BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018626
(353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2
SV=2
Length = 297
Score = 211 bits (537), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 132/184 (71%), Gaps = 12/184 (6%)
Query: 91 ELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTGVPTIEVPYDQSNR--GVVDTPKRS 148
+LTLSF+G+VYVF V+PEKVQAVLLLLGGR++P +PT Q+NR G+ TP+R
Sbjct: 79 QLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRL 138
Query: 149 NLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASLKES-----SGASP 203
++ +R+ASL+RFREKRK R FDK IRY+VRKEVA RM RK GQF S K S S S
Sbjct: 139 SVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSD 198
Query: 204 WDSSQDGIQDG--TPRPETVVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKET 261
W S+Q +G T +PE + C+HCG SE +TP MRRGP GPRTLCNACGLMWANK T
Sbjct: 199 WGSNQSWAVEGTETQKPEVL---CRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGT 255
Query: 262 PMDV 265
D+
Sbjct: 256 LRDL 259
>sp|Q8H1G0|GAT28_ARATH GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2
SV=1
Length = 302
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 131/193 (67%), Gaps = 10/193 (5%)
Query: 81 VVVAAASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTGVPTIEVPYDQSNR- 139
VV + + +LTLSF+G+VYVF +V PEKVQAVLLLLGGR++P P Q+NR
Sbjct: 73 VVDRGSEQGDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRV 132
Query: 140 -GVVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASLKE- 197
+ TP+R ++ +R+ASLVRFREKRK R FDKKIRY+VRKEVA RM R GQF S K
Sbjct: 133 SSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSN 192
Query: 198 ----SSGASPWDSSQD-GIQDGTPRPETVVRRCQHCGVSENNTPAMRRGPAGPRTLCNAC 252
+S S W S+Q I+ + + + C+HCG+ E +TP MRRGPAGPRTLCNAC
Sbjct: 193 NDEAASAGSSWGSNQTWAIESSEAQHQEI--SCRHCGIGEKSTPMMRRGPAGPRTLCNAC 250
Query: 253 GLMWANKETPMDV 265
GLMWANK D+
Sbjct: 251 GLMWANKGAFRDL 263
>sp|Q9LRH6|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2
SV=2
Length = 309
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 126/204 (61%), Gaps = 6/204 (2%)
Query: 91 ELTLSFEGEVYVFPAVTPEKVQAVLLLLGGR-DIPTGVPTIEVPYDQSNRGVVDTPKRSN 149
+LT+SF G+VYVF AV +KV AVL LLGG ++ G +E+ Q++ VV+ R +
Sbjct: 83 QLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCS 142
Query: 150 LSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASLKESSGASPWDSSQD 209
L +R SL RFR+KR RCF+KK+RY VR+EVA RM R GQF S K + GA + QD
Sbjct: 143 LPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQD 202
Query: 210 GIQDGTPRPETVVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPSI 269
QD PE C HCG+S TP MRRGP+GPRTLCNACGL WAN+ T D+
Sbjct: 203 SAQDDA-HPEI---SCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKT 258
Query: 270 MEGEFSGNQ-DELGTPEDPAKAVN 292
E + + + D+ G+ D A +N
Sbjct: 259 EENQLALMKPDDGGSVADAANNLN 282
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 150 LSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFA 193
+S+R A+L +FR+KRKERCF KK+RY RK++A++ R GQF
Sbjct: 666 ISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFV 709
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 146 KRSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFA 193
+R + S+R A+L++FR KRK+RCFDKK+RY RK++A++ R GQF
Sbjct: 410 QRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFV 457
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 152 RRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFA 193
RR A+L +FR KRKERCFDKK+RY RK++A+ R GQF
Sbjct: 442 RRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFV 483
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 150 LSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFA 193
L RR +L++FR KR +RCFDKKIRY RK +A+R R GQF
Sbjct: 530 LDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFV 573
>sp|Q55C49|GTAG_DICDI GATA zinc finger domain-containing protein 7 OS=Dictyostelium
discoideum GN=gtaG PE=4 SV=1
Length = 1006
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 225 CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKE 260
C +CG NTP RRGP+GP TLCNACGL +A K+
Sbjct: 842 CHNCGTK--NTPEWRRGPSGPATLCNACGLAYAKKQ 875
>sp|Q8L4M6|GATA3_ARATH GATA transcription factor 3 OS=Arabidopsis thaliana GN=GATA3 PE=2
SV=2
Length = 269
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 217 RPETVV---RRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
+ ETV+ RRC HCG NNTP R GP GP+TLCNACG+ + + + +P+
Sbjct: 171 KQETVLVFQRRCSHCGT--NNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPA 223
>sp|B0G188|GTAP_DICDI GATA zinc finger domain-containing protein 16 OS=Dictyostelium
discoideum GN=gtaP PE=4 SV=1
Length = 695
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 225 CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWA 257
C CGV+ NTP RRGP G +TLCNACGL WA
Sbjct: 479 CHTCGVT--NTPEWRRGPNGAKTLCNACGLAWA 509
>sp|P40209|GAT2_YEAST Protein GAT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAT2 PE=4 SV=1
Length = 560
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 216 PRPETVVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMW 256
P + ++ C HCG +E TP R+GP G RTLCNACGL +
Sbjct: 463 PNAKKIIEFCFHCGETE--TPEWRKGPYGTRTLCNACGLFY 501
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 149 NLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFA 193
+LS+R A+L +FR KRK+RCF+KK+RY RK +A++ R GQF
Sbjct: 570 HLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFV 614
>sp|Q00858|CGPB_FUSSO Cutinase gene palindrome-binding protein OS=Fusarium solani subsp.
pisi PE=2 SV=1
Length = 457
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 225 CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKE 260
C CG + +P R+GP+GP+TLCNACGL WA KE
Sbjct: 402 CTDCGTLD--SPEWRKGPSGPKTLCNACGLRWAKKE 435
>sp|Q8LAU9|GATA1_ARATH GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2
SV=2
Length = 274
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 223 RRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
R+CQHCG + TP R GPAGP+TLCNACG+ + + + +P+
Sbjct: 194 RKCQHCGAEK--TPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPA 237
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%), Gaps = 2/44 (4%)
Query: 150 LSRRIASLVRFREKRKERCFDKKIRYSVRKEVA-QRMHRKNGQF 192
++R A+L++FR KRKERCF+KK+RY RK++A QR H K GQF
Sbjct: 439 WAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVK-GQF 481
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 152 RRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASLKESSGA 201
+R A+L +FR KRK+RC++KK+RY RK++A++ R GQF +S+ A
Sbjct: 508 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQSTQA 557
>sp|Q55GK0|GTAE_DICDI GATA zinc finger domain-containing protein 5 OS=Dictyostelium
discoideum GN=gtaE PE=4 SV=1
Length = 952
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 224 RCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKE 260
+C C S NTP R+GP GP TLCNACGL +A K+
Sbjct: 240 KCYQCNTS--NTPEWRKGPEGPATLCNACGLAYAKKQ 274
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 153 RIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQF 192
R+A++++FR+KRKER F KK+RY RK +A++ R GQF
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQF 721
>sp|Q550D5|GTAA_DICDI Transcription factor stalky OS=Dictyostelium discoideum GN=stkA
PE=1 SV=1
Length = 872
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 218 PETVVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
P + R C+ CG S+ TP RRGP+G +LCNACG+ W K KPS
Sbjct: 287 PMSAPRSCEFCGSSQ--TPTWRRGPSGKGSLCNACGIKWRLKGKDGIFKPS 335
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 153 RIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQF 192
R+A++++FR+KRKER F KK+RY RK +A++ R GQF
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQF 721
>sp|Q6DBP8|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2
SV=1
Length = 303
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 221 VVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMW 256
+VR+C HC ++ TP R GP+GP+TLCNACG+ +
Sbjct: 218 IVRKCTHCETTK--TPQWREGPSGPKTLCNACGVRF 251
>sp|Q9SV30|GATA8_ARATH GATA transcription factor 8 OS=Arabidopsis thaliana GN=GATA8 PE=2
SV=1
Length = 322
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 222 VRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
+R+C HC V++ TP R GP GP+TLCNACG+ + + + +P+
Sbjct: 228 LRKCMHCEVTK--TPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPA 272
>sp|P69781|GAT12_ARATH GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2
SV=1
Length = 331
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 223 RRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
RRC HC + TP R GP GP+TLCNACG+ + + + +P+
Sbjct: 219 RRCLHCAT--DKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA 262
>sp|O82632|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2
SV=1
Length = 308
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 223 RRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
RRC HC + TP R GP GP+TLCNACG+ + + + +P+
Sbjct: 197 RRCLHCATEK--TPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA 240
>sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-1
PE=2 SV=2
Length = 1167
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 221 VVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANK 259
+VR C +C NTP RRGP+G R LCN+CGL WA +
Sbjct: 930 MVRDCANC--HTRNTPEWRRGPSGNRDLCNSCGLRWAKQ 966
>sp|Q9FH57|GATA5_ARATH GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2
SV=1
Length = 339
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 223 RRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPSI 269
R+C HCGV TP R GP G +TLCNACG+ + + + +P+
Sbjct: 249 RKCSHCGV--QKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPAC 293
>sp|P78714|WC2_NEUCR White collar 2 protein OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-2
PE=1 SV=1
Length = 530
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 225 CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWA 257
C CG + +P R+GP+GP+TLCNACGL WA
Sbjct: 468 CTDCGTLD--SPEWRKGPSGPKTLCNACGLRWA 498
>sp|O49741|GATA2_ARATH GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2
SV=1
Length = 264
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 222 VRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
+RRC HC + TP R GP GP+TLCNACG+ + + + +P+
Sbjct: 178 MRRCTHC--ASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPA 222
>sp|Q8VZP4|GAT10_ARATH GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2
SV=1
Length = 308
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 221 VVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
+VR C HC TP R+GP+GP+TLCNACG+ + + + +P+
Sbjct: 216 IVRICTHC--ETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPA 261
>sp|Q9SD38|GATA6_ARATH GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2
SV=1
Length = 312
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 223 RRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPSI 269
R+C HCGV + TP R GP G +TLCNACG+ + + + +P+
Sbjct: 221 RQCGHCGVQK--TPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPAC 265
>sp|O49743|GATA4_ARATH GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2
SV=1
Length = 240
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 222 VRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
RRC HC TP R GP GP+TLCNACG+ + + + +P+
Sbjct: 157 ARRCTHCA--SEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPA 201
>sp|Q8W4H1|GAT26_ARATH GATA transcription factor 26 OS=Arabidopsis thaliana GN=GATA26 PE=2
SV=1
Length = 510
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 225 CQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPSIMEGEFSGNQDELGTP 284
C HCGV+ NTP R GP LCNACG W K T ++ P + G++++
Sbjct: 7 CYHCGVT--NTPLWRNGPPEKPVLCNACGSRWRTKGTLVNYTP--LHARADGDENDDHHR 62
Query: 285 EDPAKAVNQGSDNPSI 300
K+++ G+ N I
Sbjct: 63 FQRMKSISLGNKNKEI 78
>sp|O65515|GATA7_ARATH GATA transcription factor 7 OS=Arabidopsis thaliana GN=GATA7 PE=2
SV=1
Length = 238
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 209 DGIQDGTPRPETVVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKETPMDVKPS 268
D G + + + R C HCGV TP R GP G +TLCNACG+ + + + +P+
Sbjct: 150 DASYGGVVQQQQLRRCCSHCGV--QKTPQWRMGPLGAKTLCNACGVRFKSGRLLPEYRPA 207
Query: 269 I 269
Sbjct: 208 C 208
>sp|Q8LC79|GAT18_ARATH GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2
SV=2
Length = 295
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 221 VVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKE 260
+ RRC +C + +TP R GP GP++LCNACG+ + +E
Sbjct: 150 LARRCANCDTT--STPLWRNGPRGPKSLCNACGIRFKKEE 187
>sp|Q10134|FEP1_SCHPO Iron-sensing transcription factor 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fep1 PE=1 SV=1
Length = 564
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 198 SSGASPWDSSQDGIQDGTPRPETVVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWA 257
S+G S SS + +D +P E V CQ+C + NTP RR +G +CNACGL +
Sbjct: 145 SNGTSRRRSSHNQHEDSSPPHEPSVTFCQNCATT--NTPLWRRDESG-NPICNACGLYYK 201
Query: 258 --NKETPMDVKPSIMEGE----FSGNQDE 280
P+ +K +I++ F+GN +E
Sbjct: 202 IHGVHRPVTMKKAIIKRRKRLVFNGNANE 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,448,019
Number of Sequences: 539616
Number of extensions: 7012254
Number of successful extensions: 126100
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 31650
Number of HSP's gapped (non-prelim): 40516
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)