999999 79999999999999996 88899999999753
Q ss_pred cccC------------------------------------------------CCcceeeeeceeeChhhhhCCCCCCccc
Q 018619 164 LIAG------------------------------------------------EANISYICSRFYRAPELIFGATEYTTSI 195 (353)
Q Consensus 164 ~~~~------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 195 (353)
.... ....+..||+.|+|||++.+. .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~ 229 (382)
T cd05625 151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLC 229 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC-CCCCee
Confidence 2100 001124689999999999654 589999
Q ss_pred cchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHH
Q 018619 196 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLAS 275 (353)
Q Consensus 196 DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 275 (353)
||||+||++|+|++|++||.+.+..+....+....... ..+ ....+++++.++|.
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------~~p----------~~~~~s~~~~~li~ 284 (382)
T cd05625 230 DWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSL---------------HIP----------PQAKLSPEASDLII 284 (382)
T ss_pred eEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc---------------CCC----------CcccCCHHHHHHHH
Confidence 99999999999999999999887766655544311110 000 01247999999999
Q ss_pred HhcCcCCCCCCC---HHHHhcCcccccccCC
Q 018619 276 RLLQYSPSLRCT---ALEACAHPFFDELREP 303 (353)
Q Consensus 276 ~~L~~dp~~R~t---~~~~l~hp~f~~~~~~ 303 (353)
+|+ .||.+|++ ++++++||||+.+.+.
T Consensus 285 ~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 285 KLC-RGPEDRLGKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred HHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence 987 59999997 9999999999886543
No 65
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9.5e-49 Score=356.93 Aligned_cols=255 Identities=31% Similarity=0.516 Sum_probs=210.6
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|+||.||+|++..+++.||||++.+.. ....+|+.++..++||||+++++++ .....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 47999999999999999999999999999999986432 2345799999999999999999887 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+.+ +|.+.+.. .+.+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~-~giiH~Dlkp~NIll~~-~~~~kL~Dfg~~~ 149 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHK-LGFIHRDIKPDNILIDA-DGHIKLADFGLCK 149 (350)
T ss_pred EEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECC-CCCEEeecCCCCc
Confidence 8999999975 66666543 3679999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCC------------------------------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCC
Q 018619 163 QLIAGE------------------------------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 212 (353)
Q Consensus 163 ~~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~ 212 (353)
...... ......||+.|+|||++.+. .++.++|||||||++|+|++|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~ 228 (350)
T cd05573 150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFP 228 (350)
T ss_pred cCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCC
Confidence 654433 22345789999999999665 58999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-HHHH
Q 018619 213 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-ALEA 291 (353)
Q Consensus 213 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-~~~~ 291 (353)
||...+.......+...... ..++. ...+++++.+||.+||. ||.+|++ ++++
T Consensus 229 Pf~~~~~~~~~~~i~~~~~~---------------~~~p~----------~~~~~~~~~~li~~ll~-dp~~R~~s~~~l 282 (350)
T cd05573 229 PFYSDTLQETYNKIINWKES---------------LRFPP----------DPPVSPEAIDLICRLLC-DPEDRLGSFEEI 282 (350)
T ss_pred CCCCCCHHHHHHHHhccCCc---------------ccCCC----------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHH
Confidence 99988866665555431110 00110 11268999999999998 9999999 9999
Q ss_pred hcCcccccccCC
Q 018619 292 CAHPFFDELREP 303 (353)
Q Consensus 292 l~hp~f~~~~~~ 303 (353)
++||||+.+.+.
T Consensus 283 l~hp~~~~~~~~ 294 (350)
T cd05573 283 KSHPFFKGIDWE 294 (350)
T ss_pred hcCCCcCCCCHH
Confidence 999999987654
No 66
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-48 Score=349.21 Aligned_cols=242 Identities=31% Similarity=0.521 Sum_probs=199.7
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
||+|+||.||+|++..+++.||+|++.+.. ....+|+.+++.++||||+++++++ ......|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence 699999999999999999999999886431 2234799999999999999998887 3344588999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCC-C
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-A 169 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~-~ 169 (353)
++ +|.+.+. ..+.+++..++.++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||+++...... .
T Consensus 76 ~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~HrDlkp~Nili~~-~~~~kl~Dfg~~~~~~~~~~~ 149 (312)
T cd05585 76 NGGELFHHLQ----REGRFDLSRARFYTAELLCALENLHK-FNVIYRDLKPENILLDY-QGHIALCDFGLCKLNMKDDDK 149 (312)
T ss_pred CCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHeEECC-CCcEEEEECcccccCccCCCc
Confidence 85 5555554 35679999999999999999999999 79999999999999996 7889999999997543322 2
Q ss_pred cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCc
Q 018619 170 NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 249 (353)
Q Consensus 170 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
.....||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+....+...
T Consensus 150 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~-------------------- 208 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGH-GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE-------------------- 208 (312)
T ss_pred cccccCCcccCCHHHHcCC-CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC--------------------
Confidence 3345789999999999664 5899999999999999999999999887766555444321
Q ss_pred CCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC---CHHHHhcCccccccc
Q 018619 250 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC---TALEACAHPFFDELR 301 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~~~l~hp~f~~~~ 301 (353)
...++..+++++.+||.+||+.||.+|+ ++.++++||||++..
T Consensus 209 ---------~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 209 ---------PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred ---------CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 0012345789999999999999999997 589999999999864
No 67
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.6e-48 Score=351.93 Aligned_cols=245 Identities=28% Similarity=0.448 Sum_probs=200.9
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.||+|+||.||++++..+++.||+|++.+.. ....+|+.+++.++||||+++++++ .....+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 47999999999999999999999999986532 2334789999999999999998887 44445899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC-
Q 018619 90 YVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG- 167 (353)
Q Consensus 90 ~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~- 167 (353)
|+++ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 y~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~NIll~~-~~~~kL~DfG~~~~~~~~~ 149 (328)
T cd05593 76 YVNGGELFFHLS----RERVFSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDK-DGHIKITDFGLCKEGITDA 149 (328)
T ss_pred CCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeEECC-CCcEEEecCcCCccCCCcc
Confidence 9985 5544443 35679999999999999999999999 79999999999999996 788999999998754322
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
.......||+.|+|||++.+. .++.++||||+||++|+|++|..||...+..+....+... .
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~-----------------~ 211 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----------------D 211 (328)
T ss_pred cccccccCCcCccChhhhcCC-CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC-----------------C
Confidence 222345689999999998654 5899999999999999999999999887765544433210 0
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccC
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELRE 302 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~ 302 (353)
. .++..+++++.+||++||+.||.+|+ ++.++++||||....+
T Consensus 212 ~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 259 (328)
T cd05593 212 I------------KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNW 259 (328)
T ss_pred c------------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 0 12345899999999999999999997 8999999999987654
No 68
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.9e-48 Score=353.09 Aligned_cols=258 Identities=26% Similarity=0.435 Sum_probs=209.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
...++|++.+.||+|+||.||++++..+++.||+|.+.+. .....+|+.+++.++||||+++++++ ..
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~ 114 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----QD 114 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----Ec
Confidence 4567999999999999999999999999999999988642 22345799999999999999999988 44
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
...+|+|||||++ +|.+.+.. ..+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~-~~IvHrDLKp~NILl~~-~~~~kL~DFG 187 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHS-MGLIHRDVKPDNMLLDK-HGHLKLADFG 187 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECC-CCCEEEEecc
Confidence 4568999999985 66665542 468999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCC--cceeeeeceeeChhhhhCCC---CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 160 SAKQLIAGEA--NISYICSRFYRAPELIFGAT---EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 160 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~---~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
+|........ .....||+.|+|||++.+.. .++.++|+||+||++|+|++|..||.+.+......++.......
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~- 266 (370)
T cd05621 188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL- 266 (370)
T ss_pred cceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc-
Confidence 9986543322 23457899999999986532 37889999999999999999999999888766665554421110
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCC--CCCHHHHhcCcccccccC
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELRE 302 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~--R~t~~~~l~hp~f~~~~~ 302 (353)
.++. ...++..++++|.+||+.++.+ |+|+.++++||||+...+
T Consensus 267 --------------~~p~----------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~ 312 (370)
T cd05621 267 --------------NFPE----------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW 312 (370)
T ss_pred --------------CCCC----------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCCc
Confidence 0110 1246899999999999866654 889999999999987543
No 69
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4.2e-48 Score=354.40 Aligned_cols=259 Identities=25% Similarity=0.431 Sum_probs=211.0
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
.+..++|++.+.||+|+||.||+|++..+++.||+|.+.+.. ....+|+.+++.++||||+++++++ .
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~ 113 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----Q 113 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----e
Confidence 355679999999999999999999999999999999986421 2245799999999999999999887 4
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
....+|+|||||++ +|.+.+.. ..+++..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+||
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~-~~~~kL~Df 186 (370)
T cd05596 114 DDKYLYMVMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDK-SGHLKLADF 186 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEcC-CCCEEEEec
Confidence 44568999999985 56655532 468899999999999999999999 79999999999999996 889999999
Q ss_pred ccccccccCCC--cceeeeeceeeChhhhhCC---CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 018619 159 GSAKQLIAGEA--NISYICSRFYRAPELIFGA---TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 233 (353)
Q Consensus 159 g~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~---~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 233 (353)
|++........ .....||+.|+|||++.+. ..++.++||||+||++|+|++|..||.+.+.......+......
T Consensus 187 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~- 265 (370)
T cd05596 187 GTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS- 265 (370)
T ss_pred cceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc-
Confidence 99986543322 2345789999999998653 24788999999999999999999999988876666555431110
Q ss_pred CHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCC--CCCHHHHhcCcccccccC
Q 018619 234 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELRE 302 (353)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~--R~t~~~~l~hp~f~~~~~ 302 (353)
..++. ...+|.++.+||++||+.+|.+ |+|++++++||||+...+
T Consensus 266 --------------~~~~~----------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~ 312 (370)
T cd05596 266 --------------LTFPD----------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQW 312 (370)
T ss_pred --------------CCCCC----------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence 01110 1247999999999999999998 999999999999987543
No 70
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.6e-49 Score=360.11 Aligned_cols=254 Identities=27% Similarity=0.429 Sum_probs=204.2
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+|++.+.||+|+||.||+|++..+++.||+|++.+. .....+|+.+++.++||||+++++.| .....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 3699999999999999999999999999999988542 23345799999999999999999888 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+|||||++ +|.+.+. ..+.+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||+|.
T Consensus 76 ~~lv~E~~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~-~~~ikL~DFG~a~ 149 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLI----RLGIFEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDR-DGHIKLTDFGLCT 149 (376)
T ss_pred EEEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHEEECC-CCCEEEEeCCCCc
Confidence 8999999985 6666554 34678999999999999999999999 79999999999999996 7889999999975
Q ss_pred ccccC--------------------------------------------CCcceeeeeceeeChhhhhCCCCCCccccch
Q 018619 163 QLIAG--------------------------------------------EANISYICSRFYRAPELIFGATEYTTSIDIW 198 (353)
Q Consensus 163 ~~~~~--------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 198 (353)
..... .......||+.|+|||++.+. .++.++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Diw 228 (376)
T cd05598 150 GFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWW 228 (376)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC-CCCcceeee
Confidence 32100 001134689999999999654 589999999
Q ss_pred hHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhc
Q 018619 199 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLL 278 (353)
Q Consensus 199 SlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 278 (353)
|+||++|+|++|+.||.+.+..+....+...... ...+ ....+++++.++|.+|+
T Consensus 229 SlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---------------~~~~----------~~~~~s~~~~~li~~l~ 283 (376)
T cd05598 229 SVGVILYEMLVGQPPFLADTPAETQLKVINWETT---------------LHIP----------SQAKLSREASDLILRLC 283 (376)
T ss_pred eccceeeehhhCCCCCCCCCHHHHHHHHhccCcc---------------ccCC----------CCCCCCHHHHHHHHHHh
Confidence 9999999999999999988776655444321000 0000 01247899999999987
Q ss_pred CcCCCCCC---CHHHHhcCcccccccC
Q 018619 279 QYSPSLRC---TALEACAHPFFDELRE 302 (353)
Q Consensus 279 ~~dp~~R~---t~~~~l~hp~f~~~~~ 302 (353)
.+|.+|+ |+.++++||||+.+..
T Consensus 284 -~~p~~R~~~~t~~ell~h~~~~~~~~ 309 (376)
T cd05598 284 -CGAEDRLGKNGADEIKAHPFFKGIDF 309 (376)
T ss_pred -cCHhhcCCCCCHHHHhCCCCcCCCCH
Confidence 5999999 9999999999998643
No 71
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2e-48 Score=350.57 Aligned_cols=245 Identities=27% Similarity=0.446 Sum_probs=201.8
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.||+|+||.||++++..+|+.||+|++.+.. ....+|+.+++.++||||++++++| .....+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 47999999999999999999999999986532 2234689999999999999999888 33445899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC-
Q 018619 90 YVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG- 167 (353)
Q Consensus 90 ~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~- 167 (353)
|+++ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 ~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~~~~~~~ 149 (323)
T cd05595 76 YANGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDK-DGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEEcC-CCCEEecccHHhccccCCC
Confidence 9985 5544443 45679999999999999999999999 79999999999999996 788999999998753322
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
.......||+.|+|||.+.+. .++.++||||+||++|+|++|..||...+.......+... .
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~-----------------~ 211 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-----------------E 211 (323)
T ss_pred CccccccCCcCcCCcccccCC-CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----------------C
Confidence 222345689999999998654 5899999999999999999999999887766555444321 0
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccC
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELRE 302 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~ 302 (353)
. .++..+++++.+||.+||+.||.+|+ ++.++++||||.+..+
T Consensus 212 ~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~ 259 (323)
T cd05595 212 I------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 259 (323)
T ss_pred C------------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 0 12345799999999999999999998 8999999999988654
No 72
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.5e-48 Score=362.94 Aligned_cols=280 Identities=25% Similarity=0.381 Sum_probs=212.8
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCC------ceeecceeeeecCCCC
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHP------NVISLKHCFFSTTSKN 80 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~------~iv~~~~~~~~~~~~~ 80 (353)
.++|++.+.||+|+||+||+|.+..+++.||||++.... .....|+.+++.++|. ++++++++|.. .
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~----~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN----E 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc----C
Confidence 578999999999999999999999999999999985432 2335678888777554 57777776632 2
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCC---------
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--------- 151 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~--------- 151 (353)
...+|+|||+++++|.+.+.. .+.+++..++.++.||+.||+|||+..||+||||||+|||++..+.
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CceEEEEEeccCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 235889999999888776653 4679999999999999999999997139999999999999985321
Q ss_pred ------cEEEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 018619 152 ------QVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 225 (353)
Q Consensus 152 ------~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~ 225 (353)
.+||+|||.+.... .......||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~-~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGL-GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred cCCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 59999999886422 223456789999999999765 489999999999999999999999999998888888
Q ss_pred HHHHhCCCCHHHHhhcCcC-CCCC-----c-CCCCC---------CCccccccCCCCChhHHHHHHHhcCcCCCCCCCHH
Q 018619 226 IIKVLGTPTREEIRCMNPN-YTDF-----R-FPQIK---------AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 289 (353)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~-~~~~-----~-~~~~~---------~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~ 289 (353)
+.+.++.++.......... ..++ . .+... ...+... ..++.+.|||.+||++||.+|+|++
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dli~~mL~~dP~~R~ta~ 433 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV---IRDDLLCDLIYGLLHYDRQKRLNAR 433 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh---hchHHHHHHHHHhCCcChhhCCCHH
Confidence 8888887765432211000 0000 0 00000 0001110 1246788999999999999999999
Q ss_pred HHhcCcccccccCC
Q 018619 290 EACAHPFFDELREP 303 (353)
Q Consensus 290 ~~l~hp~f~~~~~~ 303 (353)
|+|+||||.+....
T Consensus 434 e~L~Hp~~~~~~~~ 447 (467)
T PTZ00284 434 QMTTHPYVLKYYPE 447 (467)
T ss_pred HHhcCccccccCCc
Confidence 99999999876443
No 73
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.9e-47 Score=346.46 Aligned_cols=319 Identities=36% Similarity=0.640 Sum_probs=244.0
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.++|.+.+.||+|+||+||++.+..+++.||||.+... .....+|+.+++.++||||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 56899999999999999999999999999999988542 123347999999999999999999875544333345
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+|+++||+.++|.+.+. ..+.+++..+..++.|++.||.|||+ ++++|+||||+||+++. ++.+||+|||++..
T Consensus 84 ~~lv~e~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMDTDLHQIIR----SSQTLSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLNA-NCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCCCCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcC-CCCEEECcCccccc
Confidence 88999999988776664 35679999999999999999999999 79999999999999996 78899999999986
Q ss_pred cccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
..... ......++..|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+.......+....+.+....+....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07858 158 TSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR 237 (337)
T ss_pred cCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence 54432 22345678899999998654558999999999999999999999999988888888888888877765543211
Q ss_pred cC-CCCC--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCCCCCCCCCCCCCCc
Q 018619 243 PN-YTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNF 319 (353)
Q Consensus 243 ~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~~~~~~~~~~~~~~ 319 (353)
.. ...+ ..+......+.. ....+++++.+||++||+.||++|||+.++++||||+.++....... ...+ +.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~--~~~~--~~~ 312 (337)
T cd07858 238 NEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPV--CQTP--FSF 312 (337)
T ss_pred chhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCcc--CCCc--cch
Confidence 11 0000 001111111111 22358999999999999999999999999999999999877654322 1222 244
Q ss_pred hhhhccCCHHHHhhccHHHH
Q 018619 320 KQELSGASPELVNKLIPDHV 339 (353)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~ 339 (353)
.-+..+.+.+.+.+++-.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~ 332 (337)
T cd07858 313 DFEEDALTEEDIKELIYNEM 332 (337)
T ss_pred hhhhhhcCHHHHHHHHHHHH
Confidence 44444466667776665554
No 74
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.6e-48 Score=351.10 Aligned_cols=257 Identities=26% Similarity=0.450 Sum_probs=209.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|+||.||+|++..+|+.||+|++.+.. ....+|+.+++.++||||+++++++ .....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 47999999999999999999999999999999986532 2345789999999999999998887 33445
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||++ ++|.+.+.. ....+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~qi~~aL~~lH~-~~i~H~Dlkp~NIll~~-~~~~kL~Dfg~a~ 150 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNR---YEDQFDEDMAQFYLAELVLAIHSVHQ-MGYVHRDIKPENVLIDR-TGHIKLADFGSAA 150 (330)
T ss_pred EEEEECCCCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEcccCchHheEECC-CCCEEeccCCCCe
Confidence 889999997 466666543 23679999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhC-----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFG-----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
........ ....||+.|+|||++.+ ...++.++||||+||++|+|++|..||...+....+..+......
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~--- 227 (330)
T cd05601 151 RLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF--- 227 (330)
T ss_pred ECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc---
Confidence 66543322 23468999999999853 345788999999999999999999999888777666555432100
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
..++. ...+++++.+||++||+ ||.+|+|++++++||||+.+.+.
T Consensus 228 ------------~~~~~----------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~ 272 (330)
T cd05601 228 ------------LKFPE----------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWN 272 (330)
T ss_pred ------------cCCCC----------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHH
Confidence 00110 12478999999999998 99999999999999999987654
No 75
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.1e-47 Score=346.02 Aligned_cols=287 Identities=36% Similarity=0.686 Sum_probs=227.2
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+++|.+.+.||+|++|.||++.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++..........
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3678999999999999999999999999999999885321 22446999999999999999998775444344456
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
.|+++||+.+++...+. ...+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~-~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~~ 155 (336)
T cd07849 83 VYIVQELMETDLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNT-NCDLKICDFGLARI 155 (336)
T ss_pred EEEEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECC-CCCEEECcccceee
Confidence 88999999998776654 3579999999999999999999999 79999999999999996 78899999999876
Q ss_pred cccCCCc----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 164 LIAGEAN----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 164 ~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
....... ....+|+.|+|||.+.+...++.++||||+||++|+|++|+.||.+.+.......+...++.+..+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 5432221 234678899999998665568999999999999999999999999988888888888877777665544
Q ss_pred hcCcCCCC-C--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 240 CMNPNYTD-F--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 240 ~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
........ + ..+.....+|... ....++++.+||.+||+.||.+|||+.++++||||+.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKL-FPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHH-hcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 32211100 0 0111111222221 12468899999999999999999999999999999988654
No 76
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.8e-48 Score=347.62 Aligned_cols=245 Identities=29% Similarity=0.505 Sum_probs=200.6
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|+++.+++.||+|++.+.. ....+|..++..+ +||||+++++++ .....+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 47999999999999999999999999986432 2234677777766 699999999988 3444589999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+++ +|...+. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 Ey~~~g~L~~~i~----~~~~l~~~~~~~~~~ql~~~L~~lH~-~~ivH~dlkp~NIli~~-~~~~kL~DfG~~~~~~~~ 149 (320)
T cd05590 76 EFVNGGDLMFHIQ----KSRRFDEARARFYAAEITSALMFLHD-KGIIYRDLKLDNVLLDH-EGHCKLADFGMCKEGIFN 149 (320)
T ss_pred cCCCCchHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECC-CCcEEEeeCCCCeecCcC
Confidence 99985 5544443 45679999999999999999999999 79999999999999996 788999999998754322
Q ss_pred -CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 -EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.......||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+.+..+....+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~----------------- 211 (320)
T cd05590 150 GKTTSTFCGTPDYIAPEILQEM-LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND----------------- 211 (320)
T ss_pred CCcccccccCccccCHHHHcCC-CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC-----------------
Confidence 223345789999999998654 5899999999999999999999999988877666554431
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH------HHHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA------LEACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~------~~~l~hp~f~~~~~ 302 (353)
.. .++..++.++.+||++||+.||.+|+++ +++++||||+.+.+
T Consensus 212 ~~------------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 212 EV------------VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred CC------------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 00 1223478999999999999999999998 89999999998754
No 77
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.4e-47 Score=339.27 Aligned_cols=276 Identities=34% Similarity=0.664 Sum_probs=217.6
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|++.+.||+|++|.||+|.+..+++.||+|++.... ....+|+.+++.++|||++++++++. ....+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 5899999999999999999999999999999885321 23467999999999999999999884 334588
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+||||+.+++.+.+... ..+..+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||++....
T Consensus 76 ~v~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~ 152 (285)
T cd07861 76 LIFEFLSMDLKKYLDSL-PKGQYMDAELVKSYLYQILQGILFCHS-RRVLHRDLKPQNLLIDN-KGVIKLADFGLARAFG 152 (285)
T ss_pred EEEecCCCCHHHHHhcC-CCCCcCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEEcC-CCcEEECcccceeecC
Confidence 99999998877776542 234679999999999999999999999 79999999999999996 8889999999987543
Q ss_pred cCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 166 AGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 166 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
.... .....+++.|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+....+.+..+.+....+.....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (285)
T cd07861 153 IPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTS- 231 (285)
T ss_pred CCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchh-
Confidence 3221 22345688999999987666678999999999999999999999999888887777777776665443321110
Q ss_pred CCCC--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 245 YTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 245 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..++ ..+....... ......+++++.++|++||+.||.+|||+.++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 232 LPDYKNTFPKWKKGSL-RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hHHHHhhccccCcchh-HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0000 0111111111 11123579999999999999999999999999999998
No 78
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.9e-48 Score=347.40 Aligned_cols=250 Identities=30% Similarity=0.455 Sum_probs=204.3
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCC-ceeecceeeeecCCCCcee
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHP-NVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~~~~ 83 (353)
+|++.+.||+|+||.||+|++..+++.||+|++.+.. .....|..++..++|+ +|+++++++ .....
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 5899999999999999999999999999999986532 2234688888888765 577887777 33345
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+++ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~-~~~~kL~Dfg~~~ 149 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQ----QVGKFKEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDA-EGHIKIADFGMCK 149 (324)
T ss_pred EEEEEcCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEEcC-CCCEEEeecCcce
Confidence 8899999985 5554443 35678999999999999999999999 79999999999999996 7889999999987
Q ss_pred cccc-CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
.... ........||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+.+..+....+....
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~----------- 217 (324)
T cd05587 150 ENIFGGKTTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN----------- 217 (324)
T ss_pred ecCCCCCceeeecCCccccChhhhcCC-CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 5322 2233445789999999999664 48999999999999999999999999888776665554310
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH-----HHHhcCcccccccC
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELRE 302 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~~~l~hp~f~~~~~ 302 (353)
..++..+++++.++|.+||+.||.+|++. +++++||||+.+.+
T Consensus 218 ------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 218 ------------------VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred ------------------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 11234578999999999999999999976 89999999998755
No 79
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-49 Score=378.07 Aligned_cols=270 Identities=27% Similarity=0.466 Sum_probs=227.8
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+..++|.++++||+|+||.|.+++++.|++.||+|++.+- ...++.|-++|-.-+.+-|+.++-.| ++
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF-----QD 146 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF-----QD 146 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh-----cC
Confidence 5678999999999999999999999999999999999762 34567788898888899999998888 77
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
+.++|+||||++| +|..++..+ .++++..+++|+..|+.||.-+|++ |+|||||||+|||+|. .|.+||+|||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~----~~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~-~GHikLADFG 220 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKF----DRLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDK-SGHIKLADFG 220 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecc-cCcEeeccch
Confidence 8889999999995 677776653 4899999999999999999999995 9999999999999997 8889999999
Q ss_pred cccccccCCC--cceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 018619 160 SAKQLIAGEA--NISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 233 (353)
Q Consensus 160 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 233 (353)
.|-.+..++. ....+|||.|.|||++.. ...|+..+|+||+||++|||+.|..||...+-.+.+.+|++.-
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk--- 297 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK--- 297 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh---
Confidence 9988775543 345789999999999843 2468999999999999999999999999999999998888741
Q ss_pred CHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC---HHHHhcCcccccccCCCCCCCCC
Q 018619 234 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT---ALEACAHPFFDELREPNARLPNG 310 (353)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t---~~~~l~hp~f~~~~~~~~~~~~~ 310 (353)
..+.||.. ..+|+++++||++++. +|++|.. ++++.+||||.++.|.+-+-...
T Consensus 298 ------------~~l~FP~~----------~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~p 354 (1317)
T KOG0612|consen 298 ------------ESLSFPDE----------TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVP 354 (1317)
T ss_pred ------------hhcCCCcc----------cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCC
Confidence 11222210 2489999999999998 8999998 99999999999999865443333
Q ss_pred CCCC
Q 018619 311 RPLP 314 (353)
Q Consensus 311 ~~~~ 314 (353)
+.+|
T Consensus 355 P~vP 358 (1317)
T KOG0612|consen 355 PVVP 358 (1317)
T ss_pred CCCC
Confidence 3333
No 80
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=8.5e-48 Score=346.79 Aligned_cols=248 Identities=29% Similarity=0.487 Sum_probs=202.1
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHH---HHcCCCceeecceeeeecCCCCce
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLM---RVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l---~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
|++.+.||+|+||.||+|.+..+++.||||++.+.. ....+|+.++ +.++||||+++++++ ....
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 788999999999999999999999999999986432 2233455544 456799999999988 3444
Q ss_pred eEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+|+||||+.+ +|...+. .+.+++..++.++.||+.||+|||+ +|++||||||+||+++. ++.+||+|||++
T Consensus 76 ~~~lv~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~-~~ivHrdlkp~Nill~~-~~~~kL~Dfg~~ 148 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHE-NKIVYRDLKLDNLLLDT-EGFVKIADFGLC 148 (324)
T ss_pred EEEEEEcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECC-CCcEEeCcccCC
Confidence 58999999996 4433332 3579999999999999999999999 79999999999999996 788999999998
Q ss_pred cccccC-CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 162 KQLIAG-EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 162 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
...... .......|++.|+|||.+.+. .++.++||||+||++|+|++|..||.+.+..+....+....
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~---------- 217 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE---------- 217 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----------
Confidence 754332 223346789999999998654 58999999999999999999999999888776665544310
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccC
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELRE 302 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~ 302 (353)
..++..++.++.++|.+||+.||.+|| ++.++++||||+.+.+
T Consensus 218 -------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~ 265 (324)
T cd05589 218 -------------------VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW 265 (324)
T ss_pred -------------------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence 012345789999999999999999999 6999999999988654
No 81
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.5e-49 Score=349.53 Aligned_cols=254 Identities=28% Similarity=0.463 Sum_probs=222.4
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.++|..++++|+|+||.+++++++..++.|++|++.-. ++...+|..++++++|||||.+.+.|. .+...
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~----~~~~~ 78 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE----EDGQL 78 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh----cCCce
Confidence 57899999999999999999999999999999998533 334568999999999999999999883 33334
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
++|||+||+| ++.+.+.... +..++++.+..|+.|++.|++|||+ ++|+|||||+.||+++. ++.|||+|||+|+
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~-~~iLHRDlK~~Nifltk-~~~VkLgDfGlaK 154 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHE-NRVLHRDLKCANIFLTK-DKKVKLGDFGLAK 154 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHh-hhhhcccchhhhhhccc-cCceeecchhhhh
Confidence 9999999995 6666666532 5779999999999999999999999 89999999999999997 6668999999999
Q ss_pred ccccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... ...+.+||+.|++||++.+. +|+.++|||||||++|||++-+++|.+.+....+.+|.+....|.
T Consensus 155 ~l~~~~~~a~tvvGTp~YmcPEil~d~-pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl------- 226 (426)
T KOG0589|consen 155 ILNPEDSLASTVVGTPYYMCPEILSDI-PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL------- 226 (426)
T ss_pred hcCCchhhhheecCCCcccCHHHhCCC-CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC-------
Confidence 887776 56778999999999999654 599999999999999999999999999999999998888643332
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
+...+.+++.+|+.||..+|..||++.++|.+|.....
T Consensus 227 ---------------------p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 227 ---------------------PSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred ---------------------CccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 34579999999999999999999999999999998754
No 82
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.9e-48 Score=349.13 Aligned_cols=247 Identities=28% Similarity=0.438 Sum_probs=200.7
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.||+|+||.||++++..+|+.||+|++.+.. ....+|+.+++.++||||+++++++ .....+|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 47999999999999999999999999986532 2234688899999999999998887 34446899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC-
Q 018619 90 YVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG- 167 (353)
Q Consensus 90 ~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~- 167 (353)
|+++ +|...+. ....+++..++.++.||+.||+|||+.+||+||||||+|||++. ++.+||+|||++......
T Consensus 76 ~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~-~~~~kL~Dfg~~~~~~~~~ 150 (325)
T cd05594 76 YANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK-DGHIKITDFGLCKEGIKDG 150 (325)
T ss_pred CCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC-CCCEEEecCCCCeecCCCC
Confidence 9986 4444333 45679999999999999999999996249999999999999996 788999999998754322
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
.......||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+.......+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~-----------------~ 212 (325)
T cd05594 151 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----------------E 212 (325)
T ss_pred cccccccCCcccCCHHHHccC-CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC-----------------C
Confidence 223345689999999998654 5899999999999999999999999887765554433221 0
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCC
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 303 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~ 303 (353)
. .++..+++++.+||++||+.||.+|+ ++.++++||||++..+.
T Consensus 213 ~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 213 I------------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred C------------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 0 12345799999999999999999997 89999999999986543
No 83
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.1e-47 Score=345.74 Aligned_cols=287 Identities=33% Similarity=0.578 Sum_probs=226.0
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC-CC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS-KN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~ 80 (353)
...++|.+.+.||+|+||.||+|.+..+++.||||.+.+.. ....+|+.+++.++||||++++++|..... .+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 34688999999999999999999999999999999885421 233479999999999999999998754332 22
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
...+|+||||+.+++.+.+.. .+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||+
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nil~~~-~~~~kL~Dfg~ 164 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKS-DCTLKILDFGL 164 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECC-CCCEEEccCcc
Confidence 235789999999987776643 28899999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 161 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 161 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
+.............+++.|+|||.+.+. .++.++||||+||++|+|++|+.||...+..+....+.+.++.+.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 165 ARTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred ceeCCCCCCCCCCcccccccCHHHHhCC-CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 9876554444455678899999999664 589999999999999999999999999998888888888888887654433
Q ss_pred cCcCCCCCc--CCCCCCCcccccc------------CCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 241 MNPNYTDFR--FPQIKAHPWHKVF------------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 241 ~~~~~~~~~--~~~~~~~~~~~~~------------~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
.......+. .+.....++...+ ....++.+++||.+||+.||++|||+.|+|.||||+.+-..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~ 320 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDP 320 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCC
Confidence 221111100 0000001111111 22356789999999999999999999999999999876544
No 84
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1e-47 Score=345.77 Aligned_cols=246 Identities=29% Similarity=0.484 Sum_probs=201.4
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|++..+++.||+|++.+.. .....|..++..+ +||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 46999999999999999999999999986532 1234677888765 799999999988 3444589999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+++ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+||+++. ++.+||+|||++......
T Consensus 76 E~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~Nill~~-~~~~kL~Dfg~~~~~~~~ 149 (321)
T cd05591 76 EYVNGGDLMFQIQ----RSRKFDEPRSRFYAAEVTLALMFLHR-HGVIYRDLKLDNILLDA-EGHCKLADFGMCKEGILN 149 (321)
T ss_pred eCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECC-CCCEEEeecccceecccC
Confidence 99985 5544443 35678999999999999999999999 79999999999999996 788999999998754322
Q ss_pred C-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 E-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
. ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...+..+....+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~----------------- 211 (321)
T cd05591 150 GVTTTTFCGTPDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD----------------- 211 (321)
T ss_pred CccccccccCccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 2 2334568999999999865 45899999999999999999999999988877766555431
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-------CHHHHhcCcccccccCC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-------TALEACAHPFFDELREP 303 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-------t~~~~l~hp~f~~~~~~ 303 (353)
.. .++..+++++.++|.+||+.||.+|+ +++++++||||..+.+.
T Consensus 212 ~~------------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~ 263 (321)
T cd05591 212 DV------------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWV 263 (321)
T ss_pred CC------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHH
Confidence 00 12234789999999999999999999 89999999999886543
No 85
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.6e-47 Score=338.10 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=200.9
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
||+|+||+||++.+..+++.||+|++.+.. .....|+.+++.++||||+++.+++ .....+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 699999999999999999999999986432 2234699999999999999998887 3444588999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCC-
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA- 169 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~- 169 (353)
++ +|...+......+..+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++........
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~~~~~~~ 153 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-RRIIYRDLKPENVLLDN-DGNVRISDLGLAVELKDGQSK 153 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEeeCccceecCCCCcc
Confidence 85 5555554433455679999999999999999999999 79999999999999996 78899999999976544332
Q ss_pred cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCc
Q 018619 170 NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 249 (353)
Q Consensus 170 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
.....||+.|+|||.+.+. .++.++|+||+||++|+|++|+.||...+................
T Consensus 154 ~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------- 217 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS--------------- 217 (280)
T ss_pred ccccCCCcCccCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC---------------
Confidence 2345689999999999664 588999999999999999999999987553322222221110000
Q ss_pred CCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCC
Q 018619 250 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 303 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~ 303 (353)
..++..+++++.+++.+||+.||++|+ |++++++||||+.+.+.
T Consensus 218 ----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~ 266 (280)
T cd05608 218 ----------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR 266 (280)
T ss_pred ----------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence 012345799999999999999999999 88999999999986544
No 86
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1e-47 Score=347.55 Aligned_cols=255 Identities=29% Similarity=0.468 Sum_probs=201.6
Q ss_pred eeeEeeeeecCCCeEEEEEEEC---CCCcEEEEEEeeccc--------cchHHHHHHHHHc-CCCceeecceeeeecCCC
Q 018619 12 SYMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR--------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~--------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 79 (353)
+|++.+.||+|+||.||++++. .+++.||+|++.+.. ....+|+.+++.+ +||||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 5899999999999999999864 478999999886431 2234689999999 589999998887 4
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
....+++||||+.+ +|.+.+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+||
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nili~~-~~~~kl~Df 149 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLY----QRDNFSEDEVRFYSGEIILALEHLHK-LGIVYRDIKLENILLDS-EGHVVLTDF 149 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHeEECC-CCCEEEeeC
Confidence 44558899999985 5555553 34679999999999999999999999 79999999999999996 788999999
Q ss_pred ccccccccCCC--cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 159 GSAKQLIAGEA--NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 159 g~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
|++........ .....||+.|+|||++.+...++.++|||||||++|+|++|..||...+.......+......
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~---- 225 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK---- 225 (332)
T ss_pred cCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc----
Confidence 99986533322 234578999999999976556789999999999999999999999754322111111111000
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccC
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELRE 302 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~ 302 (353)
. ...++..+++.+.+||.+||+.||++|+ +++++++||||+...+
T Consensus 226 ----~-----------------~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 275 (332)
T cd05614 226 ----C-----------------DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW 275 (332)
T ss_pred ----C-----------------CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 0 0112345789999999999999999999 8899999999997654
No 87
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3e-47 Score=337.17 Aligned_cols=257 Identities=27% Similarity=0.411 Sum_probs=207.7
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.|++.+.||+|+||.||++.+..+++.||+|++.... ....+|+.+++.++||||+++++++ .....+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence 4899999999999999999999999999999886432 2235799999999999999998887 333458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|+||||+.+ +|...+.. .....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.++|+|||++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYN--MGNPGFDEERAVFYAAEITCGLEDLHR-ERIVYRDLKPENILLDD-YGHIRISDLGLAVE 151 (285)
T ss_pred EEEEeccCCCcHHHHHHh--cCcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHEEECC-CCCEEEeeCCCcee
Confidence 999999985 55544432 233569999999999999999999999 79999999999999996 78899999999987
Q ss_pred cccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 164 LIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...........|++.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+.......+...+....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------- 221 (285)
T cd05605 152 IPEGETIRGRVGTVGYMAPEVVKNE-RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ--------- 221 (285)
T ss_pred cCCCCccccccCCCCccCcHHhcCC-CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc---------
Confidence 6544443455789999999998654 589999999999999999999999987765444333332211100
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCC
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 303 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~ 303 (353)
..++..++..+.+||.+||+.||.+|| +++++++||||....+.
T Consensus 222 ----------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05605 222 ----------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK 270 (285)
T ss_pred ----------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence 112245789999999999999999999 89999999999875443
No 88
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-47 Score=340.99 Aligned_cols=250 Identities=31% Similarity=0.455 Sum_probs=205.7
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcE-EEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGET-VAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~-vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
+.+......+.+.+|+|+||+||.+.. .|.. ||+|++.... ..+.+|+.+|.+++|||||++++++.....
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~ 113 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG 113 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 455566677788899999999999987 4445 9999996532 356789999999999999999999843331
Q ss_pred CCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCC-eeeccCCCCcEEEeCCCC-cEEE
Q 018619 79 KNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPR-VCHRDLKPQNLLVDPLTH-QVKI 155 (353)
Q Consensus 79 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~-i~H~Dlkp~Nill~~~~~-~vkl 155 (353)
.+++||||++ |+|..++... ....++...+..++.||+.||+|||+ ++ ||||||||+|||++. ++ ++||
T Consensus 114 ----~~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~-~~~iIHrDLK~~NiLv~~-~~~~~KI 185 (362)
T KOG0192|consen 114 ----SLCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHS-EGPIIHRDLKSDNILVDL-KGKTLKI 185 (362)
T ss_pred ----ceEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhc-CCCeeecccChhhEEEcC-CCCEEEE
Confidence 4889999999 5666666542 46889999999999999999999999 79 999999999999997 65 9999
Q ss_pred eeeccccccccC-CCcceeeeeceeeChhhhhC-CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 018619 156 CDFGSAKQLIAG-EANISYICSRFYRAPELIFG-ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 233 (353)
Q Consensus 156 ~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 233 (353)
+|||+++..... .......||+.|||||++.+ ...|+.++||||||+++|||+||..||...........+......|
T Consensus 186 ~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp 265 (362)
T KOG0192|consen 186 ADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRP 265 (362)
T ss_pred CCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC
Confidence 999999876554 33344789999999999974 3469999999999999999999999999998866665555432222
Q ss_pred CHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 234 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
. ++...++.+.+|+.+||..||.+||+..+++
T Consensus 266 ~---------------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 266 P---------------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIV 297 (362)
T ss_pred C---------------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence 2 2344789999999999999999999998875
No 89
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.8e-47 Score=344.50 Aligned_cols=251 Identities=29% Similarity=0.422 Sum_probs=204.7
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHHHHHHHHc-CCCceeecceeeeecCCCCcee
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
+|.+.+.||+|+||.||+|++..+++.||+|++.+... ....|..++..+ +|++|+++++++ .....
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 58899999999999999999999999999999875421 223566777666 578899998887 33445
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+++ +|...+. ....+++..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~-~~~~kL~DfG~~~ 149 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQ----QVGRFKEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred EEEEEcCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEecCCCHHHeEECC-CCcEEEccCCCce
Confidence 8899999985 5554443 34679999999999999999999999 79999999999999996 7889999999997
Q ss_pred ccccC-CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAG-EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
..... .......||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~----------- 217 (323)
T cd05616 150 ENMWDGVTTKTFCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN----------- 217 (323)
T ss_pred ecCCCCCccccCCCChhhcCHHHhcCC-CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------
Confidence 54322 223345789999999999654 58999999999999999999999999888776666554410
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH-----HHHhcCcccccccCC
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELREP 303 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~~~l~hp~f~~~~~~ 303 (353)
..++..++.++.+++.+||+.||.+|+++ .++++||||+.+.+.
T Consensus 218 ------------------~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~ 266 (323)
T cd05616 218 ------------------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE 266 (323)
T ss_pred ------------------CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 01234579999999999999999999984 899999999987543
No 90
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.7e-48 Score=351.35 Aligned_cols=255 Identities=27% Similarity=0.417 Sum_probs=206.0
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|+||.||+|.+..+++.||+|++.+.. ....+|+.++..++||+|+++++.+ .....
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 47999999999999999999999999999999986421 2345689999999999999999888 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+|||||+| +|.+.+. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~~L~~lH~-~givHrDLkp~NIli~~-~~~vkL~DfG~~~ 149 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLM----KKDTLSEEATQFYIAETVLAIDAIHQ-LGFIHRDIKPDNLLLDA-KGHVKLSDFGLCT 149 (360)
T ss_pred EEEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECC-CCCEEEeeccCCc
Confidence 8999999985 5555554 35679999999999999999999999 79999999999999996 7899999999987
Q ss_pred ccccCC------------------------------------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHH
Q 018619 163 QLIAGE------------------------------------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAE 206 (353)
Q Consensus 163 ~~~~~~------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~ 206 (353)
...... .....+||+.|+|||++.+. .++.++||||+||++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~~DiwSlGvilye 228 (360)
T cd05627 150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYE 228 (360)
T ss_pred ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC-CCCCcceeccccceeee
Confidence 442210 01134689999999999664 58999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC
Q 018619 207 LLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 286 (353)
Q Consensus 207 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 286 (353)
|++|..||.+.+.......+...... ..++. ...+++++++||.+|+. ||.+|+
T Consensus 229 l~tG~~Pf~~~~~~~~~~~i~~~~~~---------------~~~p~----------~~~~s~~~~~li~~l~~-~p~~R~ 282 (360)
T cd05627 229 MLIGYPPFCSETPQETYRKVMNWKET---------------LVFPP----------EVPISEKAKDLILRFCT-DSENRI 282 (360)
T ss_pred cccCCCCCCCCCHHHHHHHHHcCCCc---------------eecCC----------CCCCCHHHHHHHHHhcc-ChhhcC
Confidence 99999999988877666555431100 00110 01368999999999875 999998
Q ss_pred ---CHHHHhcCcccccccCC
Q 018619 287 ---TALEACAHPFFDELREP 303 (353)
Q Consensus 287 ---t~~~~l~hp~f~~~~~~ 303 (353)
+++++++||||+.+.+.
T Consensus 283 ~~~~~~ei~~hp~f~~~~~~ 302 (360)
T cd05627 283 GSNGVEEIKSHPFFEGVDWG 302 (360)
T ss_pred CCCCHHHHhcCCCCCCCCHH
Confidence 48999999999987654
No 91
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-49 Score=330.12 Aligned_cols=256 Identities=29% Similarity=0.438 Sum_probs=217.9
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchH-------HHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
--++|...++||.|.||+|-+++.+.+++.||||++.++.-..+ .|-++|+.-+||.+..+.-.| +..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-----Qt~ 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-----QTQ 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-----ccC
Confidence 34678889999999999999999999999999999977654333 467889999999999887777 555
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+|+||||.+|+ .+..+......+++..++.+..+|+.||.|||+ ++||+||||.+|+|+|. +|.+||+|||+|
T Consensus 241 drlCFVMeyanGG---eLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs-~~ivYRDlKLENLlLDk-DGHIKitDFGLC 315 (516)
T KOG0690|consen 241 DRLCFVMEYANGG---ELFFHLSRERVFSEDRTRFYGAEIVSALGYLHS-RNIVYRDLKLENLLLDK-DGHIKITDFGLC 315 (516)
T ss_pred ceEEEEEEEccCc---eEeeehhhhhcccchhhhhhhHHHHHHhhhhhh-CCeeeeechhhhheecc-CCceEeeecccc
Confidence 5699999999975 233334456789999999999999999999999 89999999999999997 888999999999
Q ss_pred cccc-cCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 162 KQLI-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 162 ~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
+.-. .+....+.+|||.|+|||++. ...|+.++|+|.+||++|||++|++||...+.......|.-.
T Consensus 316 KE~I~~g~t~kTFCGTPEYLAPEVle-DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e----------- 383 (516)
T KOG0690|consen 316 KEEIKYGDTTKTFCGTPEYLAPEVLE-DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME----------- 383 (516)
T ss_pred hhcccccceeccccCChhhcCchhhc-cccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-----------
Confidence 8643 344556789999999999994 567999999999999999999999999998887776665542
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCCC
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREPN 304 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~~ 304 (353)
+. .|+..++++++.|+..+|.+||.+|.. +.++.+|+||+.+.|..
T Consensus 384 ------d~------------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~ 434 (516)
T KOG0690|consen 384 ------DL------------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEA 434 (516)
T ss_pred ------hc------------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHH
Confidence 22 255689999999999999999999984 78999999999998764
No 92
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9.9e-47 Score=335.54 Aligned_cols=286 Identities=34% Similarity=0.586 Sum_probs=222.9
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcC-CCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMD-HPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.+. ||||+++++++......+...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 57999999999999999999999999999999875432 23457999999995 699999998886554444455
Q ss_pred EEEEeccccchHHHHHHhhhhc-CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSA-NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~-~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.|+||||+++++.+.+...... ...+++..++.++.||+.||.|||+ +|++||||||+||+++..++.+||+|||++.
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK-HGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 8899999999888877653322 4568999999999999999999999 7999999999999999657889999999987
Q ss_pred ccccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... ......+++.|+|||.+.+...++.++|+||+||++|+|++|..||.+.+.......+....+.+....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 553322 2223456888999999876556789999999999999999999999998888888888877776665433211
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
.........+........ .....++.++.+||.+||+.||.+|||+.+++.||||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLS-RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhccchhhcCcccchhHH-HhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 111000111111111111 11234789999999999999999999999999999985
No 93
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-47 Score=349.00 Aligned_cols=280 Identities=25% Similarity=0.412 Sum_probs=207.9
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
....+|++.+.||+|+||.||+|++..+++.||+|+..+. ....|+.+++.++||||+++++++.. ....++|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv 135 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--TTLIEAMLLQNVNHPSVIRMKDTLVS-----GAITCMV 135 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--ccHHHHHHHHhCCCCCCcChhheEEe-----CCeeEEE
Confidence 3456799999999999999999999999999999975432 34579999999999999999998843 3347899
Q ss_pred eccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 88 MEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 88 ~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||++.+++...+.. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 136 ~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 136 LPHYSSDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHA-QRIIHRDVKTENIFIND-VDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred EEccCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEEecCccccccccC
Confidence 99999988777653 45679999999999999999999999 79999999999999996 788999999999754444
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCC-CCCCCCCh---------HHHHHHHHHHhCCCCHHH
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENA---------VDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~-~pf~~~~~---------~~~~~~~~~~~~~~~~~~ 237 (353)
.......||+.|+|||++.+. .++.++||||+||++|+|+++. .+|..... ...+..++...+..+...
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARD-KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEF 289 (357)
T ss_pred cccccccccccccCCeecCCC-CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhc
Confidence 444456789999999998664 4899999999999999999855 44443221 123334444443322111
Q ss_pred HhhcCcCC-CC-CcCCCCCCCcc---ccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 238 IRCMNPNY-TD-FRFPQIKAHPW---HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 238 ~~~~~~~~-~~-~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
........ .. .........++ ...-...++.++.+||.+||+.||.+|||+.|+|+||||+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 290 PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 00000000 00 00000000111 011112568889999999999999999999999999999864
No 94
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=8.6e-47 Score=338.19 Aligned_cols=283 Identities=35% Similarity=0.566 Sum_probs=224.8
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
..++|++.+.||+|+||.||++.+..+|+.||+|.+.... ....+|+.+++.++|+|++++++++.... ..
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH---LD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---CC
Confidence 4578999999999999999999999999999999885332 12347999999999999999999874322 23
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++||||+.++|.+.+... ...+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++.
T Consensus 82 ~~~lv~e~~~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~-~~~~kL~dfg~~~ 156 (309)
T cd07845 82 SIFLVMEYCEQDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHE-NFIIHRDLKVSNLLLTD-KGCLKIADFGLAR 156 (309)
T ss_pred eEEEEEecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCCEEECccceee
Confidence 47899999998887777642 3678999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... ......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||...+..+.+..+.+..+.+....+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 157 TYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred ecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 664432 2223345788999999877666899999999999999999999999999999999989888887765543322
Q ss_pred Cc--CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 242 NP--NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 242 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.. ....+..+......+...+ ...++++.+||++||++||++|||+.++++||||++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~ 296 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKF-PWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK 296 (309)
T ss_pred hcccccccccccCCCCCchHHhc-cccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence 11 1111111111111122111 2368899999999999999999999999999999864
No 95
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.1e-47 Score=343.24 Aligned_cols=245 Identities=29% Similarity=0.495 Sum_probs=200.5
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||+||+|.+..+++.||+|++.+.. ....+|..+++.+ +||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 47999999999999999999999999987532 2234678888877 699999999988 3344589999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+.+ +|...+. ....+++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++......
T Consensus 76 e~~~~~~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~ 149 (318)
T cd05570 76 EYVNGGDLMFHIQ----RSGRFDEPRARFYAAEIVLGLQFLHE-RGIIYRDLKLDNVLLDS-EGHIKIADFGMCKEGILG 149 (318)
T ss_pred cCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEccCCCHHHeEECC-CCcEEecccCCCeecCcC
Confidence 99985 5544443 35679999999999999999999999 79999999999999996 788999999998753222
Q ss_pred -CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 -EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.......||+.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+.......+...
T Consensus 150 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~----------------- 211 (318)
T cd05570 150 GVTTSTFCGTPDYIAPEILSYQ-PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED----------------- 211 (318)
T ss_pred CCcccceecCccccCHHHhcCC-CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 223345689999999999664 4899999999999999999999999887766555444321
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH-----HHHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~~~l~hp~f~~~~~ 302 (353)
. ..++..++.++.+||++||+.||.+|||+ .++++||||+...+
T Consensus 212 ~------------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~ 260 (318)
T cd05570 212 E------------VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDW 260 (318)
T ss_pred C------------CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 0 01234578999999999999999999999 99999999988654
No 96
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.6e-47 Score=347.52 Aligned_cols=257 Identities=26% Similarity=0.435 Sum_probs=207.6
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+..++|++.+.||+|+||.||+|+++.+++.||+|.+.+.. ....+|+.+++.++||||+++++++ ..
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~ 114 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QD 114 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----Ec
Confidence 45689999999999999999999999999999999986421 2345789999999999999999888 44
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
...+|+|||||++ +|...+.. ..+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NIll~~-~~~ikL~DfG 187 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDK-SGHLKLADFG 187 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEECC-CCCEEEEeCC
Confidence 4568999999985 56555532 458999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCC--cceeeeeceeeChhhhhCCC---CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 160 SAKQLIAGEA--NISYICSRFYRAPELIFGAT---EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 160 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~---~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
++........ .....||+.|+|||++.+.. .++.++||||+||++|+|++|..||.+.+.......+......
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-- 265 (371)
T cd05622 188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS-- 265 (371)
T ss_pred ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc--
Confidence 9986543322 23457899999999986532 3788999999999999999999999988876666555432110
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCC--CCCHHHHhcCccccccc
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELR 301 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~--R~t~~~~l~hp~f~~~~ 301 (353)
..++ ....++.++++||.+||..++.+ |++++++++||||++..
T Consensus 266 -------------~~~~----------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 266 -------------LTFP----------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred -------------ccCC----------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence 0011 01257999999999999854443 78999999999998754
No 97
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.4e-47 Score=343.09 Aligned_cols=277 Identities=27% Similarity=0.450 Sum_probs=207.4
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
+..++|++.+.||+|+||.||++.+..++..||+|.+.... ..+.+|+.+++.++||||+++++++.. ..
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 76 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DG 76 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CC
Confidence 34689999999999999999999999999999999886432 345689999999999999999998843 33
Q ss_pred eEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+++||||+++ +|.+.+. ....+++..+..++.|++.||.|||+.++|+||||||+||+++. ++.+||+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~ 151 (331)
T cd06649 77 EISICMEHMDGGSLDQVLK----EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS-RGEIKLCDFGVS 151 (331)
T ss_pred EEEEEeecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC-CCcEEEccCccc
Confidence 48899999995 6655554 34568999999999999999999998336999999999999996 788999999998
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh-
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC- 240 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (353)
...... ......+|+.|+|||++.+. .++.++||||+||++|+|++|+.||...+..+... + ++.+.......
T Consensus 152 ~~~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~-~---~~~~~~~~~~~~ 225 (331)
T cd06649 152 GQLIDS-MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEA-I---FGRPVVDGEEGE 225 (331)
T ss_pred cccccc-ccccCCCCcCcCCHhHhcCC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-H---hcccccccccCC
Confidence 765332 23345789999999999654 48999999999999999999999998776544322 1 22111100000
Q ss_pred ---cCcC-------CCCCcCCCC------------CCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 241 ---MNPN-------YTDFRFPQI------------KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 241 ---~~~~-------~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
..+. ......... ............+++++++||.+||++||++|||+.++++||||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~ 305 (331)
T cd06649 226 PHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK 305 (331)
T ss_pred ccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence 0000 000000000 000000000124688999999999999999999999999999998
Q ss_pred cc
Q 018619 299 EL 300 (353)
Q Consensus 299 ~~ 300 (353)
..
T Consensus 306 ~~ 307 (331)
T cd06649 306 RS 307 (331)
T ss_pred hc
Confidence 64
No 98
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.2e-47 Score=342.76 Aligned_cols=245 Identities=29% Similarity=0.500 Sum_probs=198.1
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHH-cCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRV-MDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|+++.+|+.||+|.+.+.. .....|..++.. ++||||+++++++ .....+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999986532 223456777765 4899999999988 4445689999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc-
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA- 166 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~- 166 (353)
||+.+ +|...+. ....+++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++.....
T Consensus 76 E~~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05620 76 EFLNGGDLMFHIQ----DKGRFDLYRATFYAAEIVCGLQFLHS-KGIIYRDLKLDNVMLDR-DGHIKIADFGMCKENVFG 149 (316)
T ss_pred CCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECC-CCCEEeCccCCCeecccC
Confidence 99985 5554443 35679999999999999999999999 79999999999999996 78899999999875322
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
........||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+....+... .+
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~~------------- 213 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGL-KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--TP------------- 213 (316)
T ss_pred CCceeccCCCcCccCHHHHcCC-CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CC-------------
Confidence 2223446789999999999654 5899999999999999999999999887766554443221 00
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH-HHHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-LEACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-~~~l~hp~f~~~~~ 302 (353)
.++..++.++++||++||+.||++|+++ +++++||||+...+
T Consensus 214 --------------~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~ 256 (316)
T cd05620 214 --------------HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINW 256 (316)
T ss_pred --------------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCH
Confidence 1223478999999999999999999997 58999999988654
No 99
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.4e-47 Score=341.94 Aligned_cols=259 Identities=27% Similarity=0.416 Sum_probs=206.9
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|+||.||++++..+++.||+|++.+. .....+|+.++..++|+||+++++++ .....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 5799999999999999999999999999999998642 12345788999999999999999888 34456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+.+ +|.+.+.. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~ 150 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQ-LGYVHRDIKPDNVLLDK-NGHIRLADFGSCL 150 (331)
T ss_pred EEEEEecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEECCCCHHHEEECC-CCCEEEEECCcee
Confidence 8999999974 66666543 34679999999999999999999999 79999999999999986 7889999999987
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
........ ....||+.|+|||++.+ ...++.++||||+||++|+|++|+.||.+.+..+....+......
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~---- 226 (331)
T cd05597 151 RLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEH---- 226 (331)
T ss_pred ecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCc----
Confidence 65443322 23468999999999863 244788999999999999999999999887766665554431100
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCC--CCCHHHHhcCcccccccCC
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELREP 303 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~--R~t~~~~l~hp~f~~~~~~ 303 (353)
+.++. ....+++++++||++||..++.+ |+++.++++||||....+.
T Consensus 227 -----------~~~~~---------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~ 275 (331)
T cd05597 227 -----------FQFPP---------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDWD 275 (331)
T ss_pred -----------ccCCC---------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCHH
Confidence 00110 01237899999999999765554 7899999999999887554
No 100
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-49 Score=344.70 Aligned_cols=251 Identities=28% Similarity=0.458 Sum_probs=209.7
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
-...|+..+.||+|+||.||+|.+..+++.||||++.-+. ..+++|+.+|..++++||.++|+.|+....
T Consensus 11 ~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~----- 85 (467)
T KOG0201|consen 11 PELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK----- 85 (467)
T ss_pred cccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeeccc-----
Confidence 3557888999999999999999999999999999996443 345689999999999999999999965554
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
++++||||.| ++.+.+. .+..+.+..+..++++++.||.|||+ ++.+|||||+.|||+.. ++.+||+|||.+.
T Consensus 86 LwiiMey~~gGsv~~lL~----~~~~~~E~~i~~ilre~l~~l~ylH~-~~kiHrDIKaanil~s~-~g~vkl~DfgVa~ 159 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLK----SGNILDEFEIAVILREVLKGLDYLHS-EKKIHRDIKAANILLSE-SGDVKLADFGVAG 159 (467)
T ss_pred HHHHHHHhcCcchhhhhc----cCCCCccceeeeehHHHHHHhhhhhh-cceecccccccceeEec-cCcEEEEecceee
Confidence 9999999996 4444443 45666999999999999999999999 79999999999999997 6899999999998
Q ss_pred ccccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
....... ..+.+|||.|||||++.+ ..|+.++||||||++.+||++|.+|+....+...+..|-+
T Consensus 160 ql~~~~~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk------------- 225 (467)
T KOG0201|consen 160 QLTNTVKRRKTFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK------------- 225 (467)
T ss_pred eeechhhccccccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC-------------
Confidence 7655433 367899999999999975 4599999999999999999999999988776433222211
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
...+ .+....|+.+++||..||.+||+.||||.++|+|+|++.
T Consensus 226 -----------~~PP----~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 226 -----------SAPP----RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred -----------CCCC----ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 1111 112357899999999999999999999999999999986
No 101
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9.5e-47 Score=339.12 Aligned_cols=278 Identities=32% Similarity=0.566 Sum_probs=207.3
Q ss_pred eeeeecCCCeEEEEEEECC--CCcEEEEEEeeccc--cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 16 ERVVGTGSFGIVFQAKCLE--TGETVAIKKVLQDR--RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~--~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
...||+|+||.||+|+++. ++..||+|.+.... ....+|+.+++.++||||+++++++... ....+++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEeee
Confidence 3689999999999999654 56889999886543 2456899999999999999999987543 233578999999
Q ss_pred cchHHHHHHhhhh-----cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEe---CCCCcEEEeeeccccc
Q 018619 92 PESMYRVLKHYSS-----ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVD---PLTHQVKICDFGSAKQ 163 (353)
Q Consensus 92 ~~~l~~~l~~~~~-----~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~---~~~~~vkl~Dfg~a~~ 163 (353)
++++...+..... ....+++..++.++.|++.||+|||+ +||+||||||+||++. ..++.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 9988877753221 22458999999999999999999999 7999999999999994 2356899999999986
Q ss_pred cccCCC----cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHHh
Q 018619 164 LIAGEA----NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA---------VDQLVEIIKVL 230 (353)
Q Consensus 164 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---------~~~~~~~~~~~ 230 (353)
...... .....+|+.|+|||.+.+...++.++||||+||++|+|++|.+||..... ...+..+...+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 543321 23457799999999997766689999999999999999999999975432 24455666666
Q ss_pred CCCCHHHHhhcCcC--CCCC-------cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 231 GTPTREEIRCMNPN--YTDF-------RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 231 ~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+.+....+...... +... ..................+..+.+||.+||+.||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 76665444322110 0000 0000000000111112356789999999999999999999999999998
No 102
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.7e-47 Score=343.20 Aligned_cols=246 Identities=25% Similarity=0.471 Sum_probs=196.0
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
++||+|+||.||+|++..+++.||+|++.+.. ....+|..++..+ +||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 47999999999999999999999999997532 2234788888888 799999999988 3444589999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc-c
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI-A 166 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~-~ 166 (353)
|||++ +|...+. ..+.+++..++.++.||+.||+|||+ +||+||||||+||+++. ++.+||+|||+++... .
T Consensus 76 e~~~~g~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~~~~~~ 149 (329)
T cd05588 76 EFVSGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNFLHE-RGIIYRDLKLDNVLLDA-EGHIKLTDYGMCKEGIRP 149 (329)
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECC-CCCEEECcCccccccccC
Confidence 99985 5544443 35689999999999999999999999 79999999999999996 7889999999987532 2
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHHhCCCCHHHH
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA--------VDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~ 238 (353)
........||+.|+|||++.+. .++.++|+||+||++|+|++|..||..... .+...+.+..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--------- 219 (329)
T cd05588 150 GDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE--------- 219 (329)
T ss_pred CCccccccCCccccCHHHHcCC-CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---------
Confidence 2333456789999999999664 589999999999999999999999963221 1111111110
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC------HHHHhcCcccccccC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT------ALEACAHPFFDELRE 302 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t------~~~~l~hp~f~~~~~ 302 (353)
. ...++..++.++.++|++||+.||.+|+| ++++++||||..+.+
T Consensus 220 -------~------------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 220 -------K------------QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred -------C------------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 0 00123457899999999999999999997 789999999987654
No 103
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.4e-47 Score=342.67 Aligned_cols=246 Identities=29% Similarity=0.487 Sum_probs=200.4
Q ss_pred eeeeecCCCeEEEEEEEC---CCCcEEEEEEeeccc--------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 16 ERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR--------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~--------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
++.||+|+||.||+|++. .+++.||+|.+.+.. ....+|+.+++.++||||+++++++. ....+
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-----TGGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-----cCCeE
Confidence 368999999999999864 478899999886431 22347999999999999999998883 34458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|+||||+.+ +|.+.+. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||+++.
T Consensus 76 ~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 149 (323)
T cd05584 76 YLILEYLSGGELFMHLE----REGIFMEDTACFYLSEISLALEHLHQ-QGIIYRDLKPENILLDA-QGHVKLTDFGLCKE 149 (323)
T ss_pred EEEEeCCCCchHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCCEEEeeCcCCee
Confidence 899999986 5555443 45678999999999999999999999 79999999999999996 78999999999875
Q ss_pred cccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
..... ......||+.|+|||.+.+. .++.++||||+||++|+|++|+.||...+.......+...
T Consensus 150 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~------------- 215 (323)
T cd05584 150 SIHEGTVTHTFCGTIEYMAPEILMRS-GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG------------- 215 (323)
T ss_pred cccCCCcccccCCCccccChhhccCC-CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-------------
Confidence 43322 23345689999999998654 4889999999999999999999999988776655544331
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccC
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELRE 302 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~ 302 (353)
.. .++..+++++.+||++||+.||++|+ +++++++||||+...+
T Consensus 216 ----~~------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 216 ----KL------------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred ----CC------------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 00 12345789999999999999999999 8999999999987543
No 104
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.7e-47 Score=344.74 Aligned_cols=245 Identities=29% Similarity=0.479 Sum_probs=198.0
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHHHH-HHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQ-LMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||+||+|.+..+|+.||+|++.+... ....|.. +++.++||||+++++.+ .....+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 479999999999999999999999999864321 1123333 56778999999999888 3344588999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+.+ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~givH~dikp~NIll~~-~~~~kl~Dfg~~~~~~~~ 149 (323)
T cd05575 76 DYVNGGELFFHLQ----RERSFPEPRARFYAAEIASALGYLHS-LNIIYRDLKPENILLDS-QGHVVLTDFGLCKEGIEH 149 (323)
T ss_pred cCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECC-CCcEEEeccCCCcccccC
Confidence 99986 5544443 45679999999999999999999999 79999999999999996 788999999998754322
Q ss_pred -CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 -EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.......||+.|+|||.+.+. .++.++|||||||++|+|++|..||.+.+..+....+... +
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~---~------------- 212 (323)
T cd05575 150 SKTTSTFCGTPEYLAPEVLRKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK---P------------- 212 (323)
T ss_pred CCccccccCChhhcChhhhcCC-CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC---C-------------
Confidence 223345689999999998654 5899999999999999999999999988776655554431 0
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH----HHHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~----~~~l~hp~f~~~~~ 302 (353)
..++..+++++.++|++||+.||.+|+++ .++++||||....+
T Consensus 213 -------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~ 259 (323)
T cd05575 213 -------------LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW 259 (323)
T ss_pred -------------CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 00123578999999999999999999997 69999999987654
No 105
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.5e-47 Score=340.73 Aligned_cols=245 Identities=31% Similarity=0.512 Sum_probs=197.6
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHH-cCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRV-MDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|++..+++.||+|.+.+.. .....|..++.. .+||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 47999999999999999999999999886532 122345566654 4899999999887 3444689999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||++| +|...+. ....+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++......
T Consensus 76 e~~~gg~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dlkp~Nill~~-~~~~kL~Dfg~a~~~~~~ 149 (316)
T cd05592 76 EYLNGGDLMFHIQ----SSGRFDEARARFYAAEIICGLQFLHK-KGIIYRDLKLDNVLLDK-DGHIKIADFGMCKENMNG 149 (316)
T ss_pred cCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHeEECC-CCCEEEccCcCCeECCCC
Confidence 99985 5544443 35679999999999999999999999 79999999999999996 788999999999754332
Q ss_pred C-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 E-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
. ......||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+....+... .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~-------------- 212 (316)
T cd05592 150 EGKASTFCGTPDYIAPEILKGQ-KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--R-------------- 212 (316)
T ss_pred CCccccccCCccccCHHHHcCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--C--------------
Confidence 2 23345789999999999664 4899999999999999999999999988876655544321 0
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH-HHHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-LEACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-~~~l~hp~f~~~~~ 302 (353)
..++..++.++.+||.+||+.||.+|+++ .++++||||+.+.+
T Consensus 213 -------------~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05592 213 -------------PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDW 256 (316)
T ss_pred -------------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCH
Confidence 01224578999999999999999999986 58899999988653
No 106
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.5e-46 Score=332.73 Aligned_cols=276 Identities=42% Similarity=0.752 Sum_probs=225.2
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++. ....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-----HGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCeeE
Confidence 5899999999999999999999999999999986432 23458999999999999999999883 345589
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+||||+.++|.+.+.. ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.++|+|||++....
T Consensus 76 ~v~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~~~~-~~~~~l~dfg~~~~~~ 150 (286)
T cd07832 76 LVMEYMPSDLSEVLRD---EERPLPEAQVKSYMRMLLKGVAYMHA-NGIMHRDLKPANLLISA-DGVLKIADFGLARLFS 150 (286)
T ss_pred EEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCHHHEEEcC-CCcEEEeeeeeccccc
Confidence 9999997788777654 23679999999999999999999999 79999999999999996 7889999999998665
Q ss_pred cCCC--cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC-
Q 018619 166 AGEA--NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN- 242 (353)
Q Consensus 166 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (353)
.... .....++..|+|||.+.+...++.++||||+||++|+|++|.+||.+.+....+..+....+.+....+....
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 151 EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred CCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence 4432 2345678899999998766667899999999999999999999999988888888888888887765443321
Q ss_pred -cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 243 -PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
..+....++......|...+ ...+.++.+||++||+.||++|||++++++||||.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIF-PDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cchhhcccCCCCCcchHHHhC-CCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 11222223333333333322 35678999999999999999999999999999984
No 107
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4e-46 Score=330.07 Aligned_cols=276 Identities=34% Similarity=0.648 Sum_probs=215.3
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
++|++.+.||+|++|.||++.+..+++.||+|++.... ....+|+.+++.++|||++++++++. ....+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCCEE
Confidence 57999999999999999999999999999999885432 23457999999999999999999883 34458
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++||||++++++..+.. ....+++..++.++.|++.||+|||+ .|++|+||||+||+++. ++.+||+|||++...
T Consensus 76 ~~v~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~ 150 (286)
T cd07847 76 HLVFEYCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHK-HNCIHRDVKPENILITK-QGQIKLCDFGFARIL 150 (286)
T ss_pred EEEEeccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCChhhEEEcC-CCcEEECccccceec
Confidence 89999999875554432 44579999999999999999999999 79999999999999996 788999999999876
Q ss_pred ccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.... ......++..|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+....+.+..+............
T Consensus 151 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07847 151 TGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFST 230 (286)
T ss_pred CCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccc
Confidence 5443 223446788899999987656688999999999999999999999998888777777666555443322111110
Q ss_pred C--CCCCcCCCCC-CCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 N--YTDFRFPQIK-AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
. +.....+... ..++.. ....++..+.+||.+||+.||++|||+.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 231 NQFFKGLSIPEPETREPLES-KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccccccccCCCcccccCHHH-HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 0011111110 111111 123578999999999999999999999999999998
No 108
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-48 Score=337.53 Aligned_cols=262 Identities=28% Similarity=0.404 Sum_probs=218.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+..+.|+.-++||+|+||.||-+..+.||+.||+|++.+.+ .....|..+|.+++.++||.+--.| +.
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf-----eT 256 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF-----ET 256 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee-----cC
Confidence 44567899999999999999999999999999999885443 2234689999999999999987777 44
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcC--CCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSAN--QRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~--~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
...+|+|+..|+|+ .|..++... ..+++..++.++.+|+.||++||+ .+||+|||||+|||+|. .|.++|+|+
T Consensus 257 kd~LClVLtlMNGG---DLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~-~~iVYRDLKPeNILLDd-~GhvRISDL 331 (591)
T KOG0986|consen 257 KDALCLVLTLMNGG---DLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR-RRIVYRDLKPENILLDD-HGHVRISDL 331 (591)
T ss_pred CCceEEEEEeecCC---ceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh-cceeeccCChhheeecc-CCCeEeecc
Confidence 44599999999976 344444443 489999999999999999999999 89999999999999996 888999999
Q ss_pred ccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 159 GSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 159 g~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
|+|..+..+....+.+||..|||||++.... |+.+.|+|||||++|+|+.|+.||........-..+-+.....
T Consensus 332 GLAvei~~g~~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~----- 405 (591)
T KOG0986|consen 332 GLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED----- 405 (591)
T ss_pred ceEEecCCCCccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc-----
Confidence 9999999988888889999999999996654 9999999999999999999999998765443332222221111
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCCCC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREPNA 305 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~~~ 305 (353)
...++.++|++++++++.+|++||.+|+. ++++.+||||+.+++...
T Consensus 406 --------------------~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rl 457 (591)
T KOG0986|consen 406 --------------------PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRL 457 (591)
T ss_pred --------------------hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHH
Confidence 12244679999999999999999999984 679999999999988753
No 109
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-48 Score=330.79 Aligned_cols=283 Identities=29% Similarity=0.506 Sum_probs=222.9
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeec---cccchHHHHHHHHHcCC--C----ceeecceeeeecCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ---DRRYKNRELQLMRVMDH--P----NVISLKHCFFSTTS 78 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~E~~~l~~l~h--~----~iv~~~~~~~~~~~ 78 (353)
+..++|.+++.+|+|.||.|-.+.+..++..||||++.. .+....-|+++|.++.+ | -+|.+.++|
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF----- 160 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF----- 160 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-----
Confidence 348899999999999999999999999999999998853 34445568999999832 2 256666666
Q ss_pred CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC---------
Q 018619 79 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL--------- 149 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~--------- 149 (353)
+.....|||+|.++-++++.+.. +.-.+++...++.+++||+.++++||+ .+++|.||||+|||+.+.
T Consensus 161 dyrghiCivfellG~S~~dFlk~--N~y~~fpi~~ir~m~~QL~~sv~fLh~-~kl~HTDLKPENILfvss~~~~~~~~k 237 (415)
T KOG0671|consen 161 DYRGHICIVFELLGLSTFDFLKE--NNYIPFPIDHIRHMGYQLLESVAFLHD-LKLTHTDLKPENILFVSSEYFKTYNPK 237 (415)
T ss_pred hccCceEEEEeccChhHHHHhcc--CCccccchHHHHHHHHHHHHHHHHHHh-cceeecCCChheEEEeccceEEEeccC
Confidence 66667999999999888888865 234679999999999999999999999 799999999999998421
Q ss_pred ----------CCcEEEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCCh
Q 018619 150 ----------THQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 219 (353)
Q Consensus 150 ----------~~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~ 219 (353)
+..|+++|||.|+... +.....+.|..|+|||++++.+ ++.++||||+||||+|+++|...|+..++
T Consensus 238 ~~~~~~r~~ks~~I~vIDFGsAtf~~--e~hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 238 KKVCFIRPLKSTAIKVIDFGSATFDH--EHHSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred CccceeccCCCcceEEEecCCcceec--cCcceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCc
Confidence 2359999999998543 3346778999999999999876 99999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcC------cCCCCCcCCCC---------CCCccccccCC--CCChhHHHHHHHhcCcCC
Q 018619 220 VDQLVEIIKVLGTPTREEIRCMN------PNYTDFRFPQI---------KAHPWHKVFHK--RMPPEAIDLASRLLQYSP 282 (353)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---------~~~~~~~~~~~--~~~~~~~~li~~~L~~dp 282 (353)
.+.+..+...+|+.+...+.... ....+|..... ...+....+.. .--.++.|||++||.+||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 99999999999988877665541 11111111000 01111111111 112368999999999999
Q ss_pred CCCCCHHHHhcCccccccc
Q 018619 283 SLRCTALEACAHPFFDELR 301 (353)
Q Consensus 283 ~~R~t~~~~l~hp~f~~~~ 301 (353)
.+|+|+.|+|+||||+...
T Consensus 395 ~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 395 ARRITLREALSHPFFARLT 413 (415)
T ss_pred cccccHHHHhcCHHhhcCC
Confidence 9999999999999999754
No 110
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.8e-47 Score=339.48 Aligned_cols=246 Identities=30% Similarity=0.523 Sum_probs=198.7
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHH-cCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRV-MDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|.+..+++.||+|.+.+.. .....|..++.. ++||||+++++++. ....+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence 47999999999999999999999999986542 223356777765 58999999998883 334588999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+++ +|...+. ....+++..+..++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 ey~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05619 76 EYLNGGDLMFHIQ----SCHKFDLPRATFYAAEIICGLQFLHS-KGIVYRDLKLDNILLDT-DGHIKIADFGMCKENMLG 149 (316)
T ss_pred eCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECC-CCCEEEccCCcceECCCC
Confidence 99985 6655554 34678999999999999999999999 79999999999999996 788999999998754322
Q ss_pred -CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 -EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.......||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+....+... .+
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~------------- 213 (316)
T cd05619 150 DAKTCTFCGTPDYIAPEILLGQ-KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NP------------- 213 (316)
T ss_pred CCceeeecCCccccCHHHHcCC-CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CC-------------
Confidence 223445789999999998654 5899999999999999999999999888766555443221 00
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHH-HHhcCcccccccCC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL-EACAHPFFDELREP 303 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~-~~l~hp~f~~~~~~ 303 (353)
.++..++.++.+||.+||+.||.+|+++. ++++||||+.+.+.
T Consensus 214 --------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~ 257 (316)
T cd05619 214 --------------CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWS 257 (316)
T ss_pred --------------CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHH
Confidence 01234788999999999999999999996 99999999987543
No 111
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.3e-46 Score=340.09 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=207.4
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|+||.||+++++.+++.||+|.+.+.. ....+|+.++..++|++|+++++++ .....
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 47999999999999999999999999999999986421 2245788899999999999999888 34445
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+. |+|.+.+.. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~lH~-~~iiHrDlkp~Nili~~-~~~~kL~DfG~a~ 150 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDM-NGHIRLADFGSCL 150 (332)
T ss_pred EEEEEeccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECC-CCCEEEeecchhe
Confidence 899999998 566666643 24578999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
........ ....||+.|+|||++.+ ...++.++||||+||++|+|++|+.||...+..+....+.....
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~----- 225 (332)
T cd05623 151 KLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE----- 225 (332)
T ss_pred ecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc-----
Confidence 65433222 23568999999999853 34578999999999999999999999998877666655543110
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCC--CCCHHHHhcCcccccccCC
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELREP 303 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~--R~t~~~~l~hp~f~~~~~~ 303 (353)
...++. ....+++++++||++||..++.+ |++++++++||||..+.+.
T Consensus 226 ----------~~~~p~---------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~ 275 (332)
T cd05623 226 ----------RFQFPA---------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWD 275 (332)
T ss_pred ----------cccCCC---------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCHH
Confidence 001110 11347999999999999776555 6899999999999987654
No 112
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.8e-46 Score=330.41 Aligned_cols=275 Identities=35% Similarity=0.631 Sum_probs=219.0
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-----chHHHHHHHHHcC-CCceeecceeeeecCCCCceeEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRVMD-HPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
|++.+.||+|+||.||++.+..+++.||+|++.+... ...+|+.+++.+. |+|++++++++.+.. ...+++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~---~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK---TGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC---CCcEEE
Confidence 7889999999999999999999999999998865321 1236888888885 999999999885431 134789
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
||||+++++.+.+.. ....+++..++.++.|++.||+|||+ +|++|+||+|+||+++. +.+||+|||++.....
T Consensus 78 v~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~p~ni~l~~--~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 78 VFELMDMNLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHMHR-NGIFHRDIKPENILIKD--DILKLADFGSCRGIYS 151 (282)
T ss_pred EEecCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEcC--CCeEEEeccccccccc
Confidence 999999988777654 23578999999999999999999999 79999999999999995 8899999999987655
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC-C
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN-Y 245 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 245 (353)
........++..|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+.+..+....+.+........... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 152 KPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred CCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 544445567899999998766556789999999999999999999999999988888888888777776443322211 1
Q ss_pred CCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 246 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..+.++....... ..+...++.++.++|.+||++||++|||++++++||||
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 232 MNYNFPSKKGTGL-RKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccCcccccccH-HHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 1122222111111 11223578999999999999999999999999999998
No 113
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.4e-47 Score=344.05 Aligned_cols=245 Identities=30% Similarity=0.492 Sum_probs=197.3
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHH-HHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQ-LMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|++..+|+.||+|++.+.. ....+|.. +++.++||||+++++.+ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 46999999999999999999999999986432 11223433 56778999999998887 3344588999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc-
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA- 166 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~- 166 (353)
||+.+ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~-~givH~Dlkp~NIll~~-~~~~kL~DfG~~~~~~~~ 149 (325)
T cd05604 76 DFVNGGELFFHLQ----RERSFPEPRARFYAAEIASALGYLHS-INIVYRDLKPENILLDS-QGHVVLTDFGLCKEGIAQ 149 (325)
T ss_pred cCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECC-CCCEEEeecCCcccCCCC
Confidence 99986 4444433 45789999999999999999999999 79999999999999996 78899999999875332
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
........||+.|+|||++.+. .++.++||||+||++|+|++|..||...+..+....+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~----------------- 211 (325)
T cd05604 150 SDTTTTFCGTPEYLAPEVIRKQ-PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK----------------- 211 (325)
T ss_pred CCCcccccCChhhCCHHHHcCC-CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 2233456789999999998654 4899999999999999999999999988776665544331
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH----HHHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~----~~~l~hp~f~~~~~ 302 (353)
. ..+....+..+.++|++||+.||.+||++ .+++.||||+...+
T Consensus 212 ~------------~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~ 259 (325)
T cd05604 212 P------------LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSW 259 (325)
T ss_pred C------------ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence 0 00123478899999999999999999976 59999999997654
No 114
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.2e-46 Score=332.97 Aligned_cols=280 Identities=35% Similarity=0.609 Sum_probs=225.5
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.++|++.+.||+|++|.||+|.+..+++.+|+|.+.... ....+|+.+++.++||||+++++++.... ...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCc
Confidence 357999999999999999999999999999999886432 12357999999999999999999875432 245
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
.|+||||++++|.+.+.. ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||++..
T Consensus 81 ~~lv~e~~~~~L~~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~-~~~~~l~d~g~~~~ 155 (293)
T cd07843 81 IYMVMEYVEHDLKSLMET---MKQPFLQSEVKCLMLQLLSGVAHLHD-NWILHRDLKTSNLLLNN-RGILKICDFGLARE 155 (293)
T ss_pred EEEEehhcCcCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECC-CCcEEEeecCceee
Confidence 889999999888777654 23468999999999999999999999 79999999999999996 78899999999986
Q ss_pred cccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
..... ......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||...+..+...++....+.+....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 156 YGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred ccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 65442 22345678889999998766557899999999999999999999999999888888888888877765544321
Q ss_pred c--CCCCCcCCCCCCCccccccCCC-CChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 243 P--NYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 243 ~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
. ..............+...++.. +++.+.++|++||+.||++|||+.|++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 1 1111111222223344445554 68999999999999999999999999999998
No 115
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-46 Score=338.93 Aligned_cols=250 Identities=29% Similarity=0.452 Sum_probs=203.2
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcC-CCceeecceeeeecCCCCcee
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMD-HPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~ 83 (353)
+|...+.||+|+||.||+|.++.+|+.||+|++.+.. .....|..++..+. |++|+++++++ .....
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 4788999999999999999999999999999986532 12346778888776 56777888777 33345
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||+++ +|...+. ..+.+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~Ey~~~g~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivHrDikp~Nill~~-~~~ikL~Dfg~~~ 149 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISVGLFFLHR-RGIIYRDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred EEEEEcCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECC-CCCEEEecccccc
Confidence 8999999985 5544443 45679999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... ......||+.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+.......+....
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~----------- 217 (323)
T cd05615 150 EHMVDGVTTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN----------- 217 (323)
T ss_pred ccCCCCccccCccCCccccCHHHHcCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------
Confidence 543322 22345689999999998654 58999999999999999999999999888766665554410
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccC
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELRE 302 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~ 302 (353)
. .++..++.++.+++.+||+.||.+|++ ..++++||||+.+.+
T Consensus 218 ------~------------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~ 265 (323)
T cd05615 218 ------V------------SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW 265 (323)
T ss_pred ------C------------CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence 0 122457899999999999999999997 478999999998754
No 116
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8e-47 Score=340.93 Aligned_cols=246 Identities=26% Similarity=0.474 Sum_probs=194.3
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|++..+++.||+|++.+.. ....+|+.++..+ +||||+++++++. ....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-----eCCEEEEEE
Confidence 47999999999999999999999999987532 1234677777766 8999999999883 344589999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc-
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA- 166 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~- 166 (353)
||+++ +|...+. ....+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++.....
T Consensus 76 E~~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dikp~Nili~~-~~~~kL~DfG~~~~~~~~ 149 (329)
T cd05618 76 EYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKEGLRP 149 (329)
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECC-CCCEEEeeCCccccccCC
Confidence 99995 4544433 45679999999999999999999999 79999999999999996 78899999999875332
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHHhCCCCHHHH
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA--------VDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~ 238 (353)
........||+.|+|||++.+. .++.++|+||+||++|+|++|..||..... .+.+.+.+..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--------- 219 (329)
T cd05618 150 GDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--------- 219 (329)
T ss_pred CCccccccCCccccCHHHHcCC-CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc---------
Confidence 2223346789999999999664 589999999999999999999999953211 1111111110
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC------HHHHhcCcccccccC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT------ALEACAHPFFDELRE 302 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t------~~~~l~hp~f~~~~~ 302 (353)
. ...++..++.++.+||++||+.||.+|+| .+++++||||+.+.+
T Consensus 220 -------~------------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~ 270 (329)
T cd05618 220 -------K------------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 270 (329)
T ss_pred -------C------------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 0 01133467899999999999999999998 579999999988654
No 117
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.8e-46 Score=354.53 Aligned_cols=263 Identities=24% Similarity=0.357 Sum_probs=215.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC---
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS--- 78 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--- 78 (353)
...++|++.+.||+|+||+||+|++..+|+.||||.+.... ....+|+.++..++|+|++++++.+.....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34689999999999999999999999999999999885432 234578999999999999998877643322
Q ss_pred CCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 79 KNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 79 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
.....+++||||+. |+|.+.+.........+++..++.++.|++.||.|||+ ++|+||||||+|||++. ++.+||+|
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~-~~IiHrDLKP~NILl~~-~~~vkL~D 186 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS-KHMIHRDIKSANILLCS-NGLVKLGD 186 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEeC-CCCEEEEe
Confidence 12235789999998 57877777655566789999999999999999999999 79999999999999996 78899999
Q ss_pred eccccccccC---CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 158 FGSAKQLIAG---EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 158 fg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
||+++..... .......||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+....+.....
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~--- 262 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRK-PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY--- 262 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC---
Confidence 9999765432 122345789999999999664 489999999999999999999999988776655554433100
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
..++..+++++.+++.+||+.||.+|||+.++++|||++...
T Consensus 263 -------------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 263 -------------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 012345789999999999999999999999999999987643
No 118
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.1e-46 Score=338.06 Aligned_cols=288 Identities=35% Similarity=0.671 Sum_probs=229.6
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
+++|.+.+.||+|++|.||++.++.+|+.||+|++.... ....+|+.+++.++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 589999999999999999999999999999999886532 23347999999999999999998774433 33456
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+++||||+.+++...+. ..+.+++..++.++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~-~~~~kl~dfg~~~~ 156 (334)
T cd07855 83 VYVVMDLMESDLHHIIH----SDQPLTEEHIRYFLYQLLRGLKYIHS-ANVIHRDLKPSNLLVNE-DCELRIGDFGMARG 156 (334)
T ss_pred EEEEEehhhhhHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcC-CCcEEeccccccee
Confidence 88999999987666554 35669999999999999999999999 79999999999999996 88999999999876
Q ss_pred cccCCC-----cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 164 LIAGEA-----NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 164 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
...... .....++..|+|||.+.+...++.++|+||+||++|+|++|+.||.+.+....+..+....+.++...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 543221 123467889999999866556899999999999999999999999999888888888888888876654
Q ss_pred hhcCcCCCC---CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCC
Q 018619 239 RCMNPNYTD---FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 305 (353)
Q Consensus 239 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~ 305 (353)
......... -.++.....+|.. +....++++.++|++||+.||.+|||+++++.||||.+...+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSK-IFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHH-HcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence 332211000 0112222223332 22347899999999999999999999999999999998766543
No 119
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-46 Score=349.11 Aligned_cols=278 Identities=24% Similarity=0.348 Sum_probs=208.6
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
......|.+.+.||+|+||.||++.+..+++.||||... .....+|+.+++.++|+||+++++++.. ....++
T Consensus 165 ~~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--~~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~~~l 237 (461)
T PHA03211 165 VVAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--YASSVHEARLLRRLSHPAVLALLDVRVV-----GGLTCL 237 (461)
T ss_pred ccccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--ccCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEEEE
Confidence 345678999999999999999999999999999999643 2345689999999999999999988743 334789
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|||++.++|...+.. ....+++..++.++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||+++....
T Consensus 238 v~e~~~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDLKP~NILl~~-~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 238 VLPKYRSDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHG-EGIIHRDIKTENVLVNG-PEDICLGDFGAACFARG 312 (461)
T ss_pred EEEccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEEECcCCHHHEEECC-CCCEEEcccCCceeccc
Confidence 999999988777653 23579999999999999999999999 79999999999999996 78899999999976543
Q ss_pred CCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHHHhCCCCHH
Q 018619 167 GEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-------AVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 167 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~ 236 (353)
... .....||+.|+|||++.+. .++.++|||||||++|+|++|..|+.... ....+.++++..+.....
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~-~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGD-PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCC-CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 221 2235689999999999665 48999999999999999999875543211 123444444443322111
Q ss_pred H--------HhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 237 E--------IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 237 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
. .............+......|.... .++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYY--KLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhc--cccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 0 0000000000011112223343322 46789999999999999999999999999999964
No 120
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-46 Score=347.85 Aligned_cols=280 Identities=23% Similarity=0.348 Sum_probs=212.7
Q ss_pred eecceeeEeeeeecCCCeEEEEEEEC--CCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCL--ETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+...+|.+.+.||+|+||.||++... .+++.||+|.+... ....+|+.+++.++||||+++++.+ .....+|
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~~ 162 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-KTPGREIDILKTISHRAIINLIHAY-----RWKSTVC 162 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-ccHHHHHHHHHhcCCCCccceeeeE-----eeCCEEE
Confidence 34568999999999999999999754 35678999988654 3456899999999999999999888 3344588
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
++||++.+++...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||++....
T Consensus 163 lv~e~~~~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~-~givHrDlkp~Nill~~-~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 163 MVMPKYKCDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHG-RGIIHRDVKTENIFLDE-PENAVLGDFGAACKLD 236 (392)
T ss_pred EEehhcCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcC-CCCEEEccCccccccC
Confidence 999999998877663 35679999999999999999999999 79999999999999996 7889999999997654
Q ss_pred cCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCCHHHHh
Q 018619 166 AGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---AVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 166 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~ 239 (353)
.... .....||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+ ....+..+.+.++..+.....
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALD-PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred cccccccccccccccCccCHhHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 3322 2345789999999998654 48999999999999999999999997654 345566666665544322111
Q ss_pred hcCcC----CCCCcCCCCCCCcccccc-CCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 240 CMNPN----YTDFRFPQIKAHPWHKVF-HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 240 ~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
..... +..+.........+...+ ...++.++.+||.+||+.||.+|||+.++|+||||.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 00000 000000000000011111 12467889999999999999999999999999999763
No 121
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.5e-47 Score=341.99 Aligned_cols=245 Identities=28% Similarity=0.472 Sum_probs=201.2
Q ss_pred eeeecCCCeEEEEEEEC---CCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 17 RVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
+.||+|+||.||++++. .+|+.||+|++.+.. ....+|+.+++.++||||+++++++ .....+|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence 67999999999999863 578999999986532 2334799999999999999999888 334458899
Q ss_pred eccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 88 MEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 88 ~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|||+.+ +|.+.+. ....+++..++.++.||+.||+|||+ +||+||||||+||+++. ++.+||+|||++.....
T Consensus 77 ~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~~~~ 150 (318)
T cd05582 77 LDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDE-EGHIKLTDFGLSKESID 150 (318)
T ss_pred EcCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHeEECC-CCcEEEeeccCCcccCC
Confidence 999984 6555553 35679999999999999999999999 79999999999999996 78899999999886544
Q ss_pred C-CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCC
Q 018619 167 G-EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 245 (353)
Q Consensus 167 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
. .......||+.|+|||.+.+. .++.++||||+||++|+|++|+.||...+..+....+.+.
T Consensus 151 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~---------------- 213 (318)
T cd05582 151 HEKKAYSFCGTVEYMAPEVVNRR-GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA---------------- 213 (318)
T ss_pred CCCceecccCChhhcCHHHHcCC-CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC----------------
Confidence 3 223345789999999998654 4789999999999999999999999988776665554331
Q ss_pred CCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccC
Q 018619 246 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELRE 302 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~ 302 (353)
.. .++..+++++.+||++||+.||.+||| +.+++.||||+.+.+
T Consensus 214 -~~------------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 214 -KL------------GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred -CC------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 00 122357899999999999999999999 778999999987643
No 122
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.9e-46 Score=329.49 Aligned_cols=277 Identities=35% Similarity=0.666 Sum_probs=216.7
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.++|++.+.||+|++|.||++.+..+++.||||.+.... ....+|+.+++.++||||+++++++ ......
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeE
Confidence 478999999999999999999999899999999885432 2345799999999999999999988 344468
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
|+||||+.++|.+.+.. ....+++..++.++.|++.||.|||+ ++|+|+||||+||+++. ++.+||+|||++...
T Consensus 79 ~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~~ 153 (291)
T cd07844 79 TLVFEYLDTDLKQYMDD---CGGGLSMHNVRLFLFQLLRGLAYCHQ-RRVLHRDLKPQNLLISE-RGELKLADFGLARAK 153 (291)
T ss_pred EEEEecCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCHHHEEEcC-CCCEEECcccccccc
Confidence 89999999988776653 23478999999999999999999999 79999999999999996 788999999998754
Q ss_pred ccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.... ......++..|+|||.+.+...++.++||||+||++|+|++|..||.... ..+.+..+.+..+.+....+....
T Consensus 154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 154 SVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred CCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence 3221 11223467889999998765668899999999999999999999997766 566677777777777665543322
Q ss_pred cC--CCCCcCCCCCCCccccccCCCCC--hhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 243 PN--YTDFRFPQIKAHPWHKVFHKRMP--PEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 243 ~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.. +.....+..........+ ..++ .++.++|.+||+.||.+|||+.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hccccccccccccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 11 111111111111111111 1244 889999999999999999999999999998
No 123
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-47 Score=308.71 Aligned_cols=261 Identities=26% Similarity=0.374 Sum_probs=208.4
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc----ccchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
.++..+|++.+.||+|||+.||++++..+++.||+|++... .+...+|++..++++|||++++++........+..
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 47889999999999999999999999999999999998543 34456899999999999999999887766666777
Q ss_pred eEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCC--eeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~--i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
..|++++|.. |++.+.+......+..+++.++..|+.++++||++||+ .. ++||||||.|||+.. ++.++|.|||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~-~~~~vl~D~G 174 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSD-SGLPVLMDLG 174 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecC-CCceEEEecc
Confidence 8999999998 78999998887778899999999999999999999999 68 999999999999996 7889999999
Q ss_pred cccccccCCC----------cceeeeeceeeChhhhhCC--CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 018619 160 SAKQLIAGEA----------NISYICSRFYRAPELIFGA--TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 227 (353)
Q Consensus 160 ~a~~~~~~~~----------~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~ 227 (353)
.+....-.-. -....+|..|+|||++.-. ...+.++|||||||+||.|+.|..||... .
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~ 245 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------Y 245 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------h
Confidence 9875421111 1123578999999998432 23588999999999999999999999421 1
Q ss_pred HHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 228 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+.-+.-.. .+ ....+.+|. ...+|+.+.+||++||+.||.+||++.+++.+
T Consensus 246 ~~GgSlaL-Av-----~n~q~s~P~----------~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 246 QQGGSLAL-AV-----QNAQISIPN----------SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred hcCCeEEE-ee-----eccccccCC----------CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 10000000 00 000111111 12489999999999999999999999999854
No 124
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.7e-47 Score=342.33 Aligned_cols=244 Identities=27% Similarity=0.494 Sum_probs=195.8
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHHHHHHHHc---CCCceeecceeeeecCCCCceeEEEEe
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRVM---DHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
||+|+||+||+|++..+++.||+|++.+... ....|..++... +||||+++++++ .....+|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 6999999999999999999999999864321 112355565554 699999999888 4444589999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+.+ +|...+. ..+.+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qil~al~~LH~-~~ivHrDlkp~Nili~~-~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 76 DYMSGGELFWHLQ----KEGRFSEDRAKFYIAELVLALEHLHK-YDIVYRDLKPENILLDA-TGHIALCDFGLSKANLTD 149 (330)
T ss_pred cCCCCChHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECC-CCCEEEecCCcCcCCCCC
Confidence 99985 5554443 45779999999999999999999999 79999999999999996 788999999998754332
Q ss_pred -CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 -EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.......||+.|+|||++.+...++.++||||+||++|+|++|..||.+.+..+....+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~----------------- 212 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG----------------- 212 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 22335678999999999876656899999999999999999999999887766555443321
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC----CHHHHhcCccccccc
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC----TALEACAHPFFDELR 301 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~----t~~~~l~hp~f~~~~ 301 (353)
...++ ...+++++.+||++||+.||.+|+ ++.++++||||....
T Consensus 213 ~~~~~-----------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 213 KVRFP-----------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred CCCCC-----------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 01111 023688999999999999999998 789999999998754
No 125
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.9e-46 Score=337.65 Aligned_cols=259 Identities=25% Similarity=0.393 Sum_probs=206.8
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|+||.||++++..+++.||+|.+.+.. ....+|..++..++|++|+++++++ .....
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 57999999999999999999999999999999886421 2244688899999999999999888 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.|+||||+.| +|...+.. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~---~~~~l~~~~~~~~~~qi~~~L~~lH~-~~iiHrDlkp~Nill~~-~~~~kl~DfG~a~ 150 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYIAEMVLAIHSIHQ-LHYVHRDIKPDNVLLDM-NGHIRLADFGSCL 150 (331)
T ss_pred EEEEEeCCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCchHHEEEcC-CCCEEEEecccee
Confidence 8999999985 66666543 24678999999999999999999999 79999999999999996 7889999999997
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhCC----CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFGA----TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~~----~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
........ ....||+.|+|||++.+. ..++.++|+||+||++|+|++|+.||...+..+....+......
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~---- 226 (331)
T cd05624 151 KMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER---- 226 (331)
T ss_pred eccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCc----
Confidence 65443322 234689999999998542 34788999999999999999999999888776655554431100
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCC--CCCHHHHhcCcccccccCC
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELREP 303 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~--R~t~~~~l~hp~f~~~~~~ 303 (353)
..++. ....++++++++|.+||..++.+ |++++++++||||+.+.+.
T Consensus 227 -----------~~~p~---------~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~ 275 (331)
T cd05624 227 -----------FQFPS---------HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWE 275 (331)
T ss_pred -----------ccCCC---------ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHH
Confidence 00110 01247899999999999976655 4689999999999987654
No 126
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=9.1e-46 Score=329.22 Aligned_cols=281 Identities=36% Similarity=0.648 Sum_probs=220.2
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
++|++.+.||+|++|.||++.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++. .....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence 57999999999999999999999999999999885431 23457999999999999999999883 34458
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
|+||||+++++.+.+... ....+++..++.++.||+.||+|||+ ++++|+||+|+||+++..++.+||+|||++...
T Consensus 77 ~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 77 YLVFEYLDLDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred EEEEecccccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 999999998877766432 23346888999999999999999999 799999999999999865678999999999754
Q ss_pred ccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.... ......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||...+..+...++....+.+....+.....
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 154 GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred CCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 3322 223346788999999987655688999999999999999999999999888888888887777766544321100
Q ss_pred CCCCC--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 244 NYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
..++ ..+..... ........+++++.++|.+||+.||++||++.+++.||||..+.
T Consensus 234 -~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 234 -LPDYKSAFPKWPPK-DLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred -chhhhhhcccCCCC-CHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 0000 00000000 00111235788999999999999999999999999999999864
No 127
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.1e-45 Score=329.28 Aligned_cols=279 Identities=36% Similarity=0.645 Sum_probs=219.8
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc---------chHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---------YKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
+|.+.+.||+|++|.||+|.+..+++.||+|.+..... ....|+.+++.++|+||+++++++. ...
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-----HKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-----cCC
Confidence 58899999999999999999999999999999865432 2346899999999999999999883 344
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
..++||||+.++|.+.+.. ....+++..++.++.||+.||.|||+ +|++|+||||+||+++. ++.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~L~~~i~~---~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nill~~-~~~~~l~dfg~~~ 150 (298)
T cd07841 76 NINLVFEFMETDLEKVIKD---KSIVLTPADIKSYMLMTLRGLEYLHS-NWILHRDLKPNNLLIAS-DGVLKLADFGLAR 150 (298)
T ss_pred EEEEEEcccCCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCChhhEEEcC-CCCEEEccceeee
Confidence 5889999997777776653 12379999999999999999999999 79999999999999996 8889999999998
Q ss_pred ccccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
....... .....+++.|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+.+.++....+.+....+...
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 151 SFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGV 230 (298)
T ss_pred eccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhc
Confidence 6654322 223456788999999866666889999999999999999999999988888888777777766665443321
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
...............+... .....+.++.+||.+||++||++|||+.+++.||||++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQ-IFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred ccccccccccccCCcchhh-hcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 1110000111111111111 2234688999999999999999999999999999999853
No 128
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=6.9e-48 Score=308.58 Aligned_cols=284 Identities=31% Similarity=0.589 Sum_probs=239.1
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-ccchHHHHHHHHHcC-CCceeecceeeeecCCCCceeEEE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRVMD-HPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
..++|++.+.+|+|-|+.||.+.+..+++.++||+++.- .+.+.+|+.+|+.|. ||||+++.++.-+..+.. ..+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt---paL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT---PSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC---chh
Confidence 568999999999999999999999999999999988543 456779999999996 999999999986655543 668
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|+||++..-...+- ..++...++.++.||+.||.|||+ .||+|||+||.|+++|.....++|+|+|+|.....
T Consensus 113 iFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 99999975333332 458888999999999999999999 69999999999999998778899999999999888
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCCHHHHh-----h
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF-PGENAVDQLVEIIKVLGTPTREEIR-----C 240 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 240 (353)
+......+.+..|..||++...+.|..+-|+|||||++..|+..+.|| .+.++.+++.+|.+.+|+......- .
T Consensus 186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~ 265 (338)
T KOG0668|consen 186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID 265 (338)
T ss_pred CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence 888778889999999999988888999999999999999999988665 7889999999999999987664332 1
Q ss_pred cCcCCCCCcCCCCCCCccccccCC----CCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHK----RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
+++.+.+. +......+|...+.. -+++++.||+.++|.+|..+|+||.|++.||||..+...
T Consensus 266 Ldp~~~~i-~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 266 LDPQFEDI-LGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA 331 (338)
T ss_pred CChhHhhH-hhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence 23333321 233455677766554 257999999999999999999999999999999887654
No 129
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.4e-46 Score=330.31 Aligned_cols=275 Identities=36% Similarity=0.687 Sum_probs=218.0
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|++.+.||.|++|.||+|++..+++.||||.+..+. ....+|+.+++.++||||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 5899999999999999999999999999999885432 2356799999999999999999987 3344588
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+||||+.+++...+.. .....+++..++.++.|++.||+|||+ ++++|+||+|+||+++. ++.+||+|||++....
T Consensus 76 ~v~e~~~~~l~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~i~H~~l~p~nill~~-~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 76 LVFEFLHQDLKKFMDA--SPLSGIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFG 151 (284)
T ss_pred EEeeccccCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEEeeccchhhcc
Confidence 9999999887766653 234678999999999999999999999 79999999999999996 7889999999987554
Q ss_pred cCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC--
Q 018619 166 AGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN-- 242 (353)
Q Consensus 166 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (353)
.... .....+++.|+|||.+.+...++.++|+||+||++|+|++|..||.+.+..+...++.+..+.+....+....
T Consensus 152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 152 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred cCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence 3322 2234567889999988766657889999999999999999999999998888888888888777654322110
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+.+. ..++......... ....++++++++|.+||+.||.+|||+.+++.||||
T Consensus 232 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 232 PDYK-PSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHH-hhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0000 0111111111111 123478899999999999999999999999999998
No 130
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-48 Score=316.91 Aligned_cols=287 Identities=29% Similarity=0.523 Sum_probs=232.0
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC---
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS--- 78 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--- 78 (353)
.....|.-...+|+|.||.||+|+++.+|+.||+|++.-+. ....+|+++|..++|+|++.+++++-...+
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 45678888999999999999999999999999998774321 233589999999999999999887744332
Q ss_pred CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 79 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
.....+|+||.+|..+|..++.. ...+++..++..++.+++.||.|+|+ +.|+|||+||.|+||+. ++.+||+||
T Consensus 94 r~r~t~ylVf~~cehDLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iHr-~kilHRDmKaaNvLIt~-dgilklADF 168 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEHDLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIHR-NKILHRDMKAANVLITK-DGILKLADF 168 (376)
T ss_pred cccceeeeeHHHhhhhHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHHH-hhHHhhcccHhhEEEcC-CceEEeecc
Confidence 34456899999999988777754 45789999999999999999999999 79999999999999996 899999999
Q ss_pred ccccccccCC-----CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 018619 159 GSAKQLIAGE-----ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 233 (353)
Q Consensus 159 g~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 233 (353)
|+++.++..+ ..+..+.|.+|++||.+.|...|+++.|||+.|||+.+|.+|.+.+++++...++..|-...|..
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 9997654332 23345679999999999999999999999999999999999999999999999999999999988
Q ss_pred CHHHHhhcCcC--CCCCc---CCCCCCCccccccCC-CCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 234 TREEIRCMNPN--YTDFR---FPQIKAHPWHKVFHK-RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 234 ~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
+.+.+...+.- +...+ +++.+.+........ .-++++.||+.+||..||.+|++++++++|.||.+
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 87766544311 11111 122111111111110 12568999999999999999999999999999975
No 131
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.7e-46 Score=327.73 Aligned_cols=252 Identities=35% Similarity=0.577 Sum_probs=205.7
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccc------hHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY------KNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
|++.+.||+|+||+||++++..+++.||+|.+...... ..+|+.+++.++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 89999999999999999999999999999999765322 1248999999999999999998854 445889
Q ss_pred Eeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc-
Q 018619 87 VMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL- 164 (353)
Q Consensus 87 v~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~- 164 (353)
+||++.+ +|.+.+. ....+++..+..++.|++.||++||+ +|++|+||||+||+++. ++.++|+|||.+...
T Consensus 76 v~~~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp~NIl~~~-~~~~~l~Dfg~~~~~~ 149 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHS-KGIVHRDIKPENILLDE-NGEVKLIDFGSSVKLS 149 (260)
T ss_dssp EEEEETTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSGGGEEEST-TSEEEESSGTTTEEST
T ss_pred ccccccccccccccc----cccccccccccccccccccccccccc-ccccccccccccccccc-cccccccccccccccc
Confidence 9999997 7777766 35778999999999999999999999 79999999999999995 889999999999764
Q ss_pred ccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 165 IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
..........++..|+|||++.....++.++|+||+|+++|+|++|..||...+..+....+.+...........
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 224 (260)
T PF00069_consen 150 ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ----- 224 (260)
T ss_dssp STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc-----
Confidence 223333456779999999998634568999999999999999999999999885555544444432222111100
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.....++++.++|.+||+.||++|||+.++++||||
T Consensus 225 -----------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 225 -----------------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -----------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -----------------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 001124799999999999999999999999999998
No 132
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.8e-46 Score=338.38 Aligned_cols=245 Identities=27% Similarity=0.450 Sum_probs=197.6
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHH-HHHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRE-LQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E-~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|++..+++.||+|++.+... ...+| ..+++.++||||+++++++ .....+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 479999999999999999999999999864321 11223 3356778999999999888 3344588999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+.+ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~-~giiHrDlkp~Nili~~-~~~~kl~DfG~a~~~~~~ 149 (325)
T cd05602 76 DYINGGELFYHLQ----RERCFLEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDS-QGHIVLTDFGLCKENIEH 149 (325)
T ss_pred eCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECC-CCCEEEccCCCCcccccC
Confidence 99996 5554443 35678899999999999999999999 79999999999999996 788999999998754322
Q ss_pred -CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 -EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.......||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+....+... +
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~---~------------- 212 (325)
T cd05602 150 NGTTSTFCGTPEYLAPEVLHKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK---P------------- 212 (325)
T ss_pred CCCcccccCCccccCHHHHcCC-CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC---C-------------
Confidence 223445789999999999654 5899999999999999999999999988877665554431 0
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHH----HHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL----EACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~----~~l~hp~f~~~~~ 302 (353)
..+...+++.+.++|.+||+.||.+|+++. ++++|+||....+
T Consensus 213 -------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~ 259 (325)
T cd05602 213 -------------LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW 259 (325)
T ss_pred -------------cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence 001235789999999999999999999876 8999999987654
No 133
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=6.8e-46 Score=328.50 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=203.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.|++.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++|++++.+.+.+ .....+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE-----ecCCEE
Confidence 4788899999999999999999999999999886432 2234699999999999999998887 333458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|+||||+.+ +|...+.. .....+++..+..++.|++.||.|||+ +||+||||||+||+++. ++.++|+|||++..
T Consensus 76 ~lv~e~~~g~~L~~~l~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYH--MGEAGFEEGRAVFYAAEICCGLEDLHQ-ERIVYRDLKPENILLDD-HGHIRISDLGLAVH 151 (285)
T ss_pred EEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECC-CCCEEEeeccceee
Confidence 999999985 56555533 233468999999999999999999999 79999999999999996 77899999999976
Q ss_pred cccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 164 LIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...........|+..|+|||++.+. .++.++|+||+||++|+|++|..||..................
T Consensus 152 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~----------- 219 (285)
T cd05630 152 VPEGQTIKGRVGTVGYMAPEVVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----------- 219 (285)
T ss_pred cCCCccccCCCCCccccChHHHcCC-CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-----------
Confidence 5544433445789999999999654 4899999999999999999999999865432111111110000
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCC
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 303 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~ 303 (353)
....++..+++++.+|+++||+.||.+|+| ++++++||||+.+...
T Consensus 220 --------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05630 220 --------------VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFK 270 (285)
T ss_pred --------------hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHH
Confidence 001123457889999999999999999999 9999999999876443
No 134
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-45 Score=335.51 Aligned_cols=286 Identities=30% Similarity=0.532 Sum_probs=216.9
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCC------
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSK------ 79 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~------ 79 (353)
+.+|.+.+.||.|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 579999999999999999999999999999999885432 2345799999999999999998876432211
Q ss_pred ---CceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 80 ---NELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 80 ---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
.....|+||||+++++.+.+. ...+++..++.++.|++.||+|||+ +|++||||||+||+++..++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~-~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 84 SLTELNSVYIVQEYMETDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccceEEEEeecccccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCceEEEC
Confidence 113578999999987766553 3568999999999999999999999 7999999999999998657789999
Q ss_pred eeccccccccCCC----cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 018619 157 DFGSAKQLIAGEA----NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 157 Dfg~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|||.+........ .....++..|+|||.+.+...++.++||||+||++|+|++|+.||.+.+..+....+......
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999875432211 122356888999998766556889999999999999999999999988887777666655433
Q ss_pred CCHHHHhhcCcCCCCCcC--CCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 233 PTREEIRCMNPNYTDFRF--PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
.................. ......+... +...++.++++||++||+.||.+|||+.++++||||+.+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~ 308 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRD-LLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSC 308 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHH-HccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccC
Confidence 332211111000000000 0001111111 22357899999999999999999999999999999987643
No 135
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.7e-46 Score=352.02 Aligned_cols=254 Identities=27% Similarity=0.360 Sum_probs=210.3
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCC-CcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLET-GETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
..|.+.+.||+|++|.||+|.+..+ ++.||+|.+.... ....+|+.+++.++||||+++++.+. ....+|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~ 141 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLL 141 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEE
Confidence 3599999999999999999998877 7889999764332 23457999999999999999999884 334589
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||++ |+|.+.+........++++..++.++.|++.||.|||+ ++|+||||||+|||++. ++.+||+|||++...
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~~-~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS-RKMMHRDLKSANIFLMP-TGIIKLGDFGFSKQY 219 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCcCHHhEEECC-CCcEEEEeCcCceec
Confidence 9999998 57777776655566789999999999999999999999 79999999999999996 788999999999865
Q ss_pred ccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 165 IAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 165 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+.+..+.+..+......
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--------- 289 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--------- 289 (478)
T ss_pred CCccccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------
Confidence 44322 234568999999999865 45899999999999999999999999888776665554431000
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.++..++.++.+||.+||+.||++|||+.+++.|||++..
T Consensus 290 -------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 290 -------------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred -------------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 0123578899999999999999999999999999998753
No 136
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.5e-46 Score=341.18 Aligned_cols=254 Identities=25% Similarity=0.365 Sum_probs=198.7
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.++|...+.||+|+||.||++++..+++.||||++.... ..+.+|+.+++.++|+||+++++++ .....+
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 147 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEI 147 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeE
Confidence 467889999999999999999999999999999985432 3345899999999999999999988 444458
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
|+||||+.++.+ . ......+..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++...
T Consensus 148 ~lv~e~~~~~~L---~----~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~-~~~~kL~DfG~~~~~ 218 (353)
T PLN00034 148 QVLLEFMDGGSL---E----GTHIADEQFLADVARQILSGIAYLHR-RHIVHRDIKPSNLLINS-AKNVKIADFGVSRIL 218 (353)
T ss_pred EEEEecCCCCcc---c----ccccCCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcC-CCCEEEcccccceec
Confidence 899999997522 1 12345678888999999999999999 79999999999999996 788999999999865
Q ss_pred ccCC-CcceeeeeceeeChhhhhCC----CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGA----TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~----~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
.... ......||..|+|||.+... ...+.++|||||||++|+|++|+.||......+....+.......
T Consensus 219 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~------ 292 (353)
T PLN00034 219 AQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ------ 292 (353)
T ss_pred ccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC------
Confidence 4322 22345789999999987431 234568999999999999999999997433222211111100000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
....+..++.++++||.+||+.||++|||+.|+++||||.+...
T Consensus 293 -------------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 293 -------------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred -------------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 00112357899999999999999999999999999999988543
No 137
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.8e-46 Score=335.68 Aligned_cols=247 Identities=25% Similarity=0.444 Sum_probs=196.4
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|++..+++.||+|++.+.. ....+|+.++..+ +||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997532 2234788888877 699999999988 3344589999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc-
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA- 166 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~- 166 (353)
||+++ +|...+. ..+.+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~~~----~~~~l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nili~~-~~~~kl~Dfg~~~~~~~~ 149 (327)
T cd05617 76 EYVNGGDLMFHMQ----RQRKLPEEHARFYAAEICIALNFLHE-RGIIYRDLKLDNVLLDA-DGHIKLTDYGMCKEGLGP 149 (327)
T ss_pred eCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEeC-CCCEEEeccccceeccCC
Confidence 99985 5544443 34679999999999999999999999 79999999999999996 78899999999875332
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhh
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN------AVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
........||+.|+|||++.+. .++.++||||+||++|+|++|..||.... ..+...+.+.. .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~-------- 218 (327)
T cd05617 150 GDTTSTFCGTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--K-------- 218 (327)
T ss_pred CCceecccCCcccCCHHHHCCC-CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--C--------
Confidence 2233456789999999999654 58999999999999999999999996422 11222222110 0
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC------HHHHhcCcccccccCC
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT------ALEACAHPFFDELREP 303 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t------~~~~l~hp~f~~~~~~ 303 (353)
...++..++..+.++|++||+.||.+|++ .+++++||||+.+.+.
T Consensus 219 ------------------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~ 269 (327)
T cd05617 219 ------------------PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWD 269 (327)
T ss_pred ------------------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence 00123457899999999999999999998 4699999999987643
No 138
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.7e-45 Score=334.29 Aligned_cols=317 Identities=35% Similarity=0.615 Sum_probs=240.8
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC-CCc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 81 (353)
..++|.+.+.||+|++|.||++++..+++.||+|++.... ....+|+.+++.++|||++++.+++..... ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4778999999999999999999999999999999875421 223479999999999999999887743322 223
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
...++|+||++++|.+.+.. .++++..++.++.|++.||+|||+ .||+|+||||+||+++. ++.++|+|||++
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nill~~-~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNE-DCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCCEEEcccccc
Confidence 34889999999888776653 579999999999999999999999 79999999999999996 788999999999
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... .....++..|+|||.+.+...++.++||||+||++|+|++|+.||.+.+..+.+..+.+..+.+....+...
T Consensus 166 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 166 RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI 243 (343)
T ss_pred cccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence 865432 234567889999999866556789999999999999999999999998888888888887776665443322
Q ss_pred CcCCC-CC--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCCCCCCCCCCCCCC
Q 018619 242 NPNYT-DF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFN 318 (353)
Q Consensus 242 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~~~~~~~~~~~~~ 318 (353)
..... .+ ..+......+...+ ...++++.+||++||+.||.+|||+.++++||||++...... .+.++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~-----~~~~~~~~ 317 (343)
T cd07851 244 SSESARNYIQSLPQMPKKDFKEVF-SGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPED-----EPVAPPYD 317 (343)
T ss_pred cchhHHHHHHhccccCCCCHHHHh-ccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcc-----cccccccC
Confidence 21100 00 01111111222211 246899999999999999999999999999999998755432 22233333
Q ss_pred chhhhccCCHHHHhhccHHHHH
Q 018619 319 FKQELSGASPELVNKLIPDHVK 340 (353)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~ 340 (353)
..-+-......++..++..+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~ 339 (343)
T cd07851 318 QSFESRDLTVDEWKELVYKEIM 339 (343)
T ss_pred cchhhhhcCHHHHHHHhHHHHH
Confidence 3333345666667777666654
No 139
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.4e-46 Score=337.03 Aligned_cols=245 Identities=28% Similarity=0.451 Sum_probs=196.0
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHH-HHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNREL-QLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
++||+|+||.||+|++..+++.||+|.+.+.. ....+|. .+++.++||||+++++.+ .....+|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 47999999999999999999999999986432 1122333 467889999999999887 3344588999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
|||++ +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+||+++. ++.+||+|||++......
T Consensus 76 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~~ 149 (321)
T cd05603 76 DYVNGGELFFHLQ----RERCFLEPRARFYAAEVASAIGYLHS-LNIIYRDLKPENILLDS-QGHVVLTDFGLCKEGVEP 149 (321)
T ss_pred cCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECC-CCCEEEccCCCCccCCCC
Confidence 99986 5544443 35678999999999999999999999 79999999999999996 788999999998753222
Q ss_pred -CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 -EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.......||+.|+|||.+.+. .++.++||||+||++|+|++|..||.+.+.......+... +
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~---~------------- 212 (321)
T cd05603 150 EETTSTFCGTPEYLAPEVLRKE-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK---P------------- 212 (321)
T ss_pred CCccccccCCcccCCHHHhcCC-CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC---C-------------
Confidence 223345789999999998654 5899999999999999999999999888765554443321 0
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH----HHHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~----~~~l~hp~f~~~~~ 302 (353)
..++...+.++.++|.+||+.||.+|+++ .++++||||..+.+
T Consensus 213 -------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~ 259 (321)
T cd05603 213 -------------LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW 259 (321)
T ss_pred -------------CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence 01223468899999999999999999976 49999999987654
No 140
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.3e-46 Score=362.11 Aligned_cols=265 Identities=28% Similarity=0.417 Sum_probs=213.6
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
...++|.+.+.||+|+||+||+|++..+++.||+|.+... ...+.+|+.+++.++||||++++++|.... .
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~---~ 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA---N 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC---C
Confidence 3457999999999999999999999999999999988532 233457999999999999999999885432 3
Q ss_pred eeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC------CCeeeccCCCCcEEEeCC-----
Q 018619 82 LFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTV------PRVCHRDLKPQNLLVDPL----- 149 (353)
Q Consensus 82 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~------~~i~H~Dlkp~Nill~~~----- 149 (353)
..+|+||||+. ++|...+.........+++..++.|+.||+.||.|||+. ++|+||||||+||||+..
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 35889999998 578877776555567899999999999999999999982 139999999999999631
Q ss_pred -----------CCcEEEeeeccccccccCCCcceeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHhCCCCCCCC
Q 018619 150 -----------THQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGE 217 (353)
Q Consensus 150 -----------~~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~ 217 (353)
...+||+|||++.............||+.|+|||++.+. ..++.++|||||||+||+|++|..||...
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 235899999999876544444456789999999998643 35789999999999999999999999876
Q ss_pred ChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 218 NAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+....+...+... +. ++ ....+.++.+||.+||+.||.+|||+.|+|.|||+
T Consensus 247 ~~~~qli~~lk~~--p~---------------lp-----------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~i 298 (1021)
T PTZ00266 247 NNFSQLISELKRG--PD---------------LP-----------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQII 298 (1021)
T ss_pred CcHHHHHHHHhcC--CC---------------CC-----------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHH
Confidence 6555443333210 00 00 02368899999999999999999999999999999
Q ss_pred ccccCC
Q 018619 298 DELREP 303 (353)
Q Consensus 298 ~~~~~~ 303 (353)
+.+..+
T Consensus 299 k~i~~p 304 (1021)
T PTZ00266 299 KNVGPP 304 (1021)
T ss_pred hhcCCC
Confidence 876543
No 141
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.2e-45 Score=331.63 Aligned_cols=282 Identities=38% Similarity=0.641 Sum_probs=214.7
Q ss_pred eeeEeeeeecCCCeEEEEEEECC--CCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLE--TGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
+|.+.+.||+|++|.||+|.+.. +++.||+|.+.... ....+|+.+++.++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 58999999999999999999988 89999999987632 2345799999999999999999988432 224
Q ss_pred eEEEEeccccchHHHHHHhhhhcC-CCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC---CCCcEEEeee
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSAN-QRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP---LTHQVKICDF 158 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~-~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~---~~~~vkl~Df 158 (353)
.+++||||+++++...+....... ..+++..++.++.|++.||+|||+ ++|+||||||+||+++. .++.+||+||
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 78 SVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS-NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred eEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 588999999988887776544333 379999999999999999999999 79999999999999984 2578999999
Q ss_pred ccccccccCCC----cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChH---------HHHHH
Q 018619 159 GSAKQLIAGEA----NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV---------DQLVE 225 (353)
Q Consensus 159 g~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~---------~~~~~ 225 (353)
|++........ .....+++.|+|||.+.+...++.++|+||+||++|+|++|++||.+.+.. ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99886543322 223467889999999877666899999999999999999999999865533 34555
Q ss_pred HHHHhCCCCHHHHhhcC--cCCCC----CcCCCCCCCccccccC--CCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 226 IIKVLGTPTREEIRCMN--PNYTD----FRFPQIKAHPWHKVFH--KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 226 ~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+...++.+......... +.+.. ..............+. ...+.++.++|.+||+.||.+|||+.+++.||||
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 66666655544332111 11110 0000000000001111 2578899999999999999999999999999998
No 142
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.9e-46 Score=327.13 Aligned_cols=251 Identities=24% Similarity=0.403 Sum_probs=197.3
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
||+|+||.||++.++.+|+.||+|.+.... .....|+.+++.++||||+++++.+ .....+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999999999999999885422 2234689999999999999998887 4445689999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN 170 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~ 170 (353)
.| +|...+.. .....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.++|+|||++.........
T Consensus 76 ~g~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~-~~~~~l~Dfg~~~~~~~~~~~ 151 (277)
T cd05607 76 NGGDLKYHIYN--VGERGLEMERVIHYSAQITCGILHLHS-MDIVYRDMKPENVLLDD-QGNCRLSDLGLAVELKDGKTI 151 (277)
T ss_pred CCCCHHHHHHh--ccccCCCHHHHHHHHHHHHHHHHHHHH-CCEEEccCChHhEEEcC-CCCEEEeeceeeeecCCCcee
Confidence 85 55544432 233458899999999999999999999 79999999999999996 788999999999876554444
Q ss_pred ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcC
Q 018619 171 ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 250 (353)
Q Consensus 171 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
....+++.|+|||.+.+.. ++.++|+||+||++|+|++|..||...........+....... ....
T Consensus 152 ~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------~~~~ 217 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED-------------EVKF 217 (277)
T ss_pred eccCCCCCccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc-------------cccc
Confidence 4456889999999986654 8999999999999999999999997654322211221110000 0000
Q ss_pred CCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH----HHHhcCcccccccCC
Q 018619 251 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDELREP 303 (353)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~----~~~l~hp~f~~~~~~ 303 (353)
....+++++.+||++||+.||.+||++ ++++.||||+.+.++
T Consensus 218 -----------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~ 263 (277)
T cd05607 218 -----------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFP 263 (277)
T ss_pred -----------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHH
Confidence 013478999999999999999999999 678899999987543
No 143
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.2e-45 Score=333.85 Aligned_cols=288 Identities=38% Similarity=0.699 Sum_probs=232.6
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||+|.+..+++.||||++.... ....+|+.+++.++||||+++.+++..........+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 6899999999999999999999899999999886532 3456799999999999999999988555433334588
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
++|||+++++.+.+. ....+++..++.++.||+.||++||+ +||+|+||||+||+++. ++.++|+|||++....
T Consensus 81 lv~e~~~~~l~~~l~----~~~~l~~~~~~~i~~~l~~~l~~LH~-~gi~H~dlkp~nili~~-~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELMETDLHKVIK----SPQPLTDDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILVNS-NCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchhhhHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCCEEEcccCceEeec
Confidence 999999987766664 34589999999999999999999999 79999999999999996 7899999999998765
Q ss_pred cCC----CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 166 AGE----ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 166 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
... ......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+....+....+.+....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 543 2334567889999999977646899999999999999999999999999999999999988888876655421
Q ss_pred CcC-CCCC--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCC
Q 018619 242 NPN-YTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 306 (353)
Q Consensus 242 ~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~ 306 (353)
... ..++ ..+.....+|...+ ..++.++.+||++||++||.+|||+++++.||||++++.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~ 301 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLF-PGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDE 301 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhc-ccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccC
Confidence 111 0110 01111222333322 3478999999999999999999999999999999998766444
No 144
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.8e-45 Score=325.60 Aligned_cols=276 Identities=36% Similarity=0.665 Sum_probs=221.7
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
+|++.+.||.|++|.||+|.+..+|+.||||.+.... ....+|+.+++.++||||+++++.+.. ....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-----ENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-----CCcEEE
Confidence 5899999999999999999999999999999886432 234579999999999999999998843 334889
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
||||+++++.+.+.... ....+++..+..++.|++.||+|||+ .|++|+||||+||++++ ++.++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~h~dl~p~ni~~~~-~~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 76 VFEYMDKDLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHE-NRVLHRDLKPQNLLINK-RGELKLADFGLARAFGI 152 (284)
T ss_pred EEecCCccHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECC-CCcEEEeecchhhhhcC
Confidence 99999998877765422 23568999999999999999999999 79999999999999996 78899999999975433
Q ss_pred CC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCC
Q 018619 167 GE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 245 (353)
Q Consensus 167 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
.. ......++..|+|||.+.+...++.++|+||+||++|+|++|..||.+.+..+...++.+....+....+.... ..
T Consensus 153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 231 (284)
T cd07836 153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS-QL 231 (284)
T ss_pred CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh-cC
Confidence 22 12334568899999998776667899999999999999999999999998888888888887777765554332 11
Q ss_pred CC--CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 246 TD--FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 246 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.. ..++......+.. +....+.++.++|.+||+.||.+||++.++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQ-LFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred chhcccccCCChHHHHH-HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 11 1122222222211 223468899999999999999999999999999998
No 145
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5e-46 Score=336.31 Aligned_cols=281 Identities=26% Similarity=0.424 Sum_probs=205.7
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
+..++|++.+.||+|+||.||++.+..++..+|+|.+.... ....+|+.+++.++||||+++++++.. ..
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 76 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DG 76 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CC
Confidence 34689999999999999999999999999999999876432 235689999999999999999998843 34
Q ss_pred eEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+++||||+.+ +|.+.+. ..+.+++..+..++.|++.||.|||+.++++|+||||+|||++. ++.+||+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~ 151 (333)
T cd06650 77 EISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVS 151 (333)
T ss_pred EEEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC-CCCEEEeeCCcc
Confidence 58899999985 6666654 34678999999999999999999997237999999999999996 788999999998
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCCHHHHhh
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTPTREEIRC 240 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (353)
...... ......++..|+|||++.+. .++.++|+||+||++|+|++|..||......+....+... .+.+.......
T Consensus 152 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (333)
T cd06650 152 GQLIDS-MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSP 229 (333)
T ss_pred hhhhhh-ccccCCCCccccCHHHhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCc
Confidence 755332 22345688999999998654 4899999999999999999999999876553332211100 00000000000
Q ss_pred cC-c------CCCCCcCCCCC--------CCcccccc-CCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 241 MN-P------NYTDFRFPQIK--------AHPWHKVF-HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 241 ~~-~------~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.. . .+.....+... .......+ ...++.++++||.+||++||++|||+.|++.||||+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 230 RPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred ccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 00 0 00000000000 00000001 12367899999999999999999999999999999864
No 146
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-47 Score=316.56 Aligned_cols=320 Identities=30% Similarity=0.509 Sum_probs=247.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCC-
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKN- 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~- 80 (353)
....+|.-.+.+|.|+- .|..|.+..++++||+|+.... .+...+|..++..++|+||++++.+|.......
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence 44678999999999998 7888999999999999988543 345568999999999999999999985544321
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
...+|+|||+|..+|-..+. -.++-..+..++.|++.|++|||+ .||+||||||+||+++. ++.+||.|||+
T Consensus 93 ~~e~y~v~e~m~~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs-~~IihRdLkPsnivv~~-~~~lKi~dfg~ 164 (369)
T KOG0665|consen 93 FQEVYLVMELMDANLCQVIL------MELDHETISYILYQMLCGIKHLHS-AGIIHRDLKPSNIVVNS-DCTLKILDFGL 164 (369)
T ss_pred HHhHHHHHHhhhhHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHh-cceeecccCcccceecc-hhheeeccchh
Confidence 22488999999998877665 346678899999999999999999 79999999999999996 88999999999
Q ss_pred ccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 161 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 161 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
|+.....-..+.++.|+.|+|||++.+.+ |...+||||+||++.||++|+..|.+.+..++..++.+.+|.|....+..
T Consensus 165 ar~e~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 165 ARTEDTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred hcccCcccccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 98765554566789999999999999877 99999999999999999999999999999999999999999999887766
Q ss_pred cCcCCCC----------CcCCC-CCCCccccccCC--CCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCCC
Q 018619 241 MNPNYTD----------FRFPQ-IKAHPWHKVFHK--RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 307 (353)
Q Consensus 241 ~~~~~~~----------~~~~~-~~~~~~~~~~~~--~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~~ 307 (353)
+.+.-.. +.+.. ++...|...... .-+..++|++.+||-.||++|.|++++|+||||+=+-..+ .
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~~~--e 321 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYDPD--E 321 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeecccc--c
Confidence 5433211 11111 122222222211 1245789999999999999999999999999999432222 1
Q ss_pred CCCCCCCCCCCchhhhccCCHHHHhhccHHHHH
Q 018619 308 PNGRPLPPLFNFKQELSGASPELVNKLIPDHVK 340 (353)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (353)
...++.+ ......+..+.+.+.+..++..+++
T Consensus 322 v~ap~pe-~~d~~~d~~~~t~~e~ke~If~ev~ 353 (369)
T KOG0665|consen 322 VEAPPPE-IYDKQLDEREHTIEEWKELIFKEVQ 353 (369)
T ss_pred ccCCCCc-hhhhhcccccCCHHHHHHHHHHHHH
Confidence 2222222 1212223444557777766666665
No 147
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.7e-45 Score=331.67 Aligned_cols=287 Identities=37% Similarity=0.631 Sum_probs=226.2
Q ss_pred eeeEeeeeecCCCeEEEEEEECCC--CcEEEEEEeeccc------cchHHHHHHHHHc-CCCceeecceeeeecCCCCce
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLET--GETVAIKKVLQDR------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 82 (353)
+|.+.+.||+|+||.||++.+..+ +..||+|.+.... ....+|+.+++.+ +||||+++++...... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 589999999999999999999888 8999999886421 2345799999988 5999999988654322 2234
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+|+++++++++|...+. ....+++..++.++.||+.||+|||+ +|++||||||+||+++. ++.+||+|||++.
T Consensus 80 ~~~~~~e~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~givH~dlkp~Nili~~-~~~~kl~Dfg~a~ 153 (332)
T cd07857 80 ELYLYEELMEADLHQIIR----SGQPLTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNA-DCELKICDFGLAR 153 (332)
T ss_pred cEEEEEecccCCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHeEEcC-CCCEEeCcCCCce
Confidence 478999999988777664 35679999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCC-----cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 163 QLIAGEA-----NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 163 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
....... .....+|+.|+|||.+.+...++.++|+||+||++|+|++|.+||...+....+..++..++.+....
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 6543221 22346789999999986655689999999999999999999999999999999999999999887765
Q ss_pred HhhcCcCCCC---CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCC
Q 018619 238 IRCMNPNYTD---FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 306 (353)
Q Consensus 238 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~ 306 (353)
+......... ..........+.. .....+..+.+|+.+||+.||.+|||+.+++.||||++++++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~ 304 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDE 304 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCcccc
Confidence 5433221100 0011111111111 112468899999999999999999999999999999998776443
No 148
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.8e-45 Score=327.55 Aligned_cols=283 Identities=29% Similarity=0.517 Sum_probs=216.4
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC---CC
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS---KN 80 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~ 80 (353)
.++|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||+++++++..... ..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 468999999999999999999999999999999885432 123479999999999999999998754332 22
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
....++||||+.+++...+.. ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dl~p~nil~~~-~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHR-NKILHRDMKAANILITK-DGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECC-CCcEEECcCCC
Confidence 345789999999987776653 34578999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCc-----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 161 AKQLIAGEAN-----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 161 a~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
+......... ....++..|+|||.+.+...++.++|+||+|+++|+|++|..||.+.+.......+....+..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 9765433221 23456788999999876655788999999999999999999999988887777766666665554
Q ss_pred HHHhhcC--cCCCCCcCCCCCCCccccccC-CCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 236 EEIRCMN--PNYTDFRFPQIKAHPWHKVFH-KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 236 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..+.... ..+....++..........+. ...+..+.+||.+||+.||.+|||++++++||||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 4322110 000111111111111111111 1236788999999999999999999999999998
No 149
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.8e-45 Score=324.12 Aligned_cols=278 Identities=35% Similarity=0.615 Sum_probs=212.3
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.++|++.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++|+||+++++++. .....
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~~ 78 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----TKETL 78 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----cCCeE
Confidence 478999999999999999999999999999999885432 23457999999999999999999873 33458
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
|+||||+.+++...+.. ....+++..++.++.|++.||+|||+ +||+|+||||+||+++. ++.+||+|||++...
T Consensus 79 ~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nil~~~-~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 79 TFVFEYMHTDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHG-QHILHRDLKPQNLLISY-LGELKLADFGLARAK 153 (291)
T ss_pred EEEEecccCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEEcC-CCcEEEecccccccc
Confidence 89999999887766543 34567888999999999999999999 79999999999999996 788999999998754
Q ss_pred ccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.... ......+++.|+|||.+.+...++.++|+||+||++|+|++|..||...+ ..+.+.++...++.|.........
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 3322 12334568899999998665567889999999999999999999997654 345566666666766554332211
Q ss_pred --cCCCCCcCCCCCCCccccccC-CCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 243 --PNYTDFRFPQIKAHPWHKVFH-KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 243 --~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+.+....++............ -..+.++.+++.+||+.||++|||+.|++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 111111111111111000000 0136789999999999999999999999999998
No 150
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.2e-45 Score=324.87 Aligned_cols=257 Identities=26% Similarity=0.399 Sum_probs=204.4
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-----chHHHHH-HHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQ-LMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
++|++.+.||+|+||.||++.++.+|+.||||.+..... ....|+. .++.++|||++++++.+.. ...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-----~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-----EGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-----CCcE
Confidence 479999999999999999999999999999998865421 2223444 4667799999999998843 3348
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCC-CeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVP-RVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~-~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|++|||++++|.+.+.........+++..++.++.|++.||+|||+ + +++||||||+||+++. ++.+||+|||++..
T Consensus 76 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~i~h~dlkp~nil~~~-~~~~kl~dfg~~~~ 153 (283)
T cd06617 76 WICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS-KLSVIHRDVKPSNVLINR-NGQVKLCDFGISGY 153 (283)
T ss_pred EEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCeecCCCCHHHEEECC-CCCEEEeecccccc
Confidence 8999999998888887655556789999999999999999999999 6 9999999999999996 78899999999986
Q ss_pred cccCCCcceeeeeceeeChhhhhCC---CCCCccccchhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHh
Q 018619 164 LIAGEANISYICSRFYRAPELIFGA---TEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (353)
...........++..|+|||.+.+. ..++.++|+||+||++|+|++|+.||.... ..+.+...... ...
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~----- 226 (283)
T cd06617 154 LVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE--PSP----- 226 (283)
T ss_pred cccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--CCC-----
Confidence 5443333345678899999988542 346889999999999999999999996532 22333222211 000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
.+ ....+|.++.++|.+||+.||.+|||++++++||||....
T Consensus 227 ---------~~-----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 227 ---------QL-----------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred ---------CC-----------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 00 0123688999999999999999999999999999999854
No 151
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.2e-45 Score=321.38 Aligned_cols=248 Identities=28% Similarity=0.502 Sum_probs=202.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---------cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
++|.+.+.||+|++|.||.+.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ ...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccC
Confidence 57999999999999999999999999999999875331 2345799999999999999999988 333
Q ss_pred eeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
..+++++||+++ +|.+.+. ....+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||+
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nilv~~-~~~~~l~dfg~ 150 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLK----AYGALTETVTRKYTRQILEGVEYLHS-NMIVHRDIKGANILRDS-AGNVKLGDFGA 150 (263)
T ss_pred CeEEEEEEECCCCcHHHHHH----HhCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCCEEEeeccc
Confidence 468999999985 5555554 34568999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCc----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 161 AKQLIAGEAN----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 161 a~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
+......... ....++..|+|||.+.+.. ++.++||||+||++|+|++|+.||...+.......+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----- 224 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT----- 224 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC-----
Confidence 8755332211 2345678899999996654 89999999999999999999999987665544433322100
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
...++..++.++.++|.+||..||.+|||+.++++||||
T Consensus 225 ----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 225 ----------------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ----------------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 111334578999999999999999999999999999997
No 152
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.8e-45 Score=323.75 Aligned_cols=257 Identities=27% Similarity=0.416 Sum_probs=207.3
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.|+..+.||+|+||+||++.+..+++.||+|.+.... ....+|+.+++.++|+|++.+.+.+ ......
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEE
Confidence 4788899999999999999999999999999885432 2245799999999999999998887 334458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|++|||+.+ +|...+.. .....+++..+..++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~iiH~dikp~Nili~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYN--MGNPGFEEERALFYAAEILCGLEDLHR-ENTVYRDLKPENILLDD-YGHIRISDLGLAVK 151 (285)
T ss_pred EEEEEeccCccHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEECC-CCCEEEecCCccee
Confidence 899999996 45444432 234579999999999999999999999 79999999999999996 77899999999976
Q ss_pred cccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 164 LIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...........|+..|+|||.+.+. .++.++|+||+||++|+|++|..||...........+........
T Consensus 152 ~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--------- 221 (285)
T cd05632 152 IPEGESIRGRVGTVGYMAPEVLNNQ-RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--------- 221 (285)
T ss_pred cCCCCcccCCCCCcCccChHHhcCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc---------
Confidence 5444433455789999999998654 589999999999999999999999987766544443333211110
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCC
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 303 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~ 303 (353)
..+...++.++.+|+.+||+.||.+||| +++++.||||+.....
T Consensus 222 ----------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05632 222 ----------------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK 270 (285)
T ss_pred ----------------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence 0122457889999999999999999999 8899999999987543
No 153
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.2e-45 Score=323.55 Aligned_cols=277 Identities=35% Similarity=0.667 Sum_probs=215.0
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
++|++.+.||+|++|.||+|.+..+++.||+|.+.+.. ....+|+.+++.++||||+++++++ ......
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 57999999999999999999999899999999875432 2345799999999999999999988 444568
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
|+||||+.+++...+.. ....+++..+..++.|++.||+|||+ .|++|+||+|+||++++ ++.++|+|||++...
T Consensus 76 ~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~h~~l~p~ni~~~~-~~~~~l~dfg~~~~~ 150 (286)
T cd07846 76 YLVFEFVDHTVLDDLEK---YPNGLDESRVRKYLFQILRGIEFCHS-HNIIHRDIKPENILVSQ-SGVVKLCDFGFARTL 150 (286)
T ss_pred EEEEecCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECC-CCcEEEEeeeeeeec
Confidence 99999999865544432 34568999999999999999999999 79999999999999996 788999999998865
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC-
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN- 242 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (353)
..... .....++..|+|||.+.+...++.++||||+||++|+|++|.+||...+..+....+....+...........
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07846 151 AAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQK 230 (286)
T ss_pred cCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhcc
Confidence 44332 2345678899999998765567889999999999999999999999888777777777665554322111111
Q ss_pred -cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 243 -PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+.......+......-.......++..+.+|+.+||+.||++|||+.++++||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0001111111111100111123578999999999999999999999999999998
No 154
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=9.5e-45 Score=325.10 Aligned_cols=281 Identities=32% Similarity=0.613 Sum_probs=220.0
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC---CC
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS---KN 80 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~ 80 (353)
.++|++.+.||+|++|.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++.+..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 689999999999999999999999999999999885321 234579999999999999999988754332 22
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
...+++||||+.+++...+.. ....+++..++.++.|++.||+|||+ +|++|+||||+||++++ ++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHE-NHILHRDIKAANILIDN-QGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCcCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCCEEECcCcc
Confidence 346789999999887666543 34579999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCC------------cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 018619 161 AKQLIAGEA------------NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 228 (353)
Q Consensus 161 a~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~ 228 (353)
+........ .....+++.|+|||.+.+...++.++||||+||++|+|++|.+||.+.+.......+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 975543221 12235688899999987665688999999999999999999999999988888888888
Q ss_pred HhCCCCHHHHhhcC--cCCCC-CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 229 VLGTPTREEIRCMN--PNYTD-FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 229 ~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..+.+....+.... +.... ...... .......+ ..+++++.+||.+||+.||.+|||+.++++||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNY-PRTLEERF-GKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCC-CccHHHHc-ccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 77766554332211 11110 000110 11111111 2356889999999999999999999999999998
No 155
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-47 Score=335.66 Aligned_cols=249 Identities=30% Similarity=0.548 Sum_probs=212.1
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
.++||+|.||+||.++++.+|+.||||++.+- ......|+.||+.+.||.||.+.-.| +....+++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-----ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-----ETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----cCCceEEEEeh
Confidence 47899999999999999999999999988543 34556899999999999999998777 44555889999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCC--CcEEEeeeccccccccC
Q 018619 90 YVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLT--HQVKICDFGSAKQLIAG 167 (353)
Q Consensus 90 ~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~--~~vkl~Dfg~a~~~~~~ 167 (353)
-+.|++++.+.. ...+++++.....++.||+.||+|||. ++|+|+||||+|||+.+.+ .++||||||+|+.+.+.
T Consensus 644 Kl~GDMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~-knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 644 KLHGDMLEMILS--SEKGRLPERITKFLVTQILVALRYLHF-KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred hhcchHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhh-cceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 999998887764 456899999999999999999999999 7999999999999997533 37999999999999888
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
....+.+|||.|+|||++... .|+..-|+||.|||+|.-+.|..||....+... +|.+. .
T Consensus 721 sFRrsVVGTPAYLaPEVLrnk-GyNrSLDMWSVGVIiYVsLSGTFPFNEdEdInd--QIQNA-----------------a 780 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNK-GYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIND--QIQNA-----------------A 780 (888)
T ss_pred hhhhhhcCCccccCHHHHhhc-cccccccceeeeEEEEEEecccccCCCccchhH--Hhhcc-----------------c
Confidence 888889999999999999654 599999999999999999999999966543322 22221 1
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
|-+ +..+|.+ +++++.|||+.+|+..-.+|.|++..|+|||+++.
T Consensus 781 FMy---Pp~PW~e-----is~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 781 FMY---PPNPWSE-----ISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred ccc---CCCchhh-----cCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 111 2356644 89999999999999999999999999999999864
No 156
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.4e-45 Score=322.67 Aligned_cols=277 Identities=35% Similarity=0.678 Sum_probs=221.5
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
++|++.+.||+|++|.||+|.+..+++.||+|.+... .....+|+.+++.++|+||+++++++.. ....
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 4799999999999999999999999999999987532 2345689999999999999999999844 3358
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+++|||+++++...+.. ....+++..++.++.|++.||.|||+ ++++|+||+|+||+++. ++.+||+|||++...
T Consensus 76 ~iv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~ni~~~~-~~~~kl~d~g~~~~~ 150 (288)
T cd07833 76 YLVFEYVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHS-HNIIHRDIKPENILVSE-SGVLKLCDFGFARAL 150 (288)
T ss_pred EEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCCEEEEeeeccccc
Confidence 89999999876665443 34568999999999999999999999 79999999999999996 888999999998876
Q ss_pred ccCC--CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 165 IAGE--ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 165 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.... ......++..|+|||.+.+...++.++|+||+|+++|+|++|.+||.+.+..+.+..+....+...........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 151 RARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred CCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 5543 23345678899999999776468999999999999999999999999888888777777766655544332221
Q ss_pred --cCCCCCcCCCC-CCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 243 --PNYTDFRFPQI-KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 243 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..+....++.. ....+...++..++.++.+||++||..||++|||+++++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 11111111111 11222333445568999999999999999999999999999998
No 157
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7e-46 Score=330.32 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=199.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcC-CCceeecceeeeecCCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMD-HPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 80 (353)
+.+..|++.+.||+||.+.||++... ..+.||+|++.... .-...|+.+|.+|+ |.+|++++++= -+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v~ 431 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----VT 431 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----cc
Confidence 55678999999999999999999854 44577777664322 22357999999995 89999998865 34
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
+.++|+||||-+.+|-..|... ...++...++.+..|++.|++++|+ +||||.||||.|+|+- .|.+||+|||+
T Consensus 432 d~~lYmvmE~Gd~DL~kiL~k~---~~~~~~~~lk~ywkqML~aV~~IH~-~gIVHSDLKPANFLlV--kG~LKLIDFGI 505 (677)
T KOG0596|consen 432 DGYLYMVMECGDIDLNKILKKK---KSIDPDWFLKFYWKQMLLAVKTIHQ-HGIVHSDLKPANFLLV--KGRLKLIDFGI 505 (677)
T ss_pred CceEEEEeecccccHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHHH-hceeecCCCcccEEEE--eeeEEeeeech
Confidence 6679999999888998888763 3344545899999999999999999 8999999999999998 58899999999
Q ss_pred ccccccCCCc---ceeeeeceeeChhhhhCCC----------CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 018619 161 AKQLIAGEAN---ISYICSRFYRAPELIFGAT----------EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 227 (353)
Q Consensus 161 a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~----------~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~ 227 (353)
|..+...... .+.+||+.|||||.+.... ..+.+|||||||||||+|+.|++||..... ....+
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n---~~aKl 582 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN---QIAKL 582 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH---HHHHH
Confidence 9877665443 3568999999999984422 146799999999999999999999965432 22222
Q ss_pred HHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 228 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
..+..|. .+++||.+. -..++.++++.||+.||.+|||+.++|+|||++-
T Consensus 583 ~aI~~P~-----------~~Iefp~~~-----------~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 583 HAITDPN-----------HEIEFPDIP-----------ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred HhhcCCC-----------ccccccCCC-----------CchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 2233332 122333321 1234999999999999999999999999999975
No 158
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.9e-44 Score=327.68 Aligned_cols=286 Identities=35% Similarity=0.588 Sum_probs=223.8
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC-CCc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 81 (353)
..++|.+.+.||+|+||.||++.+..+++.||+|++.... ....+|+.+++.++||||+++++++..... ...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 4689999999999999999999999999999999886432 234579999999999999999988743322 222
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
...|++++++++++.+.+. ...+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++
T Consensus 95 ~~~~lv~~~~~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~-~~~~kl~dfg~~ 167 (345)
T cd07877 95 NDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNE-DCELKILDFGLA 167 (345)
T ss_pred ccEEEEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEcC-CCCEEEeccccc
Confidence 3478999999888766554 2468999999999999999999999 79999999999999996 788999999998
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
..... ......++..|+|||.+.+...++.++|+||+||++|+|++|..||...+....+..+....+.+........
T Consensus 168 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T cd07877 168 RHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 245 (345)
T ss_pred ccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 75432 2234567889999999866556889999999999999999999999988888888888777777665554333
Q ss_pred CcCCCCC---cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 242 NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 242 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
....... ..+......+... ....++++++||.+||+.||.+|+|+.++++||||+++..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~ 310 (345)
T cd07877 246 SSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 310 (345)
T ss_pred ccHhHHHHHHHhcccCCcchhhh-cCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCC
Confidence 2111000 0011111111111 124688999999999999999999999999999999876543
No 159
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2e-44 Score=327.13 Aligned_cols=284 Identities=37% Similarity=0.645 Sum_probs=222.2
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCC-Cce
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSK-NEL 82 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~ 82 (353)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++.+.. ....+|+.+++.++||||+++++++...... ...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 568999999999999999999999999999999886421 2245799999999999999999987543321 223
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+|+|+||+..++.... ...+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++.
T Consensus 94 ~~~lv~e~~~~~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dlkp~NIll~~-~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQTDLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAVNE-DCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccccCHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEeeCCCCc
Confidence 46899999987654432 2468999999999999999999999 79999999999999996 7899999999987
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.... ......+++.|+|||.+.+...++.++|+||+||++|+|++|+.||.+.+....+..++...+.+.........
T Consensus 166 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T cd07879 166 HADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLE 243 (342)
T ss_pred CCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhc
Confidence 5432 22345678899999998665558899999999999999999999999988888888888877766654433221
Q ss_pred cCCC-CC--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 243 PNYT-DF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 243 ~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
.... .+ ..+......+...+ ...+.++.+||++||+.||.+|||+++++.||||..++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 244 DKAAKSYIKSLPKYPRKDFSTLF-PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDAD 307 (342)
T ss_pred ccchHHHHhhcCCcccchHHHHh-cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence 1100 00 01111122222212 24688999999999999999999999999999999987543
No 160
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.5e-45 Score=322.80 Aligned_cols=274 Identities=39% Similarity=0.731 Sum_probs=222.0
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
|.+.+.||+|++|.||++.+..+++.+++|.+.... ....+|+.+++.++|+||+++++.+.. ....++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-----KGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-----CCCEEE
Confidence 678899999999999999999999999999886442 234579999999999999999998733 345889
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
++||+++++...+.. ....+++..+..++.|++.||.|||+ ++++|+||||+||+++. ++.++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~-~~~~~l~df~~~~~~~~ 150 (283)
T cd05118 76 VFEFMDTDLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFCHS-HGILHRDLKPENLLINT-EGVLKLADFGLARSFGS 150 (283)
T ss_pred EEeccCCCHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHHHH-CCeeecCcCHHHEEECC-CCcEEEeeeeeeEecCC
Confidence 999999987777654 34679999999999999999999999 79999999999999996 78899999999986654
Q ss_pred CC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc--
Q 018619 167 GE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP-- 243 (353)
Q Consensus 167 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 243 (353)
.. ......++..|+|||.+.+...++.++|+||+|+++|+|++|+.||...+..+....+....+.+....+.....
T Consensus 151 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 151 PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred CcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence 43 223345788899999987664689999999999999999999999999999888888888888776655443332
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
......++....... ......++.++.+||.+||+.||.+||++.++++||||
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 231 RNYKFSFPKKAGMPL-PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhccccccCH-HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 111222222222221 11223578999999999999999999999999999997
No 161
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=5.9e-45 Score=329.94 Aligned_cols=280 Identities=36% Similarity=0.578 Sum_probs=220.1
Q ss_pred ecceeeE-eeeeecCCCeEEEEEEECCCCcEEEEEEeecccc------------------chHHHHHHHHHcCCCceeec
Q 018619 9 QTISYMA-ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------------------YKNRELQLMRVMDHPNVISL 69 (353)
Q Consensus 9 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------------------~~~~E~~~l~~l~h~~iv~~ 69 (353)
..++|.. .+.||+|+||.||+|.+..+++.||+|++..... ...+|+.+++.++||||+++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 85 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL 85 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence 3567864 5789999999999999999999999998854321 24579999999999999999
Q ss_pred ceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC
Q 018619 70 KHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL 149 (353)
Q Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~ 149 (353)
++++. .....+++|||+.+++.+.+. ....+++..+..++.|++.||+|||+ +|++|+||+|+||+++.
T Consensus 86 ~~~~~-----~~~~~~lv~e~~~~~l~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~-~~i~H~dl~~~nill~~- 154 (335)
T PTZ00024 86 VDVYV-----EGDFINLVMDIMASDLKKVVD----RKIRLTESQVKCILLQILNGLNVLHK-WYFMHRDLSPANIFINS- 154 (335)
T ss_pred eEEEe-----cCCcEEEEEeccccCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHeEECC-
Confidence 99883 334588999999998777664 34678999999999999999999999 79999999999999996
Q ss_pred CCcEEEeeeccccccccC---------------CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCC
Q 018619 150 THQVKICDFGSAKQLIAG---------------EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 214 (353)
Q Consensus 150 ~~~vkl~Dfg~a~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf 214 (353)
++.++|+|||.+...... .......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 234 (335)
T PTZ00024 155 KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLF 234 (335)
T ss_pred CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 788999999998765411 11122345788999999877666799999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCCCHHHHhhcC--cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 215 PGENAVDQLVEIIKVLGTPTREEIRCMN--PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.+.+..+.+..+....+.+....+.... +.+.. +.......... .....+.++.++|.+||+.||++|||+++++
T Consensus 235 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 235 PGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTE--FTPRKPKDLKT-IFPNASDDAIDLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred CCCCHHHHHHHHHHHhCCCchhhCcchhhcccccc--cCcCCcccHHH-hCcCCChHHHHHHHHHcCCCchhccCHHHHh
Confidence 9999988888888887777654332111 00000 00000111111 1234688999999999999999999999999
Q ss_pred cCcccccccC
Q 018619 293 AHPFFDELRE 302 (353)
Q Consensus 293 ~hp~f~~~~~ 302 (353)
.||||+....
T Consensus 312 ~~~~~~~~~~ 321 (335)
T PTZ00024 312 KHEYFKSDPL 321 (335)
T ss_pred cCcccCCCCC
Confidence 9999987543
No 162
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.2e-44 Score=321.66 Aligned_cols=261 Identities=25% Similarity=0.379 Sum_probs=208.9
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.++|.+.+.||+|+||.||++.+..+++.+|+|.+.... ....+|+.+++.+ +|||++++++++...........+
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 578999999999999999999999999999999886432 3345788999988 899999999988665444445688
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+.........+++..++.++.|++.||+|||+ ++++|+||||+||+++. ++.+||+|||++...
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~nili~~-~~~~kl~dfg~~~~~ 178 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN-NRIIHRDVKGNNILLTT-EGGVKLVDFGVSAQL 178 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcC-CCCEEEeecccchhc
Confidence 99999985 6766665544456789999999999999999999999 79999999999999996 778999999998865
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCC----CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGAT----EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~----~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
..... .....++..|+|||.+.... .++.++|+||+||++|+|++|+.||...+....+..+.+. +.
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~----- 250 (291)
T cd06639 179 TSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN---PP----- 250 (291)
T ss_pred ccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CC-----
Confidence 43322 23346788899999975432 2578999999999999999999999877655444333221 00
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
+ ....+...+..+.+||.+||+.||++||++.++++||||+
T Consensus 251 -----------~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 251 -----------P-------TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred -----------C-------CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 0 0001124577899999999999999999999999999994
No 163
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-46 Score=323.40 Aligned_cols=257 Identities=30% Similarity=0.456 Sum_probs=217.8
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHHHHHHHHc-CCCceeecceeeeecCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRVM-DHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 79 (353)
+...+|..+.+||.|+||+|.+|..+.|.+.||||++.++.. ....|.++|... +-|.+++++.+| +
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF-----Q 420 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF-----Q 420 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----h
Confidence 445678899999999999999999999999999999877642 233577777665 467889998888 4
Q ss_pred CceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 80 NELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 80 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
.-..+|+||||+.|+ .|..++.+-+++.+..+..++.+|+.||-+||+ +||++||||.+||++|. ++.+||+|||
T Consensus 421 TmDRLyFVMEyvnGG---DLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~-kgIiYRDLKLDNvmLd~-eGHiKi~DFG 495 (683)
T KOG0696|consen 421 TMDRLYFVMEYVNGG---DLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDS-EGHIKIADFG 495 (683)
T ss_pred hhhheeeEEEEecCc---hhhhHHHHhcccCCchhhhhhHHHHHHhhhhhc-CCeeeeeccccceEecc-CCceEeeecc
Confidence 444499999999975 233334456889999999999999999999999 89999999999999997 7889999999
Q ss_pred cccccc-cCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 160 SAKQLI-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 160 ~a~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
+++... .+....+.+|||.|+|||++ ..++|+.++|+||+||+||||+.|++||.+.+..+..+.|++.
T Consensus 496 mcKEni~~~~TTkTFCGTPdYiAPEIi-~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh--------- 565 (683)
T KOG0696|consen 496 MCKENIFDGVTTKTFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH--------- 565 (683)
T ss_pred cccccccCCcceeeecCCCcccccceE-EecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc---------
Confidence 998644 34445678999999999998 4567999999999999999999999999999999999988873
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH-----HHHhcCcccccccCCC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELREPN 304 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~~~l~hp~f~~~~~~~ 304 (353)
...+++.+|.++.+++..+|.+.|.+|+.+ .++..||||+.+.|..
T Consensus 566 --------------------nvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek 616 (683)
T KOG0696|consen 566 --------------------NVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEK 616 (683)
T ss_pred --------------------cCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHH
Confidence 122457899999999999999999999864 5899999999998753
No 164
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.6e-45 Score=330.32 Aligned_cols=287 Identities=35% Similarity=0.681 Sum_probs=226.3
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHc-CCCceeecceeeeecCCCCc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 81 (353)
..++|.+.+.||+|+||.||++.+..+++.+|+|++.+. .....+|+.+++.+ +||||+++++++.. .+.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 357899999999999999999999989999999988542 22345799999999 99999999988733 223
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
...|+||||+.++|...+.. ..+++..++.++.|++.||+|||+ +||+|+||||+||+++. ++.+||+|||++
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~-~~i~H~dl~p~nill~~-~~~~kl~d~g~~ 154 (337)
T cd07852 82 KDIYLVFEYMETDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHS-GNVIHRDLKPSNILLNS-DCRVKLADFGLA 154 (337)
T ss_pred ceEEEEecccccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcC-CCcEEEeeccch
Confidence 45789999999887766543 378889999999999999999999 79999999999999996 889999999999
Q ss_pred cccccCC------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 162 KQLIAGE------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 162 ~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
....... ......++..|+|||.+.+...++.++|+||+||++|+|++|+.||.+....+....+....+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 155 RSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred hccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 8654332 1223567889999998866566889999999999999999999999998888888888888777765
Q ss_pred HHHhhcCcCCCCCcC---CCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCCCC
Q 018619 236 EEIRCMNPNYTDFRF---PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 306 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~~~ 306 (353)
..+..+........+ +......... ....++.++.++|.+||+.||++|||+.++++||||+++..+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~ 307 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDE-LLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDE 307 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhh-hccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCC
Confidence 544433221111101 1111111112 223478999999999999999999999999999999998765444
No 165
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1e-44 Score=320.65 Aligned_cols=274 Identities=35% Similarity=0.669 Sum_probs=216.6
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
|++.+.||.|++|.||++.+..+|+.||+|++.... ....+|+.+++.++|||++++++.+. .....|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 678899999999999999999999999999886432 23457999999999999999999883 3355889
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
+|||+++++.+.+... ....+++..+..++.|++.||+|||+ ++++|+||+|+||+++. ++.++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~~L~~lH~-~~~~H~dl~p~nil~~~-~~~~~l~df~~~~~~~~ 151 (283)
T cd07835 76 VFEFLDLDLKKYMDSS--PLTGLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLLIDR-EGALKLADFGLARAFGV 151 (283)
T ss_pred EEeccCcCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcC-CCcEEEeecccccccCC
Confidence 9999988877776542 12468999999999999999999999 79999999999999997 88999999999975433
Q ss_pred CCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC--c
Q 018619 167 GEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--P 243 (353)
Q Consensus 167 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 243 (353)
... .....++..|+|||.+.+...++.++|+||+||++|+|++|.+||...+..+....+.+..+.+....+.... +
T Consensus 152 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 152 PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred CccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 221 2233568889999988665557899999999999999999999999988888888888877777655432211 0
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.+. ..++........ .....++.++.++|.+||+.||.+|||+.+++.||||
T Consensus 232 ~~~-~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 232 DYK-PTFPKWARQDLS-KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhh-hhcccccccchh-hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 000 011111111111 1224578899999999999999999999999999998
No 166
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.3e-44 Score=325.09 Aligned_cols=260 Identities=29% Similarity=0.503 Sum_probs=210.9
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|++|.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++.+ .....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 47999999999999999999999999999999886542 2345799999999999999999887 44456
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.|+||||+.+ +|.+.+.. .....+++..++.++.|++.||+|||+ .|++|+||||+||+++. ++.++|+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~ 151 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQR--QPGKCLSEEVARFYAAEVLLALEYLHL-LGIVYRDLKPENILLHE-SGHIMLSDFDLSK 151 (316)
T ss_pred EEEEEEecCCCCHHHHHHh--CCCCccCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChHHeEEcC-CCCEEEeecchhh
Confidence 8999999985 66665542 234679999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCC------------------------------cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCC
Q 018619 163 QLIAGEA------------------------------NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 212 (353)
Q Consensus 163 ~~~~~~~------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~ 212 (353)
....... .....||..|+|||.+.+. .++.++||||+||++|+|++|..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Di~slG~ll~~l~~g~~ 230 (316)
T cd05574 152 QSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD-GHGSAVDWWTLGILLYEMLYGTT 230 (316)
T ss_pred cccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC-CCCchHHHHHHHHHHHHHhhCCC
Confidence 5432211 1123578889999999654 47899999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC----H
Q 018619 213 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT----A 288 (353)
Q Consensus 213 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~ 288 (353)
||.+.+.......+... ...++. ...++.++.++|.+||+.||.+||| +
T Consensus 231 pf~~~~~~~~~~~~~~~-----------------~~~~~~----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~ 283 (316)
T cd05574 231 PFKGSNRDETFSNILKK-----------------EVTFPG----------SPPVSSSARDLIRKLLVKDPSKRLGSKRGA 283 (316)
T ss_pred CCCCCchHHHHHHHhcC-----------------CccCCC----------ccccCHHHHHHHHHHccCCHhHCCCchhhH
Confidence 99888766555444321 000000 0126899999999999999999999 9
Q ss_pred HHHhcCcccccccCCCCCC
Q 018619 289 LEACAHPFFDELREPNARL 307 (353)
Q Consensus 289 ~~~l~hp~f~~~~~~~~~~ 307 (353)
+++++||||++.+++.-..
T Consensus 284 ~~ll~~~~~~~~~~~~~~~ 302 (316)
T cd05574 284 AEIKQHPFFRGVNWALIRH 302 (316)
T ss_pred HHHHcCchhhcCChhhccc
Confidence 9999999999987766555
No 167
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.3e-45 Score=322.42 Aligned_cols=250 Identities=30% Similarity=0.501 Sum_probs=207.8
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|++|.||++.+..+++.||+|.+.+.. ....+|+.+++.++||||+++++++. ....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-----DDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCe
Confidence 47999999999999999999999999999999886432 23457999999999999999999883 3445
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||||++ ++|.+.+.. ...+++..+..++.|++.||+|||+ +|++|+||+|+||+++. ++.+||+|||++.
T Consensus 76 ~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~-~~i~H~dl~p~nili~~-~~~~kl~dfg~~~ 149 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLLDS-DGYIKITDFGFAK 149 (290)
T ss_pred EEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECC-CCCEEEeeCCCcc
Confidence 889999996 566666543 4679999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
..... .....+++.|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.......+... .
T Consensus 150 ~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~---------- 214 (290)
T cd05580 150 RVKGR--TYTLCGTPEYLAPEIILSK-GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--K---------- 214 (290)
T ss_pred ccCCC--CCCCCCCccccChhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--C----------
Confidence 66444 3344678899999998654 4789999999999999999999999887755444433320 0
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCC
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 303 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~ 303 (353)
..++..++..+.++|++||+.||.+|+ +++++++||||+.+.+.
T Consensus 215 -----------------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 263 (290)
T cd05580 215 -----------------VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWI 263 (290)
T ss_pred -----------------ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHH
Confidence 012345689999999999999999999 99999999999887643
No 168
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.4e-45 Score=330.59 Aligned_cols=254 Identities=25% Similarity=0.374 Sum_probs=195.6
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEEC-----CCCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFF 74 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~ 74 (353)
|.+..++|++.+.||+|+||.||+|.+. .+++.||+|++.... ....+|+.++..+ +||||+++++++.
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 4566789999999999999999999753 345789999886432 2345799999999 8999999998774
Q ss_pred ecCCCCceeEEEEecccc-chHHHHHHhhhh-------------------------------------------------
Q 018619 75 STTSKNELFLNLVMEYVP-ESMYRVLKHYSS------------------------------------------------- 104 (353)
Q Consensus 75 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------------------------------------------------- 104 (353)
.. ...++++|||++ |+|.+.+.....
T Consensus 82 ~~----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T cd05102 82 KP----NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGST 157 (338)
T ss_pred CC----CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccc
Confidence 22 224789999998 577666653211
Q ss_pred ---------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc---ce
Q 018619 105 ---------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN---IS 172 (353)
Q Consensus 105 ---------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~ 172 (353)
...++++..+..++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||+++........ ..
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDiKp~Nil~~~-~~~~kl~DfG~a~~~~~~~~~~~~~~ 235 (338)
T cd05102 158 NPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVRKGS 235 (338)
T ss_pred ccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECCCCccceEEEcC-CCcEEEeecccccccccCcchhcccC
Confidence 02358888999999999999999999 79999999999999996 788999999999865332221 12
Q ss_pred eeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCC
Q 018619 173 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 251 (353)
Q Consensus 173 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (353)
..+++.|+|||++.+. .++.++|||||||++|+|++ |..||.+....+...........
T Consensus 236 ~~~~~~y~aPE~~~~~-~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~------------------- 295 (338)
T cd05102 236 ARLPLKWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR------------------- 295 (338)
T ss_pred CCCCccccCcHHhhcC-CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC-------------------
Confidence 3346789999998654 48999999999999999997 99999876544333322221000
Q ss_pred CCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 252 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+...++++.+++.+||+.||.+|||+.++++
T Consensus 296 --------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 296 --------MRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred --------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0012357889999999999999999999999874
No 169
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.6e-44 Score=319.97 Aligned_cols=261 Identities=25% Similarity=0.369 Sum_probs=208.3
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
..++|++.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.+ +||||+++++++..........+
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 5689999999999999999999999999999999875432 3345789999998 69999999998865544455678
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++||||+++ +|.+.+.........+++..++.++.|++.||.|||+ ++++||||||+||+++. ++.+||+|||++..
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~ 173 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV-NKTIHRDVKGNNILLTT-EGGVKLVDFGVSAQ 173 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh-CCccccCCCHHhEEECC-CCCEEEccCCceee
Confidence 899999985 6766666544556779999999999999999999999 79999999999999996 77899999999876
Q ss_pred cccCC-CcceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
..... ......+++.|+|||.+.. ...++.++|+||+||++|+|++|..||...+....+...... .+.
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~--~~~---- 247 (286)
T cd06638 174 LTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PPP---- 247 (286)
T ss_pred cccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--CCC----
Confidence 54332 2234568899999998743 234788999999999999999999999876554333221110 000
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
....+...+.++.+||.+||+.||++|||+.++++||||
T Consensus 248 --------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 248 --------------------TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred --------------------cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 000122357889999999999999999999999999997
No 170
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.3e-44 Score=326.83 Aligned_cols=285 Identities=36% Similarity=0.654 Sum_probs=221.2
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCC-Cc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSK-NE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~ 81 (353)
..++|.+.+.||+|++|.||++.+..+++.||+|++.... ....+|+.+++.++||||+++++++...... ..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999999999999999885421 2345799999999999999999987443221 12
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+++||||+++++...+. ...+++..++.++.|++.||+|||+ .||+||||||+||+++. ++.+||+|||++
T Consensus 93 ~~~~lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~-~gi~H~dlkp~Nill~~-~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAVNE-DCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCCEEEeecccc
Confidence 3468999999877765553 3578999999999999999999999 79999999999999996 788999999999
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... .....+++.|+|||.+.+...++.++|+||+||++|+|++|..||.+.+.......+.+..+.+........
T Consensus 166 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07880 166 RQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKL 243 (343)
T ss_pred cccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 865332 223466889999999866455889999999999999999999999988887777777776655544332222
Q ss_pred CcCCCC-C--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 242 NPNYTD-F--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 242 ~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
...... + ..+......+ ..+...+++++.++|.+||+.||.+|||+.+++.||||+..+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 244 QSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred cchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 111000 0 0111111111 11224578899999999999999999999999999999988654
No 171
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.4e-44 Score=317.94 Aligned_cols=257 Identities=25% Similarity=0.403 Sum_probs=203.7
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHc-CCCceeecceeeeecCCC-CceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVM-DHPNVISLKHCFFSTTSK-NELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~-~~~~~ 84 (353)
.+.|++.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.+ +|||++++++.+...... ....+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 467999999999999999999999999999999886442 3345788889888 799999999988654332 23468
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|++|||+++ +|.+.+.. .....+++..+..++.|++.||+|||+ ++|+|+||||+||+++. ++.++|+|||++..
T Consensus 85 ~iv~e~~~~~~L~~~l~~--~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivh~dl~~~nili~~-~~~~~l~Dfg~~~~ 160 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKN--TKGNTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEcCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHEEECC-CCCEEEccCCCcee
Confidence 899999985 66665543 124568999999999999999999999 79999999999999996 78899999999876
Q ss_pred cccCC-CcceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
..... ......+++.|+|||++.+ ...++.++|+||+||++|+|++|..||............... +
T Consensus 161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~----- 232 (272)
T cd06637 161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---P----- 232 (272)
T ss_pred cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---C-----
Confidence 54322 2234567889999999853 234788999999999999999999999766544333222110 0
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
........++.++.+|+.+||..||.+|||+.+++.||||
T Consensus 233 -------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 233 -------------------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred -------------------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 0000113468899999999999999999999999999998
No 172
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.7e-44 Score=320.81 Aligned_cols=262 Identities=24% Similarity=0.397 Sum_probs=207.4
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
++...+.|++.+.||.|+||.||++++..+++.|++|.+.... ....+|+.+++.++|||++++++++.. .
T Consensus 7 ~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 81 (292)
T cd06644 7 DLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-----D 81 (292)
T ss_pred ccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-----C
Confidence 4455678999999999999999999999999999999986443 234578999999999999999998843 3
Q ss_pred eeEEEEeccccchHH-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPESMY-RVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~-~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
..+|+||||++++.+ ..+.. ....+++..++.++.|++.||.|||+ +|++||||||+||+++. ++.+||+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nili~~-~~~~kl~dfg~ 156 (292)
T cd06644 82 GKLWIMIEFCPGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYLHS-MKIIHRDLKAGNVLLTL-DGDIKLADFGV 156 (292)
T ss_pred CeEEEEEecCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhc-CCeeecCCCcceEEEcC-CCCEEEccCcc
Confidence 358899999997543 33322 34568999999999999999999999 79999999999999986 78899999999
Q ss_pred ccccccCC-CcceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 161 AKQLIAGE-ANISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 161 a~~~~~~~-~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
+....... ......+++.|+|||.+.+ ...++.++|+||+||++|+|++|..||...+......++... .++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--~~~- 233 (292)
T cd06644 157 SAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPP- 233 (292)
T ss_pred ceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC--CCc-
Confidence 87543322 2234567889999999843 234678999999999999999999999877654444333221 000
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
....+..++.++.++|.+||+.||++||+++++++||||..+...
T Consensus 234 -----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 234 -----------------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred -----------------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 000123468899999999999999999999999999999876543
No 173
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.7e-44 Score=319.66 Aligned_cols=277 Identities=31% Similarity=0.605 Sum_probs=217.6
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
|.+.+.||+|++|.||++.+..+++.+|+|.+.... ....+|+.+++.++|||++++++++.... ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 788999999999999999999999999999997542 23457999999999999999999884331 245889
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
||||+++++.+.+.. ....+++..++.++.|++.||+|||+ .|++|+||+|+||+++. ++.+||+|||++.....
T Consensus 78 v~e~~~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~-~~~~h~dl~p~nil~~~-~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 78 VFEYMDHDLTGLLDS---PEVKFTESQIKCYMKQLLEGLQYLHS-NGILHRDIKGSNILINN-DGVLKLADFGLARPYTK 152 (287)
T ss_pred EeccccccHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEEcC-CCCEEEccccceeeccC
Confidence 999999887766653 23579999999999999999999999 79999999999999996 88999999999986654
Q ss_pred CCC--cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 167 GEA--NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 167 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
... .....++..|+|||.+.+...++.++||||+||++|+|++|..||...+.......+.+..+.+....+......
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 431 233456788999998766556889999999999999999999999999988888888877776665443321110
Q ss_pred --CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 245 --YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 245 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.................+....++++.++|++||+.||.+|||+.+++.||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00000000000011112222248899999999999999999999999999997
No 174
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-44 Score=326.38 Aligned_cols=277 Identities=21% Similarity=0.325 Sum_probs=199.0
Q ss_pred EeeeeecC--CCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 15 AERVVGTG--SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 15 ~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
+.++||+| ++++||++.++.+|+.||+|++.... ....+|+.+++.++||||+++++++.. ....|+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-----~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-----DNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----CCEEEE
Confidence 56789999 67899999999999999999986432 234579999999999999999998843 334889
Q ss_pred Eeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 87 VMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 87 v~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
||||+++ ++.+.+... ....+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.++++||+.+....
T Consensus 77 v~e~~~~~~l~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~-~~iiH~dlkp~Nil~~~-~~~~~l~~~~~~~~~~ 152 (327)
T cd08227 77 VTSFMAYGSAKDLICTH--FMDGMSELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISV-DGKVYLSGLRSNLSMI 152 (327)
T ss_pred EEeccCCCcHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCChhhEEEec-CCcEEEcccchhhccc
Confidence 9999984 666665432 23458999999999999999999999 79999999999999996 7889999998754332
Q ss_pred cCCC--------cceeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC----
Q 018619 166 AGEA--------NISYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT---- 232 (353)
Q Consensus 166 ~~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---- 232 (353)
.... .....++..|+|||++.+. ..++.++||||+||++|+|++|..||..................
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (327)
T cd08227 153 NHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 232 (327)
T ss_pred cccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccc
Confidence 2111 1123457779999998653 35889999999999999999999999876554433332221000
Q ss_pred ---CCHHHHhhcCcCCCCC--cCCC---------CCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 233 ---PTREEIRCMNPNYTDF--RFPQ---------IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 233 ---~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
.+.+.+. +.+..... .... .........+...+++++.+||++||+.||++|||++++++||||+
T Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~ 311 (327)
T cd08227 233 TTTIPAEELT-MKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311 (327)
T ss_pred ccchhhhhcc-cCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence 0000000 00000000 0000 0000000112234678999999999999999999999999999998
Q ss_pred ccc
Q 018619 299 ELR 301 (353)
Q Consensus 299 ~~~ 301 (353)
++.
T Consensus 312 ~~~ 314 (327)
T cd08227 312 QIK 314 (327)
T ss_pred hcc
Confidence 764
No 175
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.3e-44 Score=319.02 Aligned_cols=283 Identities=30% Similarity=0.526 Sum_probs=220.5
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC----
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS---- 78 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 78 (353)
..++|.+.+.||+|++|.||++.++.+|+.||+|.+.... ....+|+.+++.++|||++++++++....+
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4578999999999999999999999999999999885432 233579999999999999999988754331
Q ss_pred -CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 79 -KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 79 -~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
.+...+++|+||+++++...+.. ....+++..++.++.|++.||+|||+ +||+|+||||+||+++. ++.+||+|
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~-~~~~kl~d 159 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHK-KNFLHRDIKCSNILLNN-KGQIKLAD 159 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCcEEeCc
Confidence 12236889999999987766553 24578999999999999999999999 79999999999999996 78899999
Q ss_pred eccccccccCCC--cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 158 FGSAKQLIAGEA--NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 158 fg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
||++........ .....++..|+|||.+.+...++.++||||+||++|+|++|++||...+..+.+..+.+..+.+..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 999986544331 122345778999999866555789999999999999999999999988888888888887776665
Q ss_pred HHHhhcCc--CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 236 EEIRCMNP--NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 236 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..+..... .+............+...+ ..++..+.++|.+||+.||++|||+.+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 44322110 0100000011111122222 3478999999999999999999999999999997
No 176
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-44 Score=320.37 Aligned_cols=260 Identities=26% Similarity=0.441 Sum_probs=204.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
++|++.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++||||+++++.+. .....|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-----IEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-----cCCeEE
Confidence 47899999999999999999999999999999886431 23457999999999999999999873 344588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|...+.. ......+++..+..++.|++.||.|||+..+++|+||||+||+++. ++.+||+|||++...
T Consensus 76 lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~ 153 (286)
T cd06622 76 MCMEYMDAGSLDKLYAG-GVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG-NGQVKLCDFGVSGNL 153 (286)
T ss_pred EEEeecCCCCHHHHHHh-ccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC-CCCEEEeecCCcccc
Confidence 99999996 55444432 1123479999999999999999999996249999999999999996 788999999998755
Q ss_pred ccCCCcceeeeeceeeChhhhhCCC-----CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGEANISYICSRFYRAPELIFGAT-----EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
... ......+++.|+|||.+.+.. .++.++|+||+||++|+|++|..||...+.......+........
T Consensus 154 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----- 227 (286)
T cd06622 154 VAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP----- 227 (286)
T ss_pred cCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC-----
Confidence 332 223345788899999985432 257899999999999999999999977654443333222111100
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
..++..+++++.+||.+||+.||.+||+++++++||||...+..
T Consensus 228 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 228 --------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred --------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 01223478999999999999999999999999999999886544
No 177
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=333.25 Aligned_cols=257 Identities=30% Similarity=0.428 Sum_probs=221.2
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
...+.|.+.+.||+|.|++|.++++..|+..||||.+.+.. ....+|+++|+.++|||||+++.+. ...
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t~ 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ETE 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----eec
Confidence 45678999999999999999999999999999999997653 2245899999999999999999998 444
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+|+||||+.++ .+..|...++++.+..++.++.|++.|++|||+ ++|+|||||++|||++. +.++||+|||++
T Consensus 128 ~~lylV~eya~~g---e~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~-k~ivHrdLk~eNilL~~-~mnikIaDfgfS 202 (596)
T KOG0586|consen 128 ATLYLVMEYASGG---ELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHS-KNIVHRDLKAENILLDE-NMNIKIADFGFS 202 (596)
T ss_pred ceeEEEEEeccCc---hhHHHHHhcccchhhhhhhhhHHHHHHHHHHhh-cceeccccchhhccccc-ccceeeeccccc
Confidence 4499999999964 444555678999999999999999999999999 89999999999999996 778999999999
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
..+..+....+++|++.|.|||++.|..+.++.+|+||+|+++|.|+.|.+||.+.+-.+.-...+.
T Consensus 203 ~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~------------- 269 (596)
T KOG0586|consen 203 TFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR------------- 269 (596)
T ss_pred eeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee-------------
Confidence 9998888888999999999999999988789999999999999999999999988764433222111
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
..+ .++-.++.++.++|+++|-.+|.+|++++++..|.|.......
T Consensus 270 ----gk~------------rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 270 ----GKY------------RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred ----eee------------cccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 001 1223589999999999999999999999999999999876554
No 178
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.2e-44 Score=315.80 Aligned_cols=260 Identities=28% Similarity=0.424 Sum_probs=208.4
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHc-CCCceeecceeeeecCC-CCceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVM-DHPNVISLKHCFFSTTS-KNELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~-~~~~~~ 84 (353)
.++|++.+.||+|++|.||+|.++.+++.|++|.+.... ..+.+|+.+++.+ +|+||+++++++..... .....+
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 589999999999999999999999999999999886543 3456799999998 79999999998865443 345568
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|+||||+++ +|.+.+......+..+++..++.++.|++.||+|||+ +|++|+||+|+||+++. ++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~~l~p~ni~~~~-~~~~~l~d~~~~~~ 162 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE-NKVIHRDIKGQNILLTK-NAEVKLVDFGVSAQ 162 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEEcc-CCeEEECCCcccee
Confidence 899999995 6666665544446789999999999999999999999 79999999999999996 78899999999876
Q ss_pred cccCCC-cceeeeeceeeChhhhhCC----CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 164 LIAGEA-NISYICSRFYRAPELIFGA----TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 164 ~~~~~~-~~~~~~t~~y~aPE~~~~~----~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
...... .....++..|+|||.+... ..++.++||||+||++|+|++|..||...+......++.... .
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~---- 235 (275)
T cd06608 163 LDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP---P---- 235 (275)
T ss_pred cccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC---C----
Confidence 543222 2345678899999987432 346788999999999999999999998765554444332210 0
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+.. ..+...+.++.+||++||..||++|||+.++++|||+
T Consensus 236 ------------~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 236 ------------PTL-------KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ------------CCC-------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 000 0012367899999999999999999999999999996
No 179
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.6e-44 Score=322.25 Aligned_cols=283 Identities=38% Similarity=0.710 Sum_probs=222.9
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
...++|.+.+.||.|+||.||+|.+..+++.||+|++.+. .....+|+.+++.++||||+++.++|... .
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----~ 82 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP----L 82 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC----C
Confidence 4578999999999999999999999999999999987532 23445799999999999999999887432 2
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
...|+++||+++++...+. ..++++..+..++.|++.||+|||+ +|++|+||+|+||+++. ++.++|+|||.+
T Consensus 83 ~~~~lv~e~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~-~~iiH~dl~p~Nili~~-~~~~~l~dfg~~ 155 (328)
T cd07856 83 EDIYFVTELLGTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILINE-NCDLKICDFGLA 155 (328)
T ss_pred CcEEEEeehhccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEeECC-CCCEEeCccccc
Confidence 2478999999888766654 3568889999999999999999999 79999999999999996 788999999998
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
..... ......++..|+|||.+.+...++.++|+||+||++|+|++|.+||...+.......+.+.++.++.+.....
T Consensus 156 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 156 RIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred cccCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 75432 2234567888999998766456899999999999999999999999998887777777887787765544321
Q ss_pred CcC-CCCC--cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCCC
Q 018619 242 NPN-YTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 304 (353)
Q Consensus 242 ~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~~ 304 (353)
... ..++ ..+.....++...+ ..++.++.++|++||+.||++|||+++++.||||...+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~ 298 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKF-KNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPT 298 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHc-CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCc
Confidence 110 0000 01111111111212 34788999999999999999999999999999998876553
No 180
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-45 Score=343.64 Aligned_cols=252 Identities=26% Similarity=0.413 Sum_probs=202.5
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcC-CCceeeccee-eeecCCCC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMD-HPNVISLKHC-FFSTTSKN 80 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~-h~~iv~~~~~-~~~~~~~~ 80 (353)
.+...+++|.++|.+|||+.||+|.+...|..||+|++.... ....+|+++|+.|+ |+|||.+++. .......+
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 356678899999999999999999999888999999885332 34468999999996 9999999994 33332333
Q ss_pred -ceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCC--eeeccCCCCcEEEeCCCCcEEEe
Q 018619 81 -ELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPR--VCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 81 -~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~--i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
...+.|+||||. |+|.+.|..+.. .+|++.++.+|++++++|+.+||. .. |||||||-+||||+. ++..|||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~-~g~~KLC 188 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSA-DGNYKLC 188 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcC-CCCEEeC
Confidence 355789999999 699999987654 349999999999999999999999 47 999999999999996 7889999
Q ss_pred eeccccccccCCCc----------ceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHH
Q 018619 157 DFGSAKQLIAGEAN----------ISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLV 224 (353)
Q Consensus 157 Dfg~a~~~~~~~~~----------~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 224 (353)
|||.|......... .....|+.|+|||++.- ....+.++|||+|||+||.|+....||.......++.
T Consensus 189 DFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIln 268 (738)
T KOG1989|consen 189 DFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILN 268 (738)
T ss_pred cccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEe
Confidence 99998744332211 12356999999999732 3457999999999999999999999998765432221
Q ss_pred HHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 225 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..|.+|.. .+.+..+++||+.||+.||.+||++.|++.
T Consensus 269 ---------------------g~Y~~P~~----------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~ 306 (738)
T KOG1989|consen 269 ---------------------GNYSFPPF----------PNYSDRLKDLIRTMLQPNPDERPNIYQVLE 306 (738)
T ss_pred ---------------------ccccCCCC----------ccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 22333321 257899999999999999999999999873
No 181
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-43 Score=309.44 Aligned_cols=249 Identities=27% Similarity=0.448 Sum_probs=202.3
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.|++.+.||.|++|.||++.+..+++.||+|.+..+. ....+|+.+++.++|+|++++++.+. .....+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 5899999999999999999999999999999985432 23457899999999999999887662 1233578
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++|||+++ ++.+.+.. .....+++.+++.++.|++.|+++||+ +|++|+||||+||+++. ++.++|+|||++...
T Consensus 77 lv~e~~~~~~l~~~l~~--~~~~~l~~~~~~~~~~~l~~~l~~lH~-~~i~H~di~p~nil~~~-~~~~~l~df~~~~~~ 152 (257)
T cd08223 77 IVMGFCEGGDLYHKLKE--QKGKLLPENQVVEWFVQIAMALQYLHE-KHILHRDLKTQNVFLTR-TNIIKVGDLGIARVL 152 (257)
T ss_pred EEecccCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCchhEEEec-CCcEEEecccceEEe
Confidence 99999985 66666553 134568999999999999999999999 79999999999999996 788999999999865
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..... .....+++.|+|||++.+. .++.++|+||+||++++|++|+.||...+.......+.....
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~------------ 219 (257)
T cd08223 153 ENQCDMASTLIGTPYYMSPELFSNK-PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL------------ 219 (257)
T ss_pred cccCCccccccCCcCccChhHhcCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC------------
Confidence 43322 2334678899999998654 588999999999999999999999987776555444333100
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+ ..+..+++++.+++.+||+.||.+|||+.+++.||||
T Consensus 220 -------~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 -------P---------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred -------C---------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0 0123478899999999999999999999999999997
No 182
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.5e-44 Score=316.53 Aligned_cols=275 Identities=40% Similarity=0.699 Sum_probs=220.6
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-----chHHHHHHHHHcC-CCceeecceeeeecCCCCceeEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRVMD-HPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
|.+.+.||+|++|.||+|....+++.|+||.+..... ...+|+..++.++ |||++++++++.. ....++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEEE
Confidence 7889999999999999999988999999998865322 2346889999999 9999999998843 445889
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
||||+++++.+.+... ....+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~dl~~~ni~i~~-~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 76 VFEYMEGNLYQLMKDR--KGKPFSESVIRSIIYQILQGLAHIHK-HGFFHRDLKPENLLVSG-PEVVKIADFGLAREIRS 151 (283)
T ss_pred EEecCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcC-CCCEEEeecccceeccC
Confidence 9999988887777542 13578999999999999999999999 79999999999999996 88899999999987655
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC--
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN-- 244 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 244 (353)
........++..|+|||.+.+...++.++|+||+|+++++|++|.+||...+..+.+.++...++.+....+......
T Consensus 152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 544455677889999998866556889999999999999999999999999988889888888888776543321111
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.....++..........+ ...+.++.++|++||+.||++|||+.|++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLI-PNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccccccHHHHc-ccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 111111211111111112 2347899999999999999999999999999997
No 183
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=337.51 Aligned_cols=256 Identities=23% Similarity=0.386 Sum_probs=211.3
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.+.|.|+..||.|+||+||+|.++.++-.-|.|.+.... ....-|+.||...+||+||++++.||.... ++
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enk-----Lw 105 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENK-----LW 105 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCc-----eE
Confidence 356789999999999999999999888888888774332 223368999999999999999999865544 89
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
|+.|||+|+--+.+.- .-+..+++.+++.+.+|+|.||.|||+ ++|||||||..|||+.. +|.++|+|||.+....
T Consensus 106 iliEFC~GGAVDaiml--EL~r~LtE~QIqvvc~q~ldALn~LHs-~~iIHRDLKAGNiL~Tl-dGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIML--ELGRVLTEDQIQVVCYQVLDALNWLHS-QNIIHRDLKAGNILLTL-DGDIRLADFGVSAKNK 181 (1187)
T ss_pred EEEeecCCchHhHHHH--HhccccchHHHHHHHHHHHHHHHHHhh-cchhhhhccccceEEEe-cCcEeeecccccccch
Confidence 9999999764443332 346789999999999999999999999 79999999999999996 8889999999876433
Q ss_pred c-CCCcceeeeeceeeChhhhh----CCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 166 A-GEANISYICSRFYRAPELIF----GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 166 ~-~~~~~~~~~t~~y~aPE~~~----~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
. .....+++|||+|||||+.. ...+|.+++||||||++|.+|..+.+|-...+....+.++.+. .|+.
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS--ePPT----- 254 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPT----- 254 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc--CCCc-----
Confidence 2 23345789999999999973 3567999999999999999999999999999988888777662 1110
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
..+ +...+..+.||+.+||.+||..||+++++|.||||.+.
T Consensus 255 -----------Llq--------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 255 -----------LLQ--------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred -----------ccC--------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 011 23457789999999999999999999999999999864
No 184
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-45 Score=307.52 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=201.3
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEecc
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVMEY 90 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 90 (353)
.+.||+|+|+.|--+....||..||||++.+.. ....+|++++..- .|+||+++++.| +++..+|+|||-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF-----Edd~~FYLVfEK 157 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF-----EDDTRFYLVFEK 157 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh-----cccceEEEEEec
Confidence 358999999999999999999999999997753 4455899988877 599999999999 666779999999
Q ss_pred ccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCC--cEEEeeeccccccccC
Q 018619 91 VPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH--QVKICDFGSAKQLIAG 167 (353)
Q Consensus 91 ~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~--~vkl~Dfg~a~~~~~~ 167 (353)
+.|+ ++.- +.....+++.++.++...|+.||.|||. +||.||||||+|||-...+. -||||||.+...+...
T Consensus 158 m~GGplLsh----I~~~~~F~E~EAs~vvkdia~aLdFlH~-kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~ 232 (463)
T KOG0607|consen 158 MRGGPLLSH----IQKRKHFNEREASRVVKDIASALDFLHT-KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN 232 (463)
T ss_pred ccCchHHHH----HHHhhhccHHHHHHHHHHHHHHHHHHhh-cCcccccCCccceeecCCCCcCceeeeccccccccccC
Confidence 9964 4433 3456789999999999999999999999 89999999999999864332 4999999987643221
Q ss_pred --------CCcceeeeeceeeChhhhh----CCCCCCccccchhHHHHHHHHHhCCCCCCCCCh---------------H
Q 018619 168 --------EANISYICSRFYRAPELIF----GATEYTTSIDIWSAGCVLAELLLGQPLFPGENA---------------V 220 (353)
Q Consensus 168 --------~~~~~~~~t~~y~aPE~~~----~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---------------~ 220 (353)
....+.+|+..|||||+.. ....|..++|.||||||+|-|++|.+||.+.=. .
T Consensus 233 ~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~ 312 (463)
T KOG0607|consen 233 NDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 312 (463)
T ss_pred CCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHH
Confidence 1234567888999999962 234689999999999999999999999976311 1
Q ss_pred HHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 221 DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.....|.+ +.++|| ...| ..+|.+++|+|+.+|..|+.+|.++.++++|||++..
T Consensus 313 ~LFesIQE-----------------GkYeFP---dkdW-----ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~ 367 (463)
T KOG0607|consen 313 KLFESIQE-----------------GKYEFP---DKDW-----AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRC 367 (463)
T ss_pred HHHHHHhc-----------------cCCcCC---hhhh-----HHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccccc
Confidence 12222222 223333 2344 3489999999999999999999999999999999987
Q ss_pred cCC
Q 018619 301 REP 303 (353)
Q Consensus 301 ~~~ 303 (353)
...
T Consensus 368 ~~e 370 (463)
T KOG0607|consen 368 APE 370 (463)
T ss_pred chh
Confidence 544
No 185
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=332.17 Aligned_cols=246 Identities=30% Similarity=0.452 Sum_probs=203.6
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHH-cCCCceeecceeeeecCCCCceeEEEE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRV-MDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
..+.|.+...+|.|+|+.|..+.+..+++.+++|++.+......+|+.++.. -+||||+++.+++ .+....|+|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~~~v 394 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEIYLV 394 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeeccee-----cCCceeeee
Confidence 4678999999999999999999999999999999998887777788865554 4799999999998 666779999
Q ss_pred eccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 88 MEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 88 ~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||.+.|.. .+.. +.....+. ..+..|++||+.|+.|||+ +|++||||||+|||++.+.+.++|+|||.++.....
T Consensus 395 ~e~l~g~e--ll~r-i~~~~~~~-~e~~~w~~~lv~Av~~LH~-~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 395 MELLDGGE--LLRR-IRSKPEFC-SEASQWAAELVSAVDYLHE-QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred ehhccccH--HHHH-HHhcchhH-HHHHHHHHHHHHHHHHHHh-cCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999752 2221 22223333 7888899999999999999 799999999999999534788999999999866544
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
..+.+-|..|.|||++. ...|+.++|+||||++||+|++|+.||...... ..+...++.+.
T Consensus 470 --~~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~------------- 530 (612)
T KOG0603|consen 470 --CDTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPK------------- 530 (612)
T ss_pred --hcccchhhcccChhhhc-cCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCc-------------
Confidence 33445688899999996 566999999999999999999999999877766 33334333332
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
+...+|.+++|||++||+.||.+|+++++++.||||
T Consensus 531 --------------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 531 --------------FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred --------------cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 114589999999999999999999999999999999
No 186
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=331.39 Aligned_cols=248 Identities=30% Similarity=0.462 Sum_probs=211.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.|.-.+.||.|+||.||.|++..+.+.||||++.-.. ..+.+|+..|+.++|||++.+.+||....+ .
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~T-----a 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHT-----A 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccch-----H
Confidence 3556788999999999999999999999999995332 233489999999999999999999954443 8
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
|+|||||-|+-.+++.-+ ..++.+.++..|..+.+.||+|||+ .+.||||||..|||++. .+.|||+|||.|...
T Consensus 102 WLVMEYClGSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS-~~~IHRDiKAGNILLse-~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 102 WLVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHS-HNRIHRDIKAGNILLSE-PGLVKLADFGSASIM 176 (948)
T ss_pred HHHHHHHhccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHH-hhHHhhhccccceEecC-CCeeeeccccchhhc
Confidence 899999999777776653 4679999999999999999999999 79999999999999995 899999999999765
Q ss_pred ccCCCcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 165 IAGEANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.+ ..+++|||+|||||++.. .+.|+-++||||||++..||...++|.-..+....++.|.+.-
T Consensus 177 ~P---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe------------ 241 (948)
T KOG0577|consen 177 AP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE------------ 241 (948)
T ss_pred Cc---hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC------------
Confidence 43 346899999999999843 3458999999999999999999999999999998888887631
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
-|.++... .|..++.||..||++-|.+|||.+++|.|+|+..
T Consensus 242 -------sPtLqs~e--------WS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 242 -------SPTLQSNE--------WSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred -------CCCCCCch--------hHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 12233333 4778999999999999999999999999999865
No 187
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.2e-44 Score=317.08 Aligned_cols=250 Identities=27% Similarity=0.413 Sum_probs=205.4
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
++|++.+.||.|++|.||++.+..+++.||+|.+.... ....+|+.+++.++|+|++++++.+.. ...+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-----GSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-----CCeEE
Confidence 47999999999999999999999999999999886432 234579999999999999999998743 34589
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+|+||+.+ +|.+.+.. .++++..++.++.|++.||.|||+ ++++|+||+|+||++++ ++.++|+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~ 148 (274)
T cd06609 76 IIMEYCGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHE-EGKIHRDIKAANILLSE-EGDVKLADFGVSGQL 148 (274)
T ss_pred EEEEeeCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECC-CCCEEEcccccceee
Confidence 99999985 56555542 378999999999999999999999 79999999999999996 888999999999876
Q ss_pred ccC-CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAG-EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
... .......+++.|+|||.+.+.. ++.++||||+||++|+|++|..||...+.......+....
T Consensus 149 ~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~------------- 214 (274)
T cd06609 149 TSTMSKRNTFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN------------- 214 (274)
T ss_pred cccccccccccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC-------------
Confidence 544 2233456788899999986654 8999999999999999999999998766544433322210
Q ss_pred CCCCCcCCCCCCCccccccCCC-CChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
...+... +++++.+++.+||..||++|||++++++||||++..
T Consensus 215 ---------------~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~ 258 (274)
T cd06609 215 ---------------PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAK 258 (274)
T ss_pred ---------------CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCC
Confidence 0001122 688999999999999999999999999999998754
No 188
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.7e-44 Score=318.69 Aligned_cols=252 Identities=25% Similarity=0.461 Sum_probs=198.5
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
++|++.+.||+|++|.||++.+..+++.||+|.+..+. ..+.+|+.+++.++||||+++++.+.. ....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEE
Confidence 46889999999999999999999999999999886442 234579999999999999999998843 33478
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+||||++++.+... ..+++..+..++.|++.||.|||+ +||+|+||||+||+++. ++.++|+|||++....
T Consensus 76 lv~e~~~~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nill~~-~~~~~l~dfg~~~~~~ 146 (279)
T cd06619 76 ICTEFMDGGSLDVY-------RKIPEHVLGRIAVAVVKGLTYLWS-LKILHRDVKPSNMLVNT-RGQVKLCDFGVSTQLV 146 (279)
T ss_pred EEEecCCCCChHHh-------hcCCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCCHHHEEECC-CCCEEEeeCCcceecc
Confidence 99999997543322 357888999999999999999999 79999999999999996 7889999999997654
Q ss_pred cCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHHHHhhcC
Q 018619 166 AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ---LVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 166 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 242 (353)
.. ......+|..|+|||.+.+. .++.++|+||+||++|+|++|..||........ .....+....+..
T Consensus 147 ~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------- 217 (279)
T cd06619 147 NS-IAKTYVGTNAYMAPERISGE-QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP------- 217 (279)
T ss_pred cc-cccCCCCChhhcCceeecCC-CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC-------
Confidence 32 22345788999999998654 489999999999999999999999965332111 0011111000000
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
+ .......++++.++|.+||+.||.+||+++++++||||....
T Consensus 218 --------~--------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 218 --------P--------VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred --------C--------CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 0 001124688999999999999999999999999999998763
No 189
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.7e-44 Score=317.46 Aligned_cols=255 Identities=26% Similarity=0.404 Sum_probs=205.3
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.++|.+.+.||.|++|.||++.+..+++.||+|.+.... ....+|+.+++.++|||++++++.+. .....|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEE
Confidence 468999999999999999999998899999999885432 23457999999999999999999884 334588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+.. ....+++..++.++.|++.||.|||+ +||+|+||||+||+++. ++.++|+|||++...
T Consensus 79 lv~e~~~~~~L~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~nili~~-~~~~~l~d~g~~~~~ 153 (280)
T cd06611 79 ILIEFCDGGALDSIMLE---LERGLTEPQIRYVCRQMLEALNFLHS-HKVIHRDLKAGNILLTL-DGDVKLADFGVSAKN 153 (280)
T ss_pred EEeeccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEECC-CCCEEEccCccchhh
Confidence 99999996 55554433 34579999999999999999999999 79999999999999996 788999999998754
Q ss_pred ccCC-CcceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGE-ANISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
.... ......+++.|+|||.+.. ...++.++|+||+||++|+|++|..||...+.......+... .+
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~------ 225 (280)
T cd06611 154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EP------ 225 (280)
T ss_pred cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC--CC------
Confidence 3322 2234567899999999742 234678999999999999999999999887665544333221 00
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
+. ...+..++.++.++|.+||+.||.+|||+.++++||||.+.
T Consensus 226 -----------~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 226 -----------PT-------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred -----------CC-------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 00 00123478899999999999999999999999999999875
No 190
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.6e-43 Score=313.56 Aligned_cols=278 Identities=36% Similarity=0.627 Sum_probs=216.5
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHc---CCCceeecceeeeecCCCCcee
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVM---DHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
|.+.+.||+|++|.||++++..+++.||+|.+.... ....+|+.+++.+ +|||++++++++..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 788999999999999999998889999999886321 1234677777665 5999999999987655444556
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++++|||+++++.+.+... ....+++..++.++.|++.||+|||+ ++++|+||+|+||+++. ++.+||+|||++..
T Consensus 81 ~~l~~e~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~i~~al~~LH~-~~i~h~~l~~~nili~~-~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKC--PKPGLPPETIKDLMRQLLRGVDFLHS-HRIVHRDLKPQNILVTS-DGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcccCHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhEEEcc-CCCEEEeccCccee
Confidence 8899999998877766542 22468999999999999999999999 79999999999999997 68999999999987
Q ss_pred cccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 164 LIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...........++..|+|||.+.+. .++.++|+||+||++|+|++|.+||......+.+.++....+.+....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (287)
T cd07838 157 YSFEMALTSVVVTLWYRAPEVLLQS-SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV- 234 (287)
T ss_pred ccCCcccccccccccccChHHhccC-CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc-
Confidence 6555444445678889999998664 48899999999999999999999999998888888887766554433221110
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
......++......+ ......+++.+.++|.+||+.||.+||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 235 SLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 000001111111112 11223467899999999999999999999999999997
No 191
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=7.5e-44 Score=314.81 Aligned_cols=274 Identities=39% Similarity=0.706 Sum_probs=223.0
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
|++.+.||+|++|.||++++..+++.||+|.+.... ....+|+.+++.++|+|++++++++. .....++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 678899999999999999999999999999886532 23347999999999999999999883 3345889
Q ss_pred EeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 87 VMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 87 v~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
||||++++|.+.+... ...+++..+..++.|++.||++||+ +|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~~l~~~ni~~~~-~~~~~l~d~g~~~~~~~ 150 (282)
T cd07829 76 VFEYCDMDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHS-HRILHRDLKPQNILINR-DGVLKLADFGLARAFGI 150 (282)
T ss_pred EecCcCcCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChheEEEcC-CCCEEEecCCcccccCC
Confidence 9999999888777642 2579999999999999999999999 79999999999999996 78899999999986544
Q ss_pred CC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCC
Q 018619 167 GE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 245 (353)
Q Consensus 167 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
.. ......++..|+|||.+.+...++.++|+||+||++|+|++|.+||...+..+.+..+.+..+.+....+.......
T Consensus 151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 151 PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred CccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence 33 22234557789999998766568999999999999999999999999999888888888888888776654332221
Q ss_pred -CCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 246 -TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
....++......+...++ .++.++.++|++||+.||++||++.++++||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 231 DYKPTFPKFPPKDLEKVLP-RLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccccccCccchHHhcc-cccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 122233333333333333 358899999999999999999999999999998
No 192
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.9e-44 Score=319.74 Aligned_cols=266 Identities=24% Similarity=0.364 Sum_probs=205.4
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcC-CCceeecceeeeecCCCCce
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMD-HPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 82 (353)
..++|...+.||+|+||.||++.+..+++.||+|.+.... ....+|+.++.++. ||||+++++++.. ..
T Consensus 2 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-----~~ 76 (288)
T cd06616 2 TAEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-----EG 76 (288)
T ss_pred cHHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-----CC
Confidence 3457788899999999999999999999999999886432 23457888888886 9999999998743 23
Q ss_pred eEEEEeccccchHHHHHHh-hhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPESMYRVLKH-YSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~-~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+++|||+..++...... .......+++..+..++.|++.||+|||+..+++||||||+||+++. ++.+||+|||++
T Consensus 77 ~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~ 155 (288)
T cd06616 77 DCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR-NGNIKLCDFGIS 155 (288)
T ss_pred cEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc-CCcEEEeecchh
Confidence 4779999998765544332 12234679999999999999999999997249999999999999996 788999999999
Q ss_pred cccccCCCcceeeeeceeeChhhhhCC--CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGA--TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
.............+++.|+|||.+.+. ..++.++||||+||++|+|++|+.||..... ....+.+......
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~----- 228 (288)
T cd06616 156 GQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDP----- 228 (288)
T ss_pred HHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCC-----
Confidence 765544444445678899999998665 3588999999999999999999999976542 2222222111000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
+.. .......++.++.+||.+||+.||++|||+++++.||||+.....
T Consensus 229 -----------~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~ 276 (288)
T cd06616 229 -----------PIL-----SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEER 276 (288)
T ss_pred -----------CcC-----CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhc
Confidence 000 001113478999999999999999999999999999999875543
No 193
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=5.7e-44 Score=312.95 Aligned_cols=256 Identities=28% Similarity=0.417 Sum_probs=204.8
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
++|++.+.||.|++|+||++.+..++..+|+|++.... ....+|+.+++.++|+|++++++.+. .....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence 47999999999999999999998899999999886432 33457999999999999999998873 334588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++||++.+ ++.+.+... .....+++..++.++.|++.||++||+ +|++|+||+|+||++++ ++.++|+|||++...
T Consensus 76 iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~ql~~al~~lh~-~~i~h~~l~p~ni~~~~-~~~~~l~df~~~~~~ 152 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSS-YPRGGLDEAIIATVLKEVLKGLEYLHS-NGQIHRDIKAGNILLGE-DGSVKIADFGVSASL 152 (267)
T ss_pred EEEeccCCCcHHHHHHHh-cccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcC-CCCEEEcccchHHHh
Confidence 99999985 555555431 123568999999999999999999999 79999999999999996 788999999998766
Q ss_pred ccCCCc-----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGEAN-----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
...... ....++..|+|||.+.....++.++|+||+||++|+|++|+.||...+......+.... ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~---- 225 (267)
T cd06610 153 ADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPP---- 225 (267)
T ss_pred ccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCC----
Confidence 544322 33467889999999866546899999999999999999999999877665544443321 000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
. ++. ......+++++.+++.+||+.||++|||+.+++.||||
T Consensus 226 ----~-----~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 226 ----S-----LET-------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ----C-----cCC-------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0 000 00013578999999999999999999999999999998
No 194
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-47 Score=315.97 Aligned_cols=252 Identities=29% Similarity=0.459 Sum_probs=209.4
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+-|.++..||+|+||.||+|.|+.+|..+|||+++-+. ..+.+|+.++++.+.|++|++|+.|+...+ +++||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD-----LWIVM 107 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD-----LWIVM 107 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCc-----eEeeh
Confidence 35678899999999999999999999999999997543 455689999999999999999999965554 99999
Q ss_pred cccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
|||+ |+..+.+.. .+.++++.++..++..-+.||+|||.+ .-+|||||..|||++. +|..||+|||.|..+.+.
T Consensus 108 EYCGAGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT-~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 108 EYCGAGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNT-DGIAKLADFGVAGQLTDT 182 (502)
T ss_pred hhcCCCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcc-cchhhhhhccccchhhhh
Confidence 9999 677777664 568899999999999999999999995 7889999999999997 888999999999865443
Q ss_pred -CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 -EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
....+..|||.|||||++..- .|...+||||||++..||..|++||.+-.+...+..| |+.
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EI-GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI------PT~----------- 244 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEI-GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI------PTK----------- 244 (502)
T ss_pred HHhhCccccCcccccHHHHHHh-ccchhhhHhhhcchhhhhhcCCCCcccccccceeEec------cCC-----------
Confidence 334567899999999999654 4999999999999999999999999876654332211 110
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
+...+.. +...|.++.|||++||-+.|++|.|+.++++|||+++
T Consensus 245 -------PPPTF~K--PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fikn 288 (502)
T KOG0574|consen 245 -------PPPTFKK--PEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKN 288 (502)
T ss_pred -------CCCCCCC--hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcC
Confidence 0000100 1235889999999999999999999999999999976
No 195
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7e-44 Score=319.11 Aligned_cols=277 Identities=25% Similarity=0.399 Sum_probs=203.2
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
++|++.+.||+|+||.||++.+..++..||+|.+.... ....+|+++++.++||||+++++++. ....+|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence 47999999999999999999999999999999885431 23457999999999999999999884 334588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+. ....+++..+..++.|++.||.|||+..+++|+||||+||+++. ++.+||+|||++...
T Consensus 76 lv~ey~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~ 150 (308)
T cd06615 76 ICMEHMDGGSLDQVLK----KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQL 150 (308)
T ss_pred EEeeccCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec-CCcEEEccCCCcccc
Confidence 99999985 6655554 34678999999999999999999997248999999999999996 788999999998755
Q ss_pred ccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 165 IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
.... .....+++.|+|||.+.+. .++.++|+||+||++|+|++|..||...+..... ....................
T Consensus 151 ~~~~-~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 151 IDSM-ANSFVGTRSYMSPERLQGT-HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred cccc-cccCCCCcCccChhHhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCccccc
Confidence 3322 2345678999999998654 4889999999999999999999999776543322 21111000000000000000
Q ss_pred CCCCcCCC----------CCCCccccccC-CCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 245 YTDFRFPQ----------IKAHPWHKVFH-KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 245 ~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
......+. ...... ..++ ..++.++.+|+.+||+.||++|||+.++++||||.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 294 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNEPP-PKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE 294 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcCCC-ccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence 00000000 000000 0011 13678899999999999999999999999999998753
No 196
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-45 Score=333.64 Aligned_cols=248 Identities=29% Similarity=0.496 Sum_probs=204.6
Q ss_pred eeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccccc
Q 018619 18 VVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE 93 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~ 93 (353)
+||.|.||+||-+++..|....|||.++... .-...|+.+.+.|+|.|||++.+++ ..+.++-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCCC
Confidence 8999999999999999999999999886432 3346899999999999999999887 444567799999996
Q ss_pred -hHHHHHHhhhhcCCCC--CHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc
Q 018619 94 -SMYRVLKHYSSANQRM--PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN 170 (353)
Q Consensus 94 -~l~~~l~~~~~~~~~l--~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~ 170 (353)
+|..++.. .=+++ .+..+..+..||++||+|||+ +.|||||||-+|+||+...|.+||+|||.++....-...
T Consensus 657 GSLSsLLrs---kWGPlKDNEstm~fYtkQILeGLkYLHe-n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 657 GSLSSLLRS---KWGPLKDNESTMNFYTKQILEGLKYLHE-NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred CcHHHHHHh---ccCCCccchhHHHHHHHHHHHHhhhhhh-cceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence 55555543 23556 889999999999999999999 799999999999999998999999999999987665443
Q ss_pred -ceeeeeceeeChhhhhC-CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCC
Q 018619 171 -ISYICSRFYRAPELIFG-ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 248 (353)
Q Consensus 171 -~~~~~t~~y~aPE~~~~-~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
.+..||..|||||++.. ...|+.++|||||||++.||.||++||......... +.+. |..
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--MFkV-Gmy--------------- 794 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--MFKV-GMY--------------- 794 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--hhhh-cce---------------
Confidence 45789999999999954 356999999999999999999999999765543222 2221 000
Q ss_pred cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 249 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.-+..++..+|.+++.||.+|+..||.+||+|.++|..||++.-
T Consensus 795 --------KvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 795 --------KVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred --------ecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 01223456789999999999999999999999999999999864
No 197
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5.3e-44 Score=313.28 Aligned_cols=250 Identities=30% Similarity=0.501 Sum_probs=199.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---------cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
.+|.+.+.||+|+||.||+|.+..++..||+|++.... ....+|+.+++.++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 57999999999999999999999999999999885321 2345799999999999999998877432 23
Q ss_pred eeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
..+++++||+++ +|.+.+. ....+++..++.++.|++.||+|||+ ++++|+||||+||+++. ++.+||+|||+
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~LH~-~~i~H~~l~p~nil~~~-~~~~~l~dfg~ 152 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLK----AYGALTESVTRKYTRQILEGMSYLHS-NMIVHRDIKGANILRDS-AGNVKLGDFGA 152 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECC-CCCEEEccCCC
Confidence 357899999985 6665554 34568999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCC----CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 161 AKQLIAGE----ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 161 a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
+....... ......++..|+|||.+.+. .++.++|+||+||++|+|++|+.||...+.......+... +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~---~~-- 226 (266)
T cd06651 153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISGE-GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQ---PT-- 226 (266)
T ss_pred ccccccccccCCccccCCccccccCHHHhCCC-CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcC---CC--
Confidence 87543211 11224578889999998654 4889999999999999999999999876554444332211 00
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
...++..+++.++++| +||..||++|||++++++||||+
T Consensus 227 ----------------------~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 227 ----------------------NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ----------------------CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 1112345788999999 67778999999999999999996
No 198
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.1e-44 Score=315.59 Aligned_cols=255 Identities=25% Similarity=0.375 Sum_probs=203.8
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.+-|++.+.||+|+||.||++.+..++..+++|.+.... ....+|+.+++.++|||++++++.+.. ....+
T Consensus 4 ~~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~ 78 (282)
T cd06643 4 EEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-----ENNLW 78 (282)
T ss_pred HHHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-----CCEEE
Confidence 345789999999999999999999999999999885432 234579999999999999999998843 34588
Q ss_pred EEeccccchHH-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPESMY-RVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~~l~-~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+|+||++++.+ ..+.. ...++++..+..++.|++.||+|||+ .|++|+||||+||+++. ++.+||+|||++...
T Consensus 79 ~v~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~-~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~~ 153 (282)
T cd06643 79 ILIEFCAGGAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHE-NKIIHRDLKAGNILFTL-DGDIKLADFGVSAKN 153 (282)
T ss_pred EEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEcc-CCCEEEccccccccc
Confidence 99999996533 33322 34679999999999999999999999 79999999999999996 788999999998754
Q ss_pred ccCC-CcceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGE-ANISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
.... ......+++.|+|||++.. ...++.++|+||+||++|+|++|.+||...+..+....+.......
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~------ 227 (282)
T cd06643 154 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT------ 227 (282)
T ss_pred cccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC------
Confidence 3322 1233567889999999742 2346789999999999999999999998877665555443311000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
...+..++.++.+||.+||+.||.+|||++++++||||+..
T Consensus 228 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 228 --------------------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred --------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 00123478899999999999999999999999999999863
No 199
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-43 Score=316.32 Aligned_cols=252 Identities=26% Similarity=0.426 Sum_probs=204.3
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
..+|++.+.||+|++|.||++.+..+++.||+|.+.... ....+|+.+++.++|||++++++.+.. ....|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-----~~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCEEE
Confidence 358999999999999999999999999999999886432 234579999999999999999998843 33588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+.+ +|.+.+. ...+++.++..++.|++.||.|||+ .||+|+||||+||+++. ++.+||+|||++...
T Consensus 94 lv~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~ql~~aL~~LH~-~gi~H~dLkp~Nill~~-~~~~kl~dfg~~~~~ 166 (296)
T cd06654 94 VVMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQI 166 (296)
T ss_pred EeecccCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcC-CCCEEECccccchhc
Confidence 99999985 5655543 2468899999999999999999999 79999999999999986 788999999998765
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..... .....+++.|+|||.+.+ ..++.++|+||+||++|+|++|..||...+.......+... +.+.
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~--------- 235 (296)
T cd06654 167 TPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPE--------- 235 (296)
T ss_pred cccccccCcccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCC---------
Confidence 43322 223467889999999865 44789999999999999999999999877654443322210 1000
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
...+..++..+.++|.+||..||.+|||+.++++||||...
T Consensus 236 ----------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 236 ----------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred ----------------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 00123478899999999999999999999999999999864
No 200
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.2e-44 Score=313.06 Aligned_cols=252 Identities=29% Similarity=0.524 Sum_probs=200.8
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----------cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
+|+..+.||+|++|.||++.+..+++.||+|.+.... ....+|+.+++.++|+||+++++++ ...
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 5888999999999999999999999999999886432 2345799999999999999999988 344
Q ss_pred eeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
...++|+||+.+ +|.+.+. ...++++..++.++.|++.||+|||+ +|++|+||+|+||+++..+..+||+|||.
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~ql~~al~~LH~-~~i~H~~i~~~nil~~~~~~~~~l~dfg~ 150 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLS----KYGAFKEAVIINYTEQLLRGLSYLHE-NQIIHRDVKGANLLIDSTGQRLRIADFGA 150 (268)
T ss_pred CeEEEEEeccCCCcHHHHHH----HhCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccccc
Confidence 458899999995 5555554 34578999999999999999999999 79999999999999986455799999999
Q ss_pred ccccccCCC-----cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 161 AKQLIAGEA-----NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 161 a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
+........ .....++..|+|||.+.+ ..++.++|+||+||++|+|++|..||...+.......+.+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-- 227 (268)
T cd06630 151 AARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT-- 227 (268)
T ss_pred ccccccccccCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccC--
Confidence 876543321 123457889999999865 458899999999999999999999997654333222222110000
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
....++..+++++.+++.+||+.||++|||+.++++||||+
T Consensus 228 ----------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 228 ----------------------TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ----------------------CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 00112345789999999999999999999999999999985
No 201
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.4e-44 Score=313.34 Aligned_cols=246 Identities=32% Similarity=0.534 Sum_probs=199.5
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------------cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------------RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
+|.+.+.||.|++|.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 77 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--- 77 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe---
Confidence 5788999999999999999999899999999885321 234578999999999999999998733
Q ss_pred CCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 79 KNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
....+++|||+++ +|...+. ..+.+++..++.++.|++.||+|||+ +|++|+||+|+||++++ ++.++|+|
T Consensus 78 --~~~~~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~~l~~~l~~lH~-~~ivH~di~p~nil~~~-~~~~~l~d 149 (267)
T cd06628 78 --ADHLNIFLEYVPGGSVAALLN----NYGAFEETLVRNFVRQILKGLNYLHN-RGIIHRDIKGANILVDN-KGGIKISD 149 (267)
T ss_pred --CCccEEEEEecCCCCHHHHHH----hccCccHHHHHHHHHHHHHHHHHHHh-cCcccccCCHHHEEEcC-CCCEEecc
Confidence 3458899999985 5555554 34678999999999999999999999 79999999999999996 78899999
Q ss_pred eccccccccCCC-------cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Q 018619 158 FGSAKQLIAGEA-------NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 230 (353)
Q Consensus 158 fg~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 230 (353)
||.+........ .....++..|+|||.+.+. .++.++|+||+||++|+|++|+.||...+....+..+....
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 228 (267)
T cd06628 150 FGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT-SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA 228 (267)
T ss_pred cCCCcccccccccCCccccccccCCCcCccChhHhccC-CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC
Confidence 999886643211 1123467889999998654 47889999999999999999999998776554443322200
Q ss_pred CCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 231 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
...++..++.++.++|++||+.||.+||++.++++||||
T Consensus 229 ----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 229 ----------------------------SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ----------------------------CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 001223578999999999999999999999999999997
No 202
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-43 Score=315.93 Aligned_cols=252 Identities=28% Similarity=0.467 Sum_probs=204.9
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
.+|++.+.||.|++|.||++.+..+++.|++|.+.... ....+|+.+++.++|||++++++.+. ....+|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEEE
Confidence 47999999999999999999999999999999885432 23457999999999999999999883 3345889
Q ss_pred Eeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 87 VMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 87 v~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
|+||+.+ +|...+. ...+++.++..++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||++....
T Consensus 94 v~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~-~~i~H~dL~p~Nili~~-~~~~kl~dfg~~~~~~ 166 (296)
T cd06655 94 VMEYLAGGSLTDVVT-----ETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGM-DGSVKLTDFGFCAQIT 166 (296)
T ss_pred EEEecCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEccCccchhcc
Confidence 9999986 4444433 2468999999999999999999999 79999999999999996 7889999999987654
Q ss_pred cCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 166 AGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 166 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
.... .....++..|+|||.+.+ ..++.++|+||+||++|+|++|..||...+..+....+... ..+.
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~---------- 234 (296)
T cd06655 167 PEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE---------- 234 (296)
T ss_pred cccccCCCcCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcc----------
Confidence 4332 223467889999999855 44889999999999999999999999887766554433221 1000
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
...+..+++.+.+||++||..||.+|||+.+++.||||+..+
T Consensus 235 ---------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 235 ---------------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred ---------------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 001235788999999999999999999999999999998654
No 203
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-43 Score=309.52 Aligned_cols=249 Identities=31% Similarity=0.456 Sum_probs=206.0
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|++.+.||+|++|.||+|.+..+++.+|+|.+.... ....+|+.+++.++|||++++++.+. .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL-----EDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe-----cCCEEE
Confidence 5899999999999999999999999999999886432 23457999999999999999998873 344588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+... ....+++..+..++.|++.||+|||+ +|++|+||+|+||+++.+++.+||+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHT-KLILHRDLKTQNILLDKHKMVVKIGDFGISKIL 152 (256)
T ss_pred EEEecCCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence 99999985 676666542 24558999999999999999999999 799999999999999865667899999999876
Q ss_pred ccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 165 IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
..........++..|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.......+.....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~------------- 218 (256)
T cd08220 153 SSKSKAYTVVGTPCYISPELCEGK-PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF------------- 218 (256)
T ss_pred CCCccccccccCCcccCchhccCC-CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC-------------
Confidence 655544456788899999998654 478899999999999999999999988776555444332100
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..++..++.++.+++.+||+.||++|||+.++++||||
T Consensus 219 ---------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 219 ---------------APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred ---------------CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 01223478899999999999999999999999999997
No 204
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8.4e-44 Score=314.68 Aligned_cols=257 Identities=27% Similarity=0.412 Sum_probs=203.5
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHc-CCCceeecceeeeecCC-CCceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVM-DHPNVISLKHCFFSTTS-KNELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~-~~~~~~ 84 (353)
.+.|++.+.||.|+||.||++.+..+++.||+|.+.... .....|+.+++.+ +|||++++++++..... .....+
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 478999999999999999999999999999999886542 2345788888888 79999999998864332 234568
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|++|||+++ +|.+.+... ....+++..++.++.|++.||+|||+ +||+|+||+|+||+++. ++.++|+|||++..
T Consensus 95 ~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dl~~~nili~~-~~~~~l~dfg~~~~ 170 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNT--KGNALKEDWIAYICREILRGLAHLHA-HKVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEeCCCCcHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEeeCcchhh
Confidence 899999985 666665432 24568899999999999999999999 79999999999999996 78899999999875
Q ss_pred cccC-CCcceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 164 LIAG-EANISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 164 ~~~~-~~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
.... .......+++.|+|||.+.. ...++.++|+||+||++|+|++|..||...........+... ..
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~---- 243 (282)
T cd06636 171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PP---- 243 (282)
T ss_pred hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---CC----
Confidence 4322 22234568899999999753 234788999999999999999999999776544333322110 00
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.......++.++.+||++||+.||.+|||+.+++.||||
T Consensus 244 --------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 244 --------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred --------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 000113478899999999999999999999999999997
No 205
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.8e-43 Score=309.20 Aligned_cols=252 Identities=25% Similarity=0.432 Sum_probs=207.3
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||.|++|.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++.+.. .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 5899999999999999999999999999999885432 234468999999999999999887643 2334578
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhH-----cCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIH-----TVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH-----~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
++|||++ ++|.+.+.........+++..++.++.||+.||.||| + .+++|+||||+||+++. ++.+||+|||
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~-~~i~h~dl~p~nili~~-~~~~kl~d~g 155 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG-NTVLHRDLKPANIFLDA-NNNVKLGDFG 155 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc-CcceecCCCHHHEEEec-CCCEEEeccc
Confidence 9999998 4777777765555678999999999999999999999 8 79999999999999996 7899999999
Q ss_pred cccccccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 160 SAKQLIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 160 ~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
++........ .....+++.|+|||.+.+. .++.++|+||||+++|+|++|..||...+.......+... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~------- 226 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHM-SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG-K------- 226 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCC-CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC-C-------
Confidence 9987655443 3345789999999998654 4889999999999999999999999887744433322210 0
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
. ..++...+.++.+++.+||+.||++|||+.++++|||+
T Consensus 227 -----------~---------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 227 -----------F---------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred -----------C---------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 0 01234578899999999999999999999999999996
No 206
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=322.33 Aligned_cols=248 Identities=27% Similarity=0.360 Sum_probs=205.2
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc---ccchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD---RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
|.+....+.+.+.||+|.||.||.+....+ ..||+|.+... ...+.+|+.+|++|+|++||++++++.. ..
T Consensus 201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-----~~ 274 (468)
T KOG0197|consen 201 WEIPREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTK-----QE 274 (468)
T ss_pred eeecHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEec-----CC
Confidence 556677788899999999999999997433 37899988643 3455689999999999999999999943 33
Q ss_pred eEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+|||||||. |+|.+.|.. ..+..+...+...++.|||+|++||++ +++|||||-..||||+. +..+||+|||+|
T Consensus 275 piyIVtE~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes-~~~IHRDLAARNiLV~~-~~~vKIsDFGLA 350 (468)
T KOG0197|consen 275 PIYIVTEYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLES-KNYIHRDLAARNILVDE-DLVVKISDFGLA 350 (468)
T ss_pred ceEEEEEecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHh-CCccchhhhhhheeecc-CceEEEcccccc
Confidence 5899999999 788888875 356789999999999999999999999 79999999999999996 889999999999
Q ss_pred cccccCCCcce--eeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 162 KQLIAGEANIS--YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 162 ~~~~~~~~~~~--~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
+...++..... .....-|.|||.+.. ..++.+|||||||++||||+| |+.||.+.+..+.+..+.+...-|-
T Consensus 351 r~~~d~~Y~~~~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~---- 425 (468)
T KOG0197|consen 351 RLIGDDEYTASEGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPR---- 425 (468)
T ss_pred cccCCCceeecCCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCC----
Confidence 95433332211 122456999999955 459999999999999999997 8999999999999888776432222
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
|..+|+++-+++..||..+|++|||.+.+.
T Consensus 426 ------------------------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 426 ------------------------PEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ------------------------CCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 246899999999999999999999998653
No 207
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.3e-44 Score=317.77 Aligned_cols=252 Identities=27% Similarity=0.442 Sum_probs=203.2
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
.+|++.+.||+|++|.||++.+..+++.||+|.+.... ....+|+.+++.++|||++++++.+. .....|+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~l 93 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELWV 93 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEEEE
Confidence 68999999999999999999999999999999886432 23457899999999999999999883 3445889
Q ss_pred Eeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 87 VMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 87 v~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
||||+++ +|.+.+. ...+++..+..++.|++.||.|||+ .|++|+||||+||+++. ++.++|+|||++....
T Consensus 94 v~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~l~~~L~~LH~-~~i~H~dL~p~Nili~~-~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 94 VMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQIT 166 (297)
T ss_pred eecccCCCCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEECcCccceEcc
Confidence 9999985 5555443 2468899999999999999999999 79999999999999996 7889999999987654
Q ss_pred cCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 166 AGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 166 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
.... .....+++.|+|||.+.+ ..++.++|+||+||++|+|++|..||...+.......+.. .+.+
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~----------- 233 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP----------- 233 (297)
T ss_pred CCccCcCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCC-----------
Confidence 3332 223467889999999865 4588999999999999999999999977654333221111 0000
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
....+..++..+.+||.+||+.||++|||+.++++||||+..+
T Consensus 234 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 234 --------------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred --------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 0011234788999999999999999999999999999998754
No 208
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-45 Score=298.61 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=207.6
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccc-----hHHHHHHHH-HcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-----KNRELQLMR-VMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~E~~~l~-~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+..++..||+|..|+|++++.+.+|...|||.+.+.... +...++++. ..+.|+||+.+++|....+ ++
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d-----V~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD-----VF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch-----HH
Confidence 346678899999999999999999999999999654322 223333332 3358999999999966554 78
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+.||.|..-...++.. -.++++|..+-.+...++.||.||.+.+||+|||+||+|||+|. .|++||||||++..+.
T Consensus 168 IcMelMs~C~ekLlkr---ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe-~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 168 ICMELMSTCAEKLLKR---IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGNIKLCDFGISGRLV 243 (391)
T ss_pred HHHHHHHHHHHHHHHH---hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc-CCCEEeecccccceee
Confidence 9999998655555543 34679999999999999999999999789999999999999996 8999999999999988
Q ss_pred cCCCcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 166 AGEANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 166 ~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
+....+...|.+.|||||.+.- ...|..++||||||+.++||.||+.||.+.+ +.+.+.++.+. .|+.
T Consensus 244 dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--ePP~------- 314 (391)
T KOG0983|consen 244 DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--EPPL------- 314 (391)
T ss_pred cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc--CCCC-------
Confidence 8888888899999999999843 3468899999999999999999999998855 45566555552 1111
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
++ ....+|+++.+|+..||++|+.+||.-.++|+|||+....
T Consensus 315 -------L~----------~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 315 -------LP----------GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred -------CC----------cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence 00 1134899999999999999999999999999999998754
No 209
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.8e-44 Score=314.33 Aligned_cols=253 Identities=25% Similarity=0.385 Sum_probs=200.4
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
..++|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++.+. ....+
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~ 81 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKL 81 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEE
Confidence 3568999999999999999999999999999999886432 23457999999999999999999873 33458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|++|||+++ +|.+.+. ..+.+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.++|+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~-~~~~~l~dfg~~~~ 155 (267)
T cd06645 82 WICMEFCGGGSLQDIYH----VTGPLSESQIAYVSRETLQGLYYLHS-KGKMHRDIKGANILLTD-NGHVKLADFGVSAQ 155 (267)
T ss_pred EEEEeccCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEECcceeeeE
Confidence 899999985 6655554 35679999999999999999999999 79999999999999996 78899999999875
Q ss_pred cccCC-CcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
..... ......|++.|+|||.+.. ...++.++|+||+||++|+|++|..||................
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~---------- 225 (267)
T cd06645 156 ITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSN---------- 225 (267)
T ss_pred ccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccC----------
Confidence 54322 1234568899999999742 3347889999999999999999999997655443332221110
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 296 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 296 (353)
...+ .+.. ...++..+.++|.+||+.||++|||++++++|||
T Consensus 226 -------~~~~-----~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 226 -------FQPP-----KLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -------CCCC-----cccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0000 0000 1136788999999999999999999999999998
No 210
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.3e-43 Score=310.52 Aligned_cols=247 Identities=28% Similarity=0.471 Sum_probs=198.2
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----------cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
+|.+.+.||.|+||.||++.+ .+++.+|+|.+.... ....+|+.+++.++|+||+++++++. ..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-----DD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-----cC
Confidence 588999999999999999986 588899999875321 23457999999999999999999883 33
Q ss_pred eeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
...++++||+.+ +|.+.+. ....+++..++.++.|++.||+|||+ .+++|+||+|+||++++ ++.++|+|||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~ 148 (265)
T cd06631 75 NTISIFMEFVPGGSISSILN----RFGPLPEPVFCKYTKQILDGVAYLHN-NCVVHRDIKGNNVMLMP-NGIIKLIDFGC 148 (265)
T ss_pred CeEEEEEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHhEEECC-CCeEEeccchh
Confidence 568899999986 5555553 34578999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccC-------CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 018619 161 AKQLIAG-------EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 233 (353)
Q Consensus 161 a~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 233 (353)
+...... .......++..|+|||.+.+. .++.++|+||+||++|+|++|..||...+.......+....+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 226 (265)
T cd06631 149 ARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES-GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL- 226 (265)
T ss_pred hHhhhhccccccccccccccCCCccccChhhhcCC-CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-
Confidence 8754321 111234578899999998654 4889999999999999999999999876655443332221000
Q ss_pred CHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 234 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
...++..++.++.++|++||+.||.+|||+.++++||||
T Consensus 227 -------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 227 -------------------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred -------------------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 011234578999999999999999999999999999997
No 211
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.6e-44 Score=310.84 Aligned_cols=246 Identities=27% Similarity=0.450 Sum_probs=202.7
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+|.+.+.||.|+||.||+|.+..+++.||+|.+.+.. ....+|+.+++.++||||+++++.+ .+....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 5899999999999999999999999999999886432 2345799999999999999999887 445568
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++|+||+.+ +|...+.. ...+++..+..++.|++.||.|||+ +|++|+||+|+||++++ ++.++|+|||.+..
T Consensus 76 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~-~~~~~l~d~~~~~~ 149 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHS-KGIIHRDIKPDNILLDE-QGHVHITDFNIATK 149 (258)
T ss_pred EEEEeCCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEEcC-CCCEEEeecccccc
Confidence 999999986 55555442 3689999999999999999999999 79999999999999996 78899999999987
Q ss_pred cccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHhhc
Q 018619 164 LIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV--DQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...........++..|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.. +.+..... .
T Consensus 150 ~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~--------- 216 (258)
T cd05578 150 VTPDTLTTSTSGTPGYMAPEVLCRQ-GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE---T--------- 216 (258)
T ss_pred cCCCccccccCCChhhcCHHHHccc-CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc---c---------
Confidence 6554444456678899999998554 4899999999999999999999999877642 22211111 0
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH--HHHhcCccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA--LEACAHPFF 297 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~--~~~l~hp~f 297 (353)
....++..++.++.++|++||+.||.+|+++ .|+++||||
T Consensus 217 ----------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 ----------------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ----------------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0111234578999999999999999999999 999999998
No 212
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.5e-43 Score=308.67 Aligned_cols=248 Identities=33% Similarity=0.541 Sum_probs=202.2
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
+|+..+.||+|++|.||+|.+..+++.|++|.+.... ....+|+.+++.++|+||+++++.+ ....
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE-----REED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE-----ecCC
Confidence 5888999999999999999998899999999885432 2345799999999999999999877 3334
Q ss_pred eEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+++++||+++ +|.+.+. ....+++..++.++.|++.||+|||+ .|++|+||+|+||+++. ++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~~~ni~~~~-~~~~kl~d~~~~ 149 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLK----KYGSFPEPVIRLYTRQILLGLEYLHD-RNTVHRDIKGANILVDT-NGVVKLADFGMA 149 (258)
T ss_pred eEEEEEEecCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEccCccc
Confidence 58899999985 5655554 34568999999999999999999999 79999999999999996 788999999998
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
.............++..|+|||.+.....++.++|+||+||++|+|++|..||......+....+......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------- 220 (258)
T cd06632 150 KQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL--------- 220 (258)
T ss_pred eeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC---------
Confidence 86554443445667889999999854334789999999999999999999999876644444332221000
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..++..+++++.+++++||+.||++|||+.+++.|||+
T Consensus 221 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 221 ------------------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ------------------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 01234578999999999999999999999999999996
No 213
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.3e-43 Score=306.27 Aligned_cols=248 Identities=26% Similarity=0.396 Sum_probs=203.3
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||++.+..+++.|++|.+... .....+|+.+++.++|||++++++.+. .....|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence 488999999999999999999999999999988532 233457899999999999999999883 334588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+.+ +|.+.+... ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||++...
T Consensus 76 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~-~~i~h~dl~~~nili~~-~~~~~l~df~~~~~~ 151 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLFLDA-YDNVKIGDLGVAKLL 151 (256)
T ss_pred EEEEeCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEeC-CCCEEEcccccceec
Confidence 99999974 666666542 24678999999999999999999999 79999999999999996 788999999998865
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..... .....+++.|+|||++.+. .++.++|+|||||++++|++|..||...+.......+.....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------ 218 (256)
T cd08529 152 SDNTNFANTIVGTPYYLSPELCEDK-PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF------------ 218 (256)
T ss_pred cCccchhhccccCccccCHHHhcCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC------------
Confidence 44332 2234678899999998654 488999999999999999999999988876555444332100
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..++..++.++.++|.+||+.+|++||++.++++|||+
T Consensus 219 ----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 219 ----------------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ----------------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 00122468899999999999999999999999999995
No 214
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.5e-44 Score=313.86 Aligned_cols=253 Identities=26% Similarity=0.390 Sum_probs=199.3
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
..++|++.+.||+|+||.||++++..+++.||+|++.... ....+|+.+++.++||||+++++.+.. ...+
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-----~~~~ 81 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-----REKL 81 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-----CCEE
Confidence 3567999999999999999999999999999999886432 234579999999999999999988843 3458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++||||+++ +|.+.+. ....+++..+..++.|++.||+|||+ +||+|+||||+||+++. ++.+||+|||++..
T Consensus 82 ~iv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nill~~-~~~~~l~dfg~~~~ 155 (267)
T cd06646 82 WICMEYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLAYLHS-KGKMHRDIKGANILLTD-NGDVKLADFGVAAK 155 (267)
T ss_pred EEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECC-CCCEEECcCcccee
Confidence 899999995 5555553 34678999999999999999999999 79999999999999986 77899999999986
Q ss_pred cccCC-CcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
..... ......+++.|+|||.+.+ ...++.++|+||+||++|+|++|..||...+..+....+...
T Consensus 156 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~----------- 224 (267)
T cd06646 156 ITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS----------- 224 (267)
T ss_pred ecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC-----------
Confidence 54322 2234567889999998743 334678999999999999999999999655433222111110
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 296 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 296 (353)
.+..+ .+. ....++..+.+||++||+.||++|||++++++|+|
T Consensus 225 ------~~~~~-----~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 225 ------NFQPP-----KLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred ------CCCCC-----CCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 00000 000 11246889999999999999999999999999997
No 215
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.4e-43 Score=308.72 Aligned_cols=251 Identities=29% Similarity=0.464 Sum_probs=203.7
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
.++|++.+.||+|++|.||++.+..+++.|++|.+.... ....+|+.+++.++||||+++++.+.. ...+|++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~ 76 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFK-----NTDLWIV 76 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-----CCcEEEE
Confidence 478999999999999999999999889999999886543 445689999999999999999998843 3458899
Q ss_pred eccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 88 MEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 88 ~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
+||+++ +|.+.+.. ....+++..++.++.|++.||.|||+ .+++|+||+|+||+++. ++.++|+|||++.....
T Consensus 77 ~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~ni~~~~-~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 77 MEYCGAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHS-NKKIHRDIKAGNILLNE-EGQAKLADFGVSGQLTD 151 (256)
T ss_pred EecCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEECC-CCcEEEcccccchhccc
Confidence 999995 55555532 34678999999999999999999999 79999999999999996 78899999999986654
Q ss_pred CC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCC
Q 018619 167 GE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 245 (353)
Q Consensus 167 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
.. ......++..|+|||.+.+. .++.++||||+||++|+|++|..||...+.......+... .
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~--~------------- 215 (256)
T cd06612 152 TMAKRNTVIGTPFWMAPEVIQEI-GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--P------------- 215 (256)
T ss_pred CccccccccCCccccCHHHHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC--C-------------
Confidence 43 22334578899999998654 5889999999999999999999999876554332221110 0
Q ss_pred CCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 246 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.+ ....+..++.++.++|.+||+.||.+|||+.+++.||||
T Consensus 216 ----~~-------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 216 ----PP-------TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ----CC-------CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 00 000123467899999999999999999999999999997
No 216
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.7e-43 Score=309.28 Aligned_cols=246 Identities=29% Similarity=0.487 Sum_probs=199.7
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
||.|++|.||++.+..+++.||+|.+.+.. ....+|+.+++.++||||+++++.+. ....+|++|||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEecC
Confidence 699999999999999999999999886432 23457999999999999999999873 334588999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN 170 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~ 170 (353)
++ +|.+.+.. ...+++..+..++.|++.||+|||+ ++++|+||+|+||+++. ++.++|+|||++.........
T Consensus 76 ~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~-~~~~h~dl~~~nilv~~-~~~~~l~df~~~~~~~~~~~~ 149 (262)
T cd05572 76 LGGELWTILRD----RGLFDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLLDS-NGYVKLVDFGFAKKLKSGQKT 149 (262)
T ss_pred CCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEEcC-CCCEEEeeCCcccccCccccc
Confidence 84 66655543 4568999999999999999999999 89999999999999996 788999999999876554433
Q ss_pred ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCCHHHHhhcCcCCCCC
Q 018619 171 ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN--AVDQLVEIIKVLGTPTREEIRCMNPNYTDF 248 (353)
Q Consensus 171 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
....+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||...+ ..+....+.....
T Consensus 150 ~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------- 211 (262)
T cd05572 150 WTFCGTPEYVAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG----------------- 211 (262)
T ss_pred ccccCCcCccChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC-----------------
Confidence 44567889999999855 448899999999999999999999998766 3333333221000
Q ss_pred cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCC
Q 018619 249 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 303 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~ 303 (353)
...++...++++.++|.+||+.||++|+| +.|+++||||+...+.
T Consensus 212 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 212 ----------KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred ----------CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 01122345889999999999999999999 9999999999987543
No 217
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2e-43 Score=308.78 Aligned_cols=253 Identities=28% Similarity=0.422 Sum_probs=203.0
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.++|++.+.||+|++|.||+|.+..+++.+++|.+.... ....+|+.+++.++||||+++++.+.. ...+|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-----RDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-----CCEEE
Confidence 468999999999999999999999999999999886542 345689999999999999999988733 34588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++|||+++ +|.+.+.. ....+++..++.++.|++.||+|||+ +|++|+||+|+||+++. ++.+||+|||++...
T Consensus 77 l~~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~ 151 (262)
T cd06613 77 IVMEYCGGGSLQDIYQV---TRGPLSELQIAYVCRETLKGLAYLHE-TGKIHRDIKGANILLTE-DGDVKLADFGVSAQL 151 (262)
T ss_pred EEEeCCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCChhhEEECC-CCCEEECccccchhh
Confidence 99999996 55444432 23679999999999999999999999 79999999999999996 788999999998765
Q ss_pred ccCC-CcceeeeeceeeChhhhhCC--CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGA--TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
.... ......++..|+|||.+.+. ..++.++|+||+||++|+|++|.+||...+.......+....-.+.
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 224 (262)
T cd06613 152 TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP------- 224 (262)
T ss_pred hhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc-------
Confidence 4432 22334678889999998553 2578899999999999999999999988776555443332100000
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 296 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 296 (353)
. .......+.++.+|+++||+.||.+|||+.+++.|||
T Consensus 225 ----------~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 225 ----------K-------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ----------c-------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 0 0011235788999999999999999999999999998
No 218
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.3e-44 Score=340.01 Aligned_cols=283 Identities=19% Similarity=0.287 Sum_probs=197.4
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCc-EEEEE------------------Eeecc---ccchHHHHHHHHHcCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGE-TVAIK------------------KVLQD---RRYKNRELQLMRVMDHPNVI 67 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-~vaiK------------------~~~~~---~~~~~~E~~~l~~l~h~~iv 67 (353)
.++|++.+.||+|+||+||++..+.... ..+.| .+... ...+.+|+.+++.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 3689999999999999999987643322 11211 11111 12345899999999999999
Q ss_pred ecceeeeecCCCCceeEEEEeccccchHHHHHHhhh-hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEE
Q 018619 68 SLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYS-SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 146 (353)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill 146 (353)
++++++.. ....|++++++.+++...+.... ..........++.++.||+.||+|||+ +||+||||||+|||+
T Consensus 227 ~l~~~~~~-----~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~NILl 300 (501)
T PHA03210 227 KIEEILRS-----EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-KKLIHRDIKLENIFL 300 (501)
T ss_pred cEeEEEEE-----CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEE
Confidence 99998843 33478999999988777664321 112334567788999999999999999 799999999999999
Q ss_pred eCCCCcEEEeeeccccccccCCC--cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCC-CCC--CChHH
Q 018619 147 DPLTHQVKICDFGSAKQLIAGEA--NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPL-FPG--ENAVD 221 (353)
Q Consensus 147 ~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~p-f~~--~~~~~ 221 (353)
+. ++.+||+|||++........ .....||+.|+|||++.+. .++.++|||||||++|+|++|..+ |.. .+...
T Consensus 301 ~~-~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 301 NC-DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGD-GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred CC-CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 96 78899999999986654332 2345789999999999664 489999999999999999998854 432 23345
Q ss_pred HHHHHHHHhCCCCHHHHh---hcCcCCCCCcCCCCCCCcccccc-CCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 222 QLVEIIKVLGTPTREEIR---CMNPNYTDFRFPQIKAHPWHKVF-HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.+.+++..++....+... ..........+.... ......+ ...++.++.++|.+||++||.+|||+.|+|+||||
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAG-HSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCc-cchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 555555544432211000 000000000000000 0000001 12467889999999999999999999999999999
Q ss_pred cccc
Q 018619 298 DELR 301 (353)
Q Consensus 298 ~~~~ 301 (353)
....
T Consensus 458 ~~~~ 461 (501)
T PHA03210 458 SAEE 461 (501)
T ss_pred hcCC
Confidence 8743
No 219
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.4e-43 Score=308.01 Aligned_cols=250 Identities=29% Similarity=0.490 Sum_probs=199.0
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---------cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
.+|++.+.||+|+||.||.+.+..+++.||||.+..+. ....+|+.+++.++||||+++++++... ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence 57999999999999999999999999999999875321 2345799999999999999998876322 23
Q ss_pred eeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
..++++|||+++ +|.+.+. ....+++..+..++.|++.||+|||+ ++++|+||||+||+++. ++.++|+|||+
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~Dfg~ 152 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLK----SYGALTENVTRKYTRQILEGVSYLHS-NMIVHRDIKGANILRDS-VGNVKLGDFGA 152 (265)
T ss_pred ceEEEEEEecCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEecC-CCCEEECcCcc
Confidence 457899999985 5655554 33568899999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCC----CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 161 AKQLIAGE----ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 161 a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
+....... ......++..|+|||.+.+ ..++.++|+||+||++|+|++|+.||...+......++.. .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~-- 226 (265)
T cd06652 153 SKRLQTICLSGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPT-- 226 (265)
T ss_pred ccccccccccccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCC--
Confidence 87543211 1223457889999999865 4588999999999999999999999987655444332221 110
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
...++..++..+.++|++||. +|.+||+++++++|||+.
T Consensus 227 ----------------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 227 ----------------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred ----------------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 011233568889999999995 999999999999999984
No 220
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.1e-43 Score=311.65 Aligned_cols=250 Identities=27% Similarity=0.387 Sum_probs=191.5
Q ss_pred eeecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHHHHHHH---HcCCCceeecceeeeecCCCCceeEEEE
Q 018619 18 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMR---VMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~~l~---~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
.||+|+||.||++.+..+++.||+|.+.+... ...+|..+++ ..+|||++.+++.+.. ....++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-----PDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-----CCeEEEE
Confidence 48999999999999999999999998854321 1223443333 3479999999888733 3358899
Q ss_pred eccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 88 MEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 88 ~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|||+.+ +|...+. ..+.+++..+..++.|++.||+|||+ ++|+|+||||+||+++. ++.++|+|||++.....
T Consensus 76 ~e~~~~~~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dikp~Nil~~~-~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 76 LDLMNGGDLHYHLS----QHGVFSEKEMRFYATEIILGLEHMHN-RFVVYRDLKPANILLDE-HGHVRISDLGLACDFSK 149 (279)
T ss_pred EecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcCCCCCCHHHEEECC-CCCEEEccCCcceeccc
Confidence 999995 5544443 45679999999999999999999999 79999999999999996 78899999999875433
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.. .....++..|+|||.+.+...++.++|+||+||++|+|++|..||......... .+.....
T Consensus 150 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~--------------- 212 (279)
T cd05633 150 KK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL--------------- 212 (279)
T ss_pred cC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhh---------------
Confidence 22 223468999999999864455889999999999999999999999764322111 1111000
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCCCC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREPNA 305 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~~~ 305 (353)
.+...++..++.++.++|++||..||.+|+ |+.++++||||+.+.+...
T Consensus 213 ----------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~ 266 (279)
T cd05633 213 ----------TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQV 266 (279)
T ss_pred ----------cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHH
Confidence 001112345789999999999999999999 6999999999999765543
No 221
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.1e-43 Score=304.74 Aligned_cols=248 Identities=31% Similarity=0.477 Sum_probs=205.1
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|++.+.||.|+||.||.+++..+++.+++|.+.... ....+|+.+++.++|+||+++++++.. ...++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-----DNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-----CCeEE
Confidence 6999999999999999999999999999999875432 234579999999999999999999843 34588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++|||+++ +|.+.+... ....+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.+||+|||++...
T Consensus 76 ~~~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~ni~~~~-~~~~kl~d~~~~~~~ 151 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQ--KGQLFEEEMVLWYLFQIVSAVSYIHK-AGILHRDIKTLNIFLTK-AGLIKLGDFGISKIL 151 (256)
T ss_pred EEEEecCCCcHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChHhEEEeC-CCCEEECcCcceEEc
Confidence 99999984 777666532 24578999999999999999999999 79999999999999996 788999999999865
Q ss_pred ccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.... ......+++.|+|||.+.+.. ++.++|+||+||++|+|++|..||...+..+....+... ...
T Consensus 152 ~~~~~~~~~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~--------- 219 (256)
T cd08221 152 GSEYSMAETVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT--------- 219 (256)
T ss_pred ccccccccccCCCccccCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC---------
Confidence 4433 233456789999999986644 788999999999999999999999887766655554331 000
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.....++.++.++|.+||+.||.+|||+.++++|||+
T Consensus 220 -----------------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 -----------------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -----------------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 0113468899999999999999999999999999996
No 222
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.2e-43 Score=314.51 Aligned_cols=254 Identities=29% Similarity=0.465 Sum_probs=203.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|+||.||++.+..+++.|++|.+.... ....+|+.+++.++||||+++++.+ .....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCE
Confidence 47999999999999999999999999999999886432 2334789999999999999999887 34446
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+++||||++| +|.+.+. ..+.+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||+++
T Consensus 76 ~~lv~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~NIll~~-~~~~~l~dfg~~~ 149 (305)
T cd05609 76 LCMVMEYVEGGDCATLLK----NIGALPVDMARMYFAETVLALEYLHN-YGIVHRDLKPDNLLITS-MGHIKLTDFGLSK 149 (305)
T ss_pred EEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHEEECC-CCCEEEeeCCCcc
Confidence 8999999986 5555554 34678999999999999999999999 79999999999999996 8889999999986
Q ss_pred ccccCC----------------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 018619 163 QLIAGE----------------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 226 (353)
Q Consensus 163 ~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~ 226 (353)
...... ......++..|+|||.+.+ ..++.++|+||+||++|+|++|..||.+.+..+....+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~ 228 (305)
T cd05609 150 IGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV 228 (305)
T ss_pred ccCcCccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 321100 0012346778999999865 45899999999999999999999999887766555444
Q ss_pred HHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC---HHHHhcCcccccccC
Q 018619 227 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT---ALEACAHPFFDELRE 302 (353)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t---~~~~l~hp~f~~~~~ 302 (353)
...... .+. ....++.++.++|.+||+.||++||+ +.++++||||....+
T Consensus 229 ~~~~~~-----------------~~~---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~ 281 (305)
T cd05609 229 ISDDIE-----------------WPE---------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDW 281 (305)
T ss_pred HhcccC-----------------CCC---------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCH
Confidence 331000 000 01246889999999999999999998 799999999977544
No 223
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.3e-43 Score=314.83 Aligned_cols=254 Identities=27% Similarity=0.410 Sum_probs=203.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
+.|.....||+|+||.||++.+..+++.||||.+.... ....+|+.+++.++|||++++++.+. .....|+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~l 96 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWV 96 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEE
Confidence 45666788999999999999999999999999885432 23457999999999999999999874 3345889
Q ss_pred Eeccccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 87 VMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 87 v~e~~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
||||++++ +.+.+. .+.+++..++.++.||+.||+|||+ +||+||||||+||+++. ++.++|+|||++....
T Consensus 97 v~e~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~-~~~~kL~dfg~~~~~~ 169 (292)
T cd06658 97 VMEFLEGGALTDIVT-----HTRMNEEQIATVCLSVLRALSYLHN-QGVIHRDIKSDSILLTS-DGRIKLSDFGFCAQVS 169 (292)
T ss_pred EEeCCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcC-CCCEEEccCcchhhcc
Confidence 99999864 444332 3568999999999999999999999 79999999999999996 7889999999987543
Q ss_pred cCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 166 AGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 166 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
.... .....++..|+|||.+.+ ..++.++|+||+|+++|+|++|..||...+.......+........
T Consensus 170 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 238 (292)
T cd06658 170 KEVPKRKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV---------- 238 (292)
T ss_pred cccccCceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc----------
Confidence 3222 234567899999999855 4488999999999999999999999987776554443322111000
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
......+..+.+++.+||..||.+|||++++++||||+....+
T Consensus 239 ----------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 239 ----------------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred ----------------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 0012468899999999999999999999999999999976544
No 224
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.2e-43 Score=307.47 Aligned_cols=252 Identities=32% Similarity=0.540 Sum_probs=199.1
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc--------------cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------------RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
+|.+.+.||+|++|.||++.+..+|+.||+|.+.... ..+.+|+.+++.++|||++++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~---- 77 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE---- 77 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe----
Confidence 6899999999999999999999999999999874311 1245789999999999999999887
Q ss_pred CCCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
......++||||+.+ +|.+.+.. .+.+++..++.++.|++.||.|||+ ++++|+||+|+||+++. ++.++|+
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~~~nil~~~-~~~~~l~ 150 (272)
T cd06629 78 -TTEEYLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHS-KGILHRDLKADNLLVDA-DGICKIS 150 (272)
T ss_pred -ccCCceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhh-CCeeecCCChhhEEEcC-CCeEEEe
Confidence 333458899999985 56555543 3678999999999999999999999 79999999999999996 8899999
Q ss_pred eeccccccccCC---CcceeeeeceeeChhhhhCCC-CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 018619 157 DFGSAKQLIAGE---ANISYICSRFYRAPELIFGAT-EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 157 Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|||++....... ......++..|+|||.+.+.. .++.++|+||+|+++|+|++|..||...+.......+.....
T Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~- 229 (272)
T cd06629 151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRS- 229 (272)
T ss_pred eccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcccc-
Confidence 999987543321 122345788899999986543 478899999999999999999999976554433322211000
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
...+...+...++.++.++|.+||+.||++|||++++++||||
T Consensus 230 ----------------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 230 ----------------------APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ----------------------CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 0001111223578999999999999999999999999999997
No 225
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.9e-43 Score=311.58 Aligned_cols=251 Identities=29% Similarity=0.428 Sum_probs=199.1
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
||+|+||+||+|.+..+|+.||+|.+.+.. ....+|+.+++.++|||++++++++ ......|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 689999999999999999999999885421 2234799999999999999998887 3344588999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN 170 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~ 170 (353)
++ +|.+.+... ....+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||.+.........
T Consensus 76 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~Nil~~~-~~~~~l~dfg~~~~~~~~~~~ 151 (277)
T cd05577 76 NGGDLKYHIYNV--GEPGFPEARAIFYAAQIICGLEHLHQ-RRIVYRDLKPENVLLDD-HGNVRISDLGLAVELKGGKKI 151 (277)
T ss_pred CCCcHHHHHHHc--CcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECC-CCCEEEccCcchhhhccCCcc
Confidence 85 665555432 22468999999999999999999999 79999999999999996 788999999998765544333
Q ss_pred ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcC
Q 018619 171 ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 250 (353)
Q Consensus 171 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
....++..|+|||.+.+.. ++.++|+||+||++|+|++|+.||...+.......+.+....
T Consensus 152 ~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------ 212 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE------------------ 212 (277)
T ss_pred ccccCCCCcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc------------------
Confidence 4456788899999986654 889999999999999999999999776542221111111000
Q ss_pred CCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCCC
Q 018619 251 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREPN 304 (353)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~~ 304 (353)
....++..+++++.++|++||+.||.+|| ++.++++||||+.+.+..
T Consensus 213 -------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~ 264 (277)
T cd05577 213 -------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR 264 (277)
T ss_pred -------ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhh
Confidence 01112345789999999999999999999 899999999999876643
No 226
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6e-43 Score=304.77 Aligned_cols=248 Identities=25% Similarity=0.426 Sum_probs=203.5
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|++.+.||+|+||.||++.+..+|+.||+|.+... .....+|+.+++.++||||+++.+++ ......+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 589999999999999999999999999999988532 12455799999999999999999887 4445688
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+.+ +|.+.+.. .....+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++...
T Consensus 76 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~l~~~nil~~~-~~~~~l~d~~~~~~~ 151 (256)
T cd08218 76 IVMDYCEGGDLYKKINA--QRGVLFPEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTK-DGTIKLGDFGIARVL 151 (256)
T ss_pred EEEecCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcC-CCCEEEeeccceeec
Confidence 99999985 66665543 123468899999999999999999999 79999999999999996 778999999999765
Q ss_pred ccCCCc-ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEAN-ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...... ....+++.|+|||.+.+. .++.++|+||+||++++|++|..||...+..+....+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~------------ 218 (256)
T cd08218 152 NSTVELARTCIGTPYYLSPEICENR-PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY------------ 218 (256)
T ss_pred CcchhhhhhccCCccccCHHHhCCC-CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC------------
Confidence 443221 234578889999998654 478899999999999999999999988776665554433100
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
...+..++.++.++|.+||+.||++||++.++++||||
T Consensus 219 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 219 ----------------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ----------------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 00123578899999999999999999999999999997
No 227
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.6e-43 Score=322.11 Aligned_cols=253 Identities=22% Similarity=0.356 Sum_probs=195.0
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCC-----cEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETG-----ETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFF 74 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~ 74 (353)
|.+..++|.+.+.||+|+||.||+|.+..++ +.||+|.+.... ....+|+.+++.+ +||||+++++++
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~- 111 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC- 111 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe-
Confidence 3455678999999999999999999865443 579999886432 2345799999999 899999999988
Q ss_pred ecCCCCceeEEEEecccc-chHHHHHHhhhh-------------------------------------------------
Q 018619 75 STTSKNELFLNLVMEYVP-ESMYRVLKHYSS------------------------------------------------- 104 (353)
Q Consensus 75 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------------------------------------------------- 104 (353)
.....+++|||||. |+|.+.+.....
T Consensus 112 ----~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (374)
T cd05106 112 ----THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV 187 (374)
T ss_pred ----cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence 33345889999998 567666643210
Q ss_pred -----------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 105 -----------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 105 -----------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
...++++..++.++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~giiHrDLkp~Nil~~~-~~~~kL~DfGla~~~~~~ 265 (374)
T cd05106 188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS-KNCIHRDVAARNVLLTD-GRVAKICDFGLARDIMND 265 (374)
T ss_pred cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCEEeccCchheEEEeC-CCeEEEeeceeeeeccCC
Confidence 12357889999999999999999999 79999999999999995 788999999999765433
Q ss_pred CCcc---eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 168 EANI---SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 168 ~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.... ...++..|+|||++.+ ..++.++||||+||++|+|++ |..||..................
T Consensus 266 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~----------- 333 (374)
T cd05106 266 SNYVVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ----------- 333 (374)
T ss_pred cceeeccCCCCccceeCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC-----------
Confidence 2211 1223567999999865 458999999999999999997 99999876554433333321000
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+..+++++.+++.+||+.||.+|||+.++++
T Consensus 334 ----------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 334 ----------------MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ----------------ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0012346889999999999999999999999864
No 228
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.8e-43 Score=310.40 Aligned_cols=249 Identities=16% Similarity=0.181 Sum_probs=197.3
Q ss_pred eecceeeEe--eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 8 LQTISYMAE--RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 8 ~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
+..+++... ..+|+|++|.||++.. +|+.||||.+.... ..+.+|+.+++.++||||+++++++.+..
T Consensus 15 i~~~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~- 91 (283)
T PHA02988 15 IESDDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV- 91 (283)
T ss_pred cCHHHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-
Confidence 334445444 6899999999999987 78999999886532 23358999999999999999999885422
Q ss_pred CCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 79 KNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
.+...+++||||+++ +|.+.+. ....+++.....++.|++.||.|||+..+++||||||+||+++. ++.+||+|
T Consensus 92 ~~~~~~~lv~Ey~~~g~L~~~l~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~-~~~~kl~d 166 (283)
T PHA02988 92 DDLPRLSLILEYCTRGYLREVLD----KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE-NYKLKIIC 166 (283)
T ss_pred cCCCceEEEEEeCCCCcHHHHHh----hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC-CCcEEEcc
Confidence 223457899999996 5655554 34678999999999999999999997238999999999999996 78999999
Q ss_pred eccccccccCCCcceeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 158 FGSAKQLIAGEANISYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 158 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
||++....... ....++..|+|||++.+. ..++.++|||||||++|+|++|..||.+.+..+....+......+.
T Consensus 167 fg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-- 242 (283)
T PHA02988 167 HGLEKILSSPP--FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK-- 242 (283)
T ss_pred cchHhhhcccc--ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC--
Confidence 99998654322 345678899999998652 4589999999999999999999999998876666555443211110
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
++...++++.+|+.+||+.||++|||++++++
T Consensus 243 -------------------------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 243 -------------------------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred -------------------------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 12347889999999999999999999999974
No 229
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=302.14 Aligned_cols=282 Identities=33% Similarity=0.575 Sum_probs=224.3
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
+-.+-||-|+||.||.+.+..+|+.||+|++..- .+..-+|+++|..++|.|+++..++.-...-..-..+|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 4457899999999999999999999999998643 2344589999999999999998877632222212236788
Q ss_pred eccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 88 MEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 88 ~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
+|++..+|-.++ ...+.++...+.-+++||++||+|||+ .+|.||||||.|+|+++ +..+||||||+++....+
T Consensus 136 TELmQSDLHKII----VSPQ~Ls~DHvKVFlYQILRGLKYLHs-A~ILHRDIKPGNLLVNS-NCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 136 TELMQSDLHKII----VSPQALTPDHVKVFVYQILRGLKYLHT-ANILHRDIKPGNLLVNS-NCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHhhhhhee----ccCCCCCcchhhhhHHHHHhhhHHHhh-cchhhccCCCccEEecc-CceEEecccccccccchh
Confidence 998887665554 357889999999999999999999999 79999999999999997 899999999999865544
Q ss_pred CC--cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCC
Q 018619 168 EA--NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 245 (353)
Q Consensus 168 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
+. .+..+-|-+|+|||++.|...|+.+.||||.|||+.|++..+..|+..++.+++..|.+.+|+|..+.++.-...-
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 33 2345668899999999999999999999999999999999999999999999999999999999999887543332
Q ss_pred CCCcCCCCCCCc-----cccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 246 TDFRFPQIKAHP-----WHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 246 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
..-.+..-...+ +.-.-+..-..+..+++.++|.+||++|++.++++.|++..+.+
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 211111100000 00001113345789999999999999999999999999987654
No 230
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-42 Score=308.29 Aligned_cols=262 Identities=26% Similarity=0.439 Sum_probs=203.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
++|+..+.||.|++|.||++.+..+++.||+|.+.... ....+|+.+++.++||||+++++++... ....+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEE
Confidence 57899999999999999999999999999999886432 2345899999999999999999887442 233578
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+.........+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++...
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~~ 155 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS-RKIIHRDIKPSNILLTR-KGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEec-CCeEEEeeccccccc
Confidence 99999985 6766665544556778999999999999999999999 79999999999999996 778999999998754
Q ss_pred ccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA-----VDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~ 239 (353)
..... ....++..|+|||.+.+ ..++.++|+||+||++|+|++|..||..... .+....+.. .....+
T Consensus 156 ~~~~~-~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~- 228 (287)
T cd06621 156 VNSLA-GTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPEL- 228 (287)
T ss_pred ccccc-ccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhh-
Confidence 33222 23456788999999855 4589999999999999999999999976522 121111111 000000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
+. . .......++.+.+||.+||+.||++|||+.|++.||||++..
T Consensus 229 -----------~~---~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 229 -----------KD---E---PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred -----------cc---C---CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 00 0 000012467899999999999999999999999999997653
No 231
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4e-43 Score=306.61 Aligned_cols=246 Identities=32% Similarity=0.516 Sum_probs=194.0
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHHHHH-HHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQL-MRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~~-l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|++|.||+|.+..+++.||+|.+.+... ....|..+ ....+|+|++++++++ .....+|+|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF-----QSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE-----EcCCeEEEEE
Confidence 578999999999999999999999998864321 11234333 3445899999999988 3344589999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+++ +|...+. ..+.+++..+..++.|++.||.|||+ .+++|+||+|+||+++. ++.+||+|||++.....
T Consensus 77 e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~~- 149 (260)
T cd05611 77 EYLNGGDCASLIK----TLGGLPEDWAKQYIAEVVLGVEDLHQ-RGIIHRDIKPENLLIDQ-TGHLKLTDFGLSRNGLE- 149 (260)
T ss_pred eccCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCcEEEeecccceeccc-
Confidence 99985 5555543 34678999999999999999999999 79999999999999996 78899999999875433
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
.....++..|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+.......+.....
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------- 210 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI---------------- 210 (260)
T ss_pred --cccCCCCcCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc----------------
Confidence 22345788899999986654 89999999999999999999999988776655444332100
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC---HHHHhcCcccccccC
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT---ALEACAHPFFDELRE 302 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t---~~~~l~hp~f~~~~~ 302 (353)
.|.......+++++.++|.+||+.||++||| ++|+++||||+++++
T Consensus 211 ---------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 211 ---------NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred ---------CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 0111122357899999999999999999995 579999999988764
No 232
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.5e-43 Score=308.80 Aligned_cols=249 Identities=28% Similarity=0.399 Sum_probs=192.4
Q ss_pred eeecCCCeEEEEEEECCCCcEEEEEEeecccc-------chHHHH---HHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 18 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNREL---QLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~E~---~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
.||+|+||.||+|.+..+++.||+|.+.+... ....|. .+++...||+|+.+.+.+ .....+|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 48999999999999999999999998865321 112233 344456799999998888 334458899
Q ss_pred eccccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 88 MEYVPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 88 ~e~~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|||+.|+ |...+ ...+.+++..++.++.|++.||+|||+ ++++||||||+||+++. ++.+||+|||++.....
T Consensus 76 ~e~~~g~~L~~~l----~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~nili~~-~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 76 LDLMNGGDLHYHL----SQHGVFSEAEMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDE-HGHVRISDLGLACDFSK 149 (278)
T ss_pred EecCCCCcHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEcCCCCHHHEEECC-CCCEEEccCcCccccCc
Confidence 9999864 44333 245679999999999999999999999 79999999999999996 78899999999875543
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.. .....|+..|+|||.+.+...++.++|+||+||++|+|++|..||.......... .......
T Consensus 150 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~-------------- 213 (278)
T cd05606 150 KK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT-------------- 213 (278)
T ss_pred cC-CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH-HHHHhhc--------------
Confidence 32 2345689999999998655458899999999999999999999997763221111 0000000
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCCC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREPN 304 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~~ 304 (353)
....++...+.++.+++.+||..||.+|+ ++.++++||||+...+..
T Consensus 214 -----------~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~ 265 (278)
T cd05606 214 -----------MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQM 265 (278)
T ss_pred -----------cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchH
Confidence 00112334689999999999999999999 999999999999876543
No 233
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.6e-43 Score=313.18 Aligned_cols=252 Identities=29% Similarity=0.443 Sum_probs=204.5
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
...+|.+.+.||+|++|.||++.+..+++.||+|.+.... ....+|+.+++.++|||++++.+++.. .
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~ 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-----E 87 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----C
Confidence 3567999999999999999999999999999999885321 234579999999999999999998843 3
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
...|+||||+.|++.+.+.. ....+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++
T Consensus 88 ~~~~lv~e~~~g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~-~~i~H~dl~p~nIl~~~-~~~~kL~dfg~~ 162 (307)
T cd06607 88 HTAWLVMEYCLGSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHS-HERIHRDIKAGNILLTE-PGTVKLADFGSA 162 (307)
T ss_pred CeEEEEHHhhCCCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEECC-CCCEEEeecCcc
Confidence 34889999999987776653 23568999999999999999999999 79999999999999996 788999999998
Q ss_pred cccccCCCcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
...... ....+++.|+|||++.+ ...++.++||||+|+++|+|++|..||...+.......+... .+
T Consensus 163 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~------ 231 (307)
T cd06607 163 SLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DS------ 231 (307)
T ss_pred eecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CC------
Confidence 754332 23467888999998742 345788999999999999999999999877665544333221 00
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
+.. .....+.++.++|.+||+.||.+|||+.+++.||||..-
T Consensus 232 -----------~~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 232 -----------PTL--------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred -----------CCC--------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 000 012357889999999999999999999999999999863
No 234
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=3.1e-44 Score=317.50 Aligned_cols=283 Identities=32% Similarity=0.531 Sum_probs=230.5
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcC------CCceeecceeeeecCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMD------HPNVISLKHCFFSTTS 78 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~ 78 (353)
+.-.+|.+....|.|-|++|..|.+..-|..||||++.... +...+|+.+|++|+ --|.+.++..|
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F----- 503 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF----- 503 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh-----
Confidence 33579999999999999999999999999999999997664 34458999999995 34788888888
Q ss_pred CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 79 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
.....+|+|+|-+.-+|.++|..+. .+-.|....++.|+.||..||..|.. .||+|.||||+||||++....+|||||
T Consensus 504 ~hknHLClVFE~LslNLRevLKKyG-~nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 504 KHKNHLCLVFEPLSLNLREVLKKYG-RNVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred hhcceeEEEehhhhchHHHHHHHhC-cccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEeccCcceeeeccC
Confidence 5566699999999999999998865 35568899999999999999999999 799999999999999988889999999
Q ss_pred ccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 159 GSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 159 g~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
|.|.....++ .+.+..+..|+|||+++|.+ |+...|+||+||.||||.||+..|++.++..++.-.+..-|..+...+
T Consensus 582 GSA~~~~ene-itPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 582 GSASFASENE-ITPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred cccccccccc-ccHHHHHHhccCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 9998765544 34567788999999999876 999999999999999999999999999999999999999999988777
Q ss_pred hhc-------Cc--CCCCCcCCCCCCC-------------ccccccCC--CCC-------hhHHHHHHHhcCcCCCCCCC
Q 018619 239 RCM-------NP--NYTDFRFPQIKAH-------------PWHKVFHK--RMP-------PEAIDLASRLLQYSPSLRCT 287 (353)
Q Consensus 239 ~~~-------~~--~~~~~~~~~~~~~-------------~~~~~~~~--~~~-------~~~~~li~~~L~~dp~~R~t 287 (353)
++- +. ++...+....... .+...+.. .++ ..+++|+.+||..||++|.|
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 632 11 1111111111110 11111110 122 35889999999999999999
Q ss_pred HHHHhcCccccc
Q 018619 288 ALEACAHPFFDE 299 (353)
Q Consensus 288 ~~~~l~hp~f~~ 299 (353)
+.|+|.||||..
T Consensus 740 ~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 740 VNQALKHPFITE 751 (752)
T ss_pred HHHHhcCCcccC
Confidence 999999999974
No 235
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-44 Score=320.53 Aligned_cols=240 Identities=28% Similarity=0.444 Sum_probs=203.4
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEecccc-
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP- 92 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~- 92 (353)
.-++-||+|+.|.||+++. .++.||||++.. ..+.+++-|++|+||||+.+.+++ ....++|||||||.
T Consensus 127 sELeWlGSGaQGAVF~Grl--~netVAVKKV~e---lkETdIKHLRkLkH~NII~FkGVC-----tqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRL--HNETVAVKKVRE---LKETDIKHLRKLKHPNIITFKGVC-----TQSPCYCIIMEFCAQ 196 (904)
T ss_pred hhhhhhccCcccceeeeec--cCceehhHHHhh---hhhhhHHHHHhccCcceeeEeeee-----cCCceeEEeeecccc
Confidence 3456799999999999875 788999998743 334679999999999999999999 56667999999999
Q ss_pred chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCcce
Q 018619 93 ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS 172 (353)
Q Consensus 93 ~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~ 172 (353)
|-|+++|+ ....++......|..+|+.|+.|||. +.|||||||.-||||.. +..|||+|||.++.........+
T Consensus 197 GqL~~VLk----a~~~itp~llv~Wsk~IA~GM~YLH~-hKIIHRDLKSPNiLIs~-~d~VKIsDFGTS~e~~~~STkMS 270 (904)
T KOG4721|consen 197 GQLYEVLK----AGRPITPSLLVDWSKGIAGGMNYLHL-HKIIHRDLKSPNILISY-DDVVKISDFGTSKELSDKSTKMS 270 (904)
T ss_pred ccHHHHHh----ccCccCHHHHHHHHHHhhhhhHHHHH-hhHhhhccCCCceEeec-cceEEeccccchHhhhhhhhhhh
Confidence 67777776 57889999999999999999999999 89999999999999996 77899999999998888877888
Q ss_pred eeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCC
Q 018619 173 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 252 (353)
Q Consensus 173 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (353)
+.||..|||||++.. ++.+.++|||||||+||||+||..||..-+...++ +|.
T Consensus 271 FaGTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII------wGV-------------------- 323 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII------WGV-------------------- 323 (904)
T ss_pred hhhhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchheeE------Eec--------------------
Confidence 999999999999965 56999999999999999999999999876543222 111
Q ss_pred CCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 253 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..+..+-.++..+++-++=||++||+-.|..||+..++|.|==+
T Consensus 324 -GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 324 -GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred -cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 11223334556788899999999999999999999999988433
No 236
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=9.3e-43 Score=305.52 Aligned_cols=248 Identities=25% Similarity=0.350 Sum_probs=191.9
Q ss_pred ceeeEeeee--ecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEE
Q 018619 11 ISYMAERVV--GTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 11 ~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
++|.+.+.+ |+|+||.||++.++.+++.+|+|.+...... ..|+.....+ +|||++++++.|.. ...+|+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~e~~~~~~~~~h~~iv~~~~~~~~-----~~~~~iv 87 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-AIEPMVHQLMKDNPNFIKLYYSVTT-----LKGHVLI 87 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-hhhHHHHHHhhcCCCEEEEEEEEec-----CCeeEEE
Confidence 456666666 9999999999999999999999988654322 1234333333 79999999998843 3358999
Q ss_pred ecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 88 MEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 88 ~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|||++ ++|.+.+.. ...+++..++.++.|++.||+|||+ .|++||||||+||+++..++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 162 (267)
T PHA03390 88 MDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHK-HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT 162 (267)
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC
Confidence 99998 577666643 3489999999999999999999999 79999999999999997443899999999875533
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCCCCHHHHhhcCcCC
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL-VEIIKVLGTPTREEIRCMNPNY 245 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
. ....++..|+|||++.+. .++.++|+||+||++|+|++|..||......... .........
T Consensus 163 ~---~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 225 (267)
T PHA03390 163 P---SCYDGTLDYFSPEKIKGH-NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK------------- 225 (267)
T ss_pred C---ccCCCCCcccChhhhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc-------------
Confidence 2 234578899999999654 4889999999999999999999999865433221 111111000
Q ss_pred CCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-HHHHhcCccccc
Q 018619 246 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-ALEACAHPFFDE 299 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-~~~~l~hp~f~~ 299 (353)
.....+.+++.+.+||.+||+.||.+|++ .+++|+||||.+
T Consensus 226 -------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 226 -------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred -------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 00112357999999999999999999996 599999999973
No 237
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.5e-43 Score=306.51 Aligned_cols=251 Identities=29% Similarity=0.526 Sum_probs=201.5
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
++|++.+.||+|++|.||++.++.+++.+|+|.+.... ....+|+.+++.++||||+++++.+.. ...++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-----NGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-----CCEEE
Confidence 46889999999999999999999999999999886542 234579999999999999999998833 35588
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+++||++ ++|.+.+... ...+++..+..++.|++.||+|||+..|++|+||||+||+++. ++.++|+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~-~~~~~l~d~g~~~~~ 151 (265)
T cd06605 76 ICMEYMDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS-RGQIKLCDFGVSGQL 151 (265)
T ss_pred EEEEecCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC-CCCEEEeecccchhh
Confidence 9999999 5666665532 2678999999999999999999999339999999999999996 788999999998765
Q ss_pred ccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCCHHHHh
Q 018619 165 IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-----AVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~ 239 (353)
...... ...++..|+|||.+.+. .++.++|+||+||++|+|++|..||...+ ..+....+.. .+.
T Consensus 152 ~~~~~~-~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~----- 221 (265)
T cd06605 152 VNSLAK-TFVGTSSYMAPERIQGN-DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN---EPP----- 221 (265)
T ss_pred HHHHhh-cccCChhccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc---CCC-----
Confidence 433222 26678899999998664 58999999999999999999999997652 1122211111 000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCC-CCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHK-RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
+ .++. .++.++.++|.+||..||.+|||+.+++.||||+++
T Consensus 222 -----------~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 222 -----------P---------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred -----------C---------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 0 0111 268899999999999999999999999999999875
No 238
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.4e-42 Score=310.26 Aligned_cols=255 Identities=20% Similarity=0.258 Sum_probs=193.3
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECC----------------CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCcee
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLE----------------TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVI 67 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv 67 (353)
..++|++.+.||+|+||.||+|.+.. ++..||+|.+.... ..+.+|+.++..++||||+
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCee
Confidence 46789999999999999999997532 34579999886432 2345799999999999999
Q ss_pred ecceeeeecCCCCceeEEEEecccc-chHHHHHHhhhh---------------cCCCCCHHHHHHHHHHHHHHHHHhHcC
Q 018619 68 SLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSS---------------ANQRMPLIYVKLYTYQIFRGLAYIHTV 131 (353)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~---------------~~~~l~~~~~~~i~~qll~al~~LH~~ 131 (353)
++++++... ...++||||+. ++|.+.+..... ....+++..++.++.||+.||+|||+
T Consensus 83 ~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~- 156 (304)
T cd05096 83 RLLGVCVDE-----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS- 156 (304)
T ss_pred EEEEEEecC-----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH-
Confidence 999988432 34889999998 477766644211 12347888899999999999999999
Q ss_pred CCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHH
Q 018619 132 PRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 208 (353)
Q Consensus 132 ~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~ 208 (353)
+||+||||||+|||++. ++.+||+|||++......... ....++..|+|||++.+. .++.++|||||||++|+|+
T Consensus 157 ~~ivH~dlkp~Nill~~-~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 157 LNFVHRDLATRNCLVGE-NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG-KFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred CCccccCcchhheEEcC-CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcC-CCCchhhhHHHHHHHHHHH
Confidence 79999999999999996 788999999999865433221 122346789999998654 4899999999999999998
Q ss_pred h--CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC
Q 018619 209 L--GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 286 (353)
Q Consensus 209 ~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 286 (353)
+ +..||...+..+............... .....+..++..+.+|+.+||+.||.+||
T Consensus 235 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~li~~cl~~~p~~RP 293 (304)
T cd05096 235 MLCKEQPYGELTDEQVIENAGEFFRDQGRQ---------------------VYLFRPPPCPQGLYELMLQCWSRDCRERP 293 (304)
T ss_pred HccCCCCCCcCCHHHHHHHHHHHhhhcccc---------------------ccccCCCCCCHHHHHHHHHHccCCchhCc
Confidence 6 568888776655554433321110000 00001234688999999999999999999
Q ss_pred CHHHHh
Q 018619 287 TALEAC 292 (353)
Q Consensus 287 t~~~~l 292 (353)
|+.++.
T Consensus 294 s~~~i~ 299 (304)
T cd05096 294 SFSDIH 299 (304)
T ss_pred CHHHHH
Confidence 999984
No 239
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2e-42 Score=301.54 Aligned_cols=249 Identities=27% Similarity=0.425 Sum_probs=201.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||++.++.+|..||+|.+... .....+|+.+++.++|+|++++++.+ ......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 589999999999999999999999999999988543 23445899999999999999999987 3444588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+++||+.+ +|.+.+.. .....+++..+..++.|++.||.|||+ ++++|+||||+||++++++..+||+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (257)
T cd08225 76 IVMEYCDGGDLMKRINR--QRGVLFSEDQILSWFVQISLGLKHIHD-RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152 (257)
T ss_pred EEEecCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence 99999975 66665543 123458999999999999999999999 799999999999999874456899999998765
Q ss_pred ccCCCc-ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEAN-ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...... ....+++.|+|||.+.+. .++.++|+||+||++++|++|..||...+..+....+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------ 219 (257)
T cd08225 153 NDSMELAYTCVGTPYYLSPEICQNR-PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF------------ 219 (257)
T ss_pred cCCcccccccCCCccccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC------------
Confidence 443322 234578889999988554 488999999999999999999999987766554443322100
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..+...++.++.++|.+||+.+|++|||+.++++||||
T Consensus 220 ----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 220 ----------------APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 00123468899999999999999999999999999997
No 240
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.8e-43 Score=310.59 Aligned_cols=250 Identities=28% Similarity=0.414 Sum_probs=201.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+.|...+.||+|++|.||++.+..+++.||+|.+.... ....+|+.+++.++||||+++++++. ....+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-----KGTKLW 78 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-----cCCceE
Confidence 46788899999999999999999999999999886332 23468999999999999999999883 344588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ ++.+.+. .+.+++..++.++.|++.|+.|||+ +|++|+||+|+||+++. ++.++|+|||++...
T Consensus 79 lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p~ni~i~~-~~~~~l~dfg~~~~~ 151 (277)
T cd06642 79 IIMEYLGGGSALDLLK-----PGPLEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLLSE-QGDVKLADFGVAGQL 151 (277)
T ss_pred EEEEccCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhc-CCeeccCCChheEEEeC-CCCEEEccccccccc
Confidence 99999996 5544442 3578999999999999999999999 79999999999999996 788999999998765
Q ss_pred ccCCCc-ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEAN-ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...... ....++..|+|||.+.+. .++.++|+||+||++|+|++|..||...........+...
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-------------- 216 (277)
T cd06642 152 TDTQIKRNTFVGTPFWMAPEVIKQS-AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-------------- 216 (277)
T ss_pred cCcchhhhcccCcccccCHHHhCcC-CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC--------------
Confidence 443221 234578889999998654 5889999999999999999999999765544332211110
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
....+...++.++.++|.+||+.||++|||+.++++||||....
T Consensus 217 --------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 217 --------------SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred --------------CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 00012234688999999999999999999999999999998754
No 241
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.1e-42 Score=302.44 Aligned_cols=252 Identities=28% Similarity=0.463 Sum_probs=196.0
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
++......||+|+||.||++.+..++..||+|.+.... ....+|+.+++.++|+||+++++++. .....++
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 82 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----ENGFFKI 82 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----cCCEEEE
Confidence 34445568999999999999999999999999886432 34568999999999999999998873 3345889
Q ss_pred Eeccccc-hHHHHHHhhhhcCCCC--CHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 87 VMEYVPE-SMYRVLKHYSSANQRM--PLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 87 v~e~~~~-~l~~~l~~~~~~~~~l--~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++||+.+ +|...+.. ....+ ++..+..++.|++.||+|||+ +||+||||||+||+++..++.++|+|||++..
T Consensus 83 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRS---KWGPLKDNEQTIIFYTKQILEGLKYLHD-NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHH---hcccCCCcHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999985 66666543 12344 788889999999999999999 79999999999999986567899999999876
Q ss_pred cccCCC-cceeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 164 LIAGEA-NISYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 164 ~~~~~~-~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... .....+++.|+|||.+.+. ..++.++|+||+|+++|+|++|..||...+.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 228 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK---------- 228 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc----------
Confidence 543222 2234578899999998543 3478899999999999999999999976443221111000000
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
....++..+++++.+|+++||+.+|.+|||+.+++.||||
T Consensus 229 ----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 ----------------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ----------------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0111234578899999999999999999999999999997
No 242
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.7e-42 Score=301.84 Aligned_cols=251 Identities=32% Similarity=0.511 Sum_probs=205.6
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
++|++.+.||+|++|.||+|.+..+++.|++|++.... ....+|+..+..++|+|++++++.+. ....++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEE
Confidence 47899999999999999999999999999999886542 34568999999999999999999883 335588
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHc-CCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHT-VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~-~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+||||++ ++|.+.+.. ...+++..++.++.|++.|++|||+ . +++|+||+|+||+++. ++.++|+|||.+..
T Consensus 76 lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~-~~~~~l~df~~~~~ 149 (264)
T cd06623 76 IVLEYMDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINS-KGEVKIADFGISKV 149 (264)
T ss_pred EEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECC-CCCEEEccCcccee
Confidence 9999999 566666543 3779999999999999999999998 6 9999999999999996 78899999999987
Q ss_pred cccCCCcc-eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCCHHHHh
Q 018619 164 LIAGEANI-SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---AVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 164 ~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~ 239 (353)
........ ...++..|+|||.+.+. .++.++|+||||+++|+|++|..||...+ ..+....+.. ...
T Consensus 150 ~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~~----- 220 (264)
T cd06623 150 LENTLDQCNTFVGTVTYMSPERIQGE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GPP----- 220 (264)
T ss_pred cccCCCcccceeecccccCHhhhCCC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CCC-----
Confidence 65444332 45678899999998554 58899999999999999999999997774 2222222211 000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCC-CChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
..+... ++..+.++|++||..+|++|||+.++++||||+..+
T Consensus 221 --------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 221 --------------------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred --------------------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 001123 788999999999999999999999999999998753
No 243
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-42 Score=318.32 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=194.6
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEE-----CCCCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeeee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKC-----LETGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFFS 75 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 75 (353)
.+..++|++.+.||+|+||.||+|.+ ..++..||+|++.... ....+|+.+++.+ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~-- 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC-- 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee--
Confidence 34456899999999999999999974 3467789999885432 2345799999999 899999999988
Q ss_pred cCCCCceeEEEEecccc-chHHHHHHhhhh--------------------------------------------------
Q 018619 76 TTSKNELFLNLVMEYVP-ESMYRVLKHYSS-------------------------------------------------- 104 (353)
Q Consensus 76 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~-------------------------------------------------- 104 (353)
......++|||||+ |+|.+.+.....
T Consensus 109 ---~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (375)
T cd05104 109 ---TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADK 185 (375)
T ss_pred ---ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccc
Confidence 33344889999998 577666643210
Q ss_pred ---------------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 105 ---------------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 105 ---------------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
....+++..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~ 263 (375)
T cd05104 186 RRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS-KNCIHRDLAARNILLTH-GRITKICDFGLARD 263 (375)
T ss_pred ccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCchhhEEEEC-CCcEEEecCcccee
Confidence 12357889999999999999999999 79999999999999996 77899999999986
Q ss_pred cccCCCcc---eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 164 LIAGEANI---SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 164 ~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
........ ...++..|+|||++.+. .++.++|||||||++|+|++ |..||..........+.+.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~------- 335 (375)
T cd05104 264 IRNDSNYVVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR------- 335 (375)
T ss_pred ccCcccccccCCCCCCcceeChhHhcCC-CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc-------
Confidence 54332211 12235679999999654 58999999999999999997 89999876554444333321000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
...+...+.++.+||.+||+.||++|||+.++++.
T Consensus 336 --------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 336 --------------------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred --------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 00112357899999999999999999999999753
No 244
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.4e-43 Score=315.24 Aligned_cols=279 Identities=20% Similarity=0.305 Sum_probs=199.0
Q ss_pred eeeeecC--CCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 16 ERVVGTG--SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 16 ~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
...||.| +||+||+|++..+|+.||+|++.... ....+|+.+++.++||||++++++|. .....++|
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~v 77 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWVI 77 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEEE
Confidence 3466776 99999999999999999999886432 33457888999999999999999983 34458899
Q ss_pred eccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 88 MEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 88 ~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
+||+.+ ++.+.+... ....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.++++||+.+.....
T Consensus 78 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivHrDlkp~Nill~~-~~~~~~~~~~~~~~~~~ 153 (328)
T cd08226 78 SPFMAYGSANSLLKTY--FPEGMSEALIGNILFGALRGLNYLHQ-NGYIHRNIKASHILISG-DGLVSLSGLSHLYSLVR 153 (328)
T ss_pred EecccCCCHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEeC-CCcEEEechHHHhhhhc
Confidence 999995 666666543 23458999999999999999999999 79999999999999996 78899999986543322
Q ss_pred CCCcc--------eeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH-
Q 018619 167 GEANI--------SYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE- 236 (353)
Q Consensus 167 ~~~~~--------~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 236 (353)
..... ...++..|+|||++.+. ..++.++||||+||++|+|++|..||...................+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd08226 154 NGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDI 233 (328)
T ss_pred cCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccc
Confidence 11110 11235569999998653 347899999999999999999999998876655443333211110000
Q ss_pred --------HHhhcCcCCC----CCcC-----CCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 237 --------EIRCMNPNYT----DFRF-----PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 237 --------~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
.......... +... .......+........++.+.+||++||+.||++|||++++++||||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 0000000000 0000 0001111122223346788999999999999999999999999999998
Q ss_pred ccCC
Q 018619 300 LREP 303 (353)
Q Consensus 300 ~~~~ 303 (353)
.+..
T Consensus 314 ~~~~ 317 (328)
T cd08226 314 VKEQ 317 (328)
T ss_pred HHHh
Confidence 7654
No 245
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.2e-42 Score=306.50 Aligned_cols=249 Identities=27% Similarity=0.410 Sum_probs=202.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
..|...+.||.|+||.||.|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++. +...+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCEEE
Confidence 46888999999999999999999999999999886432 23457999999999999999999883 344589
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+. .+++++..+..++.|++.||+|||+ ++++|+||+|+||+++. ++.++|+|||++...
T Consensus 79 lv~e~~~~~~L~~~i~-----~~~l~~~~~~~~~~~l~~~l~~lh~-~~ivH~dl~p~Nil~~~-~~~~~l~dfg~~~~~ 151 (277)
T cd06640 79 IIMEYLGGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLHS-EKKIHRDIKAANVLLSE-QGDVKLADFGVAGQL 151 (277)
T ss_pred EEEecCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCccCcCCChhhEEEcC-CCCEEEcccccceec
Confidence 99999986 5555543 2568999999999999999999999 79999999999999996 788999999999765
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..... .....++..|+|||.+.+. ..+.++|+||+||++|+|++|..||...+.......+... ..
T Consensus 152 ~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~----------- 218 (277)
T cd06640 152 TDTQIKRNTFVGTPFWMAPEVIQQS-AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN-NP----------- 218 (277)
T ss_pred cCCccccccccCcccccCHhHhccC-CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC-CC-----------
Confidence 44332 2234578889999998654 4889999999999999999999999876654433221110 00
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
..+...++..+.++|.+||+.||.+||++.++++||||...
T Consensus 219 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 219 ----------------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred ----------------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 01223467889999999999999999999999999999764
No 246
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.4e-42 Score=299.84 Aligned_cols=250 Identities=28% Similarity=0.458 Sum_probs=206.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||++.+..+++.|++|++.... ....+|+++++.++|||++++.+.+.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-----~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-----KGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-----CCEEE
Confidence 5899999999999999999999999999999986432 234579999999999999999998843 34588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+++|++++ +|.+.+.........+++..+..++.|++.||.+||+ +|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~H~dl~~~nil~~~-~~~~~l~d~~~~~~~ 153 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS-RKILHRDIKPQNIFLTS-NGLVKLGDFGISKVL 153 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHHeEEcC-CCcEEECCccceeec
Confidence 99999985 7777776544445789999999999999999999999 79999999999999996 788999999999865
Q ss_pred ccCC-CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGE-ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.... ......+++.|+|||.+.+. .++.++|+||+|+++++|++|..||...+..+..........
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------------ 220 (258)
T cd08215 154 SSTVDLAKTVVGTPYYLSPELCQNK-PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY------------ 220 (258)
T ss_pred ccCcceecceeeeecccChhHhccC-CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC------------
Confidence 5443 22345678899999998654 488999999999999999999999987775544443322100
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..++...+.++.+++++||..||++|||+.++++||||
T Consensus 221 ----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 ----------------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 00123478899999999999999999999999999997
No 247
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-42 Score=307.36 Aligned_cols=256 Identities=29% Similarity=0.475 Sum_probs=200.7
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
..++|++.+.||+|+||.||++.+..+++.||+|++.... ....+|+.+++.++||||+++++.+.. ...
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~ 77 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-----ENN 77 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-----CCE
Confidence 4578999999999999999999999999999999875432 234579999999999999999998843 345
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+++||||+++ +|...+. ..+.+++..++.++.|++.||.|||+.++++|+||||+||+++. ++.++|+|||++.
T Consensus 78 ~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~-~~~~~l~d~gl~~ 152 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYK----KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS-RGQIKLCDFGVSG 152 (284)
T ss_pred EEEEEecCCCCCHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC-CCcEEEccCCccc
Confidence 8899999996 4444443 34678999999999999999999996348999999999999996 7889999999987
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHH-------HHHHHHHhCCCCH
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ-------LVEIIKVLGTPTR 235 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~~~ 235 (353)
...... .....++..|+|||.+.+. .++.++|+||+||++|+|++|..||......+. +...........
T Consensus 153 ~~~~~~-~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (284)
T cd06620 153 ELINSI-ADTFVGTSTYMSPERIQGG-KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP- 229 (284)
T ss_pred chhhhc-cCccccCcccCCHHHHccC-CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-
Confidence 543222 2245688999999998654 588999999999999999999999986554211 001111000000
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccC-CCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFH-KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.+ .++ ..++.++.+|+.+||+.||.+|||++++++||||.+-
T Consensus 230 --------------~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 230 --------------PP---------RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred --------------CC---------CCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00 001 1267889999999999999999999999999999663
No 248
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.5e-42 Score=300.72 Aligned_cols=245 Identities=27% Similarity=0.455 Sum_probs=199.0
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
+|++.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++|||++++++.+ .....+|+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 5899999999999999999999999999999885322 2345789999999999999999988 34446899
Q ss_pred Eeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 87 VMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 87 v~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+|||+++ ++.+.+.. .....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||.+....
T Consensus 76 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 76 VMEYCDGGDLMQKIKL--QRGKLFPEDTILQWFVQMCLGVQHIHE-KRVLHRDIKSKNIFLTQ-NGKVKLGDFGSARLLT 151 (255)
T ss_pred EEeeCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEECC-CCcEEEcccCcceeec
Confidence 9999985 66655543 234568999999999999999999999 79999999999999996 7889999999987654
Q ss_pred cCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 166 AGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 166 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
.... .....+++.|+|||++.+. .++.++|+||+|+++|+|++|..||...+.......+.....
T Consensus 152 ~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~------------- 217 (255)
T cd08219 152 SPGAYACTYVGTPYYVPPEIWENM-PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY------------- 217 (255)
T ss_pred ccccccccccCCccccCHHHHccC-CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC-------------
Confidence 3322 2345678899999998554 489999999999999999999999988776555443332100
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
..++..++..+.+||.+||+.||.+|||+.++++-
T Consensus 218 ---------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 ---------------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---------------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00123468899999999999999999999999864
No 249
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2e-42 Score=308.00 Aligned_cols=253 Identities=26% Similarity=0.425 Sum_probs=201.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc----ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
..|.....||+|+||.||++.+..+++.||+|.+... .....+|+.+++.++|||++++++.+.. ....|+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~i 95 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-----GEELWV 95 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-----CCeEEE
Confidence 3455667899999999999999999999999988532 2234578999999999999999998843 345889
Q ss_pred Eeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 87 VMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 87 v~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
++||+++ ++...+. ...+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||++....
T Consensus 96 v~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dl~p~Nill~~-~~~~kL~dfg~~~~~~ 168 (297)
T cd06659 96 LMEFLQGGALTDIVS-----QTRLNEEQIATVCESVLQALCYLHS-QGVIHRDIKSDSILLTL-DGRVKLSDFGFCAQIS 168 (297)
T ss_pred EEecCCCCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHeEEcc-CCcEEEeechhHhhcc
Confidence 9999996 4444332 3568999999999999999999999 79999999999999996 7889999999987554
Q ss_pred cCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 166 AGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 166 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
.... .....++..|+|||.+.+. .++.++|+||+||++|+|++|..||...+..+....+... +. .
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~-~-------- 235 (297)
T cd06659 169 KDVPKRKSLVGTPYWMAPEVISRT-PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PP-P-------- 235 (297)
T ss_pred cccccccceecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CC-C--------
Confidence 3322 2345688999999998654 4899999999999999999999999877665554332210 00 0
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
.+ .....++.++.++|++||+.||.+||++.++++||||.+...
T Consensus 236 ------------~~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 236 ------------KL--KNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred ------------Cc--cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 00 011347889999999999999999999999999999987543
No 250
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.8e-42 Score=308.26 Aligned_cols=262 Identities=24% Similarity=0.381 Sum_probs=203.1
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeeeecCCC
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 79 (353)
+.+..++|.+.+.||+|++|.||++.+..+++.||+|.+.+.. ....+|+.++... +||||+++++++.
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~----- 84 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI----- 84 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-----
Confidence 4567789999999999999999999999899999999986432 1223466555555 5999999999883
Q ss_pred CceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 80 NELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 80 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
.....|++|||+++.+...+.. ....+++..+..++.|++.||+|||+..||+||||+|+||+++. ++.+||+|||
T Consensus 85 ~~~~~~~v~e~~~~~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~-~~~~kL~dfg 160 (296)
T cd06618 85 TDSDVFICMELMSTCLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA-SGNVKLCDFG 160 (296)
T ss_pred cCCeEEEEeeccCcCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC-CCCEEECccc
Confidence 3345889999998876665543 24578999999999999999999997249999999999999996 7899999999
Q ss_pred cccccccCCCcceeeeeceeeChhhhhCC---CCCCccccchhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCH
Q 018619 160 SAKQLIAGEANISYICSRFYRAPELIFGA---TEYTTSIDIWSAGCVLAELLLGQPLFPGENAV-DQLVEIIKVLGTPTR 235 (353)
Q Consensus 160 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 235 (353)
++.............++..|+|||.+.+. ..++.++|+||+|+++|+|++|+.||...... +.+..+... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~- 236 (296)
T cd06618 161 ISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE---EP- 236 (296)
T ss_pred cchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC---CC-
Confidence 98765544333344577889999998543 24788999999999999999999999764332 222222211 00
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
. ..+ ....++.++.+|+.+||+.||.+|||+++++.||||...+.
T Consensus 237 ----------~--~~~----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 237 ----------P--SLP----------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred ----------C--CCC----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 0 000 01136889999999999999999999999999999987543
No 251
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.9e-42 Score=303.39 Aligned_cols=247 Identities=19% Similarity=0.225 Sum_probs=193.9
Q ss_pred eecceeeEeeeeecCCCeEEEEEEEC---CCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
+..++|.+.+.||+|+||.||++..+ ..+..||+|.+.... ..+.+|+.+++.++||||+++++++..
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---- 77 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR---- 77 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec----
Confidence 35678999999999999999999765 346789999886432 234579999999999999999998743
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
....++||||+++ +|.+.+.. ....+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+|++||
T Consensus 78 -~~~~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~i~~al~~lH~-~~iiH~dikp~nili~~-~~~~~l~df 151 (266)
T cd05064 78 -GNTMMIVTEYMSNGALDSFLRK---HEGQLVAGQLMGMLPGLASGMKYLSE-MGYVHKGLAAHKVLVNS-DLVCKISGF 151 (266)
T ss_pred -CCCcEEEEEeCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeeccccHhhEEEcC-CCcEEECCC
Confidence 3348899999996 45444432 24578999999999999999999999 79999999999999996 788999999
Q ss_pred ccccccccCCCcc--eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 159 GSAKQLIAGEANI--SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 159 g~a~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
|.+.......... ...++..|+|||.+.+ ..++.++||||+||++|++++ |..||...+..+.+..+.+....
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~--- 227 (266)
T cd05064 152 RRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL--- 227 (266)
T ss_pred cccccccccchhcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---
Confidence 9876432221111 1234578999999865 458999999999999999774 99999887766655444221000
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+..++..+.+++.+||+.||.+|||++++++
T Consensus 228 -------------------------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 228 -------------------------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -------------------------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 012357889999999999999999999999864
No 252
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.5e-42 Score=308.08 Aligned_cols=251 Identities=29% Similarity=0.451 Sum_probs=204.1
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
.+.|...+.||+|+||.||++++..+++.|++|++.... ....+|+.+++.++|||++++++++.. ..
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 94 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-----EH 94 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CC
Confidence 345777888999999999999999999999999886421 234578999999999999999998843 34
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
..|+||||+.+++.+.+.. ....+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||++.
T Consensus 95 ~~~lv~e~~~~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dl~p~nili~~-~~~~kL~dfg~~~ 169 (313)
T cd06633 95 TAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTE-PGQVKLADFGSAS 169 (313)
T ss_pred EEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCChhhEEECC-CCCEEEeecCCCc
Confidence 5889999999987776653 34678999999999999999999999 79999999999999986 7889999999986
Q ss_pred ccccCCCcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 163 QLIAGEANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
.... .....++..|+|||.+.. ...++.++|+||+||++|+|++|..||...+.......+... ..+
T Consensus 170 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~~~------- 238 (313)
T cd06633 170 KSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSP------- 238 (313)
T ss_pred ccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-CCC-------
Confidence 4322 234567889999999742 244788999999999999999999999887766555544321 000
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
. .....++..+++|+.+||+.||.+||++.++++||||+..
T Consensus 239 -----------~--------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 239 -----------T--------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred -----------C--------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 0 0112357789999999999999999999999999999864
No 253
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.8e-42 Score=304.37 Aligned_cols=260 Identities=25% Similarity=0.327 Sum_probs=201.2
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFS 75 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~ 75 (353)
|-+..++|.+.+.||+|+||.||++.++. .+..||+|.+.... ....+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~- 79 (288)
T cd05061 1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS- 79 (288)
T ss_pred CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-
Confidence 34667899999999999999999987652 34579999875432 12346889999999999999999873
Q ss_pred cCCCCceeEEEEecccc-chHHHHHHhhhhc------CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC
Q 018619 76 TTSKNELFLNLVMEYVP-ESMYRVLKHYSSA------NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP 148 (353)
Q Consensus 76 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~------~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~ 148 (353)
.....|+||||+. |+|.+.+...... ...++...+..++.|++.||.|||+ ++++||||||+||+++.
T Consensus 80 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili~~ 154 (288)
T cd05061 80 ----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMVAH 154 (288)
T ss_pred ----CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEEcC
Confidence 3334789999998 5777777543211 2345677889999999999999999 89999999999999996
Q ss_pred CCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 018619 149 LTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLV 224 (353)
Q Consensus 149 ~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~ 224 (353)
++.++|+|||+++........ ....++..|+|||.+.+. .++.++|+||+||++|+|++ |..||.+.+..+...
T Consensus 155 -~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~ 232 (288)
T cd05061 155 -DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 232 (288)
T ss_pred -CCcEEECcCCccccccccccccccCCCcccccccCHHHhccC-CCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 788999999998754332211 122346679999998654 48999999999999999998 789998877655443
Q ss_pred HHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc------Ccccc
Q 018619 225 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA------HPFFD 298 (353)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~------hp~f~ 298 (353)
.+... +.+ .++...++.+.+++.+||+.||.+|||+.++++ ||||+
T Consensus 233 ~~~~~-~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~ 284 (288)
T cd05061 233 FVMDG-GYL---------------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 284 (288)
T ss_pred HHHcC-CCC---------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence 33221 000 012346789999999999999999999999986 99998
Q ss_pred ccc
Q 018619 299 ELR 301 (353)
Q Consensus 299 ~~~ 301 (353)
.+.
T Consensus 285 ~~~ 287 (288)
T cd05061 285 EVS 287 (288)
T ss_pred CCC
Confidence 764
No 254
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.6e-42 Score=300.14 Aligned_cols=249 Identities=28% Similarity=0.494 Sum_probs=200.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc---------ccchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD---------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
.+|++.+.||+|++|.||++.+..+++.||+|.+... ...+.+|+.+++.++|+||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 5899999999999999999999999999999987432 12345799999999999999999877332 22
Q ss_pred eeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
..+++++||+++ +|.+.+. ..+.+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||+
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~----~~~~l~~~~~~~~~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~-~~~~~l~dfg~ 152 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLK----AYGALTENVTRRYTRQILQGVSYLHS-NMIVHRDIKGANILRDS-AGNVKLGDFGA 152 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcC-CCCEEECcccc
Confidence 347799999985 5555554 34568999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccC----CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 161 AKQLIAG----EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 161 a~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
+...... .......++..|+|||.+.+. .++.++|+||+||++|+|++|+.||..........++.. .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~-- 226 (264)
T cd06653 153 SKRIQTICMSGTGIKSVTGTPYWMSPEVISGE-GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPT-- 226 (264)
T ss_pred ccccccccccCccccccCCcccccCHhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCC--
Confidence 9865321 112234678899999998654 478999999999999999999999987665544433321 111
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
...++..+++++.++|++||+ +|.+|||+.+++.|||.
T Consensus 227 ----------------------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 227 ----------------------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ----------------------CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 112345688999999999999 57999999999999984
No 255
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.8e-42 Score=300.31 Aligned_cols=250 Identities=29% Similarity=0.520 Sum_probs=198.2
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||++.+..+++.|++|.+..... .+.+|+.+++.++|+||+++++.+ .....++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 68999999999999999999988999999998865432 345799999999999999998876 3344588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+|+||+.+ +|.+.+. ....+++..++.++.|++.||+|||+ +|++|+||+|+||+++. ++.+||+|||++...
T Consensus 76 lv~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~~~nil~~~-~~~~kl~d~g~~~~~ 149 (264)
T cd06626 76 IFMEYCSGGTLEELLE----HGRILDEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFLDH-NGVIKLGDFGCAVKL 149 (264)
T ss_pred EEEecCCCCcHHHHHh----hcCCCChHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEccccccccc
Confidence 99999985 5555543 34568899999999999999999999 79999999999999996 888999999998865
Q ss_pred ccCCCcc-----eeeeeceeeChhhhhCCC--CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 165 IAGEANI-----SYICSRFYRAPELIFGAT--EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 165 ~~~~~~~-----~~~~t~~y~aPE~~~~~~--~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
....... ...+++.|+|||.+.+.. .++.++||||+|+++|+|++|..||...+........... +...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~--- 225 (264)
T cd06626 150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKP--- 225 (264)
T ss_pred CCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCC---
Confidence 4433221 245678899999985532 3788999999999999999999999765433222211111 1000
Q ss_pred HhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 238 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.++. ...++..+.++|.+||+.||.+|||+.+++.|||+
T Consensus 226 -----------~~~~----------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 226 -----------PIPD----------SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred -----------CCCc----------ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0000 12358899999999999999999999999999996
No 256
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.8e-42 Score=304.07 Aligned_cols=251 Identities=27% Similarity=0.460 Sum_probs=200.8
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHcC---CCceeecceeeeecCCCCcee
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRVMD---HPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.|.+.+.||+|+||.||+|.+..+++.||+|.+... .....+|+.+++.++ |||++++++++. ....
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 588899999999999999999999999999988543 123457889999986 999999999874 3345
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.|++|||+.+ +|.+.+. ...+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~ 149 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMK-----AGPIAEKYISVIIREVLVALKYIHK-VGVIHRDIKAANILVTN-TGNVKLCDFGVAA 149 (277)
T ss_pred EEEEEecCCCCcHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHHEEEcC-CCCEEEccCCcee
Confidence 8899999986 5554443 2478999999999999999999999 79999999999999996 8889999999998
Q ss_pred ccccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
....... .....++..|+|||.+.+...++.++|+||+||++|+|++|..||...+.......+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~------------ 217 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS------------ 217 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC------------
Confidence 6654432 233467889999999866555789999999999999999999999776543322111100
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
..+.. .....+.++.+++.+||+.||++|||+.+++.||||++..
T Consensus 218 -------~~~~~--------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 218 -------KPPRL--------EDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred -------CCCCC--------CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 00000 0012678999999999999999999999999999997743
No 257
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3e-42 Score=306.39 Aligned_cols=253 Identities=27% Similarity=0.442 Sum_probs=202.2
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.++|.+.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++|||++++++.+.. ....|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-----GDELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-----CCcEE
Confidence 468999999999999999999998899999999885432 234578999999999999999998843 33488
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+|+||+.+ +|.+.+.. ..+++..+..++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||++...
T Consensus 93 lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~-~gi~H~dL~p~Nili~~-~~~~kL~dfg~~~~~ 165 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQI 165 (293)
T ss_pred EEEecCCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHh-CCEeeccCCHHHEEEcC-CCCEEEccCcceecc
Confidence 99999985 55555432 457899999999999999999999 79999999999999996 788999999988755
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..... .....+++.|+|||.+.+ ..++.++|+||+||++|+|++|..||...+..+....+.. .+.+.
T Consensus 166 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~--------- 234 (293)
T cd06647 166 TPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE--------- 234 (293)
T ss_pred cccccccccccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCCC---------
Confidence 43332 223457888999999855 4588999999999999999999999987665443322111 00000
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
...+..++..+.++|++||+.||++||++.+++.||||+..+
T Consensus 235 ----------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 235 ----------------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred ----------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 001234688999999999999999999999999999998754
No 258
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.8e-42 Score=309.65 Aligned_cols=272 Identities=20% Similarity=0.263 Sum_probs=193.7
Q ss_pred CCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccccc-hH
Q 018619 23 SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SM 95 (353)
Q Consensus 23 ~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l 95 (353)
++|.||.+++..+++.||+|++.... ....+|+.+++.++||||+++++++. .....+++|||+++ ++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-----~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-----VDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-----cCCeEEEEEeccCCCCH
Confidence 45667777778899999999986441 24568999999999999999999884 33448899999994 56
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCC------
Q 018619 96 YRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA------ 169 (353)
Q Consensus 96 ~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~------ 169 (353)
.+.+... ....+++..++.++.|++.||+|||+ ++|+|+||||+||+++. ++.+||+|||.+........
T Consensus 87 ~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~-~~ivH~dlk~~Nili~~-~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 87 EDLLKTH--FPEGLPELAIAFILKDVLNALDYIHS-KGFIHRSVKASHILLSG-DGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCcceEEEec-CCceEEecCccceeeccccccccccc
Confidence 5555532 23468999999999999999999999 79999999999999995 78899999998875432221
Q ss_pred --cceeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH--HHhhcCcC
Q 018619 170 --NISYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE--EIRCMNPN 244 (353)
Q Consensus 170 --~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 244 (353)
.....++..|+|||.+.+. ..++.++|+||+||++|+|++|..||...................... ........
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence 1223467789999998653 347899999999999999999999998766554433222210000000 00000000
Q ss_pred CCCC---cCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 245 YTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 245 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
.... .................++.++.+|+.+||+.||++|||++++|+||||+.++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~ 304 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR 304 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence 0000 0000011111222233456789999999999999999999999999999987643
No 259
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=6.8e-42 Score=299.42 Aligned_cols=248 Identities=22% Similarity=0.350 Sum_probs=198.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+....|.+.+.||+|++|.||+|.+..+++.||+|.+..+.. ...+|+.+++.++||||+++++++. ....+
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPF 77 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCc
Confidence 445679999999999999999999999999999998865432 3457999999999999999998873 33347
Q ss_pred EEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+++|||++ ++|.+.+... ....+++..++.++.|++.||+|||+ +|++||||||+||++++ ++.+||+|||++..
T Consensus 78 ~lv~e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~nil~~~-~~~~kl~df~~~~~ 153 (263)
T cd05052 78 YIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGE-NHLVKVADFGLSRL 153 (263)
T ss_pred EEEEEeCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcC-CCcEEeCCCccccc
Confidence 89999997 4666665431 23568999999999999999999999 79999999999999986 78899999999986
Q ss_pred cccCCCcc--eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 164 LIAGEANI--SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 164 ~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
........ ...++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+.+..+....+....
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---------- 222 (263)
T cd05052 154 MTGDTYTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY---------- 222 (263)
T ss_pred cccceeeccCCCCCccccCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC----------
Confidence 54332211 12235679999988554 58899999999999999998 999998877655443332210
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...++..++.++.++|.+||+.||++|||+.++++
T Consensus 223 ------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 223 ------------------RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 01123457899999999999999999999999864
No 260
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-44 Score=315.86 Aligned_cols=254 Identities=24% Similarity=0.412 Sum_probs=223.1
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+..++..||-|+||.|-+++.+.....+|+|++++.+ +-...|..+|...+.|.||++|..| .+..++
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-----rd~kyv 495 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-----RDSKYV 495 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh-----ccchhh
Confidence 4567778999999999999876665568999886532 2334789999999999999999999 788889
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|++||-|-| .++..+. ..+.+.+..++.++..+++|++|||+ +|||+|||||+|++++. +|-+||.|||+|+.
T Consensus 496 YmLmEaClGGElWTiLr----dRg~Fdd~tarF~~acv~EAfeYLH~-k~iIYRDLKPENllLd~-~Gy~KLVDFGFAKk 569 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILR----DRGSFDDYTARFYVACVLEAFEYLHR-KGIIYRDLKPENLLLDN-RGYLKLVDFGFAKK 569 (732)
T ss_pred hhhHHhhcCchhhhhhh----hcCCcccchhhhhHHHHHHHHHHHHh-cCceeccCChhheeecc-CCceEEeehhhHHH
Confidence 999999975 6666665 46889999999999999999999999 89999999999999996 88899999999999
Q ss_pred cccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 164 LIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
+..+....+.+|||.|.|||++.... ...++|.||||+++|||++|.+||.+.++...+..|.+.+..
T Consensus 570 i~~g~KTwTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----------- 637 (732)
T KOG0614|consen 570 IGSGRKTWTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----------- 637 (732)
T ss_pred hccCCceeeecCCcccccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh-----------
Confidence 99999999999999999999997654 899999999999999999999999999999999888874321
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCCC
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREPN 304 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~~ 304 (353)
-.||+.++..+.+||+++...+|.+|.. +.+|..|-||....|..
T Consensus 638 ----------------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweg 687 (732)
T KOG0614|consen 638 ----------------IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEG 687 (732)
T ss_pred ----------------hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhh
Confidence 1245678999999999999999999986 88999999999988764
No 261
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.8e-42 Score=300.45 Aligned_cols=249 Identities=27% Similarity=0.423 Sum_probs=197.4
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|+||.||+|++..+++.||||.+.... ....+|+.+++.++||||+++++.+... ..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED-----NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC-----Ce
Confidence 58999999999999999999999999999999775321 2345799999999999999999988432 34
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.++++||+++ +|...+.........+++..+..++.|++.||+|||+ +|++|+||||+||+++. ++.++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~nil~~~-~~~~~l~d~g~~~ 154 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-RRVMHRDIKPANVFITA-TGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCCHHHEEEcC-CCCEEECccccce
Confidence 7899999995 6766666554455678999999999999999999999 79999999999999996 7889999999988
Q ss_pred ccccCCCc-ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhh
Q 018619 163 QLIAGEAN-ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV-DQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 163 ~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (353)
........ ....+++.|+|||.+.+. .++.++|+||+|+++|+|++|..||...... ......+...+.++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----- 228 (267)
T cd08228 155 FFSSKTTAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL----- 228 (267)
T ss_pred eccchhHHHhcCCCCccccChhhhccC-CCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC-----
Confidence 65433221 234578889999998654 4789999999999999999999999654321 122222221111110
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.....+..+.+++.+||+.||++|||+.++++
T Consensus 229 ---------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 229 ---------------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred ---------------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 11236788999999999999999999999985
No 262
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.3e-42 Score=304.58 Aligned_cols=250 Identities=23% Similarity=0.315 Sum_probs=198.6
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCC-----cEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETG-----ETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
..++|++.+.||+|+||.||++.+...+ ..||+|.+.... ..+.+|+.+++.++||||+++++++.
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~---- 78 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT---- 78 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc----
Confidence 3468999999999999999999976655 679999885432 23457999999999999999998873
Q ss_pred CCceeEEEEecccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEE
Q 018619 79 KNELFLNLVMEYVP-ESMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 145 (353)
Q Consensus 79 ~~~~~~~lv~e~~~-~~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nil 145 (353)
.....|++|||++ ++|.+.+..... ....+++..+..++.|++.||+|||+ +|++|+||||+||+
T Consensus 79 -~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nil 156 (283)
T cd05048 79 -KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAARNCL 156 (283)
T ss_pred -CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccccceEE
Confidence 3344889999998 577666654211 11568899999999999999999999 79999999999999
Q ss_pred EeCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHH
Q 018619 146 VDPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 221 (353)
Q Consensus 146 l~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~ 221 (353)
++. ++.+||+|||++........ .....+++.|+|||.+.+. .++.++|||||||++|+|++ |..||.+.+..+
T Consensus 157 ~~~-~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~ 234 (283)
T cd05048 157 VGE-GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYG-KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE 234 (283)
T ss_pred EcC-CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccC-cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 996 78899999999976543321 2234557889999998654 48999999999999999998 999998877766
Q ss_pred HHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 222 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
....+.+.... ..+..++.++.+|+.+||+.||.+|||+.+++++
T Consensus 235 ~~~~i~~~~~~----------------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 235 VIEMIRSRQLL----------------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHHcCCcC----------------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 55443321000 0124578999999999999999999999999764
No 263
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=8.3e-42 Score=302.39 Aligned_cols=252 Identities=27% Similarity=0.440 Sum_probs=202.6
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
.|...+.||+|++|.||++.+..+++.+++|++.... ....+|+.+++.++|||++++++.+.. ....+++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-----~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-----GDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-----CCeEEEE
Confidence 5667789999999999999999999999999875322 234579999999999999999998743 3347899
Q ss_pred eccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 88 MEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 88 ~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
+||+.+ +|.+.+.. .++++..+..++.|++.||+|||+ +|++||||+|+||+++. ++.++|+|||.+.....
T Consensus 95 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~dl~p~Nil~~~-~~~~~l~d~g~~~~~~~ 167 (285)
T cd06648 95 MEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHA-QGVIHRDIKSDSILLTS-DGRVKLSDFGFCAQVSK 167 (285)
T ss_pred EeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCChhhEEEcC-CCcEEEcccccchhhcc
Confidence 999975 65555432 568999999999999999999999 79999999999999996 78999999998875443
Q ss_pred CCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCC
Q 018619 167 GEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 245 (353)
Q Consensus 167 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
... .....+++.|+|||.+.+. .++.++|+||+||++|+|++|..||...+.......+... ..+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~----------- 234 (285)
T cd06648 168 EVPRRKSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPK----------- 234 (285)
T ss_pred CCcccccccCCccccCHHHhcCC-CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCC-----------
Confidence 222 2234678899999998654 4889999999999999999999999877665554433321 0000
Q ss_pred CCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 246 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
......++..+.+||++||+.||++|||+.++++||||++.+.
T Consensus 235 --------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 235 --------------LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred --------------CcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 0001236889999999999999999999999999999998654
No 264
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-41 Score=296.55 Aligned_cols=249 Identities=28% Similarity=0.446 Sum_probs=204.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|++.+.||+|++|.||++.+..+++.+++|.+.... ....+|+.+++.++|+||+++++++.. ....|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-----GNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-----CCEEE
Confidence 5899999999999999999999999999999886432 233478899999999999999988843 34588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+.........+++..++.++.|++.||+|||+ .|++|+||+|+||+++. ++.+||+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~-~~i~h~~l~~~ni~~~~-~~~~kl~d~g~~~~~ 153 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE-QKILHRDLKSANILLVA-NDLVKIGDLGISKVL 153 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEEec-CCcEEEeeccchhhh
Confidence 99999975 6777776554556779999999999999999999999 79999999999999996 788999999999866
Q ss_pred ccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 165 IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 165 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
... ......+++.|+|||.+.+ ..++.++|+||+|+++|+|++|+.||...+..+....+....
T Consensus 154 ~~~-~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-------------- 217 (256)
T cd08530 154 KKN-MAKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-------------- 217 (256)
T ss_pred ccC-CcccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--------------
Confidence 544 3334567889999999865 458889999999999999999999998877654443332210
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
++ .++...+.++++++.+||+.||.+|||+.++++||++
T Consensus 218 -----~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 218 -----YP---------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -----CC---------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 00 0112468899999999999999999999999999984
No 265
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.8e-42 Score=300.87 Aligned_cols=245 Identities=33% Similarity=0.549 Sum_probs=198.0
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
||.|++|.||++++..+|+.|++|.+.... ....+|+.+++.++||||+++++.+ ......|+++||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 689999999999999999999999886442 2345789999999999999998877 3445588999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCC--
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-- 168 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~-- 168 (353)
.+ +|.+.+.. .+.+++..+..++.|++.||+|||+ +|++|+||+|+||+++. ++.++|+|||++.......
T Consensus 76 ~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~-~~i~H~di~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~ 149 (265)
T cd05579 76 PGGDLASLLEN----VGSLDEDVARIYIAEIVLALEYLHS-NGIIHRDLKPDNILIDS-NGHLKLTDFGLSKVGLVRRQI 149 (265)
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCCCHHHeEEcC-CCCEEEEecccchhcccCccc
Confidence 85 66666543 3478999999999999999999999 79999999999999996 7889999999987544332
Q ss_pred -------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 169 -------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 169 -------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
......++..|+|||.+.+.. .+.++|+||+|+++|+|++|..||...+..+....+... .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~--------- 217 (265)
T cd05579 150 NLNDDEKEDKRIVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG--K--------- 217 (265)
T ss_pred ccccccccccCcccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--C---------
Confidence 112345678899999986544 889999999999999999999999887766555443320 0
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH---HHHhcCcccccccC
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA---LEACAHPFFDELRE 302 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~---~~~l~hp~f~~~~~ 302 (353)
...+. ...++..+.+++.+||+.||.+|||+ .++++||||+++.+
T Consensus 218 ------~~~~~----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 218 ------IEWPE----------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred ------cCCCc----------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 00010 01258899999999999999999999 99999999997653
No 266
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.5e-42 Score=301.84 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=196.2
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFS 75 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~ 75 (353)
|.+..++|++.+.||+|++|.||++.+.. ++..||+|++.... ....+|+.+++.++||||+++++++
T Consensus 1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-- 78 (277)
T cd05062 1 WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-- 78 (277)
T ss_pred CcccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE--
Confidence 34578899999999999999999998642 35679999885432 2245789999999999999999887
Q ss_pred cCCCCceeEEEEecccc-chHHHHHHhhhhc------CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC
Q 018619 76 TTSKNELFLNLVMEYVP-ESMYRVLKHYSSA------NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP 148 (353)
Q Consensus 76 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~------~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~ 148 (353)
......++||||++ ++|.+.+...... ...+++..+..++.|++.||.|||+ +|++|+||||+||++++
T Consensus 79 ---~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 79 ---SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVAE 154 (277)
T ss_pred ---cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEEcC
Confidence 33345889999998 4676666542211 2346778889999999999999999 79999999999999996
Q ss_pred CCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 018619 149 LTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLV 224 (353)
Q Consensus 149 ~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~ 224 (353)
++.++|+|||++......... ....+++.|+|||.+.+. .++.++|+|||||++|+|++ |..||.+.+..+...
T Consensus 155 -~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~ 232 (277)
T cd05062 155 -DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLR 232 (277)
T ss_pred -CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcC-CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 788999999998754332221 122446789999998654 48999999999999999998 789998877655544
Q ss_pred HHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 225 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.+... +. ..++...+..+.+++.+||+.||++|||+.+++++
T Consensus 233 ~~~~~-~~---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 233 FVMEG-GL---------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHcC-Cc---------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 33321 00 00123468899999999999999999999999854
No 267
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.2e-42 Score=311.78 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=195.5
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFF 74 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~ 74 (353)
|.+-.++|++.+.||+|+||.||+|.+.. +++.||+|++.... ....+|+.++..+ +|+||+++++++.
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 44556799999999999999999997543 45789999885432 2334799999999 8999999998774
Q ss_pred ecCCCCceeEEEEeccccc-hHHHHHHhhhh-------------------------------------------------
Q 018619 75 STTSKNELFLNLVMEYVPE-SMYRVLKHYSS------------------------------------------------- 104 (353)
Q Consensus 75 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~------------------------------------------------- 104 (353)
.. ...++++|||+++ +|.+.+.....
T Consensus 82 ~~----~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (337)
T cd05054 82 KP----GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVE 157 (337)
T ss_pred cC----CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcc
Confidence 32 2347899999985 66666543211
Q ss_pred --------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCC---ccee
Q 018619 105 --------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA---NISY 173 (353)
Q Consensus 105 --------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~---~~~~ 173 (353)
...++++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++........ ....
T Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDikp~Nill~~-~~~vkL~DfG~a~~~~~~~~~~~~~~~ 235 (337)
T cd05054 158 EDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVRKGDA 235 (337)
T ss_pred cchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEeC-CCcEEEeccccchhcccCcchhhccCC
Confidence 12368999999999999999999999 79999999999999996 78899999999986543322 1223
Q ss_pred eeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCC
Q 018619 174 ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 252 (353)
Q Consensus 174 ~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (353)
.++..|+|||++.+. .++.++||||+||++|+|++ |..||.+....+.....+.....
T Consensus 236 ~~~~~y~aPE~~~~~-~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------------------- 294 (337)
T cd05054 236 RLPLKWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR-------------------- 294 (337)
T ss_pred CCCccccCcHHhcCC-CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC--------------------
Confidence 446779999998664 58999999999999999997 99999775543333322221000
Q ss_pred CCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 253 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
...+...++++.+++.+||+.+|++||++.++++|
T Consensus 295 -------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 295 -------MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred -------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00123468899999999999999999999999864
No 268
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.3e-42 Score=306.81 Aligned_cols=251 Identities=24% Similarity=0.331 Sum_probs=194.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcE--EEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeeeecCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 79 (353)
++-++|.+.+.||+|+||.||+|.+..++.. +++|.+.... ..+.+|+.++..+ +||||+++++++ .
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~ 78 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----E 78 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----C
Confidence 4567899999999999999999998877764 5777664321 2345799999999 899999999987 3
Q ss_pred CceeEEEEecccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEE
Q 018619 80 NELFLNLVMEYVP-ESMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 146 (353)
Q Consensus 80 ~~~~~~lv~e~~~-~~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill 146 (353)
....+|+||||++ ++|.+.+..... ....+++..++.++.|++.||+|||+ +|++||||||+|||+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~Nili 157 (303)
T cd05088 79 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILV 157 (303)
T ss_pred CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEe
Confidence 3445889999998 577766654221 12468999999999999999999999 799999999999999
Q ss_pred eCCCCcEEEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 018619 147 DPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 225 (353)
Q Consensus 147 ~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~ 225 (353)
+. ++.+||+|||++..............+..|+|||.+.+ ..++.++||||+||++|+|++ |..||...+..+....
T Consensus 158 ~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 235 (303)
T cd05088 158 GE-NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 235 (303)
T ss_pred cC-CCcEEeCccccCcccchhhhcccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH
Confidence 96 78899999999864322111112233567999998855 448899999999999999998 9999987765544332
Q ss_pred HHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 226 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+... . ....+..+++++.+||.+||+.||++|||+++++++
T Consensus 236 ~~~~------------------~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 236 LPQG------------------Y----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HhcC------------------C----------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2110 0 000122468899999999999999999999999876
No 269
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-43 Score=318.59 Aligned_cols=254 Identities=28% Similarity=0.436 Sum_probs=205.7
Q ss_pred cee-eEeeeeecCCCeEEEEEEECCCCcEEEEEEe-----ecc---ccchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 11 ISY-MAERVVGTGSFGIVFQAKCLETGETVAIKKV-----LQD---RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 11 ~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~-----~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
++| +...+||+|+|-+||+|.|..+|..||--.+ .+. ...+..|+.+|+.|+||||++++..|.+...
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n--- 115 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN--- 115 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC---
Confidence 344 6677999999999999999999999884322 222 2456689999999999999999999866544
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC-CCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTV-PRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~-~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
..+.+|+|++.++ .|..|++..+++....++.|++||+.||.|||++ .-|+|||||-+||+|+...|.|||+|+|+
T Consensus 116 ~~in~iTEL~TSG---tLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGL 192 (632)
T KOG0584|consen 116 KTINFITELFTSG---TLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGL 192 (632)
T ss_pred ceeeeeeecccCC---cHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhH
Confidence 4577999999843 3344445678889999999999999999999993 35999999999999998889999999999
Q ss_pred ccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 161 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 161 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
|......... ..+|||.|||||+.. ..|+..+||||||+.+.||+|+..||.......++++.+.--..| ..
T Consensus 193 Atl~r~s~ak-svIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP--~s--- 264 (632)
T KOG0584|consen 193 ATLLRKSHAK-SVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP--AA--- 264 (632)
T ss_pred HHHhhccccc-eeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH--HH---
Confidence 9876544433 479999999999985 469999999999999999999999998877666655544321111 11
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
|.+--.+++++||.+||.. .++|+|+.|+|.||||..-
T Consensus 265 ---------------------l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 265 ---------------------LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ---------------------hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 1122378999999999999 9999999999999999874
No 270
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.1e-42 Score=303.32 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=196.5
Q ss_pred eecceeeEeeeeecCCCeEEEEEEEC-----CCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
+...+|.+.+.||+|+||.||++.+. .++..+|+|.+.... ....+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 77 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV---- 77 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe----
Confidence 46789999999999999999999863 345679999886432 23567999999999999999999873
Q ss_pred CCceeEEEEecccc-chHHHHHHhhh---------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC
Q 018619 79 KNELFLNLVMEYVP-ESMYRVLKHYS---------SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP 148 (353)
Q Consensus 79 ~~~~~~~lv~e~~~-~~l~~~l~~~~---------~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~ 148 (353)
....+++||||++ ++|.+.+.... .....+++..+..++.|++.||+|||+ +|++||||||+||+++.
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp~Nili~~ 155 (288)
T cd05093 78 -EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNCLVGE 155 (288)
T ss_pred -cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEcc
Confidence 3345889999998 56666665321 122358999999999999999999999 89999999999999996
Q ss_pred CCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 018619 149 LTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLV 224 (353)
Q Consensus 149 ~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~ 224 (353)
++.+||+|||++........ .....++..|+|||.+.+ ..++.++|+|||||++|+|++ |..||...+..+...
T Consensus 156 -~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~ 233 (288)
T cd05093 156 -NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 233 (288)
T ss_pred -CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 78899999999986543221 112334678999999865 458999999999999999998 999998877665554
Q ss_pred HHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 225 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.+...... ..+...+.++.+|+.+||+.||.+|||+.+++
T Consensus 234 ~i~~~~~~----------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~ 273 (288)
T cd05093 234 CITQGRVL----------------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIH 273 (288)
T ss_pred HHHcCCcC----------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 44331000 01134688999999999999999999999984
No 271
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-43 Score=317.62 Aligned_cols=267 Identities=26% Similarity=0.427 Sum_probs=210.8
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
..-|..++.||-|+||.|.+++...|...||+|.+.+.. .-.+.|.+||..-+++-||+++-.| ++..
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF-----QDkd 702 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKD 702 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe-----ccCC
Confidence 345788899999999999999999999999999886542 2234688999999999999998887 5555
Q ss_pred eEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+|+||+|++| ++..+|. ..+-|.|..++.++.+|..|+++.|. -|+|||||||+|||||. +|.|||+|||+|
T Consensus 703 nLYFVMdYIPGGDmMSLLI----rmgIFeE~LARFYIAEltcAiesVHk-mGFIHRDiKPDNILIDr-dGHIKLTDFGLC 776 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMMSLLI----RMGIFEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDR-DGHIKLTDFGLC 776 (1034)
T ss_pred ceEEEEeccCCccHHHHHH----HhccCHHHHHHHHHHHHHHHHHHHHh-ccceecccCccceEEcc-CCceeeeecccc
Confidence 69999999995 5554444 45889999999999999999999999 49999999999999996 888999999998
Q ss_pred ccccc---------C-----------------C-----------------CcceeeeeceeeChhhhhCCCCCCccccch
Q 018619 162 KQLIA---------G-----------------E-----------------ANISYICSRFYRAPELIFGATEYTTSIDIW 198 (353)
Q Consensus 162 ~~~~~---------~-----------------~-----------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 198 (353)
.-+.. + . .....+||+.|+|||++.. ..|+..+|+|
T Consensus 777 TGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdww 855 (1034)
T KOG0608|consen 777 TGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWW 855 (1034)
T ss_pred ccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhh
Confidence 63210 0 0 0013478999999999965 4599999999
Q ss_pred hHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhc
Q 018619 199 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLL 278 (353)
Q Consensus 199 SlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 278 (353)
|.|||||+|+.|++||...+..+...+++++.. +..+ ....++|.++.++|.++.
T Consensus 856 s~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~-------------~l~~------------~~~~~ls~e~~~li~kLc 910 (1034)
T KOG0608|consen 856 SVGVILYEMLVGQPPFLADTPGETQYKVINWRN-------------FLHI------------PYQGNLSKEALDLIQKLC 910 (1034)
T ss_pred HhhHHHHHHhhCCCCccCCCCCcceeeeeehhh-------------cccc------------ccccccCHHHHHHHHHHh
Confidence 999999999999999988887666555544211 1111 112468999999999876
Q ss_pred CcCCCCCCC---HHHHhcCcccccccCCCCCCCCCCCCC
Q 018619 279 QYSPSLRCT---ALEACAHPFFDELREPNARLPNGRPLP 314 (353)
Q Consensus 279 ~~dp~~R~t---~~~~l~hp~f~~~~~~~~~~~~~~~~~ 314 (353)
. +++.|+. ++|+..||||+.+.+.+.+......+|
T Consensus 911 ~-sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP 948 (1034)
T KOG0608|consen 911 C-SADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIP 948 (1034)
T ss_pred c-ChhhhhcccchhhhhcCccccccchHhhhhccCCcCc
Confidence 5 7899984 678999999999887654443333343
No 272
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.6e-42 Score=303.79 Aligned_cols=256 Identities=26% Similarity=0.462 Sum_probs=201.0
Q ss_pred eeeEeeeeecCCCeEEEEEEEC---CCCcEEEEEEeeccc--------cchHHHHHHHHHc-CCCceeecceeeeecCCC
Q 018619 12 SYMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR--------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~--------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 79 (353)
+|++.+.||.|+||.||+|.+. .+|+.||+|.+.... ....+|+.+++.+ +|+||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 5899999999999999999875 478999999886421 2345799999999 589999998887 4
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
....+|+||||+++ +|.+.+. ....+++..+..++.|++.||.|||+ .|++||||+|+||+++. ++.+||+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nil~~~-~~~~kl~df 149 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLS----QRERFKEQEVQIYSGEIVLALEHLHK-LGIIYRDIKLENILLDS-NGHVVLTDF 149 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEECC-CCCEEEeeC
Confidence 44568899999995 5555554 34678999999999999999999999 79999999999999996 789999999
Q ss_pred ccccccccCCC--cceeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 159 GSAKQLIAGEA--NISYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 159 g~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
|++........ .....++..|+|||.+.+. ..++.++||||+|+++|+|++|..||...+.......+.+.....
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-- 227 (290)
T cd05613 150 GLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-- 227 (290)
T ss_pred ccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--
Confidence 99976544322 2235678899999998543 346789999999999999999999997543322222222211000
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC-----CHHHHhcCcccccccCC
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 303 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-----t~~~~l~hp~f~~~~~~ 303 (353)
...++..+++.+.+++++||+.||.+|+ ++++++.||||+..++.
T Consensus 228 -----------------------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 277 (290)
T cd05613 228 -----------------------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWD 277 (290)
T ss_pred -----------------------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHH
Confidence 0012235788999999999999999997 88999999999987653
No 273
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=9.8e-42 Score=300.72 Aligned_cols=249 Identities=27% Similarity=0.420 Sum_probs=200.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+-|.+.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++||||+++++.+. .....|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 78 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW 78 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEE
Confidence 45788899999999999999999999999999875322 23457999999999999999999883 344588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ ++.+.+. ...+++..+..++.|++.|+.+||+ +|++|+||+|+||+++. ++.++|+|||++...
T Consensus 79 lv~e~~~~~~l~~~i~-----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~Ni~i~~-~~~~~l~dfg~~~~~ 151 (277)
T cd06641 79 IIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSE-HGEVKLADFGVAGQL 151 (277)
T ss_pred EEEEeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHcc-CCeecCCCCHHhEEECC-CCCEEEeecccceec
Confidence 99999986 5554443 3568999999999999999999999 89999999999999996 788999999998765
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..... .....++..|+|||.+.+ ...+.++|+||+||++|+|++|..||...+.......+... ..
T Consensus 152 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~----------- 218 (277)
T cd06641 152 TDTQIKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN-NP----------- 218 (277)
T ss_pred ccchhhhccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-CC-----------
Confidence 43322 223457888999999854 34788999999999999999999999876654433322110 00
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
..+...++.++.++|.+||+.||.+||++.++++||||.+.
T Consensus 219 ----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 219 ----------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred ----------------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 00223478899999999999999999999999999999874
No 274
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.5e-42 Score=303.22 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=198.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
+..++|.+.+.||+|+||.||+|.+.. +++.||+|.+.... ....+|+++++.++||||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 80 (280)
T cd05049 2 VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG- 80 (280)
T ss_pred CChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC-
Confidence 346789999999999999999998743 46789999886532 3456799999999999999999988443
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhh----------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEE
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYS----------SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 146 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~----------~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill 146 (353)
...++||||+. ++|.+.+.... .....+++..+..++.|++.|+++||+ +|++||||||+||++
T Consensus 81 ----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~nili 155 (280)
T cd05049 81 ----DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATRNCLV 155 (280)
T ss_pred ----CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeeccccccceEEE
Confidence 44889999998 46666665421 123558899999999999999999999 799999999999999
Q ss_pred eCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHH
Q 018619 147 DPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQ 222 (353)
Q Consensus 147 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~ 222 (353)
+. ++.+||+|||++........ .....+++.|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+.
T Consensus 156 ~~-~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~ 233 (280)
T cd05049 156 GY-DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV 233 (280)
T ss_pred cC-CCeEEECCcccceecccCcceecCCCCcccceecChhhhccC-CcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 96 78999999999875433221 1233457789999998654 48999999999999999998 9999988776655
Q ss_pred HHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 223 LVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+... .. ...+..++..+.+++++||+.||++|||+.|+++
T Consensus 234 ~~~~~~~--~~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 234 IECITQG--RL--------------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHcC--Cc--------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 5443321 00 0012347889999999999999999999999874
No 275
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.5e-41 Score=305.20 Aligned_cols=249 Identities=30% Similarity=0.437 Sum_probs=203.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
..|...+.||+|+||.||++++..++..||+|.+.... ....+|+.+++.++|||++++++++.. ...
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-----EHT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----CCe
Confidence 45888999999999999999999999999999886432 134578999999999999999998843 334
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
.++||||+.|++.+.+.. ...++++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||++..
T Consensus 100 ~~lv~e~~~g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~-~~i~H~dL~p~Nil~~~-~~~~kl~dfg~~~~ 174 (317)
T cd06635 100 AWLVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTE-PGQVKLADFGSASI 174 (317)
T ss_pred EEEEEeCCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcccEEECC-CCCEEEecCCCccc
Confidence 889999999987766643 34568999999999999999999999 79999999999999986 78899999999875
Q ss_pred cccCCCcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 164 LIAGEANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
... .....+++.|+|||.+.. ...++.++|+||+||++|+|++|..||...+.......+......+.
T Consensus 175 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------- 244 (317)
T cd06635 175 ASP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL------- 244 (317)
T ss_pred cCC---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC-------
Confidence 432 223467888999999742 23478899999999999999999999988776665555443211000
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
.....++.++++|.+||+.||.+||++.++++|||+..
T Consensus 245 --------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 245 --------------------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred --------------------CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 01236788999999999999999999999999999965
No 276
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=9.4e-42 Score=305.36 Aligned_cols=251 Identities=28% Similarity=0.430 Sum_probs=203.4
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
...|...+.||+|++|.||++++..+++.+|+|.+.... ....+|+.+++.++|+|++++.+++.. ..
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 88 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EH 88 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CC
Confidence 456888899999999999999999999999999885321 123479999999999999999998843 34
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
..++||||+.+++...+.. ....+++..++.++.|++.||.|||+ ++++|+||+|+||+++. ++.++|+|||++.
T Consensus 89 ~~~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~ 163 (308)
T cd06634 89 TAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSE-PGLVKLGDFGSAS 163 (308)
T ss_pred eeEEEEEccCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHhEEECC-CCcEEECCcccce
Confidence 5889999999887766643 34568999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCCcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 163 QLIAGEANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
..... ....+++.|+|||.+.+ ...++.++||||+||++|+|++|..||...+..+....+..... +.
T Consensus 164 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~------ 233 (308)
T cd06634 164 IMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PA------ 233 (308)
T ss_pred eecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-CC------
Confidence 54332 23467889999999753 23478899999999999999999999977665554443332100 00
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
......+..+.+||++||+.+|.+||+++++++|||+...
T Consensus 234 --------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 234 --------------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred --------------------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 0012468899999999999999999999999999999874
No 277
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=7.4e-42 Score=301.67 Aligned_cols=246 Identities=33% Similarity=0.584 Sum_probs=202.6
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcC-CCceeecceeeeecCCCCce
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMD-HPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 82 (353)
++|.+.+.||+|++|.||++.+..+++.||+|++.+.. ....+|..+++.++ ||||+++++++ .+..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 47999999999999999999999999999999886421 23457889999998 99999999987 4444
Q ss_pred eEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+++||++. ++|.+.+.. .+.+++..++.++.|++.||.+||+ +|++|+||+|+||+++. ++.++|+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~-~~~~H~dl~~~ni~i~~-~~~~~l~df~~~ 149 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHS-KGIIHRDLKPENILLDK-DMHIKITDFGTA 149 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECC-CCCEEecCCccc
Confidence 5889999995 677666653 4579999999999999999999999 79999999999999996 788999999998
Q ss_pred cccccCCC---------------------cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChH
Q 018619 162 KQLIAGEA---------------------NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 220 (353)
Q Consensus 162 ~~~~~~~~---------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~ 220 (353)
........ .....++..|+|||.+.+. .++.++|+||+|++++++++|..||...+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 228 (280)
T cd05581 150 KVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK-PAGKSSDLWALGCIIYQMLTGKPPFRGSNEY 228 (280)
T ss_pred cccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC-CCChhhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 76543221 1223567889999998554 4888999999999999999999999887755
Q ss_pred HHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH----HHHhcCcc
Q 018619 221 DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPF 296 (353)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~----~~~l~hp~ 296 (353)
.....+... . ..++..+++.+.+||.+||+.||.+|||+ .++++|||
T Consensus 229 ~~~~~~~~~-----------------~------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 229 LTFQKILKL-----------------E------------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred HHHHHHHhc-----------------C------------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 544443321 0 01223568899999999999999999999 99999999
Q ss_pred c
Q 018619 297 F 297 (353)
Q Consensus 297 f 297 (353)
|
T Consensus 280 ~ 280 (280)
T cd05581 280 F 280 (280)
T ss_pred C
Confidence 8
No 278
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.9e-42 Score=333.42 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=193.6
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|++.+.||+|+||.||+|.+..+|+.||+|++..+. ....+|+.+++.++||||+++++++. ....
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-----d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-----DGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-----eCCE
Confidence 68999999999999999999999999999999986431 23457999999999999999998873 3345
Q ss_pred EEEEeccccc-hHHHHHHhhhh-------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEE
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSS-------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKI 155 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~-------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl 155 (353)
.|++|||++| +|.+.+..... ....++...+..++.|++.||+|||+ +||+||||||+||+++. ++.+||
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~-dg~vKL 154 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS-KGVLHRDLKPDNILLGL-FGEVVI 154 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH-CCccccCCchheEEEcC-CCCEEE
Confidence 8899999985 66666653211 12345677788999999999999999 79999999999999996 788999
Q ss_pred eeeccccccccCC-------------------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCC
Q 018619 156 CDFGSAKQLIAGE-------------------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG 216 (353)
Q Consensus 156 ~Dfg~a~~~~~~~-------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~ 216 (353)
+|||++....... ......||+.|+|||.+.+. .++.++||||+||++|+|++|..||..
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~-~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV-PASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC-CCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9999998652110 01124689999999998664 489999999999999999999999977
Q ss_pred CChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 217 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.+....... .....+.. ..+ ...+++.+.+++.+||+.||++|++..+.+.+
T Consensus 234 ~~~~ki~~~--~~i~~P~~-------------------~~p-----~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 234 KKGRKISYR--DVILSPIE-------------------VAP-----YREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred cchhhhhhh--hhccChhh-------------------ccc-----cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 554332211 11111000 000 12478899999999999999999987766644
No 279
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.7e-41 Score=292.23 Aligned_cols=248 Identities=30% Similarity=0.497 Sum_probs=202.2
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
.|++.+.||+|++|.||++.+..+++.+++|++.... ....+|+.+++.++|+|++++++.+.. ....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK-----KDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CCeEEEE
Confidence 4889999999999999999998899999999986554 345689999999999999999998833 3458899
Q ss_pred ecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 88 MEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 88 ~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
+||++ ++|.+.+.. ....+++..++.++.|++.||++||+ +|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus 76 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~-~~i~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~~ 150 (253)
T cd05122 76 MEFCSGGSLKDLLKS---TNQTLTESQIAYVCKELLKGLEYLHS-NGIIHRDIKAANILLTS-DGEVKLIDFGLSAQLSD 150 (253)
T ss_pred EecCCCCcHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhc-CCEecCCCCHHHEEEcc-CCeEEEeeccccccccc
Confidence 99999 566555543 22578999999999999999999999 79999999999999996 78899999999987655
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
........++..|+|||.+.+. .++.++|+||+|+++|+|++|..||...+........... ..+.
T Consensus 151 ~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~------------ 216 (253)
T cd05122 151 TKARNTMVGTPYWMAPEVINGK-PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN-GPPG------------ 216 (253)
T ss_pred cccccceecCCcccCHHHHcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc-CCCC------------
Confidence 4433456678899999998654 4789999999999999999999999877654444332220 0000
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcc
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 296 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 296 (353)
.+ ....++..+.++|.+||+.||++|||+.+++.|||
T Consensus 217 ---~~----------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 ---LR----------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ---cC----------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00 00124789999999999999999999999999998
No 280
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=8.3e-42 Score=298.33 Aligned_cols=249 Identities=25% Similarity=0.459 Sum_probs=198.8
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc---------ccchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD---------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
+|.+.+.||+|+||.||++++..++..+++|.+... .....+|+.+++.++||||+++++.+.. ..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-----RD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-----CC
Confidence 689999999999999999999888777777665321 1123468899999999999999988743 33
Q ss_pred eEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..++||||+.+ ++...+.........+++..++.++.|++.||.|||+ +|++|+||+|+||+++. +.++|+|||++
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~~l~~~nili~~--~~~~l~d~g~~ 152 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ-RRILHRDLKAKNIFLKN--NLLKIGDFGVS 152 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCChhheEeec--CCEeecccCce
Confidence 48899999985 7766666555566789999999999999999999999 79999999999999974 56999999998
Q ss_pred cccccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 162 KQLIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 162 ~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
........ .....+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||...+.......+... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~------- 222 (260)
T cd08222 153 RLLMGSCDLATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--PT------- 222 (260)
T ss_pred eecCCCcccccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CC-------
Confidence 76544322 223457888999999854 44788999999999999999999999776654444333220 00
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
..++..++.++.++|.+||+.||++||++.++++||||
T Consensus 223 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 223 -------------------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -------------------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 00123578899999999999999999999999999997
No 281
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.8e-41 Score=296.41 Aligned_cols=248 Identities=25% Similarity=0.323 Sum_probs=197.4
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
|.+..++|++.+.||+|++|.||+|... ++..||+|.+.... ....+|+.+++.++|+||+++++++ ....
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 74 (261)
T cd05072 1 WEIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEE 74 (261)
T ss_pred CcCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCC
Confidence 3466789999999999999999999864 56779999876432 3445799999999999999998887 3334
Q ss_pred eEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+++|||+. ++|.+.+.. .....+++..+..++.|++.||+|||+ ++++|+||||+||+++. ++.++|+|||++
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nili~~-~~~~~l~dfg~~ 150 (261)
T cd05072 75 PIYIITEYMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANVLVSE-SLMCKIADFGLA 150 (261)
T ss_pred CcEEEEecCCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEecC-CCcEEECCCccc
Confidence 4889999997 577666643 234568889999999999999999999 79999999999999996 788999999999
Q ss_pred cccccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 162 KQLIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 162 ~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
......... ....++..|+|||.+.+. .++.++|+||+||++|+|++ |..||...+..+....+.+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~------ 223 (261)
T cd05072 151 RVIEDNEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM------ 223 (261)
T ss_pred eecCCCceeccCCCccceecCCHHHhccC-CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC------
Confidence 865432211 123346679999998654 48889999999999999998 99999887766655444321100
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.....++.++.+++.+||+.||++|||++++.
T Consensus 224 ----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 255 (261)
T cd05072 224 ----------------------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQ 255 (261)
T ss_pred ----------------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 01134788999999999999999999999885
No 282
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.3e-41 Score=298.19 Aligned_cols=251 Identities=25% Similarity=0.321 Sum_probs=198.1
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCC-----CcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeec
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFST 76 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 76 (353)
.+..++|++.+.||+|+||.||++.+... +..||+|.+.... ....+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-- 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-- 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc--
Confidence 45678999999999999999999987644 3789999885442 23457899999999999999999883
Q ss_pred CCCCceeEEEEecccc-chHHHHHHhhhh------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC
Q 018619 77 TSKNELFLNLVMEYVP-ESMYRVLKHYSS------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL 149 (353)
Q Consensus 77 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~ 149 (353)
.....++||||++ ++|.+.+..... ....+++..+..++.|++.||.|||+ ++++||||||+||+++.
T Consensus 80 ---~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~nill~~- 154 (277)
T cd05032 80 ---TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA-KKFVHRDLAARNCMVAE- 154 (277)
T ss_pred ---CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccChheEEEcC-
Confidence 3345889999997 577777654322 12347888999999999999999999 79999999999999996
Q ss_pred CCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 018619 150 THQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 225 (353)
Q Consensus 150 ~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~ 225 (353)
++.+||+|||+++....... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+.+..+....
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 233 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG-VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKF 233 (277)
T ss_pred CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcC-CCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHH
Confidence 78899999999875543321 1223457789999998554 48999999999999999998 9999988776555443
Q ss_pred HHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 226 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
+... .. ..++...+.++.+++.+||+.||++|||+.++++
T Consensus 234 ~~~~-~~---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 234 VIDG-GH---------------------------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HhcC-CC---------------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 3210 00 0012346889999999999999999999999874
No 283
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.7e-41 Score=300.60 Aligned_cols=256 Identities=29% Similarity=0.460 Sum_probs=207.9
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
..+.|++.+.||+|++|.||++.+..+++.|++|.+.... ....+|+.+++.++|+|++++++.+... ...|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVG-----DELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEEC-----CEEE
Confidence 3567999999999999999999999899999999987543 3456799999999999999999988443 4588
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+++||++ ++|.+.+... ...+++..+..++.|++.||+|||+ .|++|+||+|+||+++. ++.++|+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~lH~-~gi~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 166 (286)
T cd06614 92 VVMEYMDGGSLTDIITQN---FVRMNEPQIAYVCREVLQGLEYLHS-QNVIHRDIKSDNILLSK-DGSVKLADFGFAAQL 166 (286)
T ss_pred EEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCChhhEEEcC-CCCEEECccchhhhh
Confidence 9999999 5777766542 1379999999999999999999999 79999999999999996 788999999998755
Q ss_pred ccCCCc-ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEAN-ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
...... ....++..|+|||.+.+. .++.++|+||+||++|+|++|..||...+.......+... +.+..
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~-------- 236 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKRK-DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPPL-------- 236 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcCC-CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCCC--------
Confidence 433221 233567889999998654 5899999999999999999999999877665544433221 00000
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
.....++.++.++|.+||+.||.+|||+.+++.||||++..
T Consensus 237 -----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 237 -----------------KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred -----------------cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 00123688999999999999999999999999999999843
No 284
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.9e-41 Score=295.48 Aligned_cols=246 Identities=20% Similarity=0.290 Sum_probs=194.3
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
...+|.+.+.||+|++|.||++.+.. +..+|+|.+.... ....+|+.+++.++||||+++++++. ....++
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCT-----KQRPIY 75 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEc-----cCCCcE
Confidence 45789999999999999999998653 4569999886442 23467999999999999999999873 233478
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++|||+.+ +|.+.+.. ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||.+...
T Consensus 76 lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~nili~~-~~~~kl~d~g~~~~~ 150 (256)
T cd05113 76 IVTEYMSNGCLLNYLRE---HGKRFQPSQLLEMCKDVCEGMAYLES-KQFIHRDLAARNCLVDD-QGCVKVSDFGLSRYV 150 (256)
T ss_pred EEEEcCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcC-CCCEEECCCccceec
Confidence 99999985 56655543 23468999999999999999999999 79999999999999996 788999999998765
Q ss_pred ccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 165 IAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 165 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+....+.+....
T Consensus 151 ~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 220 (256)
T cd05113 151 LDDEYTSSVGSKFPVRWSPPEVLLYS-KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--------- 220 (256)
T ss_pred CCCceeecCCCccChhhCCHHHHhcC-cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC---------
Confidence 433221 122345679999998654 48899999999999999998 99999877765554444331110
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
..+...+..+.+++.+||+.||.+|||+.+++.+
T Consensus 221 -------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 221 -------------------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 0112357899999999999999999999999864
No 285
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.2e-41 Score=322.66 Aligned_cols=281 Identities=20% Similarity=0.262 Sum_probs=185.2
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCC----CcEEEEEEeeccccchHHHHHHHHH---cCCCceeecceeeeecCC-C
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLET----GETVAIKKVLQDRRYKNRELQLMRV---MDHPNVISLKHCFFSTTS-K 79 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~~~~~~~~E~~~l~~---l~h~~iv~~~~~~~~~~~-~ 79 (353)
+..++|.+.+.||+|+||.||+|.+..+ +..||+|++..... .|..+... ..+.++..+...+..... .
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNERVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHHHHHhhchhhHHHHHHhhhcccccc
Confidence 3567999999999999999999999988 89999998754322 22222222 223334433333322221 3
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhh----------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCC
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSS----------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQ 142 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~----------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~ 142 (353)
....+++|+||+++ +|.+.+..... .........++.++.||+.||+|||+ ++|+||||||+
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiHRDLKP~ 284 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVHRDVKPQ 284 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEeCcCCHH
Confidence 44458899999985 66666643110 01112345577899999999999999 79999999999
Q ss_pred cEEEeCCCCcEEEeeeccccccccCC--CcceeeeeceeeChhhhhCCC---------------------CCCccccchh
Q 018619 143 NLLVDPLTHQVKICDFGSAKQLIAGE--ANISYICSRFYRAPELIFGAT---------------------EYTTSIDIWS 199 (353)
Q Consensus 143 Nill~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~---------------------~~~~~~DiwS 199 (353)
|||++.+++.+||+|||+|+...... ......+|+.|+|||.+.... .+..++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 99999656789999999998654322 223567899999999763321 1334569999
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCcccc--ccCCCCChhHHHHHHHh
Q 018619 200 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHK--VFHKRMPPEAIDLASRL 277 (353)
Q Consensus 200 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~ 277 (353)
+||++|+|+++..++ .+....+..++...+... ..+....... ....... .+....+..+.|||.+|
T Consensus 365 lGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~dLi~~m 433 (566)
T PLN03225 365 AGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDL-VAWRKLVEPR--------ASPDLRRGFEVLDLDGGAGWELLKSM 433 (566)
T ss_pred HHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcH-HHHHHhhccc--------cchhhhhhhhhccccchHHHHHHHHH
Confidence 999999999876553 333334444444333221 1111111000 0000000 01112345677999999
Q ss_pred cCcCCCCCCCHHHHhcCcccccccCC
Q 018619 278 LQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 278 L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
|++||.+|||+.++|+||||+.....
T Consensus 434 L~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 434 MRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred ccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 99999999999999999999875443
No 286
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.6e-41 Score=292.97 Aligned_cols=246 Identities=33% Similarity=0.572 Sum_probs=202.8
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||++.+..+++.|++|.+..... ...+|+++++.++|||++++++++. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 58999999999999999999999999999998865432 3458999999999999999988873 334588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++|||+++ +|.+.+. ....+++..++.++.|++.||.+||+ +|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 ~v~e~~~~~~L~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 149 (254)
T cd06627 76 IILEYAENGSLRQIIK----KFGPFPESLVAVYVYQVLQGLAYLHE-QGVIHRDIKAANILTTK-DGVVKLADFGVATKL 149 (254)
T ss_pred EEEecCCCCcHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEECC-CCCEEEeccccceec
Confidence 99999986 5555544 34679999999999999999999999 79999999999999996 788999999999866
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
..... .....++..|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+........... .
T Consensus 150 ~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~------------ 215 (254)
T cd06627 150 NDVSKDDASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD-D------------ 215 (254)
T ss_pred CCCcccccccccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-C------------
Confidence 54433 23356788899999986544 889999999999999999999999876654443332210 0
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
...++..++..+.+++.+||..||++|||+.++++||||
T Consensus 216 ---------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 216 ---------------HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ---------------CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 011234578999999999999999999999999999997
No 287
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.2e-41 Score=302.27 Aligned_cols=251 Identities=27% Similarity=0.416 Sum_probs=199.7
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
|.....||+|+||.||++.+..+++.||+|++.... ....+|+.+++.++|+|++++++.+.. ....+++|
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~ 96 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDELWVVM 96 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-----CCEEEEEE
Confidence 344568999999999999999999999999874322 234579999999999999999998843 34588999
Q ss_pred ccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+++ ++.+.+. ...+++..++.++.|++.||+|||+ +|++|+||+|+||+++. ++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~-~givH~dl~p~Nilv~~-~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 97 EFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLKALSVLHA-QGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred ecCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEEcccccceecccc
Confidence 99986 4444332 3568999999999999999999999 79999999999999996 788999999998755433
Q ss_pred CC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 EA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 ~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.. .....+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||.+.+..+....+.......
T Consensus 170 ~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~------------- 235 (292)
T cd06657 170 VPRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK------------- 235 (292)
T ss_pred cccccccccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc-------------
Confidence 22 233567889999998854 457899999999999999999999998776655543332211000
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
......++.++.+++.+||+.||.+||++.+++.||||.....
T Consensus 236 -------------~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 236 -------------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred -------------cCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 0011246889999999999999999999999999999998643
No 288
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.5e-41 Score=305.17 Aligned_cols=248 Identities=26% Similarity=0.377 Sum_probs=194.4
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcE----EEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGET----VAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
++...+|++.+.||+|+||.||+|.+..+++. ||+|.+.... ....+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred ccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 46678899999999999999999998766654 8999885332 2345789999999999999999887431
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
..++++||+. |+|.+.+.. ....+++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+
T Consensus 82 -----~~~~v~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~-~~iiH~dlkp~Nill~~-~~~~kl~ 151 (316)
T cd05108 82 -----TVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEE-RRLVHRDLAARNVLVKT-PQHVKIT 151 (316)
T ss_pred -----CceeeeecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEecC-CCcEEEc
Confidence 2568999998 566666653 23568899999999999999999999 79999999999999996 7889999
Q ss_pred eeccccccccCCCcc---eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 018619 157 DFGSAKQLIAGEANI---SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 157 Dfg~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|||+++......... ...++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+....+.. .+......
T Consensus 152 DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~ 229 (316)
T cd05108 152 DFGLAKLLGADEKEYHAEGGKVPIKWMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGER 229 (316)
T ss_pred cccccccccCCCcceeccCCccceeecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCCC
Confidence 999998665433322 12335679999998654 58999999999999999997 99999876654432 22221000
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+ + .+...+.++.+++.+||+.||++|||+.+++.+
T Consensus 230 ~-----------------~----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 230 L-----------------P----------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred C-----------------C----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0 0 112367889999999999999999999999876
No 289
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.6e-41 Score=294.54 Aligned_cols=245 Identities=21% Similarity=0.295 Sum_probs=194.4
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
..++|++.+.||+|+||.||++..+ .+..+|+|.+.... ....+|+.+++.++||||+++++++. ....++
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLY 75 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEE
Confidence 3467999999999999999999864 45689999876432 34567999999999999999998873 334488
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||++ ++|.+.+.. ....+++..+..++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||.+...
T Consensus 76 iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~-~~~~kl~d~g~~~~~ 150 (256)
T cd05114 76 IVTEFMENGCLLNYLRQ---RQGKLSKDMLLSMCQDVCEGMEYLER-NSFIHRDLAARNCLVSS-TGVVKVSDFGMTRYV 150 (256)
T ss_pred EEEEcCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcceEEEcC-CCeEEECCCCCcccc
Confidence 9999998 566665543 23468999999999999999999999 79999999999999996 788999999998765
Q ss_pred ccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 165 IAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 165 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... ....++..|+|||.+.+. .++.++|+||+|+++|+|++ |+.||...+..+....+.+....
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~--------- 220 (256)
T cd05114 151 LDDEYTSSSGAKFPVKWSPPEVFNFS-KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL--------- 220 (256)
T ss_pred CCCceeccCCCCCchhhCChhhcccC-ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC---------
Confidence 332221 122345679999998654 58999999999999999999 89999888776665554331000
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+...+.++.+++.+||+.||++|||++++++
T Consensus 221 -------------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 221 -------------------YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -------------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011235778999999999999999999999974
No 290
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-41 Score=302.61 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=192.7
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCc--EEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeeeecCCCCce
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGE--TVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 82 (353)
++|++.+.||+|+||.||+|....++. .+++|.+.... ....+|+.++.++ +||||+++++++ ....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC-----ENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE-----ccCC
Confidence 579999999999999999999877765 46888775321 2345799999888 799999999987 3334
Q ss_pred eEEEEecccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL 149 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~ 149 (353)
.+|++|||++ ++|.+.+..... ....+++..++.++.|++.||+|||+ +|++||||||+||+++.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Nill~~- 154 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNVLVGE- 154 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceEEECC-
Confidence 5889999998 577777654221 12358899999999999999999999 89999999999999996
Q ss_pred CCcEEEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 018619 150 THQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 228 (353)
Q Consensus 150 ~~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~ 228 (353)
++.+||+|||++..............+..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+..
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~ 233 (297)
T cd05089 155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYS-VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 233 (297)
T ss_pred CCeEEECCcCCCccccceeccCCCCcCccccCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc
Confidence 788999999998643221111112224569999998554 48999999999999999997 9999988776655544322
Q ss_pred HhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 229 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
... ...+..++.++.+|+.+||+.||.+|||++++++.
T Consensus 234 ~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 234 GYR----------------------------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCC----------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 100 01123478899999999999999999999999755
No 291
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4e-41 Score=293.18 Aligned_cols=250 Identities=33% Similarity=0.516 Sum_probs=201.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+|.+.+.||+|++|.||++.+..+++.|++|.+.... ....+|+.+++.++||||+++++.+.... ...++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 5889999999999999999999999999999886543 24567999999999999999988874321 24588
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+++||++ ++|.+.+.. ...+++..++.++.|++.||+|||+ +|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 78 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~~~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 151 (260)
T cd06606 78 IFLEYVSGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYLHS-NGIVHRDIKGANILVDS-DGVVKLADFGCAKRL 151 (260)
T ss_pred EEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcC-CCCEEEcccccEEec
Confidence 9999996 566555543 3489999999999999999999999 79999999999999996 788999999999876
Q ss_pred ccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 165 IAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 165 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
..... .....++..|+|||.+.+. ..+.++|+||+|+++|+|++|..||...+.... .......
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~---------- 218 (260)
T cd06606 152 GDIETGEGTGSVRGTPYWMAPEVIRGE-EYGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGS---------- 218 (260)
T ss_pred ccccccccccCCCCCccccCHhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccc----------
Confidence 65543 3445678899999998554 489999999999999999999999987662211 1111000
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
......++..++..+.++|.+||+.||++||++.++++||||
T Consensus 219 --------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 --------------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred --------------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 000111334568999999999999999999999999999997
No 292
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.9e-41 Score=295.30 Aligned_cols=246 Identities=26% Similarity=0.314 Sum_probs=194.4
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+..++|++.+.||+|+||.||+|.+..+ ..||+|.+.... ....+|+.+++.++||||+++++.+. . ..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-----~-~~ 74 (262)
T cd05071 2 EIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EP 74 (262)
T ss_pred CCChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-----C-CC
Confidence 45678999999999999999999998655 469999886533 23568999999999999999987651 1 22
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.++||||+++ +|.+.+... ....+++..+..++.|++.||+|||+ ++++|+||||+||+++. ++.+||+|||.+.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~Nill~~-~~~~~L~dfg~~~ 150 (262)
T cd05071 75 IYIVTEYMSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGE-NLVCKVADFGLAR 150 (262)
T ss_pred cEEEEEcCCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcccEEEcC-CCcEEeccCCcee
Confidence 6799999985 776666532 23467899999999999999999999 79999999999999996 7889999999997
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
........ ....++..|+|||...+. .++.++|+||+||++|+|++ |..||.+....+....+......
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~------- 222 (262)
T cd05071 151 LIEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM------- 222 (262)
T ss_pred eccccccccccCCcccceecCHhHhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC-------
Confidence 65433221 123456789999988554 48999999999999999999 88999877765554433221000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.....++..+.+++.+||+.||++|||+.+++
T Consensus 223 ---------------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~ 254 (262)
T cd05071 223 ---------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQ 254 (262)
T ss_pred ---------------------CCccccCHHHHHHHHHHccCCcccCCCHHHHH
Confidence 01134788999999999999999999999875
No 293
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3e-41 Score=296.73 Aligned_cols=251 Identities=22% Similarity=0.280 Sum_probs=194.7
Q ss_pred eeEeeeeecCCCeEEEEEEECC---CCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCC-CCce
Q 018619 13 YMAERVVGTGSFGIVFQAKCLE---TGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNEL 82 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 82 (353)
|.+.+.||+|+||.||.|.... ++..||+|.+..+. ....+|+.+++.++||||+++++.+..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5788999999999999998765 34789999886432 234578999999999999999987754433 3334
Q ss_pred eEEEEecccc-chHHHHHHhhhh--cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSS--ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~--~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
..+++|||+. ++|...+..... ....+++..++.++.|++.||.|||+ ++++||||||+||++++ ++.+||+|||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~-~~i~H~dlkp~Nil~~~-~~~~kl~dfg 158 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN-RNFIHRDLAARNCMLRE-DMTVCVADFG 158 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchheEEECC-CCeEEECCcc
Confidence 5789999998 466666543221 23468999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 160 SAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 160 ~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
+++........ ....++..|+|||.+.+ ..++.++||||+||++|+|++ |..||.+.+..+....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~---- 233 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR---- 233 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----
Confidence 99865433221 11234567999999854 458999999999999999999 8999988776555433322100
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
...+..++.++.+++.+||+.||++|||+.+++.+
T Consensus 234 ------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 234 ------------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ------------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00123578899999999999999999999998753
No 294
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=342.35 Aligned_cols=254 Identities=28% Similarity=0.477 Sum_probs=204.9
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
-+|.-...||.|.||.||.|.+..+|+..|+|.+.-+ .....+|..++..++|||+|+++++=. ++..+
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv-----HRekv 1309 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV-----HREKV 1309 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee-----cHHHH
Confidence 3566677999999999999999999999999977422 233458999999999999999988753 33348
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+|.||||.+ +|.+.+.+ ++..++...+.+..|++.|+.|||+ +|||||||||.||+++. +|.+|++|||.|..
T Consensus 1310 ~IFMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~-~gIVHRDIK~aNI~Ld~-~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHE-HGIVHRDIKPANILLDF-NGLIKYGDFGSAVK 1383 (1509)
T ss_pred HHHHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHh-cCceecCCCccceeeec-CCcEEeecccceeE
Confidence 899999995 55555543 4557788888899999999999999 79999999999999996 88999999999987
Q ss_pred cccCC-----CcceeeeeceeeChhhhhCCC--CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 164 LIAGE-----ANISYICSRFYRAPELIFGAT--EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 164 ~~~~~-----~~~~~~~t~~y~aPE~~~~~~--~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
+.... ......||+.|||||++.+.. ....+.||||+||++.||+||+.||...+..=.+--.+.....|.
T Consensus 1384 i~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq-- 1461 (1509)
T KOG4645|consen 1384 IKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ-- 1461 (1509)
T ss_pred ecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCC--
Confidence 76543 234678999999999997753 356799999999999999999999987665433322222222221
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
+|.++|++.+|||.+||+.||.+|.++.|++.|-|-+.-.+
T Consensus 1462 -------------------------~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1462 -------------------------IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred -------------------------CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 44569999999999999999999999999999998776443
No 295
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.2e-41 Score=297.46 Aligned_cols=252 Identities=20% Similarity=0.278 Sum_probs=196.8
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
+..++|.+.+.||+|++|.||+|.+.. ++..||+|.+.... ..+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 81 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER- 81 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC-
Confidence 356889999999999999999999987 77889999875432 2345789999999999999999887432
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC--CC
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSS---ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL--TH 151 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~---~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~--~~ 151 (353)
...++||||+. ++|.+.+..... ....+++..+..++.||+.||+|||+ ++++|+||||+||+++.. +.
T Consensus 82 ----~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~~~~~ 156 (277)
T cd05036 82 ----LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCKGPGR 156 (277)
T ss_pred ----CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchheEEEeccCCCc
Confidence 34789999997 577776654321 12358999999999999999999999 799999999999999852 23
Q ss_pred cEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 018619 152 QVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEII 227 (353)
Q Consensus 152 ~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~ 227 (353)
.+||+|||+++........ .....+..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+.
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~ 235 (277)
T cd05036 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDG-IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT 235 (277)
T ss_pred ceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcC-CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 6999999999865322211 112234679999998654 48999999999999999996 999998877665443322
Q ss_pred HHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 228 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.. .. ..++..++..+.+++.+||+.||++|||+.++++|
T Consensus 236 ~~-~~---------------------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 236 GG-GR---------------------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred cC-Cc---------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 21 00 01123578899999999999999999999999876
No 296
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.6e-41 Score=292.46 Aligned_cols=247 Identities=22% Similarity=0.315 Sum_probs=196.0
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
|.+...+|.+.+.||+|++|.||++.. .|..||+|.+..+.. ...+|+.+++.++|+|+++++++++.. ...
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~ 74 (256)
T cd05082 1 WALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGG 74 (256)
T ss_pred CCccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcC----CCc
Confidence 456778999999999999999999976 478899998865432 345899999999999999998876432 224
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|||+++ +|.+.+... ....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~ 150 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEA-NNFVHRDLAARNVLVSE-DNVAKVSDFGLTK 150 (256)
T ss_pred eEEEEECCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeccccchheEEEcC-CCcEEecCCccce
Confidence 7899999984 776666531 23458899999999999999999999 79999999999999996 8889999999987
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... ....++..|+|||.+.+ ..++.++||||+||++|+|++ |..||...+..+....+.+..
T Consensus 151 ~~~~~~--~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~----------- 216 (256)
T cd05082 151 EASSTQ--DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY----------- 216 (256)
T ss_pred eccccC--CCCccceeecCHHHHcc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-----------
Confidence 543322 22334567999999855 458899999999999999997 999998776555443332210
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
....+..+++.+.+++.+||+.||++|||+.++++
T Consensus 217 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 217 -----------------KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -----------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 01122357899999999999999999999999864
No 297
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=7.8e-41 Score=293.16 Aligned_cols=248 Identities=30% Similarity=0.490 Sum_probs=197.5
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|++|.||+|.+..+|+.||+|.+... .....+|+.+++.++|+|++++++.+.. ...
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-----~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-----NNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-----CCe
Confidence 6899999999999999999999999999999987531 2345589999999999999999998843 345
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|||+++ +|...+.........+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~nil~~~-~~~~~l~d~~~~~ 154 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-KRIMHRDIKPANVFITA-TGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecCCcChhhEEECC-CCcEEEeccceee
Confidence 8899999984 7777776554556678999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHh
Q 018619 163 QLIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV--DQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 163 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 239 (353)
....... .....+++.|+|||.+.+. .++.++|+||+||++|+|++|..||...... +....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 223 (267)
T cd08224 155 FFSSKTTAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC---------- 223 (267)
T ss_pred eccCCCcccceecCCccccCHHHhccC-CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC----------
Confidence 6543322 2345678899999998654 4889999999999999999999999654321 111111110
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+. .....++.++.++|.+||..+|++|||+.++++
T Consensus 224 ---------~~~~--------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 224 ---------DYPP--------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ---------CCCC--------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0000 001246789999999999999999999998863
No 298
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.5e-41 Score=309.69 Aligned_cols=253 Identities=25% Similarity=0.373 Sum_probs=194.5
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCC-----CcEEEEEEeeccc-----cchHHHHHHHHHcC-CCceeecceeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDR-----RYKNRELQLMRVMD-HPNVISLKHCFF 74 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~-----~~~~~E~~~l~~l~-h~~iv~~~~~~~ 74 (353)
+....++|++.+.||+|+||.||+|.+... +..||||++.... ....+|+.++..++ ||||+++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~- 110 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC- 110 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE-
Confidence 445578899999999999999999987433 3469999886432 23457999999996 99999999988
Q ss_pred ecCCCCceeEEEEecccc-chHHHHHHhhhh-------------------------------------------------
Q 018619 75 STTSKNELFLNLVMEYVP-ESMYRVLKHYSS------------------------------------------------- 104 (353)
Q Consensus 75 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------------------------------------------------- 104 (353)
.....+|+|||||+ |+|.+.+.....
T Consensus 111 ----~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (400)
T cd05105 111 ----TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT 186 (400)
T ss_pred ----ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence 33445899999998 567666543210
Q ss_pred -------------------------------------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCC
Q 018619 105 -------------------------------------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKP 141 (353)
Q Consensus 105 -------------------------------------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp 141 (353)
....+++..+..++.|++.||+|||+ ++|+||||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dikp 265 (400)
T cd05105 187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHRDLAA 265 (400)
T ss_pred ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCh
Confidence 12357888899999999999999999 7999999999
Q ss_pred CcEEEeCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCC
Q 018619 142 QNLLVDPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGE 217 (353)
Q Consensus 142 ~Nill~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~ 217 (353)
+|||++. ++.+||+|||++........ .....+++.|+|||.+.+. .++.++|||||||++|+|++ |..||...
T Consensus 266 ~Nill~~-~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 266 RNVLLAQ-GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDN-LYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred HhEEEeC-CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 9999996 78899999999986543322 1223456789999998654 48999999999999999997 99999876
Q ss_pred ChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 218 NAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+.....+..... ...+..++.++.+++.+||+.||++|||+.++.+
T Consensus 344 ~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 344 IVDSTFYNKIKSGYR---------------------------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred chhHHHHHHHhcCCC---------------------------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 544333332221000 0012347889999999999999999999988754
No 299
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3.7e-41 Score=328.64 Aligned_cols=142 Identities=23% Similarity=0.381 Sum_probs=122.9
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
.++|.+.+.||.|+||.||+|.+..+++.||||++.+.. ....+|+.++..++||||++++.++ ....
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECC
Confidence 468999999999999999999999999999999986532 3456789999999999999998877 3344
Q ss_pred eEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+|+||||+.+ +|...+.. .+.+++..++.++.||+.||.|||+ ++|+||||||+|||++. ++.+||+|||++
T Consensus 78 ~~~lVmEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~-~g~vkL~DFGls 151 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHR-HGIIHRDLKPDNMLISN-EGHIKLTDFGLS 151 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCccHHHEEEcC-CCCEEEEeCCCC
Confidence 58999999974 66665543 4568999999999999999999999 79999999999999996 788999999987
Q ss_pred c
Q 018619 162 K 162 (353)
Q Consensus 162 ~ 162 (353)
+
T Consensus 152 ~ 152 (669)
T cd05610 152 K 152 (669)
T ss_pred c
Confidence 5
No 300
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.8e-41 Score=297.36 Aligned_cols=248 Identities=29% Similarity=0.473 Sum_probs=195.8
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-------ccchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
++|.+.+.||+|++|.||++.+..+++.||+|.+... .....+|+.+++.++||||+++++++.. ...
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-----CCe
Confidence 5789999999999999999999999999999987532 1234579999999999999999998843 334
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|||+.+ +|.+.+.........+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~-~~~~~l~dfg~~~ 154 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITA-TGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcC-CCCEEECcchhhh
Confidence 8899999985 6776666544455678999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhh
Q 018619 163 QLIAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV-DQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 163 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (353)
....... .....++..|+|||.+.+. .++.++|+||+|+++|+|++|..||.+.... ....+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------- 224 (267)
T cd08229 155 FFSSKTTAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--------- 224 (267)
T ss_pred ccccCCcccccccCCcCccCHHHhcCC-CccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC---------
Confidence 6543322 2234678899999998654 4889999999999999999999999754432 11111111000
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.+ .......++++.++|.+||+.||++|||+.+++
T Consensus 225 ---------~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~ 259 (267)
T cd08229 225 ---------YP--------PLPSDHYSEELRQLVNMCINPDPEKRPDITYVY 259 (267)
T ss_pred ---------CC--------CCCcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence 00 001124788999999999999999999999775
No 301
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.8e-41 Score=293.63 Aligned_cols=238 Identities=22% Similarity=0.321 Sum_probs=186.2
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++.. ...+++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----CCCeEEEEeec
Confidence 46899999999999999999999999875432 335679999999999999999998833 34488999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN 170 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~ 170 (353)
.+ +|.+.+.. ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||++.........
T Consensus 76 ~~~~L~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 76 QGGDFLTFLRT---EGPRLKVKELIQMVENAAAGMEYLES-KHCIHRDLAARNCLVTE-KNVLKISDFGMSREEEDGVYA 150 (252)
T ss_pred cCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEEcC-CCcEEECccccCccccccccc
Confidence 85 55555532 34568999999999999999999999 79999999999999996 788999999998754322111
Q ss_pred c---eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 171 I---SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 171 ~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
. ....+..|+|||.+.+. .++.++|+||+||++|+|++ |..||...........+.....
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~--------------- 214 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYG-RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR--------------- 214 (252)
T ss_pred ccCCCCCCceeecCchhhcCC-CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---------------
Confidence 1 11224569999998554 48899999999999999997 8999977665443332221100
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..++...+..+.+|+.+||+.||++|||+.++++
T Consensus 215 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 215 -------------LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0112346889999999999999999999999863
No 302
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.9e-41 Score=298.62 Aligned_cols=252 Identities=25% Similarity=0.364 Sum_probs=197.6
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCC-----CcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeeee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFFS 75 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~~ 75 (353)
-+..++|.+.+.||+|+||.||++.+... ...+|+|.+.... ....+|+.+++.+ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~- 86 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT- 86 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc-
Confidence 45678999999999999999999987644 3789999886432 2245799999999 8999999999873
Q ss_pred cCCCCceeEEEEecccc-chHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCC
Q 018619 76 TTSKNELFLNLVMEYVP-ESMYRVLKHYS------------SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQ 142 (353)
Q Consensus 76 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~------------~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~ 142 (353)
....++++|||+. ++|...+.... .....+++..+..++.|++.||+|||+ ++|+||||||+
T Consensus 87 ----~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~dlkp~ 161 (293)
T cd05053 87 ----QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHRDLAAR 161 (293)
T ss_pred ----CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCcccccccee
Confidence 3344889999998 57766665421 234678999999999999999999999 79999999999
Q ss_pred cEEEeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCC
Q 018619 143 NLLVDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGEN 218 (353)
Q Consensus 143 Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~ 218 (353)
||+++. ++.+||+|||+++........ ....++..|+|||.+.+ ..++.++||||+||++|+|++ |..||.+..
T Consensus 162 Nil~~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 239 (293)
T cd05053 162 NVLVTE-DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 239 (293)
T ss_pred eEEEcC-CCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence 999996 889999999999865433211 11223567999999855 458999999999999999997 999998877
Q ss_pred hHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 219 AVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
..+....+..... ...+...+.++.+|+.+||..||.+|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 240 VEELFKLLKEGYR----------------------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHHHHcCCc----------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 6555443322100 00123468899999999999999999999999864
No 303
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.5e-41 Score=298.07 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=194.1
Q ss_pred cceeeEeeeeecCCCeEEEEEEEC----CCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCL----ETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
-..|++.+.||+|+||+||+|... .+++.||+|.+.... ..+.+|+.+++.++||||+++++++. .
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~ 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----Q 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----c
Confidence 367899999999999999999853 456789999886422 34567999999999999999998873 3
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhh-------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEE
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSS-------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 146 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~-------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill 146 (353)
....|++|||+++ +|.+.+..... ....+++..+..++.|++.||+|||+ +|++|+||||+||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~nili 157 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAARNILI 157 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-cCeehhccccceEEE
Confidence 3348899999984 66666542110 12357889999999999999999999 799999999999999
Q ss_pred eCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHH
Q 018619 147 DPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQ 222 (353)
Q Consensus 147 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~ 222 (353)
+. ++.+||+|||+++....... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+.+..+.
T Consensus 158 ~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05090 158 GE-QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG-KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV 235 (283)
T ss_pred cC-CCcEEeccccccccccCCcceecccCCCccceecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 96 78899999999986543321 1223446679999998654 48999999999999999998 9999987765544
Q ss_pred HHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 223 LVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
...+... ..+ ..+..+++.+.+++.+||+.||.+||++.+++++
T Consensus 236 ~~~~~~~-~~~---------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 236 IEMVRKR-QLL---------------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHcC-CcC---------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 4333221 000 0123478899999999999999999999998754
No 304
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.7e-41 Score=293.24 Aligned_cols=246 Identities=24% Similarity=0.317 Sum_probs=195.5
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+..++|++.+.||+|++|.||++.+. +++.||+|.+.... ....+|+.+++.++||||+++++++. .....
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEPI 76 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCCe
Confidence 45788999999999999999999864 45789999886532 34567999999999999999998773 33347
Q ss_pred EEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|++|||+. ++|.+.+... ....+++..+..++.|++.||.+||+ +|++|+||||+||+++. ++.+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~-~~~~~l~dfg~~~~ 152 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGG--AGRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGE-NNICKVADFGLARV 152 (261)
T ss_pred eeeeecccCCcHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCcceEEEcC-CCCEEECCcceEEE
Confidence 89999995 6777666542 23568999999999999999999999 79999999999999996 78899999999986
Q ss_pred cccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 164 LIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 164 ~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
....... .....+..|+|||.+.+ ..++.++|+|||||++|+|++ |+.||.+.+.......+.+....
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (261)
T cd05068 153 IKEDIYEAREGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM-------- 223 (261)
T ss_pred ccCCcccccCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC--------
Confidence 6532211 11122457999998855 458999999999999999999 99999887766555444321100
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
..+...+..+.+++.+||+.||.+||++.+++
T Consensus 224 --------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~ 255 (261)
T cd05068 224 --------------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQ 255 (261)
T ss_pred --------------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 01234688999999999999999999999986
No 305
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-41 Score=300.26 Aligned_cols=250 Identities=22% Similarity=0.279 Sum_probs=195.3
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCC-----CcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
...+|++.+.||+|+||.||++.+..+ ++.||+|++.... ..+.+|+.++..++||||+++++++.
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~---- 78 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT---- 78 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc----
Confidence 345789999999999999999987543 5789999986443 23457889999999999999999873
Q ss_pred CCceeEEEEeccccc-hHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEE
Q 018619 79 KNELFLNLVMEYVPE-SMYRVLKHYS------------SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLL 145 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~-~l~~~l~~~~------------~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nil 145 (353)
.....++++||+.+ +|...+.... .....+++..+..++.|++.||+|||+ +|++||||||+||+
T Consensus 79 -~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~Nil 156 (283)
T cd05091 79 -KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATRNVL 156 (283)
T ss_pred -CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-cCccccccchhheE
Confidence 33347899999984 5655553211 112458889999999999999999999 79999999999999
Q ss_pred EeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHH
Q 018619 146 VDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 221 (353)
Q Consensus 146 l~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~ 221 (353)
++. ++.+||+|||+++........ ....+++.|+|||.+.+. .++.++||||+||++|+|++ |..||.+....+
T Consensus 157 ~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 234 (283)
T cd05091 157 VFD-KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 234 (283)
T ss_pred ecC-CCceEecccccccccccchheeeccCccCCccccCHHHHhcC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 995 778999999998765432221 123346789999998654 48999999999999999998 889998877666
Q ss_pred HHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 222 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
....+...... .++..++..+.+|+.+||+.||.+||+++++++.
T Consensus 235 ~~~~i~~~~~~----------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 235 VIEMIRNRQVL----------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHHHHHcCCcC----------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 55544431100 1224578899999999999999999999999753
No 306
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=8.1e-41 Score=291.85 Aligned_cols=242 Identities=27% Similarity=0.402 Sum_probs=196.4
Q ss_pred eeeecCCCeEEEEEEECCC---CcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLET---GETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|.+... +..|++|.+.... ....+|+.+++.++|+|++++++++.. ...++++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4789999999999998866 8899999886543 344579999999999999999988843 44588999
Q ss_pred cccc-chHHHHHHhhhhc-----CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 89 EYVP-ESMYRVLKHYSSA-----NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 89 e~~~-~~l~~~l~~~~~~-----~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
||+. ++|.+.+...... ...+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||.+.
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~nili~~-~~~~~l~dfg~~~ 153 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS-KKFVHRDLAARNCLVGE-DLVVKISDFGLSR 153 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc-CCcccCccCcceEEECC-CCcEEEccccccc
Confidence 9995 6777776653211 4779999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCC---CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 163 QLIAGE---ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 163 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
...... ......++..|+|||.+.+. .++.++||||+||++|+|++ |..||...+..+....+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--------- 223 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--------- 223 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------
Confidence 765442 12334568889999998654 58999999999999999998 69999888765555443321
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+....+..+++++.+++.+||+.||++|||+.++++|
T Consensus 224 -------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 -------------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -------------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0011223568999999999999999999999999865
No 307
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1e-40 Score=292.50 Aligned_cols=247 Identities=24% Similarity=0.310 Sum_probs=195.0
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCC---CcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLET---GETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
..++|.+.+.||+|+||.||+|....+ ...||+|.+.... ....+|+.+++.++||||+++++.+. .
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 76 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-----K 76 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-----c
Confidence 467899999999999999999998654 4579999875432 23346999999999999999999873 3
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
....+++|||+.+ +|.+.+.. ..+.+++..+..++.|++.||+|||+ ++|+|+||||+||+++. ++.++|+|||
T Consensus 77 ~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~di~p~nili~~-~~~~~l~dfg 151 (266)
T cd05033 77 SRPVMIITEYMENGSLDKFLRE---NDGKFTVGQLVGMLRGIASGMKYLSE-MNYVHRDLAARNILVNS-NLVCKVSDFG 151 (266)
T ss_pred CCceEEEEEcCCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcC-CCCEEECccc
Confidence 3448899999985 66655543 23578999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCCc-c--eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 160 SAKQLIAGEAN-I--SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 160 ~a~~~~~~~~~-~--~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
++......... . ...++..|+|||.+.+ ..++.++||||+|+++|+|++ |..||......+....+.+....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-- 228 (266)
T cd05033 152 LSRRLEDSEATYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP-- 228 (266)
T ss_pred hhhcccccccceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC--
Confidence 99876422221 1 1223567999999855 458999999999999999997 999998776655544333210000
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.+...++.+.+++.+||+.||++||++.+++++
T Consensus 229 --------------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 229 --------------------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred --------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 113468899999999999999999999999754
No 308
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-44 Score=290.72 Aligned_cols=267 Identities=24% Similarity=0.353 Sum_probs=210.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHH-HHHHcCCCceeecceeeeecCCCCc
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQ-LMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
+..++.+-...||.|+||+|++..++.+|+..|+|++.... .++..|.+ +++.-+.||||++++..+...+
T Consensus 61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd--- 137 (361)
T KOG1006|consen 61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD--- 137 (361)
T ss_pred cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc---
Confidence 44556667789999999999999999999999999986432 23334555 3444579999999999865544
Q ss_pred eeEEEEeccccchHHHHHH-hhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 82 LFLNLVMEYVPESMYRVLK-HYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~-~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
.|+.||+|+-++..... -+......++|..+-.+....+.||.||.....|||||+||+|||++. .|.+||||||+
T Consensus 138 --cWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr-~G~vKLCDFGI 214 (361)
T KOG1006|consen 138 --CWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR-HGDVKLCDFGI 214 (361)
T ss_pred --eeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec-CCCEeeecccc
Confidence 88999999976655443 244556789999999999999999999998668999999999999996 88899999999
Q ss_pred ccccccCCCcceeeeeceeeChhhhhCCC-CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCCHHHH
Q 018619 161 AKQLIAGEANISYICSRFYRAPELIFGAT-EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTPTREEI 238 (353)
Q Consensus 161 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (353)
|....+.-..+...|...|||||.+.... .|..+||+||||++|||+.||..||.+.++ ...++... .|.|+.-..
T Consensus 215 cGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~ 292 (361)
T KOG1006|consen 215 CGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLF 292 (361)
T ss_pred hHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecC
Confidence 98877766666778999999999985543 389999999999999999999999987665 33333322 122221100
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccCC
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 303 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~~ 303 (353)
+.. --..+..+..||.-||.+|-+.||.-.+++.+||++.....
T Consensus 293 -----~~~----------------~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 293 -----DKE----------------CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred -----ccc----------------ccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhc
Confidence 000 01378899999999999999999999999999999876544
No 309
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=6.2e-41 Score=292.17 Aligned_cols=246 Identities=19% Similarity=0.283 Sum_probs=194.0
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
...+|++.+.||+|++|.||++.+. ++..+|+|.+.+.. ....+|+.+++.++||||+++++++ ......|
T Consensus 2 ~~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd05059 2 DPSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC-----TKQRPIF 75 (256)
T ss_pred ChHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEE-----cCCCceE
Confidence 3467899999999999999999875 56789999886432 2345799999999999999998887 3334588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+.. ....+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||+++..
T Consensus 76 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~ni~i~~-~~~~kl~dfg~~~~~ 150 (256)
T cd05059 76 IVTEYMANGCLLNYLRE---RKGKLGTEWLLDMCSDVCEAMEYLES-NGFIHRDLAARNCLVGE-DNVVKVSDFGLARYV 150 (256)
T ss_pred EEEecCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHhhEEECC-CCcEEECCcccceec
Confidence 99999975 66665543 23478999999999999999999999 79999999999999996 788999999998765
Q ss_pred ccCCCcc--eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 165 IAGEANI--SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 165 ~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
....... ...++..|+|||.+.+. .++.++|+||+||++|+|++ |..||...+..+....+.....
T Consensus 151 ~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---------- 219 (256)
T cd05059 151 LDDQYTSSQGTKFPVKWAPPEVFDYS-RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR---------- 219 (256)
T ss_pred ccccccccCCCCCCccccCHHHhccC-CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc----------
Confidence 4322111 12234579999998654 48999999999999999998 8999987776555443322100
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
...+...+.++.+++.+||+.+|++|||+.++++.
T Consensus 220 ------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 ------------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 01123468899999999999999999999999853
No 310
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8e-41 Score=299.26 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=195.4
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECC-------CCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeeccee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLE-------TGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHC 72 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~ 72 (353)
+.+..++|.+.+.||+|+||.||++++.. +...+|+|.+..+. ....+|+.+++.+ +||||++++++
T Consensus 13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 44567899999999999999999998653 23569999886532 2344689999999 79999999998
Q ss_pred eeecCCCCceeEEEEecccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccC
Q 018619 73 FFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL 139 (353)
Q Consensus 73 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl 139 (353)
+. .....|+||||++ ++|.+.+..... ....+++..+..++.|++.||+|||+ +|++||||
T Consensus 93 ~~-----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dl 166 (307)
T cd05098 93 CT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIHRDL 166 (307)
T ss_pred Ee-----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCcccccc
Confidence 73 3345889999998 577777754321 12358899999999999999999999 79999999
Q ss_pred CCCcEEEeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCC
Q 018619 140 KPQNLLVDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFP 215 (353)
Q Consensus 140 kp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~ 215 (353)
||+||+++. ++.+||+|||.+......... ....+++.|+|||.+.+. .++.++|+||+||++|+|++ |..||.
T Consensus 167 kp~Nill~~-~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 167 AARNVLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred cHHheEEcC-CCcEEECCCcccccccccchhhccccCCCccceeChHHhccC-CCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999996 788999999998765432211 112234679999998654 48999999999999999998 889997
Q ss_pred CCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 216 GENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+.+..+....+... . ...++..++.++.+|+.+||..+|++|||+.+++++
T Consensus 245 ~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 245 GVPVEELFKLLKEG-H---------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred cCCHHHHHHHHHcC-C---------------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 76654433322210 0 001223578899999999999999999999999753
No 311
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1e-40 Score=295.09 Aligned_cols=258 Identities=28% Similarity=0.366 Sum_probs=189.7
Q ss_pred cee-eEeeeeecCCCeEEEEEE----ECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 11 ISY-MAERVVGTGSFGIVFQAK----CLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 11 ~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
++| .+.+.||+|+||+||++. ...+++.||+|.+.... ....+|+.+++.++||||+++++++.. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CC
Confidence 455 999999999999998865 33568899999886432 234579999999999999999887643 22
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
...++++|||+++ +|.+.+.. ..+++..++.++.|++.||+|||+ +|++|+||||+||++++ ++.+||+|||
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~-~~i~H~dlkp~Nili~~-~~~~~l~dfg 152 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHS-QHYIHRDLAARNVLLDN-DRLVKIGDFG 152 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccChheEEEcC-CCcEEEeecc
Confidence 3457899999995 55555532 469999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCCc----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCC
Q 018619 160 SAKQLIAGEAN----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTPT 234 (353)
Q Consensus 160 ~a~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~ 234 (353)
++......... ....++..|+|||.+.+. .++.++|||||||++|+|++|..||...... ....... .+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~ 229 (283)
T cd05080 153 LAKAVPEGHEYYRVREDGDSPVFWYAVECLKEN-KFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMT 229 (283)
T ss_pred cccccCCcchhhccCCCCCCCceeeCHhHhccc-CCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccc
Confidence 99865443221 122346679999998654 4899999999999999999999998654421 1111110 00000
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+.. ..........+...+.++.+++.+||+.||++|||++++++
T Consensus 230 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 230 VVRLIE------------LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhhhh------------hhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000000 00001111123457899999999999999999999999874
No 312
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-40 Score=296.23 Aligned_cols=248 Identities=24% Similarity=0.345 Sum_probs=194.8
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
...+|.+.+.||+|+||.||++++.. ++..+++|.+.... ....+|+.+++.++||||+++++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 77 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG----- 77 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----
Confidence 35679999999999999999998643 45678999885442 34568999999999999999999873
Q ss_pred CceeEEEEecccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEE
Q 018619 80 NELFLNLVMEYVP-ESMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 146 (353)
Q Consensus 80 ~~~~~~lv~e~~~-~~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill 146 (353)
.....++||||++ ++|.+.+..... ....+++..++.++.||+.||+|||+ +|++||||||+||++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~Nil~ 156 (291)
T cd05094 78 DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLATRNCLV 156 (291)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEE
Confidence 3345889999997 577666654221 22458999999999999999999999 899999999999999
Q ss_pred eCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHH
Q 018619 147 DPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQ 222 (353)
Q Consensus 147 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~ 222 (353)
+. ++.++|+|||++........ .....++..|+|||.+.+. .++.++||||+||++|+|++ |..||...+..+.
T Consensus 157 ~~-~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 234 (291)
T cd05094 157 GA-NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 234 (291)
T ss_pred cc-CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 96 78899999999976543321 1233457789999998654 48899999999999999998 9999988776554
Q ss_pred HHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 223 LVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
...+... .. + ..+...+..+.+++.+||+.||++|||+.+++
T Consensus 235 ~~~~~~~--~~-----------------~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~ 276 (291)
T cd05094 235 IECITQG--RV-----------------L---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIY 276 (291)
T ss_pred HHHHhCC--CC-----------------C---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence 4332210 00 0 01124688999999999999999999999986
No 313
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.4e-41 Score=294.61 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=192.0
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCc--EEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCC-CCcee
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGE--TVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNELF 83 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~~ 83 (353)
+.+.+.||+|+||.||++....++. .||+|.+... .....+|+.+++.++||||+++++.++.... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3578899999999999999877765 6899987543 2234578999999999999999987654322 22234
Q ss_pred EEEEecccc-chHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYS--SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~--~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
.+++|||+. ++|...+.... .....+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~ 158 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS-KSFIHRDLAARNCMLNE-NMNVCVADFGL 158 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhheEEcC-CCCEEECCCCc
Confidence 679999998 56665553221 123458999999999999999999999 89999999999999996 78899999999
Q ss_pred ccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 161 AKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 161 a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
+........ .....+++.|+|||.+.+ ..++.++||||+||++|+|++ |..||.+....+....+.+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----- 232 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR----- 232 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC-----
Confidence 986543322 112234677999999855 458999999999999999999 8999988766554433322100
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
...+..++..+.++|.+||+.||.+|||+++++++
T Consensus 233 -----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 -----------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -----------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00123467889999999999999999999999753
No 314
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.5e-41 Score=294.47 Aligned_cols=245 Identities=24% Similarity=0.324 Sum_probs=197.8
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
..+|.+.+.||.|++|.||+|.+.. ++.+|+|.+.... ....+|+.+++.++||||+++++.+. .....+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 78 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEPVY 78 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCCeE
Confidence 4679999999999999999999877 8899999886543 23457999999999999999988873 334488
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
+||||+++ +|.+.+... ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||.+...
T Consensus 79 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~h~dl~~~nilv~~-~~~~kl~d~g~~~~~ 154 (261)
T cd05148 79 IITELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEE-QNSIHRDLAARNILVGE-DLVCKVADFGLARLI 154 (261)
T ss_pred EEEeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccCcceEEEcC-CceEEEccccchhhc
Confidence 99999985 777766542 34568999999999999999999999 79999999999999996 788999999999765
Q ss_pred ccCCC-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 165 IAGEA-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 165 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
..... .....++..|+|||.+.+ ..++.++|+|||||++|+|++ |..||...+..+.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------- 223 (261)
T cd05148 155 KEDVYLSSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM---------- 223 (261)
T ss_pred CCccccccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC----------
Confidence 43221 112334678999999855 458899999999999999998 89999887766665554431110
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+...++.+.+++.+||+.||.+|||+.++++
T Consensus 224 ------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 ------------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 012347889999999999999999999999864
No 315
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=7.6e-41 Score=290.38 Aligned_cols=238 Identities=34% Similarity=0.578 Sum_probs=196.1
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
||+|++|.||++.+..+++.||+|.+.+.. ....+|+.+++.++|||++++++.+ ......|++|||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 699999999999999899999999886532 2445789999999999999999887 4455689999999
Q ss_pred c-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCC-C
Q 018619 92 P-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-A 169 (353)
Q Consensus 92 ~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~-~ 169 (353)
. ++|.+.+.. ...+++..+..++.|++.||.|||+ ++++|+||+|+||+++. ++.++|+|||.+....... .
T Consensus 76 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~-~~~~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~~~~~~~ 149 (250)
T cd05123 76 PGGELFSHLSK----EGRFSEERARFYAAEIVLALEYLHS-LGIIYRDLKPENILLDA-DGHIKLTDFGLAKELSSEGSR 149 (250)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcceEEEcC-CCcEEEeecCcceecccCCCc
Confidence 5 566666543 4578999999999999999999999 79999999999999996 7889999999998654432 2
Q ss_pred cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCc
Q 018619 170 NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 249 (353)
Q Consensus 170 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
.....++..|+|||...+. ..+.++|+||+|+++|+|++|..||...+.......+.. . .
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~-~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~---------------~-- 209 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGK-GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--D---------------P-- 209 (250)
T ss_pred ccCCcCCccccChHHhCCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--C---------------C--
Confidence 3345678889999998654 478899999999999999999999987766444333322 0 0
Q ss_pred CCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCH---HHHhcCccc
Q 018619 250 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA---LEACAHPFF 297 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~---~~~l~hp~f 297 (353)
..++..++.++.++|++||..||++|||+ .++++||||
T Consensus 210 ----------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 210 ----------LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ----------CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 01234468899999999999999999999 999999998
No 316
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.8e-41 Score=291.86 Aligned_cols=246 Identities=25% Similarity=0.324 Sum_probs=194.5
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+..++|++.+.||+|++|.||+|.+. .+..+|+|.+.... ....+|+.+++.++|+|++++++.+. . ..
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-----~-~~ 74 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-----E-EP 74 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-----C-CC
Confidence 355788999999999999999999865 56679999886532 34568999999999999999988652 1 12
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|||+.+ +|.+.+.. .....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.++|+|||++.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~Nili~~-~~~~~l~dfg~~~ 150 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYIER-MNYIHRDLRSANILVGD-GLVCKIADFGLAR 150 (260)
T ss_pred cEEEEEecCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEEeC-CceEEeCCceeee
Confidence 6799999985 66666643 234568999999999999999999999 79999999999999996 7889999999997
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
........ ....++..|+|||.+.+. .++.++|+||||+++|+|++ |.+||.+.+..+....+......
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------- 222 (260)
T cd05070 151 LIEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM------- 222 (260)
T ss_pred eccCcccccccCCCCCccccChHHHhcC-CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-------
Confidence 65433211 122345679999998554 48899999999999999999 89999887766555444321000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
..+...+..+.+|+.+||+.||++|||+++++
T Consensus 223 ---------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 223 ---------------------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred ---------------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 01234688999999999999999999999885
No 317
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-40 Score=290.55 Aligned_cols=245 Identities=24% Similarity=0.368 Sum_probs=196.7
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+..++|++.+.||+|++|.||++.. .|+.||+|.+..... ...+|+.+++.++|+||+++++.+.. ...
T Consensus 2 ~~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 74 (256)
T cd05039 2 AINSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNP 74 (256)
T ss_pred ccChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCC
Confidence 35678999999999999999999986 488999999976543 45579999999999999999998743 334
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.++||||++ ++|.+.+... ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||.+.
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~Nili~~-~~~~~l~d~g~~~ 150 (256)
T cd05039 75 LYIVTEYMAKGSLVDYLRSR--GRAVITLAQQLGFALDVCEGMEYLEE-KNFVHRDLAARNVLVSE-DLVAKVSDFGLAK 150 (256)
T ss_pred eEEEEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCccchhcccceEEEeC-CCCEEEccccccc
Confidence 889999998 5777666532 22368999999999999999999999 89999999999999996 8889999999998
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
....... ....+..|+|||.+.+. .++.++|+||+|+++|+|++ |..||...+..+....+...
T Consensus 151 ~~~~~~~--~~~~~~~~~ape~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~------------ 215 (256)
T cd05039 151 EASQGQD--SGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG------------ 215 (256)
T ss_pred ccccccc--cCCCcccccCchhhcCC-cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC------------
Confidence 6633222 23345679999998554 48889999999999999997 99999877655543332221
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
+....+...++++.++|.+||..+|++|||+.+++.
T Consensus 216 ----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 216 ----------------YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred ----------------CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 000112346899999999999999999999999874
No 318
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.4e-40 Score=296.79 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=196.0
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEEC-----CCCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFF 74 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~ 74 (353)
+.+..++|.+.+.||+|+||.||++.+. .++..||+|.+.... ....+|+.+++.+ +||||+++++.+.
T Consensus 30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 4566789999999999999999999753 345689999886432 2345799999999 7999999999873
Q ss_pred ecCCCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcE
Q 018619 75 STTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQV 153 (353)
Q Consensus 75 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~v 153 (353)
....++++|||+. ++|.+.+.. .....+++..+..++.|++.||+|||+ ++|+|+||||+||+++. ++.+
T Consensus 110 -----~~~~~~lv~e~~~~~~L~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~-~~~~ 180 (302)
T cd05055 110 -----IGGPILVITEYCCYGDLLNFLRR--KRESFLTLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNVLLTH-GKIV 180 (302)
T ss_pred -----cCCceEEEEEcCCCCcHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeehhhhccceEEEcC-CCeE
Confidence 3334889999998 566666643 122348999999999999999999999 79999999999999985 7889
Q ss_pred EEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 018619 154 KICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 229 (353)
Q Consensus 154 kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~ 229 (353)
+|+|||++......... ....++..|+|||.+.+. .++.++||||+||++|+|++ |..||......+........
T Consensus 181 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~ 259 (302)
T cd05055 181 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE 259 (302)
T ss_pred EECCCcccccccCCCceeecCCCCcccccCCHhhhccC-CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc
Confidence 99999999865433221 122346789999998654 48999999999999999998 99999877655544333321
Q ss_pred hCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 230 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.. ....+...++++.+++.+||..||++|||+.++++
T Consensus 260 ~~---------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 260 GY---------------------------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CC---------------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 00 00012346889999999999999999999999874
No 319
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.4e-40 Score=289.19 Aligned_cols=245 Identities=25% Similarity=0.314 Sum_probs=193.9
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+..++|++.+.||+|++|.||++.+..+ ..+|+|.+.... ....+|+.+++.++|||++++++++. . ...
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~~~ 75 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-----E-EPI 75 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-----C-CCc
Confidence 4568899999999999999999987655 469999876443 23457999999999999999987762 1 236
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+++|||+.+ +|.+.+... ....+++..+..++.|++.||.|||+ +|++|+||||+||++++ ++.++|+|||++..
T Consensus 76 ~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dl~~~Nill~~-~~~~~l~dfg~~~~ 151 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIER-MNYIHRDLRAANILVGD-NLVCKIADFGLARL 151 (260)
T ss_pred EEEEEcCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcC-CCeEEECCCccceE
Confidence 799999985 777776542 23458899999999999999999999 79999999999999996 78899999999976
Q ss_pred cccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 164 LIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 164 ~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
....... ....++..|+|||...+. .++.++|+||+||++|+|++ |..||.+....+....+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------- 221 (260)
T cd05069 152 IEDNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR--------- 221 (260)
T ss_pred ccCCcccccCCCccchhhCCHHHhccC-CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---------
Confidence 5332211 123456779999988554 48999999999999999999 9999988776655544332100
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
...+...+..+.+++++||+.||.+||++++++
T Consensus 222 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 254 (260)
T cd05069 222 -------------------MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQ 254 (260)
T ss_pred -------------------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 011234688999999999999999999999886
No 320
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.1e-40 Score=294.34 Aligned_cols=247 Identities=24% Similarity=0.328 Sum_probs=193.6
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCc----EEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
++...+|++.+.||+|+||+||+|.+..+++ .||+|.+.... ....+|+.+++.++||||+++++.+..
T Consensus 3 ~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-- 80 (279)
T cd05109 3 ILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-- 80 (279)
T ss_pred ccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC--
Confidence 5677899999999999999999999877776 48999875332 234578899999999999999887732
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
...++++||++ |++.+.+.. ....+++..+..++.|++.||+|||+ ++++||||||+||+++. ++.+||+
T Consensus 81 ----~~~~l~~~~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~iiH~dlkp~Nil~~~-~~~~kL~ 151 (279)
T cd05109 81 ----STVQLVTQLMPYGCLLDYVRE---NKDRIGSQDLLNWCVQIAKGMSYLEE-VRLVHRDLAARNVLVKS-PNHVKIT 151 (279)
T ss_pred ----CCcEEEEEcCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcC-CCcEEEC
Confidence 12568999998 576666543 24578999999999999999999999 79999999999999985 7789999
Q ss_pred eeccccccccCCCcc---eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 018619 157 DFGSAKQLIAGEANI---SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 157 Dfg~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|||+++......... ...+++.|+|||.+.+. .++.++|||||||++|+|++ |..||.......... .+.....
T Consensus 152 dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~ 229 (279)
T cd05109 152 DFGLARLLDIDETEYHADGGKVPIKWMALESILHR-RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD-LLEKGER 229 (279)
T ss_pred CCCceeecccccceeecCCCccchhhCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHCCCc
Confidence 999998664333221 12346679999998654 48999999999999999998 999997766544332 2221110
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
++ .+...+.++.++|.+||+.||++|||+.++++
T Consensus 230 ~~---------------------------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 230 LP---------------------------QPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CC---------------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 11246889999999999999999999999983
No 321
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.3e-40 Score=296.22 Aligned_cols=256 Identities=20% Similarity=0.242 Sum_probs=195.7
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCC----------------cEEEEEEeeccc-----cchHHHHHHHHHcCCCcee
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETG----------------ETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVI 67 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv 67 (353)
...+|++.+.||+|+||.||+|.+..++ ..||+|.+.... ....+|+.+++.++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence 4578999999999999999999876544 558999886542 2345799999999999999
Q ss_pred ecceeeeecCCCCceeEEEEecccc-chHHHHHHhhhh-------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccC
Q 018619 68 SLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSS-------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL 139 (353)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~-------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl 139 (353)
++++++.. ....+++||++. ++|...+..... ....+++..++.++.|++.||+|||+ +|++|+||
T Consensus 83 ~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~i~H~dl 156 (296)
T cd05051 83 RLLGVCTV-----DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES-LNFVHRDL 156 (296)
T ss_pred EEEEEEec-----CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccccc
Confidence 99988733 345889999998 467666654321 12368999999999999999999999 79999999
Q ss_pred CCCcEEEeCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh--CCCCC
Q 018619 140 KPQNLLVDPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLF 214 (353)
Q Consensus 140 kp~Nill~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~--g~~pf 214 (353)
||+||+++. ++.++|+|||++........ .....+++.|+|||.+.+. .++.++||||+||++|+|++ |..||
T Consensus 157 kp~Nili~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 157 ATRNCLVGK-NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG-KFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred chhceeecC-CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcC-CCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 999999996 78899999999876533321 1223456789999998654 48999999999999999998 77888
Q ss_pred CCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 215 PGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+..+.+............ ......+...+.++.+++.+||+.||.+|||+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 235 EHLTDQQVIENAGHFFRDDGR---------------------QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CCcChHHHHHHHHhccccccc---------------------cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 776665554444332111000 0000012346789999999999999999999999953
No 322
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-40 Score=290.40 Aligned_cols=247 Identities=25% Similarity=0.324 Sum_probs=196.1
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
-+..++|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+|+.+++.++|+|++++++.+. . ..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~~ 74 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-----Q-EP 74 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-----c-CC
Confidence 35678999999999999999999985 467889999886543 34467999999999999999988652 1 23
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|||+. ++|.+.+.. ..+..+++..+..++.|++.||+|||+ .|++|+||||+||+++. ++.++|+|||++.
T Consensus 75 ~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~ 150 (260)
T cd05067 75 IYIITEYMENGSLVDFLKT--PEGIKLTINKLIDMAAQIAEGMAFIER-KNYIHRDLRAANILVSE-TLCCKIADFGLAR 150 (260)
T ss_pred cEEEEEcCCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHHhEEEcC-CCCEEEccCccee
Confidence 789999997 466666543 234578999999999999999999999 79999999999999996 7889999999997
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
........ ....++..|+|||.+.+. .++.++|+||+|+++|+|++ |.+||.+.+..+....+......
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------- 222 (260)
T cd05067 151 LIEDNEYTAREGAKFPIKWTAPEAINYG-TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM------- 222 (260)
T ss_pred ecCCCCcccccCCcccccccCHHHhccC-CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC-------
Confidence 65422211 123346789999998554 48899999999999999998 99999887765554443221110
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+...+.++.++|.+||+.||++|||++++++
T Consensus 223 ---------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 223 ---------------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ---------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 012346889999999999999999999998863
No 323
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.4e-40 Score=291.76 Aligned_cols=246 Identities=24% Similarity=0.311 Sum_probs=193.9
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCc---EEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
...+|.+.+.||+|+||.||+|.++.++. .+|+|.+.... ....+|+.+++.++||||+++++++. .
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 76 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----K 76 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----c
Confidence 45789999999999999999999875543 79999885432 34467999999999999999998873 3
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
...+|+||||+++ +|.+.+.. ....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.++|+|||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlkp~nili~~-~~~~~l~dfg 151 (267)
T cd05066 77 SKPVMIVTEYMENGSLDAFLRK---HDGQFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILVNS-NLVCKVSDFG 151 (267)
T ss_pred CCccEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeehhhchhcEEECC-CCeEEeCCCC
Confidence 3458899999985 56655543 23568999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCCcc----eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 160 SAKQLIAGEANI----SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 160 ~a~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
++.......... ...++..|+|||.+.+. .++.++|+||+||++|++++ |..||...+..+....+.+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-- 228 (267)
T cd05066 152 LSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL-- 228 (267)
T ss_pred cccccccccceeeecCCCccceeecCHhHhccC-ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC--
Confidence 998654432211 11224679999998654 48999999999999999886 99999887765554444321100
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+..+++.+.+++.+||+.+|.+|||+.++++
T Consensus 229 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 229 --------------------------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred --------------------------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 011246889999999999999999999999863
No 324
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.1e-40 Score=295.63 Aligned_cols=256 Identities=29% Similarity=0.467 Sum_probs=197.5
Q ss_pred eeeEeeeeecCCCeEEEEEEEC---CCCcEEEEEEeeccc--------cchHHHHHHHHHc-CCCceeecceeeeecCCC
Q 018619 12 SYMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR--------RYKNRELQLMRVM-DHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~--------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 79 (353)
+|.+.+.||+|++|.||++.+. .+++.||+|.+.+.. ....+|+.++..+ +||||+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4889999999999999999864 467889999886421 2345789999999 599999999887 3
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
....+|+||||+.+ +|.+.+. ....+++..++.++.|++.||.|||+ .+++|+||||+||+++. ++.++|+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~ql~~~l~~lH~-~~~~H~dl~p~nil~~~-~~~~~l~df 149 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLY----QREHFTESEVRVYIAEIVLALDHLHQ-LGIIYRDIKLENILLDS-EGHVVLTDF 149 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHh----hcCCcCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECC-CCCEEEEEC
Confidence 44458899999985 5555543 34578999999999999999999999 79999999999999996 788999999
Q ss_pred ccccccccCCC--cceeeeeceeeChhhhhCCC-CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 159 GSAKQLIAGEA--NISYICSRFYRAPELIFGAT-EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 159 g~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
|++........ .....++..|+|||.+.+.. ..+.++|+||+|+++|+|++|..||...+.......+.+.....
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-- 227 (288)
T cd05583 150 GLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-- 227 (288)
T ss_pred ccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--
Confidence 99876543322 12345788999999985532 36789999999999999999999996543322222221110000
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC---HHHHhcCcccccccCC
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT---ALEACAHPFFDELREP 303 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t---~~~~l~hp~f~~~~~~ 303 (353)
....+..++.++.++|.+||+.||++||| +.++|+||||+.+.+.
T Consensus 228 -----------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~ 275 (288)
T cd05583 228 -----------------------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWD 275 (288)
T ss_pred -----------------------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHH
Confidence 00122347889999999999999999998 5678999999987653
No 325
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5e-42 Score=309.04 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=197.5
Q ss_pred eeeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 5 CCILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
.|.+-.+...+...||+|.||+||++++- ..||||++..+ .+.+++|+.++++-+|.||+-+.+++
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~----- 457 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC----- 457 (678)
T ss_pred ccccCHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh-----
Confidence 35566677889999999999999999863 36999999643 34567899999999999999998887
Q ss_pred CCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 79 KNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
.... +.||+.+|.| +|+..+.. ....|.....+.|+.|++.|+.|||. ++|||||||..||++.+ +++|||+|
T Consensus 458 ~~p~-~AIiTqwCeGsSLY~hlHv---~etkfdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKSnNIFl~~-~~kVkIgD 531 (678)
T KOG0193|consen 458 MNPP-LAIITQWCEGSSLYTHLHV---QETKFDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKSNNIFLHE-DLKVKIGD 531 (678)
T ss_pred cCCc-eeeeehhccCchhhhhccc---hhhhhhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccccceEEcc-CCcEEEec
Confidence 3333 3799999997 66666654 34679999999999999999999999 89999999999999996 79999999
Q ss_pred eccccccc---cCCCcceeeeeceeeChhhhhC--CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 018619 158 FGSAKQLI---AGEANISYICSRFYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 158 fg~a~~~~---~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
||++..-. .........|...|||||+++. ..+|++.||||||||++|||++|..||...+....+.++-+....
T Consensus 532 FGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~ 611 (678)
T KOG0193|consen 532 FGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLM 611 (678)
T ss_pred ccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccC
Confidence 99987432 2222334556788999999853 346899999999999999999999999955444333332221112
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
|.... ...+.+.++++|+..||.+++++||+..++|.
T Consensus 612 pd~s~------------------------~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 612 PDLSK------------------------IRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ccchh------------------------hhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 22111 22456789999999999999999999998874
No 326
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.4e-40 Score=293.85 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=194.5
Q ss_pred ecceeeEeeeeecCCCeEEEEEEEC-----CCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
...+|.+.+.||+|+||.||++... .++..+|+|.+.... ....+|+.+++.++|+||+++++.+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 77 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT----- 77 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----
Confidence 4578999999999999999999753 356789999875432 34567999999999999999988773
Q ss_pred CceeEEEEecccc-chHHHHHHhhhh-----------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEe
Q 018619 80 NELFLNLVMEYVP-ESMYRVLKHYSS-----------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVD 147 (353)
Q Consensus 80 ~~~~~~lv~e~~~-~~l~~~l~~~~~-----------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~ 147 (353)
.....+++|||+. ++|.+.+..... ....+++..+..++.|++.||+|||+ +|++|+||||+||+++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp~nil~~ 156 (280)
T cd05092 78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS-LHFVHRDLATRNCLVG 156 (280)
T ss_pred cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH-CCeecccccHhhEEEc
Confidence 3334889999998 467666654211 11358899999999999999999999 7999999999999999
Q ss_pred CCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHH
Q 018619 148 PLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQL 223 (353)
Q Consensus 148 ~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~ 223 (353)
. ++.+||+|||++........ .....+++.|+|||.+.+. .++.++|||||||++|+|++ |.+||......+..
T Consensus 157 ~-~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 234 (280)
T cd05092 157 Q-GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR-KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI 234 (280)
T ss_pred C-CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH
Confidence 6 78899999999875533221 1123346789999998654 48999999999999999998 99999877766555
Q ss_pred HHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 224 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+..... ...+..+++.+.++|.+||+.||.+||++.++++
T Consensus 235 ~~~~~~~~----------------------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 235 ECITQGRE----------------------------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHcCcc----------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 44332100 0112347889999999999999999999999863
No 327
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-40 Score=296.15 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=195.0
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECC-------CCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLE-------TGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCF 73 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~ 73 (353)
.+..++|.+.+.||+|+||.||+|.+.. ....+|+|.+.... ....+|+.+++.+ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 4556899999999999999999998642 34579999876432 2345799999999 699999999987
Q ss_pred eecCCCCceeEEEEecccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCC
Q 018619 74 FSTTSKNELFLNLVMEYVP-ESMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLK 140 (353)
Q Consensus 74 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlk 140 (353)
. ....+|++|||+. ++|.+.+..... ....+++..+..++.|++.||.|||+ +|++|||||
T Consensus 88 ~-----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlk 161 (314)
T cd05099 88 T-----QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIHRDLA 161 (314)
T ss_pred c-----cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH-CCeeecccc
Confidence 3 3345889999998 577777754321 23468999999999999999999999 899999999
Q ss_pred CCcEEEeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCC
Q 018619 141 PQNLLVDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPG 216 (353)
Q Consensus 141 p~Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~ 216 (353)
|+||+++. ++.+||+|||+++........ ....++..|+|||.+.+ ..++.++||||+||++|+|++ |..||.+
T Consensus 162 p~Nill~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 162 ARNVLVTE-DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred ceeEEEcC-CCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 99999996 788999999999865432211 11223457999999865 458999999999999999998 8999988
Q ss_pred CChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 217 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.+..+....+.... ...++..++.++.+++.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 240 IPVEELFKLLREGH----------------------------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred CCHHHHHHHHHcCC----------------------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 77655554332210 00112356889999999999999999999999873
No 328
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.8e-40 Score=289.96 Aligned_cols=247 Identities=26% Similarity=0.349 Sum_probs=197.2
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
-+..++|++.+.||+|++|.||+|.+. .++.||+|.+.... ....+|+.+++.++|+||+++++++. ....
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 75 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCS-----EEEP 75 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeee-----cCCc
Confidence 356789999999999999999999975 55789999886542 34568999999999999999998873 3334
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|||+.+ +|.+.+.. .....+++..+..++.|++.|+.|||+ +|++|+||||+||+++. ++.+||+|||++.
T Consensus 76 ~~~v~e~~~~~~L~~~i~~--~~~~~~~~~~~~~~~~~i~~al~~lh~-~~i~h~di~p~nili~~-~~~~~l~d~g~~~ 151 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKS--GEGKKLRLPQLVDMAAQIAEGMAYLES-RNYIHRDLAARNILVGE-NLVCKIADFGLAR 151 (261)
T ss_pred eEEEEeccCCCCHHHHHhc--cccCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcchheEEEcC-CCCEEECccccce
Confidence 8899999985 66666643 223568999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
........ .....+..|+|||.+.+. .++.++|+||+||++|+|++ |+.||.+.+.......+......+
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~------ 224 (261)
T cd05034 152 LIEDDEYTAREGAKFPIKWTAPEAANYG-RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP------ 224 (261)
T ss_pred eccchhhhhhhccCCCccccCHHHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC------
Confidence 65432111 122335679999998654 48999999999999999998 999998877666555543311100
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.+...+.++.+++.+||+.||.+||++++++
T Consensus 225 ----------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~ 255 (261)
T cd05034 225 ----------------------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQ 255 (261)
T ss_pred ----------------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 1123578999999999999999999999886
No 329
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.3e-40 Score=290.56 Aligned_cols=247 Identities=22% Similarity=0.307 Sum_probs=194.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCc---EEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
+..++|+..+.||+|++|.||+|.+..+++ .+|+|.+.... .....|+.+++.++|||++++.+++.
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 76 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT----- 76 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----
Confidence 346789999999999999999999876654 79999885432 23457899999999999999998883
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
.....++||||+++ +|...+.. ....+++..+..++.|++.|++|||+ +|++|+||||+||+++. ++.+||+||
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nili~~-~~~~kl~df 151 (268)
T cd05063 77 KFKPAMIITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSD-MNYVHRDLAARNILVNS-NLECKVSDF 151 (268)
T ss_pred cCCCcEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEEcC-CCcEEECCC
Confidence 33347899999995 55555432 34678999999999999999999999 79999999999999996 788999999
Q ss_pred ccccccccCCCcc----eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCC
Q 018619 159 GSAKQLIAGEANI----SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTP 233 (353)
Q Consensus 159 g~a~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~ 233 (353)
|++.......... ....+..|+|||.+.+. .++.++|+||+||++|+|++ |..||...+..+....+......+
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~ 230 (268)
T cd05063 152 GLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLP 230 (268)
T ss_pred ccceecccccccceeccCCCcCceecCHHHhhcC-CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCC
Confidence 9987654332211 11224569999998654 48899999999999999997 999998877665554443211110
Q ss_pred CHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 234 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.....+.++.+++.+||+.||++||++.++++
T Consensus 231 ----------------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 231 ----------------------------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred ----------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 01246889999999999999999999999874
No 330
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-40 Score=295.91 Aligned_cols=253 Identities=24% Similarity=0.347 Sum_probs=197.5
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEEC-------CCCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeeccee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCL-------ETGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHC 72 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~ 72 (353)
+.+..++|.+.+.||+|+||.||+|++. ..+..||+|.+.... ....+|+.+++.+ +||||+++++.
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 4577889999999999999999999753 234579999885432 2355799999999 89999999998
Q ss_pred eeecCCCCceeEEEEecccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccC
Q 018619 73 FFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL 139 (353)
Q Consensus 73 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl 139 (353)
+. .....|++|||+. ++|.+.+..... ....+++..+..++.|++.||+|||+ +|++||||
T Consensus 90 ~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~givH~dl 163 (304)
T cd05101 90 CT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDL 163 (304)
T ss_pred Ee-----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH-CCeeeccc
Confidence 73 3345889999998 477777654321 12457888999999999999999999 79999999
Q ss_pred CCCcEEEeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCC
Q 018619 140 KPQNLLVDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFP 215 (353)
Q Consensus 140 kp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~ 215 (353)
||+||+++. ++.+||+|||+++........ ....+++.|+|||.+.+. .++.++|||||||++|+|++ |..||.
T Consensus 164 kp~Nili~~-~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 164 AARNVLVTE-NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred ccceEEEcC-CCcEEECCCccceecccccccccccCCCCCceeeCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 999999996 788999999999865433221 122346789999998654 58999999999999999998 889998
Q ss_pred CCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 216 GENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+.+..+....+..... ...+..++.++.+|+.+||+.+|.+|||+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 242 GIPVEELFKLLKEGHR----------------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred cCCHHHHHHHHHcCCc----------------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 7776555443322100 00123578899999999999999999999999754
No 331
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.3e-40 Score=302.21 Aligned_cols=255 Identities=25% Similarity=0.364 Sum_probs=193.2
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEE-----CCCCcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKC-----LETGETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFF 74 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~ 74 (353)
|.+..++|++.+.||+|+||.||+|.+ ..+++.||||.+.... ....+|+.++..+ +||||+++++++.
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 455678999999999999999999984 3467899999886432 2345799999999 6899999998774
Q ss_pred ecCCCCceeEEEEecccc-chHHHHHHhhhh-------------------------------------------------
Q 018619 75 STTSKNELFLNLVMEYVP-ESMYRVLKHYSS------------------------------------------------- 104 (353)
Q Consensus 75 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------------------------------------------------- 104 (353)
.. ...++++||||+ |+|.+.+.....
T Consensus 82 ~~----~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (343)
T cd05103 82 KP----GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKS 157 (343)
T ss_pred cC----CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCc
Confidence 32 234789999998 466666543210
Q ss_pred --------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc
Q 018619 105 --------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN 170 (353)
Q Consensus 105 --------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~ 170 (353)
....+++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~-~~~~kl~dfg~~~~~~~~~~~ 235 (343)
T cd05103 158 LSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDY 235 (343)
T ss_pred cccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCccCeEEEcC-CCcEEEEecccccccccCcch
Confidence 01347888889999999999999999 79999999999999996 788999999998765332211
Q ss_pred ---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 171 ---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 171 ---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
....++..|+|||.+.+. .++.++||||+||++|+|++ |..||..................
T Consensus 236 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------- 300 (343)
T cd05103 236 VRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-------------- 300 (343)
T ss_pred hhcCCCCCCcceECcHHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCC--------------
Confidence 112345679999998654 48999999999999999996 99999775443322222211000
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
...+...++++.+++.+||+.||.+|||+.++++|
T Consensus 301 -------------~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 301 -------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred -------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00112367889999999999999999999999876
No 332
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=286.08 Aligned_cols=258 Identities=25% Similarity=0.426 Sum_probs=209.1
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHc-CCCceeecceeeeecCC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVM-DHPNVISLKHCFFSTTS 78 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 78 (353)
.+.-.+|.+.++||+|+|.+|-+++.+.|.+.||+|++++.- ...+.|..+..+- +||.+|.++.+|
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf----- 320 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF----- 320 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh-----
Confidence 345578999999999999999999999999999999886532 2234566666554 799999999998
Q ss_pred CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 79 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
+.+..+++|.||++|+ .+..+......++++.++.+..+|+.||.|||+ +||++||||.+|+|+|. .+.+||+|+
T Consensus 321 qtesrlffvieyv~gg---dlmfhmqrqrklpeeharfys~ei~lal~flh~-rgiiyrdlkldnvllda-eghikltdy 395 (593)
T KOG0695|consen 321 QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEICLALNFLHE-RGIIYRDLKLDNVLLDA-EGHIKLTDY 395 (593)
T ss_pred cccceEEEEEEEecCc---ceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhh-cCeeeeeccccceEEcc-CCceeeccc
Confidence 6666699999999975 222233456789999999999999999999999 89999999999999997 778999999
Q ss_pred ccccccc-cCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCC-------CChHHHHHHHHHHh
Q 018619 159 GSAKQLI-AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG-------ENAVDQLVEIIKVL 230 (353)
Q Consensus 159 g~a~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~-------~~~~~~~~~~~~~~ 230 (353)
|.|+.-. ++...++.+|||.|.|||++.|.. |+.++|+|+|||+++||+.|+.||.- .+..+.+.+++-.
T Consensus 396 gmcke~l~~gd~tstfcgtpnyiapeilrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile- 473 (593)
T KOG0695|consen 396 GMCKEGLGPGDTTSTFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE- 473 (593)
T ss_pred chhhcCCCCCcccccccCCCcccchhhhcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh-
Confidence 9998643 445566789999999999998764 99999999999999999999999952 2223333332210
Q ss_pred CCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC------HHHHhcCcccccccCC
Q 018619 231 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT------ALEACAHPFFDELREP 303 (353)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t------~~~~l~hp~f~~~~~~ 303 (353)
+ ...++..+|-.+..+++..|.+||.+|.. ..++..||||+.+.|.
T Consensus 474 -------------------------k--qiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd 525 (593)
T KOG0695|consen 474 -------------------------K--QIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD 525 (593)
T ss_pred -------------------------h--cccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence 0 11134567888899999999999999985 5799999999988775
No 333
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.9e-41 Score=323.61 Aligned_cols=256 Identities=30% Similarity=0.448 Sum_probs=193.2
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeec---------
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFST--------- 76 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------- 76 (353)
.+|+..+.||+||||.||+|+++-+|+.||||+++-. ...+.+|+.+|.+|+|||||+++..|...
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 3567889999999999999999999999999999654 23345899999999999999987544100
Q ss_pred ---------------------------------------------C---------C----------------------C-
Q 018619 77 ---------------------------------------------T---------S----------------------K- 79 (353)
Q Consensus 77 ---------------------------------------------~---------~----------------------~- 79 (353)
. + +
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence 0 0 0
Q ss_pred ----------------------------CceeEEEEeccccchHHHHHHhhhhcCCCC-CHHHHHHHHHHHHHHHHHhHc
Q 018619 80 ----------------------------NELFLNLVMEYVPESMYRVLKHYSSANQRM-PLIYVKLYTYQIFRGLAYIHT 130 (353)
Q Consensus 80 ----------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l-~~~~~~~i~~qll~al~~LH~ 130 (353)
....+||=||||+.+++..+.. .+... ....+|++++||++||.|+|+
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~---~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIR---RNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHH---hcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0056899999999876665543 22222 578899999999999999999
Q ss_pred CCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc-------------------cCCCcceeeeeceeeChhhhhCCC--
Q 018619 131 VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI-------------------AGEANISYICSRFYRAPELIFGAT-- 189 (353)
Q Consensus 131 ~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~-------------------~~~~~~~~~~t~~y~aPE~~~~~~-- 189 (353)
.|||||||||.||++++ ++.|||+|||+|.... +....++.+||..|+|||++.+..
T Consensus 716 -~giIHRDLKP~NIFLd~-~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 716 -QGIIHRDLKPRNIFLDS-RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred -CceeeccCCcceeEEcC-CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 69999999999999996 7789999999998611 011235678999999999996655
Q ss_pred CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChh
Q 018619 190 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPE 269 (353)
Q Consensus 190 ~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (353)
.|+.++|+||||+|++||+. ||.. ..+.... +..+..+.. |.. ..|..+--+.
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~T--sMERa~i-L~~LR~g~i---------------P~~------~~f~~~~~~~ 846 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGT--SMERASI-LTNLRKGSI---------------PEP------ADFFDPEHPE 846 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCc--hHHHHHH-HHhcccCCC---------------CCC------cccccccchH
Confidence 69999999999999999994 4543 2333322 222222211 110 1122223446
Q ss_pred HHHHHHHhcCcCCCCCCCHHHHhcCcccc
Q 018619 270 AIDLASRLLQYSPSLRCTALEACAHPFFD 298 (353)
Q Consensus 270 ~~~li~~~L~~dp~~R~t~~~~l~hp~f~ 298 (353)
-..+|++||+.||++||||.|+|++.||-
T Consensus 847 e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 847 EASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 67899999999999999999999999996
No 334
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.6e-40 Score=290.41 Aligned_cols=246 Identities=24% Similarity=0.357 Sum_probs=193.2
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCc---EEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+...|.+.+.||+|+||.||+|.++.+++ .||+|.+... ...+..|+.+++.++||||+++.+++ ..
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~ 76 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TK 76 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CC
Confidence 34679999999999999999999887665 5999988643 12345799999999999999999887 33
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
....++||||+++ +|.+.+.. ..+.+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~l~~al~~lH~-~g~~H~dl~p~nili~~-~~~~kl~dfg 151 (269)
T cd05065 77 SRPVMIITEFMENGALDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLSE-MNYVHRDLAARNILVNS-NLVCKVSDFG 151 (269)
T ss_pred CCceEEEEecCCCCcHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccChheEEEcC-CCcEEECCCc
Confidence 4458899999985 55555543 24568999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCCccee---e---eeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 018619 160 SAKQLIAGEANISY---I---CSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 160 ~a~~~~~~~~~~~~---~---~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
++............ . .+..|+|||.+.+ ..++.++||||+||++|+|++ |..||...+..+....+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~- 229 (269)
T cd05065 152 LSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR- 229 (269)
T ss_pred cccccccCccccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc-
Confidence 98755433221111 1 1357999999855 458999999999999999886 9999988776655444322100
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.+ .+..++..+.+++.+||+.||++||++.+++.
T Consensus 230 -----------------~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 230 -----------------LP----------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred -----------------CC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 11246789999999999999999999999874
No 335
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-40 Score=299.20 Aligned_cols=253 Identities=24% Similarity=0.344 Sum_probs=196.7
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCC-------CcEEEEEEeeccc-----cchHHHHHHHHHc-CCCceeeccee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLET-------GETVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHC 72 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~ 72 (353)
|.+...+|.+.+.||+|+||.||+|.+... +..||+|.+.... ....+|+.+++.+ +||||+++++.
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 445667899999999999999999986432 2368999876432 2345799999999 79999999998
Q ss_pred eeecCCCCceeEEEEeccccc-hHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccC
Q 018619 73 FFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL 139 (353)
Q Consensus 73 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl 139 (353)
+. ....+++++||+++ +|.+.+..... ....++...+..++.|++.||+|||+ +|++||||
T Consensus 87 ~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~givH~dl 160 (334)
T cd05100 87 CT-----QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS-QKCIHRDL 160 (334)
T ss_pred Ec-----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCeecccc
Confidence 83 33448899999984 77777654321 23457888899999999999999999 79999999
Q ss_pred CCCcEEEeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCC
Q 018619 140 KPQNLLVDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFP 215 (353)
Q Consensus 140 kp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~ 215 (353)
||+||+++. ++.+||+|||+++........ ....++..|+|||++.+. .++.++||||+||++|+|++ |..||.
T Consensus 161 kp~Nill~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 161 AARNVLVTE-DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred ccceEEEcC-CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccC-CcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 999999996 788999999999765432211 112335679999998654 48899999999999999998 889998
Q ss_pred CCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 216 GENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+.+..+....+..... ...+...+.++.+++.+||+.+|.+|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 239 GIPVEELFKLLKEGHR----------------------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred CCCHHHHHHHHHcCCC----------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 8776655444322100 01123468899999999999999999999999876
No 336
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.5e-40 Score=292.21 Aligned_cols=250 Identities=20% Similarity=0.274 Sum_probs=196.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECC----CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLE----TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
+.+++|.+.+.||+|+||.||++.+.. ++..|++|.+.... ....+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-- 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-- 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC--
Confidence 567899999999999999999999875 35789999886432 2345799999999999999999876432
Q ss_pred CCceeEEEEecccc-chHHHHHHhhhhc----CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcE
Q 018619 79 KNELFLNLVMEYVP-ESMYRVLKHYSSA----NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQV 153 (353)
Q Consensus 79 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~----~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~v 153 (353)
....+++++|++ ++|...+...... ...+++..++.++.|++.||+|||+ ++++|+||||+||+++. ++.+
T Consensus 81 --~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~-~~~~ 156 (280)
T cd05043 81 --GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDE-ELQV 156 (280)
T ss_pred --CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcC-CCcE
Confidence 234779999998 5777766543222 1568999999999999999999999 79999999999999996 7889
Q ss_pred EEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 018619 154 KICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 229 (353)
Q Consensus 154 kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~ 229 (353)
||+|||+++........ ....++..|+|||.+.+. .++.++||||+||++|++++ |..||...+..+....+...
T Consensus 157 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 235 (280)
T cd05043 157 KITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNK-EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG 235 (280)
T ss_pred EECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcC-CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC
Confidence 99999999865433221 122346679999998654 48999999999999999998 99999887665543322211
Q ss_pred hCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 230 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
. ..+ ....+++++.+++.+||+.||++|||+.+++
T Consensus 236 ~------------------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~ 270 (280)
T cd05043 236 Y------------------RLA----------QPINCPDELFAVMACCWALDPEERPSFSQLV 270 (280)
T ss_pred C------------------CCC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 0 000 1124688999999999999999999999987
No 337
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.7e-41 Score=290.16 Aligned_cols=228 Identities=25% Similarity=0.321 Sum_probs=180.7
Q ss_pred CCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccccc-hHHHHHH
Q 018619 22 GSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLK 100 (353)
Q Consensus 22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~ 100 (353)
|.+|.||+|++..+++.||+|.+.+... ..+|...+....||||+++++.+. ....++++|||+++ +|.+.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-YSRERLTIIPHCVPNMVCLHKYIV-----SEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-hhhHHHHHHhcCCCceeehhhhee-----cCCeEEEEEecCCCCCHHHHHH
Confidence 8899999999999999999999976543 334555556667999999999883 33458899999995 6666654
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCcceeeeeceee
Q 018619 101 HYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYR 180 (353)
Q Consensus 101 ~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~ 180 (353)
. ...+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.++++|||.+...... .....++..|+
T Consensus 78 ~----~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nil~~~-~~~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 78 K----FLNIPEECVKRWAAEMVVALDALHR-EGIVCRDLNPNNILLDD-RGHIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred H----hcCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcC-CCCEEEecccchhccccc--cccCCcCcccc
Confidence 3 3468999999999999999999999 79999999999999996 778999999987654332 22334567799
Q ss_pred ChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCcccc
Q 018619 181 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHK 260 (353)
Q Consensus 181 aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
|||.+.+ ..++.++|+||+||++|+|++|..||....... . ... ..
T Consensus 150 aPE~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~---------------~~~------------~~ 195 (237)
T cd05576 150 APEVGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSGI------N---------------THT------------TL 195 (237)
T ss_pred CCcccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------c---------------ccc------------cc
Confidence 9998854 457899999999999999999998874322100 0 000 00
Q ss_pred ccCCCCChhHHHHHHHhcCcCCCCCCCH-----HHHhcCccc
Q 018619 261 VFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFF 297 (353)
Q Consensus 261 ~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~~~l~hp~f 297 (353)
.++..+++.+.++|.+||+.||++|+|+ +++++||||
T Consensus 196 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 196 NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 1234578999999999999999999985 999999998
No 338
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.7e-40 Score=288.33 Aligned_cols=234 Identities=26% Similarity=0.340 Sum_probs=184.3
Q ss_pred eeecCCCeEEEEEEE--CCCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 18 VVGTGSFGIVFQAKC--LETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
.||+|+||.||+|.. ..+++.+|+|++.... ....+|+.+++.++||||+++++.+ .+. ..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~-~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGIC-----EAE-SWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCC-CcEEEEe
Confidence 689999999999854 4678899999885432 2345789999999999999998865 222 3679999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCC
Q 018619 90 YVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 168 (353)
Q Consensus 90 ~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~ 168 (353)
|+++ +|.+.+. ....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++.......
T Consensus 76 ~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~nill~~-~~~~kl~Dfg~~~~~~~~~ 149 (257)
T cd05116 76 LAELGPLNKFLQ----KNKHVTEKNITELVHQVSMGMKYLEE-TNFVHRDLAARNVLLVT-QHYAKISDFGLSKALGADE 149 (257)
T ss_pred cCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchhhEEEcC-CCeEEECCCccccccCCCC
Confidence 9995 5655554 34578999999999999999999999 79999999999999996 7889999999998654433
Q ss_pred Cc----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCc
Q 018619 169 AN----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 243 (353)
Q Consensus 169 ~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
.. ....++..|+|||.+.. ..++.++|+|||||++|+|++ |..||...+..+....+.+..
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~------------- 215 (257)
T cd05116 150 NYYKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE------------- 215 (257)
T ss_pred CeeeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-------------
Confidence 21 11223578999998854 458889999999999999998 999998877655544432210
Q ss_pred CCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 244 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
...++..+++++.++|.+||+.||++||+++++.
T Consensus 216 ---------------~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~ 249 (257)
T cd05116 216 ---------------RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVE 249 (257)
T ss_pred ---------------CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHH
Confidence 0012235789999999999999999999999885
No 339
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.8e-40 Score=293.35 Aligned_cols=246 Identities=25% Similarity=0.373 Sum_probs=190.1
Q ss_pred eeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCc
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 81 (353)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... ....+|+.+++.++||||+++++.+. ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 47899999999999999998753 23568888875432 23457999999999999999998873 33
Q ss_pred eeEEEEecccc-chHHHHHHhhh--------------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCC
Q 018619 82 LFLNLVMEYVP-ESMYRVLKHYS--------------------SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLK 140 (353)
Q Consensus 82 ~~~~lv~e~~~-~~l~~~l~~~~--------------------~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlk 140 (353)
...++++||+. ++|.+.+.... .....+++..++.++.|++.||+|||+ ++++|||||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~ivH~dik 154 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE-MKLVHRDLA 154 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH-CCeehhhhh
Confidence 44789999999 56666654321 122458899999999999999999999 799999999
Q ss_pred CCcEEEeCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCC
Q 018619 141 PQNLLVDPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPG 216 (353)
Q Consensus 141 p~Nill~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~ 216 (353)
|+||+++. ++.+||+|||++........ .....++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+
T Consensus 155 p~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 155 ARNVLVAE-GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hheEEEcC-CCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999996 78899999999975533222 112234667999999855 458999999999999999998 9999987
Q ss_pred CChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 217 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
....+......... ....+..++.++.+++.+||+.||.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 233 IAPERLFNLLKTGY----------------------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCHHHHHHHHhCCC----------------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 76554433221100 00112357889999999999999999999999863
No 340
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.9e-40 Score=290.89 Aligned_cols=263 Identities=27% Similarity=0.357 Sum_probs=191.3
Q ss_pred ecceeeEeeeeecCCCeEEEEEEE----CCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKC----LETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+..+|++.+.||+|+||.||.+.. ..+++.||+|.+.... ..+.+|+.+++.++||||+++++++....
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--- 78 (284)
T cd05081 2 EERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG--- 78 (284)
T ss_pred ccccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC---
Confidence 456899999999999999999873 4578899999886432 24468999999999999999988764432
Q ss_pred ceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
...+++||||++ ++|.+.+.. ....+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~aL~~LH~-~~i~H~dlkp~nili~~-~~~~~l~dfg 153 (284)
T cd05081 79 RRNLRLVMEYLPYGSLRDYLQK---HRERLDHRKLLLYASQICKGMEYLGS-KRYVHRDLATRNILVES-ENRVKIGDFG 153 (284)
T ss_pred CCceEEEEEecCCCCHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHhhEEECC-CCeEEECCCc
Confidence 234789999997 577666643 23568999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCCcc----eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCC
Q 018619 160 SAKQLIAGEANI----SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-TPT 234 (353)
Q Consensus 160 ~a~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~ 234 (353)
++.......... ...++..|+|||.+.+. .++.++|+||+||++|+|++|..++...... ....+..... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 231 (284)
T cd05081 154 LTKVLPQDKEYYKVREPGESPIFWYAPESLTES-KFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQGQMI 231 (284)
T ss_pred ccccccCCCcceeecCCCCCceEeeCHHHhccC-CcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhcccccccccc
Confidence 998654432211 11234569999998654 4899999999999999999998776543321 1110000000 000
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+...... ......+..++.++.+||.+||+.||++|||+.+++.
T Consensus 232 ~~~~~~~~~~------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 232 VYHLIELLKN------------NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred hHHHHHHHhc------------CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0000000000 0000112357889999999999999999999999874
No 341
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4e-40 Score=303.26 Aligned_cols=254 Identities=23% Similarity=0.341 Sum_probs=197.2
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEEC-----CCCcEEEEEEeeccc-----cchHHHHHHHHHcC-CCceeecceeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDR-----RYKNRELQLMRVMD-HPNVISLKHCFF 74 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~-h~~iv~~~~~~~ 74 (353)
+.+..++|.+.+.||+|+||.||+|++. .+++.||+|++.... ....+|+.++..+. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 4556678999999999999999999854 355789999996542 23457999999997 999999999883
Q ss_pred ecCCCCceeEEEEecccc-chHHHHHHhhhh-------------------------------------------------
Q 018619 75 STTSKNELFLNLVMEYVP-ESMYRVLKHYSS------------------------------------------------- 104 (353)
Q Consensus 75 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~------------------------------------------------- 104 (353)
. ...+++|||||. |+|.+.+.....
T Consensus 112 ~-----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 112 K-----GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred c-----CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 3 334889999999 577777653211
Q ss_pred ---------------------------------------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccC
Q 018619 105 ---------------------------------------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL 139 (353)
Q Consensus 105 ---------------------------------------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl 139 (353)
....+++..++.++.|++.||+|||+ ++++||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrdl 265 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS-KNCVHRDL 265 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcCcccC
Confidence 11246778889999999999999999 79999999
Q ss_pred CCCcEEEeCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCC
Q 018619 140 KPQNLLVDPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFP 215 (353)
Q Consensus 140 kp~Nill~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~ 215 (353)
||+|||++. ++.+||+|||+++....... .....+++.|+|||.+.+. .++.++||||+||++|+|++ |..||.
T Consensus 266 kp~NiLl~~-~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 266 AARNVLICE-GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN-LYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred CcceEEEeC-CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCC-CCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 999999996 78899999999986433221 1233567889999998654 58999999999999999998 899998
Q ss_pred CCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 216 GENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.....+.....+..-. ....+..++.++.+|+.+||+.||.+||+++++++.
T Consensus 344 ~~~~~~~~~~~~~~~~---------------------------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 344 ELPMNEQFYNAIKRGY---------------------------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCCchHHHHHHHHcCC---------------------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 7665554433332100 001223478999999999999999999999999754
No 342
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.3e-40 Score=294.69 Aligned_cols=256 Identities=21% Similarity=0.258 Sum_probs=192.7
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCC--------------cEEEEEEeeccc-----cchHHHHHHHHHcCCCceeec
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETG--------------ETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISL 69 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~--------------~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~ 69 (353)
..++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ....+|+++++.++|||++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 3578999999999999999999875432 358999886532 234579999999999999999
Q ss_pred ceeeeecCCCCceeEEEEeccccc-hHHHHHHhhhh--------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCC
Q 018619 70 KHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSS--------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLK 140 (353)
Q Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlk 140 (353)
++++. .....++||||+.+ +|.+.+..... ....+++..+..++.|++.||+|||+ +|++|+|||
T Consensus 83 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlk 156 (295)
T cd05097 83 LGVCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNFVHRDLA 156 (295)
T ss_pred EEEEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCeeccccC
Confidence 99883 33448899999985 66666543210 11247888999999999999999999 799999999
Q ss_pred CCcEEEeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh--CCCCCC
Q 018619 141 PQNLLVDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFP 215 (353)
Q Consensus 141 p~Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~--g~~pf~ 215 (353)
|+||+++. ++.+||+|||++......... ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.
T Consensus 157 p~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 157 TRNCLVGN-HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLG-KFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred hhhEEEcC-CCcEEecccccccccccCcceeccCcCcCceeecChhhhccC-CcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 99999996 778999999999765333211 122346789999998654 48999999999999999998 678888
Q ss_pred CCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 216 GENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+..+.+..+.+........ . ....+...++.+.+|+.+||+.||.+|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-------~--------------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 235 LLSDEQVIENTGEFFRNQGRQ-------I--------------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ccChHHHHHHHHHhhhhcccc-------c--------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 777665554433311100000 0 00011246889999999999999999999999863
No 343
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=9.6e-40 Score=290.38 Aligned_cols=257 Identities=17% Similarity=0.201 Sum_probs=186.8
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCC---CcEEEEEEeeccccchH---------------HHHHHHHHcCCCceeec
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLET---GETVAIKKVLQDRRYKN---------------RELQLMRVMDHPNVISL 69 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~---------------~E~~~l~~l~h~~iv~~ 69 (353)
+..++|.+.+.||+|+||.||+|.+..+ +..+|+|.......... .+...+..++|++++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 5578999999999999999999998877 66778775433222211 12233445689999999
Q ss_pred ceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC
Q 018619 70 KHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL 149 (353)
Q Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~ 149 (353)
+++..... ....+.+++++++..++.+.+.. ....++..++.++.|++.||+|||+ ++|+||||||+|||++.
T Consensus 89 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiHrDiKp~Nill~~- 161 (294)
T PHA02882 89 YGCGSFKR-CRMYYRFILLEKLVENTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHE-HGISHGDIKPENIMVDG- 161 (294)
T ss_pred EEeeeEec-CCceEEEEEEehhccCHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-
Confidence 88654332 22334678899887766655543 2345788899999999999999999 79999999999999996
Q ss_pred CCcEEEeeeccccccccCC--------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHH
Q 018619 150 THQVKICDFGSAKQLIAGE--------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD 221 (353)
Q Consensus 150 ~~~vkl~Dfg~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~ 221 (353)
++.++|+|||+|+...... ......||+.|+|||+..+. .++.++||||+||++|+|++|..||.+.+...
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~-~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~ 240 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA-CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG 240 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC-CCCcHHHHHHHHHHHHHHHhCCCCCCccccch
Confidence 7889999999998653221 11234689999999998654 58999999999999999999999998774332
Q ss_pred HHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 222 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
......+. ..+..+... .. .....++++.++++.|++.+|.+||+.+++++
T Consensus 241 ~~~~~~~~------~~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 241 NLIHAAKC------DFIKRLHEG--KI-------------KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHHhHH------HHHHHhhhh--hh-------------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 22221110 000000000 00 01246889999999999999999999999863
No 344
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=6.8e-40 Score=288.60 Aligned_cols=252 Identities=22% Similarity=0.300 Sum_probs=196.3
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeecccc-----chHHHHHHHHHcCCCceeecceeeeecC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDRR-----YKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
+..++|++.+.||+|+||.||+|+.+. +.+.|++|.+..... ...+|+.+++.++|+||+++++.+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---- 77 (275)
T cd05046 2 FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLC---- 77 (275)
T ss_pred CChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEE----
Confidence 345789999999999999999999754 346799998854332 356899999999999999999877
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhhc-----CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCC
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSSA-----NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH 151 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~-----~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~ 151 (353)
......++||||++ ++|.+.+...... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili~~-~~ 154 (275)
T cd05046 78 -REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLVSS-QR 154 (275)
T ss_pred -CCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh-cCcccCcCccceEEEeC-CC
Confidence 33445889999998 5776666543211 1268999999999999999999999 79999999999999996 78
Q ss_pred cEEEeeeccccccccCC--CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 018619 152 QVKICDFGSAKQLIAGE--ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 228 (353)
Q Consensus 152 ~vkl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~ 228 (353)
.++++|||++....... ......++..|+|||.+.+. .++.++||||+|+++|+|++ |..||...........+..
T Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~ 233 (275)
T cd05046 155 EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQED-DFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA 233 (275)
T ss_pred cEEEcccccccccCcccccccCCceeEEeecChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc
Confidence 89999999987543221 12234567789999998654 47899999999999999998 8899977665544433221
Q ss_pred HhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 229 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
. . +....+..++..+.+++.+||+.||.+|||+.+++++
T Consensus 234 ~-----------------~----------~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 234 G-----------------K----------LELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred C-----------------C----------cCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0 0 0001123578899999999999999999999999753
No 345
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-40 Score=290.44 Aligned_cols=292 Identities=28% Similarity=0.420 Sum_probs=217.2
Q ss_pred eeeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHcC-----C---Cceeecceee
Q 018619 5 CCILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRVMD-----H---PNVISLKHCF 73 (353)
Q Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~E~~~l~~l~-----h---~~iv~~~~~~ 73 (353)
+-.+..++|.+.++||=|-|++||+|.+..+.+.||+|+++.... ....|+++|++++ | .+||++++.|
T Consensus 72 GD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 72 GDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred cccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 445667999999999999999999999999999999999876543 3457999999883 2 4799999988
Q ss_pred eecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCC---
Q 018619 74 FSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLT--- 150 (353)
Q Consensus 74 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~--- 150 (353)
-... .+...+|+|+|+++.+|+..+... .-..++...++.|++|++.||.|||...||||.||||+|||+...+
T Consensus 152 khsG-pNG~HVCMVfEvLGdnLLklI~~s--~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~ 228 (590)
T KOG1290|consen 152 KHSG-PNGQHVCMVFEVLGDNLLKLIKYS--NYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDP 228 (590)
T ss_pred eecC-CCCcEEEEEehhhhhHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccch
Confidence 5443 556679999999999999998864 4466999999999999999999999977999999999999983100
Q ss_pred --------------------------------------------------------------------------------
Q 018619 151 -------------------------------------------------------------------------------- 150 (353)
Q Consensus 151 -------------------------------------------------------------------------------- 150 (353)
T Consensus 229 ~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~ 308 (590)
T KOG1290|consen 229 AKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPR 308 (590)
T ss_pred hhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 018619 151 -------------------------------------------------------------------------------- 150 (353)
Q Consensus 151 -------------------------------------------------------------------------------- 150 (353)
T Consensus 309 ~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~ 388 (590)
T KOG1290|consen 309 INGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPE 388 (590)
T ss_pred CCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCc
Confidence
Q ss_pred --CcEEEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCC------CChHHH
Q 018619 151 --HQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG------ENAVDQ 222 (353)
Q Consensus 151 --~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~------~~~~~~ 222 (353)
-+|||+|||.|.... ...+..+.|+.|+|||++.|.. |++.+||||++|+++||+||..+|.. ..+.+.
T Consensus 389 ~di~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH 465 (590)
T KOG1290|consen 389 CDIRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH 465 (590)
T ss_pred cceeEEEeeccchhhhh--hhhchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence 012223333222111 1111223477799999999876 99999999999999999999999954 346788
Q ss_pred HHHHHHHhCCCCHHHHhhcCcCCCCC----cC---CCCCCCccccccC------CCCChhHHHHHHHhcCcCCCCCCCHH
Q 018619 223 LVEIIKVLGTPTREEIRCMNPNYTDF----RF---PQIKAHPWHKVFH------KRMPPEAIDLASRLLQYSPSLRCTAL 289 (353)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~------~~~~~~~~~li~~~L~~dp~~R~t~~ 289 (353)
+..|++.+|..+......-.....-| .+ ..++..+....+. ..-..++.||+.-||+++|.+|+||.
T Consensus 466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~ 545 (590)
T KOG1290|consen 466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAA 545 (590)
T ss_pred HHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHH
Confidence 99999999988876543221111111 11 1112222111111 11234678999999999999999999
Q ss_pred HHhcCcccccccC
Q 018619 290 EACAHPFFDELRE 302 (353)
Q Consensus 290 ~~l~hp~f~~~~~ 302 (353)
++|+|||+..+-.
T Consensus 546 ~cl~hPwLn~~~~ 558 (590)
T KOG1290|consen 546 QCLKHPWLNPVAG 558 (590)
T ss_pred HHhcCccccCCCC
Confidence 9999999987643
No 346
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3e-40 Score=292.91 Aligned_cols=250 Identities=26% Similarity=0.318 Sum_probs=195.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
+..++|++.+.||+|+||.||+|.+.. ++..||+|.+.... ....+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~--- 78 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA--- 78 (288)
T ss_pred CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc---
Confidence 346789999999999999999998753 67889999886432 33557999999999999999998873
Q ss_pred CCCceeEEEEeccccc-hHHHHHHhhh------------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeecc
Q 018619 78 SKNELFLNLVMEYVPE-SMYRVLKHYS------------------SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRD 138 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~~-~l~~~l~~~~------------------~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~D 138 (353)
.....+++|||+++ +|.+.+.... .....+++..+..++.|++.||.|||+ ++++|||
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~i~H~d 155 (288)
T cd05050 79 --VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RKFVHRD 155 (288)
T ss_pred --CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CCeeccc
Confidence 33347899999984 7777765321 112347888999999999999999999 7999999
Q ss_pred CCCCcEEEeCCCCcEEEeeeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCC
Q 018619 139 LKPQNLLVDPLTHQVKICDFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLF 214 (353)
Q Consensus 139 lkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf 214 (353)
|||+||+++. ++.++|+|||++........ ......+..|+|||.+.+. .++.++|||||||++|+|++ |..||
T Consensus 156 l~p~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~~~~p~ 233 (288)
T cd05050 156 LATRNCLVGE-NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIFSYGMQPY 233 (288)
T ss_pred ccHhheEecC-CCceEECccccceecccCccccccCCCccChhhcCHHHHhcC-CCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 9999999996 78899999999875433221 1122345679999998654 48999999999999999997 88899
Q ss_pred CCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 215 PGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.+.+..+....+..... . ..+..++.++.+||.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~-------------------~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 234 YGMAHEEVIYYVRDGNV-------------------L---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCCCHHHHHHHHhcCCC-------------------C---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 87776655443322100 0 012346889999999999999999999999863
No 347
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.1e-40 Score=289.30 Aligned_cols=241 Identities=24% Similarity=0.335 Sum_probs=184.7
Q ss_pred eeeecCCCeEEEEEEECCCCc--EEEEEEeeccc-----cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETGE--TVAIKKVLQDR-----RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~-----~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||++....++. .+++|.+.... ....+|+.++..+ +||||+++++++. ....++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-----cCCCceEEE
Confidence 468999999999999888776 46888775321 2345799999999 7999999999883 334588999
Q ss_pred cccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEE
Q 018619 89 EYVP-ESMYRVLKHYSS------------ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKI 155 (353)
Q Consensus 89 e~~~-~~l~~~l~~~~~------------~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl 155 (353)
||++ ++|.+.+..... ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nili~~-~~~~kl 153 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGE-NYVAKI 153 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccccceEEEcC-CCeEEE
Confidence 9998 577777654221 12358899999999999999999999 89999999999999996 788999
Q ss_pred eeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 156 CDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 156 ~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
+|||++..............+..|+|||.+.+ ..++.++|+|||||++|+|++ |..||.+.+..+....+....
T Consensus 154 ~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---- 228 (270)
T cd05047 154 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---- 228 (270)
T ss_pred CCCCCccccchhhhccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC----
Confidence 99999863322111111223567999999854 458999999999999999997 999998766554443321100
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
....+..++.++.+++.+||..||.+|||++++++
T Consensus 229 ------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 229 ------------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------------------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 00012346889999999999999999999999874
No 348
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.5e-40 Score=286.01 Aligned_cols=246 Identities=24% Similarity=0.337 Sum_probs=194.7
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
-+..++|++.+.||+|+||.||++... .+..+|+|.+.... ....+|+.+++.++|+||+++++.+.. ..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~ 74 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EP 74 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CC
Confidence 456789999999999999999999854 55679999886533 334579999999999999999887732 23
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|||++ ++|.+.+... ....+++..+..++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||.+.
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~ 150 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSA-SLVCKIADFGLAR 150 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcC-CCcEEECCCccee
Confidence 789999998 5777666542 34567888999999999999999999 79999999999999996 7899999999987
Q ss_pred ccccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 163 QLIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 163 ~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
........ ....++..|+|||.+.+ ..++.++|+||+||++|++++ |..||.+.+..+....+......
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~------- 222 (260)
T cd05073 151 VIEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM------- 222 (260)
T ss_pred eccCCCcccccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC-------
Confidence 65432221 12234567999999865 458899999999999999998 99999887765554433221000
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
..+...+.++.+++.+||+.||++||++.+++
T Consensus 223 ---------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~ 254 (260)
T cd05073 223 ---------------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQ 254 (260)
T ss_pred ---------------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 01134788999999999999999999998875
No 349
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.5e-40 Score=292.34 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=191.2
Q ss_pred cceeeEeeeeecCCCeEEEEEEECC----------------CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLE----------------TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVIS 68 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~ 68 (353)
.++|++.+.||+|+||.||++.+.. ++..||+|.+.... ....+|+.+++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 4679999999999999999986432 34578999886432 23457999999999999999
Q ss_pred cceeeeecCCCCceeEEEEecccc-chHHHHHHhhhhc-------CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCC
Q 018619 69 LKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSA-------NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLK 140 (353)
Q Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~-------~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlk 140 (353)
+++++.. ...++++|||+. ++|.+.+...... ...+++..+..++.|++.||+|||+ +|++|+|||
T Consensus 84 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dlk 157 (296)
T cd05095 84 LLAVCIT-----SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LNFVHRDLA 157 (296)
T ss_pred EEEEEec-----CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCeecccCC
Confidence 9998733 334789999998 5776666542211 1347788999999999999999999 799999999
Q ss_pred CCcEEEeCCCCcEEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh--CCCCCC
Q 018619 141 PQNLLVDPLTHQVKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFP 215 (353)
Q Consensus 141 p~Nill~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~--g~~pf~ 215 (353)
|+||+++. ++.++|+|||++......... ....++..|++||...+. .++.++|+||+||++|+|++ |..||.
T Consensus 158 p~Nili~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 158 TRNCLVGK-NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG-KFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred hheEEEcC-CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcC-CccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 99999996 788999999999765433211 112335679999987654 48999999999999999998 779998
Q ss_pred CCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 216 GENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..+..+............. ..... ..+..+++.+.+|+.+||+.||.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-----------~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 236 QLSDEQVIENTGEFFRDQG-----------RQVYL----------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ccChHHHHHHHHHHHhhcc-----------ccccC----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 7666554433222110000 00000 011346789999999999999999999999863
No 350
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.5e-40 Score=288.76 Aligned_cols=242 Identities=26% Similarity=0.391 Sum_probs=188.9
Q ss_pred eEeeeeecCCCeEEEEEEEC----CCCcEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 14 MAERVVGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.+.+.||.|+||.||+|... ..+..|+||.+... ...+.+|+..++.++||||+++++++..... .
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~-----~ 76 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP-----L 76 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS-----E
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccc-----c
Confidence 57889999999999999987 44678999999542 2345579999999999999999999863222 7
Q ss_pred EEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++|||||+ |+|.+.+... ....+++..+..++.|++.||+|||+ ++++|+||+++||++++ ++.+||+|||++..
T Consensus 77 ~lv~e~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~-~~iiH~~l~~~nill~~-~~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHS-NNIIHGNLSPSNILLDS-NGQVKLSDFGLSRP 152 (259)
T ss_dssp EEEEE--TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHH-TTEEEST-SGGGEEEET-TTEEEEESTTTGEE
T ss_pred ccccccccccccccccccc--cccccccccccccccccccccccccc-ccccccccccccccccc-cccccccccccccc
Confidence 89999998 6788887752 34679999999999999999999999 79999999999999996 88999999999987
Q ss_pred cccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 164 LIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 164 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
...... .........|+|||.+.+.. ++.++||||||+++||+++ |..||...+..+....+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-------- 223 (259)
T PF07714_consen 153 ISEKSKYKNDSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-------- 223 (259)
T ss_dssp TTTSSSEEESTTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE--------
T ss_pred ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc--------
Confidence 632222 12234577899999986654 8999999999999999999 7899988877766655532100
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..++..++..+.++|.+||+.||.+|||+.++++
T Consensus 224 --------------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 --------------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp --------------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred --------------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1123457899999999999999999999999864
No 351
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=9.2e-40 Score=284.85 Aligned_cols=239 Identities=26% Similarity=0.351 Sum_probs=190.0
Q ss_pred eeeecCCCeEEEEEEECC-CC--cEEEEEEeecccc-----chHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLE-TG--ETVAIKKVLQDRR-----YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|++|.||++.+.. ++ ..||||.+..... .+.+|+.+++.++||||+++++.+.. ..++++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999865 33 3699998875543 44579999999999999999988743 4588999
Q ss_pred cccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||++ ++|.+.+..... ..+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||++......
T Consensus 75 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~di~p~nil~~~-~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLES-KRFIHRDLAARNILLAS-DDKVKIGDFGLMRALPQN 150 (257)
T ss_pred EecCCCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHh-CCccccccCcccEEEec-CCEEEecccccccccccc
Confidence 9997 577776654221 568999999999999999999999 79999999999999996 788999999999866443
Q ss_pred CCc----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 168 EAN----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 168 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
... ....++..|+|||.+.+ ..++.++||||+||++|+|++ |..||...+..+....+.....
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~----------- 218 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGE----------- 218 (257)
T ss_pred ccceecccCCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-----------
Confidence 221 12345678999999854 458999999999999999998 9999988777665554433100
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
....+...+..+.+++.+||+.+|++|||+.++++
T Consensus 219 ----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 219 ----------------RLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ----------------cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 00011346889999999999999999999999874
No 352
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=9.1e-40 Score=284.98 Aligned_cols=235 Identities=28% Similarity=0.386 Sum_probs=185.3
Q ss_pred eeeecCCCeEEEEEEECCCC---cEEEEEEeecccc-----chHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLETG---ETVAIKKVLQDRR-----YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|....++ ..||+|.+..... ...+|+.+++.++|||++++++++. .. ..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~-~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-----GE-PLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----CC-ceEEEE
Confidence 47999999999999876555 7899998865433 3457899999999999999988652 11 367999
Q ss_pred cccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+. ++|.+.+.. ...+++..+..++.|++.||+|||+ ++++|+||||+||+++. ++.+||+|||++......
T Consensus 75 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~nili~~-~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 75 ELAPLGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLES-KHFVHRDLAARNVLLVN-RHQAKISDFGMSRALGAG 148 (257)
T ss_pred EeCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhh-cCeeccCcccceEEEcC-CCcEEeccccccceeecC
Confidence 9998 466666543 4478999999999999999999999 79999999999999996 788999999999865443
Q ss_pred CCcc----eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 168 EANI----SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 168 ~~~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.... ...++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+... .
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-~----------- 215 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYG-KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-E----------- 215 (257)
T ss_pred CcccccccCccccccccCHHHhcCC-CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-C-----------
Confidence 3211 11224579999998554 48999999999999999998 99999887765544333221 0
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
....+..++..+.++|.+||+.||++|||+.+++
T Consensus 216 ----------------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~ 249 (257)
T cd05060 216 ----------------RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELE 249 (257)
T ss_pred ----------------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 0011234788999999999999999999999986
No 353
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8.9e-40 Score=286.92 Aligned_cols=249 Identities=23% Similarity=0.391 Sum_probs=196.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECC-CCcEEEEEEeeccc--------------cchHHHHHHHHH-cCCCceeecceeeee
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQDR--------------RYKNRELQLMRV-MDHPNVISLKHCFFS 75 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~--------------~~~~~E~~~l~~-l~h~~iv~~~~~~~~ 75 (353)
.|.+.+.||+|+||.||++.+.. +++.+|+|.+.... ....+|+.++.. ++||||+++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-- 78 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF-- 78 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE--
Confidence 48889999999999999999987 68899999874221 112357776654 7999999999988
Q ss_pred cCCCCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEE
Q 018619 76 TTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVK 154 (353)
Q Consensus 76 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vk 154 (353)
......+++|||+.+ +|.+.+.........+++..++.++.|++.||.|||+..+++|+||+|+||+++. ++.+|
T Consensus 79 ---~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~-~~~~~ 154 (269)
T cd08528 79 ---LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE-DDKVT 154 (269)
T ss_pred ---ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC-CCcEE
Confidence 334458899999985 6766665544556789999999999999999999995258999999999999996 78899
Q ss_pred EeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 155 ICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 155 l~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
|+|||.+.............++..|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.......+......+.
T Consensus 155 l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 233 (269)
T cd08528 155 ITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNE-PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL 233 (269)
T ss_pred EecccceeecccccccccccCcccCcChhhhcCC-CCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC
Confidence 9999999876554444456678899999999654 489999999999999999999999987765554443332111000
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.....++++.++|.+||+.||++||++.|+..+
T Consensus 234 ---------------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 234 ---------------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ---------------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 012468899999999999999999999998643
No 354
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.1e-39 Score=284.15 Aligned_cols=246 Identities=20% Similarity=0.316 Sum_probs=193.9
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
...+|++.+.||+|+||.||++.+. ++..+|+|.+.... ....+|+.+++.++|||++++++++ ......+
T Consensus 2 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd05112 2 HPSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPIC 75 (256)
T ss_pred ChhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCceE
Confidence 3568999999999999999999874 47789999886542 3456899999999999999999887 3334588
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
++|||+.+ +|.+.+.. ....+++..++.++.|++.|+++||+ ++++|+||||+||+++. ++.+||+|||.+...
T Consensus 76 ~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~ 150 (256)
T cd05112 76 LVFEFMEHGCLSDYLRA---QRGKFSQETLLGMCLDVCEGMAYLES-SNVIHRDLAARNCLVGE-NQVVKVSDFGMTRFV 150 (256)
T ss_pred EEEEcCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccccceEEEcC-CCeEEECCCcceeec
Confidence 99999985 55444432 23568899999999999999999999 79999999999999995 788999999998755
Q ss_pred ccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 165 IAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 165 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... ....++..|+|||.+.+. .++.++|+||+||++|+|++ |..||......+....+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~aPe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----------- 218 (256)
T cd05112 151 LDDQYTSSTGTKFPVKWSSPEVFSFS-KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF----------- 218 (256)
T ss_pred ccCcccccCCCccchhhcCHhHhccC-CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-----------
Confidence 332211 122345679999998654 48899999999999999998 999998777655554432210
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
....+...+..+.+|+.+||+.||.+|||+.+++++
T Consensus 219 -----------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 219 -----------------RLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -----------------CCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 000122357899999999999999999999999753
No 355
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.4e-39 Score=283.73 Aligned_cols=236 Identities=24% Similarity=0.302 Sum_probs=183.5
Q ss_pred eeecCCCeEEEEEEEC--CCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEecc
Q 018619 18 VVGTGSFGIVFQAKCL--ETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEY 90 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 90 (353)
.||+|+||.||++.+. .++..||+|.+.... ....+|+.+++.++||||+++++++ .. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~-----~~-~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC-----EA-EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----cC-CCeEEEEEe
Confidence 4899999999998765 345679999885442 2345799999999999999998876 21 237899999
Q ss_pred ccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCC
Q 018619 91 VPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA 169 (353)
Q Consensus 91 ~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~ 169 (353)
+++ +|.+.+.. ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||++........
T Consensus 76 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~~~~~~~ 150 (257)
T cd05115 76 ASGGPLNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEG-KNFVHRDLAARNVLLVN-QHYAKISDFGLSKALGADDS 150 (257)
T ss_pred CCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-cCeeecccchheEEEcC-CCcEEeccCCccccccCCcc
Confidence 985 66555542 34578999999999999999999999 79999999999999996 78899999999975543322
Q ss_pred cc----eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcC
Q 018619 170 NI----SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 244 (353)
Q Consensus 170 ~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
.. ...++..|+|||.+.+ ..++.++|||||||++|+|++ |..||......+....+.+. ..
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~------------ 216 (257)
T cd05115 151 YYKARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG-KR------------ 216 (257)
T ss_pred ceeccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-CC------------
Confidence 11 1122567999999855 448899999999999999996 99999887766544333221 00
Q ss_pred CCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 245 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
..++...++++.++|.+||+.||++||+..++.+
T Consensus 217 ---------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 217 ---------------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred ---------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0122346899999999999999999999998853
No 356
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.8e-40 Score=289.65 Aligned_cols=236 Identities=17% Similarity=0.213 Sum_probs=181.1
Q ss_pred eeeecCCCeEEEEEEECCCCc-------EEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 17 RVVGTGSFGIVFQAKCLETGE-------TVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~-------~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+.||+|+||.||++.+..++. .+|+|.+.... ....+|..+++.++|||++++++.+... ...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CCcE
Confidence 468999999999999865544 48888775433 2345788999999999999999988543 2377
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCC-------cEEEee
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH-------QVKICD 157 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~-------~vkl~D 157 (353)
+||||+++ +|...+.. ....+++..+..++.|++.||+|||+ +||+||||||+||+++.++. .++++|
T Consensus 76 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 76 MVQEYVKFGSLDTYLKK---NKNLINISWKLEVAKQLAWALHFLED-KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred EEEecCCCCcHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEecccccccCCCceEEecc
Confidence 99999985 55555543 23468999999999999999999999 79999999999999986332 279999
Q ss_pred eccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHhCCCCHH
Q 018619 158 FGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTRE 236 (353)
Q Consensus 158 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
||.+...... ....++..|+|||++.+...++.++||||+||++|+|++|. .||...+....... ...
T Consensus 152 ~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~------- 220 (258)
T cd05078 152 PGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YED------- 220 (258)
T ss_pred cccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHc-------
Confidence 9998754322 23456788999999976556899999999999999999984 67665554433221 110
Q ss_pred HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 237 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
...++...+.++.+||.+||+.||++|||++++++.
T Consensus 221 ----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 221 ----------------------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ----------------------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 001223456789999999999999999999999853
No 357
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.3e-39 Score=287.56 Aligned_cols=246 Identities=27% Similarity=0.365 Sum_probs=194.6
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCc----EEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
++...+|++.+.||+|+||.||+|.++.+|+ .+|+|...... ....+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 80 (279)
T cd05057 3 ILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-- 80 (279)
T ss_pred ccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--
Confidence 3557899999999999999999999877665 58999876543 234579999999999999999998743
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
...++||||+. ++|.+.+.. ....+++..+..++.|++.||+|||+ +|++|+||||+||+++. ++.+||+
T Consensus 81 ----~~~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~-~~i~H~di~p~nil~~~-~~~~kL~ 151 (279)
T cd05057 81 ----SQVQLITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKGMSYLEE-KRLVHRDLAARNVLVKT-PQHVKIT 151 (279)
T ss_pred ----CceEEEEecCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEecccCcceEEEcC-CCeEEEC
Confidence 23789999998 566666543 34568999999999999999999999 89999999999999986 7889999
Q ss_pred eeccccccccCCCcce---eeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 018619 157 DFGSAKQLIAGEANIS---YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 157 Dfg~a~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|||++........... ..++..|+|||.+.. ..++.++|+||+||++|++++ |..||.+.+..+....+... ..
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~ 229 (279)
T cd05057 152 DFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ER 229 (279)
T ss_pred CCcccccccCcccceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CC
Confidence 9999986543332211 122567999998854 458899999999999999998 99999887765544433321 00
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
. ..+...+.++.+++.+||..||.+|||+.+++
T Consensus 230 ~---------------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~ 262 (279)
T cd05057 230 L---------------------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELI 262 (279)
T ss_pred C---------------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 0 01123678899999999999999999999885
No 358
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-41 Score=309.44 Aligned_cols=206 Identities=27% Similarity=0.402 Sum_probs=171.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCC-CCceeE
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTS-KNELFL 84 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~~~ 84 (353)
..|...+.||+||||.||+++++.+|+.||||.+.+. ...--+|+++|++++|||||+++++=-.... --....
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 4567888999999999999999999999999988653 2333489999999999999999765311110 002235
Q ss_pred EEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCC---CCcEEEeeecc
Q 018619 85 NLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPL---THQVKICDFGS 160 (353)
Q Consensus 85 ~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~---~~~vkl~Dfg~ 160 (353)
.++||||. |+|...+.. .+....+++.++..++..+..||.|||+ +||+||||||.||++... ...-||+|||.
T Consensus 93 vlvmEyC~gGsL~~~L~~-PEN~~GLpE~e~l~lL~d~~~al~~LrE-n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNS-PENAYGLPESEFLDLLSDLVSALRHLRE-NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred eEEEeecCCCcHHHHhcC-cccccCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 59999999 467666654 3445679999999999999999999999 899999999999998421 33689999999
Q ss_pred ccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 018619 161 AKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 218 (353)
Q Consensus 161 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~ 218 (353)
|+..+++....+.+||+.|.+||++.....|+..+|.||+||++|+++||..||....
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 9999999988999999999999999655679999999999999999999999996543
No 359
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.6e-39 Score=284.18 Aligned_cols=246 Identities=28% Similarity=0.384 Sum_probs=193.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCC---CcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLET---GETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
+..++|.+.+.||+|+||.||+|.+... ...||||...... ....+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---- 78 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---- 78 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC----
Confidence 3467899999999999999999987544 3568999875432 234579999999999999999987632
Q ss_pred CceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
. ..|+||||++ ++|.+.+.. ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+||
T Consensus 79 -~-~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~~H~dl~p~nili~~-~~~~~l~d~ 151 (270)
T cd05056 79 -N-PVWIVMELAPLGELRSYLQV---NKYSLDLASLILYSYQLSTALAYLES-KRFVHRDIAARNVLVSS-PDCVKLGDF 151 (270)
T ss_pred -C-CcEEEEEcCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccChheEEEec-CCCeEEccC
Confidence 1 2579999998 466666643 23468999999999999999999999 79999999999999996 788999999
Q ss_pred ccccccccCCCcc--eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 159 GSAKQLIAGEANI--SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 159 g~a~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
|++.......... ...++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+..+....+.+...
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~---- 226 (270)
T cd05056 152 GLSRYLEDESYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGER---- 226 (270)
T ss_pred ceeeecccccceecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCc----
Confidence 9987654432211 1223467999998854 458999999999999999986 9999988776655544322100
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+..++.++.++|.+||..+|++|||+.+++.
T Consensus 227 ------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 227 ------------------------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred ------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0122357889999999999999999999999864
No 360
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.3e-39 Score=283.56 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=193.8
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
|.+...+|++.+.||+|+||.||.+. .+++.||+|.+..+. ....+|+.+++.++|||++++.+++.. . .
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~-~ 72 (254)
T cd05083 1 WLLNLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH-----N-G 72 (254)
T ss_pred CcccHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcC-----C-C
Confidence 34566889999999999999999886 478899999886442 345689999999999999999887732 1 2
Q ss_pred EEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|||+. ++|.+.+... ....+++..+..++.|++.||.|||+ +|++||||||+||+++. ++.+||+|||++.
T Consensus 73 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~H~dl~p~nili~~-~~~~kl~Dfg~~~ 148 (254)
T cd05083 73 LYIVMELMSKGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLES-KKLVHRDLAARNILVSE-DGVAKVSDFGLAR 148 (254)
T ss_pred cEEEEECCCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcC-CCcEEECCCccce
Confidence 679999998 5777776542 23468899999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 163 QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
...... .....+..|+|||.+.+. .++.++|+||+||++|+|++ |..||...+..+....+.+...
T Consensus 149 ~~~~~~--~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---------- 215 (254)
T cd05083 149 VGSMGV--DNSKLPVKWTAPEALKHK-KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR---------- 215 (254)
T ss_pred eccccC--CCCCCCceecCHHHhccC-CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC----------
Confidence 543221 122335679999988544 58899999999999999997 9999988776554433322100
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+..++..+.+++++||+.+|.+||++++++.
T Consensus 216 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 216 ------------------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred ------------------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0012347889999999999999999999999863
No 361
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2e-39 Score=286.34 Aligned_cols=247 Identities=21% Similarity=0.321 Sum_probs=190.7
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCc----EEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
++..++|++.+.||+|+||.||++....+++ .+++|.+.... .....|+..+..++||||+++++++.
T Consensus 3 ~~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~--- 79 (279)
T cd05111 3 ILKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP--- 79 (279)
T ss_pred cCCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC---
Confidence 4566889999999999999999999887776 47777764321 22345677888899999999998762
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
+. ..++++||+. |+|.+.+.. ....+++..+..++.|++.||+|||+ ++++||||||+||+++. ++.+||+
T Consensus 80 --~~-~~~~i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~nili~~-~~~~kl~ 151 (279)
T cd05111 80 --GA-SLQLVTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLEE-HRMVHRNLAARNILLKS-DSIVQIA 151 (279)
T ss_pred --CC-ccEEEEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcC-CCcEEEc
Confidence 11 2568899988 677666653 34578999999999999999999999 79999999999999996 7889999
Q ss_pred eeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 018619 157 DFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 157 Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|||+++........ ....++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+....... .++.....
T Consensus 152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-~~~~~~~~ 229 (279)
T cd05111 152 DFGVADLLYPDDKKYFYSEHKTPIKWMALESILFG-RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVP-DLLEKGER 229 (279)
T ss_pred CCccceeccCCCcccccCCCCCcccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHHCCCc
Confidence 99999865433221 223456789999998654 48999999999999999998 99999877654432 22221000
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
+. .+...+.++.+++.+||..||++|||+.++++
T Consensus 230 ~~---------------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 230 LA---------------------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CC---------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00 01235678899999999999999999999875
No 362
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.4e-39 Score=284.69 Aligned_cols=236 Identities=16% Similarity=0.199 Sum_probs=177.5
Q ss_pred eeeecCCCeEEEEEEECC------------CCcEEEEEEeecccc----chHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 17 RVVGTGSFGIVFQAKCLE------------TGETVAIKKVLQDRR----YKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~------------~~~~vaiK~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
+.||+|+||.||+++... ....+++|.+..... ...+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 468999999999998432 223588887754322 33467889999999999999998743
Q ss_pred ceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCC-------cE
Q 018619 81 ELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH-------QV 153 (353)
Q Consensus 81 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~-------~v 153 (353)
....+++|||++++.+..+.. .....+++..++.++.|++.||+|||+ ++|+||||||+|||++. ++ .+
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~-~~~~~~~~~~~ 151 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMH--RKSDVLTTPWKFKVAKQLASALSYLED-KDLVHGNVCTKNILLAR-EGIDGECGPFI 151 (262)
T ss_pred CCCCEEEEecccCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHhhh-CCeECCCCCcccEEEec-CCccCCCCcee
Confidence 233679999999653333322 234568999999999999999999999 79999999999999975 33 38
Q ss_pred EEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCC
Q 018619 154 KICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 154 kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
+++|||++...... ....++..|+|||.+.....++.++||||+||++|+|+ +|..||......+.. .....
T Consensus 152 ~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~--- 224 (262)
T cd05077 152 KLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEG--- 224 (262)
T ss_pred EeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhc---
Confidence 99999998754322 23456788999999865566899999999999999997 588888765533221 11110
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
... .....+.++.+||.+||+.||.+||+..+++++
T Consensus 225 --------------~~~------------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 225 --------------QCM------------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred --------------Ccc------------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 000 011246789999999999999999999999865
No 363
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.3e-39 Score=284.31 Aligned_cols=246 Identities=21% Similarity=0.298 Sum_probs=183.2
Q ss_pred eeeecCCCeEEEEEEECC--CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 17 RVVGTGSFGIVFQAKCLE--TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.||+|+||.||++.... ....+++|.+.... ....+|+.+++.++||||+++++.+. ....+|+|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-----ESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-----CCCceEEEEE
Confidence 368999999999996432 34578888775332 23457899999999999999999873 3344889999
Q ss_pred ccc-chHHHHHHhhhh-cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 90 YVP-ESMYRVLKHYSS-ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 90 ~~~-~~l~~~l~~~~~-~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
|++ ++|.+.+..... .....++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++......
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~~~~~~ 153 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-ADFIHSDLALRNCQLTA-DLSVKIGDYGLALEQYPE 153 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh-cCEecccccHhheEecC-CCcEEEeccccccccccc
Confidence 998 477766654322 12345678889999999999999999 79999999999999996 788999999998754332
Q ss_pred CC---cceeeeeceeeChhhhhC------CCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 168 EA---NISYICSRFYRAPELIFG------ATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 168 ~~---~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
.. .....++..|+|||++.. ...++.++||||+||++|+|++ |..||......+.+..........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~---- 229 (269)
T cd05042 154 DYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIK---- 229 (269)
T ss_pred hheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCcc----
Confidence 21 122334667999999743 2346789999999999999998 789998877666555444321110
Q ss_pred HhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 238 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.+ ...+...++....+++..|+ .||++|||++++++
T Consensus 230 ------------~~-------~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 230 ------------LP-------KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ------------CC-------CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 00 01123457888999999998 59999999999864
No 364
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.8e-39 Score=282.89 Aligned_cols=242 Identities=28% Similarity=0.403 Sum_probs=192.9
Q ss_pred eEeeeeecCCCeEEEEEEECCCC----cEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 14 MAERVVGTGSFGIVFQAKCLETG----ETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.+.+.||+|+||.||++.+..++ ..||+|.+.... ....+|+.+++.++|+||+++++.+.. ....
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 76 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-----EEPL 76 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-----CCee
Confidence 57789999999999999998766 899999986543 244579999999999999999998843 3458
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+++|||+++ +|.+.+... ....+++..+..++.|++.||++||+ +|++|+||||+||+++. ++.++|+|||++..
T Consensus 77 ~~i~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lh~-~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~ 152 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKN--RPKELSLSDLLSFALQIARGMEYLES-KNFIHRDLAARNCLVGE-NLVVKISDFGLSRD 152 (258)
T ss_pred EEEEeccCCCCHHHHHHhh--hhccCCHHHHHHHHHHHHHHHHHHhc-CCeeecccccceEEEcc-CCeEEEcccCCcee
Confidence 899999985 666665531 11228999999999999999999999 79999999999999996 77899999999986
Q ss_pred cccCCCcce--eeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 164 LIAGEANIS--YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 164 ~~~~~~~~~--~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
......... ..+++.|+|||.+.+ ..++.++|+||+||++|+|++ |.+||...+..+....+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------- 222 (258)
T smart00219 153 LYDDDYYKKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR--------- 222 (258)
T ss_pred cccccccccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---------
Confidence 654422211 235678999999844 458999999999999999998 8899988766555544332100
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+...+.++.+++.+||..||++|||+.++++
T Consensus 223 -------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 223 -------------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred -------------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 0112347889999999999999999999999875
No 365
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.3e-39 Score=280.22 Aligned_cols=237 Identities=25% Similarity=0.377 Sum_probs=185.0
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
+.||+|+||.||++.. .++..||+|.+.... ....+|+.+++.++||||+++++.+. .....++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECC
Confidence 4789999999999985 468899999875432 23457999999999999999999873 333488999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN 170 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~ 170 (353)
++ +|.+.+.. ....+++..+..++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||++.........
T Consensus 75 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~~~~~~~~ 149 (250)
T cd05085 75 PGGDFLSFLRK---KKDELKTKQLVKFALDAAAGMAYLES-KNCIHRDLAARNCLVGE-NNVLKISDFGMSRQEDDGIYS 149 (250)
T ss_pred CCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccChheEEEcC-CCeEEECCCccceeccccccc
Confidence 84 55555432 23568899999999999999999999 79999999999999996 788999999998754332211
Q ss_pred c--eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 171 I--SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 171 ~--~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
. ...++..|+|||.+.+ ..++.++|+||+|+++|+|++ |..||...........+....
T Consensus 150 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------- 211 (250)
T cd05085 150 SSGLKQIPIKWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY----------------- 211 (250)
T ss_pred cCCCCCCcccccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-----------------
Confidence 1 1233567999999855 448899999999999999998 999998776654443332210
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...++..++.++.+++.+||+.||++|||+.++++
T Consensus 212 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 212 -----------RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred -----------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 00112347899999999999999999999999864
No 366
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.3e-39 Score=281.33 Aligned_cols=237 Identities=25% Similarity=0.368 Sum_probs=186.3
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
+.||+|++|.||++.+.. ++.||+|.+.... ....+|+.+++.++|+||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcC
Confidence 478999999999999877 9999999876432 23457999999999999999998873 334488999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCc
Q 018619 92 PE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN 170 (353)
Q Consensus 92 ~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~ 170 (353)
.+ +|.+.+.. ....+++..+..++.|++.||+|||+ ++++||||||+||+++. ++.+||+|||.+.........
T Consensus 75 ~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~di~p~nili~~-~~~~~l~d~g~~~~~~~~~~~ 149 (251)
T cd05041 75 PGGSLLTFLRK---KKNRLTVKKLLQMSLDAAAGMEYLES-KNCIHRDLAARNCLVGE-NNVLKISDFGMSREEEGGIYT 149 (251)
T ss_pred CCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCEehhhcCcceEEEcC-CCcEEEeeccccccccCCcce
Confidence 75 55555533 34568899999999999999999999 79999999999999996 788999999998755422211
Q ss_pred ---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 171 ---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 171 ---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.....+..|+|||.+.+. .++.++|+||+||++|+|++ |..||...........+.....
T Consensus 150 ~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~--------------- 213 (251)
T cd05041 150 VSDGLKQIPIKWTAPEALNYG-RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYR--------------- 213 (251)
T ss_pred eccccCcceeccCChHhhccC-CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCC---------------
Confidence 112235669999998654 58999999999999999998 8899987765544433221100
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+..++.++.+++.+||+.+|.+|||+.++++
T Consensus 214 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 214 -------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred -------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 0012346889999999999999999999999874
No 367
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=293.66 Aligned_cols=260 Identities=24% Similarity=0.395 Sum_probs=205.0
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----------cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----------RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
.++|-++..||+|+|+.||+|.+...++.||+|+-.-.. +-.-+|.+|.+.|+||.||++|++|.-.
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD-- 539 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD-- 539 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec--
Confidence 578999999999999999999999999999999653211 1223799999999999999999988432
Q ss_pred CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC-CCeeeccCCCCcEEEeCC--CCcEEE
Q 018619 79 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTV-PRVCHRDLKPQNLLVDPL--THQVKI 155 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~-~~i~H~Dlkp~Nill~~~--~~~vkl 155 (353)
...+|-|+|||+|+ .|..|.+.+..+++.+++.|+.||+.||.||.+. ..|||-||||.|||+... .|.+||
T Consensus 540 --tdsFCTVLEYceGN---DLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 540 --TDSFCTVLEYCEGN---DLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred --cccceeeeeecCCC---chhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEe
Confidence 22388999999986 4444556788899999999999999999999983 369999999999999532 367999
Q ss_pred eeeccccccccCCCc--------ceeeeeceeeChhhhhC---CCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHH
Q 018619 156 CDFGSAKQLIAGEAN--------ISYICSRFYRAPELIFG---ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLV 224 (353)
Q Consensus 156 ~Dfg~a~~~~~~~~~--------~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 224 (353)
+|||+++.+.+.... ....||.||++||.+.- .+..+.++||||+|||+|.++.|+.||..+.....+.
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdIL 694 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDIL 694 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHH
Confidence 999999987654332 34678999999998743 2457889999999999999999999997765443322
Q ss_pred HHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 225 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
+.-..+ .-.+..||.- ..+++++++||++||++--++|..+.++-.||||.-
T Consensus 695 qeNTIl-------------kAtEVqFP~K----------PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 695 QENTIL-------------KATEVQFPPK----------PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhhchh-------------cceeccCCCC----------CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 111100 1122233321 248999999999999999999999999999999964
No 368
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.8e-39 Score=282.33 Aligned_cols=245 Identities=20% Similarity=0.234 Sum_probs=182.4
Q ss_pred eeeecCCCeEEEEEEEC--CCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 17 RVVGTGSFGIVFQAKCL--ETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.||+|+||.||++... .++..+|+|.+.... ....+|+.+++.++||||+++++.+. ....+++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-----EVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----CCCCcEEEEE
Confidence 46899999999999754 356789999885432 23457999999999999999998873 3334789999
Q ss_pred ccc-chHHHHHHhhhh-cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 90 YVP-ESMYRVLKHYSS-ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 90 ~~~-~~l~~~l~~~~~-~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
|++ ++|.+.+..... .....++..++.++.|++.||+|||+ ++++|+||||+||+++. ++.+||+|||++......
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dlkp~nil~~~-~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-NNFIHSDLALRNCLLTA-DLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcC-CCcEEECCccccccccCc
Confidence 998 567666654322 22356777888999999999999999 79999999999999996 788999999998754332
Q ss_pred CC---cceeeeeceeeChhhhhCCC------CCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 168 EA---NISYICSRFYRAPELIFGAT------EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 168 ~~---~~~~~~t~~y~aPE~~~~~~------~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
.. .....++..|+|||++.+.. .++.++|+||+||++|+|++ |..||...+..+...........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----- 228 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQL----- 228 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccC-----
Confidence 21 11234577899999985321 35789999999999999996 99999877665544332221000
Q ss_pred HhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 238 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
..+ ...+....++.+.+++++|+ .||++|||+++++
T Consensus 229 -----------~~~-------~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~ 264 (269)
T cd05087 229 -----------KLP-------KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVH 264 (269)
T ss_pred -----------CCC-------CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHH
Confidence 000 01112246788999999999 6899999999986
No 369
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2e-39 Score=289.66 Aligned_cols=248 Identities=25% Similarity=0.355 Sum_probs=192.9
Q ss_pred eeecceeeEeeeeecCCCeEEEEEEECCCCc----EEEEEEeecccc-----chHHHHHHHHHcCCCceeecceeeeecC
Q 018619 7 ILQTISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDRR-----YKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
++..++|+..+.||+|+||.||++.+..+++ .||+|.+..... ...+|+.+++.++||||+++++.+...
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 3 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred ccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 4667889999999999999999999887776 468887764422 345789999999999999999877321
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
..++++||++ |++.+.+.. ....+++..+..++.|++.||+|||+ +||+|+||||+||+++. ++.+||+
T Consensus 82 -----~~~~v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dikp~Nill~~-~~~~kL~ 151 (303)
T cd05110 82 -----TIQLVTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKS-PNHVKIT 151 (303)
T ss_pred -----CceeeehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHhh-cCeeccccccceeeecC-CCceEEc
Confidence 1458999998 566666543 23468899999999999999999999 79999999999999985 7789999
Q ss_pred eeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 018619 157 DFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 157 Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|||++......... ....++..|+|||.+.+. .++.++||||+||++|+|++ |..||.+....+.. ........
T Consensus 152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~ 229 (303)
T cd05110 152 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR-KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-DLLEKGER 229 (303)
T ss_pred cccccccccCcccccccCCCccccccCCHHHhccC-CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHCCCC
Confidence 99999865433221 123346789999998654 48999999999999999997 99999776544332 22221000
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+ + .+...+.++.+++.+||..||++||++.++++.
T Consensus 230 ~-----------------~----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 230 L-----------------P----------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred C-----------------C----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 0 112357789999999999999999999998763
No 370
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.4e-39 Score=285.58 Aligned_cols=259 Identities=26% Similarity=0.384 Sum_probs=189.8
Q ss_pred ecceeeEeeeeecCCCeEEEEEEE----CCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKC----LETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
+..-|.+.+.||+|+||.||+|+. ..+++.||+|.+.... ....+|+.+++.++|||++++.+++...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 78 (284)
T cd05079 2 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED--- 78 (284)
T ss_pred chhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---
Confidence 345678999999999999999974 4578899999885332 3456899999999999999998877432
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
+....++||||++| +|.+.+.. ....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.++|+||
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~~i~~aL~~lH~-~gi~H~dlkp~Nil~~~-~~~~~l~df 153 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPR---NKNKINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVES-EHQVKIGDF 153 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecccchheEEEcC-CCCEEECCC
Confidence 22347899999974 66555543 23468999999999999999999999 89999999999999996 788999999
Q ss_pred ccccccccCCCc----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 159 GSAKQLIAGEAN----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 159 g~a~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
|++......... ....++..|+|||.+.+. .++.++||||+||++|+|+++..|+..... .. .+..+...
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~---~~~~~~~~ 227 (284)
T cd05079 154 GLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQS-KFYIASDVWSFGVTLYELLTYCDSESSPMT--LF---LKMIGPTH 227 (284)
T ss_pred ccccccccCccceeecCCCCCCccccCHHHhccC-CCCccccchhhhhhhhhhhcCCCCCccccc--hh---hhhccccc
Confidence 999865443221 123456679999998654 588999999999999999998776533211 00 11111000
Q ss_pred ----HH-HHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 235 ----RE-EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 235 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.. .+..... ......+..++.++.+|+.+||+.||.+|||+.+++++
T Consensus 228 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 228 GQMTVTRLVRVLEE-------------GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ccccHHHHHHHHHc-------------CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 00 0000000 00011224578999999999999999999999999753
No 371
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=304.61 Aligned_cols=261 Identities=28% Similarity=0.418 Sum_probs=216.0
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHc-CCCceeecceeeeecCCCCceeE
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
-.+.+++.+++|.|.+|.||+++++.+++..|+|+...+. ..++.|.++++.. .|||++.++++|+-........+
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 3567899999999999999999999999999999886443 3455678888887 59999999999987666666779
Q ss_pred EEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|+|||||+ |+..++++... +.++.|+.+..|++.++.||.+||. +.++|||||-.|||++. ++.|||+|||.+..
T Consensus 97 WLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~-nkviHRDikG~NiLLT~-e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHN-NKVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ 172 (953)
T ss_pred EEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhh-cceeeecccCceEEEec-cCcEEEeeeeeeee
Confidence 99999999 46666666654 8899999999999999999999999 89999999999999996 78899999999887
Q ss_pred cccCC-CcceeeeeceeeChhhhhCCC----CCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 164 LIAGE-ANISYICSRFYRAPELIFGAT----EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 164 ~~~~~-~~~~~~~t~~y~aPE~~~~~~----~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
..... ...+.+|||.|||||++...+ .|+..+|+||||++..||.-|.+|+.+..+...+..|-. -|+...
T Consensus 173 ldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR---NPPPkL- 248 (953)
T KOG0587|consen 173 LDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NPPPKL- 248 (953)
T ss_pred eecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC---CCCccc-
Confidence 65443 345678999999999985533 367799999999999999999999988776655433322 111110
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
. =+++.+.++.|||..||.+|-.+||+..++|.|||++.
T Consensus 249 -----------------k-----rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 249 -----------------K-----RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred -----------------c-----chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 0 12346889999999999999999999999999999974
No 372
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2e-39 Score=285.46 Aligned_cols=235 Identities=18% Similarity=0.216 Sum_probs=178.2
Q ss_pred eeecCCCeEEEEEEECCC------------------------CcEEEEEEeeccc----cchHHHHHHHHHcCCCceeec
Q 018619 18 VVGTGSFGIVFQAKCLET------------------------GETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISL 69 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~~~------------------------~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~ 69 (353)
.||+|+||.||++....+ ...|++|.+.... ....+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 689999999999874321 2358888875432 234468889999999999999
Q ss_pred ceeeeecCCCCceeEEEEeccccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC
Q 018619 70 KHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP 148 (353)
Q Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~ 148 (353)
++++... ...++||||++++ |...+. ...+.+++..+..++.|++.||+|||+ +||+||||||+||+++.
T Consensus 82 ~~~~~~~-----~~~~lv~ey~~~g~L~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~Nill~~ 152 (274)
T cd05076 82 HGVCVRG-----SENIMVEEFVEHGPLDVCLR---KEKGRVPVAWKITVAQQLASALSYLED-KNLVHGNVCAKNILLAR 152 (274)
T ss_pred EEEEEeC-----CceEEEEecCCCCcHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcccEEEec
Confidence 9988433 3478999999965 433332 234678999999999999999999999 79999999999999974
Q ss_pred C------CCcEEEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHH-hCCCCCCCCChHH
Q 018619 149 L------THQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 221 (353)
Q Consensus 149 ~------~~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~-~g~~pf~~~~~~~ 221 (353)
. ...+|++|||++...... ....++..|+|||.+.+...++.++|+|||||++|+|+ +|..||......+
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 2 224899999988644322 22356778999998866556899999999999999985 7999998765543
Q ss_pred HHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 222 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
........ ..++...++++.++|.+||+.||++|||+.+++++
T Consensus 230 ~~~~~~~~------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 230 KERFYEKK------------------------------HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHHhc------------------------------cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 32211110 00112346789999999999999999999999864
No 373
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3e-39 Score=283.54 Aligned_cols=241 Identities=24% Similarity=0.350 Sum_probs=186.7
Q ss_pred eeeecCCCeEEEEEEECCCC------cEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 17 RVVGTGSFGIVFQAKCLETG------ETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+.||+|+||.||++++.... +.+|+|.+.+.. ....+|+.+++.++||||+++++++.. ....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-----NEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-----CCCeE
Confidence 46899999999999976544 689999875432 234579999999999999999988733 33488
Q ss_pred EEecccc-chHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCC-----cEEEe
Q 018619 86 LVMEYVP-ESMYRVLKHYSS---ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH-----QVKIC 156 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~---~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~-----~vkl~ 156 (353)
++|||++ ++|.+.+..... ....+++..+..++.|++.||+|||+ ++++|+||||+||+++. ++ .++|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~-~~~~~~~~~~l~ 153 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ-MHFIHRDLAARNCLVSE-KGYDADRVVKIG 153 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh-CCcccCCCChheEEEec-CCCCCCcceEEC
Confidence 9999998 577777654322 23457889999999999999999999 79999999999999986 44 79999
Q ss_pred eeccccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 018619 157 DFGSAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 157 Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
|||++........ .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+... ..
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~ 231 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDG-KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-GR 231 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccC-CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-Cc
Confidence 9999875533221 1122346789999998654 48999999999999999998 99999877765544332210 00
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+..++..+.++|.+||+.+|.+||+++++++
T Consensus 232 ---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 232 ---------------------------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ---------------------------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0112347889999999999999999999999864
No 374
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=296.11 Aligned_cols=249 Identities=26% Similarity=0.349 Sum_probs=198.9
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCc---E-EEEEEeeccc-------cchHHHHHHHHHcCCCceeecceeee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGE---T-VAIKKVLQDR-------RYKNRELQLMRVMDHPNVISLKHCFF 74 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~-vaiK~~~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~ 74 (353)
|.+..++-.+.+.||+|+||.||+++.+..+. . ||+|...... ..+.+|+++++.++|||||+++++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa- 230 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA- 230 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-
Confidence 66777788888999999999999999765432 3 8999886421 2344799999999999999999988
Q ss_pred ecCCCCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcE
Q 018619 75 STTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQV 153 (353)
Q Consensus 75 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~v 153 (353)
.....+++|||+|.| +|.+.|.. ....++..+...++.+.+.||+|||+ ++++||||-..|+|++. ++.+
T Consensus 231 ----~~~~Pl~ivmEl~~gGsL~~~L~k---~~~~v~~~ek~~~~~~AA~Gl~YLh~-k~~IHRDIAARNcL~~~-~~~v 301 (474)
T KOG0194|consen 231 ----VLEEPLMLVMELCNGGSLDDYLKK---NKKSLPTLEKLRFCYDAARGLEYLHS-KNCIHRDIAARNCLYSK-KGVV 301 (474)
T ss_pred ----cCCCccEEEEEecCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHhHHHHHHH-CCCcchhHhHHHheecC-CCeE
Confidence 344448999999995 66666654 23369999999999999999999999 79999999999999996 6778
Q ss_pred EEeeeccccccccCCCcc-eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 018619 154 KICDFGSAKQLIAGEANI-SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLG 231 (353)
Q Consensus 154 kl~Dfg~a~~~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~ 231 (353)
||+|||+++......... ...-...|+|||.+... .|+.++||||+||++||+++ |..||.+....+...++...
T Consensus 302 KISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~-- 378 (474)
T KOG0194|consen 302 KISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN-- 378 (474)
T ss_pred EeCccccccCCcceeeccccccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc--
Confidence 999999987543111111 11224679999999654 69999999999999999998 88899999988887777442
Q ss_pred CCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 232 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.+ ...++...+.++..++.+|+..||++|+|..++.
T Consensus 379 ---------------~~----------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~ 414 (474)
T KOG0194|consen 379 ---------------GY----------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIK 414 (474)
T ss_pred ---------------Cc----------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHH
Confidence 11 1112345788999999999999999999998875
No 375
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=290.70 Aligned_cols=260 Identities=25% Similarity=0.345 Sum_probs=190.4
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+++|.-...||+|+||.||++.- ..|..||||++.... ..+.+|+.++..++|||+|+++++|.+... ..+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~----~~~ 148 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE----HRL 148 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc----eEE
Confidence 46777788999999999999985 455899999886433 347799999999999999999999854332 367
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCC--CeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVP--RVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~--~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|+||+. |+|.+.+...... .++|.....|+.+++.||+|||+.. .|+||||||+|||+|+ +.+.||+|||+|+
T Consensus 149 LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~-~~~aKlsDFGLa~ 225 (361)
T KOG1187|consen 149 LVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE-DFNAKLSDFGLAK 225 (361)
T ss_pred EEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC-CCCEEccCccCcc
Confidence 9999999 6777777642211 8899999999999999999999943 3999999999999995 8999999999997
Q ss_pred cccc-CCCccee-eeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCCHHH
Q 018619 163 QLIA-GEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---AVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 163 ~~~~-~~~~~~~-~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~ 237 (353)
.... ....... .||..|++||.+.. ...+.++||||||++|.|+++|+.+..... ......-....+....
T Consensus 226 ~~~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~--- 301 (361)
T KOG1187|consen 226 LGPEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGK--- 301 (361)
T ss_pred cCCccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcc---
Confidence 6544 3333333 78999999999855 458999999999999999999998876432 1111111111111111
Q ss_pred HhhcCcCCCCCcCCCCCCCccccccCC-CCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 238 IRCMNPNYTDFRFPQIKAHPWHKVFHK-RMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
..++--+.+.... +.. ..-..+..+..+|++.+|.+||+..|++
T Consensus 302 -------~~eiiD~~l~~~~----~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 302 -------LREIVDPRLKEGE----YPDEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred -------hhheeCCCccCCC----CChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 1111111111000 000 0122366788999999999999999874
No 376
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.5e-39 Score=280.32 Aligned_cols=239 Identities=24% Similarity=0.381 Sum_probs=180.8
Q ss_pred eeeecCCCeEEEEEEECC---CCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 17 RVVGTGSFGIVFQAKCLE---TGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
+.||+|+||.||+|.+.. .+..||||.+.... ....+|+.+++.++||||+++++.+... +...+++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----EGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC----CCCcEEEE
Confidence 468999999999998653 34579999875321 2345788999999999999998865322 22367999
Q ss_pred cccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 89 EYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 89 e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
||+. ++|.+.+.. .....++..+..++.|++.||+|||+ .+++||||||+||+++. ++.+||+|||++......
T Consensus 77 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlk~~nili~~-~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 77 PYMKHGDLRNFIRS---ETHNPTVKDLIGFGLQVAKGMEYLAS-KKFVHRDLAARNCMLDE-SFTVKVADFGLARDIYDK 151 (262)
T ss_pred ecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcC-CCcEEECCccccccccCC
Confidence 9998 566666543 23456777888899999999999999 79999999999999996 788999999999754332
Q ss_pred CC-----cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhc
Q 018619 168 EA-----NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 241 (353)
Q Consensus 168 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
.. .....++..|+|||.+.+. .++.++|||||||++|+|++ |.+||...+..+....+... .+
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~--~~-------- 220 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG--RR-------- 220 (262)
T ss_pred cceeecccccCcCCccccChhHhccC-ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC--CC--------
Confidence 11 1123346789999998654 58999999999999999999 56778776655444332211 00
Q ss_pred CcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 242 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+..++..+.+++.+||+.||++||++.++++
T Consensus 221 ------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 221 ------------------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred ------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0011246789999999999999999999999874
No 377
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.6e-39 Score=281.59 Aligned_cols=250 Identities=22% Similarity=0.323 Sum_probs=190.5
Q ss_pred eeEeeeeecCCCeEEEEEEEC---CCCcEEEEEEeeccc------cchHHHHHHHHHcCCCceeecceeeeecCCCCc-e
Q 018619 13 YMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNE-L 82 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~-~ 82 (353)
|.+.+.||+|+||.||+|... .+++.||||.+..+. ....+|+.+++.++||||+++++++......+. .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 678899999999999999854 457899999886532 234579999999999999999998755433222 2
Q ss_pred eEEEEecccc-chHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYS--SANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~--~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
..++++||+. +++...+.... .....++...++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~nili~~-~~~~kl~dfg 158 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS-KNFIHRDLAARNCMLNE-NMTVCVADFG 158 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccchhhEEEcC-CCCEEECccc
Confidence 3568889998 45555443211 122357899999999999999999999 89999999999999986 7889999999
Q ss_pred cccccccCCC---cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCH
Q 018619 160 SAKQLIAGEA---NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 235 (353)
Q Consensus 160 ~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 235 (353)
++........ .....+++.|++||.+.+. .++.++|||||||++|+|++ |.+||.+.+..+....+.+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~---- 233 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADN-VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR---- 233 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcC-ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc----
Confidence 9886543321 1223345679999998554 48899999999999999999 8999987776554443332100
Q ss_pred HHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 236 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
. ..+...+..+.+++.+||+.+|++|||+.++++
T Consensus 234 ------------~------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 234 ------------L------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred ------------C------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 011236789999999999999999999999875
No 378
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.8e-38 Score=278.58 Aligned_cols=246 Identities=20% Similarity=0.256 Sum_probs=182.1
Q ss_pred eeeecCCCeEEEEEEECCC--CcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 17 RVVGTGSFGIVFQAKCLET--GETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.||+|+||.||++..... ...+++|.+.... ....+|+.+++.++||||+++++.+. .....|+|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-----EAIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-----CCCccEEEEe
Confidence 3689999999999875433 3456777665332 23457888999999999999999883 3345889999
Q ss_pred ccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCC
Q 018619 90 YVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE 168 (353)
Q Consensus 90 ~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~ 168 (353)
|+. ++|.+.+..........++..++.++.|++.||+|||+ ++++||||||+|||++. ++.+||+|||++.......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nil~~~-~~~~~l~Dfg~~~~~~~~~ 153 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-HNFLHSDLALRNCFLTS-DLTVKVGDYGIGPSRYKED 153 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCeeccCCccceEEEcC-CccEEecccccccccCcch
Confidence 999 47776665433233457778888999999999999999 79999999999999996 7889999999986432211
Q ss_pred ---CcceeeeeceeeChhhhhCC------CCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 169 ---ANISYICSRFYRAPELIFGA------TEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 169 ---~~~~~~~t~~y~aPE~~~~~------~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
......++..|+|||++... ..++.++||||+||++|+|++ |..||...+..+.+..+.......
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~----- 228 (268)
T cd05086 154 YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK----- 228 (268)
T ss_pred hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc-----
Confidence 12234567889999987431 235778999999999999996 577888777666555544321100
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.+...+...+++.+.+++..|| .||++|||++++++
T Consensus 229 ------------------~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 229 ------------------LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred ------------------cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0111122346889999999999 68999999999863
No 379
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.2e-40 Score=306.02 Aligned_cols=246 Identities=25% Similarity=0.352 Sum_probs=202.7
Q ss_pred cceeeEeeeeecCCCeEEEEEEECC-----CCcEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
..+-...+.||+|+||+||+|+.-. ....||||.+++. +..++||++++..++|||||++++++.
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~----- 559 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR----- 559 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-----
Confidence 4456788999999999999998643 3357999998654 345679999999999999999999994
Q ss_pred CceeEEEEecccc-chHHHHHHhhhhc------C----CCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC
Q 018619 80 NELFLNLVMEYVP-ESMYRVLKHYSSA------N----QRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP 148 (353)
Q Consensus 80 ~~~~~~lv~e~~~-~~l~~~l~~~~~~------~----~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~ 148 (353)
....+|+|+|||. |+|-+.|...... + .+++..+...++.||+.|+.||-+ +.+|||||-..|+||.+
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLATRNCLVGE 638 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhhhhceecc
Confidence 3444999999999 8888888653321 2 238899999999999999999999 79999999999999996
Q ss_pred CCCcEEEeeeccccccccCCCcc---eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 018619 149 LTHQVKICDFGSAKQLIAGEANI---SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLV 224 (353)
Q Consensus 149 ~~~~vkl~Dfg~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~ 224 (353)
+..|||+|||+++...+.+... ...-...|||||.+.-. .++++|||||+||+|||+++ |..||.+..+.+.+.
T Consensus 639 -~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~-kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 639 -NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYG-KFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred -ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcC-cccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 8899999999999765543321 22335679999999654 59999999999999999995 899999999998887
Q ss_pred HHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHH
Q 018619 225 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 291 (353)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~ 291 (353)
.+.+..- + .-+.+.|.++.+|+..||+..|.+||+..||
T Consensus 717 ~i~~g~l------------------L----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 717 CIRAGQL------------------L----------SCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred HHHcCCc------------------c----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 7765210 0 0134689999999999999999999999987
No 380
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=7.8e-39 Score=279.23 Aligned_cols=233 Identities=18% Similarity=0.206 Sum_probs=179.4
Q ss_pred eeeecCCCeEEEEEEECCCC----------cEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 17 RVVGTGSFGIVFQAKCLETG----------ETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~----------~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
+.||+|+||.||++.+..++ ..+++|.+.... ..+.+|+.+++.++||||+++++.+.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR------DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec------CC
Confidence 46899999999999998776 357888765433 345678999999999999999998744 22
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCC-------cEEE
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH-------QVKI 155 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~-------~vkl 155 (353)
.++||||+.+ +|.+.+.. ....+++..+..++.||+.||+|||+ +||+||||||+||+++. ++ .+||
T Consensus 75 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~-~~~~~~~~~~~kl 149 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHR---EKNNVSLHWKLDVAKQLASALHYLED-KKLVHGNVCGKNILVAR-YGLNEGYVPFIKL 149 (259)
T ss_pred cEEEEEcCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhh-CCeecccCccceEEEec-CccccCCceeEEe
Confidence 6799999995 55555443 22378999999999999999999999 79999999999999986 44 6999
Q ss_pred eeeccccccccCCCcceeeeeceeeChhhhhCC-CCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCC
Q 018619 156 CDFGSAKQLIAGEANISYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTP 233 (353)
Q Consensus 156 ~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~ 233 (353)
+|||++..... .....++..|+|||.+.+. ..++.++|+||+||++|+|++ |..||...+..+....... .
T Consensus 150 ~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~----~ 222 (259)
T cd05037 150 SDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD----Q 222 (259)
T ss_pred CCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc----C
Confidence 99999986543 2234456779999998665 358999999999999999999 5788876653322111110 0
Q ss_pred CHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 234 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+......+.++|.+||+.||++|||+.++++
T Consensus 223 --------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 223 --------------------------HRLPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred --------------------------CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0001112378999999999999999999999874
No 381
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=1.9e-39 Score=281.45 Aligned_cols=280 Identities=28% Similarity=0.493 Sum_probs=214.2
Q ss_pred cceeeEeeeeecCCCeEEEEEEECC---CCcEEEEEEee--ccccchHHHHHHHHHc-CCCceeecceeeeecCCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLE---TGETVAIKKVL--QDRRYKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+.|.++..||+|.|++||++.+.. .++.||+|.+. .....+..|+++|..+ .+.||+++.+++ ..+..
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~-----rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCF-----RNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhh-----ccCCe
Confidence 5679999999999999999999887 78899999884 3445677899999988 588999999888 55556
Q ss_pred EEEEeccccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 84 LNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 84 ~~lv~e~~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+.+|+||++.. -.++. ..++..+++.+++.++.||+++|+ +|||||||||+|+|.+...++-.|+|||+|.
T Consensus 110 v~ivlp~~~H~~f~~l~-------~~l~~~~i~~Yl~~ll~Al~~~h~-~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLY-------RSLSLAEIRWYLRNLLKALAHLHK-NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred eEEEecccCccCHHHHH-------hcCCHHHHHHHHHHHHHHhhhhhc-cCccccCCCccccccccccCCceEEechhHH
Confidence 88999999953 22232 236788999999999999999999 7999999999999999888889999999986
Q ss_pred ccc-----------------c--C--------------------------CCcceeeeeceeeChhhhhCCCCCCccccc
Q 018619 163 QLI-----------------A--G--------------------------EANISYICSRFYRAPELIFGATEYTTSIDI 197 (353)
Q Consensus 163 ~~~-----------------~--~--------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 197 (353)
... . + .......||++|+|||++...+..++++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 210 0 0 000124689999999999988888999999
Q ss_pred hhHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCCHHHHhhcCcC------------------CCCCcCCCC----C
Q 018619 198 WSAGCVLAELLLGQPLF-PGENAVDQLVEIIKVLGTPTREEIRCMNPN------------------YTDFRFPQI----K 254 (353)
Q Consensus 198 wSlG~il~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~----~ 254 (353)
||.|+|+..++++..|| ...++.+.+.+++..+|.-.......+... |........ +
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 99999999999999887 556666777777776665444332211111 110100000 0
Q ss_pred CCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 255 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
...+........+..+.||+.+||+.||.+|+|++++|.||||.....
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR 389 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence 012333344456779999999999999999999999999999996543
No 382
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.1e-38 Score=277.78 Aligned_cols=261 Identities=26% Similarity=0.354 Sum_probs=190.9
Q ss_pred cceeeEeeeeecCCCeEEEEEEEC----CCCcEEEEEEeecccc-----chHHHHHHHHHcCCCceeecceeeeecCCCC
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCL----ETGETVAIKKVLQDRR-----YKNRELQLMRVMDHPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (353)
...|.+.+.||+|+||.||++... .+++.||+|.+..... .+.+|+.+++.++||||+++++++.. .+
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~ 79 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PG 79 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CC
Confidence 467889999999999999999864 3488999998865433 45689999999999999999887633 22
Q ss_pred ceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
....+++|||++ ++|.+.+.. ....+++..+..++.|++.||+|||+ +|++|+||||+||+++. ++.++|+|||
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg 154 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQR---HRDQINLKRLLLFSSQICKGMDYLGS-QRYIHRDLAARNILVES-EDLVKISDFG 154 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHh---CccccCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcC-CCCEEEcccc
Confidence 345889999997 477666653 23368999999999999999999999 79999999999999996 7889999999
Q ss_pred cccccccCCCcc----eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCC
Q 018619 160 SAKQLIAGEANI----SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTPT 234 (353)
Q Consensus 160 ~a~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~ 234 (353)
.+.......... ...++..|+|||.+.+. .++.++|+||+||++|+|++|..||......... +... .+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~ 231 (284)
T cd05038 155 LAKVLPEDKDYYYVKEPGESPIFWYAPECLRTS-KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR--MIGIAQGQMI 231 (284)
T ss_pred cccccccCCcceeccCCCCCcccccCcHHHccC-CCCcccchHHHhhhhheeeccCCCcccccchhcc--cccccccccc
Confidence 998765332211 12335569999998654 5889999999999999999999998654322100 0000 00000
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
...+........ ....+...+.++.+++.+||+.||.+|||+.++++
T Consensus 232 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 232 VTRLLELLKEGE------------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHHHHHHcCC------------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000000000000 00011246789999999999999999999999874
No 383
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=289.63 Aligned_cols=274 Identities=22% Similarity=0.286 Sum_probs=183.0
Q ss_pred eecceeeEeeeeecCCCeEEEEEEEC----------------CCCcEEEEEEeecccc------------------chHH
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCL----------------ETGETVAIKKVLQDRR------------------YKNR 53 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~vaiK~~~~~~~------------------~~~~ 53 (353)
+..++|.+.++||+|+||+||++... ..++.||||++..+.. ....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 56789999999999999999998642 3456799999854321 1123
Q ss_pred HHHHHHHcCCCce-----eecceeeeecCC---CCceeEEEEeccccc-hHHHHHHhhh-----------h---------
Q 018619 54 ELQLMRVMDHPNV-----ISLKHCFFSTTS---KNELFLNLVMEYVPE-SMYRVLKHYS-----------S--------- 104 (353)
Q Consensus 54 E~~~l~~l~h~~i-----v~~~~~~~~~~~---~~~~~~~lv~e~~~~-~l~~~l~~~~-----------~--------- 104 (353)
|+.++..++|.++ ++++++|..... ......++||||+++ +|.+.+.... .
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6666777766654 455555432211 112347899999984 6666654311 0
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCcce--eeeeceeeCh
Q 018619 105 ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS--YICSRFYRAP 182 (353)
Q Consensus 105 ~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~~t~~y~aP 182 (353)
....+++..++.++.|++.||.|||+ .+|+||||||+||+++. ++.+||+|||++........... ..+|+.|+||
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTV-DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECC-CCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 11235677889999999999999999 79999999999999996 78899999999976543322222 2347899999
Q ss_pred hhhhCCCC-------------------CC--ccccchhHHHHHHHHHhCCC-CCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 183 ELIFGATE-------------------YT--TSIDIWSAGCVLAELLLGQP-LFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 183 E~~~~~~~-------------------~~--~~~DiwSlG~il~~l~~g~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
|.+..... ++ ...|+||+||++|+|++|.. ||............. . .....++.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~---~-~~~~~~r~ 455 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQY---D-NDLNRWRM 455 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhc---c-chHHHHHh
Confidence 99753211 11 24799999999999999985 775432211110000 0 00000100
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCC---CCCCCHHHHhcCccccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP---SLRCTALEACAHPFFDE 299 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp---~~R~t~~~~l~hp~f~~ 299 (353)
.. ...+.-......++.++||+.+||..+| .+|+|++|+|+||||..
T Consensus 456 ~~------------~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 456 YK------------GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred hc------------ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 00 0001111224578999999999999876 68999999999999963
No 384
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=301.21 Aligned_cols=249 Identities=22% Similarity=0.373 Sum_probs=201.6
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCc-----EEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGE-----TVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
...+-.+.+.||+|+||.||.+....... .||||.+.+.. ..+.+|..+|+.++|||||+++++.++...
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 35677889999999999999998765433 49999886542 345589999999999999999999976333
Q ss_pred CCceeEEEEecccc-chHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEE
Q 018619 79 KNELFLNLVMEYVP-ESMYRVLKHYSS---ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVK 154 (353)
Q Consensus 79 ~~~~~~~lv~e~~~-~~l~~~l~~~~~---~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vk 154 (353)
.+|++|||. |+|...++.... ....++......++.++++|++||++ +++|||||-..|+|++. ...+|
T Consensus 770 -----~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~-~~fvHRDLAaRNCLL~~-~r~VK 842 (1025)
T KOG1095|consen 770 -----PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES-KHFVHRDLAARNCLLDE-RRVVK 842 (1025)
T ss_pred -----cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh-CCCcCcchhhhheeecc-cCcEE
Confidence 779999999 577777765211 15668999999999999999999999 79999999999999997 78999
Q ss_pred EeeeccccccccCCCcce--e-eeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 018619 155 ICDFGSAKQLIAGEANIS--Y-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVL 230 (353)
Q Consensus 155 l~Dfg~a~~~~~~~~~~~--~-~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~ 230 (353)
|+|||+|+.+...+.... . .-...|||||.+.. ..++.++|||||||++||+++ |..||.+.++.+.+....+.-
T Consensus 843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg 921 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG 921 (1025)
T ss_pred EcccchhHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC
Confidence 999999996544332211 1 12356999999965 459999999999999999996 889999999988876555421
Q ss_pred CCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 231 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
.++ .+..++..+-+++.+||+-+|++||+...+++
T Consensus 922 ------------------RL~----------~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 922 ------------------RLD----------PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ------------------ccC----------CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 011 23468999999999999999999999998875
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=295.19 Aligned_cols=250 Identities=31% Similarity=0.467 Sum_probs=191.0
Q ss_pred eeEeeeeecCCCeE-EEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHc-CCCceeecceeeeecCCCCceeEEEEec
Q 018619 13 YMAERVVGTGSFGI-VFQAKCLETGETVAIKKVLQDRR-YKNRELQLMRVM-DHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 13 y~~~~~lg~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~-~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.-.+++|.|+.|+ ||++.. .|+.||||.+..... ...+|+.+|+.- +|||||+++.. ..++.+.||..|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEEEeh
Confidence 34457889998876 687765 788999998876554 678999999887 59999997543 367788999999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC----CCCcEEEeeeccccccc
Q 018619 90 YVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP----LTHQVKICDFGSAKQLI 165 (353)
Q Consensus 90 ~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~----~~~~vkl~Dfg~a~~~~ 165 (353)
.|..+|.+++...............+.++.|++.||++||+ .+||||||||.||||+. ...+++|+|||+|+...
T Consensus 584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 99999999887631111222225567889999999999999 69999999999999975 23579999999999887
Q ss_pred cCCCc----ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 166 AGEAN----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 166 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
.+... .+..||-.|+|||++.+.. -..++||+|+||++|+.++| ..||...-.. ...|..
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~------------ 727 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILT------------ 727 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhc------------
Confidence 76543 3457899999999997654 57799999999999999986 8999654322 112222
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
..+.+..+ ...-..++.|||.+||.+||..||+|.++|.||+|-.
T Consensus 728 -----~~~~L~~L---------~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 728 -----GNYTLVHL---------EPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred -----Cccceeee---------ccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 01111110 0111228999999999999999999999999999954
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2e-36 Score=260.72 Aligned_cols=238 Identities=38% Similarity=0.644 Sum_probs=191.3
Q ss_pred CCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccccc-hHH
Q 018619 23 SFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMY 96 (353)
Q Consensus 23 ~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~ 96 (353)
+||.||++.+..+++.+|+|.+.... ....+|+..++.++|+|++++++.+.. ....++++|++++ +|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 58999999999899999999986542 455689999999999999999988743 3458899999997 776
Q ss_pred HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCcceeeee
Q 018619 97 RVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICS 176 (353)
Q Consensus 97 ~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~t 176 (353)
+.+.. ...++...++.++.+++.++.+||+ .+++|+||+|+||+++. ++.++|+|||.+.............++
T Consensus 76 ~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i~~~ni~~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~ 149 (244)
T smart00220 76 DLLKK----RGRLSEDEARFYARQILSALEYLHS-NGIIHRDLKPENILLDE-DGHVKLADFGLARQLDPGGLLTTFVGT 149 (244)
T ss_pred HHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCcCHHHeEECC-CCcEEEccccceeeeccccccccccCC
Confidence 66543 2338999999999999999999999 79999999999999996 688999999999876655444556678
Q ss_pred ceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCC
Q 018619 177 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAH 256 (353)
Q Consensus 177 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (353)
..|+|||.+.+ ..++.++|+||+|+++++|++|..||..........+.........
T Consensus 150 ~~~~~pE~~~~-~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~---------------------- 206 (244)
T smart00220 150 PEYMAPEVLLG-KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF---------------------- 206 (244)
T ss_pred cCCCCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC----------------------
Confidence 89999999864 4478899999999999999999999987443333333222100000
Q ss_pred ccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 257 PWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 257 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
......++.++.+++.+||..||++||++.++++||||
T Consensus 207 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 207 ---PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ---ccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 00001167899999999999999999999999999997
No 387
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-38 Score=289.69 Aligned_cols=247 Identities=26% Similarity=0.373 Sum_probs=209.5
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCc---EEEEEEee-----ccccchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGE---TVAIKKVL-----QDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
+....-.|.++||.|.||.|+.++-+..|+ .||||.++ +++..+..|+.||-+++||||+++.++. .
T Consensus 626 Id~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV-----T 700 (996)
T KOG0196|consen 626 IDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV-----T 700 (996)
T ss_pred cChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE-----e
Confidence 455566899999999999999999887764 59999996 3455667899999999999999999998 4
Q ss_pred CceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
....+-||+|||+ |+|...|.. .++.++..++.-+++.|+.|++||-+ .|+|||||-..|||||+ +..+|++||
T Consensus 701 ks~PvMIiTEyMENGsLDsFLR~---~DGqftviQLVgMLrGIAsGMkYLsd-m~YVHRDLAARNILVNs-nLvCKVsDF 775 (996)
T KOG0196|consen 701 KSKPVMIITEYMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIASGMKYLSD-MNYVHRDLAARNILVNS-NLVCKVSDF 775 (996)
T ss_pred cCceeEEEhhhhhCCcHHHHHhh---cCCceEeehHHHHHHHHHHHhHHHhh-cCchhhhhhhhheeecc-ceEEEeccc
Confidence 4445889999999 677767664 45779999999999999999999999 59999999999999997 899999999
Q ss_pred ccccccccCC-Ccceeee---eceeeChhhhhCCCCCCccccchhHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCC
Q 018619 159 GSAKQLIAGE-ANISYIC---SRFYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTP 233 (353)
Q Consensus 159 g~a~~~~~~~-~~~~~~~---t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~ 233 (353)
|+++...++. ...+..| ...|.|||.+. ...++.+|||||+|++|||.+ .|..||....+.+.+..+.+..+.|
T Consensus 776 GLSRvledd~~~~ytt~GGKIPiRWTAPEAIa-~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLP 854 (996)
T KOG0196|consen 776 GLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLP 854 (996)
T ss_pred cceeecccCCCccccccCCccceeecChhHhh-hcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCC
Confidence 9999775544 2222232 46799999994 456999999999999999976 6999999999999999998866655
Q ss_pred CHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhc
Q 018619 234 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 293 (353)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~ 293 (353)
+. -+.+..+-.|+..||++|-.+||+.+||++
T Consensus 855 pP----------------------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 855 PP----------------------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred CC----------------------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 53 247899999999999999999999999874
No 388
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=279.50 Aligned_cols=244 Identities=31% Similarity=0.460 Sum_probs=196.0
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCC--C--cEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLET--G--ETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTS 78 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~--~--~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 78 (353)
+.++...+.+.||+|-||.||.+..... | -.||||..+.+ .+.+..|..+|+.++||||+++++++..
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e--- 462 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE--- 462 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec---
Confidence 4455556778999999999999886432 3 35899988654 3445679999999999999999999832
Q ss_pred CCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 79 KNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 79 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
...+||||+++ |.|..+++. ....++......+..||+.||.|||+ ..+|||||-..||||.+ ..-|||+|
T Consensus 463 ---~P~WivmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLeS-krfVHRDIAaRNiLVsS-p~CVKLaD 534 (974)
T KOG4257|consen 463 ---QPMWIVMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLES-KRFVHRDIAARNILVSS-PQCVKLAD 534 (974)
T ss_pred ---cceeEEEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhheeecC-cceeeecc
Confidence 22889999999 777777765 45678999999999999999999999 79999999999999997 56699999
Q ss_pred eccccccccCCCcceeee--eceeeChhhhhCCCCCCccccchhHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCC
Q 018619 158 FGSAKQLIAGEANISYIC--SRFYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPT 234 (353)
Q Consensus 158 fg~a~~~~~~~~~~~~~~--t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~~ 234 (353)
||+++.+.+........| ..-|||||.+. ...++.+||||-|||.+||++ .|..||.+-.+.+.+..+.+.-..|
T Consensus 535 FGLSR~~ed~~yYkaS~~kLPIKWmaPESIN-fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP- 612 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKASRGKLPIKWMAPESIN-FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLP- 612 (974)
T ss_pred cchhhhccccchhhccccccceeecCccccc-hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCC-
Confidence 999998766554333333 44599999984 445899999999999999988 5999999988777765544421111
Q ss_pred HHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHH
Q 018619 235 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 291 (353)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~ 291 (353)
.+.++++.+-.|+.+||++||.+||+..++
T Consensus 613 ---------------------------~P~nCPp~LYslmskcWayeP~kRPrftei 642 (974)
T KOG4257|consen 613 ---------------------------CPPNCPPALYSLMSKCWAYEPSKRPRFTEI 642 (974)
T ss_pred ---------------------------CCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence 245789999999999999999999987654
No 389
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=244.80 Aligned_cols=213 Identities=23% Similarity=0.423 Sum_probs=176.0
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-----cchHHHHHHH-HHcCCCceeecceeeeecCCCCcee
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLM-RVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~~l-~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
.+...-+..||+|+||.|-+.++..+|...|+|.+.... ....+|+++. +...+|++|.+++.++...+
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd----- 119 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD----- 119 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc-----
Confidence 344556678999999999999999999999999885332 2223455543 33479999999998865554
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+++.||.|..++.....+....++.++|..+-+++..++.||.|||+.-.++|||+||+|||+|. .|++|+||||++..
T Consensus 120 vwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~-~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 120 VWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY-DGQVKICDFGISGY 198 (282)
T ss_pred EEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc-CCcEEEccccccee
Confidence 99999999999888888888889999999999999999999999999668999999999999996 89999999999987
Q ss_pred cccCCCcceeeeeceeeChhhhhC---CCCCCccccchhHHHHHHHHHhCCCCCCC-CChHHHHHHHHH
Q 018619 164 LIAGEANISYICSRFYRAPELIFG---ATEYTTSIDIWSAGCVLAELLLGQPLFPG-ENAVDQLVEIIK 228 (353)
Q Consensus 164 ~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~~l~~g~~pf~~-~~~~~~~~~~~~ 228 (353)
..+.-..+-..|...|+|||.+.. ...|+.+|||||||+.+.||.+++.||.. .++.+++.++++
T Consensus 199 L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 199 LVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred ehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 766555555677888999999843 23589999999999999999999999965 455666666654
No 390
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=273.94 Aligned_cols=248 Identities=23% Similarity=0.377 Sum_probs=203.9
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
|-+++.+......||.|.||.||.+.++.-.-.||||.++.+. ..+.+|+.+|+.++|||+|++.++| ..+.
T Consensus 262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVC-----T~Ep 336 (1157)
T KOG4278|consen 262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----THEP 336 (1157)
T ss_pred hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhh-----ccCC
Confidence 4566667788899999999999999999999999999997664 4456899999999999999999999 4445
Q ss_pred eEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.+|||+|||. |+|+++|.... ...++.....+++.||..|++||.. +++|||||-..|+||.+ ++.||++|||++
T Consensus 337 PFYIiTEfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEk-knFIHRDLAARNCLVgE-nhiVKvADFGLs 412 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGE-NHIVKVADFGLS 412 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhhccccc-cceEEeeccchh
Confidence 5899999998 89999987643 3457778888999999999999999 89999999999999996 899999999999
Q ss_pred cccccCCCc--ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 162 KQLIAGEAN--ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 162 ~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
+.+..+... -......-|.|||.+ ..+.++.++|||+|||+|||+.| |-.||.+-+....+..+.+.
T Consensus 413 RlMtgDTYTAHAGAKFPIKWTAPEsL-AyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg--------- 482 (1157)
T KOG4278|consen 413 RLMTGDTYTAHAGAKFPIKWTAPESL-AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG--------- 482 (1157)
T ss_pred hhhcCCceecccCccCcccccCcccc-cccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc---------
Confidence 987554321 112225569999998 44568999999999999999996 88999998866555443331
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHH
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 291 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~ 291 (353)
+.+. -+..+++.+-+|++.||+++|.+||+..|+
T Consensus 483 ---------yRM~----------~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 483 ---------YRMD----------GPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred ---------cccc----------CCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 1111 135689999999999999999999998876
No 391
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=275.89 Aligned_cols=252 Identities=24% Similarity=0.352 Sum_probs=205.6
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCC-C--cEEEEEEeecccc-----chHHHHHHHHHcCCCceeecceeeeecC
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLET-G--ETVAIKKVLQDRR-----YKNRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~--~~vaiK~~~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
|+|-.++..+.+.||+|.||.|+++.+... | ..||||.+..+.. .+.+|+.+|..|+|||++++|++..+.
T Consensus 105 clIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q- 183 (1039)
T KOG0199|consen 105 CLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ- 183 (1039)
T ss_pred eeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc-
Confidence 677778888999999999999999987643 3 3589999876543 356899999999999999999998542
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEe
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKIC 156 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~ 156 (353)
..-+|||++. |+|++.|.. .....|.......|+.||+.|+.||.+ +++|||||-..|+|+-+ ...|||+
T Consensus 184 -----p~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLes-krlvHRDLAARNlllas-prtVKI~ 254 (1039)
T KOG0199|consen 184 -----PAMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLES-KRLVHRDLAARNLLLAS-PRTVKIC 254 (1039)
T ss_pred -----hhhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhheecc-cceeeee
Confidence 1459999999 788888775 345678899999999999999999999 89999999999999987 6789999
Q ss_pred eeccccccccCCCcceeee----eceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 018619 157 DFGSAKQLIAGEANISYIC----SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLG 231 (353)
Q Consensus 157 Dfg~a~~~~~~~~~~~~~~----t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~ 231 (353)
|||+.+.+..++......+ ...|.|||.+.. ..++.+||+|++||++|||++ |+.||.+......+..+-+...
T Consensus 255 DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er 333 (1039)
T KOG0199|consen 255 DFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER 333 (1039)
T ss_pred cccceeccCCCCcceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc
Confidence 9999998776665543222 445999999955 459999999999999999996 7899999998877766543110
Q ss_pred CCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcc
Q 018619 232 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 296 (353)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 296 (353)
. + -++.+++++-+++..||+.+|.+|||...|...-+
T Consensus 334 L------------------p----------RPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 334 L------------------P----------RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred C------------------C----------CCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 0 0 12458999999999999999999999988754333
No 392
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=268.91 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=197.3
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+....+++.||+|-||.|.++. ...+..||+|++..+ +..+.+|+++|.+++||||+.+.+++...+ .+
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----Pi 610 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PL 610 (807)
T ss_pred hhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----ch
Confidence 4567899999999999999998 445789999999643 245678999999999999999999995443 38
Q ss_pred EEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++|+||+. |+|.+.+...... .+.......++.||+.|++||.+ .++|||||.+.|+|++. +.++||+|||.++.
T Consensus 611 cmI~EYmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv~~-e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLES-LNFVHRDLATRNCLVDG-EFTIKIADFGMSRN 686 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHh-hchhhccccccceeecC-cccEEecCcccccc
Confidence 89999999 6776666653222 24555666799999999999999 69999999999999996 88999999999997
Q ss_pred cccCCCcc---eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 164 LIAGEANI---SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL--LGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 164 ~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
..+++... ..+-...|||||.+.-. +++++||+|++|+++||++ +...||....+.+.....-..+..+....+
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillg-kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLG-KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV 765 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhc-cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee
Confidence 66554322 23346789999998654 5999999999999999986 578999888877666554443333222111
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
..-+.-++..+.+++.+||..|..+|||.+++-
T Consensus 766 ---------------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 766 ---------------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred ---------------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 011234788899999999999999999999983
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.9e-36 Score=304.53 Aligned_cols=252 Identities=22% Similarity=0.312 Sum_probs=181.4
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccc
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
.|...++||+|+||.||+|++..+++.||+|++........+|+..++.++|||||++++++... ...|+||||+
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~-----~~~~lv~Ey~ 765 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSE-----KGAYLIHEYI 765 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcC-----CCCEEEEeCC
Confidence 45667789999999999999999999999999876655556789999999999999999998433 3478999999
Q ss_pred c-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhH---cCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 92 P-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIH---TVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 92 ~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH---~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
+ |+|.+.+. .+++..+..++.|++.||+||| + .+|+||||||+||+++. ++..++. ||.+.....
T Consensus 766 ~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~-~~iiH~dlkp~Nil~~~-~~~~~~~-~~~~~~~~~- 834 (968)
T PLN00113 766 EGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCS-PAVVVGNLSPEKIIIDG-KDEPHLR-LSLPGLLCT- 834 (968)
T ss_pred CCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCC-CCeecCCCCHHhEEECC-CCceEEE-ecccccccc-
Confidence 8 46666553 3788999999999999999999 6 69999999999999996 6666664 665543221
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhhcCcCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV-DQLVEIIKVLGTPTREEIRCMNPNYT 246 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
.....+|+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+.+..+...... .. .
T Consensus 835 --~~~~~~t~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~-------~ 902 (968)
T PLN00113 835 --DTKCFISSAYVAPETRETK-DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC--HL-------D 902 (968)
T ss_pred --CCCccccccccCcccccCC-CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc--ch-------h
Confidence 1234678999999998654 5899999999999999999999998532111 11111111000000 00 0
Q ss_pred CCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 247 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
.+.-+.... . .........++.+++.+||+.||++|||+.|+++.
T Consensus 903 ~~~~~~~~~-~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 903 MWIDPSIRG-D--VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred heeCccccC-C--CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 000000000 0 00001123367889999999999999999999754
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-35 Score=261.67 Aligned_cols=195 Identities=27% Similarity=0.408 Sum_probs=170.1
Q ss_pred ceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccch------------HHHHHHHHHcC---CCceeecceeeee
Q 018619 11 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK------------NRELQLMRVMD---HPNVISLKHCFFS 75 (353)
Q Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------~~E~~~l~~l~---h~~iv~~~~~~~~ 75 (353)
-.|...+.+|+|+||.|++|.++.+...|+||.+.+.+-.. -.|+.||..++ |+||+++.+.|
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF-- 638 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF-- 638 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee--
Confidence 36999999999999999999999999999999887664322 26999999997 99999999999
Q ss_pred cCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEE
Q 018619 76 TTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKI 155 (353)
Q Consensus 76 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl 155 (353)
+++.++|++||--+.++ .|..++....+++|.++..|+.|++.|+++||+ .||+|||||=+|+.+++ +|-+||
T Consensus 639 ---Eddd~yyl~te~hg~gI--DLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~-~~ivhrdikdenvivd~-~g~~kl 711 (772)
T KOG1152|consen 639 ---EDDDYYYLETEVHGEGI--DLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHD-QGIVHRDIKDENVIVDS-NGFVKL 711 (772)
T ss_pred ---ecCCeeEEEecCCCCCc--chhhhhhccCccchHHHHHHHHHHHhccccccc-cCceecccccccEEEec-CCeEEE
Confidence 77778999999887432 233445567889999999999999999999999 69999999999999997 888999
Q ss_pred eeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCC
Q 018619 156 CDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFP 215 (353)
Q Consensus 156 ~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~ 215 (353)
+|||.|....+ ......+||..|.|||++.|..+.+.+.|||++|++||.++....||.
T Consensus 712 idfgsaa~~ks-gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKS-GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcC-CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999875543 445578999999999999888877999999999999999999998885
No 395
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=267.41 Aligned_cols=256 Identities=26% Similarity=0.402 Sum_probs=205.2
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc----ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.++|.++..+|+|.||.||+|+++.+++..|+|.++-. ....+.|+-+++.-+||||+.+++.+...+ .++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d-----klw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD-----KLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc-----CcE
Confidence 46899999999999999999999999999999988643 455678999999999999999999884433 389
Q ss_pred EEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 86 LVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+.||||+|+-++.+-+ ..+++++.++.++.++.+.||+|||+ .|=+|||||-.||+++. .+.+|++|||.+..+.
T Consensus 89 icMEycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs-~gk~hRdiKGanilltd-~gDvklaDfgvsaqit 163 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHS-QGKIHRDIKGANILLTD-EGDVKLADFGVSAQIT 163 (829)
T ss_pred EEEEecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhc-CCcccccccccceeecc-cCceeecccCchhhhh
Confidence 9999999653333332 57899999999999999999999999 69999999999999995 7889999999987654
Q ss_pred cC-CCcceeeeeceeeChhhhh--CCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcC
Q 018619 166 AG-EANISYICSRFYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 242 (353)
Q Consensus 166 ~~-~~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
.. ....+..||+.|||||+.. ....|+..+|+|++|+...|+-.-++|-........+..+-+-
T Consensus 164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS------------- 230 (829)
T KOG0576|consen 164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS------------- 230 (829)
T ss_pred hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc-------------
Confidence 43 2345689999999999962 2346899999999999999999888776555544444333221
Q ss_pred cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 243 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
.+.-|.+.. ..+.++.+.+|++.+|.++|.+|||++.+|+|||...
T Consensus 231 ----~~qpp~lkD-------k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 231 ----GFQPPTLKD-------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred ----CCCCCcccC-------CccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 111111111 1234778889999999999999999999999999865
No 396
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-35 Score=238.78 Aligned_cols=265 Identities=22% Similarity=0.289 Sum_probs=191.5
Q ss_pred CceeeeeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHc-CCCceeecceeeeec
Q 018619 1 MYLVCCILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVM-DHPNVISLKHCFFST 76 (353)
Q Consensus 1 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 76 (353)
|+.+...-..+.|.|.+.||+|-||.+.+|+|+.++..+++|.++... +.+.+|..---.| .|.||+..|++-+..
T Consensus 14 ~~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt 93 (378)
T KOG1345|consen 14 MEELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT 93 (378)
T ss_pred cccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhc
Confidence 344455556789999999999999999999999999999999987653 3344555433333 589999998876544
Q ss_pred CCCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEE-eCCCCcEE
Q 018619 77 TSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV-DPLTHQVK 154 (353)
Q Consensus 77 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill-~~~~~~vk 154 (353)
.+ ++++++||++ |+|.+.+. ...+.|.....++.|++.|+.|||+ +++||||||.+|||| +++..+||
T Consensus 94 ~d----~YvF~qE~aP~gdL~snv~-----~~GigE~~~K~v~~ql~SAi~fMHs-knlVHRdlK~eNiLif~~df~rvK 163 (378)
T KOG1345|consen 94 SD----AYVFVQEFAPRGDLRSNVE-----AAGIGEANTKKVFAQLLSAIEFMHS-KNLVHRDLKAENILIFDADFYRVK 163 (378)
T ss_pred Cc----eEEEeeccCccchhhhhcC-----cccccHHHHHHHHHHHHHHHHHhhc-cchhhcccccceEEEecCCccEEE
Confidence 33 5779999999 66655443 3568889999999999999999999 899999999999998 44456899
Q ss_pred EeeeccccccccCCCcceeeeeceeeChhhhhCCC----CCCccccchhHHHHHHHHHhCCCCCCCCChHHHH-HHHHHH
Q 018619 155 ICDFGSAKQLIAGEANISYICSRFYRAPELIFGAT----EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL-VEIIKV 229 (353)
Q Consensus 155 l~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~----~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~-~~~~~~ 229 (353)
|||||..+....--.. .-.+..|.+||++.... ...+.+|+|.||+++|.++||.+||+.....+.- ..-++.
T Consensus 164 lcDFG~t~k~g~tV~~--~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w 241 (378)
T KOG1345|consen 164 LCDFGLTRKVGTTVKY--LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW 241 (378)
T ss_pred eeecccccccCceehh--hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH
Confidence 9999998754321111 12255699999874322 2467899999999999999999999854333221 222222
Q ss_pred hCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCC---CCHHHHhcCccccc
Q 018619 230 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR---CTALEACAHPFFDE 299 (353)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R---~t~~~~l~hp~f~~ 299 (353)
.+.... ..|. .-+.+++.+..+.++-|..++.+| .++......-|...
T Consensus 242 ~~rk~~-------------~~P~---------~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 242 LKRKNP-------------ALPK---------KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred hcccCc-------------cCch---------hhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence 111110 0000 113479999999999999999999 45555566667654
No 397
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=247.19 Aligned_cols=259 Identities=27% Similarity=0.337 Sum_probs=185.9
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-ccchHHHHHHHHH--cCCCceeecceeeeecCCCCceeEEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRV--MDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
-....+.+++|+|.||.||+|.- +++.||||+++.. ......|.+|.+. ++|+||++++..=-... .....+++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~eywL 285 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRMEYWL 285 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccceeE
Confidence 34556788999999999999975 6799999999754 3445567666664 58999999876432222 22445889
Q ss_pred Eecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC--------CCeeeccCCCCcEEEeCCCCcEEEee
Q 018619 87 VMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTV--------PRVCHRDLKPQNLLVDPLTHQVKICD 157 (353)
Q Consensus 87 v~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~--------~~i~H~Dlkp~Nill~~~~~~vkl~D 157 (353)
|++|.+ |+|.++|.. ..+++....+++..+++||+|||+- ..|+|||||..||||.+ +.+..|+|
T Consensus 286 Vt~fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~-DlTccIaD 359 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN-DLTCCIAD 359 (534)
T ss_pred EeeeccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc-CCcEEeec
Confidence 999998 888888875 6799999999999999999999983 36999999999999996 89999999
Q ss_pred eccccccccCCCc---ceeeeeceeeChhhhhCCCCCC-----ccccchhHHHHHHHHHhCCCCCC-CCChHHHHHHHHH
Q 018619 158 FGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYT-----TSIDIWSAGCVLAELLLGQPLFP-GENAVDQLVEIIK 228 (353)
Q Consensus 158 fg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~-----~~~DiwSlG~il~~l~~g~~pf~-~~~~~~~~~~~~~ 228 (353)
||+|..+..+... ...+||..|||||++.|.-++. .+.||||+|.+||||++.-..+. +..+.-++---.+
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 9999887654332 3468999999999998765554 46899999999999998654332 1111101000111
Q ss_pred HhCCCCHHHHhhcC------cCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHH
Q 018619 229 VLGTPTREEIRCMN------PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 289 (353)
Q Consensus 229 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~ 289 (353)
.-..|..+.++... |.+.+ .|..- .-...+.+.+.-||.-||+-|+|+.
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~---------~W~~h---~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPD---------AWRKH---AGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChh---------hhhcC---ccHHHHHHHHHHHcCCchhhhhhhH
Confidence 11222333332211 11111 12111 1345688999999999999999985
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-32 Score=260.48 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=193.0
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECC-------CCcEEEEEEeecc-----ccchHHHHHHHHHc-CCCceeeccee
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLE-------TGETVAIKKVLQD-----RRYKNRELQLMRVM-DHPNVISLKHC 72 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~-----~~~~~~E~~~l~~l-~h~~iv~~~~~ 72 (353)
|.+..++..+.+.||+|+||.|+++.-.. ....||+|.+... ...+..|+++|+.+ +||||+.+.++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 33445556778899999999999987431 1456999988643 34456899999988 59999999998
Q ss_pred eeecCCCCceeEEEEecccc-chHHHHHHhhh---h-------cC--CCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccC
Q 018619 73 FFSTTSKNELFLNLVMEYVP-ESMYRVLKHYS---S-------AN--QRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL 139 (353)
Q Consensus 73 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~-------~~--~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl 139 (353)
+.. ...+++|+|||. |+|...+.... . .. ..++......++.||+.|++||++ ..++||||
T Consensus 371 ~t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDL 444 (609)
T KOG0200|consen 371 CTQ-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDL 444 (609)
T ss_pred ecc-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhh
Confidence 844 445889999999 78888887654 0 11 138999999999999999999999 79999999
Q ss_pred CCCcEEEeCCCCcEEEeeeccccccccCCCcce--eee--eceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCC
Q 018619 140 KPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS--YIC--SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLF 214 (353)
Q Consensus 140 kp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~~--t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf 214 (353)
-..|||+.. +..+||+|||+|+.......... ..+ ...|||||.+.. ..|+.+|||||+|++|||+++ |..||
T Consensus 445 AaRNVLi~~-~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PY 522 (609)
T KOG0200|consen 445 AARNVLITK-NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPY 522 (609)
T ss_pred hhhhEEecC-CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCC
Confidence 999999996 78999999999986544333221 111 234999999966 569999999999999999996 78999
Q ss_pred CCCC-hHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 215 PGEN-AVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 215 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.+.. ..+... ..+.... -.-|...++++-++++.||+.+|.+||+..++.
T Consensus 523 p~~~~~~~l~~-~l~~G~r---------------------------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~ 573 (609)
T KOG0200|consen 523 PGIPPTEELLE-FLKEGNR---------------------------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECV 573 (609)
T ss_pred CCCCcHHHHHH-HHhcCCC---------------------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence 8855 333332 2221000 012345799999999999999999999998875
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.98 E-value=9.2e-31 Score=220.24 Aligned_cols=208 Identities=37% Similarity=0.589 Sum_probs=174.6
Q ss_pred eecCCCeEEEEEEECCCCcEEEEEEeecccc-----chHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEecccc-
Q 018619 19 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP- 92 (353)
Q Consensus 19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~- 92 (353)
||+|++|.||++....+++.+++|++..... ...+|+..++.++|++++++++.+.. ....++++|+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-----ENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-----CCeEEEEEecCCC
Confidence 6899999999999988899999999976643 46789999999999999999988733 345889999999
Q ss_pred chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCC-Ccc
Q 018619 93 ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGE-ANI 171 (353)
Q Consensus 93 ~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~-~~~ 171 (353)
++|.+.+... ...++...++.++.+++.++++||+ .|++|+||+|.||+++..++.++|+|||.+....... ...
T Consensus 76 ~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~-~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~ 151 (215)
T cd00180 76 GSLKDLLKEN---EGKLSEDEILRILLQILEGLEYLHS-NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLK 151 (215)
T ss_pred CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhh
Confidence 5766665531 1468999999999999999999999 7999999999999999535789999999998654432 123
Q ss_pred eeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCC
Q 018619 172 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 251 (353)
Q Consensus 172 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (353)
...+...|++||.+......+.++|+||+|+++++|
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 355678899999986543578999999999999999
Q ss_pred CCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCc
Q 018619 252 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 295 (353)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp 295 (353)
..+.+++.+|++.||++||++.++++|+
T Consensus 188 ----------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1456899999999999999999999885
No 400
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-31 Score=233.05 Aligned_cols=256 Identities=24% Similarity=0.304 Sum_probs=182.9
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHH--cCCCceeecceeeeecCCCCceeEEE
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-YKNRELQLMRV--MDHPNVISLKHCFFSTTSKNELFLNL 86 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~E~~~l~~--l~h~~iv~~~~~~~~~~~~~~~~~~l 86 (353)
+.+..+.+.||+|.||.||+++. -|+.||||++....+ .-.+|.++.+. |+|+||+.+++.=.... ..-..+++
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQLwL 286 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQLWL 286 (513)
T ss_pred hheeEEEEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEEEEE
Confidence 45678999999999999999986 788999999975443 34477777764 59999999876532211 23346999
Q ss_pred Eecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC-------CCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 87 VMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTV-------PRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 87 v~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~-------~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
|++|-+ |+|+++|.. ..++.+...+++..++.||++||.. ..|+|||||..||||.+ ++.+.|+|+
T Consensus 287 vTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk-n~~C~IADL 360 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADL 360 (513)
T ss_pred eeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc-CCcEEEeec
Confidence 999999 899998875 6789999999999999999999972 36999999999999996 899999999
Q ss_pred ccccccccCC-----CcceeeeeceeeChhhhhCCCCC-----CccccchhHHHHHHHHHhC----------CCCCCCCC
Q 018619 159 GSAKQLIAGE-----ANISYICSRFYRAPELIFGATEY-----TTSIDIWSAGCVLAELLLG----------QPLFPGEN 218 (353)
Q Consensus 159 g~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~-----~~~~DiwSlG~il~~l~~g----------~~pf~~~~ 218 (353)
|+|....... .....+||..|||||++...-.. -..+||||||.++||++.. ++||.+--
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 9998765542 23467899999999999543211 1368999999999999742 46775432
Q ss_pred hHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHH
Q 018619 219 AVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 291 (353)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~ 291 (353)
+.+. ..+.+.+. ...-.+.......|.. ...-..+..+++.||..+|.-|.|+--+
T Consensus 441 p~DP-----------s~eeMrkV---VCv~~~RP~ipnrW~s---~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 441 PSDP-----------SFEEMRKV---VCVQKLRPNIPNRWKS---DPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred CCCC-----------CHHHHhcc---eeecccCCCCCccccc---CHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 2111 11111100 0000011111122322 0111245678999999999999998665
No 401
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.98 E-value=2.1e-32 Score=273.36 Aligned_cols=207 Identities=17% Similarity=0.177 Sum_probs=145.8
Q ss_pred HcCC-CceeecceeeeecCC--CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeee
Q 018619 60 VMDH-PNVISLKHCFFSTTS--KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCH 136 (353)
Q Consensus 60 ~l~h-~~iv~~~~~~~~~~~--~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H 136 (353)
.++| +||+++++.|-.... .....++.++|+++++|.+.+.. ....+++.+++.++.||+.||.|||+ +||+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~-~gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHS-QGIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHh-CCeee
Confidence 3345 577777776522221 11234668899999998888753 34669999999999999999999999 79999
Q ss_pred ccCCCCcEEEeC------------------CCCcEEEeeeccccccccCC-----------------CcceeeeeceeeC
Q 018619 137 RDLKPQNLLVDP------------------LTHQVKICDFGSAKQLIAGE-----------------ANISYICSRFYRA 181 (353)
Q Consensus 137 ~Dlkp~Nill~~------------------~~~~vkl~Dfg~a~~~~~~~-----------------~~~~~~~t~~y~a 181 (353)
|||||+||||+. .++.+|++|||+++...... ......+|++|+|
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999963 13456666666665321100 0012357889999
Q ss_pred hhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccc
Q 018619 182 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKV 261 (353)
Q Consensus 182 PE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
||++.+.. ++.++|||||||+||||++|.+|+.... .....+.... .++.
T Consensus 184 PE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~~~~-------------------------- 233 (793)
T PLN00181 184 PEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-LPPQ-------------------------- 233 (793)
T ss_pred hhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-cChh--------------------------
Confidence 99987654 8999999999999999999988875322 1111111110 0000
Q ss_pred cCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 262 FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 262 ~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
. ..-.+...+++.+||+.||.+|||+.|+++||||...+
T Consensus 234 ~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~ 272 (793)
T PLN00181 234 I-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPR 272 (793)
T ss_pred h-hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhh
Confidence 0 01144567899999999999999999999999998753
No 402
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=247.93 Aligned_cols=241 Identities=28% Similarity=0.377 Sum_probs=190.6
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCc----EEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
..+..++||+|+||+||++.....|+ +||||++... ...+.+|+-+|..++|||++++.+++....
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~----- 771 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST----- 771 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-----
Confidence 34556799999999999999877765 5788877543 233457999999999999999999873322
Q ss_pred eEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
+-||++|++ |.|++.++. ...++-......|..||++|++|||. ++++||||-..|+||.+ ...+|+.|||++
T Consensus 772 -~qlvtq~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~-qrlVHrdLaaRNVLVks-P~hvkitdfgla 845 (1177)
T KOG1025|consen 772 -LQLVTQLMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEE-QRLVHRDLAARNVLVKS-PNHVKITDFGLA 845 (1177)
T ss_pred -HHHHHHhcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHh-cchhhhhhhhhheeecC-CCeEEEEecchh
Confidence 558999999 677777765 45678888999999999999999999 79999999999999997 667999999999
Q ss_pred cccccCCCcceeee---eceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 018619 162 KQLIAGEANISYIC---SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 237 (353)
Q Consensus 162 ~~~~~~~~~~~~~~---t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
+....+.......+ .+-|+|-|.+.. ..|+.+|||||+||++||++| |..|+.+....+.-..+.. +.+
T Consensus 846 ~ll~~d~~ey~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~----geR-- 918 (1177)
T KOG1025|consen 846 KLLAPDEKEYSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK----GER-- 918 (1177)
T ss_pred hccCcccccccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc----ccc--
Confidence 98776665544333 456999999854 569999999999999999996 8899988765544332222 110
Q ss_pred HhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 238 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
++ -+...+-++--++.+||..|+..||++.++.
T Consensus 919 ------------Ls----------qPpiCtiDVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 919 ------------LS----------QPPICTIDVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred ------------CC----------CCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence 00 1234778899999999999999999998764
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=3e-30 Score=219.87 Aligned_cols=201 Identities=34% Similarity=0.577 Sum_probs=166.7
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
|.+.+.||+|++|.||++.+..+++.+++|.+... .....+|+..++.++|+|++++++.+. .....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 67889999999999999999988999999998654 345567999999999999999988773 23448899
Q ss_pred eccccc-hHHHHHHhhhhcCCC-CCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 88 MEYVPE-SMYRVLKHYSSANQR-MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 88 ~e~~~~-~l~~~l~~~~~~~~~-l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+|++++ +|.+.+.. ... +++..++.++.+++.++.+||+ ++++|+||+|+||+++. ++.++|+|||.+....
T Consensus 76 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~di~~~ni~v~~-~~~~~l~d~g~~~~~~ 149 (225)
T smart00221 76 MEYCEGGDLFDYLRK----KGGKLSEEEARFYLRQILEALEYLHS-LGIVHRDLKPENILLGM-DGLVKLADFGLARFIH 149 (225)
T ss_pred EeccCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCCEEEeeCceeeEec
Confidence 999997 77666653 223 8899999999999999999999 79999999999999996 6889999999998765
Q ss_pred cCC--CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCC-CChHHHHH
Q 018619 166 AGE--ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG-ENAVDQLV 224 (353)
Q Consensus 166 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~-~~~~~~~~ 224 (353)
... ......++..|++||.+.+...++.++|+||+|+++++|++|+.||.. .+....+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~ 211 (225)
T smart00221 150 RDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLS 211 (225)
T ss_pred CcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHH
Confidence 543 334556788899999974444578899999999999999999999977 44443333
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=5.7e-30 Score=210.22 Aligned_cols=167 Identities=20% Similarity=0.174 Sum_probs=125.1
Q ss_pred chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCcce
Q 018619 93 ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS 172 (353)
Q Consensus 93 ~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~ 172 (353)
|+|.+.+.. .+..+++..++.++.|++.||+|||+ ++ ||+|||++. ++.+|+ ||++.......
T Consensus 1 GsL~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~-~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEV---RGRPLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTW-DGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcC-ccceee--ccceEeecccc----
Confidence 456666653 24579999999999999999999999 67 999999996 788998 99987654322
Q ss_pred eeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhcCcCCCCCcCC
Q 018619 173 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ-LVEIIKVLGTPTREEIRCMNPNYTDFRFP 251 (353)
Q Consensus 173 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (353)
..||+.|+|||++.+. .++.++||||+||++|+|++|+.||........ +..+..........
T Consensus 64 ~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------- 127 (176)
T smart00750 64 SRVDPYFMAPEVIQGQ-SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPR--------------- 127 (176)
T ss_pred CCCcccccChHHhcCC-CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcc---------------
Confidence 2678999999999664 589999999999999999999999976544322 22222211100000
Q ss_pred CCCCCccccccCCCCCh--hHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 252 QIKAHPWHKVFHKRMPP--EAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 252 ~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
.......++. ++.++|.+||+.||.+|||+.+++.|+|+..
T Consensus 128 -------~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 128 -------DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred -------ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 0000012333 6999999999999999999999999999864
No 405
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=217.15 Aligned_cols=250 Identities=19% Similarity=0.241 Sum_probs=194.5
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCC-----CcEEEEEEeeccccch-----HHHHHHHHHcCCCceeecceeeeecC
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDRRYK-----NRELQLMRVMDHPNVISLKHCFFSTT 77 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~-----~~E~~~l~~l~h~~iv~~~~~~~~~~ 77 (353)
+...+.++...+-+|.||.||.+..+.. .+.|.+|.+......+ ..|..++..+.|||++++.++...
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie-- 358 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE-- 358 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee--
Confidence 5567888999999999999999965432 2446677776554433 367778888899999999887653
Q ss_pred CCCceeEEEEecccc-chHHHHHHhhhh----cCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCc
Q 018619 78 SKNELFLNLVMEYVP-ESMYRVLKHYSS----ANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ 152 (353)
Q Consensus 78 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~----~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~ 152 (353)
+....++++.+.+ |+|...+...+. ..+.++-.+...++.|++.|++|||+ +|++|.||-..|++||. .-+
T Consensus 359 --~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~-~~ViHkDiAaRNCvIdd-~Lq 434 (563)
T KOG1024|consen 359 --DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDD-QLQ 434 (563)
T ss_pred --ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh-cCcccchhhhhcceehh-hee
Confidence 2334667888888 777777763321 23457888889999999999999999 89999999999999995 789
Q ss_pred EEEeeeccccccccCCCc---ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 018619 153 VKICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 228 (353)
Q Consensus 153 vkl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~~~~ 228 (353)
+||+|=.+++...+.+.. ...-...-|||||.+.. ..|+.++|+||||++||||+| |+.|+..-++.++...+.+
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd 513 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD 513 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence 999999999876544321 11122456999999955 459999999999999999996 8999999999888766654
Q ss_pred HhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 229 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
. +.+. -+-++++++..++.-||+.+|++||+.+|+.
T Consensus 514 G------------------yRla----------QP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 514 G------------------YRLA----------QPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred c------------------ceec----------CCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 2 1111 1246899999999999999999999999885
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.9e-30 Score=245.76 Aligned_cols=257 Identities=24% Similarity=0.356 Sum_probs=191.4
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeec----cc------cchHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ----DR------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
....++|.|++|.|+.+......+.++.|.+.. .. .....|..+-..+.|||++.....++....
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~----- 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG----- 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc-----
Confidence 567799999999999988877777666665431 11 012245666677899999887766643332
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
.+-+||||+++|...+.. ...++...+..++.||+.|++|||+ .||.|||+||+|+++.. ++.+||+|||.+..
T Consensus 396 ~~~~mE~~~~Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~-~GiahrdlK~enll~~~-~g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 396 ILQSMEYCPYDLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHS-MGLAHRDLKLENLLVTE-NGILKIIDFGAASV 469 (601)
T ss_pred chhhhhcccHHHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHh-cCceeccCccccEEEec-CCceEEeecCccee
Confidence 223499999977776653 3578999999999999999999999 69999999999999996 88999999999886
Q ss_pred cccCC-----CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Q 018619 164 LIAGE-----ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 238 (353)
Q Consensus 164 ~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
..-.. .....+|+..|+|||++.+...-....||||.|++++.|.+|+.||......+....-...
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~--------- 540 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY--------- 540 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc---------
Confidence 54322 2345788999999999988775567899999999999999999999765544332100000
Q ss_pred hhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 239 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
....... ..+ ..+...++...+.+|.+||+.||.+|.|+++|++.+||+.+.
T Consensus 541 ------~~~~~~~---~~~--~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 541 ------SDQRNIF---EGP--NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred ------ccccccc---cCh--HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 0000000 000 111234788999999999999999999999999999999864
No 407
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.96 E-value=5e-28 Score=196.01 Aligned_cols=211 Identities=22% Similarity=0.326 Sum_probs=171.4
Q ss_pred eeeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHcCC-CceeecceeeeecCCCCc
Q 018619 5 CCILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--YKNRELQLMRVMDH-PNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~ 81 (353)
..++.+++|.+++.||+|+||.+|++.+..+|+.||||.-.+..+ ....|..+.+.|++ ..|..+..+. ...
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~-----~e~ 83 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYG-----TEK 83 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhc-----ccc
Confidence 356889999999999999999999999999999999998866543 44579999999975 3455554444 334
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEe--CCCCcEEEeeec
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVD--PLTHQVKICDFG 159 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~--~~~~~vkl~Dfg 159 (353)
.+-.+||++++.+|.+++.. .+.+++...+..++-|++.-++|+|. ++++||||||+|+|.. ....++.|+|||
T Consensus 84 ~ynvlVMdLLGPsLEdLfnf---C~R~ftmkTvLMLaDQml~RiEyvH~-r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 84 DYNVLVMDLLGPSLEDLFNF---CSRRFTMKTVLMLADQMLSRIEYVHL-RNFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred ccceeeeeccCccHHHHHHH---HhhhhhHHhHHHHHHHHHHHHHHHHh-hccccccCCccceeeccccccceEEEEecc
Confidence 44669999999998887765 45779999999999999999999999 8999999999999984 334579999999
Q ss_pred cccccccCCC--------cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 018619 160 SAKQLIAGEA--------NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 225 (353)
Q Consensus 160 ~a~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~ 225 (353)
+|+...+... .....||..|.|--...+.. .+.+.|+-|+|.+|..+--|.+||++.......++
T Consensus 160 LaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK 232 (341)
T KOG1163|consen 160 LAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK 232 (341)
T ss_pred chhhhccccccccCccccCCccceeeeehhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhhHHHH
Confidence 9997655432 23567899999987766543 68889999999999999999999998765544443
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=6.7e-26 Score=203.47 Aligned_cols=251 Identities=19% Similarity=0.197 Sum_probs=188.0
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCC-cEEEEEEeeccc----cchHHHHHHHHHcCC----CceeecceeeeecCCCCce
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDR----RYKNRELQLMRVMDH----PNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~----~~~~~E~~~l~~l~h----~~iv~~~~~~~~~~~~~~~ 82 (353)
+|.+.+.||+|+||.||.+.+..++ +.+|+|...... .....|..++..+.. +++..+++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 8999999999999999999987774 678999776532 256789999998873 46677665542 2445
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCC----CcEEEeee
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLT----HQVKICDF 158 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~----~~vkl~Df 158 (353)
+.|+||+.++.+|.++..... .+.++...+..++.|++.+|++||+ .|++||||||+|+++.... ..+.|.||
T Consensus 95 ~~~iVM~l~G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~-~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 95 FNFIVMSLLGPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHS-KGFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred eeEEEEeccCccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHh-cCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 678999999999988775533 6889999999999999999999999 7999999999999997533 57999999
Q ss_pred cccc--ccccCC--------C-cceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 018619 159 GSAK--QLIAGE--------A-NISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 227 (353)
Q Consensus 159 g~a~--~~~~~~--------~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~ 227 (353)
|+|+ ...... . .....||..|.|+.+..+. ..+.+.|+||++.++.+++.|..||..........+..
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~-e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGI-EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCC-ccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 9998 322111 1 1234589999999988665 48999999999999999999999997766433333222
Q ss_pred HHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 228 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+........ . +....+.++..+...+-..+...+|....+...
T Consensus 251 ~~~~~~~~~---------------~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 251 KDPRKLLTD---------------R---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred HHhhhhccc---------------c---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 211000000 0 112245677777777777888999987766433
No 409
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=224.68 Aligned_cols=237 Identities=26% Similarity=0.387 Sum_probs=191.4
Q ss_pred eeecCCCeEEEEEEEC---CCCcEEEEEEeeccc------cchHHHHHHHHHcC-CCceeecceeeeecCCCCceeEEEE
Q 018619 18 VVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR------RYKNRELQLMRVMD-HPNVISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~------~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~lv 87 (353)
++|+|+||.|++++.. ..|..||+|...+.. .....|..++...+ ||.+|++.-.| +....++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf-----qt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF-----QTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee-----ccccchhHh
Confidence 4799999999987632 456789999775431 22335777888886 99999998887 555558899
Q ss_pred eccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC
Q 018619 88 MEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 88 ~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
+++..|+ .+.........+.+...+.+...++.|++++|+ .+|+|||+|++||+++. +|.+++.|||+++.....
T Consensus 76 ld~~rgg---~lft~l~~~~~f~~~~~~~~~aelaLald~lh~-l~iiyrd~k~enilld~-~Ghi~~tdfglske~v~~ 150 (612)
T KOG0603|consen 76 LDFLRGG---DLFTRLSKEVMFDELDVAFYLAELALALDHLHK-LGIAYRDYKLENVLLLL-EGHIKLTDFGLSKEAVKE 150 (612)
T ss_pred hhhcccc---hhhhccccCCchHHHHHHHHHHHHHHHHhhcch-hHHHHhcccccceeecc-cCccccCCchhhhHhHhh
Confidence 9999975 333334456778889999999999999999999 69999999999999997 888999999999876655
Q ss_pred CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCC
Q 018619 168 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 247 (353)
Q Consensus 168 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
+.. +||..|||||++. ....++|.||+|+++++|++|..||.. +....|.+.
T Consensus 151 ~~~---cgt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~------------------ 202 (612)
T KOG0603|consen 151 KIA---CGTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA------------------ 202 (612)
T ss_pred hhc---ccchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh------------------
Confidence 544 8899999999986 367899999999999999999999988 444444441
Q ss_pred CcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC-----HHHHhcCcccccccCC
Q 018619 248 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 303 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~f~~~~~~ 303 (353)
...++..++..+++++..++..+|..|.. +.++++|+||+.+.+.
T Consensus 203 -----------~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 203 -----------ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred -----------ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 01123457899999999999999999985 4799999999998776
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=6.3e-26 Score=191.83 Aligned_cols=203 Identities=22% Similarity=0.356 Sum_probs=168.7
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHcC-CCceeecceeeeecCCCCce
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--RRYKNRELQLMRVMD-HPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 82 (353)
.++.+-+|++.+.||+|+||..+.+++..+++.||||.-+.. ......|....+.|. .+.|...+ ++. +...
T Consensus 23 ~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vY--YFG---qeG~ 97 (449)
T KOG1165|consen 23 VLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVY--YFG---QEGK 97 (449)
T ss_pred ceEecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCcee--eec---cccc
Confidence 357788999999999999999999999999999999977543 345567888888885 57777653 222 2233
Q ss_pred eEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC----CCCcEEEeee
Q 018619 83 FLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP----LTHQVKICDF 158 (353)
Q Consensus 83 ~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~----~~~~vkl~Df 158 (353)
+-.+|+|+++.+|.+++.- .+.+|+...+..++.|++.-++++|+ +++|+|||||+|+||.. +.+.|.++||
T Consensus 98 ~NiLVidLLGPSLEDLFD~---CgR~FSvKTV~miA~Qmi~rie~vH~-k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 98 YNILVIDLLGPSLEDLFDL---CGRRFSVKTVAMIAKQMITRIEYVHE-KDLIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred hhhhhhhhhCcCHHHHHHH---hcCcccHHhHHHHHHHHHHHHHHHHh-cceeecccCccceeecCCCCCCCceEEEEec
Confidence 4558999999999888765 57889999999999999999999999 89999999999999952 2457999999
Q ss_pred ccccccccCCCc--------ceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 018619 159 GSAKQLIAGEAN--------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 218 (353)
Q Consensus 159 g~a~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~ 218 (353)
|+|+.+.+.... .+..||..|||--..+|.+ -+.+.|+-|||-+++..+-|.+||++..
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 999987665442 3467899999988877765 7899999999999999999999998754
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=1.3e-26 Score=207.73 Aligned_cols=170 Identities=19% Similarity=0.269 Sum_probs=126.1
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECC-CCcEEEEEEeecc---------ccchHHHHHHHHHcCCCceee-cceeeeec
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQD---------RRYKNRELQLMRVMDHPNVIS-LKHCFFST 76 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~---------~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~ 76 (353)
...++|.+.+.||+|+||+||+|.+.. +++.||||+.... ...+.+|+.+|+.++|+|++. +++ +
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~-~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA-T--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE-c---
Confidence 346789999999999999999999876 6778899986422 233578999999999999985 322 1
Q ss_pred CCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccC-CCCcEEEeCCCCcEEE
Q 018619 77 TSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL-KPQNLLVDPLTHQVKI 155 (353)
Q Consensus 77 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl-kp~Nill~~~~~~vkl 155 (353)
. ..|+|||||.|..+.... ... ...++.|++.||.|||+ +||+|||| ||+|||++. ++.+||
T Consensus 91 ~-----~~~LVmE~~~G~~L~~~~----~~~------~~~~~~~i~~aL~~lH~-~gIiHrDL~KP~NILv~~-~~~ikL 153 (365)
T PRK09188 91 G-----KDGLVRGWTEGVPLHLAR----PHG------DPAWFRSAHRALRDLHR-AGITHNDLAKPQNWLMGP-DGEAAV 153 (365)
T ss_pred C-----CcEEEEEccCCCCHHHhC----ccc------hHHHHHHHHHHHHHHHH-CCCeeCCCCCcceEEEcC-CCCEEE
Confidence 1 267999999975333211 111 14678899999999999 79999999 999999985 778999
Q ss_pred eeeccccccccCCCc---------ceeeeeceeeChhhhhCCC-----CCCccccch
Q 018619 156 CDFGSAKQLIAGEAN---------ISYICSRFYRAPELIFGAT-----EYTTSIDIW 198 (353)
Q Consensus 156 ~Dfg~a~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~-----~~~~~~Diw 198 (353)
+|||+|+........ ....+++.|.|||.+...+ ..+..+|-|
T Consensus 154 iDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 154 IDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred EECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 999999866443321 2345677899999873321 123446666
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=7.5e-25 Score=197.08 Aligned_cols=257 Identities=33% Similarity=0.474 Sum_probs=194.9
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-------cchHHHHHHHHHcCCC-ceeecceeeeecCCCCceeE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRVMDHP-NVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~~~~~ 84 (353)
|.+.+.||.|+||.||.+.+. ..+++|.+.... ....+|+.++..+.|+ +++++.+.+. .....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-----DEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-----cCCEE
Confidence 789999999999999999986 788999885432 2345788999999988 7999998882 22227
Q ss_pred EEEeccccch-HHHHHHhhhhcC---CCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecc
Q 018619 85 NLVMEYVPES-MYRVLKHYSSAN---QRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGS 160 (353)
Q Consensus 85 ~lv~e~~~~~-l~~~l~~~~~~~---~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~ 160 (353)
+++++++.+. +...+. .. ..++...+..++.|++.+++++|+ .+++|||+||+||+++..+..++++|||.
T Consensus 74 ~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~H~-~~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 74 YLVMEYVDGGSLEDLLK----KIGRKGPLSESEALFILAQILSALEYLHS-KGIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred EEEEecCCCCcHHHHHH----hcccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 8999999964 332222 22 379999999999999999999999 79999999999999997333799999999
Q ss_pred ccccccCC-------CcceeeeeceeeChhhhhCC--CCCCccccchhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHH
Q 018619 161 AKQLIAGE-------ANISYICSRFYRAPELIFGA--TEYTTSIDIWSAGCVLAELLLGQPLFPGENA---VDQLVEIIK 228 (353)
Q Consensus 161 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---~~~~~~~~~ 228 (353)
+....... ......+|..|++||.+.+. ..++...|+||+|++++++++|..||..... .......+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 98554433 23567889999999999763 4688999999999999999999999877764 333333333
Q ss_pred HhCCC-CHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccccC
Q 018619 229 VLGTP-TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 302 (353)
Q Consensus 229 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~~ 302 (353)
....+ ..... . ..........+.+++.+++..+|..|.+..+...+++......
T Consensus 229 ~~~~~~~~~~~------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 283 (384)
T COG0515 229 ELPTPSLASPL------------S--------PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKL 283 (384)
T ss_pred hcCCccccccc------------C--------ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCccc
Confidence 22222 00000 0 0000112367899999999999999999999998877765443
No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.94 E-value=1e-26 Score=222.38 Aligned_cols=225 Identities=28% Similarity=0.482 Sum_probs=170.2
Q ss_pred ecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEe
Q 018619 9 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
....|..++.+..|+||.||+++|+.+.+++|+ ++.++....+. ++....+|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~lilRn---ilt~a~npfvv--------------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLILRN---ILTFAGNPFVV--------------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhh-cccccchhhhc---cccccCCccee---------------------
Confidence 456889999999999999999999999999999 46555433322 22222222222
Q ss_pred ccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccC-
Q 018619 89 EYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG- 167 (353)
Q Consensus 89 e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~- 167 (353)
|+-...++ .-++++.. ++.+++|||+ -||+|||+||+|.+|.. -|.+|++|||+++.....
T Consensus 136 ----gDc~tllk----~~g~lPvd--------mvla~Eylh~-ygivhrdlkpdnllIT~-mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ----GDCATLLK----NIGPLPVD--------MVLAVEYLHS-YGIVHRDLKPDNLLITS-MGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ----chhhhhcc----cCCCCcch--------hhHHhHhhcc-CCeecCCCCCCcceeee-cccccccchhhhhhhhhhc
Confidence 22112222 22344443 3788999999 79999999999999997 788999999998743211
Q ss_pred -------C--------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 018619 168 -------E--------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 168 -------~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
. .....+|||.|+|||++.. +.|+..+|+|++|+|+|+.+.|..||.+.+.++.+.+.+.....
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~ 276 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE 276 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc
Confidence 0 1124578999999999965 45999999999999999999999999999999998888773221
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCC---CHHHHhcCcccccccCC
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC---TALEACAHPFFDELREP 303 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~---t~~~~l~hp~f~~~~~~ 303 (353)
|.+. ...++++++++|.++|+.+|..|. .+.++.+|+||+.+.+.
T Consensus 277 -------------------------wpE~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 277 -------------------------WPEE-DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred -------------------------cccc-CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 1111 134789999999999999999997 46788999999998876
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.92 E-value=2.1e-24 Score=185.62 Aligned_cols=237 Identities=24% Similarity=0.315 Sum_probs=143.7
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchH-------HHHHHHHHcC----------CCceeecceee-
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRVMD----------HPNVISLKHCF- 73 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------~E~~~l~~l~----------h~~iv~~~~~~- 73 (353)
.+...+.||.|+++.||.+.+..||+.+|+|++........ +|.-....+. |-.++...+..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 56778899999999999999999999999998854332221 2221111111 11111111211
Q ss_pred -------eecCCC-Cce---eEEEEeccccchHHHHHHhhhhcCCC---CCHHHHHHHHHHHHHHHHHhHcCCCeeeccC
Q 018619 74 -------FSTTSK-NEL---FLNLVMEYVPESMYRVLKHYSSANQR---MPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL 139 (353)
Q Consensus 74 -------~~~~~~-~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~---l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl 139 (353)
...... ... ..+++|+-+.++|...+......... +.......+..|++..+++||+ .|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~-~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS-YGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh-cceEeccc
Confidence 111110 111 24678898888887776542222222 3333334455899999999999 79999999
Q ss_pred CCCcEEEeCCCCcEEEeeeccccccccCCCcceeeeeceeeChhhhhCC-------CCCCccccchhHHHHHHHHHhCCC
Q 018619 140 KPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGA-------TEYTTSIDIWSAGCVLAELLLGQP 212 (353)
Q Consensus 140 kp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~-------~~~~~~~DiwSlG~il~~l~~g~~ 212 (353)
+|+|++++. +|.+.|+||+........... ...+..|.+||..... -.++.+.|.|+||+++|.|.+|..
T Consensus 172 ~~~nfll~~-~G~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLLDQ-DGGVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE-T-TS-EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEEcC-CCCEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 999999997 889999999987654332211 2335679999987432 236889999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCC
Q 018619 213 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 285 (353)
Q Consensus 213 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 285 (353)
||......... +. .|.. = .++|+.+++||+++|+.||.+|
T Consensus 249 Pf~~~~~~~~~-----------------------~~--------~f~~-C-~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADP-----------------------EW--------DFSR-C-RDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTS-----------------------GG--------GGTT-S-S---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCccccc-----------------------cc--------cchh-c-CCcCHHHHHHHHHHccCCcccC
Confidence 99765432110 00 0000 0 2589999999999999999988
No 415
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3.9e-24 Score=185.09 Aligned_cols=195 Identities=23% Similarity=0.328 Sum_probs=142.7
Q ss_pred CCCceeecceeeeecC----------------------CCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHH
Q 018619 62 DHPNVISLKHCFFSTT----------------------SKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTY 119 (353)
Q Consensus 62 ~h~~iv~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~ 119 (353)
+|||||.+...|.+.. -.....+|+||.....+|.+++.. ...+....+-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~-----~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT-----RHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc-----CCCchHHHHHHHH
Confidence 5999999987774321 122456899999999998888764 5567778888999
Q ss_pred HHHHHHHHhHcCCCeeeccCCCCcEEEeCC---CCcEEEeeeccccccccC-------CCcceeeeeceeeChhhhhCCC
Q 018619 120 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPL---THQVKICDFGSAKQLIAG-------EANISYICSRFYRAPELIFGAT 189 (353)
Q Consensus 120 qll~al~~LH~~~~i~H~Dlkp~Nill~~~---~~~vkl~Dfg~a~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~ 189 (353)
|+++|+.|||+ +||.|||+|.+|||+.-+ -..+.++|||+|--...- ......-|.-.-||||+....+
T Consensus 349 QlLEav~hL~~-hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 349 QLLEAVTHLHK-HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHHHH-ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999999 799999999999999422 236899999998532211 1112234566689999974432
Q ss_pred CC-----CccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCC
Q 018619 190 EY-----TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHK 264 (353)
Q Consensus 190 ~~-----~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
.. -.++|.|+.|.+.||++....||.+....-.-. .+|.+..+|. ++.
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~------------------r~Yqe~qLPa---------lp~ 480 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT------------------RTYQESQLPA---------LPS 480 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheech------------------hhhhhhhCCC---------Ccc
Confidence 21 237899999999999999999998854321110 1122223333 345
Q ss_pred CCChhHHHHHHHhcCcCCCCCCCHH
Q 018619 265 RMPPEAIDLASRLLQYSPSLRCTAL 289 (353)
Q Consensus 265 ~~~~~~~~li~~~L~~dp~~R~t~~ 289 (353)
.+++.+++++..+|+.||++|+++.
T Consensus 481 ~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 481 RVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred cCChHHHHHHHHHhcCCccccCCcc
Confidence 6899999999999999999999964
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=4.8e-24 Score=176.09 Aligned_cols=135 Identities=18% Similarity=0.222 Sum_probs=103.5
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-------------c-----------------hHHHHHHHHHcCCCc
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------------Y-----------------KNRELQLMRVMDHPN 65 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------~-----------------~~~E~~~l~~l~h~~ 65 (353)
...||+|++|.||+|.+. +|+.||+|++..... . ..+|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999986 899999999864321 1 124889999998777
Q ss_pred eeecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHh-HcCCCeeeccCCCCcE
Q 018619 66 VISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYI-HTVPRVCHRDLKPQNL 144 (353)
Q Consensus 66 iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~L-H~~~~i~H~Dlkp~Ni 144 (353)
+....... .. . .++||||++|+.+... ......+++..+..++.|++.+|.++ |+ .||+||||||+||
T Consensus 81 v~~p~~~~--~~---~--~~iVmE~i~g~~l~~~---~~~~~~~~~~~~~~i~~qi~~~L~~l~H~-~giiHrDlkP~NI 149 (190)
T cd05147 81 IPCPEPIL--LK---S--HVLVMEFIGDDGWAAP---RLKDAPLSESKARELYLQVIQIMRILYQD-CRLVHADLSEYNL 149 (190)
T ss_pred CCCCcEEE--ec---C--CEEEEEEeCCCCCcch---hhhcCCCCHHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHE
Confidence 64332211 11 1 3699999997532211 11346789999999999999999999 68 7999999999999
Q ss_pred EEeCCCCcEEEeeecccccc
Q 018619 145 LVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 145 ll~~~~~~vkl~Dfg~a~~~ 164 (353)
+++ ++.++|+|||+|...
T Consensus 150 li~--~~~v~LiDFG~a~~~ 167 (190)
T cd05147 150 LYH--DGKLYIIDVSQSVEH 167 (190)
T ss_pred EEE--CCcEEEEEccccccC
Confidence 998 367999999999754
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.90 E-value=2.8e-24 Score=206.26 Aligned_cols=241 Identities=28% Similarity=0.412 Sum_probs=172.0
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc--------chHHHHHHHHHcCCCceeecceeeeecCCCCcee
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (353)
+|...+.||++.|=+|.+|++. .| .|+||++.+... ...+|++ ....++||.+.+..+. .....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~-----~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL-----VTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH-----HhhHH
Confidence 6888999999999999999863 44 489998865431 1123444 5567899999876554 44445
Q ss_pred EEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 84 LNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 84 ~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
.|+|-+|+..+|++.+.. ..-+...+.+.|+.||+.||.-+|. .||+|||||.+||||.+ -+=+.|+||..-+.
T Consensus 96 AylvRqyvkhnLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~-~gVcHGDIKsENILiTS-WNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 96 AYLVRQYVKHNLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHK-LGVCHGDIKSENILITS-WNWLYLTDFASFKP 169 (1431)
T ss_pred HHHHHHHHhhhhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHH-cCccccccccceEEEee-echhhhhcccccCC
Confidence 779999999999888864 3557788888999999999999999 79999999999999997 44489999988765
Q ss_pred cccCCC---cceee-----eeceeeChhhhhCCC---------C-CCccccchhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 018619 164 LIAGEA---NISYI-----CSRFYRAPELIFGAT---------E-YTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLV 224 (353)
Q Consensus 164 ~~~~~~---~~~~~-----~t~~y~aPE~~~~~~---------~-~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~ 224 (353)
..-.+. ..++. .-.+|.|||.+.... . .+++-||||+||+++|+++ |++||.-. ++-
T Consensus 170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~ 245 (1431)
T KOG1240|consen 170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLL 245 (1431)
T ss_pred ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHH
Confidence 432221 11211 134699999874411 1 5678999999999999986 68998421 111
Q ss_pred HHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 225 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
..... +....+.+- .+--+..++.+|..|++.||++|.+|++.|+-
T Consensus 246 aYr~~-~~~~~e~~L-----------------------e~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 246 AYRSG-NADDPEQLL-----------------------EKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hHhcc-CccCHHHHH-----------------------HhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 11110 011111000 00114478999999999999999999999865
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=1.3e-23 Score=175.61 Aligned_cols=172 Identities=12% Similarity=0.110 Sum_probs=126.7
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc----cc---------hHHHHHHHHHcCCCceeecceeee
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RY---------KNRELQLMRVMDHPNVISLKHCFF 74 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~---------~~~E~~~l~~l~h~~iv~~~~~~~ 74 (353)
+..++|++.++||.|+||.||++.. ++..+|+|.+.... .. .++|+..+.++.||+|..+.+.+.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 3478999999999999999999765 57789999885321 11 457888999999999999988765
Q ss_pred ecCCC---CceeEEEEeccccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCC
Q 018619 75 STTSK---NELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLT 150 (353)
Q Consensus 75 ~~~~~---~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~ 150 (353)
..... .....+++|||++|. |.+. ..+++. ...+++.++..+|+ .|++|||+||+||++++ +
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~--------~~~~~~----~~~~i~~~l~~lH~-~gi~H~Dikp~Nili~~-~ 171 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDM--------PEISED----VKAKIKASIESLHQ-HGMVSGDPHKGNFIVSK-N 171 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHh--------hhccHH----HHHHHHHHHHHHHH-cCCccCCCChHHEEEeC-C
Confidence 43211 123478999999984 3322 122332 45699999999999 79999999999999996 6
Q ss_pred CcEEEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHH
Q 018619 151 HQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 208 (353)
Q Consensus 151 ~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~ 208 (353)
+ ++|+|||.+........... .... ..|+.++|+||||+++..+.
T Consensus 172 g-i~liDfg~~~~~~e~~a~d~-----------~vle-r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAKDR-----------IDLE-RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhHHH-----------HHHH-hHhcccccccceeEeehHHH
Confidence 6 99999998875432222111 2223 34678999999999887654
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=2.1e-22 Score=164.73 Aligned_cols=182 Identities=16% Similarity=0.096 Sum_probs=133.9
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc--------chHHHHHHHHHcC-CCceeecceeeeecCCCCceeE
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRVMD-HPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.+...|++|+||+|+++.. .+.+++.+.+..... .+.+|+++|+.++ ++++.++++.. . .
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~-----~----~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD-----G----R 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----C----E
Confidence 4678999999999997764 778888777754432 3568999999995 47788876631 1 5
Q ss_pred EEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccC-CCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDL-KPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dl-kp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+++|||+.|..+... .. .. ...++.|++.+|+++|+ +||+|||| ||+|||++. ++.++|+|||+|..
T Consensus 74 ~lvmeyI~G~~L~~~---~~------~~-~~~~~~qi~~~L~~lH~-~GIvHrDL~kp~NILv~~-~g~i~LIDFG~A~~ 141 (218)
T PRK12274 74 HLDRSYLAGAAMYQR---PP------RG-DLAYFRAARRLLQQLHR-CGVAHNDLAKEANWLVQE-DGSPAVIDFQLAVR 141 (218)
T ss_pred EEEEeeecCccHHhh---hh------hh-hHHHHHHHHHHHHHHHH-CcCccCCCCCcceEEEcC-CCCEEEEECCCcee
Confidence 799999998532211 10 01 13477899999999999 79999999 799999986 77899999999985
Q ss_pred cccCCCc--------------ceeeeeceeeChhhhhCCCCCC-ccccchhHHHHHHHHHhCCCCCCCCC
Q 018619 164 LIAGEAN--------------ISYICSRFYRAPELIFGATEYT-TSIDIWSAGCVLAELLLGQPLFPGEN 218 (353)
Q Consensus 164 ~~~~~~~--------------~~~~~t~~y~aPE~~~~~~~~~-~~~DiwSlG~il~~l~~g~~pf~~~~ 218 (353)
....... .-...++.|++|+...-....+ ...++++.|+-+|.++|+..++.+.+
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 5443311 0112477888888653332233 56788999999999999999886654
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=3e-22 Score=166.06 Aligned_cols=138 Identities=18% Similarity=0.191 Sum_probs=105.9
Q ss_pred EeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc------------------------------chHHHHHHHHHcCCC
Q 018619 15 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------------------------------YKNRELQLMRVMDHP 64 (353)
Q Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------------------------------~~~~E~~~l~~l~h~ 64 (353)
+.+.||+|++|.||+|.+. +|+.||||++..... ...+|...+..+.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 899999998864321 113678889999888
Q ss_pred ceeecceeeeecCCCCceeEEEEeccccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCc
Q 018619 65 NVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 143 (353)
Q Consensus 65 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~N 143 (353)
++........ . . .++||||++|. +..... ...+++...+..++.|++.++.++|+.+||+||||||+|
T Consensus 80 ~i~~p~~~~~--~-~----~~lVmE~~~g~~~~~~~l----~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~N 148 (190)
T cd05145 80 GVPVPEPILL--K-K----NVLVMEFIGDDGSPAPRL----KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYN 148 (190)
T ss_pred CCCCceEEEe--c-C----CEEEEEEecCCCchhhhh----hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhh
Confidence 8754433221 1 1 36999999975 222111 235678889999999999999999982399999999999
Q ss_pred EEEeCCCCcEEEeeecccccccc
Q 018619 144 LLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 144 ill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|+++ ++.++|+|||+|.....
T Consensus 149 Ill~--~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 149 ILYH--DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EEEE--CCCEEEEEcccceecCC
Confidence 9998 57799999999986543
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=7.3e-21 Score=185.53 Aligned_cols=195 Identities=22% Similarity=0.369 Sum_probs=148.3
Q ss_pred eeeecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHcC---CCceeecceeeeecCCCCc
Q 018619 6 CILQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-KNRELQLMRVMD---HPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~ 81 (353)
+-+.++.|.|.+.+|+|+||+||+|.+.. |+.||+|+-...... +.-=..++.+|+ -+.|..+..++...+.
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~--- 768 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA--- 768 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCc---
Confidence 34668899999999999999999999876 999999976443211 001122333444 2344444444322222
Q ss_pred eeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEe------CCCCcEE
Q 018619 82 LFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVD------PLTHQVK 154 (353)
Q Consensus 82 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~------~~~~~vk 154 (353)
-++|+||.+ |+|++++. .++.+++..+..+..|++.-++.||. .+|||+||||+|+||. .+..-++
T Consensus 769 --S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~-~~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 769 --SVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHA-MGIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred --ceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHh-cceecccCCcceeEeecccCCCCcccceE
Confidence 448999999 78777765 67889999999999999999999999 7999999999999993 2234599
Q ss_pred Eeeecccccccc---CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCC
Q 018619 155 ICDFGSAKQLIA---GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 212 (353)
Q Consensus 155 l~Dfg~a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~ 212 (353)
|+|||.+..+.- +.......+|-.+-.+|...|. .+++.+|.|+++.+++.|+.|+.
T Consensus 842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr-pWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR-PWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCC-CCchhhhhHHHHHHHHHHHHHHH
Confidence 999999976543 3334556778899999999775 49999999999999999999973
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.85 E-value=2e-20 Score=155.88 Aligned_cols=136 Identities=18% Similarity=0.240 Sum_probs=102.0
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc----ccchHHHHHHHHHc-----CCCceeecceeeeecCCCCceeE
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRVM-----DHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
.-.+.||+|++|.||. +..++.. +||++... .....+|+.+++.+ +||||+++++++.+... ....+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g-~g~v~ 80 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG-TGYVY 80 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC-CeEEE
Confidence 3457899999999995 7777666 69987643 34567899999999 67999999998854321 12224
Q ss_pred EEEecccc---chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHH-HHhHcCCCeeeccCCCCcEEEeC---CCCcEEEee
Q 018619 85 NLVMEYVP---ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGL-AYIHTVPRVCHRDLKPQNLLVDP---LTHQVKICD 157 (353)
Q Consensus 85 ~lv~e~~~---~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al-~~LH~~~~i~H~Dlkp~Nill~~---~~~~vkl~D 157 (353)
.+|+||++ ++|.+.+.. ..+++. ..++.|++.++ +|||+ ++|+||||||+|||++. .+..++|+|
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~-~~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLD-NRIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 47899955 577777753 345555 35678888888 99999 79999999999999974 234799999
Q ss_pred eccc
Q 018619 158 FGSA 161 (353)
Q Consensus 158 fg~a 161 (353)
|+.+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 5444
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.84 E-value=1.1e-20 Score=161.36 Aligned_cols=139 Identities=16% Similarity=0.113 Sum_probs=105.8
Q ss_pred eeeEeeeeecCCCeEEEEEE-ECCCCcEEEEEEeeccc----------------------------cchHHHHHHHHHcC
Q 018619 12 SYMAERVVGTGSFGIVFQAK-CLETGETVAIKKVLQDR----------------------------RYKNRELQLMRVMD 62 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~----------------------------~~~~~E~~~l~~l~ 62 (353)
-|.+.+.||+|++|.||+|. +..+|+.||+|++.... ....+|+.++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999998 77899999999886431 11347899999887
Q ss_pred CCceeecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCC-eeeccCCC
Q 018619 63 HPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPR-VCHRDLKP 141 (353)
Q Consensus 63 h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~-i~H~Dlkp 141 (353)
+. .+.+..++.. . ..++||||++|...... ......+....+..++.|++.++++||+ +| ++||||||
T Consensus 109 ~~-~i~~p~~~~~-~-----~~~lV~E~~~g~~L~~~---~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~g~iiH~Dikp 177 (237)
T smart00090 109 EA-GVPVPKPIAW-R-----RNVLVMEFIGGDGLPAP---RLKDVEPEEEEEFELYDDILEEMRKLYK-EGELVHGDLSE 177 (237)
T ss_pred hc-CCCCCeeeEe-c-----CceEEEEEecCCccccc---ccccCCcchHHHHHHHHHHHHHHHHHHh-cCCEEeCCCCh
Confidence 53 2333333311 1 14699999998532211 1123456677778999999999999999 79 99999999
Q ss_pred CcEEEeCCCCcEEEeeeccccc
Q 018619 142 QNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 142 ~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+||+++ ++.++|+|||.|..
T Consensus 178 ~NIli~--~~~i~LiDFg~a~~ 197 (237)
T smart00090 178 YNILVH--DGKVVIIDVSQSVE 197 (237)
T ss_pred hhEEEE--CCCEEEEEChhhhc
Confidence 999998 56799999999874
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=4.8e-21 Score=158.32 Aligned_cols=238 Identities=18% Similarity=0.253 Sum_probs=173.7
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
+..+..+|.+...|..|+++.. |..++.|++.-. .+.+..|.-.|+.+.||||+.+.+.+- ....+.
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn-----sppnlv 263 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN-----SPPNLV 263 (448)
T ss_pred hhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-----CCCCce
Confidence 4456678888999999999874 444555655322 345567888899999999999998883 334477
Q ss_pred EEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeec-cCCCCcEEEeCCCCcEEE--eeeccc
Q 018619 86 LVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHR-DLKPQNLLVDPLTHQVKI--CDFGSA 161 (353)
Q Consensus 86 lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~-Dlkp~Nill~~~~~~vkl--~Dfg~a 161 (353)
++..||+ |+|+..+... .+-..+-.++.+++..+++|++|||+...++-| -|....+++|+ +.+.+| +|--++
T Consensus 264 ~isq~mp~gslynvlhe~--t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmide-dltarismad~kfs 340 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQ--TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDE-DLTARISMADTKFS 340 (448)
T ss_pred EeeeeccchHHHHHHhcC--ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecc-hhhhheecccceee
Confidence 9999999 7888888752 334467788999999999999999996555544 57888899985 655554 333222
Q ss_pred cccccCCCcceeeeeceeeChhhhhCCCCC--CccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Q 018619 162 KQLIAGEANISYICSRFYRAPELIFGATEY--TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 239 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~--~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
. ........|.|+|||.+...+.- -.++|+|||++++||+.|...||....+.+.--++.-
T Consensus 341 f------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial----------- 403 (448)
T KOG0195|consen 341 F------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL----------- 403 (448)
T ss_pred e------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-----------
Confidence 2 11223447889999999654322 3579999999999999999999988777655433221
Q ss_pred hcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 240 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
+-....++..++.....|++-|+..||.+||..+.++
T Consensus 404 ----------------eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 404 ----------------EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ----------------ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 1112234567899999999999999999999887764
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.80 E-value=2.4e-20 Score=167.61 Aligned_cols=179 Identities=28% Similarity=0.443 Sum_probs=131.4
Q ss_pred ceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeec
Q 018619 81 ELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFG 159 (353)
Q Consensus 81 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg 159 (353)
..++||.|++|.. +|.+.+.. .......+......++.|+..|++| ++.+|+|+||.||+... +..+||+|||
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~r-r~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~-d~q~kIgDFg 401 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRR-RRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSD-DDQLKIGDFG 401 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhC-CCcccccchhHHHHHHHhhccchhh----ccchhhhcccccccccc-chhhhhhhhh
Confidence 3468899999994 55555543 3445667888899999999999999 49999999999999985 6789999999
Q ss_pred cccccccCC-------CcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhC
Q 018619 160 SAKQLIAGE-------ANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLG 231 (353)
Q Consensus 160 ~a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g-~~pf~~~~~~~~~~~~~~~~~ 231 (353)
+........ ..+..+||.+||+||.+.+.. |+.++||||||+||+|++.- ...|.. .....
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~-y~~kvdIyaLGlil~EL~~~f~T~~er------~~t~~---- 470 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ-YSEKVDIYALGLILAELLIQFSTQFER------IATLT---- 470 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhh-hhhhcchhhHHHHHHHHHHHhccHHHH------HHhhh----
Confidence 998776655 456678999999999998765 99999999999999999962 222211 10000
Q ss_pred CCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccc
Q 018619 232 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 297 (353)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f 297 (353)
.+....|...+..+ -++-.+|+.+||...|.+||++.+.--|+|.
T Consensus 471 --------------------d~r~g~ip~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 471 --------------------DIRDGIIPPEFLQD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred --------------------hhhcCCCChHHhhc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 00111111111111 2345689999999999999988877777764
No 426
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.80 E-value=2.3e-19 Score=164.11 Aligned_cols=203 Identities=27% Similarity=0.409 Sum_probs=149.3
Q ss_pred HHHcCCCceeecceeeeecCCCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCe-e
Q 018619 58 MRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRV-C 135 (353)
Q Consensus 58 l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i-~ 135 (353)
|+.+.|.|+.++++..+.. ...++|.+||. |+|.+.+.. ....+++.....+++.++.||+|+|. ..| .
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~-s~i~~ 71 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHN-SPIGY 71 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhc-Cccee
Confidence 3567899999999998665 33779999999 777777764 56778899999999999999999999 455 9
Q ss_pred eccCCCCcEEEeCCCCcEEEeeeccccccccC---CCcceeeeeceeeChhhhhCCCC------CCccccchhHHHHHHH
Q 018619 136 HRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG---EANISYICSRFYRAPELIFGATE------YTTSIDIWSAGCVLAE 206 (353)
Q Consensus 136 H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~------~~~~~DiwSlG~il~~ 206 (353)
|+.++..|+++|. ...+||+|||+....... ...........|.|||++.+... .+.+.|+||+|++++|
T Consensus 72 hg~l~s~nClvd~-~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~e 150 (484)
T KOG1023|consen 72 HGALKSSNCLVDS-RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYE 150 (484)
T ss_pred eeeeccccceeee-eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHH
Confidence 9999999999996 899999999998755321 11111223456999999966311 3667999999999999
Q ss_pred HHhCCCCCCCCChH----HHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCC
Q 018619 207 LLLGQPLFPGENAV----DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP 282 (353)
Q Consensus 207 l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp 282 (353)
+++.+.||...... +.+..+.+....+....+.. . ..+.+++..++++||..+|
T Consensus 151 i~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~---------------------~-~e~~~~l~~l~~~cw~e~P 208 (484)
T KOG1023|consen 151 ILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIEL---------------------L-NELPPELLLLVARCWEEIP 208 (484)
T ss_pred HHhccCccccccccCChHHHHHHHHhcCCCCcCcchhh---------------------h-hhcchHHHHHHHHhcccCh
Confidence 99999999763322 23333222011111111100 0 1245689999999999999
Q ss_pred CCCCCHHHHh
Q 018619 283 SLRCTALEAC 292 (353)
Q Consensus 283 ~~R~t~~~~l 292 (353)
.+||+++++-
T Consensus 209 ~~rPs~~~i~ 218 (484)
T KOG1023|consen 209 EKRPSIEQIR 218 (484)
T ss_pred hhCccHHHHH
Confidence 9999998873
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=3.3e-21 Score=183.97 Aligned_cols=256 Identities=24% Similarity=0.326 Sum_probs=192.5
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCC-CcEEEEEEeeccc------cchHHHHHHHHHcC-CCceeecceeeeecCCCCc
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLET-GETVAIKKVLQDR------RYKNRELQLMRVMD-HPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~------~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 81 (353)
...|.+.+.||+|+++.|-++....+ ...+|.|.+.... .....|..+-+.+. |+|+++.++.. ...
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~-----~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS-----SSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc-----CCC
Confidence 45788999999999999988876443 3456666554322 12234777777776 99999998877 455
Q ss_pred eeEEEEeccccch-HHHHHHhhhhcCC-CCCHHHHHHHHHHHHHHHHHhH-cCCCeeeccCCCCcEEEeCCCC-cEEEee
Q 018619 82 LFLNLVMEYVPES-MYRVLKHYSSANQ-RMPLIYVKLYTYQIFRGLAYIH-TVPRVCHRDLKPQNLLVDPLTH-QVKICD 157 (353)
Q Consensus 82 ~~~~lv~e~~~~~-l~~~l~~~~~~~~-~l~~~~~~~i~~qll~al~~LH-~~~~i~H~Dlkp~Nill~~~~~-~vkl~D 157 (353)
.+.+++++|..|+ +..... ..+. ..+...+..++.|+..++.|+| . .++.|+|+||+|.+++. .+ .++++|
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~---~~~~~~~~~~~~~~~~~ql~s~l~~~H~~-~~~~h~~ikP~n~~l~~-s~~~l~~~d 168 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKIS---HPDSTGTSSSSASRYLPQLNSGLSYLHPE-NGVTHRDIKPSNSLLDE-SGSALKIAD 168 (601)
T ss_pred cccccccCcccccccccccc---cCCccCCCCcchhhhhhhhccCccccCcc-cccccCCCCCccchhcc-CCCcccCCC
Confidence 5588999997764 222221 2333 6777888999999999999999 8 89999999999999996 66 899999
Q ss_pred ecccccccc-CCCc---ceeee-eceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Q 018619 158 FGSAKQLIA-GEAN---ISYIC-SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 232 (353)
Q Consensus 158 fg~a~~~~~-~~~~---~~~~~-t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 232 (353)
||+|..... .+.. ...+| ++.|.|||...+....+...|+||+|+++..|++|..|+......+....
T Consensus 169 f~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~------- 241 (601)
T KOG0590|consen 169 FGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS------- 241 (601)
T ss_pred chhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce-------
Confidence 999987765 3322 34567 99999999997766678899999999999999999999976554331100
Q ss_pred CCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 233 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
.+.... ........+.++..+.+++.++|..+|..|.+..++-.+||+..
T Consensus 242 ----------------~~~~~~-~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 242 ----------------SWKSNK-GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ----------------eecccc-cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 000000 11112233568999999999999999999999999999999988
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.76 E-value=2.6e-18 Score=143.50 Aligned_cols=134 Identities=19% Similarity=0.142 Sum_probs=100.5
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccc--------------------------cchHHHHHHHHHcCCCc
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------------------------RYKNRELQLMRVMDHPN 65 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------------------~~~~~E~~~l~~l~h~~ 65 (353)
.|.+.+.||+|++|.||++.. .+|+.||||++.... ....+|..++..+.+++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 488999999999999999986 489999999865321 11346788888887764
Q ss_pred e--eecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCc
Q 018619 66 V--ISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 143 (353)
Q Consensus 66 i--v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~N 143 (353)
+ ...++ . ...++||||++|.....+.. ......++.+++.++.++|+ .|++|+||||+|
T Consensus 95 i~v~~~~~----~-----~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~-~gi~H~Dl~p~N 155 (198)
T cd05144 95 FPVPKPID----W-----NRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYK-HGIIHGDLSEFN 155 (198)
T ss_pred CCCCceee----c-----CCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHH-CCCCcCCCCccc
Confidence 3 22221 1 12479999999753222211 03356788999999999999 799999999999
Q ss_pred EEEeCCCCcEEEeeecccccccc
Q 018619 144 LLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 144 ill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|+++. ++.++|+|||.+.....
T Consensus 156 ill~~-~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 156 ILVDD-DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred EEEcC-CCcEEEEECCccccCCC
Confidence 99996 78999999999965433
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=8.3e-18 Score=142.04 Aligned_cols=129 Identities=20% Similarity=0.314 Sum_probs=100.7
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc------------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
+.||+|++|.||++.. .|..+++|+..... ....+|+.++..+.|+++.....++.... ..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE-----NF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC-----CC
Confidence 5799999999999986 77889999764221 12347899999999988876655553322 26
Q ss_pred EEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+++|||++| +|.+.+.. .. . ....++.+++.+|.++|+ .|++|+|++|.||+++ ++.++|+|||.+..
T Consensus 75 ~lv~e~~~G~~L~~~~~~----~~---~-~~~~i~~~i~~~l~~lH~-~~i~H~Dl~p~Nil~~--~~~~~liDf~~a~~ 143 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINS----NG---M-EELELSREIGRLVGKLHS-AGIIHGDLTTSNMILS--GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEEEeCCcCHHHHHHh----cc---H-HHHHHHHHHHHHHHHHHh-CCcccCCCCcccEEEE--CCCEEEEECCcccC
Confidence 799999986 55555432 11 1 678899999999999999 7999999999999998 56799999999874
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=3.3e-17 Score=137.04 Aligned_cols=125 Identities=20% Similarity=0.307 Sum_probs=93.5
Q ss_pred eeecCCCeEEEEEEECCCCcEEEEEEeeccc------------cchHHHHHHHHHcCCCceeecceeeeecCCCCceeEE
Q 018619 18 VVGTGSFGIVFQAKCLETGETVAIKKVLQDR------------RYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLN 85 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 85 (353)
.||+|++|.||++.. ++..+++|...... ....+|+.+++.+.|+++......+.... ..+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD-----NKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC-----CCE
Confidence 479999999999984 67889999864321 22346999999998877554433332221 256
Q ss_pred EEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 86 LVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 86 lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++|||++| ++.+.+.. ... .++.|++.+|.+||+ .|++|+|++|.||+++ ++.++++|||++..
T Consensus 74 lv~e~~~g~~l~~~~~~----~~~-------~~~~~i~~~l~~lH~-~gi~H~Dl~~~Nil~~--~~~~~liDfg~a~~ 138 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEE----GND-------ELLREIGRLVGKLHK-AGIVHGDLTTSNIIVR--DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEEECCccHHHHHhh----cHH-------HHHHHHHHHHHHHHH-CCeecCCCCcceEEEE--CCcEEEEECCCCcC
Confidence 99999986 44443322 110 678899999999999 7999999999999998 57799999999875
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=1.1e-16 Score=153.41 Aligned_cols=130 Identities=20% Similarity=0.282 Sum_probs=97.5
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEee-cc-----------ccchHHHHHHHHHcCCCceeecceeeeecCCC
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVL-QD-----------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSK 79 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~-----------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (353)
.|...+.||+|+||+||++... +..+++|+.. +. .....+|+.+++.++|++++..........
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-- 409 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE-- 409 (535)
T ss_pred ccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC--
Confidence 4456889999999999998864 3344444321 11 123457999999999999887655443221
Q ss_pred CceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 80 NELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 80 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
..++||||++| +|.+.+. ....++.|++.+|.+||+ .|++||||||+||+++ ++.++|+||
T Consensus 410 ---~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~-~giiHrDlkp~NILl~--~~~~~liDF 471 (535)
T PRK09605 410 ---EKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHK-AGIVHGDLTTSNFIVR--DDRLYLIDF 471 (535)
T ss_pred ---CCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHh-CCCccCCCChHHEEEE--CCcEEEEeC
Confidence 25699999986 4444432 246688999999999999 7999999999999995 567999999
Q ss_pred ccccc
Q 018619 159 GSAKQ 163 (353)
Q Consensus 159 g~a~~ 163 (353)
|+++.
T Consensus 472 Gla~~ 476 (535)
T PRK09605 472 GLGKY 476 (535)
T ss_pred ccccc
Confidence 99974
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.69 E-value=1.5e-16 Score=131.79 Aligned_cols=133 Identities=24% Similarity=0.186 Sum_probs=91.3
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeeccccch----------------------------HHHHHHHHHcCCCc--
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK----------------------------NRELQLMRVMDHPN-- 65 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~E~~~l~~l~h~~-- 65 (353)
.+.||+|+||+||+|.+. +++.||||++....... ..|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 568999999999999976 89999999876432111 13444444443322
Q ss_pred eeecceeeeecCCCCceeEEEEeccccchH-H-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCc
Q 018619 66 VISLKHCFFSTTSKNELFLNLVMEYVPESM-Y-RVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 143 (353)
Q Consensus 66 iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l-~-~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~N 143 (353)
+.+.+.+ . ..++||||++++. . ..+.... .. ..++.++.+++.++.++|+..||+|+||||+|
T Consensus 81 ~~~~~~~----~-----~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~N 145 (187)
T cd05119 81 VPKPIDL----N-----RHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYN 145 (187)
T ss_pred CCceEec----C-----CCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhh
Confidence 2222111 1 1579999999721 1 1121110 11 56788999999999999983499999999999
Q ss_pred EEEeCCCCcEEEeeecccccccc
Q 018619 144 LLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 144 ill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
|+++ ++.++|+|||.+.....
T Consensus 146 ili~--~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 146 ILVD--DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred EEEE--CCcEEEEECcccccccC
Confidence 9999 67799999999975433
No 433
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=3.2e-17 Score=150.23 Aligned_cols=250 Identities=25% Similarity=0.278 Sum_probs=190.5
Q ss_pred cceeeEeeeeec--CCCeEEEEEEE--CCCCcEEEEEEee------ccccchHHHHHHHHHcC-CCceeecceeeeecCC
Q 018619 10 TISYMAERVVGT--GSFGIVFQAKC--LETGETVAIKKVL------QDRRYKNRELQLMRVMD-HPNVISLKHCFFSTTS 78 (353)
Q Consensus 10 ~~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vaiK~~~------~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 78 (353)
...+.+.+.+|. |.+|.||.+.+ ..++..+|+|.-. .+.....+|+.-.+.++ |++.++.+..+
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~----- 187 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW----- 187 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-----
Confidence 345567788999 99999999999 8899999999642 22333346777666664 88999866666
Q ss_pred CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHH----HHHHhHcCCCeeeccCCCCcEEEeCCCCcEE
Q 018619 79 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFR----GLAYIHTVPRVCHRDLKPQNLLVDPLTHQVK 154 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~----al~~LH~~~~i~H~Dlkp~Nill~~~~~~vk 154 (353)
.+....++-+|+|+.++...... ....++...++..+.+... ||.++|+ ++++|-|+||.||+..++....+
T Consensus 188 e~~~~lfiqtE~~~~sl~~~~~~---~~~~~p~~~l~~~~~~~~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~s~~ 263 (524)
T KOG0601|consen 188 EGSGILFIQTELCGESLQSYCHT---PCNFLPDNLLWNSLRDWLSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWTSCK 263 (524)
T ss_pred ccCCcceeeeccccchhHHhhhc---ccccCCchhhhhHHhhhhhcccccccccCC-Ccccccccchhheecccccceee
Confidence 55556889999999765554432 4455888999999999999 9999999 89999999999999987337899
Q ss_pred EeeeccccccccCCCcce------eeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCC--ChHHHHHHH
Q 018619 155 ICDFGSAKQLIAGEANIS------YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE--NAVDQLVEI 226 (353)
Q Consensus 155 l~Dfg~a~~~~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~--~~~~~~~~~ 226 (353)
++|||+...+.+...... ..+...|++||+..+ -++..+|++|+|.++.+-.+|..++... +.+..+...
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 999999998877653322 145667999999855 4799999999999999999887665443 322221110
Q ss_pred HHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 227 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
. ...++-...+.++...+..|++.||..|++++.+.+|+++...
T Consensus 342 ~------------------------------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 342 Y------------------------------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred c------------------------------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 0 1112223567778889999999999999999999999999754
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.67 E-value=1e-15 Score=131.08 Aligned_cols=133 Identities=18% Similarity=0.228 Sum_probs=95.6
Q ss_pred eeee-cCCCeEEEEEEECCCCcEEEEEEeecc-----------------ccchHHHHHHHHHcCCCce--eecceeeeec
Q 018619 17 RVVG-TGSFGIVFQAKCLETGETVAIKKVLQD-----------------RRYKNRELQLMRVMDHPNV--ISLKHCFFST 76 (353)
Q Consensus 17 ~~lg-~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------------~~~~~~E~~~l~~l~h~~i--v~~~~~~~~~ 76 (353)
..|| .|+.|+||.+.. .+..+++|.+... .....+|+.++..++|+++ +..++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 788889998876 4778999977421 1224579999999998775 4444433221
Q ss_pred CCCCceeEEEEeccccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEE
Q 018619 77 TSKNELFLNLVMEYVPE--SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVK 154 (353)
Q Consensus 77 ~~~~~~~~~lv~e~~~~--~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vk 154 (353)
.......++|||+++| +|.+.+.. .++++.. +.|++.+|.+||+ +||+|+||||+|||++. ++.++
T Consensus 115 -~~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~~----~~~i~~~l~~lH~-~GI~HrDlkp~NILv~~-~~~v~ 182 (239)
T PRK01723 115 -HGLFYRADILIERIEGARDLVALLQE-----APLSEEQ----WQAIGQLIARFHD-AGVYHADLNAHNILLDP-DGKFW 182 (239)
T ss_pred -cCcceeeeEEEEecCCCCCHHHHHhc-----CCCCHHH----HHHHHHHHHHHHH-CCCCCCCCCchhEEEcC-CCCEE
Confidence 1111123599999996 55555432 3455543 5689999999999 79999999999999996 66899
Q ss_pred Eeeeccccc
Q 018619 155 ICDFGSAKQ 163 (353)
Q Consensus 155 l~Dfg~a~~ 163 (353)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999999874
No 435
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=7.5e-17 Score=155.45 Aligned_cols=268 Identities=25% Similarity=0.308 Sum_probs=193.6
Q ss_pred cceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeec-------cccchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
.+.+.+.+-+.+|+++.++.++-..+|-..++|.... +.+...++-.++....+|.++...-.+ .-..
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~rs 877 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PCRS 877 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CCCC
Confidence 4566777889999999999998877886666664432 222223344444444567666543332 2223
Q ss_pred eEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 83 FLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 83 ~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+++++|.++ ++...+. ..+..+.+-++.++..+..++++||+ ..+.|+|++|.|++... ++..++.|||..
T Consensus 878 P~~L~~~~~~~~~~~Skl~----~~~~~saepaRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~-~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLH----NSGCLSAEPARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAY-DGHRPLTDFGTL 951 (1205)
T ss_pred CcchhhHHhccCCchhhhh----cCCCcccccccchhHHHHhhhhcccc-chhhcccccccchhhcc-cCCcccCccccc
Confidence 37799999975 5544443 34567778888899999999999999 57999999999999985 788999999843
Q ss_pred ccccc------C--------------------------CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHh
Q 018619 162 KQLIA------G--------------------------EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL 209 (353)
Q Consensus 162 ~~~~~------~--------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~ 209 (353)
..... . .......+|+.|.+||...+.. .+.++|+|+.|+.+++.++
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~ 1030 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLT 1030 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhc
Confidence 32110 0 0012346799999999997765 7889999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHH
Q 018619 210 GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 289 (353)
Q Consensus 210 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~ 289 (353)
|.+||...........+.+... +|.. -+...+.++++++.++|..+|.+|..+.
T Consensus 1031 g~pp~na~tpq~~f~ni~~~~~-------------------------~~p~-g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1031 GIPPFNAETPQQIFENILNRDI-------------------------PWPE-GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCCCcchhhhhhccccCCC-------------------------CCCC-CccccChhhhhhhhhhhccCchhccCcc
Confidence 9999999888777655544211 1111 1234788999999999999999999887
Q ss_pred ---HHhcCcccccccCCCCCCCCCCCCCC
Q 018619 290 ---EACAHPFFDELREPNARLPNGRPLPP 315 (353)
Q Consensus 290 ---~~l~hp~f~~~~~~~~~~~~~~~~~~ 315 (353)
++-.||||+...+.+........+|.
T Consensus 1085 ~~~e~k~~~~~~~~~~~~l~~q~~~~~p~ 1113 (1205)
T KOG0606|consen 1085 GAAEVKGHPFFQDVDWENLALQKAEFVPQ 1113 (1205)
T ss_pred cccccccCCccCCCCccccccccCccCCC
Confidence 89999999998887665544444443
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=2.5e-15 Score=119.56 Aligned_cols=131 Identities=20% Similarity=0.247 Sum_probs=101.8
Q ss_pred EeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHcCC--CceeecceeeeecCCCCceeEEEEecc
Q 018619 15 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--YKNRELQLMRVMDH--PNVISLKHCFFSTTSKNELFLNLVMEY 90 (353)
Q Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~~~~~lv~e~ 90 (353)
+++.||+|.++.||++... +..+++|....... ...+|+.+++.+++ .++.+++..+ ......+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEEEe
Confidence 4678999999999999974 37899998866543 56789999999976 4777776554 222347899999
Q ss_pred ccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC--CCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 91 VPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTV--PRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 91 ~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~--~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
+.|..... ++......++.+++.+++.+|.. .+++|+|++|+||++++ .+.++++|||.+..
T Consensus 75 ~~g~~~~~----------~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~-~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDE----------VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD-GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeeccc----------CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC-CcEEEEEecccccC
Confidence 98752211 14455677889999999999983 26999999999999996 78899999999863
No 437
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.52 E-value=3.2e-13 Score=125.54 Aligned_cols=165 Identities=23% Similarity=0.308 Sum_probs=121.6
Q ss_pred EEECCCCcEEEEEEeecccc----chHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhc
Q 018619 30 AKCLETGETVAIKKVLQDRR----YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSA 105 (353)
Q Consensus 30 ~~~~~~~~~vaiK~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~ 105 (353)
+..+.++.+|.+........ ...+-++-|+.++||||+++++.+ +.....|+|+|.+.. |...+..
T Consensus 31 ~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~-----e~~~~~ylvTErV~P-l~~~lk~---- 100 (690)
T KOG1243|consen 31 GTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTT-----EEEGTLYLVTERVRP-LETVLKE---- 100 (690)
T ss_pred cceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhh-----cccCceEEEeecccc-HHHHHHH----
Confidence 45567888888887754433 245677889999999999999887 444468999999873 2234443
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCC-cceeeeeceeeChhh
Q 018619 106 NQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA-NISYICSRFYRAPEL 184 (353)
Q Consensus 106 ~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~ 184 (353)
+....+..-+.||+.||.|||.-.+++|++|..+.|+|+. .|..||++|.++........ .....---.|..|+.
T Consensus 101 ---l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~-~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~ 176 (690)
T KOG1243|consen 101 ---LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNE-SGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEE 176 (690)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcC-CCcEEEeeeEEEeccccCCcccccchhhhcccChhh
Confidence 3367778889999999999985379999999999999996 88999999999865443322 111111223677776
Q ss_pred hhCCCCCCccccchhHHHHHHHHHhCC
Q 018619 185 IFGATEYTTSIDIWSAGCVLAELLLGQ 211 (353)
Q Consensus 185 ~~~~~~~~~~~DiwSlG~il~~l~~g~ 211 (353)
+.. -.-..|.|.|||++++++.|.
T Consensus 177 ~~~---s~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 177 IDP---SEWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cCc---cccchhhhhHHHHHHHHhCcc
Confidence 521 224679999999999999993
No 438
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.50 E-value=2.8e-14 Score=121.58 Aligned_cols=211 Identities=18% Similarity=0.194 Sum_probs=145.3
Q ss_pred HHHHHcCCCceeecceeeeecCCCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC-CC
Q 018619 56 QLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTV-PR 133 (353)
Q Consensus 56 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~-~~ 133 (353)
.-+-.+-|.|+|+++.++.+....+.....+++||+. |++...|+.-......+....-.+|+.||+.||.|||+. .-
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3445567999999999886655555666789999998 788888877777778888888899999999999999994 35
Q ss_pred eeeccCCCCcEEEeCCCCcEEEeeeccccccccC-----CCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHH
Q 018619 134 VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAG-----EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELL 208 (353)
Q Consensus 134 i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~ 208 (353)
|+|+++..+-|++.. ++-+|++--.-......- .......+-+.|.+||.=. ....+.++|||++|.-..+|.
T Consensus 199 iihgnlTc~tifiq~-ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~-~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQH-NGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGT-TTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred cccCCcchhheeecC-CceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCc-ccccccchhhhhhhHHHHHHH
Confidence 999999999999995 776776432211111000 0111234567789998632 223577899999999999999
Q ss_pred hCCCC-CCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC
Q 018619 209 LGQPL-FPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 287 (353)
Q Consensus 209 ~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t 287 (353)
.|..- -.+......-..+.+. +...-...-++++++||+-.|+.||+
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~--------------------------------i~~len~lqr~~i~kcl~~eP~~rp~ 324 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANV--------------------------------IIGLENGLQRGSITKCLEGEPNGRPD 324 (458)
T ss_pred HheeccCCCcceeehhhhhhhh--------------------------------eeeccCccccCcCcccccCCCCCCcc
Confidence 87643 2222111111111110 00001223357899999999999999
Q ss_pred HHHHhcCcccccc
Q 018619 288 ALEACAHPFFDEL 300 (353)
Q Consensus 288 ~~~~l~hp~f~~~ 300 (353)
+.+++.||..-++
T Consensus 325 ar~llfHpllfeV 337 (458)
T KOG1266|consen 325 ARLLLFHPLLFEV 337 (458)
T ss_pred hhhhhcCceeeec
Confidence 9999999997543
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.48 E-value=2e-13 Score=128.43 Aligned_cols=141 Identities=18% Similarity=0.226 Sum_probs=90.9
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecccc------------------------------------------
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------------------------------------------ 49 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------------------------------------------ 49 (353)
.|.. +.||+|++|.||.|+.+.+|+.||||+......
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 3444 689999999999999988899999998853310
Q ss_pred --chHHHHHHHHHc----CCCceeecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcC---CCCCHHHHHHHHHH
Q 018619 50 --YKNRELQLMRVM----DHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSAN---QRMPLIYVKLYTYQ 120 (353)
Q Consensus 50 --~~~~E~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~---~~l~~~~~~~i~~q 120 (353)
...+|+..+.++ .+.+.+.+-.++.+.++ .-++||||+.|.-...+......+ ..+.+..+..++.|
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st----~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCS----ETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCC----CceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 001233333332 23344444444433222 255999999974222222111111 13555566666666
Q ss_pred HHHHHHHhHcCCCeeeccCCCCcEEEeCCCC----cEEEeeecccccccc
Q 018619 121 IFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH----QVKICDFGSAKQLIA 166 (353)
Q Consensus 121 ll~al~~LH~~~~i~H~Dlkp~Nill~~~~~----~vkl~Dfg~a~~~~~ 166 (353)
++ . .|++|+|+||.||+++. ++ +++++|||++...+.
T Consensus 276 if-------~-~GffHaDpHPGNIlv~~-~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 VF-------R-DGFFHADMHPGNIFVSY-DPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HH-------h-CCeeeCCCChHHeEEec-CCCCCCeEEEEecceEEECCH
Confidence 65 4 69999999999999986 55 899999999986644
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.45 E-value=9.2e-13 Score=108.00 Aligned_cols=134 Identities=19% Similarity=0.223 Sum_probs=93.7
Q ss_pred eeeeecCCCeEEEEEEECC------CCcEEEEEEeecc--------------cc------------c----hHHHHHHHH
Q 018619 16 ERVVGTGSFGIVFQAKCLE------TGETVAIKKVLQD--------------RR------------Y----KNRELQLMR 59 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~--------------~~------------~----~~~E~~~l~ 59 (353)
...||.|-=+.||.|.... .+..+|||+.... .+ . .++|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998543 3578999977311 00 1 126888888
Q ss_pred HcCCC--ceeecceeeeecCCCCceeEEEEeccccch-HH-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHh-HcCCCe
Q 018619 60 VMDHP--NVISLKHCFFSTTSKNELFLNLVMEYVPES-MY-RVLKHYSSANQRMPLIYVKLYTYQIFRGLAYI-HTVPRV 134 (353)
Q Consensus 60 ~l~h~--~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~-~~l~~~~~~~~~l~~~~~~~i~~qll~al~~L-H~~~~i 134 (353)
++... ++...+.+ . . -++||||++++ +. ..+. +..++......+..+++.+|..| |+ .|+
T Consensus 82 rl~~~Gv~vP~pi~~----~-~----~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~-~gl 146 (197)
T cd05146 82 RMQKAGIPCPEVVVL----K-K----HVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKE-CNL 146 (197)
T ss_pred HHHHcCCCCCeEEEe----c-C----CEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHh-CCe
Confidence 87432 33333322 1 1 45999999863 11 1121 23455566777889999999999 88 799
Q ss_pred eeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 135 CHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 135 ~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
+|+||++.||+++ ++.+.|+|||.|.....
T Consensus 147 VHGDLs~~NIL~~--~~~v~iIDF~qav~~~h 176 (197)
T cd05146 147 VHADLSEYNMLWH--DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred ecCCCCHHHEEEE--CCcEEEEECCCceeCCC
Confidence 9999999999997 45699999999876543
No 441
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.45 E-value=7.1e-13 Score=123.20 Aligned_cols=137 Identities=20% Similarity=0.252 Sum_probs=88.3
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeeccc-cc-------------------------------------------h
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-RY-------------------------------------------K 51 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~-------------------------------------------~ 51 (353)
.+.||+|++|.||+|+. .+|+.||||+..... .. .
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 35799999999999985 589999999874321 00 1
Q ss_pred HHHHHHHHHc----CCCceeecceeeeecCCCCceeEEEEeccccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHH-HH
Q 018619 52 NRELQLMRVM----DHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRVLKHYSSANQRMPLIYVKLYTYQIFR-GL 125 (353)
Q Consensus 52 ~~E~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~l~~~~~~~i~~qll~-al 125 (353)
.+|+..+..+ ++.+-+.+-.++...++ ..++||||++|. +.+.... .. .... ...++.+++. .+
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~----~~vLvmE~i~G~~L~~~~~~-~~--~~~~---~~~ia~~~~~~~l 270 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTS----ERVLTMEWIDGIPLSDIAAL-DE--AGLD---RKALAENLARSFL 270 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcC----CceEEEEeECCcccccHHHH-Hh--cCCC---HHHHHHHHHHHHH
Confidence 1244433333 23333444444432222 256999999974 3333221 11 1112 2335555555 46
Q ss_pred HHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccc
Q 018619 126 AYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 126 ~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~ 165 (353)
..+|. .|++|+|+||.||+++. +++++++|||++....
T Consensus 271 ~ql~~-~g~~H~D~hPgNilv~~-~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 271 NQVLR-DGFFHADLHPGNIFVLK-DGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHh-CCceeCCCCcccEEECC-CCcEEEEeCCCeeECC
Confidence 78899 79999999999999985 7889999999997654
No 442
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.43 E-value=1.1e-11 Score=112.13 Aligned_cols=215 Identities=18% Similarity=0.231 Sum_probs=156.7
Q ss_pred CeEEEEEEECCCCcEEEEEEeecccc----chHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccccc--hHHH
Q 018619 24 FGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE--SMYR 97 (353)
Q Consensus 24 ~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~--~l~~ 97 (353)
..+.|++....+|..|++|++..++. ....-++.++++.|+|+|.+.++|. ....++..+++|++|.++ +|++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~-t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFL-TYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhh-hhccCcceEEEEEecCCCCchHHH
Confidence 35789999999999999999943332 2235688999999999999999986 344566678999999984 6666
Q ss_pred HHHhh-----------hhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 98 VLKHY-----------SSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 98 ~l~~~-----------~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
..... ...+...++..+|.++.||..||.++|+ .|..-+-|.|.+|+++. +.+++|...|.......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs-sGLAck~L~~~kIlv~G-~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS-SGLACKTLDLKKILVTG-KMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh-cCceeecccHhHeEeeC-cceEEEecccceeeecC
Confidence 54321 2234568999999999999999999999 79999999999999996 55899998888765544
Q ss_pred CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCCHHHHhhcCcCC
Q 018619 167 GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF-PGENAVDQLVEIIKVLGTPTREEIRCMNPNY 245 (353)
Q Consensus 167 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
+.. |.+.+ ..+-|.=.||.++..|.||..-- ............
T Consensus 446 d~~-------------~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~------------------- 489 (655)
T KOG3741|consen 446 DPT-------------EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR------------------- 489 (655)
T ss_pred CCC-------------cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH-------------------
Confidence 330 11212 23468899999999999996431 111111111111
Q ss_pred CCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcC
Q 018619 246 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 294 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~h 294 (353)
+....|.+++++|.-+...++++ -++.+++.|
T Consensus 490 ----------------I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 490 ----------------ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred ----------------hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 11346888999999888888886 577776644
No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.40 E-value=1.2e-12 Score=106.44 Aligned_cols=124 Identities=15% Similarity=0.164 Sum_probs=89.4
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeeccc---cchHHHHHHHHHcCCCcee-ecceeeeecCCCCceeEEEEeccc
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRVMDHPNVI-SLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
.+.|+.|..+.||++.. .++.|++|...... ....+|+.+++.+.+.+++ +++... ... .++|||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-----~~~--~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-----PET--GVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-----CCC--CeEEEEec
Confidence 46789999999999986 47889999875543 3456899999988655443 332221 111 35899999
Q ss_pred cchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCe-----eeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 92 PESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRV-----CHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 92 ~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i-----~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+|.... .. . .....++.+++.+|+.||+ .++ +|+|++|+||+++ ++.++++|||.+.
T Consensus 74 ~G~~l~---~~-----~---~~~~~~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~~Nil~~--~~~~~liDf~~a~ 135 (170)
T cd05151 74 EGSELL---TE-----D---FSDPENLEKIAKLLKKLHS-SPLPDLVPCHNDLLPGNFLLD--DGRLWLIDWEYAG 135 (170)
T ss_pred CCCccc---cc-----c---ccCHHHHHHHHHHHHHHhC-CCCCCceeecCCCCcCcEEEE--CCeEEEEeccccc
Confidence 984211 10 0 1123456799999999999 574 9999999999998 4569999999886
No 444
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=1.7e-13 Score=127.72 Aligned_cols=155 Identities=19% Similarity=0.331 Sum_probs=115.9
Q ss_pred HHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCC--------cce--eeeeceeeChhhhhCCC
Q 018619 120 QIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEA--------NIS--YICSRFYRAPELIFGAT 189 (353)
Q Consensus 120 qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~--------~~~--~~~t~~y~aPE~~~~~~ 189 (353)
+...|+.|+|...++||++|.|++|.++. ++.+||++|+.+....++.. ... ......|.|||.+.+ .
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na-~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNA-NGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-T 184 (700)
T ss_pred cccchhhhhccCcceeecccchhheeecc-CcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-c
Confidence 34489999999779999999999999996 88899999999875544211 011 122556999999966 4
Q ss_pred CCCccccchhHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCCh
Q 018619 190 EYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPP 268 (353)
Q Consensus 190 ~~~~~~DiwSlG~il~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
..+.++|++|+||++|.+. .|+..+...+............+.. ...+.+++++
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~-------------------------~~~~s~~~p~ 239 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAG-------------------------AFGYSNNLPS 239 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccc-------------------------cccccccCcH
Confidence 4789999999999999999 6777776655443322221110000 0112257899
Q ss_pred hHHHHHHHhcCcCCCCCCCHHHHhcCccccccc
Q 018619 269 EAIDLASRLLQYSPSLRCTALEACAHPFFDELR 301 (353)
Q Consensus 269 ~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~~ 301 (353)
++++=+.++|..|+..||++.+++..|||....
T Consensus 240 el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~ 272 (700)
T KOG2137|consen 240 ELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG 272 (700)
T ss_pred HHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence 999999999999999999999999999998743
No 445
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=8.8e-13 Score=121.35 Aligned_cols=247 Identities=19% Similarity=0.166 Sum_probs=171.0
Q ss_pred cceeeEeeeeecCCCeEEEEEEEC-CCCcEEEEEEeeccccch------HHHHHHHHHc-CCCceeecceeeeecCCCCc
Q 018619 10 TISYMAERVVGTGSFGIVFQAKCL-ETGETVAIKKVLQDRRYK------NRELQLMRVM-DHPNVISLKHCFFSTTSKNE 81 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~------~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 81 (353)
..++..+..||.|.|+.|+.+... .++..|++|...+..... ..|+.+...+ .|.+++.....|...+.
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~--- 340 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ--- 340 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc---
Confidence 346788999999999999987755 678899999776543222 2455555555 58888887777744433
Q ss_pred eeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 82 LFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 82 ~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
.|+-.|||.+.....-. .....+.+...+.+..|++.++.++|+ ..++|+|+||+||++...++..+++|||+.
T Consensus 341 --~~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s-~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 341 --GYIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHS-KLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred --ccCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccc-hhhhcccccccceeeccchhhhhccccccc
Confidence 55888999753222211 233557788889999999999999999 799999999999999853478999999998
Q ss_pred cccccCCCcceeeeeceee-ChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Q 018619 162 KQLIAGEANISYICSRFYR-APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 240 (353)
Q Consensus 162 ~~~~~~~~~~~~~~t~~y~-aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
....-.. ........+. .+|.+.....+..+.|++|||..+.+.++|.+.-........ +..
T Consensus 415 t~~~~~~--~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~---i~~------------ 477 (524)
T KOG0601|consen 415 TRLAFSS--GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLT---IRS------------ 477 (524)
T ss_pred cccceec--ccccccccccccchhhccccccccccccccccccccccccCcccCccccccee---eec------------
Confidence 6421111 1112222333 355555656688999999999999999998754322221111 000
Q ss_pred cCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCccccc
Q 018619 241 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 299 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~ 299 (353)
...+ .....+.++..+...++..|+..|+.+.++..|+=|..
T Consensus 478 -------~~~p----------~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 478 -------GDTP----------NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred -------cccc----------CCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 0000 01123467888999999999999999999988877754
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.30 E-value=5e-11 Score=94.22 Aligned_cols=139 Identities=17% Similarity=0.231 Sum_probs=95.4
Q ss_pred EeeeeecCCCeEEEEEEECCCCcEEEEEEee-cc-----------ccchHHHHHHHHHcCCCceeecceeeeecCCCCce
Q 018619 15 AERVVGTGSFGIVFQAKCLETGETVAIKKVL-QD-----------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~-----------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (353)
....+.+|+-+.|+++.. .|+.+.||.-. +. +....+|+++|.+..--.|.-..-+|.+...
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~---- 84 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG---- 84 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC----
Confidence 567889999999998765 88898888442 21 2333468888887643222222222323222
Q ss_pred eEEEEeccccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcE--EEeee
Q 018619 83 FLNLVMEYVPE--SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQV--KICDF 158 (353)
Q Consensus 83 ~~~lv~e~~~~--~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~v--kl~Df 158 (353)
-.++|||++| ++.+.+..... ..........++.++=..+.-||. ++|+|+||..+||++.+++..+ .++||
T Consensus 85 -~~i~ME~~~g~~~vk~~i~~~~~--~~~~d~~~~~~~~~iG~~igklH~-ndiiHGDLTTSNill~~~~~~~~~~lIdf 160 (229)
T KOG3087|consen 85 -GQIYMEFIDGASTVKDFILSTME--DESEDEGLAELARRIGELIGKLHD-NDIIHGDLTTSNILLRSDGNQITPILIDF 160 (229)
T ss_pred -CeEEEEeccchhHHHHHHHHHcc--CcccchhHHHHHHHHHHHHHHhhh-CCeecccccccceEEecCCCcCceEEEee
Confidence 4489999998 55555544222 222233336788889999999999 8999999999999998755544 89999
Q ss_pred ccccc
Q 018619 159 GSAKQ 163 (353)
Q Consensus 159 g~a~~ 163 (353)
|++..
T Consensus 161 gls~~ 165 (229)
T KOG3087|consen 161 GLSSV 165 (229)
T ss_pred cchhc
Confidence 99864
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=2.8e-10 Score=90.46 Aligned_cols=126 Identities=17% Similarity=0.272 Sum_probs=83.1
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEe-ecc-----------ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeE
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKV-LQD-----------RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~-~~~-----------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (353)
..+++|+-+.++.+.. -|..+++|.- +|. .....+|+.++..+.--.|....-++++... .
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~-----~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDN-----G 74 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-----C
Confidence 4578899999998854 4445667743 221 1233478888888753332222212222222 3
Q ss_pred EEEeccccchHHH-HHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 85 NLVMEYVPESMYR-VLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 85 ~lv~e~~~~~l~~-~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
.|+|||++|.+.. .+.. . . -.++..+=.-+.-||. +||+|+||.++||++.. +.+.++|||++..
T Consensus 75 ~I~me~I~G~~lkd~l~~----~---~----~~~~r~vG~~vg~lH~-~givHGDLTtsNiIl~~--~~i~~IDfGLg~~ 140 (204)
T COG3642 75 LIVMEYIEGELLKDALEE----A---R----PDLLREVGRLVGKLHK-AGIVHGDLTTSNIILSG--GRIYFIDFGLGEF 140 (204)
T ss_pred EEEEEEeCChhHHHHHHh----c---c----hHHHHHHHHHHHHHHh-cCeecCCCccceEEEeC--CcEEEEECCcccc
Confidence 4999999996544 3332 2 1 2345566666788999 79999999999999984 4599999999874
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.11 E-value=7.7e-10 Score=90.48 Aligned_cols=122 Identities=26% Similarity=0.308 Sum_probs=76.6
Q ss_pred EEEEEEECCCCcEEEEEEeeccc------------------------------cchHHHHHHHHHcCCCc--eeecceee
Q 018619 26 IVFQAKCLETGETVAIKKVLQDR------------------------------RYKNRELQLMRVMDHPN--VISLKHCF 73 (353)
Q Consensus 26 ~V~~~~~~~~~~~vaiK~~~~~~------------------------------~~~~~E~~~l~~l~h~~--iv~~~~~~ 73 (353)
.||.|.. ..|+.+|+|...... ....+|...|..+..-+ +.+.+.+-
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4888885 578899999774210 11236999999997553 44443321
Q ss_pred eecCCCCceeEEEEecccc--chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHH-hHcCCCeeeccCCCCcEEEeCCC
Q 018619 74 FSTTSKNELFLNLVMEYVP--ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAY-IHTVPRVCHRDLKPQNLLVDPLT 150 (353)
Q Consensus 74 ~~~~~~~~~~~~lv~e~~~--~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~-LH~~~~i~H~Dlkp~Nill~~~~ 150 (353)
. -++||||++ |.....+.. ..++......++.+++..+.. +|+ .||+|+||.+.||+++. +
T Consensus 80 -----~----~~ivME~I~~~G~~~~~l~~-----~~~~~~~~~~~~~~il~~~~~~~~~-~givHGDLs~~NIlv~~-~ 143 (188)
T PF01163_consen 80 -----R----NVIVMEYIGEDGVPLPRLKD-----VDLSPEEPKELLEEILEEIIKMLHK-AGIVHGDLSEYNILVDD-G 143 (188)
T ss_dssp -----T----TEEEEE--EETTEEGGCHHH-----CGGGGSTHHHHHHHHHHHHHHHHHC-TTEEESS-STTSEEEET-T
T ss_pred -----C----CEEEEEecCCCccchhhHHh-----ccccchhHHHHHHHHHHHHHHHHHh-cCceecCCChhhEEeec-c
Confidence 1 349999999 643233332 112234456677888886555 578 79999999999999995 4
Q ss_pred CcEEEeeeccccccc
Q 018619 151 HQVKICDFGSAKQLI 165 (353)
Q Consensus 151 ~~vkl~Dfg~a~~~~ 165 (353)
.+.++|||.+....
T Consensus 144 -~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 144 -KVYIIDFGQAVDSS 157 (188)
T ss_dssp -CEEE--GTTEEETT
T ss_pred -eEEEEecCcceecC
Confidence 79999999987543
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.10 E-value=3.1e-09 Score=92.11 Aligned_cols=133 Identities=11% Similarity=0.062 Sum_probs=89.3
Q ss_pred eEEEEEEECCCCcEEEEEEeeccc---------------cchHHHHHHHHHcCCCceeec--ceeeeecCCCCceeEEEE
Q 018619 25 GIVFQAKCLETGETVAIKKVLQDR---------------RYKNRELQLMRVMDHPNVISL--KHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 25 g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~E~~~l~~l~h~~iv~~--~~~~~~~~~~~~~~~~lv 87 (353)
..|..+. ..|+.|.||...... ....+|...+..+..-+|... +.+...........-++|
T Consensus 36 rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 3455544 367788888663211 125588888877754333332 222211111112335699
Q ss_pred eccccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC------CCCcEEEeeec
Q 018619 88 MEYVPE--SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP------LTHQVKICDFG 159 (353)
Q Consensus 88 ~e~~~~--~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~------~~~~vkl~Dfg 159 (353)
||++++ ++.+.+.... ..+.+......++.+++..+.-||. +||+|+|+++.|||++. ++..+.|+||+
T Consensus 114 te~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~ 190 (268)
T PRK15123 114 TEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLH 190 (268)
T ss_pred EeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence 999997 5666654322 2445667788999999999999999 79999999999999974 24689999999
Q ss_pred ccc
Q 018619 160 SAK 162 (353)
Q Consensus 160 ~a~ 162 (353)
.+.
T Consensus 191 r~~ 193 (268)
T PRK15123 191 RAQ 193 (268)
T ss_pred ccc
Confidence 885
No 450
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.09 E-value=2e-09 Score=91.44 Aligned_cols=139 Identities=18% Similarity=0.186 Sum_probs=92.5
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeecc-----ccchHHHHHHHHHcCCCc--eeecceeeeecCCCCceeEEEEec
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRVMDHPN--VISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~E~~~l~~l~h~~--iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
+.|+.|..+.||++... +|+.|++|..... .....+|..+++.+.+.+ +.+++.... ........++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~--~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCE--DPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECC--CCCccCCceEEEE
Confidence 57899999999999863 3689999987643 235578999999987533 344443321 1111123579999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC--------------------------------------
Q 018619 90 YVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTV-------------------------------------- 131 (353)
Q Consensus 90 ~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~-------------------------------------- 131 (353)
|++|...... .. ...+++.....++.+++.+|..||+.
T Consensus 81 ~i~G~~l~~~---~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 81 RVDGRVLRDR---LL-RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EeCCEecCCC---CC-CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 9997421111 00 02355555666666666666666641
Q ss_pred -----------------CCeeeccCCCCcEEEeCC-CCcEEEeeecccc
Q 018619 132 -----------------PRVCHRDLKPQNLLVDPL-THQVKICDFGSAK 162 (353)
Q Consensus 132 -----------------~~i~H~Dlkp~Nill~~~-~~~vkl~Dfg~a~ 162 (353)
..++|+|++|.||+++.+ ++.+.|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 246999999999999853 3568999999886
No 451
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.94 E-value=1.9e-08 Score=89.52 Aligned_cols=198 Identities=14% Similarity=0.160 Sum_probs=129.3
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchH-HHHHHHHH-cCCCceeecceee----eecCCCCceeEEE
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-RELQLMRV-MDHPNVISLKHCF----FSTTSKNELFLNL 86 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~E~~~l~~-l~h~~iv~~~~~~----~~~~~~~~~~~~l 86 (353)
....+.||+|+-+.+|-.-.. + -.+.|++........ +.+..|-. -.||-+.. .-.+ ....+. .....+
T Consensus 13 i~~gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~-rvaWPqa~L~G~~~-~~~iGf 87 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPPAAQAQKVAELAATPDAPLLNY-RVAWPQATLHGGRR-GKVIGF 87 (637)
T ss_pred cCCCccccCCccceeeecchh--h-chhheeecCCCchHHHHHHHHhccCCCCcchhh-hhcccHHHhhCCCc-cceeEE
Confidence 356678999999999865432 2 234477755433221 22222222 24543322 1111 111112 223668
Q ss_pred Eeccccch--HHHHHH--hhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 87 VMEYVPES--MYRVLK--HYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 87 v~e~~~~~--l~~~l~--~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.|+.+.|- ...++. .....-....+..+.+.++.|+.+.+.||. +|.+-+|++++|+|++. ++.|.|.|=..-.
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd-~~~V~LVdsDsfq 165 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSD-DSKVVLVDSDSFQ 165 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeec-CceEEEEccccee
Confidence 88888862 211211 122233457899999999999999999999 79999999999999995 8889998866544
Q ss_pred ccccCCCcceeeeeceeeChhhhhC----CCCCCccccchhHHHHHHHHHhC-CCCCCCC
Q 018619 163 QLIAGEANISYICSRFYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLG-QPLFPGE 217 (353)
Q Consensus 163 ~~~~~~~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwSlG~il~~l~~g-~~pf~~~ 217 (353)
....+......+|...|.+||.-.- ...-+..+|.|.||+++++++.| +.||.+-
T Consensus 166 i~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 166 INANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred eccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 4444444455678899999998531 12246789999999999999987 8999763
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.85 E-value=2.7e-08 Score=84.02 Aligned_cols=132 Identities=20% Similarity=0.178 Sum_probs=92.2
Q ss_pred eeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc--------------------------ccchHHHHHHHHHcCCC--
Q 018619 13 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--------------------------RRYKNRELQLMRVMDHP-- 64 (353)
Q Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------------------------~~~~~~E~~~l~~l~h~-- 64 (353)
+.+...||.|--|.||.|.+ ..|.++|||.=.-. +...++|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 46778999999999999985 48999999933110 12234799999988644
Q ss_pred ceeecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcE
Q 018619 65 NVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNL 144 (353)
Q Consensus 65 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Ni 144 (353)
.+.+.++ .....+|||+++|-. +.. -+++.+....++..|+.-+..+-. .|++|+|+++-||
T Consensus 172 ~VP~P~~---------~nRHaVvMe~ieG~e---L~~-----~r~~~en~~~il~~il~~~~~~~~-~GiVHGDlSefNI 233 (304)
T COG0478 172 KVPKPIA---------WNRHAVVMEYIEGVE---LYR-----LRLDVENPDEILDKILEEVRKAYR-RGIVHGDLSEFNI 233 (304)
T ss_pred CCCCccc---------cccceeeeehcccce---eec-----ccCcccCHHHHHHHHHHHHHHHHH-cCccccCCchheE
Confidence 4444322 122569999999842 211 112344455556666666665556 6999999999999
Q ss_pred EEeCCCCcEEEeeecccccc
Q 018619 145 LVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 145 ll~~~~~~vkl~Dfg~a~~~ 164 (353)
++++ ++.+.++||--+...
T Consensus 234 lV~~-dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 234 LVTE-DGDIVVIDWPQAVPI 252 (304)
T ss_pred EEec-CCCEEEEeCcccccC
Confidence 9996 778999999877643
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.81 E-value=1.9e-07 Score=76.95 Aligned_cols=137 Identities=12% Similarity=0.082 Sum_probs=96.2
Q ss_pred ecCCCeEEEEEEECCCCcEEEEEEeec----------cccchHHHHHHHHHcCCCce--eecceeeeecCCCCceeEEEE
Q 018619 20 GTGSFGIVFQAKCLETGETVAIKKVLQ----------DRRYKNRELQLMRVMDHPNV--ISLKHCFFSTTSKNELFLNLV 87 (353)
Q Consensus 20 g~G~~g~V~~~~~~~~~~~vaiK~~~~----------~~~~~~~E~~~l~~l~h~~i--v~~~~~~~~~~~~~~~~~~lv 87 (353)
|+||.+.|+.... .|+.|-+|.... ....+.+|+..+..+..-++ .+.. .+-.........-+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 5688999998764 444788886642 23455689999988854333 3332 1111222334456799
Q ss_pred eccccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCc--EEEeeeccccc
Q 018619 88 MEYVPE--SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQ--VKICDFGSAKQ 163 (353)
Q Consensus 88 ~e~~~~--~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~--vkl~Dfg~a~~ 163 (353)
+|-++| +|.+.+... .-.+.+......++.++..++.-||+ .|+.|+|+-+.||+++. ++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~-~Gv~Hgdly~khIll~~-~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHS-VNRQHGCCYVRHIYVKT-EGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHhheeecC-CCCeeEEEEEhhccch
Confidence 998884 666555431 12355777778899999999999999 79999999999999984 345 99999987764
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.80 E-value=4.7e-08 Score=81.94 Aligned_cols=108 Identities=18% Similarity=0.216 Sum_probs=75.2
Q ss_pred chHHHHHHHHHcCCCcee--ecceeeeecCCCCceeEEEEeccccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHH
Q 018619 50 YKNRELQLMRVMDHPNVI--SLKHCFFSTTSKNELFLNLVMEYVPE--SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGL 125 (353)
Q Consensus 50 ~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~~lv~e~~~~--~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al 125 (353)
...+|...+..+..-.|. +.+.+..... ......++|+|++++ +|.+.+.. ....+......++.++...+
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~~~~----~~~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDLLQQ----WEQLDPSQRRELLRALARLI 131 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHHHHh----hcccchhhHHHHHHHHHHHH
Confidence 345788877777533332 2222222211 222446799999986 45555543 22266677888999999999
Q ss_pred HHhHcCCCeeeccCCCCcEEEeCCC--CcEEEeeeccccc
Q 018619 126 AYIHTVPRVCHRDLKPQNLLVDPLT--HQVKICDFGSAKQ 163 (353)
Q Consensus 126 ~~LH~~~~i~H~Dlkp~Nill~~~~--~~vkl~Dfg~a~~ 163 (353)
.-||. +||+|+|++|.|||++..+ ..+.++||+-++.
T Consensus 132 ~~lH~-~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKLHD-AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHH-CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999 7999999999999998633 2799999998764
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.78 E-value=1.4e-07 Score=78.13 Aligned_cols=139 Identities=15% Similarity=0.166 Sum_probs=86.9
Q ss_pred eecceeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchH-------------HHHHHHHHcCCCcee---ecce
Q 018619 8 LQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------------RELQLMRVMDHPNVI---SLKH 71 (353)
Q Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------------~E~~~l~~l~h~~iv---~~~~ 71 (353)
+..++|.+.+++-......|.+.. ..|+.+++|.........+ +++.....+....+. .++.
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 346789999999998888887766 4778999997754332222 233333333322222 2211
Q ss_pred eeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCC
Q 018619 72 CFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTH 151 (353)
Q Consensus 72 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~ 151 (353)
+..-....-....+++|||++|--...+ ..+++ .+...+..++.-+|+ .|+.|+|.+|.|++++. +
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~-------~~i~e----~~~~ki~~~ikqlH~-~G~~HGD~hpgNFlv~~--~ 171 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDI-------EDIDE----DLAEKIVEAIKQLHK-HGFYHGDPHPGNFLVSN--N 171 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccc-------hhcCH----HHHHHHHHHHHHHHH-cCCccCCCCcCcEEEEC--C
Confidence 1111111222335689999998411111 11222 244567788999999 79999999999999984 4
Q ss_pred cEEEeeecccc
Q 018619 152 QVKICDFGSAK 162 (353)
Q Consensus 152 ~vkl~Dfg~a~ 162 (353)
.++++||+..+
T Consensus 172 ~i~iID~~~k~ 182 (229)
T PF06176_consen 172 GIRIIDTQGKR 182 (229)
T ss_pred cEEEEECcccc
Confidence 49999998765
No 456
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.74 E-value=3.4e-08 Score=92.78 Aligned_cols=136 Identities=21% Similarity=0.310 Sum_probs=83.4
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc--------------------------------------------cchH
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------------------------------------------RYKN 52 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------------------------------------~~~~ 52 (353)
+-|+.++-|.||.|+- .+|+.||||+...+- -...
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 5678999999999995 569999999874221 0001
Q ss_pred HHHHHHHHc----CCCceeecceeeeecCCCCceeEEEEeccccch-HHHH--HHhhhhcCCCCCHHHHHHHHHHHHHHH
Q 018619 53 RELQLMRVM----DHPNVISLKHCFFSTTSKNELFLNLVMEYVPES-MYRV--LKHYSSANQRMPLIYVKLYTYQIFRGL 125 (353)
Q Consensus 53 ~E~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~--l~~~~~~~~~l~~~~~~~i~~qll~al 125 (353)
+|...+.++ +...-+.+-.++.+.++. -.++|||++|. +.+. +.........+...-+..++.|++.
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~----~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~-- 283 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTR----RVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLR-- 283 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCC----cEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHh--
Confidence 355544444 233334444555333322 34999999983 2222 2211001112233333334444333
Q ss_pred HHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeecccccccc
Q 018619 126 AYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 126 ~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~ 166 (353)
.|++|+|.+|.||+++. ++++.+.|||+.....+
T Consensus 284 ------dgffHaDpHpGNi~v~~-~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 ------DGFFHADPHPGNILVRS-DGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ------cCccccCCCccceEEec-CCcEEEEcCcceecCCH
Confidence 59999999999999997 78999999999876544
No 457
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.74 E-value=2.2e-09 Score=99.84 Aligned_cols=245 Identities=20% Similarity=0.175 Sum_probs=162.8
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHcCCCc-eeecceeeeecCCCCceeEEEEecccc
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPN-VISLKHCFFSTTSKNELFLNLVMEYVP 92 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~~~~~~lv~e~~~ 92 (353)
....-+++|+++++++.+...+...+ .+.+... ....-++++|.+.+||| .+..++ +.+.+.+.++.+++++
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-l~~rl~~eLLdK~n~P~~~v~~~~-----d~~~E~~~~i~~~i~s 317 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-LSRRLAIELLDKVNNPNPVVRYLE-----DYDGEDYLWIPMRICS 317 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-hhhHHHHHHHHHccCCCCcccccc-----cCCcccccchhhhhhc
Confidence 44556788999999988865554444 5555433 44446899999999999 333332 3366667889999998
Q ss_pred chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCcce
Q 018619 93 ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS 172 (353)
Q Consensus 93 ~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~ 172 (353)
++-. ...........+...+...+.+.-+++++++|+ ..=+|+| ||+..+ +..|..||+....+.......+
T Consensus 318 ~~rs-~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~-~~~~~~d----~~l~s~--~~~~~~~~~v~~~L~~~~~~~t 389 (829)
T KOG0576|consen 318 TGRS-SALEMTVSEIALEQYQFAYPLRKETRPLAELHS-SYKVHRD----NILGSE--EEVKLLDFAVPPQLTRTMKPRT 389 (829)
T ss_pred CCcc-ccccCChhhHhhhhhhhhhhhhhhccccccccc-ccccCcc----cccccc--cccccccccCCcccCccccccc
Confidence 5400 000000112234444555666777889999998 4557888 888874 5689999999887766555667
Q ss_pred eeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCC
Q 018619 173 YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 252 (353)
Q Consensus 173 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (353)
..+++.++|||+.... .+....|.||+|+-..+|.-|.+|-...... . ...|..+ -....
T Consensus 390 ~~~~~~~~~pev~~~~-~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~--~----~~~g~~p-------------~s~~L 449 (829)
T KOG0576|consen 390 AIGTPEPLAPEVIQEN-TIDGCPDSGSLAVSAIQMAPGLPPRSSPPAV--L----PMIGNGP-------------NSPML 449 (829)
T ss_pred CCCCCCCCCchhhccc-ccccCCCccCCCcchhhcCCCCCCCCCCccc--c----CCCCCCC-------------Ccccc
Confidence 7889999999998554 4888999999999888888887775441100 0 0000000 00111
Q ss_pred CCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHhcCcccccc
Q 018619 253 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 300 (353)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l~hp~f~~~ 300 (353)
.....|...++. ++...|+..-|..|+....++-|.+|...
T Consensus 450 ~~~~aw~~~~~~-------~~~~~~~~g~P~~pkv~mgacfsKvfngC 490 (829)
T KOG0576|consen 450 TDKSAWSPVFHR-------DFPAPCLNGLPPTPKVHMGACFSKVFNGC 490 (829)
T ss_pred chhhhcCccccc-------CCcccccCCCCCCCcchhhHHHHHHhccC
Confidence 112344443332 67889999999999999999999999864
No 458
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.60 E-value=7.1e-07 Score=74.77 Aligned_cols=133 Identities=19% Similarity=0.176 Sum_probs=88.3
Q ss_pred eeecCCCeEEEEEEECCCCcEEEEEEeecccc----------------------------chHHHHHHHHHcCCCc--ee
Q 018619 18 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----------------------------YKNRELQLMRVMDHPN--VI 67 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----------------------------~~~~E~~~l~~l~h~~--iv 67 (353)
.|++|--+.||+|.. ..+..+|+|++..... ...+|..-|+++.... +.
T Consensus 55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 566677778999874 6788999998843210 1125777777764322 22
Q ss_pred ecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEe
Q 018619 68 SLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVD 147 (353)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~ 147 (353)
+.+.+. . ..+||||++... ...-....-++...++..+..+++..+.-|-...++||+||+.-|||+.
T Consensus 134 ~Pi~~~-----~----nVLvMEfIg~~g---~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~ 201 (268)
T COG1718 134 EPIAFR-----N----NVLVMEFIGDDG---LPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH 201 (268)
T ss_pred Cceeec-----C----CeEEEEeccCCC---CCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE
Confidence 222222 1 349999998531 1110111233444467888889999988877635999999999999998
Q ss_pred CCCCcEEEeeeccccccc
Q 018619 148 PLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 148 ~~~~~vkl~Dfg~a~~~~ 165 (353)
++.+.++|||-|....
T Consensus 202 --~~~p~iID~~QaV~~~ 217 (268)
T COG1718 202 --DGEPYIIDVSQAVTID 217 (268)
T ss_pred --CCeEEEEECccccccC
Confidence 5679999999887554
No 459
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.60 E-value=1.6e-07 Score=93.30 Aligned_cols=203 Identities=23% Similarity=0.313 Sum_probs=134.8
Q ss_pred HHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHc
Q 018619 52 NRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHT 130 (353)
Q Consensus 52 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~ 130 (353)
+.|+..+....|+|++.++.+-+.....+ ....+..++|.. ++...+. .-+..+...++.+..+++.||.++|+
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q----~v~~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQ----SVGSIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHh----hccccCHHHHHHHHHHHhhhHHHHHH
Confidence 35777888889999999876543322222 123344566664 3333333 35778999999999999999999999
Q ss_pred CCCeeeccCCCC---cEEEeCCCCcEEEe--eeccccccccCCCcceeeeeceeeChhhhhCCCCCC--ccccchhHHHH
Q 018619 131 VPRVCHRDLKPQ---NLLVDPLTHQVKIC--DFGSAKQLIAGEANISYICSRFYRAPELIFGATEYT--TSIDIWSAGCV 203 (353)
Q Consensus 131 ~~~i~H~Dlkp~---Nill~~~~~~vkl~--Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~--~~~DiwSlG~i 203 (353)
....|.-+..+ +--.+. .+.+..+ ||+.+..............+..+.+||..... .+. ...|+|++|..
T Consensus 305 -~~l~~v~L~~s~~~~~~~~~-e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~-~~~~~r~~dL~~lgll 381 (1351)
T KOG1035|consen 305 -LSLEHVVLSASSSKESTVDG-EGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKEN-TAKKSRLTDLWCLGLL 381 (1351)
T ss_pred -hccceeEEecccccccccCc-cceeecchhhhcccccCCCcccchhhcCccccccccccccc-cchhhhhhHHHHHHHH
Confidence 55555444444 222232 3456666 88888877666666666667778888887432 233 34699999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCC
Q 018619 204 LAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 283 (353)
Q Consensus 204 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 283 (353)
...+..|..+-..... .... .......+..+++.+|+.-|++
T Consensus 382 ~~~~~~~~~i~~~~~~---~~~~-----------------------------------l~~~~~~~~~d~~~~~~~~~~~ 423 (1351)
T KOG1035|consen 382 LLQLSQGEDISEKSAV---PVSL-----------------------------------LDVLSTSELLDALPKCLDEDSE 423 (1351)
T ss_pred HhhhhhcCcccccccc---hhhh-----------------------------------hccccchhhhhhhhhhcchhhh
Confidence 9999987644211100 0000 0011122778999999999999
Q ss_pred CCCCHHHHhcCcccccc
Q 018619 284 LRCTALEACAHPFFDEL 300 (353)
Q Consensus 284 ~R~t~~~~l~hp~f~~~ 300 (353)
+|+++.+++.|||.+--
T Consensus 424 ~Rl~~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 424 ERLSALELLTHPFLRFP 440 (1351)
T ss_pred hccchhhhhhchhcccc
Confidence 99999999999998753
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.49 E-value=1.2e-06 Score=74.78 Aligned_cols=75 Identities=20% Similarity=0.207 Sum_probs=49.2
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHcCCCc--eeecceeeeecCCCCceeEEEEeccc
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--RRYKNRELQLMRVMDHPN--VISLKHCFFSTTSKNELFLNLVMEYV 91 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~E~~~l~~l~h~~--iv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (353)
++.|+.|..+.||.+.... ..+++|..... .....+|..+++.+.... +.+++... .........+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~--~~~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFD--TSDEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEE--EETEETSEEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeec--ccccccccceEEEEEe
Confidence 5789999999999998643 59999987655 344567888888875332 33443322 1112233477999999
Q ss_pred cch
Q 018619 92 PES 94 (353)
Q Consensus 92 ~~~ 94 (353)
+|.
T Consensus 78 ~g~ 80 (239)
T PF01636_consen 78 PGR 80 (239)
T ss_dssp SSE
T ss_pred ccc
Confidence 863
No 461
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.43 E-value=1.1e-06 Score=82.40 Aligned_cols=138 Identities=19% Similarity=0.229 Sum_probs=82.0
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeecccc-----------------------------------------chHHH
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----------------------------------------YKNRE 54 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------------------------------~~~~E 54 (353)
.+-||..+.|.||+|+-+ +|+.||||+...+-+ .+.+|
T Consensus 166 ~~piaaASlaQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred cchhhhcchhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 357889999999999965 599999997743210 00123
Q ss_pred HHHHH----HcCCCc---eeecceeeeecCCCCceeEEEEeccccch---HHHHHHhhhhcCCCCCHHHHHHHHHHHHHH
Q 018619 55 LQLMR----VMDHPN---VISLKHCFFSTTSKNELFLNLVMEYVPES---MYRVLKHYSSANQRMPLIYVKLYTYQIFRG 124 (353)
Q Consensus 55 ~~~l~----~l~h~~---iv~~~~~~~~~~~~~~~~~~lv~e~~~~~---l~~~l~~~~~~~~~l~~~~~~~i~~qll~a 124 (353)
++-.. .+.|-+ -|.+-.++.+..+. -.++||||+|. -.+.+.. ..++...+..-+.+...-
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~----RVLtME~~~G~~i~Dl~~i~~-----~gi~~~~i~~~l~~~~~~ 315 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLSTK----RVLTMEYVDGIKINDLDAIDK-----RGISPHDILNKLVEAYLE 315 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcCcc----eEEEEEecCCccCCCHHHHHH-----cCCCHHHHHHHHHHHHHH
Confidence 33222 223444 22333444332222 44999999972 1223332 334444443333222211
Q ss_pred HHHhHcCCCeeeccCCCCcEEEeC---CCCcEEEeeecccccccc
Q 018619 125 LAYIHTVPRVCHRDLKPQNLLVDP---LTHQVKICDFGSAKQLIA 166 (353)
Q Consensus 125 l~~LH~~~~i~H~Dlkp~Nill~~---~~~~vkl~Dfg~a~~~~~ 166 (353)
-+-. .|++|+|-+|.||++.+ .++.+.+-|||+......
T Consensus 316 --qIf~-~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 316 --QIFK-TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred --HHHh-cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 1122 59999999999999984 367899999999876543
No 462
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.34 E-value=6.4e-06 Score=69.96 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=44.4
Q ss_pred eeeecCCCeEEEEEEECCCCcEEEEEEeeccc--cchHHHHHHHHHcCCCce--eecceeeeecCCCCceeEEEEecccc
Q 018619 17 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRVMDHPNV--ISLKHCFFSTTSKNELFLNLVMEYVP 92 (353)
Q Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~E~~~l~~l~h~~i--v~~~~~~~~~~~~~~~~~~lv~e~~~ 92 (353)
..||+|..+.||+. .+..+++|...... ....+|.++++.+..-.+ .+.+.+. ......++|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~-----~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLV-----EDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEE-----ecCCeeeeeeeecC
Confidence 57899999999973 25568889775432 335689999988753322 2333322 12222568999999
Q ss_pred ch
Q 018619 93 ES 94 (353)
Q Consensus 93 ~~ 94 (353)
|.
T Consensus 78 G~ 79 (226)
T TIGR02172 78 GK 79 (226)
T ss_pred Cc
Confidence 83
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=98.13 E-value=3.2e-05 Score=78.32 Aligned_cols=78 Identities=18% Similarity=0.190 Sum_probs=50.6
Q ss_pred EeeeeecCCCeEEEEEEECCCC--cEEEEEEeecc-----ccchHHHHHHHHHcC-CCce--eecceeeeecCCCCceeE
Q 018619 15 AERVVGTGSFGIVFQAKCLETG--ETVAIKKVLQD-----RRYKNRELQLMRVMD-HPNV--ISLKHCFFSTTSKNELFL 84 (353)
Q Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~-----~~~~~~E~~~l~~l~-h~~i--v~~~~~~~~~~~~~~~~~ 84 (353)
-.+.++.|.++.+|++.....+ ..+++|+.+.. .....+|+.+++.+. |.++ .+++..+.+. ......
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~--~v~G~~ 119 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDA--SVIGTA 119 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCC--CcCCCc
Confidence 3577899999999998764332 46888876432 234678999999995 6654 4433333111 111236
Q ss_pred EEEeccccch
Q 018619 85 NLVMEYVPES 94 (353)
Q Consensus 85 ~lv~e~~~~~ 94 (353)
|+||||++|.
T Consensus 120 flVME~v~G~ 129 (822)
T PLN02876 120 FYIMEYLEGR 129 (822)
T ss_pred eEEEEecCCc
Confidence 6999999874
No 464
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.11 E-value=2.1e-05 Score=62.51 Aligned_cols=127 Identities=22% Similarity=0.329 Sum_probs=83.6
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHcCCCceeecceeeeecCCCCceeEEEEec
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--RRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
.-++.+.|+.|..|.||++.. .|..+|+|+-..+ +..++.|+++|..++-.++..-. +++.. -++.||
T Consensus 23 ~~~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~v-y~yg~-------~~i~me 92 (201)
T COG2112 23 ELRVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEV-YFYGE-------DFIRME 92 (201)
T ss_pred hhhhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceE-EEech-------hhhhhh
Confidence 346778999999999999886 6678999977554 45567999999998765543311 12111 226699
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCC-CC-cEEEeCCCCcEEEeeecccc
Q 018619 90 YVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLK-PQ-NLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 90 ~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlk-p~-Nill~~~~~~vkl~Dfg~a~ 162 (353)
|..| .|.+.... .+.. -+..++++---|-. .||-|..|. |. ||+++ +..+.|+||..|+
T Consensus 93 ~i~G~~L~~~~~~-------~~rk----~l~~vlE~a~~LD~-~GI~H~El~~~~k~vlv~--~~~~~iIDFd~At 154 (201)
T COG2112 93 YIDGRPLGKLEIG-------GDRK----HLLRVLEKAYKLDR-LGIEHGELSRPWKNVLVN--DRDVYIIDFDSAT 154 (201)
T ss_pred hhcCcchhhhhhc-------ccHH----HHHHHHHHHHHHHH-hccchhhhcCCceeEEec--CCcEEEEEccchh
Confidence 9998 43322210 0222 23345566555666 699999986 44 55554 4479999999987
No 465
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.99 E-value=9.6e-05 Score=63.70 Aligned_cols=69 Identities=16% Similarity=0.074 Sum_probs=41.8
Q ss_pred eecCCC-eEEEEEEECCCCcEEEEEEeecc-ccchHHHHHHHHHcCC-CceeecceeeeecCCCCceeEEEEeccccch
Q 018619 19 VGTGSF-GIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRVMDH-PNVISLKHCFFSTTSKNELFLNLVMEYVPES 94 (353)
Q Consensus 19 lg~G~~-g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~ 94 (353)
|..|.+ ..||++.. .+..+.+|..... .....+|+.+++.+.. -.+.+++.... .....++|||+++|.
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~~~~~lv~e~i~G~ 77 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGS-----DDGRAWLLTSAVPGV 77 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEe-----cCCccEEEEEeeCCc
Confidence 444555 78998864 3467888877543 1345689999888842 22333433331 112356899999873
No 466
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.97 E-value=6.5e-05 Score=66.64 Aligned_cols=139 Identities=19% Similarity=0.217 Sum_probs=96.5
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc------c------------------------cchHHHHHHHHHcCC
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------R------------------------RYKNRELQLMRVMDH 63 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~------------------------~~~~~E~~~l~~l~h 63 (353)
.+...|..|--+.||.|. ..+|..+|||++... + ...++|.+-|++++.
T Consensus 147 ~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 456678888889999988 568889999987421 1 112367888888764
Q ss_pred CceeecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCc
Q 018619 64 PNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 143 (353)
Q Consensus 64 ~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~N 143 (353)
..|.-.--+.. . ...+||++++.+ ....-...+..++...++.+-.|++.-+.-|-+.+++||.||.=-|
T Consensus 226 aGIP~PePIlL----k---~hVLVM~FlGrd---gw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN 295 (520)
T KOG2270|consen 226 AGIPCPEPILL----K---NHVLVMEFLGRD---GWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN 295 (520)
T ss_pred cCCCCCCceee----e---cceEeeeeccCC---CCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence 44322111111 0 134999999843 1111112346678888888888888888888765799999999999
Q ss_pred EEEeCCCCcEEEeeeccccccc
Q 018619 144 LLVDPLTHQVKICDFGSAKQLI 165 (353)
Q Consensus 144 ill~~~~~~vkl~Dfg~a~~~~ 165 (353)
+|+- +|.+.++|.+-+....
T Consensus 296 ~Lyh--dG~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 296 LLYH--DGKLYIIDVSQSVEHD 315 (520)
T ss_pred heEE--CCEEEEEEccccccCC
Confidence 9997 6789999999876543
No 467
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.86 E-value=0.00025 Score=58.60 Aligned_cols=128 Identities=20% Similarity=0.291 Sum_probs=80.8
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeeccc--------------------cchHHHHHHHHHcC------CCceeec
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------------------RYKNRELQLMRVMD------HPNVISL 69 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------------~~~~~E~~~l~~l~------h~~iv~~ 69 (353)
...||+|+.-.||. | ..+....||+..... ....+|+.-...+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~--H-P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--H-PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEE--C-CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 35789999999985 3 344456778775544 33446777666655 7788888
Q ss_pred ceeeeecCCCCceeEEEEecccc---chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEE
Q 018619 70 KHCFFSTTSKNELFLNLVMEYVP---ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLV 146 (353)
Q Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~---~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill 146 (353)
++... .+.-..+|+|.+. |+....+..+. ..+.+++ .+... +-.-.++|-+ ++|+.+|++|.||++
T Consensus 83 ~G~ve-----T~~G~Glv~e~I~d~dG~~s~TL~~~l-~~~~~~~-~~~~~---L~~f~~~l~~-~~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 83 YGFVE-----TNLGLGLVVELIRDADGNISPTLEDYL-KEGGLTE-ELRQA---LDEFKRYLLD-HHIVIRDLNPHNIVV 151 (199)
T ss_pred eEEEe-----cCCceEEEEEEEECCCCCcCccHHHHH-HcCCccH-HHHHH---HHHHHHHHHH-cCCeecCCCcccEEE
Confidence 88763 3333667777774 33333343333 2345665 33333 3344567778 799999999999999
Q ss_pred eCCC--C-cEEEee
Q 018619 147 DPLT--H-QVKICD 157 (353)
Q Consensus 147 ~~~~--~-~vkl~D 157 (353)
...+ . .+.|+|
T Consensus 152 ~~~~~~~~~lvlID 165 (199)
T PF10707_consen 152 QRRDSGEFRLVLID 165 (199)
T ss_pred EecCCCceEEEEEe
Confidence 5322 2 566666
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.86 E-value=0.00019 Score=61.55 Aligned_cols=30 Identities=40% Similarity=0.579 Sum_probs=25.0
Q ss_pred CCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 132 PRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 132 ~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|+|+.|.||+++. +...-|+||+.|.
T Consensus 164 ~~l~HGD~~~~Nvlv~~-~~i~giIDw~~a~ 193 (235)
T cd05155 164 PVWFHGDLAPGNLLVQD-GRLSAVIDFGCLG 193 (235)
T ss_pred ceEEeCCCCCCcEEEEC-CCEEEEEeCcccC
Confidence 35899999999999984 5545799999875
No 469
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.84 E-value=0.00025 Score=58.25 Aligned_cols=127 Identities=22% Similarity=0.310 Sum_probs=85.9
Q ss_pred cceeeEeeeeecCCC-eEEEEEEECCCCcEEEEEEeec--------------ccc-----------chHHHHHHHHHc--
Q 018619 10 TISYMAERVVGTGSF-GIVFQAKCLETGETVAIKKVLQ--------------DRR-----------YKNRELQLMRVM-- 61 (353)
Q Consensus 10 ~~~y~~~~~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~--------------~~~-----------~~~~E~~~l~~l-- 61 (353)
+..++..+.||.|.- |.||+++- .|+.||+|.+.. ... .+..|-+..-+|
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 468899999999999 99999985 788999998311 000 112455544444
Q ss_pred -CCCce--eecceeeeecCC-------------CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHH
Q 018619 62 -DHPNV--ISLKHCFFSTTS-------------KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGL 125 (353)
Q Consensus 62 -~h~~i--v~~~~~~~~~~~-------------~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al 125 (353)
.+.++ |++++++.-... .......||.||+...- .++... +.+|++-+
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~~~----~~~~~~dl 177 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQIRD----IPQMLRDL 177 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccchhH----HHHHHHHH
Confidence 45566 888877643310 12223567888777531 223333 34777888
Q ss_pred HHhHcCCCeeeccCCCCcEEEeCCCCcEEEeeeccc
Q 018619 126 AYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSA 161 (353)
Q Consensus 126 ~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a 161 (353)
..+|. .||+-+|+++.|.. + -||+|||.+
T Consensus 178 ~~~~k-~gI~~~Dv~~~ny~----~--G~lvDfs~~ 206 (207)
T PF13095_consen 178 KILHK-LGIVPRDVKPRNYR----G--GKLVDFSSS 206 (207)
T ss_pred HHHHH-CCeeeccCcccccc----C--CEEEecccC
Confidence 99999 79999999999985 2 389999865
No 470
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.77 E-value=0.00019 Score=62.34 Aligned_cols=133 Identities=17% Similarity=0.215 Sum_probs=73.1
Q ss_pred eeecCCCeEEEEEEECCCCcEEEEEEeecccc----chHHHHHHHHHcCCCcee-ecceeeeecCCCCceeEEEEecccc
Q 018619 18 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRVMDHPNVI-SLKHCFFSTTSKNELFLNLVMEYVP 92 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~~~~~~lv~e~~~ 92 (353)
.+..|..+.+|++. .+++.+++|....... ...+|..+++.+....++ +++... . -++||||++
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~-----~----~~~v~e~i~ 71 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN-----E----HWLLVEWLE 71 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe-----C----CEEEEEecc
Confidence 35668888999887 3567899997654322 246799999988643332 222111 1 248899998
Q ss_pred chHHH-----------HH----Hhhh---hcCCCCCH-HHHHHHHHHH---------HHHHHHhHc-------CCCeeec
Q 018619 93 ESMYR-----------VL----KHYS---SANQRMPL-IYVKLYTYQI---------FRGLAYIHT-------VPRVCHR 137 (353)
Q Consensus 93 ~~l~~-----------~l----~~~~---~~~~~l~~-~~~~~i~~ql---------l~al~~LH~-------~~~i~H~ 137 (353)
|.... .+ ...- ....+++. ..+..+..++ ...+..+-. ...++|+
T Consensus 72 G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~ 151 (256)
T TIGR02721 72 GEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHM 151 (256)
T ss_pred CcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecC
Confidence 73211 11 1100 01111221 1112222111 111121211 0258999
Q ss_pred cCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 138 DLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 138 Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
|+.|.||+++. ++ +.|+||..|..
T Consensus 152 Dl~~~Nil~~~-~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 152 DVHAYNLVVTP-QG-LKLIDWEYASD 175 (256)
T ss_pred CCCcCcEEEeC-CC-CEEEeccccCc
Confidence 99999999986 45 78999998863
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.77 E-value=0.00062 Score=58.25 Aligned_cols=69 Identities=17% Similarity=0.319 Sum_probs=43.8
Q ss_pred eeeeecCCCeEEEEEEECC-CCcEEEEEEeecccc---chHHHHHHHHHcCCCce-eecceeeeecCCCCceeEEEEecc
Q 018619 16 ERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQDRR---YKNRELQLMRVMDHPNV-ISLKHCFFSTTSKNELFLNLVMEY 90 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~---~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~~~~~~lv~e~ 90 (353)
.+.|..|-...+|++.... .++.|++|+...... ..++|..+++.+....+ .+++..+ .+ .++|||
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~-----~~----~~l~e~ 73 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATF-----QN----GLIYEF 73 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEe-----CC----cEEEEe
Confidence 4567888889999987432 367899997754322 23478989988854333 2332211 11 279999
Q ss_pred ccc
Q 018619 91 VPE 93 (353)
Q Consensus 91 ~~~ 93 (353)
++|
T Consensus 74 i~G 76 (235)
T cd05157 74 IPG 76 (235)
T ss_pred eCC
Confidence 876
No 472
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.76 E-value=7.6e-06 Score=83.83 Aligned_cols=213 Identities=16% Similarity=0.022 Sum_probs=138.2
Q ss_pred HHHHHHHcCCCceeecceeeeecCCCCceeEEEEecccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCC
Q 018619 54 ELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVP-ESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVP 132 (353)
Q Consensus 54 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~ 132 (353)
|.+.++...|+++.....-.... .....|..++||. |.+...+..-......+....+.....+.+.+..-+|+..
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~ps---~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPPS---ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhceeeecccccCCCC---CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 44555667899888765444222 2223568889998 5666666654555555666655555555577777777743
Q ss_pred C----eeeccCCCCcEEEeCCCCcEEEeeecccccccc-CCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHH
Q 018619 133 R----VCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAEL 207 (353)
Q Consensus 133 ~----i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l 207 (353)
+ -+|+++|+-|.++.. +.++|++++|+.+.... .......++++.|++|+.... -.++.++|+|+.|+.+|..
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVt-ny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~-ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVT-NYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE-IKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cCCccchhhhhhhhccceec-CCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHH
Confidence 3 479999999999996 88899999999983222 222334677889999998744 3477789999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCC
Q 018619 208 LLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 287 (353)
Q Consensus 208 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t 287 (353)
..|..+|... .+...+ +...+-..+..+ .-.|.++-.....+|-+.-..||.
T Consensus 1434 s~~n~~fi~f-----lq~~Lk-----------giidn~tf~sIe------------~l~pgdaNve~~~~Ll~K~~~rp~ 1485 (2724)
T KOG1826|consen 1434 SDGNAYFIFF-----LQPALK-----------GIIDNHTFFSIE------------KLKPGDANVEALHRLLWKYMERPG 1485 (2724)
T ss_pred hcccHHHHHH-----HHHHHc-----------Cccccccccccc------------ccCCCcccHHHHHHHHHHhhhcch
Confidence 9988777321 111111 111111111111 122445555555566666778999
Q ss_pred HHHHhcCccccc
Q 018619 288 ALEACAHPFFDE 299 (353)
Q Consensus 288 ~~~~l~hp~f~~ 299 (353)
-...+.-|.|.-
T Consensus 1486 q~isls~d~~a~ 1497 (2724)
T KOG1826|consen 1486 QYISLSRDHFAV 1497 (2724)
T ss_pred hhhhcccccccc
Confidence 988888888754
No 473
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.74 E-value=6.8e-05 Score=69.22 Aligned_cols=170 Identities=21% Similarity=0.263 Sum_probs=108.6
Q ss_pred HHHHHHHHcCCCceeecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCC
Q 018619 53 RELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVP 132 (353)
Q Consensus 53 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~ 132 (353)
-...+++.+.|+|.....++- ........+|||+++-++++.+.... +-.. +++ . +
T Consensus 31 gr~~~lktl~~~~l~~yl~~~----r~~~~r~IVV~e~~~~Sled~~~~~~-----l~~~-------s~~-------~-~ 86 (725)
T KOG1093|consen 31 GRFQYLKSLQHDNLCQYLDFS----RGKHERVIVVMEHYTMSLEDILKTGN-----LKDE-------SLL-------A-H 86 (725)
T ss_pred hhhHHHHhhcCccceeeEeee----cCccceEEEEehhhccchHHHHHhcc-----cchh-------hhc-------c-c
Confidence 456788889999998875543 22333477999999999888876421 1111 111 1 3
Q ss_pred CeeeccCCCCcEEEeCCCCcEEEeeeccccccccCCCcceeeeeceeeChhhhhCCCCCCccccchhHHHHHHHHHhCCC
Q 018619 133 RVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 212 (353)
Q Consensus 133 ~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~~l~~g~~ 212 (353)
++.|- |+ ++.+| -++. . | | ...++++||||+|.++.++..|..
T Consensus 87 ~~~~~-----~~--------~~~td-~~~t---~------------~--~------~~~~pKsdVwsl~~i~~el~L~~~ 129 (725)
T KOG1093|consen 87 GVLHL-----NI--------IYITD-HFLT---K------------Y--P------SPIGPKSDVWSLGFIILELYLGIS 129 (725)
T ss_pred cccee-----hh--------hhccc-cccc---c------------C--C------CCCCcchhhhhHHHHHHHHHHhhH
Confidence 44331 22 33333 0000 0 0 1 112359999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHhhcCcCCCCCcCCCCCCCccccccCCCCChhHHHHHHHhcCcCCCCCCCHHHHh
Q 018619 213 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 292 (353)
Q Consensus 213 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~~~l 292 (353)
.+......+....+.+....+..-....+ ...+...++.....+..+|+...|..||...++.
T Consensus 130 l~~~~~~s~~l~~i~k~~~~d~~~~~~a~-----------------e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~ 192 (725)
T KOG1093|consen 130 LEAELTESEYLEILLKYYTDDQELLSTAM-----------------EHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELS 192 (725)
T ss_pred HHHHHHHHHHHHHHHHhccCchhHHHHHH-----------------HHHHHHhhhHhHHHHhccCCccccccccchhHHh
Confidence 98887777777666665433332211100 0012224677888999999999999999999999
Q ss_pred cCcccccc
Q 018619 293 AHPFFDEL 300 (353)
Q Consensus 293 ~hp~f~~~ 300 (353)
.|+-|..+
T Consensus 193 k~~i~~ev 200 (725)
T KOG1093|consen 193 KRCSFTEV 200 (725)
T ss_pred cCccHHHH
Confidence 99999876
No 474
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.71 E-value=0.00088 Score=61.49 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=46.3
Q ss_pred EeeeeecCCCeEEEEEEECCCCcEEEEEEeec-----------cccchHHHHHHHHHcC---CCceeecceeeeecCCCC
Q 018619 15 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----------DRRYKNRELQLMRVMD---HPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----------~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~ 80 (353)
-.+.||.|....||++.....++.++||.-.. .......|.+.|+.+. ..++.+++.+- .
T Consensus 30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D-----~- 103 (401)
T PRK09550 30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD-----E- 103 (401)
T ss_pred eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC-----C-
Confidence 35689999999999999754336899997431 1122346788887763 23455554431 1
Q ss_pred ceeEEEEeccccc
Q 018619 81 ELFLNLVMEYVPE 93 (353)
Q Consensus 81 ~~~~~lv~e~~~~ 93 (353)
...++|||++++
T Consensus 104 -~~~~lVME~L~~ 115 (401)
T PRK09550 104 -ELAVTVMEDLSD 115 (401)
T ss_pred -CCCEEEEecCCC
Confidence 114599999874
No 475
>PRK10593 hypothetical protein; Provisional
Probab=97.70 E-value=0.00092 Score=59.37 Aligned_cols=76 Identities=5% Similarity=-0.050 Sum_probs=49.3
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHcCCC---ceeecceeeeecCCCCceeEEEEe
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--RRYKNRELQLMRVMDHP---NVISLKHCFFSTTSKNELFLNLVM 88 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~E~~~l~~l~h~---~iv~~~~~~~~~~~~~~~~~~lv~ 88 (353)
.-.+.||.|..+.||.... .+..+++|..... ......|...|+.+... .+.++++++..... ....++||
T Consensus 17 ~~~~~i~~G~~~~vy~~~~--~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~--~g~~~LVm 92 (297)
T PRK10593 17 SRVECISEQPYAALWALYD--SQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQS--PGPDVLLL 92 (297)
T ss_pred heeeecCCccceeEEEEEc--CCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCc--CCCeEEEE
Confidence 4466899999999999863 2335777765432 24667899999988532 45555544322111 22367999
Q ss_pred ccccc
Q 018619 89 EYVPE 93 (353)
Q Consensus 89 e~~~~ 93 (353)
|+++|
T Consensus 93 E~i~G 97 (297)
T PRK10593 93 ERLRG 97 (297)
T ss_pred eccCC
Confidence 99886
No 476
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.57 E-value=0.0003 Score=57.80 Aligned_cols=101 Identities=19% Similarity=0.156 Sum_probs=74.8
Q ss_pred HHHHHHHHcCC-CceeecceeeeecCCCCceeEEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHc
Q 018619 53 RELQLMRVMDH-PNVISLKHCFFSTTSKNELFLNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHT 130 (353)
Q Consensus 53 ~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~ 130 (353)
.|.-+++.+++ +++.++++.+ . -.+++||.+. +++.. ......-...++.....++.+++..+.+++.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C-----G----~~~v~E~~~~~~~~~~-~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~ 77 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC-----G----RFYVVEYVGAGSLYGI-YRPLSQFLQSPWEQRAKIALQLLELLEELDH 77 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC-----C----CEEEEEeecCcccccc-ccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 58888888876 6889988877 2 2368899884 33211 0000111346889999999999999999997
Q ss_pred C--CCeeeccCCCCcEEEeCCCCcEEEeeecccccc
Q 018619 131 V--PRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQL 164 (353)
Q Consensus 131 ~--~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~~ 164 (353)
. ..+.-+|++|+|+-++. ++++|++|.+.+...
T Consensus 78 ~~~~~~~lcDv~~~nfgv~~-~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 78 GPLGFFYLCDVSPDNFGVND-DGRLKLIDLDDVFVE 112 (188)
T ss_pred CCCCcEEEeecchHHeEEeC-CCcEEEEechhcchh
Confidence 2 24778899999999995 788999999987644
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.53 E-value=0.00082 Score=59.68 Aligned_cols=143 Identities=14% Similarity=0.036 Sum_probs=76.3
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeec-cccchHHHHHHHHHcCCCc--eeecceeeeecC--CCCceeEEEEecc
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-DRRYKNRELQLMRVMDHPN--VISLKHCFFSTT--SKNELFLNLVMEY 90 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~E~~~l~~l~h~~--iv~~~~~~~~~~--~~~~~~~~lv~e~ 90 (353)
.+.+..|....+|++.. .+..+++|+... .......|+.++..+.+.. +.+++... ... .......++|+++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~-~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEKVSAEELPFFLALLDHLAERGLPVPRPIADR-DGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCCCChHhccHHHHHHHHHHHCCCCCCccccCC-CCcEeeeeCCceEEEEEe
Confidence 55777788889998864 445789998764 2334557888888874332 33332210 000 0111235689999
Q ss_pred ccchHH------------HHH---Hhhhhc-CCC----CCHHHHH------------HHHHHHHHHHHHhHc------CC
Q 018619 91 VPESMY------------RVL---KHYSSA-NQR----MPLIYVK------------LYTYQIFRGLAYIHT------VP 132 (353)
Q Consensus 91 ~~~~l~------------~~l---~~~~~~-~~~----l~~~~~~------------~i~~qll~al~~LH~------~~ 132 (353)
++|... ..+ ...... ... ....... .....+..++.++.+ ..
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 976211 111 110000 000 0000000 011112233333332 14
Q ss_pred CeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 133 RVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 133 ~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+++|+|+.|.||+++. ++.+.|+||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~~-~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFDG-DELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEeC-CceEEEeehhhhc
Confidence 7999999999999995 5656899999875
No 478
>PRK05231 homoserine kinase; Provisional
Probab=97.42 E-value=0.0021 Score=57.81 Aligned_cols=30 Identities=30% Similarity=0.261 Sum_probs=25.6
Q ss_pred CCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 132 PRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 132 ~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|+|++|+||+++. +...-|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEG-DRLSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEEC-CceEEEEeccccc
Confidence 48999999999999984 5545899999875
No 479
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.38 E-value=0.0022 Score=57.37 Aligned_cols=145 Identities=16% Similarity=0.055 Sum_probs=76.1
Q ss_pred EeeeeecCCCeEEEEEEECCCCcEEEEEEeecc--ccchHHHHHHHHHcCCCc--eeecceeeeec-CCCCceeEEEEec
Q 018619 15 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--RRYKNRELQLMRVMDHPN--VISLKHCFFST-TSKNELFLNLVME 89 (353)
Q Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~E~~~l~~l~h~~--iv~~~~~~~~~-~~~~~~~~~lv~e 89 (353)
-.+.++.|....+|++.. ++..+++|+.... ......|..+++.|.... +.+++...-.. ........+++++
T Consensus 26 ~i~~~~~G~~n~~y~v~t--~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e 103 (307)
T TIGR00938 26 SLKGIAEGVENSNYLLTT--DVGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE 103 (307)
T ss_pred eccccCCccccceEEEEe--CCCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence 356677787789998864 3446888977543 233446777777774322 23332211000 0011234678999
Q ss_pred cccchH------------HHHHHhhhhcCCCCC-------HHHHH----------------HHHHHHHHHHHHhHc----
Q 018619 90 YVPESM------------YRVLKHYSSANQRMP-------LIYVK----------------LYTYQIFRGLAYIHT---- 130 (353)
Q Consensus 90 ~~~~~l------------~~~l~~~~~~~~~l~-------~~~~~----------------~i~~qll~al~~LH~---- 130 (353)
|++|.. ...+...-.....++ ....+ .....+...++++..
T Consensus 104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~ 183 (307)
T TIGR00938 104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR 183 (307)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence 987621 011111000000000 00000 001112234444432
Q ss_pred --CCCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 131 --VPRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 131 --~~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
..+++|+|+++.||+++. ++.+.|+||+.+.
T Consensus 184 ~~~~~l~HgD~~~~Nvl~~~-~~~~~vIDfd~~~ 216 (307)
T TIGR00938 184 DLPRGVIHADLFPDNVLFDG-DSVKGVIDFYFAC 216 (307)
T ss_pred cCCCccCCCCCCcCcEEEEC-CceEEEeeccccc
Confidence 158999999999999986 5656899999875
No 480
>PLN02236 choline kinase
Probab=97.34 E-value=0.0048 Score=56.02 Aligned_cols=30 Identities=33% Similarity=0.617 Sum_probs=26.4
Q ss_pred CeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 133 RVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 133 ~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.++|+|+++.||+++..++.+.++||..|.
T Consensus 201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 689999999999998645679999999885
No 481
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.22 E-value=0.00036 Score=61.06 Aligned_cols=135 Identities=16% Similarity=0.150 Sum_probs=88.3
Q ss_pred eeeEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc--------------------------ccchHHHHHHHHHcC-CC
Q 018619 12 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--------------------------RRYKNRELQLMRVMD-HP 64 (353)
Q Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------------------------~~~~~~E~~~l~~l~-h~ 64 (353)
-|.++..||-|--+.||.+-+ ..|++.++|.-.-. +....+|...|+.|. |.
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 578889999999999999885 57888888833100 111236888888874 32
Q ss_pred c-eeecceeeeecCCCCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCc
Q 018619 65 N-VISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQN 143 (353)
Q Consensus 65 ~-iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~N 143 (353)
. +.+.++ ....++|||++.|--+..+.+ ... +..+...++.-+.-|-. +|+||+|..--|
T Consensus 172 fpVPkpiD---------~~RH~Vvmelv~g~Pl~~v~~------v~d---~~~ly~~lm~~Iv~la~-~GlIHgDFNEFN 232 (465)
T KOG2268|consen 172 FPVPKPID---------HNRHCVVMELVDGYPLRQVRH------VED---PPTLYDDLMGLIVRLAN-HGLIHGDFNEFN 232 (465)
T ss_pred CCCCCccc---------ccceeeHHHhhcccceeeeee------cCC---hHHHHHHHHHHHHHHHH-cCceecccchhe
Confidence 2 222222 223679999998732111111 111 23344455555667777 799999999999
Q ss_pred EEEeCCCCcEEEeeeccccccccC
Q 018619 144 LLVDPLTHQVKICDFGSAKQLIAG 167 (353)
Q Consensus 144 ill~~~~~~vkl~Dfg~a~~~~~~ 167 (353)
|+++. ++.++++||--+...+..
T Consensus 233 imv~d-d~~i~vIDFPQmvS~sh~ 255 (465)
T KOG2268|consen 233 IMVKD-DDKIVVIDFPQMVSTSHP 255 (465)
T ss_pred eEEec-CCCEEEeechHhhccCCC
Confidence 99995 778999999866544433
No 482
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.16 E-value=0.0078 Score=54.25 Aligned_cols=69 Identities=25% Similarity=0.268 Sum_probs=42.3
Q ss_pred eeecCCCeEEEEEEECCCCcEEEEEEeecc-----------ccchHHHHHHHHHcC--CC-ceeecceeeeecCCCCcee
Q 018619 18 VVGTGSFGIVFQAKCLETGETVAIKKVLQD-----------RRYKNRELQLMRVMD--HP-NVISLKHCFFSTTSKNELF 83 (353)
Q Consensus 18 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~E~~~l~~l~--h~-~iv~~~~~~~~~~~~~~~~ 83 (353)
.+|.|....||++.....++.++||.-... ..+..-|...|+... -| .+.+++. ++.. .
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e-----~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTE-----M 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--Eccc-----c
Confidence 579999999999997543468999955311 122235777777653 23 3444432 1211 1
Q ss_pred EEEEeccccc
Q 018619 84 LNLVMEYVPE 93 (353)
Q Consensus 84 ~~lv~e~~~~ 93 (353)
..+|||+++.
T Consensus 75 ~~~vMEdL~~ 84 (370)
T TIGR01767 75 AVTVMEDLSH 84 (370)
T ss_pred ceehHhhCcc
Confidence 4489999963
No 483
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.09 E-value=0.014 Score=51.89 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=33.4
Q ss_pred eeeeecCCCeEEEEEEECC------CCcEEEEEEeeccc---cchHHHHHHHHHcCC
Q 018619 16 ERVVGTGSFGIVFQAKCLE------TGETVAIKKVLQDR---RYKNRELQLMRVMDH 63 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~---~~~~~E~~~l~~l~h 63 (353)
++.+..|-...+|++.... +++.|++|+..... ....+|..+++.+..
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~ 59 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSE 59 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHh
Confidence 3556677778999887533 26789999876542 234678888888854
No 484
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.04 E-value=0.0095 Score=53.79 Aligned_cols=29 Identities=24% Similarity=0.371 Sum_probs=25.6
Q ss_pred eeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 134 VCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 134 i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+|.|+.+.||++++.++.++++||..|.
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 68999999999998545789999999885
No 485
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.00 E-value=0.012 Score=52.29 Aligned_cols=29 Identities=31% Similarity=0.609 Sum_probs=25.7
Q ss_pred eeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 134 VCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 134 i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
++|+|+++.|++++. +.-+-+.||+.+..
T Consensus 200 lvHGD~~~gNlii~~-~~~~gVlDwe~~~l 228 (321)
T COG3173 200 LVHGDYRPGNLIIDP-GRPTGVLDWELATL 228 (321)
T ss_pred eeeCCcccCCEEEeC-CCeeEEEecccccc
Confidence 899999999999997 44599999999874
No 486
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.96 E-value=0.017 Score=51.56 Aligned_cols=29 Identities=28% Similarity=0.558 Sum_probs=25.1
Q ss_pred CCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 132 PRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 132 ~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~--~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD--NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC--CcEEEEECcccc
Confidence 48899999999999985 458999999764
No 487
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.93 E-value=0.009 Score=52.43 Aligned_cols=30 Identities=30% Similarity=0.504 Sum_probs=24.5
Q ss_pred CeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 133 RVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 133 ~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.++|+|++|.||+++.++...-|+||+.+.
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~ 215 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK 215 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence 589999999999998522335699999886
No 488
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.83 E-value=0.011 Score=53.90 Aligned_cols=71 Identities=17% Similarity=0.212 Sum_probs=44.7
Q ss_pred eeeeecCCCeEEEEEEECCCCcEEEEEEeecc----------ccchHHHHHHHHHcC--CC-ceeecceeeeecCCCCce
Q 018619 16 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----------RRYKNRELQLMRVMD--HP-NVISLKHCFFSTTSKNEL 82 (353)
Q Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~~E~~~l~~l~--h~-~iv~~~~~~~~~~~~~~~ 82 (353)
.+.||.|.-..||++.+...++.++||.-... ..+..-|...|+... .| .+.+++.+ +..
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e----- 106 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSV----- 106 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcH-----
Confidence 67889999999999997434568999955211 122345788887663 23 44444331 211
Q ss_pred eEEEEeccccc
Q 018619 83 FLNLVMEYVPE 93 (353)
Q Consensus 83 ~~~lv~e~~~~ 93 (353)
...+|||+++.
T Consensus 107 ~~~~vMEdL~~ 117 (409)
T PRK12396 107 MNCCVMEDLSD 117 (409)
T ss_pred HhhHHHHhCcc
Confidence 14488999863
No 489
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.71 E-value=0.025 Score=52.06 Aligned_cols=70 Identities=19% Similarity=0.247 Sum_probs=44.5
Q ss_pred EeeeeecCCCeEEEEEEECCCCcEEEEEEeec-----------cccchHHHHHHHHHcC---CCceeecceeeeecCCCC
Q 018619 15 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----------DRRYKNRELQLMRVMD---HPNVISLKHCFFSTTSKN 80 (353)
Q Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----------~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~ 80 (353)
..+.||.|....||++.+ .+..|+||.-.. ...+...|...|+.+. ..++.+++.+. ++
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~d-----ed 108 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFD-----RT 108 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEEC-----CC
Confidence 467889999999999986 345789996641 2222345677776653 23555555433 21
Q ss_pred ceeEEEEeccccc
Q 018619 81 ELFLNLVMEYVPE 93 (353)
Q Consensus 81 ~~~~~lv~e~~~~ 93 (353)
. .+++||++++
T Consensus 109 ~--~vlvME~L~~ 119 (418)
T PLN02756 109 M--ALIGMRYLEP 119 (418)
T ss_pred C--CEEEEeecCC
Confidence 1 4478999975
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.49 E-value=0.044 Score=49.00 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=26.6
Q ss_pred CCeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 132 PRVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 132 ~~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
.+++|+|+.++|++++. ++.+.++||..+.
T Consensus 196 ~~lcHgD~~~~Nvl~~~-~~~~~iIDfd~~~ 225 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDE-TRGGYFINFEKAS 225 (309)
T ss_pred eeeeCCCCcHHhEEEcC-CCCEEEEEhhhcc
Confidence 47999999999999986 6679999999886
No 491
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.88 E-value=0.068 Score=47.08 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=42.3
Q ss_pred eEeeeeecCCCeEEEEEEECCCCcEEEEEEeecc-ccchHHHHHHHHHcC---CCceeecceeeeecCCCCceeEEEEec
Q 018619 14 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRVMD---HPNVISLKHCFFSTTSKNELFLNLVME 89 (353)
Q Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~lv~e 89 (353)
.-.+.++.|....+|.+. .+++.|.+|+-... ...+..|..-|+.|. --.+.+++.+... .+. -++|||
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~---~~~--~fLlle 92 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEY---DDD--AFLLLE 92 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE----SSC--CEEEEE
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEee---cCC--ceEEEE
Confidence 445678889999999887 67889999977643 345678999888884 2234444443311 111 369999
Q ss_pred ccc
Q 018619 90 YVP 92 (353)
Q Consensus 90 ~~~ 92 (353)
|++
T Consensus 93 ~l~ 95 (288)
T PF03881_consen 93 FLE 95 (288)
T ss_dssp ---
T ss_pred eec
Confidence 986
No 492
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.84 E-value=0.033 Score=49.94 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=56.9
Q ss_pred CCceeEEEEeccccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeCCCCcEEEeee
Q 018619 79 KNELFLNLVMEYVPESMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDF 158 (353)
Q Consensus 79 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~~~~~vkl~Df 158 (353)
....+.|++|++-.+.+.. + ..-..+++..++.+.+.-+.-+...-..-|||+..+|||++ .|+|.|+||
T Consensus 296 de~~y~yl~~kdhgt~is~-i-------k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId--~GnvtLIDf 365 (488)
T COG5072 296 DETLYLYLHFKDHGTPISI-I-------KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID--EGNVTLIDF 365 (488)
T ss_pred CCceEEEEEEecCCceeee-e-------ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee--cCceEEEEe
Confidence 4456788999987765321 1 22345677788888777777777633578999999999999 578999999
Q ss_pred cccccc
Q 018619 159 GSAKQL 164 (353)
Q Consensus 159 g~a~~~ 164 (353)
-+|+..
T Consensus 366 klsRl~ 371 (488)
T COG5072 366 KLSRLS 371 (488)
T ss_pred eeeecc
Confidence 999843
No 493
>PTZ00384 choline kinase; Provisional
Probab=95.53 E-value=0.31 Score=44.93 Aligned_cols=28 Identities=32% Similarity=0.370 Sum_probs=23.7
Q ss_pred CeeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 133 RVCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 133 ~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
..+|.|+-+.||+.+. +.+.++||..|.
T Consensus 228 VfCHNDL~~gNIL~~~--~~l~lID~EYA~ 255 (383)
T PTZ00384 228 LFCHNDLFFTNILDFN--QGIYFIDFDFAG 255 (383)
T ss_pred eeeeccCCcccEEecC--CCEEEEEecccc
Confidence 5789999999999863 459999998874
No 494
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=95.30 E-value=0.053 Score=50.38 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=23.9
Q ss_pred eeeccCCCCcEEEeCCCC----cEEEeeeccccc
Q 018619 134 VCHRDLKPQNLLVDPLTH----QVKICDFGSAKQ 163 (353)
Q Consensus 134 i~H~Dlkp~Nill~~~~~----~vkl~Dfg~a~~ 163 (353)
++|+||...|||.+.+++ -..|+||-.+..
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~ 303 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHR 303 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhc
Confidence 799999999999987443 467788887653
No 495
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.13 E-value=0.057 Score=49.20 Aligned_cols=60 Identities=30% Similarity=0.328 Sum_probs=38.2
Q ss_pred EEEEeccccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCeeeccCCCCcEEEeC
Q 018619 84 LNLVMEYVPE-SMYRVLKHYSSANQRMPLIYVKLYTYQIFRGLAYIHTVPRVCHRDLKPQNLLVDP 148 (353)
Q Consensus 84 ~~lv~e~~~~-~l~~~l~~~~~~~~~l~~~~~~~i~~qll~al~~LH~~~~i~H~Dlkp~Nill~~ 148 (353)
..++-+|..| ++...+.. ...++...+.++.-...|+--|--..+.+|.|++|.||++--
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~-----~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKW-----KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF 380 (565)
T ss_pred ceeeeeccccccHHhhhhc-----ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence 4466667766 44444432 344555566666666666554443369999999999999953
No 496
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=94.27 E-value=0.062 Score=47.79 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=45.1
Q ss_pred EEeccccchHHHHHHhh-hhcCCCCCHHHHHHHHHHHHHHHH---HhHcCCCeeeccCCCCcEEEeCCC-----------
Q 018619 86 LVMEYVPESMYRVLKHY-SSANQRMPLIYVKLYTYQIFRGLA---YIHTVPRVCHRDLKPQNLLVDPLT----------- 150 (353)
Q Consensus 86 lv~e~~~~~l~~~l~~~-~~~~~~l~~~~~~~i~~qll~al~---~LH~~~~i~H~Dlkp~Nill~~~~----------- 150 (353)
+|+++..++-.+.-... ..-+-..-.+.++.++.|++.-.- .|-...+.+|-||||+|||+-+.+
T Consensus 248 IIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~ 327 (434)
T PF05445_consen 248 IIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRN 327 (434)
T ss_pred EEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeE
Confidence 78887765432221111 111222334556778888765431 122225789999999999994322
Q ss_pred ------CcEEEeeeccccc
Q 018619 151 ------HQVKICDFGSAKQ 163 (353)
Q Consensus 151 ------~~vkl~Dfg~a~~ 163 (353)
-.++|.||.+|..
T Consensus 328 ~vF~Epi~~~LnDFDfSqv 346 (434)
T PF05445_consen 328 YVFKEPIRCCLNDFDFSQV 346 (434)
T ss_pred EEecccceeeecccCHHHh
Confidence 2467778887764
No 497
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=94.17 E-value=0.087 Score=47.31 Aligned_cols=29 Identities=38% Similarity=0.544 Sum_probs=24.9
Q ss_pred eeeccCCCCcEEEeCCCCcEEEeeecccc
Q 018619 134 VCHRDLKPQNLLVDPLTHQVKICDFGSAK 162 (353)
Q Consensus 134 i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~ 162 (353)
+||+|+.|+||+++.++..+.++||+-|.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEccccc
Confidence 99999999999999633358999999875
No 498
>PRK10271 thiK thiamine kinase; Provisional
Probab=93.93 E-value=0.052 Score=44.30 Aligned_cols=29 Identities=21% Similarity=0.338 Sum_probs=24.7
Q ss_pred CeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 133 RVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 133 ~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
-.+|+|+.|+|++++. ++ ++|+||+.|..
T Consensus 78 ~p~H~D~~~~N~~~~~-~~-~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSA-SG-LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEEC-CC-EEEEeCCcccC
Confidence 3589999999999985 55 99999999863
No 499
>PTZ00296 choline kinase; Provisional
Probab=93.93 E-value=1.1 Score=42.12 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=33.3
Q ss_pred EeeeeecCCCeEEEEEEECC--------CCcEEEEEEeeccccc---hHHHHHHHHHcCC
Q 018619 15 AERVVGTGSFGIVFQAKCLE--------TGETVAIKKVLQDRRY---KNRELQLMRVMDH 63 (353)
Q Consensus 15 ~~~~lg~G~~g~V~~~~~~~--------~~~~vaiK~~~~~~~~---~~~E~~~l~~l~h 63 (353)
-++.|..|-.-.+|++.... .++.|.+|+....... ...|..+++.+..
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~ 168 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSK 168 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHH
Confidence 56677778888899987542 1568999987554322 3468888877754
No 500
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=93.93 E-value=0.12 Score=45.20 Aligned_cols=50 Identities=24% Similarity=0.335 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHhHcCC--CeeeccCCCCcEEEeCCCCcEEEeeeccccc
Q 018619 112 IYVKLYTYQIFRGLAYIHTVP--RVCHRDLKPQNLLVDPLTHQVKICDFGSAKQ 163 (353)
Q Consensus 112 ~~~~~i~~qll~al~~LH~~~--~i~H~Dlkp~Nill~~~~~~vkl~Dfg~a~~ 163 (353)
...+..+..+-.++.-.+. . -++|+|+.|+|++.++ .+.++|+||..|..
T Consensus 132 ~~~~~~~~~l~~~l~~~~~-~~~v~cH~Dl~~~N~l~t~-~~~l~LIDWEyAg~ 183 (269)
T COG0510 132 HLLRKKLKELRRALEEVPK-DDLVPCHNDLNPGNLLLTD-KGGLFLIDWEYAGL 183 (269)
T ss_pred HHHHHHHHHHHHHhhhcCC-CceeeecCCCCccceEEcC-CCcEEEEecccCCC
Confidence 3344455566666666665 3 4899999999999995 67899999998864
Done!