Query 018627
Match_columns 353
No_of_seqs 123 out of 1430
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 02:41:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018627.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018627hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 9E-60 2E-64 423.2 30.0 339 11-352 1-342 (366)
2 KOG0022 Alcohol dehydrogenase, 100.0 4.7E-59 1E-63 412.0 30.7 345 8-352 3-351 (375)
3 COG1064 AdhP Zn-dependent alco 100.0 5.6E-59 1.2E-63 426.7 29.6 303 10-346 1-308 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 1E-57 2.2E-62 406.5 27.5 313 12-352 4-326 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 3.8E-52 8.3E-57 369.9 27.3 314 7-344 4-324 (360)
6 PLN02827 Alcohol dehydrogenase 100.0 3.1E-51 6.7E-56 392.6 35.9 350 2-351 2-351 (378)
7 PLN02740 Alcohol dehydrogenase 100.0 5.2E-51 1.1E-55 391.7 34.2 346 5-350 3-355 (381)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 2.6E-50 5.7E-55 385.6 35.7 335 13-351 1-347 (371)
9 TIGR02818 adh_III_F_hyde S-(hy 100.0 5E-50 1.1E-54 383.2 35.6 338 13-351 2-343 (368)
10 cd08300 alcohol_DH_class_III c 100.0 1.5E-49 3.4E-54 379.9 35.7 339 12-351 2-344 (368)
11 cd08301 alcohol_DH_plants Plan 100.0 1.6E-49 3.4E-54 380.0 35.6 339 12-350 2-344 (369)
12 cd08277 liver_alcohol_DH_like 100.0 5.5E-49 1.2E-53 375.7 35.5 337 12-350 2-340 (365)
13 TIGR03451 mycoS_dep_FDH mycoth 100.0 3.6E-49 7.7E-54 376.0 33.5 328 12-350 1-332 (358)
14 cd08239 THR_DH_like L-threonin 100.0 6.9E-48 1.5E-52 364.4 32.9 308 13-350 1-313 (339)
15 PRK09880 L-idonate 5-dehydroge 100.0 7.1E-47 1.5E-51 358.2 32.2 307 11-350 3-316 (343)
16 COG1063 Tdh Threonine dehydrog 100.0 9.3E-47 2E-51 357.1 31.6 315 13-351 1-323 (350)
17 COG0604 Qor NADPH:quinone redu 100.0 5.4E-46 1.2E-50 347.8 30.2 283 13-345 1-295 (326)
18 TIGR02819 fdhA_non_GSH formald 100.0 7.7E-46 1.7E-50 356.4 31.5 316 12-350 2-363 (393)
19 PRK10309 galactitol-1-phosphat 100.0 6.6E-45 1.4E-49 345.2 33.4 311 13-351 1-320 (347)
20 PLN02586 probable cinnamyl alc 100.0 4.7E-45 1E-49 347.8 32.2 318 1-345 1-324 (360)
21 cd08299 alcohol_DH_class_I_II_ 100.0 4.4E-44 9.5E-49 342.7 36.0 340 9-350 4-347 (373)
22 TIGR03201 dearomat_had 6-hydro 100.0 2.3E-44 5.1E-49 341.8 31.8 304 16-349 2-322 (349)
23 cd08230 glucose_DH Glucose deh 100.0 2.3E-44 5E-49 342.6 30.8 306 13-350 1-330 (355)
24 cd05279 Zn_ADH1 Liver alcohol 100.0 6.5E-43 1.4E-47 333.8 35.2 334 14-349 2-339 (365)
25 cd08233 butanediol_DH_like (2R 100.0 4.7E-43 1E-47 333.0 33.0 307 13-350 1-323 (351)
26 PLN02178 cinnamyl-alcohol dehy 100.0 3.7E-43 8.1E-48 336.1 32.1 304 15-345 9-319 (375)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.8E-42 6E-47 324.9 30.5 291 15-344 1-300 (329)
28 cd08231 MDR_TM0436_like Hypoth 100.0 1.3E-41 2.8E-46 324.3 34.2 318 14-349 2-334 (361)
29 PLN02514 cinnamyl-alcohol dehy 100.0 8.2E-42 1.8E-46 325.2 32.7 306 12-344 9-320 (357)
30 cd08278 benzyl_alcohol_DH Benz 100.0 1.2E-41 2.7E-46 325.0 33.4 331 11-346 1-337 (365)
31 cd08237 ribitol-5-phosphate_DH 100.0 2.5E-42 5.4E-47 326.8 27.1 292 12-351 2-311 (341)
32 KOG1197 Predicted quinone oxid 100.0 7.3E-42 1.6E-46 294.3 24.5 285 7-345 3-300 (336)
33 cd08279 Zn_ADH_class_III Class 100.0 1.3E-40 2.8E-45 317.8 35.1 332 13-348 1-336 (363)
34 cd08285 NADP_ADH NADP(H)-depen 100.0 1.2E-40 2.6E-45 316.5 33.9 312 13-349 1-321 (351)
35 cd08296 CAD_like Cinnamyl alco 100.0 5.2E-40 1.1E-44 310.0 32.6 299 13-344 1-304 (333)
36 cd05284 arabinose_DH_like D-ar 100.0 7.4E-40 1.6E-44 309.4 32.4 300 13-344 1-310 (340)
37 PRK10083 putative oxidoreducta 100.0 7.2E-40 1.6E-44 309.5 32.2 302 13-348 1-307 (339)
38 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.3E-39 2.9E-44 309.2 33.4 306 13-347 1-322 (350)
39 cd08238 sorbose_phosphate_red 100.0 9.5E-40 2.1E-44 316.5 32.3 302 11-351 1-343 (410)
40 cd05278 FDH_like Formaldehyde 100.0 2E-39 4.3E-44 307.2 32.3 308 13-346 1-315 (347)
41 TIGR01202 bchC 2-desacetyl-2-h 100.0 7.8E-40 1.7E-44 305.5 28.5 276 12-351 1-283 (308)
42 PLN02702 L-idonate 5-dehydroge 100.0 8.2E-39 1.8E-43 305.4 33.6 307 12-348 17-333 (364)
43 cd08283 FDH_like_1 Glutathione 100.0 8.6E-39 1.9E-43 307.6 33.7 323 13-348 1-356 (386)
44 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.3E-39 1.1E-43 305.0 31.4 306 13-346 1-321 (350)
45 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.6E-38 5.5E-43 299.7 33.8 308 13-347 1-315 (345)
46 TIGR03366 HpnZ_proposed putati 100.0 3.5E-39 7.6E-44 297.2 26.4 263 66-351 1-274 (280)
47 cd08286 FDH_like_ADH2 formalde 100.0 2.2E-38 4.8E-43 300.1 32.1 306 13-348 1-314 (345)
48 cd08246 crotonyl_coA_red croto 100.0 2E-38 4.3E-43 305.8 31.7 309 9-344 9-361 (393)
49 cd08263 Zn_ADH10 Alcohol dehyd 100.0 8.4E-38 1.8E-42 298.8 33.3 330 13-348 1-339 (367)
50 PRK05396 tdh L-threonine 3-deh 100.0 7.8E-38 1.7E-42 296.0 32.4 302 13-345 1-309 (341)
51 cd08284 FDH_like_2 Glutathione 100.0 1.2E-37 2.5E-42 294.9 32.8 308 13-347 1-315 (344)
52 cd08258 Zn_ADH4 Alcohol dehydr 100.0 3.6E-37 7.9E-42 287.3 32.9 297 13-340 1-306 (306)
53 cd08287 FDH_like_ADH3 formalde 100.0 2.2E-37 4.7E-42 293.2 31.7 305 13-348 1-317 (345)
54 cd08235 iditol_2_DH_like L-idi 100.0 4.4E-37 9.6E-42 290.8 33.4 303 13-345 1-313 (343)
55 cd08242 MDR_like Medium chain 100.0 2.4E-37 5.2E-42 289.8 30.9 292 13-349 1-292 (319)
56 cd08282 PFDH_like Pseudomonas 100.0 2.9E-37 6.2E-42 295.9 32.1 317 13-349 1-348 (375)
57 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3E-37 6.5E-42 296.7 32.2 307 13-348 29-357 (384)
58 PRK13771 putative alcohol dehy 100.0 1.4E-37 3.1E-42 293.0 29.4 296 13-344 1-302 (334)
59 cd08261 Zn_ADH7 Alcohol dehydr 100.0 8.7E-37 1.9E-41 288.3 33.8 298 13-344 1-303 (337)
60 PRK09422 ethanol-active dehydr 100.0 5.1E-37 1.1E-41 289.8 31.9 301 13-344 1-306 (338)
61 TIGR01751 crot-CoA-red crotony 100.0 5.6E-37 1.2E-41 296.2 32.0 309 9-344 4-356 (398)
62 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 9.7E-37 2.1E-41 287.4 32.6 303 13-345 1-309 (338)
63 cd08236 sugar_DH NAD(P)-depend 100.0 1.1E-36 2.5E-41 288.1 33.2 305 13-345 1-312 (343)
64 cd08297 CAD3 Cinnamyl alcohol 100.0 1.5E-36 3.2E-41 287.0 33.8 302 13-344 1-311 (341)
65 cd08262 Zn_ADH8 Alcohol dehydr 100.0 8.4E-37 1.8E-41 288.7 31.7 295 13-348 1-313 (341)
66 cd05283 CAD1 Cinnamyl alcohol 100.0 7.7E-37 1.7E-41 288.8 30.9 303 14-344 1-308 (337)
67 cd05285 sorbitol_DH Sorbitol d 100.0 1.6E-36 3.5E-41 287.2 31.7 301 15-346 1-311 (343)
68 cd05281 TDH Threonine dehydrog 100.0 2.6E-36 5.7E-41 285.6 32.3 306 13-348 1-313 (341)
69 cd08291 ETR_like_1 2-enoyl thi 100.0 1.2E-36 2.7E-41 285.8 29.7 277 13-344 1-294 (324)
70 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.3E-36 4.9E-41 283.8 30.1 291 13-341 1-296 (325)
71 cd08259 Zn_ADH5 Alcohol dehydr 100.0 7.8E-36 1.7E-40 280.4 32.3 297 13-344 1-302 (332)
72 cd08234 threonine_DH_like L-th 100.0 1.8E-35 3.8E-40 278.7 32.9 303 13-347 1-306 (334)
73 KOG0025 Zn2+-binding dehydroge 100.0 3.1E-36 6.7E-41 264.0 24.8 282 9-345 16-321 (354)
74 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.2E-35 4.8E-40 277.7 32.4 302 13-344 1-311 (342)
75 cd08294 leukotriene_B4_DH_like 100.0 1.1E-35 2.4E-40 279.4 30.1 279 12-349 2-303 (329)
76 cd08232 idonate-5-DH L-idonate 100.0 1.3E-35 2.8E-40 280.4 30.6 300 17-348 2-310 (339)
77 cd08292 ETR_like_2 2-enoyl thi 100.0 1.6E-35 3.6E-40 277.5 30.9 278 13-345 1-295 (324)
78 TIGR02825 B4_12hDH leukotriene 100.0 1.7E-35 3.7E-40 278.2 30.0 268 25-350 19-301 (325)
79 TIGR00692 tdh L-threonine 3-de 100.0 2.3E-35 5.1E-40 279.0 30.9 299 19-346 5-310 (340)
80 PLN03154 putative allyl alcoho 100.0 3.3E-35 7.2E-40 278.8 30.8 282 9-345 5-315 (348)
81 cd08295 double_bond_reductase_ 100.0 1.8E-35 3.8E-40 279.7 28.7 281 12-348 7-311 (338)
82 cd08298 CAD2 Cinnamyl alcohol 100.0 6E-35 1.3E-39 274.7 31.8 293 13-344 1-301 (329)
83 cd08245 CAD Cinnamyl alcohol d 100.0 5.9E-35 1.3E-39 274.8 31.7 297 14-344 1-302 (330)
84 cd08293 PTGR2 Prostaglandin re 100.0 1E-34 2.2E-39 275.0 30.0 271 25-349 23-319 (345)
85 cd08274 MDR9 Medium chain dehy 100.0 4.7E-34 1E-38 270.7 30.8 290 13-344 1-319 (350)
86 cd08290 ETR 2-enoyl thioester 100.0 6.1E-34 1.3E-38 269.1 28.9 282 13-347 1-310 (341)
87 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.9E-33 4.1E-38 265.1 29.4 277 14-345 1-302 (336)
88 cd08276 MDR7 Medium chain dehy 100.0 7.6E-33 1.6E-37 260.3 33.4 299 13-345 1-306 (336)
89 cd05188 MDR Medium chain reduc 100.0 2.5E-33 5.5E-38 255.1 27.7 266 39-337 1-271 (271)
90 PRK10754 quinone oxidoreductas 100.0 7E-33 1.5E-37 260.4 28.3 284 12-348 1-298 (327)
91 PTZ00354 alcohol dehydrogenase 100.0 3.1E-32 6.7E-37 256.1 31.9 279 12-344 1-297 (334)
92 cd08244 MDR_enoyl_red Possible 100.0 3.2E-32 7E-37 255.1 31.6 279 13-344 1-293 (324)
93 cd08250 Mgc45594_like Mgc45594 100.0 1.4E-32 3E-37 258.5 29.1 278 12-345 1-298 (329)
94 cd08249 enoyl_reductase_like e 100.0 2.6E-32 5.7E-37 258.1 26.7 285 13-349 1-310 (339)
95 cd08270 MDR4 Medium chain dehy 100.0 1.1E-31 2.4E-36 249.5 29.3 269 13-345 1-275 (305)
96 cd05282 ETR_like 2-enoyl thioe 100.0 1.3E-31 2.7E-36 251.0 29.1 267 25-345 14-294 (323)
97 cd08252 AL_MDR Arginate lyase 100.0 2.4E-31 5.2E-36 250.7 30.5 279 13-345 1-304 (336)
98 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.1E-31 6.6E-36 248.6 30.5 260 13-323 1-271 (325)
99 cd08269 Zn_ADH9 Alcohol dehydr 100.0 4.1E-31 8.9E-36 246.3 30.6 270 20-346 3-281 (312)
100 cd08243 quinone_oxidoreductase 100.0 3.7E-31 8E-36 247.0 29.0 281 13-345 1-291 (320)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 7.8E-31 1.7E-35 246.2 30.4 257 13-320 1-268 (326)
102 TIGR02823 oxido_YhdH putative 100.0 9.3E-31 2E-35 245.4 30.6 277 14-343 1-292 (323)
103 cd05288 PGDH Prostaglandin deh 100.0 7.5E-31 1.6E-35 246.6 29.2 279 13-349 2-305 (329)
104 cd05276 p53_inducible_oxidored 100.0 2.7E-30 5.9E-35 240.5 31.1 278 13-344 1-294 (323)
105 COG2130 Putative NADP-dependen 100.0 4.2E-31 9E-36 234.0 23.9 262 25-346 27-309 (340)
106 cd08248 RTN4I1 Human Reticulon 100.0 5.6E-31 1.2E-35 249.6 24.6 233 13-298 1-260 (350)
107 cd08253 zeta_crystallin Zeta-c 100.0 9.5E-30 2.1E-34 237.3 30.3 283 13-345 1-295 (325)
108 cd05286 QOR2 Quinone oxidoredu 100.0 1.7E-29 3.6E-34 234.9 31.5 278 14-345 1-290 (320)
109 KOG1198 Zinc-binding oxidoredu 100.0 1.3E-30 2.9E-35 244.4 23.4 271 25-348 20-318 (347)
110 cd08288 MDR_yhdh Yhdh putative 100.0 1.6E-29 3.5E-34 237.0 30.2 280 13-344 1-294 (324)
111 cd08272 MDR6 Medium chain dehy 100.0 1.5E-29 3.3E-34 236.3 29.3 278 13-344 1-294 (326)
112 cd08271 MDR5 Medium chain dehy 100.0 1.7E-29 3.7E-34 236.3 27.9 280 13-345 1-295 (325)
113 cd08273 MDR8 Medium chain dehy 100.0 1.9E-29 4.1E-34 237.1 27.8 275 14-345 2-302 (331)
114 TIGR02824 quinone_pig3 putativ 100.0 8.9E-29 1.9E-33 230.9 29.8 278 13-344 1-294 (325)
115 cd08268 MDR2 Medium chain dehy 100.0 1.7E-28 3.8E-33 229.2 30.6 284 13-345 1-298 (328)
116 cd08247 AST1_like AST1 is a cy 100.0 8E-29 1.7E-33 235.3 28.4 237 14-295 2-259 (352)
117 cd08251 polyketide_synthase po 100.0 1.4E-28 3.1E-33 227.4 28.9 262 32-345 2-275 (303)
118 cd08241 QOR1 Quinone oxidoredu 100.0 5.6E-28 1.2E-32 225.1 30.7 277 13-344 1-293 (323)
119 cd05289 MDR_like_2 alcohol deh 100.0 2E-28 4.4E-33 226.9 27.1 271 13-344 1-280 (309)
120 cd08275 MDR3 Medium chain dehy 100.0 3.1E-27 6.7E-32 222.1 31.6 278 14-345 1-307 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 1E-27 2.2E-32 223.7 26.1 264 26-344 15-290 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.5E-27 3.2E-32 218.6 26.4 253 38-344 1-264 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 3.7E-27 8E-32 215.9 26.3 250 42-345 2-260 (288)
124 KOG1196 Predicted NAD-dependen 99.9 2.6E-24 5.6E-29 190.3 25.8 278 12-346 3-311 (343)
125 cd08255 2-desacetyl-2-hydroxye 99.9 1.7E-24 3.7E-29 198.6 24.2 219 62-345 19-248 (277)
126 KOG1202 Animal-type fatty acid 99.9 3.6E-23 7.8E-28 207.6 15.2 253 25-340 1429-1702(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 5.4E-23 1.2E-27 162.4 8.8 105 37-162 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 3.4E-17 7.4E-22 133.1 13.3 128 204-339 1-130 (130)
129 PRK09424 pntA NAD(P) transhydr 99.4 1.5E-11 3.2E-16 120.6 15.2 153 191-349 162-339 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.3 1.4E-10 3E-15 111.1 15.8 149 183-351 190-343 (413)
131 PRK05476 S-adenosyl-L-homocyst 98.4 4E-06 8.7E-11 80.9 14.0 104 181-299 198-303 (425)
132 TIGR00561 pntA NAD(P) transhyd 98.4 2.3E-06 5E-11 84.1 11.8 106 192-299 162-288 (511)
133 PRK08306 dipicolinate synthase 98.3 1.7E-05 3.6E-10 73.6 13.9 98 193-302 151-248 (296)
134 TIGR01035 hemA glutamyl-tRNA r 98.3 8.1E-08 1.8E-12 93.3 -2.4 160 66-276 89-253 (417)
135 TIGR00936 ahcY adenosylhomocys 98.2 1.9E-05 4.1E-10 75.8 13.0 100 184-298 184-285 (406)
136 cd05213 NAD_bind_Glutamyl_tRNA 98.2 6.5E-06 1.4E-10 77.0 8.5 109 157-276 139-251 (311)
137 PLN02494 adenosylhomocysteinas 98.2 2.5E-05 5.4E-10 75.8 12.2 102 182-298 241-344 (477)
138 PRK00517 prmA ribosomal protei 98.1 6.5E-05 1.4E-09 68.0 13.3 132 147-299 78-217 (250)
139 TIGR02853 spore_dpaA dipicolin 98.0 3.1E-05 6.8E-10 71.4 10.2 98 193-302 150-247 (287)
140 PRK11873 arsM arsenite S-adeno 98.0 1.4E-05 3.1E-10 73.2 7.1 104 188-298 72-186 (272)
141 PTZ00075 Adenosylhomocysteinas 98.0 0.00013 2.8E-09 71.1 13.1 126 158-298 217-344 (476)
142 TIGR00518 alaDH alanine dehydr 97.9 0.0001 2.2E-09 70.6 10.6 99 193-299 166-271 (370)
143 PRK08324 short chain dehydroge 97.8 0.00011 2.4E-09 76.1 11.1 138 147-298 386-560 (681)
144 PF13602 ADH_zinc_N_2: Zinc-bi 97.8 2.6E-06 5.7E-11 68.5 -1.2 93 237-345 1-99 (127)
145 COG2518 Pcm Protein-L-isoaspar 97.8 6.3E-05 1.4E-09 65.2 7.2 118 166-296 47-170 (209)
146 PRK12771 putative glutamate sy 97.8 2.1E-05 4.6E-10 79.6 4.6 79 190-274 133-233 (564)
147 COG0300 DltE Short-chain dehyd 97.6 0.0013 2.8E-08 59.5 12.8 81 192-273 4-94 (265)
148 PRK00045 hemA glutamyl-tRNA re 97.6 0.00013 2.9E-09 71.1 6.5 161 66-276 91-255 (423)
149 COG2242 CobL Precorrin-6B meth 97.6 0.00088 1.9E-08 56.9 10.3 103 187-296 28-136 (187)
150 COG4221 Short-chain alcohol de 97.5 0.0005 1.1E-08 60.8 8.9 79 193-273 5-91 (246)
151 PF01488 Shikimate_DH: Shikima 97.5 0.0003 6.6E-09 57.3 7.2 97 192-297 10-111 (135)
152 TIGR00406 prmA ribosomal prote 97.5 0.00055 1.2E-08 63.3 9.2 98 191-298 157-262 (288)
153 PRK05993 short chain dehydroge 97.4 0.0021 4.5E-08 58.9 12.2 79 193-273 3-86 (277)
154 PRK05693 short chain dehydroge 97.4 0.0024 5.2E-08 58.3 12.1 77 195-273 2-82 (274)
155 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0033 7.2E-08 55.8 12.5 103 193-298 4-138 (238)
156 PRK06182 short chain dehydroge 97.4 0.0025 5.4E-08 58.1 11.7 79 193-273 2-84 (273)
157 PF00670 AdoHcyase_NAD: S-aden 97.4 0.0021 4.6E-08 53.6 10.0 94 191-299 20-114 (162)
158 KOG1209 1-Acyl dihydroxyaceton 97.2 0.0023 5.1E-08 55.3 9.2 110 192-304 5-147 (289)
159 COG1748 LYS9 Saccharopine dehy 97.2 0.004 8.7E-08 59.4 11.8 98 195-299 2-103 (389)
160 PRK11705 cyclopropane fatty ac 97.2 0.0027 5.9E-08 61.0 10.7 109 177-295 151-267 (383)
161 KOG1205 Predicted dehydrogenas 97.2 0.0046 9.9E-08 56.5 11.3 112 192-305 10-159 (282)
162 PRK00377 cbiT cobalt-precorrin 97.2 0.005 1.1E-07 53.6 11.2 102 187-294 34-144 (198)
163 COG3967 DltE Short-chain dehyd 97.2 0.0025 5.3E-08 54.9 8.6 79 193-273 4-88 (245)
164 PRK13943 protein-L-isoaspartat 97.2 0.0036 7.8E-08 58.6 10.6 101 187-294 74-179 (322)
165 PF02826 2-Hacid_dh_C: D-isome 97.2 0.0027 5.7E-08 54.4 8.9 115 192-323 34-153 (178)
166 PRK12742 oxidoreductase; Provi 97.2 0.0098 2.1E-07 52.7 13.0 102 193-299 5-135 (237)
167 PF11017 DUF2855: Protein of u 97.1 0.049 1.1E-06 50.5 16.7 140 147-299 90-235 (314)
168 PRK07326 short chain dehydroge 97.0 0.013 2.8E-07 52.0 12.0 79 193-273 5-92 (237)
169 PRK07109 short chain dehydroge 97.0 0.0099 2.1E-07 56.2 11.7 79 193-273 7-95 (334)
170 PRK08265 short chain dehydroge 97.0 0.011 2.4E-07 53.5 11.6 79 193-273 5-90 (261)
171 PRK05872 short chain dehydroge 97.0 0.011 2.3E-07 54.8 11.7 79 193-273 8-95 (296)
172 PRK07806 short chain dehydroge 96.9 0.016 3.4E-07 51.8 11.7 101 193-296 5-135 (248)
173 TIGR02469 CbiT precorrin-6Y C5 96.9 0.015 3.1E-07 45.9 10.3 103 187-295 13-122 (124)
174 PRK12828 short chain dehydroge 96.8 0.019 4.2E-07 50.7 12.0 79 193-273 6-92 (239)
175 PF13460 NAD_binding_10: NADH( 96.8 0.01 2.2E-07 50.5 9.8 94 197-298 1-100 (183)
176 PRK08177 short chain dehydroge 96.8 0.0082 1.8E-07 53.0 9.4 77 195-273 2-81 (225)
177 TIGR00438 rrmJ cell division p 96.8 0.025 5.5E-07 48.6 12.2 102 189-297 28-148 (188)
178 PF01135 PCMT: Protein-L-isoas 96.8 0.0019 4.2E-08 56.7 5.1 103 186-296 65-174 (209)
179 PRK08017 oxidoreductase; Provi 96.8 0.0079 1.7E-07 54.0 9.4 77 195-273 3-84 (256)
180 PLN03209 translocon at the inn 96.8 0.012 2.5E-07 59.1 11.2 47 187-234 73-120 (576)
181 PRK08261 fabG 3-ketoacyl-(acyl 96.8 0.017 3.6E-07 56.9 12.3 79 193-273 209-294 (450)
182 PF12847 Methyltransf_18: Meth 96.8 0.0047 1E-07 48.0 6.7 94 193-294 1-110 (112)
183 PRK13944 protein-L-isoaspartat 96.8 0.01 2.2E-07 52.0 9.3 100 186-294 65-172 (205)
184 PRK07231 fabG 3-ketoacyl-(acyl 96.7 0.017 3.7E-07 51.6 10.8 79 193-273 4-91 (251)
185 PF06325 PrmA: Ribosomal prote 96.7 0.01 2.2E-07 54.9 9.3 137 147-300 119-264 (295)
186 PRK06139 short chain dehydroge 96.7 0.0081 1.7E-07 56.7 8.9 79 193-273 6-94 (330)
187 PRK07060 short chain dehydroge 96.7 0.013 2.8E-07 52.2 9.8 77 193-273 8-87 (245)
188 PRK13942 protein-L-isoaspartat 96.7 0.022 4.8E-07 50.2 10.9 100 186-294 69-175 (212)
189 PRK08267 short chain dehydroge 96.7 0.031 6.6E-07 50.4 12.2 77 195-273 2-87 (260)
190 PRK12939 short chain dehydroge 96.7 0.031 6.7E-07 49.9 12.1 79 193-273 6-94 (250)
191 PRK06500 short chain dehydroge 96.6 0.03 6.6E-07 49.9 11.9 79 193-273 5-90 (249)
192 PRK06057 short chain dehydroge 96.6 0.013 2.9E-07 52.7 9.5 79 193-273 6-89 (255)
193 PRK13940 glutamyl-tRNA reducta 96.6 0.012 2.7E-07 57.0 9.6 97 191-297 178-275 (414)
194 cd01080 NAD_bind_m-THF_DH_Cycl 96.6 0.027 5.8E-07 47.7 10.2 97 172-298 22-119 (168)
195 PRK06953 short chain dehydroge 96.6 0.016 3.6E-07 50.9 9.5 77 195-273 2-80 (222)
196 PRK08628 short chain dehydroge 96.6 0.032 7E-07 50.2 11.6 79 193-273 6-93 (258)
197 PF01262 AlaDh_PNT_C: Alanine 96.6 0.0064 1.4E-07 51.5 6.4 103 194-299 20-143 (168)
198 PRK07831 short chain dehydroge 96.6 0.017 3.6E-07 52.3 9.6 81 191-273 14-107 (262)
199 PRK06128 oxidoreductase; Provi 96.5 0.029 6.3E-07 52.0 11.3 79 193-273 54-144 (300)
200 PRK06484 short chain dehydroge 96.5 0.03 6.6E-07 56.0 12.1 105 192-299 267-404 (520)
201 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.015 3.2E-07 52.7 8.9 78 193-272 4-88 (262)
202 cd05311 NAD_bind_2_malic_enz N 96.5 0.053 1.1E-06 48.3 12.2 93 192-296 23-129 (226)
203 PRK07832 short chain dehydroge 96.5 0.046 9.9E-07 49.7 12.1 77 195-273 1-88 (272)
204 PRK04148 hypothetical protein; 96.5 0.089 1.9E-06 42.6 12.2 98 189-295 12-109 (134)
205 PRK12829 short chain dehydroge 96.5 0.014 3E-07 52.7 8.5 83 189-273 6-96 (264)
206 PRK06200 2,3-dihydroxy-2,3-dih 96.5 0.017 3.6E-07 52.3 9.1 79 193-273 5-90 (263)
207 PRK12823 benD 1,6-dihydroxycyc 96.5 0.031 6.7E-07 50.3 10.8 79 193-273 7-94 (260)
208 PRK06949 short chain dehydroge 96.5 0.016 3.5E-07 52.0 8.9 80 192-273 7-96 (258)
209 PRK07814 short chain dehydroge 96.4 0.016 3.5E-07 52.5 8.7 79 193-273 9-97 (263)
210 PRK06841 short chain dehydroge 96.4 0.018 3.9E-07 51.7 9.0 79 193-273 14-99 (255)
211 PLN02780 ketoreductase/ oxidor 96.4 0.02 4.4E-07 53.7 9.5 80 193-273 52-142 (320)
212 PRK08415 enoyl-(acyl carrier p 96.4 0.061 1.3E-06 49.2 12.4 104 193-299 4-147 (274)
213 PRK03369 murD UDP-N-acetylmura 96.4 0.023 5.1E-07 56.5 10.3 73 191-274 9-81 (488)
214 PRK09186 flagellin modificatio 96.4 0.044 9.6E-07 49.1 11.3 78 193-272 3-92 (256)
215 PF02353 CMAS: Mycolic acid cy 96.4 0.011 2.4E-07 54.1 7.3 99 185-295 54-166 (273)
216 PRK07825 short chain dehydroge 96.4 0.023 5.1E-07 51.6 9.4 78 194-273 5-88 (273)
217 TIGR00080 pimt protein-L-isoas 96.4 0.025 5.4E-07 49.9 9.2 102 186-294 70-176 (215)
218 COG4122 Predicted O-methyltran 96.3 0.054 1.2E-06 47.7 11.0 104 188-294 54-165 (219)
219 PRK00107 gidB 16S rRNA methylt 96.3 0.036 7.8E-07 47.8 9.7 97 191-295 43-145 (187)
220 TIGR01832 kduD 2-deoxy-D-gluco 96.3 0.026 5.6E-07 50.4 9.3 79 193-273 4-90 (248)
221 PRK05867 short chain dehydroge 96.3 0.02 4.4E-07 51.4 8.6 79 193-273 8-96 (253)
222 PRK12549 shikimate 5-dehydroge 96.3 0.043 9.4E-07 50.6 10.8 44 192-235 125-168 (284)
223 PRK08263 short chain dehydroge 96.3 0.053 1.1E-06 49.4 11.3 78 194-273 3-87 (275)
224 PRK14175 bifunctional 5,10-met 96.3 0.043 9.3E-07 50.4 10.5 95 173-298 137-233 (286)
225 cd01065 NAD_bind_Shikimate_DH 96.3 0.029 6.2E-07 46.4 8.8 98 192-298 17-119 (155)
226 TIGR01809 Shik-DH-AROM shikima 96.3 0.013 2.8E-07 54.1 7.1 75 193-273 124-200 (282)
227 PRK07502 cyclohexadienyl dehyd 96.3 0.042 9.1E-07 51.2 10.7 92 195-297 7-102 (307)
228 PRK06180 short chain dehydroge 96.3 0.025 5.4E-07 51.7 9.1 79 193-273 3-88 (277)
229 PRK10538 malonic semialdehyde 96.3 0.07 1.5E-06 47.8 11.9 76 196-273 2-84 (248)
230 COG2226 UbiE Methylase involve 96.3 0.048 1E-06 48.7 10.5 108 185-299 43-160 (238)
231 COG2264 PrmA Ribosomal protein 96.3 0.026 5.6E-07 51.9 9.0 140 147-299 120-267 (300)
232 cd01078 NAD_bind_H4MPT_DH NADP 96.3 0.063 1.4E-06 46.4 11.1 76 193-275 27-109 (194)
233 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.027 5.9E-07 50.3 9.1 78 193-272 4-91 (253)
234 PRK05866 short chain dehydroge 96.2 0.031 6.8E-07 51.7 9.7 79 193-273 39-127 (293)
235 PRK08339 short chain dehydroge 96.2 0.029 6.3E-07 50.9 9.3 79 193-273 7-95 (263)
236 PRK06718 precorrin-2 dehydroge 96.2 0.16 3.4E-06 44.4 13.4 100 193-304 9-109 (202)
237 PRK06484 short chain dehydroge 96.2 0.054 1.2E-06 54.3 11.8 79 193-273 4-89 (520)
238 PRK06398 aldose dehydrogenase; 96.2 0.047 1E-06 49.3 10.4 74 193-273 5-82 (258)
239 PRK08618 ornithine cyclodeamin 96.2 0.085 1.8E-06 49.6 12.4 96 191-299 124-225 (325)
240 PRK12429 3-hydroxybutyrate deh 96.2 0.052 1.1E-06 48.6 10.6 79 193-273 3-91 (258)
241 COG2227 UbiG 2-polyprenyl-3-me 96.2 0.048 1E-06 48.3 9.7 96 192-295 58-161 (243)
242 PRK09291 short chain dehydroge 96.2 0.031 6.8E-07 50.1 9.0 74 194-273 2-83 (257)
243 PRK06483 dihydromonapterin red 96.1 0.042 9.2E-07 48.7 9.7 78 194-273 2-84 (236)
244 COG2230 Cfa Cyclopropane fatty 96.1 0.11 2.5E-06 47.4 12.3 107 182-300 61-181 (283)
245 PRK06701 short chain dehydroge 96.1 0.077 1.7E-06 48.9 11.7 80 192-273 44-134 (290)
246 PRK07478 short chain dehydroge 96.1 0.034 7.3E-07 50.0 9.0 79 193-273 5-93 (254)
247 PRK07774 short chain dehydroge 96.1 0.033 7.2E-07 49.8 8.9 79 193-273 5-93 (250)
248 COG0686 Ald Alanine dehydrogen 96.1 0.02 4.3E-07 52.5 7.2 98 195-299 169-272 (371)
249 PRK14027 quinate/shikimate deh 96.1 0.057 1.2E-06 49.8 10.5 44 192-235 125-168 (283)
250 PRK06463 fabG 3-ketoacyl-(acyl 96.1 0.037 7.9E-07 49.8 9.2 79 193-273 6-89 (255)
251 PRK12481 2-deoxy-D-gluconate 3 96.1 0.031 6.8E-07 50.2 8.6 79 193-273 7-93 (251)
252 PRK05876 short chain dehydroge 96.1 0.035 7.5E-07 50.8 9.0 79 193-273 5-93 (275)
253 PRK07523 gluconate 5-dehydroge 96.1 0.037 8.1E-07 49.7 9.1 79 193-273 9-97 (255)
254 PRK08594 enoyl-(acyl carrier p 96.1 0.078 1.7E-06 47.9 11.2 78 193-272 6-96 (257)
255 PRK06179 short chain dehydroge 96.1 0.02 4.4E-07 51.9 7.4 77 193-273 3-83 (270)
256 COG0373 HemA Glutamyl-tRNA red 96.1 0.044 9.5E-07 52.8 9.8 97 192-298 176-277 (414)
257 PRK07904 short chain dehydroge 96.0 0.052 1.1E-06 49.0 9.9 81 191-273 5-97 (253)
258 PRK07024 short chain dehydroge 96.0 0.041 8.9E-07 49.6 9.2 78 194-273 2-88 (257)
259 TIGR01470 cysG_Nterm siroheme 96.0 0.17 3.7E-06 44.3 12.7 101 193-304 8-109 (205)
260 PRK06196 oxidoreductase; Provi 96.0 0.043 9.4E-07 51.2 9.6 79 193-273 25-109 (315)
261 PRK09072 short chain dehydroge 96.0 0.045 9.7E-07 49.5 9.3 79 193-273 4-90 (263)
262 PRK07890 short chain dehydroge 96.0 0.039 8.5E-07 49.5 8.9 79 193-273 4-92 (258)
263 PRK08703 short chain dehydroge 96.0 0.054 1.2E-06 48.1 9.7 80 193-273 5-97 (239)
264 PRK07985 oxidoreductase; Provi 96.0 0.1 2.2E-06 48.3 11.8 103 193-298 48-188 (294)
265 PRK13394 3-hydroxybutyrate deh 96.0 0.039 8.5E-07 49.6 8.9 79 193-273 6-94 (262)
266 PRK08261 fabG 3-ketoacyl-(acyl 96.0 0.016 3.6E-07 56.9 6.8 95 187-299 27-127 (450)
267 PRK05884 short chain dehydroge 96.0 0.052 1.1E-06 48.0 9.4 74 196-272 2-78 (223)
268 CHL00194 ycf39 Ycf39; Provisio 96.0 0.085 1.8E-06 49.3 11.3 95 196-297 2-111 (317)
269 PRK07454 short chain dehydroge 96.0 0.057 1.2E-06 48.0 9.8 80 192-273 4-93 (241)
270 PRK05653 fabG 3-ketoacyl-(acyl 96.0 0.045 9.6E-07 48.5 9.0 79 193-273 4-92 (246)
271 PRK07576 short chain dehydroge 96.0 0.045 9.7E-07 49.7 9.1 78 193-272 8-95 (264)
272 PF00106 adh_short: short chai 96.0 0.022 4.8E-07 47.5 6.6 79 195-273 1-90 (167)
273 PRK07063 short chain dehydroge 96.0 0.044 9.6E-07 49.4 9.1 79 193-273 6-96 (260)
274 PRK07062 short chain dehydroge 96.0 0.041 8.8E-07 49.8 8.8 79 193-273 7-97 (265)
275 PRK07402 precorrin-6B methylas 96.0 0.15 3.2E-06 44.1 12.0 105 186-296 33-143 (196)
276 cd01075 NAD_bind_Leu_Phe_Val_D 96.0 0.11 2.3E-06 45.4 11.0 90 192-296 26-116 (200)
277 PRK06172 short chain dehydroge 96.0 0.043 9.4E-07 49.2 8.9 79 193-273 6-94 (253)
278 PRK06194 hypothetical protein; 96.0 0.038 8.2E-07 50.6 8.7 79 193-273 5-93 (287)
279 PRK07677 short chain dehydroge 95.9 0.041 9E-07 49.3 8.7 78 194-273 1-88 (252)
280 PRK06505 enoyl-(acyl carrier p 95.9 0.046 1E-06 49.9 9.1 79 193-273 6-95 (271)
281 PRK15116 sulfur acceptor prote 95.9 0.16 3.5E-06 46.3 12.4 105 193-299 29-157 (268)
282 PLN00203 glutamyl-tRNA reducta 95.9 0.071 1.5E-06 53.3 10.9 99 193-298 265-372 (519)
283 PF03435 Saccharop_dh: Sacchar 95.9 0.048 1E-06 52.5 9.5 93 197-294 1-97 (386)
284 PF03446 NAD_binding_2: NAD bi 95.9 0.15 3.2E-06 42.8 11.4 88 195-296 2-95 (163)
285 PRK12937 short chain dehydroge 95.9 0.14 3E-06 45.5 11.9 103 193-298 4-142 (245)
286 PRK14967 putative methyltransf 95.9 0.13 2.8E-06 45.6 11.5 99 188-296 31-160 (223)
287 cd00755 YgdL_like Family of ac 95.9 0.072 1.6E-06 47.5 9.8 36 193-228 10-45 (231)
288 PRK06181 short chain dehydroge 95.9 0.05 1.1E-06 49.1 9.0 78 194-273 1-88 (263)
289 KOG1201 Hydroxysteroid 17-beta 95.9 0.052 1.1E-06 49.6 8.9 80 192-273 36-124 (300)
290 PF13241 NAD_binding_7: Putati 95.9 0.067 1.4E-06 41.3 8.5 94 193-303 6-99 (103)
291 PRK06482 short chain dehydroge 95.9 0.052 1.1E-06 49.4 9.1 77 195-273 3-86 (276)
292 PRK05717 oxidoreductase; Valid 95.9 0.051 1.1E-06 48.9 8.9 79 193-273 9-94 (255)
293 PRK05854 short chain dehydroge 95.8 0.058 1.3E-06 50.4 9.5 79 193-273 13-103 (313)
294 PRK09242 tropinone reductase; 95.8 0.051 1.1E-06 48.9 8.8 79 193-273 8-98 (257)
295 PRK07533 enoyl-(acyl carrier p 95.8 0.071 1.5E-06 48.2 9.8 79 193-273 9-98 (258)
296 PLN02366 spermidine synthase 95.8 0.075 1.6E-06 49.5 10.0 101 191-295 89-206 (308)
297 PRK08213 gluconate 5-dehydroge 95.8 0.056 1.2E-06 48.7 9.0 79 193-273 11-99 (259)
298 PRK06114 short chain dehydroge 95.8 0.057 1.2E-06 48.5 8.9 79 193-273 7-96 (254)
299 PRK08085 gluconate 5-dehydroge 95.8 0.068 1.5E-06 47.9 9.4 79 193-273 8-96 (254)
300 TIGR02356 adenyl_thiF thiazole 95.8 0.09 1.9E-06 45.9 9.8 35 193-227 20-54 (202)
301 PRK08589 short chain dehydroge 95.8 0.051 1.1E-06 49.5 8.6 79 193-273 5-92 (272)
302 PRK06138 short chain dehydroge 95.8 0.051 1.1E-06 48.5 8.5 79 193-273 4-91 (252)
303 PRK06079 enoyl-(acyl carrier p 95.8 0.064 1.4E-06 48.3 9.1 79 193-273 6-93 (252)
304 PLN02253 xanthoxin dehydrogena 95.8 0.051 1.1E-06 49.6 8.6 79 193-273 17-104 (280)
305 PRK06125 short chain dehydroge 95.7 0.1 2.2E-06 47.1 10.4 77 193-273 6-91 (259)
306 PRK08643 acetoin reductase; Va 95.7 0.056 1.2E-06 48.5 8.7 78 194-273 2-89 (256)
307 COG0169 AroE Shikimate 5-dehyd 95.7 0.042 9.2E-07 50.4 7.9 45 192-236 124-168 (283)
308 KOG1014 17 beta-hydroxysteroid 95.7 0.076 1.6E-06 48.8 9.3 79 193-273 48-136 (312)
309 PLN02781 Probable caffeoyl-CoA 95.7 0.11 2.3E-06 46.6 10.3 103 188-294 63-177 (234)
310 PRK06198 short chain dehydroge 95.7 0.053 1.1E-06 48.8 8.4 80 193-273 5-94 (260)
311 PRK07035 short chain dehydroge 95.7 0.061 1.3E-06 48.2 8.7 79 193-273 7-95 (252)
312 PRK07856 short chain dehydroge 95.7 0.05 1.1E-06 48.8 8.2 77 193-273 5-85 (252)
313 PRK08993 2-deoxy-D-gluconate 3 95.7 0.067 1.5E-06 48.1 9.0 79 193-273 9-95 (253)
314 PRK08220 2,3-dihydroxybenzoate 95.7 0.13 2.8E-06 45.9 10.9 74 193-273 7-86 (252)
315 PRK06720 hypothetical protein; 95.7 0.083 1.8E-06 44.7 8.9 80 193-273 15-103 (169)
316 PRK06940 short chain dehydroge 95.7 0.15 3.3E-06 46.5 11.4 77 194-273 2-86 (275)
317 PRK05875 short chain dehydroge 95.7 0.071 1.5E-06 48.5 9.2 78 193-272 6-95 (276)
318 PRK11207 tellurite resistance 95.7 0.046 1E-06 47.5 7.5 98 187-294 24-133 (197)
319 TIGR01318 gltD_gamma_fam gluta 95.7 0.06 1.3E-06 53.3 9.2 77 193-274 140-237 (467)
320 PRK07067 sorbitol dehydrogenas 95.6 0.072 1.6E-06 47.9 9.1 79 193-273 5-90 (257)
321 PRK07453 protochlorophyllide o 95.6 0.066 1.4E-06 50.1 9.1 78 193-272 5-92 (322)
322 PRK08251 short chain dehydroge 95.6 0.076 1.6E-06 47.4 9.1 77 194-272 2-90 (248)
323 PRK08226 short chain dehydroge 95.6 0.068 1.5E-06 48.2 8.9 79 193-273 5-92 (263)
324 PRK08340 glucose-1-dehydrogena 95.6 0.077 1.7E-06 47.8 9.1 76 196-273 2-86 (259)
325 PRK06124 gluconate 5-dehydroge 95.6 0.076 1.7E-06 47.7 9.1 79 193-273 10-98 (256)
326 PRK00811 spermidine synthase; 95.6 0.08 1.7E-06 48.8 9.2 99 192-295 75-191 (283)
327 PRK12548 shikimate 5-dehydroge 95.6 0.086 1.9E-06 48.8 9.5 37 192-228 124-160 (289)
328 PRK07074 short chain dehydroge 95.6 0.084 1.8E-06 47.4 9.3 78 194-273 2-87 (257)
329 PRK12747 short chain dehydroge 95.6 0.28 6E-06 43.9 12.6 104 193-299 3-148 (252)
330 PRK07340 ornithine cyclodeamin 95.6 0.085 1.8E-06 49.2 9.4 96 191-299 122-221 (304)
331 PRK06719 precorrin-2 dehydroge 95.6 0.22 4.9E-06 41.6 11.1 90 193-296 12-101 (157)
332 PRK06197 short chain dehydroge 95.6 0.079 1.7E-06 49.2 9.3 79 193-273 15-105 (306)
333 PRK07574 formate dehydrogenase 95.6 0.13 2.8E-06 49.5 10.8 45 193-238 191-235 (385)
334 PRK07791 short chain dehydroge 95.6 0.096 2.1E-06 48.2 9.7 80 192-273 4-102 (286)
335 PRK06077 fabG 3-ketoacyl-(acyl 95.6 0.23 5E-06 44.3 12.0 104 193-299 5-144 (252)
336 PRK12809 putative oxidoreducta 95.6 0.068 1.5E-06 55.1 9.5 75 193-273 309-405 (639)
337 PRK12367 short chain dehydroge 95.6 0.089 1.9E-06 47.3 9.2 75 193-273 13-89 (245)
338 PLN00141 Tic62-NAD(P)-related 95.5 0.15 3.1E-06 45.9 10.7 100 193-297 16-133 (251)
339 PRK07102 short chain dehydroge 95.5 0.11 2.4E-06 46.2 9.8 76 195-273 2-86 (243)
340 PRK12826 3-ketoacyl-(acyl-carr 95.5 0.074 1.6E-06 47.3 8.7 79 193-273 5-93 (251)
341 PRK08277 D-mannonate oxidoredu 95.5 0.076 1.6E-06 48.4 8.8 78 193-272 9-96 (278)
342 PRK06141 ornithine cyclodeamin 95.5 0.18 3.9E-06 47.2 11.4 95 191-298 122-222 (314)
343 PRK08219 short chain dehydroge 95.5 0.13 2.8E-06 45.0 10.0 75 194-273 3-81 (227)
344 PRK12384 sorbitol-6-phosphate 95.5 0.1 2.2E-06 46.9 9.4 78 194-273 2-91 (259)
345 KOG0725 Reductases with broad 95.5 0.066 1.4E-06 49.0 8.1 80 192-273 6-99 (270)
346 PRK08303 short chain dehydroge 95.5 0.087 1.9E-06 49.1 9.1 34 193-227 7-41 (305)
347 PRK06603 enoyl-(acyl carrier p 95.4 0.093 2E-06 47.5 9.0 78 193-272 7-95 (260)
348 PRK08862 short chain dehydroge 95.4 0.15 3.2E-06 45.3 10.1 78 193-272 4-92 (227)
349 PRK13243 glyoxylate reductase; 95.4 0.12 2.6E-06 48.8 9.9 37 193-230 149-185 (333)
350 PRK12936 3-ketoacyl-(acyl-carr 95.4 0.099 2.1E-06 46.4 9.0 79 193-273 5-90 (245)
351 PRK06935 2-deoxy-D-gluconate 3 95.4 0.093 2E-06 47.2 8.9 78 193-273 14-101 (258)
352 PRK08264 short chain dehydroge 95.4 0.073 1.6E-06 47.2 8.2 75 193-273 5-83 (238)
353 COG1179 Dinucleotide-utilizing 95.4 0.22 4.7E-06 44.2 10.5 106 193-299 29-157 (263)
354 PRK07577 short chain dehydroge 95.4 0.076 1.7E-06 46.9 8.1 74 193-273 2-78 (234)
355 PRK06914 short chain dehydroge 95.4 0.11 2.4E-06 47.3 9.5 77 194-273 3-91 (280)
356 PLN03139 formate dehydrogenase 95.4 0.17 3.7E-06 48.6 10.9 46 193-239 198-243 (386)
357 PRK06101 short chain dehydroge 95.4 0.14 3E-06 45.6 9.8 75 195-272 2-80 (240)
358 PLN02476 O-methyltransferase 95.3 0.19 4E-06 46.1 10.5 103 187-293 112-226 (278)
359 TIGR00507 aroE shikimate 5-deh 95.3 0.16 3.5E-06 46.4 10.2 95 191-298 114-217 (270)
360 PRK08690 enoyl-(acyl carrier p 95.3 0.1 2.2E-06 47.2 8.9 79 193-273 5-94 (261)
361 TIGR01963 PHB_DH 3-hydroxybuty 95.3 0.098 2.1E-06 46.7 8.6 78 194-273 1-88 (255)
362 PF03807 F420_oxidored: NADP o 95.3 0.58 1.2E-05 35.1 11.6 85 196-294 1-93 (96)
363 PRK14192 bifunctional 5,10-met 95.3 0.18 3.8E-06 46.5 10.2 77 192-298 157-234 (283)
364 PRK01581 speE spermidine synth 95.3 0.32 6.9E-06 46.2 12.0 100 191-296 148-269 (374)
365 PRK07666 fabG 3-ketoacyl-(acyl 95.2 0.11 2.3E-06 46.2 8.7 80 193-273 6-94 (239)
366 TIGR03206 benzo_BadH 2-hydroxy 95.2 0.13 2.8E-06 45.8 9.2 78 193-272 2-89 (250)
367 TIGR00477 tehB tellurite resis 95.2 0.091 2E-06 45.5 7.8 98 186-294 23-132 (195)
368 PRK12743 oxidoreductase; Provi 95.2 0.12 2.5E-06 46.5 8.8 78 194-273 2-90 (256)
369 PRK06113 7-alpha-hydroxysteroi 95.2 0.12 2.6E-06 46.4 8.9 79 193-273 10-98 (255)
370 PRK07097 gluconate 5-dehydroge 95.2 0.13 2.8E-06 46.5 9.1 79 193-273 9-97 (265)
371 PRK08945 putative oxoacyl-(acy 95.2 0.1 2.2E-06 46.6 8.3 83 190-273 8-102 (247)
372 PRK08317 hypothetical protein; 95.1 0.11 2.5E-06 45.8 8.5 102 186-296 12-125 (241)
373 PRK08278 short chain dehydroge 95.1 0.11 2.4E-06 47.4 8.5 79 193-273 5-100 (273)
374 PRK12769 putative oxidoreducta 95.1 0.098 2.1E-06 54.1 9.0 76 192-273 325-422 (654)
375 PRK05650 short chain dehydroge 95.1 0.12 2.5E-06 47.0 8.7 77 195-273 1-87 (270)
376 PRK08159 enoyl-(acyl carrier p 95.1 0.16 3.6E-06 46.3 9.6 82 190-273 6-98 (272)
377 PLN02928 oxidoreductase family 95.0 0.26 5.7E-06 46.8 11.0 35 193-228 158-192 (347)
378 PLN03075 nicotianamine synthas 95.0 0.17 3.7E-06 46.7 9.3 98 193-295 123-233 (296)
379 PLN02657 3,8-divinyl protochlo 95.0 0.15 3.3E-06 49.2 9.5 81 190-273 56-146 (390)
380 PRK07370 enoyl-(acyl carrier p 95.0 0.12 2.6E-06 46.7 8.3 104 193-299 5-151 (258)
381 PRK12475 thiamine/molybdopteri 95.0 0.19 4E-06 47.6 9.8 36 193-228 23-58 (338)
382 TIGR02355 moeB molybdopterin s 95.0 0.088 1.9E-06 47.3 7.2 36 193-228 23-58 (240)
383 PRK05690 molybdopterin biosynt 94.9 0.16 3.6E-06 45.7 9.0 36 193-228 31-66 (245)
384 TIGR03840 TMPT_Se_Te thiopurin 94.9 0.49 1.1E-05 41.7 11.8 101 192-296 33-153 (213)
385 PRK06523 short chain dehydroge 94.9 0.11 2.5E-06 46.6 7.9 75 193-272 8-86 (260)
386 PRK12938 acetyacetyl-CoA reduc 94.9 0.1 2.2E-06 46.4 7.6 79 193-273 2-91 (246)
387 PRK14191 bifunctional 5,10-met 94.9 0.26 5.6E-06 45.2 10.0 95 173-298 136-232 (285)
388 PRK08063 enoyl-(acyl carrier p 94.9 0.16 3.5E-06 45.2 8.8 79 193-273 3-92 (250)
389 PRK00312 pcm protein-L-isoaspa 94.9 0.23 5.1E-06 43.5 9.6 100 187-295 72-175 (212)
390 TIGR02622 CDP_4_6_dhtase CDP-g 94.9 0.075 1.6E-06 50.3 6.9 77 193-273 3-85 (349)
391 TIGR02632 RhaD_aldol-ADH rhamn 94.8 0.13 2.9E-06 53.3 9.2 113 148-273 379-503 (676)
392 KOG4169 15-hydroxyprostaglandi 94.8 0.42 9.1E-06 42.1 10.6 79 194-273 5-93 (261)
393 TIGR02415 23BDH acetoin reduct 94.8 0.17 3.6E-06 45.3 8.8 77 195-273 1-87 (254)
394 PRK08644 thiamine biosynthesis 94.8 0.21 4.6E-06 43.9 9.1 35 193-227 27-61 (212)
395 PRK12749 quinate/shikimate deh 94.8 0.24 5.2E-06 45.8 9.8 36 193-228 123-158 (288)
396 PRK07984 enoyl-(acyl carrier p 94.8 0.22 4.8E-06 45.2 9.5 78 193-272 5-93 (262)
397 PF01596 Methyltransf_3: O-met 94.8 0.093 2E-06 45.9 6.7 101 189-294 41-154 (205)
398 PRK14188 bifunctional 5,10-met 94.8 0.27 5.8E-06 45.5 9.9 94 173-298 137-233 (296)
399 cd05212 NAD_bind_m-THF_DH_Cycl 94.7 0.42 9.2E-06 39.1 10.0 82 187-298 20-103 (140)
400 PRK04266 fibrillarin; Provisio 94.7 0.49 1.1E-05 42.1 11.3 102 187-294 66-175 (226)
401 PRK14103 trans-aconitate 2-met 94.7 0.41 8.9E-06 43.2 11.0 97 186-294 22-125 (255)
402 PRK07424 bifunctional sterol d 94.7 0.19 4.1E-06 48.7 9.2 74 193-273 177-255 (406)
403 PLN02244 tocopherol O-methyltr 94.7 0.16 3.5E-06 48.1 8.5 95 192-296 117-224 (340)
404 TIGR01505 tartro_sem_red 2-hyd 94.7 0.37 8E-06 44.5 10.8 69 196-277 1-69 (291)
405 PRK12746 short chain dehydroge 94.7 0.62 1.3E-05 41.6 12.1 79 193-273 5-100 (254)
406 PRK08416 7-alpha-hydroxysteroi 94.7 0.22 4.8E-06 44.9 9.2 78 193-272 7-96 (260)
407 PRK10792 bifunctional 5,10-met 94.6 0.34 7.4E-06 44.4 10.2 93 174-297 139-233 (285)
408 PRK12550 shikimate 5-dehydroge 94.6 0.18 3.9E-06 46.2 8.4 69 190-272 118-187 (272)
409 PRK05557 fabG 3-ketoacyl-(acyl 94.6 0.22 4.9E-06 44.0 9.0 79 193-273 4-93 (248)
410 PRK11036 putative S-adenosyl-L 94.6 0.47 1E-05 42.9 11.1 96 192-294 43-148 (255)
411 PRK15469 ghrA bifunctional gly 94.6 0.26 5.6E-06 46.1 9.5 36 193-229 135-170 (312)
412 KOG1610 Corticosteroid 11-beta 94.6 0.6 1.3E-05 43.1 11.5 111 191-303 26-172 (322)
413 KOG1207 Diacetyl reductase/L-x 94.6 0.13 2.8E-06 43.3 6.6 44 193-237 6-50 (245)
414 PRK14189 bifunctional 5,10-met 94.6 0.31 6.8E-06 44.7 9.7 82 187-298 150-233 (285)
415 PF02558 ApbA: Ketopantoate re 94.5 0.022 4.7E-07 47.0 2.1 95 197-297 1-103 (151)
416 PRK14194 bifunctional 5,10-met 94.5 0.39 8.5E-06 44.4 10.4 94 173-297 138-233 (301)
417 PF02882 THF_DHG_CYH_C: Tetrah 94.5 0.26 5.7E-06 41.3 8.4 82 187-298 28-111 (160)
418 PRK06171 sorbitol-6-phosphate 94.5 0.11 2.4E-06 46.9 6.9 76 193-273 8-87 (266)
419 TIGR00417 speE spermidine synt 94.5 0.3 6.5E-06 44.6 9.6 99 192-295 71-186 (270)
420 PRK11559 garR tartronate semia 94.5 0.51 1.1E-05 43.6 11.3 71 195-278 3-73 (296)
421 PRK09135 pteridine reductase; 94.5 0.27 5.9E-06 43.6 9.2 78 193-272 5-94 (249)
422 PRK07688 thiamine/molybdopteri 94.5 0.25 5.4E-06 46.8 9.3 36 193-228 23-58 (339)
423 PF02670 DXP_reductoisom: 1-de 94.5 0.6 1.3E-05 37.6 10.0 87 197-287 1-114 (129)
424 TIGR02354 thiF_fam2 thiamine b 94.5 0.14 3E-06 44.7 7.0 35 193-227 20-54 (200)
425 TIGR00563 rsmB ribosomal RNA s 94.4 0.42 9E-06 46.8 11.1 106 187-297 232-370 (426)
426 cd05191 NAD_bind_amino_acid_DH 94.4 0.49 1.1E-05 35.0 9.1 35 192-226 21-55 (86)
427 PRK07417 arogenate dehydrogena 94.4 0.36 7.9E-06 44.3 10.1 88 196-296 2-92 (279)
428 PLN02730 enoyl-[acyl-carrier-p 94.4 0.65 1.4E-05 43.3 11.8 37 193-231 8-47 (303)
429 PRK12480 D-lactate dehydrogena 94.4 0.43 9.3E-06 45.0 10.7 37 193-230 145-181 (330)
430 PRK08223 hypothetical protein; 94.4 0.2 4.3E-06 46.1 8.1 36 193-228 26-61 (287)
431 PF02254 TrkA_N: TrkA-N domain 94.4 0.67 1.4E-05 36.1 10.3 92 197-294 1-95 (116)
432 PLN02589 caffeoyl-CoA O-methyl 94.4 0.52 1.1E-05 42.5 10.7 99 189-292 75-187 (247)
433 COG2910 Putative NADH-flavin r 94.4 0.22 4.7E-06 42.4 7.6 96 196-299 2-108 (211)
434 cd01483 E1_enzyme_family Super 94.4 0.44 9.6E-06 38.9 9.5 32 196-227 1-32 (143)
435 PRK07066 3-hydroxybutyryl-CoA 94.4 0.78 1.7E-05 43.1 12.2 39 195-234 8-46 (321)
436 PRK00258 aroE shikimate 5-dehy 94.4 0.2 4.4E-06 46.0 8.3 96 192-296 121-222 (278)
437 PRK08287 cobalt-precorrin-6Y C 94.4 0.72 1.6E-05 39.5 11.2 100 187-295 25-131 (187)
438 PRK05565 fabG 3-ketoacyl-(acyl 94.4 0.24 5.2E-06 43.9 8.6 78 194-273 5-93 (247)
439 PRK05855 short chain dehydroge 94.4 0.2 4.4E-06 50.5 9.1 79 193-273 314-402 (582)
440 PTZ00098 phosphoethanolamine N 94.3 0.19 4.2E-06 45.7 8.0 104 186-296 45-157 (263)
441 COG2519 GCD14 tRNA(1-methylade 94.3 0.45 9.7E-06 42.6 9.9 106 187-299 88-199 (256)
442 PF02719 Polysacc_synt_2: Poly 94.3 0.29 6.3E-06 45.1 9.0 76 197-273 1-87 (293)
443 PRK07775 short chain dehydroge 94.3 0.39 8.4E-06 43.7 10.0 79 193-273 9-97 (274)
444 PF08659 KR: KR domain; Inter 94.3 0.2 4.3E-06 42.8 7.5 77 196-273 2-91 (181)
445 PRK08762 molybdopterin biosynt 94.3 0.23 4.9E-06 47.8 8.7 35 193-227 134-168 (376)
446 PRK01683 trans-aconitate 2-met 94.3 0.48 1E-05 42.8 10.4 99 187-295 25-130 (258)
447 PRK08936 glucose-1-dehydrogena 94.3 0.29 6.3E-06 44.0 9.0 79 193-273 6-95 (261)
448 PF13659 Methyltransf_26: Meth 94.3 0.18 3.9E-06 39.3 6.7 95 194-294 1-114 (117)
449 PRK14618 NAD(P)H-dependent gly 94.3 0.51 1.1E-05 44.4 10.9 95 194-296 4-105 (328)
450 PRK00121 trmB tRNA (guanine-N( 94.2 0.74 1.6E-05 40.1 11.2 98 193-295 40-156 (202)
451 TIGR00446 nop2p NOL1/NOP2/sun 94.2 0.96 2.1E-05 41.2 12.3 103 188-297 66-201 (264)
452 PRK06849 hypothetical protein; 94.2 0.42 9.1E-06 46.1 10.5 96 193-291 3-103 (389)
453 PRK08328 hypothetical protein; 94.2 0.34 7.4E-06 43.2 9.2 36 193-228 26-61 (231)
454 PRK12745 3-ketoacyl-(acyl-carr 94.2 0.28 6E-06 43.9 8.7 77 195-273 3-90 (256)
455 PRK05447 1-deoxy-D-xylulose 5- 94.2 0.63 1.4E-05 44.5 11.2 94 195-293 2-120 (385)
456 PRK07792 fabG 3-ketoacyl-(acyl 94.2 0.35 7.5E-06 45.0 9.5 79 193-273 11-99 (306)
457 PRK14982 acyl-ACP reductase; P 94.2 0.23 4.9E-06 46.9 8.2 94 192-298 153-249 (340)
458 PLN02256 arogenate dehydrogena 94.1 0.56 1.2E-05 43.7 10.8 93 189-296 31-128 (304)
459 PRK06997 enoyl-(acyl carrier p 94.1 0.32 7E-06 43.9 9.1 79 193-273 5-94 (260)
460 PRK00536 speE spermidine synth 94.1 0.2 4.2E-06 45.6 7.4 100 192-296 71-172 (262)
461 PRK04457 spermidine synthase; 94.1 1.2 2.5E-05 40.6 12.5 96 192-293 65-175 (262)
462 PRK07889 enoyl-(acyl carrier p 94.1 0.27 5.7E-06 44.4 8.3 79 193-273 6-95 (256)
463 COG0421 SpeE Spermidine syntha 94.1 0.74 1.6E-05 42.3 11.1 97 195-294 78-189 (282)
464 TIGR00138 gidB 16S rRNA methyl 94.1 0.32 7E-06 41.6 8.3 94 193-294 42-141 (181)
465 cd00757 ThiF_MoeB_HesA_family 94.0 0.46 1E-05 42.2 9.6 36 193-228 20-55 (228)
466 TIGR00715 precor6x_red precorr 94.0 0.18 3.9E-06 45.7 6.9 73 196-273 2-75 (256)
467 TIGR01289 LPOR light-dependent 94.0 0.45 9.8E-06 44.4 9.9 78 194-273 3-91 (314)
468 COG3288 PntA NAD/NADP transhyd 94.0 0.37 7.9E-06 44.3 8.7 130 188-320 158-308 (356)
469 PF01210 NAD_Gly3P_dh_N: NAD-d 93.9 0.33 7.2E-06 40.4 8.1 84 196-286 1-91 (157)
470 PF05368 NmrA: NmrA-like famil 93.9 0.26 5.7E-06 43.6 7.9 70 197-272 1-73 (233)
471 cd01487 E1_ThiF_like E1_ThiF_l 93.9 0.45 9.7E-06 40.5 8.9 33 196-228 1-33 (174)
472 COG0031 CysK Cysteine synthase 93.9 2.5 5.5E-05 39.0 14.2 58 187-245 55-115 (300)
473 PRK12935 acetoacetyl-CoA reduc 93.9 0.38 8.3E-06 42.7 8.9 79 193-273 5-94 (247)
474 COG2084 MmsB 3-hydroxyisobutyr 93.9 0.9 1.9E-05 41.8 11.2 89 196-298 2-98 (286)
475 PRK03562 glutathione-regulated 93.9 0.36 7.8E-06 49.6 9.7 77 194-275 400-476 (621)
476 PLN02986 cinnamyl-alcohol dehy 93.9 0.33 7.2E-06 45.2 8.8 38 193-231 4-42 (322)
477 TIGR02992 ectoine_eutC ectoine 93.8 0.85 1.8E-05 42.9 11.4 97 191-299 126-228 (326)
478 PRK13403 ketol-acid reductoiso 93.8 0.71 1.5E-05 43.2 10.5 87 192-294 14-104 (335)
479 PRK14903 16S rRNA methyltransf 93.8 0.93 2E-05 44.4 11.9 105 188-298 232-369 (431)
480 PRK10669 putative cation:proto 93.8 0.38 8.3E-06 48.8 9.6 94 195-294 418-514 (558)
481 COG0569 TrkA K+ transport syst 93.7 0.55 1.2E-05 41.7 9.5 73 196-273 2-76 (225)
482 PRK11188 rrmJ 23S rRNA methylt 93.7 0.96 2.1E-05 39.7 10.9 100 191-297 49-167 (209)
483 PRK09134 short chain dehydroge 93.7 0.38 8.3E-06 43.2 8.6 79 193-273 8-97 (258)
484 PF07991 IlvN: Acetohydroxy ac 93.7 0.67 1.4E-05 38.7 9.1 87 193-295 3-94 (165)
485 PLN02686 cinnamoyl-CoA reducta 93.7 0.38 8.3E-06 46.0 9.0 45 191-236 50-95 (367)
486 TIGR01829 AcAcCoA_reduct aceto 93.7 0.41 8.9E-06 42.3 8.7 77 195-273 1-88 (242)
487 PRK08291 ectoine utilization p 93.7 1.1 2.4E-05 42.2 12.0 96 192-299 130-231 (330)
488 PF01408 GFO_IDH_MocA: Oxidore 93.6 1.7 3.7E-05 33.9 11.3 88 196-296 2-93 (120)
489 PRK07578 short chain dehydroge 93.6 1 2.2E-05 38.6 10.9 63 196-273 2-65 (199)
490 PRK06947 glucose-1-dehydrogena 93.6 0.35 7.5E-06 43.0 8.2 77 195-273 3-90 (248)
491 PRK12825 fabG 3-ketoacyl-(acyl 93.6 0.46 1E-05 41.9 9.0 78 193-272 5-93 (249)
492 PRK11933 yebU rRNA (cytosine-C 93.6 1 2.3E-05 44.5 12.0 102 190-297 110-244 (470)
493 PLN02896 cinnamyl-alcohol dehy 93.6 0.5 1.1E-05 44.7 9.7 42 191-233 7-49 (353)
494 TIGR01830 3oxo_ACP_reduc 3-oxo 93.6 0.75 1.6E-05 40.4 10.3 75 197-273 1-86 (239)
495 PRK14176 bifunctional 5,10-met 93.6 0.67 1.5E-05 42.6 9.9 94 173-297 143-238 (287)
496 PLN02490 MPBQ/MSBQ methyltrans 93.6 0.44 9.5E-06 45.1 8.9 99 192-296 112-216 (340)
497 PRK05562 precorrin-2 dehydroge 93.6 2.2 4.8E-05 37.7 12.8 100 193-303 24-124 (223)
498 cd05211 NAD_bind_Glu_Leu_Phe_V 93.5 0.82 1.8E-05 40.4 10.1 47 192-238 21-77 (217)
499 PRK05708 2-dehydropantoate 2-r 93.5 0.41 8.9E-06 44.6 8.7 97 195-296 3-105 (305)
500 PRK07201 short chain dehydroge 93.5 0.33 7.1E-06 50.1 8.8 78 194-273 371-458 (657)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=9e-60 Score=423.16 Aligned_cols=339 Identities=44% Similarity=0.789 Sum_probs=321.4
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
++++|.++.++++||+++++.+++|++||||||+.|+|+|++|.+.++|.. .+|.++|||++|+|++||++|+++++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpG 80 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPG 80 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCceecccccccEEEEecCCccccCCC
Confidence 368899999999999999999999999999999999999999999999987 789999999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccc-cccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVL-GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~-~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
|+|+......|+.|.+|+.|.+|+|... ...+.|.. .||+.++..+|.+.|++-+.++|+||.++++..++|++++.+
T Consensus 81 DhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 81 DHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 9999999999999999999999999966 34446766 899999999999999999999999999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~ 247 (353)
++.++.+.|...|++.++.+.+++++|++|.|.|.|++|++++|-|+..|+++||+++.+++|++++++||+++++|.++
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (353)
.. +..+.+.+++++++|++|||+|+...++.+++++.+ ||+.+.+|.......+++++..|..+.+++|+++++..++
T Consensus 240 ~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~ 317 (366)
T COG1062 240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR 317 (366)
T ss_pred hh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence 22 699999999999999999999999999999999999 6999999999888888899998888999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCccCCC
Q 018627 328 TDLPSLVNRYLKKVRNTRKPSCGNC 352 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~~~li~~~~ 352 (353)
.|++++++|+.+|||++++||+++.
T Consensus 318 ~diP~lv~~y~~Gkl~~d~lvt~~~ 342 (366)
T COG1062 318 SDIPRLVDLYMAGKLPLDRLVTHTI 342 (366)
T ss_pred cchhHHHHHHHcCCCchhHHhhccc
Confidence 9999999999999999999999864
No 2
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-59 Score=412.03 Aligned_cols=345 Identities=53% Similarity=0.958 Sum_probs=328.5
Q ss_pred CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC
Q 018627 8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE 84 (353)
Q Consensus 8 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~ 84 (353)
..+.++||.+.+++++||.++++.+++|+.+||+||+.++++|++|...|.|.. .+|.++|||++|+|+.+|.+|++
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 356799999999999999999999999999999999999999999999999884 78999999999999999999999
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP 163 (353)
+++||+|+......|++|.+|+++..|.|.+..... .+.+..||..|+.-+|+++||+-+..+|+||.+++...+++|+
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 999999999999999999999999999999986544 5666469999999999999999888899999999999999999
Q ss_pred CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (353)
Q Consensus 164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~ 243 (353)
+..+++.++.+.|.++|+|+|.++.+++++|+++.|.|-|++|+++++-||+.|+++||++|.+++|.+.++++|+++++
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i 242 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI 242 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC
Q 018627 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (353)
|..+......+.+++++++++|+-|||+|+.+.+.+++.....+||.-|.+|.....+.+.+.++.++.+.++.|+.++.
T Consensus 243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG 322 (375)
T KOG0022|consen 243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGG 322 (375)
T ss_pred ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEeccc
Confidence 98865556889999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCCccCCC
Q 018627 324 WKPKTDLPSLVNRYLKKVRNTRKPSCGNC 352 (353)
Q Consensus 324 ~~~~~~~~~~~~~l~~g~i~~~~li~~~~ 352 (353)
|+.+.+++.+.+.+.+++++++++|+|+-
T Consensus 323 ~K~~~~iP~lV~~y~~~~l~ld~~ITh~l 351 (375)
T KOG0022|consen 323 FKSKSDIPKLVKDYMKKKLNLDEFITHEL 351 (375)
T ss_pred ccchhhhhHHHHHHHhCccchhhhhhccc
Confidence 99999999999999999999999999863
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=5.6e-59 Score=426.66 Aligned_cols=303 Identities=30% Similarity=0.433 Sum_probs=273.2
Q ss_pred cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCC
Q 018627 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
+++|||+++.++++++++++++.|+|+++||+|+|+++|+|++|++.+.|.+ .+|+++|||.+|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 3589999999999999999999999999999999999999999999999988 7899999999999999999999999
Q ss_pred CCCeEEe-ecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627 87 EGEHVLT-VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 87 vGd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
+||||.+ +...+|++|.+|+.|++++|++.....+. ..|+||||+++|+++++++|++
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~---------------------~~GGyaeyv~v~~~~~~~iP~~ 139 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT---------------------TDGGYAEYVVVPARYVVKIPEG 139 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccccee---------------------ecCcceeEEEEchHHeEECCCC
Confidence 9999988 88889999999999999999986643222 3369999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+++++||.+.|+..|.|++| +..++++|++|+|+|.|++|++++|+|+++|+ +|++++++++|++.++++|++++++.
T Consensus 140 ~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~ 217 (339)
T COG1064 140 LDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINS 217 (339)
T ss_pred CChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEc
Confidence 99999999999999999998 55899999999999999999999999999998 99999999999999999999999987
Q ss_pred CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCC
Q 018627 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW 324 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~ 324 (353)
+ +.+..+.+++. +|+++|+++ +..++.+++.|+++ |+++++|.........++... ++++++|.|+..++
T Consensus 218 ~--~~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~- 288 (339)
T COG1064 218 S--DSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT- 288 (339)
T ss_pred C--CchhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC-
Confidence 6 56667777663 999999999 89999999999997 999999998522323344443 46799999999887
Q ss_pred CCCCcHHHHHHHHHcCCCCCCC
Q 018627 325 KPKTDLPSLVNRYLKKVRNTRK 346 (353)
Q Consensus 325 ~~~~~~~~~~~~l~~g~i~~~~ 346 (353)
+.|+++++++..+|+++|.-
T Consensus 289 --~~d~~e~l~f~~~g~Ikp~i 308 (339)
T COG1064 289 --RADLEEALDFAAEGKIKPEI 308 (339)
T ss_pred --HHHHHHHHHHHHhCCceeeE
Confidence 57899999999999998754
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-57 Score=406.51 Aligned_cols=313 Identities=25% Similarity=0.378 Sum_probs=280.9
Q ss_pred eeeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~ 84 (353)
+|+|+++.+++. ++++++|.|++ .|+||+|++.++|||+||+|.|.... +.|+++|||.+|+|+++|+.|++
T Consensus 4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~ 82 (354)
T KOG0024|consen 4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH 82 (354)
T ss_pred ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence 688999999998 99999999997 99999999999999999999997766 57999999999999999999999
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~ 164 (353)
++|||||+..|..+|..|+.||+|+||.|+...+-..+.. .|++++|+++++++++|+|+
T Consensus 83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~--------------------~G~la~y~~~~~dfc~KLPd 142 (354)
T KOG0024|consen 83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPV--------------------DGTLAEYYVHPADFCYKLPD 142 (354)
T ss_pred cccCCeEEecCCCccccchhhhCcccccCCccccccCCCc--------------------CCceEEEEEechHheeeCCC
Confidence 9999999999999999999999999999999988665543 25999999999999999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
++|++++|++. ++++++||. ++++++.|++|||+|+|++|+.+...|+++|+++|+.++..+.|++.++++|++.+.+
T Consensus 143 ~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~ 220 (354)
T KOG0024|consen 143 NVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDP 220 (354)
T ss_pred CCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEee
Confidence 99999999998 899999998 7799999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCC--ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeec
Q 018627 245 PNDNN--EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321 (353)
Q Consensus 245 ~~~~~--~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (353)
..... ..+.+.+....+. .+|+.|||+|....++.++..++.+ |+++++|+.....++++... .++++.++|++-
T Consensus 221 ~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~fr 298 (354)
T KOG0024|consen 221 SSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGSFR 298 (354)
T ss_pred ccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeeeee
Confidence 65322 3344455554443 6999999999988999999999997 99999999887667665554 478999999874
Q ss_pred CCCCCCCcHHHHHHHHHcCCCCCCCCccCCC
Q 018627 322 GGWKPKTDLPSLVNRYLKKVRNTRKPSCGNC 352 (353)
Q Consensus 322 ~~~~~~~~~~~~~~~l~~g~i~~~~li~~~~ 352 (353)
+. ..+++.+++++++||+++++||||+-
T Consensus 299 y~---~~~y~~ai~li~sGki~~k~lIT~r~ 326 (354)
T KOG0024|consen 299 YC---NGDYPTAIELVSSGKIDVKPLITHRY 326 (354)
T ss_pred ec---cccHHHHHHHHHcCCcCchhheeccc
Confidence 44 46899999999999999999999973
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-52 Score=369.89 Aligned_cols=314 Identities=25% Similarity=0.403 Sum_probs=276.2
Q ss_pred CCccceeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCC
Q 018627 7 QPQVITCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPG 81 (353)
Q Consensus 7 ~~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~ 81 (353)
+..|.+.++|.+..++. ++++.+++.|+|+++||+|+|+++|||++|++.|.+.+ .+|+++|||.+|+|+++|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~ 83 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN 83 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence 45677999999999988 57889999999999999999999999999999999887 89999999999999999999
Q ss_pred CCCCCCCCeE-EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627 82 VTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (353)
Q Consensus 82 ~~~~~vGd~V-~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~ 160 (353)
|++|++|||| +.+...+|..|.+|+++..++|++....++|.. .||+.. .|+|++|+++++.+++
T Consensus 84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~-~DGt~~-------------~ggf~~~~~v~~~~a~ 149 (360)
T KOG0023|consen 84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVY-HDGTIT-------------QGGFQEYAVVDEVFAI 149 (360)
T ss_pred cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccc-cCCCCc-------------cCccceeEEEeeeeEE
Confidence 9999999999 556778999999999999999999988888888 777433 4799999999999999
Q ss_pred ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCC
Q 018627 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGV 239 (353)
Q Consensus 161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~ 239 (353)
+||++++++.||.+.|+..|.|.+| ...++.||+++-|.|+|++|.+++|+|+++|. +|+++++++ +|.+.++.+||
T Consensus 150 kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGA 227 (360)
T KOG0023|consen 150 KIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGA 227 (360)
T ss_pred ECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCc
Confidence 9999999999999999999999998 56788899999999997799999999999999 999998887 66777788999
Q ss_pred ceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEee
Q 018627 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS 319 (353)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 319 (353)
+.+++..+ +.++.+.+...+++.+|-+.+- ....++.++.+++++ |++|++|.+.....++..++ .++.++|.|+
T Consensus 228 d~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~~~~~~~~~l-il~~~~I~GS 302 (360)
T KOG0023|consen 228 DVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEKPLKLDTFPL-ILGRKSIKGS 302 (360)
T ss_pred ceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCCcccccchhh-hcccEEEEee
Confidence 99988764 6889999998877777777765 346789999999998 99999999876444443333 3678999999
Q ss_pred ecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627 320 LFGGWKPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 320 ~~~~~~~~~~~~~~~~~l~~g~i~~ 344 (353)
..++ +.+.++++++..+|.+.+
T Consensus 303 ~vG~---~ket~E~Ldf~a~~~ik~ 324 (360)
T KOG0023|consen 303 IVGS---RKETQEALDFVARGLIKS 324 (360)
T ss_pred cccc---HHHHHHHHHHHHcCCCcC
Confidence 9988 467888888888887764
No 6
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=3.1e-51 Score=392.65 Aligned_cols=350 Identities=80% Similarity=1.316 Sum_probs=287.7
Q ss_pred CccccCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCC
Q 018627 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPG 81 (353)
Q Consensus 2 ~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~ 81 (353)
|++..+|....|||+++.++++.++++++|.|+|+++||+|||.++|+|++|++.+.+...+|.++|||++|+|+++|++
T Consensus 2 ~~~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~~~p~i~GhE~~G~V~~vG~~ 81 (378)
T PLN02827 2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQALFPRIFGHEASGIVESIGEG 81 (378)
T ss_pred CccccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCCCCCeeecccceEEEEEcCCC
Confidence 45667787789999999998877999999999999999999999999999999988775467899999999999999999
Q ss_pred CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (353)
Q Consensus 82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~ 161 (353)
+++|++||||++.+...|++|.+|+.|.+++|+.......|....++..++...|...++++..|+|+||+.+|++.+++
T Consensus 82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~ 161 (378)
T PLN02827 82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
T ss_pred CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence 99999999999998889999999999999999875432222211111111111222222222347999999999999999
Q ss_pred CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (353)
Q Consensus 162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~ 241 (353)
+|+++++++++.+.+.+.++|+++++..++++|++|||+|+|++|++++|+|+++|++.|+++++++++.+.++++|+++
T Consensus 162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 162 VDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence 99999999999999899999998877788999999999999999999999999999967889988999999999999999
Q ss_pred EeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeec
Q 018627 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (353)
++++.+.+.++.+.+++++++++|++||++|....+..+++.+++++|+++.+|.......+......+++++++.|+..
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF 321 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence 98876323467777877776689999999998777899999999933999999986543333322233467999999988
Q ss_pred CCCCCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627 322 GGWKPKTDLPSLVNRYLKKVRNTRKPSCGN 351 (353)
Q Consensus 322 ~~~~~~~~~~~~~~~l~~g~i~~~~li~~~ 351 (353)
+.+....++.++++++++|+|+++++|++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~ 351 (378)
T PLN02827 322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHN 351 (378)
T ss_pred CCCchhhhHHHHHHHHHcCCCChHHheEEE
Confidence 776555689999999999999998888753
No 7
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=5.2e-51 Score=391.71 Aligned_cols=346 Identities=51% Similarity=0.950 Sum_probs=286.3
Q ss_pred ccCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCC
Q 018627 5 IKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGP 80 (353)
Q Consensus 5 ~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~ 80 (353)
.+++.|++|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++|+
T Consensus 3 ~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~ 82 (381)
T PLN02740 3 ETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGE 82 (381)
T ss_pred cccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCC
Confidence 355677899999999998889999999999999999999999999999999988754 4689999999999999999
Q ss_pred CCCCCCCCCeEEeecccCCCCCcccccCCCCCccccccccccc-ccCCccccccc--cCCccccccCccceeeeEEEeCC
Q 018627 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV-MHSDQQTRFSI--KGKPVYHYCAVSSFSEYTVVHSG 157 (353)
Q Consensus 81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~-~~~~g~~~~~~--~~~~~~~~~~~g~~a~~~~~~~~ 157 (353)
++++|++||||++.+..+|+.|.+|+.|+++.|++......+. ...+|..+++. .+...++....|+|+||+++|.+
T Consensus 83 ~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~ 162 (381)
T PLN02740 83 GVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSA 162 (381)
T ss_pred CCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehH
Confidence 9999999999999999999999999999999998865321100 00011000000 00111112224799999999999
Q ss_pred ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (353)
Q Consensus 158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 237 (353)
.++++|+++++++++.+++++.|||+++++.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++
T Consensus 163 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~ 242 (381)
T PLN02740 163 CVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEM 242 (381)
T ss_pred HeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHc
Confidence 99999999999999999999999999987888999999999999999999999999999996799999999999999999
Q ss_pred CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEE
Q 018627 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 317 (353)
Q Consensus 238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 317 (353)
|++.++++.+...++.+.+++++++++|++||++|.+..+..++.++++++|+++.+|.......+++.+..+++++++.
T Consensus 243 Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~ 322 (381)
T PLN02740 243 GITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSIT 322 (381)
T ss_pred CCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEE
Confidence 99999887632345777888777668999999999878899999999883399999998755334555555456789999
Q ss_pred eeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627 318 GSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 318 g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~ 350 (353)
|++.+.+....++.++++++.+|++++.+++++
T Consensus 323 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~ 355 (381)
T PLN02740 323 GSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITH 355 (381)
T ss_pred EEecCCCCcHHHHHHHHHHHHcCCCChHHheeE
Confidence 998877655568999999999999998888765
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.6e-50 Score=385.60 Aligned_cols=335 Identities=35% Similarity=0.618 Sum_probs=279.2
Q ss_pred eeEEEEecCC--------CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCC
Q 018627 13 CKAAVAWGAG--------QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (353)
Q Consensus 13 ~~a~~~~~~~--------~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~ 82 (353)
|||+++.+++ +.++++++|.|+|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~v 80 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAAGVVVEVGEGV 80 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCCCCCccCCccceeEEEEeCCCC
Confidence 7899999865 349999999999999999999999999999999988864 568899999999999999999
Q ss_pred CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (353)
Q Consensus 83 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~ 161 (353)
+++++||||++.+...|+.|..|+.|.++.|....... .|.. .+|+.++..++...++..+.|+|+||+.+|++.+++
T Consensus 81 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 81 TDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 99999999999888899999999999999998764321 1111 111111111111111112236999999999999999
Q ss_pred CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (353)
Q Consensus 162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~ 241 (353)
+|+++++++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 239 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999999999999878888999999999999999999999999999977999999999999999999999
Q ss_pred EeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeee
Q 018627 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL 320 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 320 (353)
++++. +.++.+.+++.+++++|++|||+|.+..+..+++.++++ |+++.+|.......+.+....+ .+++++.|++
T Consensus 240 ~i~~~--~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 240 TVNAG--DPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred EeCCC--chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 98876 467778888877668999999999878899999999997 9999999865323344454444 4699999998
Q ss_pred cCCCCCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627 321 FGGWKPKTDLPSLVNRYLKKVRNTRKPSCGN 351 (353)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~g~i~~~~li~~~ 351 (353)
.+.+...++++++++++++|++++++++++.
T Consensus 317 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~ 347 (371)
T cd08281 317 MGSCVPRRDIPRYLALYLSGRLPVDKLLTHR 347 (371)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCchhheeee
Confidence 8776556789999999999999998888753
No 9
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=5e-50 Score=383.17 Aligned_cols=338 Identities=45% Similarity=0.842 Sum_probs=280.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++..++++++++++|.|+|+++||+|||.++++|++|++.+.|.. .+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 8899999998889999999999999999999999999999999888764 4689999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCccccccc-ccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~ 168 (353)
||++.+...|+.|.+|+.|.++.|.+.... ..|.. .+|..++..+|.+.++....|+|+||+++|++.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999998899999999999999999875321 11222 2232222233333333333479999999999999999999999
Q ss_pred hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|++.++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998788899999999999999999999999999999779999999999999999999998887632
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (353)
+.++.+.+++++++++|++|||+|.+..+..+++++++++|+++.+|.......+++.+..++++..+.++..+.+..++
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 34566777777766899999999987788999999987339999999864323344444444455567777665544456
Q ss_pred cHHHHHHHHHcCCCCCCCCccCC
Q 018627 329 DLPSLVNRYLKKVRNTRKPSCGN 351 (353)
Q Consensus 329 ~~~~~~~~l~~g~i~~~~li~~~ 351 (353)
++.++++++++|++++++++++.
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~ 343 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHT 343 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEE
Confidence 79999999999999998888754
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.5e-49 Score=379.89 Aligned_cols=339 Identities=49% Similarity=0.918 Sum_probs=283.5
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
+|||+++..++++++++++|.|.|+++||+|||+++++|++|++.+.|.. .+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999888889999999999999999999999999999999887754 568899999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCccccccc-ccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
|||++.+...|++|.+|+.|+++.|.+.... +.|.. .+|..++..+|.+.++....|+|+||+.++++.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999998999999999999999999875321 12222 233222222333334333457999999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~ 247 (353)
+++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++.+
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999999878888999999999998999999999999999977999999999999999999999998763
Q ss_pred CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (353)
.+.++.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+...+..+.++..+.++..+.|..+
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 22357778888776789999999998778899999998734999999976432334444444455667788877777667
Q ss_pred CcHHHHHHHHHcCCCCCCCCccCC
Q 018627 328 TDLPSLVNRYLKKVRNTRKPSCGN 351 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~~~li~~~ 351 (353)
+++.++++++.+|++++.+++++.
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~ 344 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHT 344 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeee
Confidence 889999999999999998888753
No 11
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.6e-49 Score=379.99 Aligned_cols=339 Identities=61% Similarity=1.098 Sum_probs=283.3
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
+|||+++.+++++++++++|.|+|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence 79999999988889999999999999999999999999999999888764 468999999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
|||++.+...|++|..|+.|.++.|.+..... .|....++...+...|...|+....|+|+||+++++..++++|++++
T Consensus 82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~ 161 (369)
T cd08301 82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP 161 (369)
T ss_pred CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence 99999999999999999999999998754211 11110111111111222223332346999999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~ 247 (353)
+++++.+++.+.|+|+++++..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++|++.++++.+
T Consensus 162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 241 (369)
T cd08301 162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD 241 (369)
T ss_pred HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence 99999999999999999888889999999999999999999999999999877999999999999999999999888763
Q ss_pred CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (353)
.+..+.+.+++.+++++|++||++|.+..+..+++++++++|+++.+|.......+++.+..+++++++.|++.+.+..+
T Consensus 242 ~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 321 (369)
T cd08301 242 HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPK 321 (369)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChH
Confidence 22456677777776689999999998778899999999922999999987643445555554567999999988777666
Q ss_pred CcHHHHHHHHHcCCCCCCCCccC
Q 018627 328 TDLPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~~~li~~ 350 (353)
.+++++++++.+|++++++++++
T Consensus 322 ~~~~~~~~~~~~g~~~~~~~i~~ 344 (369)
T cd08301 322 TDLPNLVEKYMKKELELEKFITH 344 (369)
T ss_pred HHHHHHHHHHHcCCCCcHHheee
Confidence 78999999999999998887765
No 12
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=5.5e-49 Score=375.70 Aligned_cols=337 Identities=50% Similarity=0.937 Sum_probs=285.1
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
+|||+++..++++++++++|.|.++++||+|||+++++|++|++.+.|.. .+|.++|||++|+|+++|++++++++||
T Consensus 2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 81 (365)
T cd08277 2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPGD 81 (365)
T ss_pred ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCCCCCCeecccceeEEEEeeCCCCccCCCCC
Confidence 68999999888889999999999999999999999999999999988764 5678999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
||++.+...|++|.+|+.|.++.|++..+...|.. .++..+....|...++....|+|+||++++.+.++++|++++++
T Consensus 82 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~ 160 (365)
T cd08277 82 KVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLE 160 (365)
T ss_pred EEEECCCCCCCCCchhcCcCcccCcCccccccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHH
Confidence 99999889999999999999999998776555554 33322222233333333334799999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~ 249 (353)
+++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|+++++++.+..
T Consensus 161 ~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~ 240 (365)
T cd08277 161 HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSD 240 (365)
T ss_pred HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccccc
Confidence 99999999999999987888899999999998899999999999999997799999999999999999999998876323
Q ss_pred ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCc
Q 018627 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD 329 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 329 (353)
..+.+.+++++++++|++|||+|.+..+..+++++++++|+++.+|.... ..+++.+..++.++++.|++.+.+..+.+
T Consensus 241 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 319 (365)
T cd08277 241 KPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSRSD 319 (365)
T ss_pred chHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChHHH
Confidence 34566777766668999999999877889999999873399999998653 23344454455589999998887765678
Q ss_pred HHHHHHHHHcCCCCCCCCccC
Q 018627 330 LPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 330 ~~~~~~~l~~g~i~~~~li~~ 350 (353)
+++++++++++++++++++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~i~~ 340 (365)
T cd08277 320 VPKLVSKYMNKKFDLDELITH 340 (365)
T ss_pred HHHHHHHHHCCCcChhHheee
Confidence 999999999999998888875
No 13
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=3.6e-49 Score=376.05 Aligned_cols=328 Identities=31% Similarity=0.495 Sum_probs=276.5
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
||||+++.+++++++++++|.|+|+++||+|||.++++|++|++.+.|.. .+|.++|||++|+|+++|+++++|++||
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 80 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGD 80 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccccCCcccccceEEEEEEeCCCCcccCCCC
Confidence 69999999999889999999999999999999999999999999888754 5789999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
||++.+...|+.|..|+.|++++|.............+|. ........|+|+||+.+|++.++++|++++++
T Consensus 81 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~--------~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~ 152 (358)
T TIGR03451 81 YVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGT--------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPA 152 (358)
T ss_pred EEEEccCCCCCCChHHhCcCcccCcCccccccccccccCc--------ccccccccccccceEEEehhheEECCCCCChh
Confidence 9999999999999999999999997532211100001110 00000013699999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~ 249 (353)
+++.+++.+.++|+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|++.++++. +
T Consensus 153 ~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~--~ 230 (358)
T TIGR03451 153 AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS--G 230 (358)
T ss_pred HhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC--C
Confidence 99999999999999887778899999999999999999999999999996699999999999999999999999876 4
Q ss_pred ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 250 ~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (353)
.++.+.+++.+++ ++|++|||+|++..+..+++.++++ |+++.+|.......+.++...+ .+++++.+++.+.....
T Consensus 231 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 309 (358)
T TIGR03451 231 TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPE 309 (358)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcH
Confidence 5677888887776 8999999999877899999999997 9999999865433344444333 45899998876544446
Q ss_pred CcHHHHHHHHHcCCCCCCCCccC
Q 018627 328 TDLPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~~~li~~ 350 (353)
++++++++++++|++++.++|++
T Consensus 310 ~~~~~~~~l~~~g~l~~~~~i~~ 332 (358)
T TIGR03451 310 RDFPMLVDLYLQGRLPLDAFVTE 332 (358)
T ss_pred HHHHHHHHHHHcCCCCchheEEE
Confidence 78999999999999999888775
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=6.9e-48 Score=364.37 Aligned_cols=308 Identities=29% Similarity=0.430 Sum_probs=265.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
|||+++.+++. ++++++|.|+|+++||+||+.++++|++|++.+.+.. .+|.++|||++|+|+++|++++++++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 78999988765 9999999999999999999999999999998876653 257899999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~ 168 (353)
|||+..+...|+.|..|+.|+++.|.+... ..|.. . .|+|+||+.+|.+.++++|+++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~g~~-~------------------~G~~ae~~~v~~~~~~~~P~~~~~ 139 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA-AYGWN-R------------------DGGHAEYMLVPEKTLIPLPDDLSF 139 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc-ccccC-C------------------CCcceeEEEechHHeEECCCCCCH
Confidence 999999999999999999999999987543 22322 1 259999999999999999999999
Q ss_pred hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
++|+.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++|++.+++++
T Consensus 140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~-- 216 (339)
T cd08239 140 ADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG-- 216 (339)
T ss_pred HHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC--
Confidence 99999999999999998 557889999999999999999999999999995599999999999999999999999886
Q ss_pred CccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 249 ~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (353)
+.+ .+.+++.+++ ++|++|||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.|++... .
T Consensus 217 ~~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~ 290 (339)
T cd08239 217 QDD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---V 290 (339)
T ss_pred cch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---H
Confidence 334 5667777766 8999999999877778899999997 99999997654 33332223345799999987654 4
Q ss_pred CcHHHHHHHHHcCCCCCCCCccC
Q 018627 328 TDLPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~~~li~~ 350 (353)
+++.++++++++|++++.++++.
T Consensus 291 ~~~~~~~~~~~~g~i~~~~~i~~ 313 (339)
T cd08239 291 PDMEECAEFLARHKLEVDRLVTH 313 (339)
T ss_pred HHHHHHHHHHHcCCCChhHeEEE
Confidence 68999999999999999888864
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=7.1e-47 Score=358.23 Aligned_cols=307 Identities=22% Similarity=0.358 Sum_probs=253.5
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhc-cCC-----CCCcccccceeEEEEEeCCCCCC
Q 018627 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTE 84 (353)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~~~~ 84 (353)
..++|.+++++++ ++++++|.| ++++||||||.++|||++|++.+. +.. .+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 3688999998888 999999997 689999999999999999998774 321 56899999999999999 6789
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~ 164 (353)
|++||||+..+..+|++|.+|+.|+++.|.+..+.+.+..+. ...|+|+||++++++.++++|+
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~----------------~~~G~~aey~~v~~~~~~~~P~ 142 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFP----------------HVDGGFTRYKVVDTAQCIPYPE 142 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccC----------------CCCCceeeeEEechHHeEECCC
Confidence 999999999999999999999999999998865421110000 0126999999999999999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
++++++++.. .++++||+++.+ ....+|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|++.+++
T Consensus 143 ~l~~~~aa~~-~~~~~a~~al~~-~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~ 220 (343)
T PRK09880 143 KADEKVMAFA-EPLAVAIHAAHQ-AGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN 220 (343)
T ss_pred CCCHHHHHhh-cHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEec
Confidence 9999876654 488899999844 56668999999999999999999999999977999999999999999999999998
Q ss_pred CCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (353)
+. +.++.+..+ ..+++|++|||+|.+..+..++++++++ |+++.+|.......+ +...+ .+++++.|++..
T Consensus 221 ~~--~~~~~~~~~--~~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~--~~~~~~~k~~~i~g~~~~- 292 (343)
T PRK09880 221 PQ--NDDLDHYKA--EKGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPPEF--PMMTLIVKEISLKGSFRF- 292 (343)
T ss_pred CC--cccHHHHhc--cCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCcc--CHHHHHhCCcEEEEEeec-
Confidence 76 334433222 1236999999999877889999999997 999999976543333 33333 569999988643
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627 324 WKPKTDLPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 324 ~~~~~~~~~~~~~l~~g~i~~~~li~~ 350 (353)
.++++++++++++|+|++.+++++
T Consensus 293 ---~~~~~~~~~l~~~g~i~~~~~i~~ 316 (343)
T PRK09880 293 ---TEEFNTAVSWLANGVINPLPLLSA 316 (343)
T ss_pred ---cccHHHHHHHHHcCCCCchhheEE
Confidence 368999999999999999888765
No 16
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=9.3e-47 Score=357.10 Aligned_cols=315 Identities=29% Similarity=0.381 Sum_probs=255.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCc-ccccceeEEEEEeCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR-IFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~-~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
|++++++.++...++++.+.|.+.|+||+|||.++|||+||++.+++.. ..|. ++|||++|+|+++| .+..+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 5677777777645578887778899999999999999999999999875 4445 99999999999999 77889999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE-CCCCCC
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK-VSSIAP 167 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~-iP~~l~ 167 (353)
|||++.+..+|+.|.+|+.|.+|.|++...........+ -.|+|+||+++|.+.+++ +|+++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~----------------~~G~~aEyv~vp~~~~~~~~pd~~- 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG----------------IDGGFAEYVRVPADFNLAKLPDGI- 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCC----------------CCCceEEEEEeccccCeecCCCCC-
Confidence 999999999999999999999999995542211110000 125999999999765555 58888
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPN 246 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~ 246 (353)
..+++++..++++++++........++.+|+|+|+|++|++++++++.+|+++|++++.+++|++++++ .|++.+++..
T Consensus 143 ~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~ 222 (350)
T COG1063 143 DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPS 222 (350)
T ss_pred ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCc
Confidence 566666666999998774345555666699999999999999999999999999999999999999999 6666666554
Q ss_pred CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCC
Q 018627 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW 324 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~ 324 (353)
..+....+.+.+++ ++|++|||+|.+..+..+++.++++ |+++.+|....... .+.... +.+++++.|+....
T Consensus 223 --~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~~- 297 (350)
T COG1063 223 --EDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRPS- 297 (350)
T ss_pred --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCCC-
Confidence 22667777788888 9999999999988899999999997 99999999876442 333322 45799999984322
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627 325 KPKTDLPSLVNRYLKKVRNTRKPSCGN 351 (353)
Q Consensus 325 ~~~~~~~~~~~~l~~g~i~~~~li~~~ 351 (353)
.+.+++.+++++.+|++++.++++++
T Consensus 298 -~~~~~~~~~~ll~~g~i~~~~lit~~ 323 (350)
T COG1063 298 -GREDFERALDLLASGKIDPEKLITHR 323 (350)
T ss_pred -CcccHHHHHHHHHcCCCChhHceEee
Confidence 24689999999999999999998765
No 17
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=5.4e-46 Score=347.76 Aligned_cols=283 Identities=28% Similarity=0.384 Sum_probs=243.8
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++.+.+.+ ++++++|.|.|++|||||||.+++||+.|...+.|.. ++|+++|.|++|+|+++|++++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999887766 8999999999999999999999999999999998863 5899999999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||||+... ..| ..|+|+||+.+|++.++++|+++
T Consensus 81 ~GdrV~~~~-~~~--------------------------------------------~~G~~AEy~~v~a~~~~~~P~~l 115 (326)
T COG0604 81 VGDRVAALG-GVG--------------------------------------------RDGGYAEYVVVPADWLVPLPDGL 115 (326)
T ss_pred CCCEEEEcc-CCC--------------------------------------------CCCcceeEEEecHHHceeCCCCC
Confidence 999999873 100 12699999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++++||++++++.|||+++.+..++++|++|||+|+ |++|.+++|+|+++|+ +++++.+++++.+.++++|++++++|
T Consensus 116 s~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y 194 (326)
T COG0604 116 SFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194 (326)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 999999999999999999999899999999999986 9999999999999998 66666677777779999999999998
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 323 (353)
+ +.++.+.+++++++ ++|+|||++|+ ..+..+++.++++ |+++.+|...+...++++...++ +++.++|.....
T Consensus 195 ~--~~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 270 (326)
T COG0604 195 R--EEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGS 270 (326)
T ss_pred C--cccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEeccee
Confidence 7 66799999999988 99999999998 6778899999997 99999999773234344444333 477777777654
Q ss_pred C--C-CCCcHHHHHHHHHcCCCCCC
Q 018627 324 W--K-PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 324 ~--~-~~~~~~~~~~~l~~g~i~~~ 345 (353)
. . ..+.+.++.+++++|++++.
T Consensus 271 ~~~~~~~~~~~~l~~~~~~g~l~~~ 295 (326)
T COG0604 271 RDPEALAEALAELFDLLASGKLKPV 295 (326)
T ss_pred cchHHHHHHHHHHHHHHHcCCCcce
Confidence 3 1 12456789999999999764
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=7.7e-46 Score=356.42 Aligned_cols=316 Identities=24% Similarity=0.356 Sum_probs=250.4
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCC-------CCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQ-------PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~-------~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~ 82 (353)
-|||+++.++++ ++++++|.|+|+ +|||||||.++|||++|++.+.|.. .+|.++|||++|+|+++|+++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCCCCCccccceeEEEEEEEcCcc
Confidence 489999998887 999999999984 6899999999999999999998764 568999999999999999999
Q ss_pred CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccc----cccccCCccccccccCCccccccCccceeeeEEEeCC-
Q 018627 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (353)
Q Consensus 83 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~- 157 (353)
++|++||||++.+...|+.|.+|+.|+++.|.+..... .|.. ..+ ...|+|+||+++|+.
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~-~~~--------------~~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYV-DMG--------------GWVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccc-ccC--------------CCCCceEEEEEechhh
Confidence 99999999999999999999999999999998743210 1110 000 012699999999964
Q ss_pred -ceEECCCCCCh----hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHH
Q 018627 158 -CAVKVSSIAPL----EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (353)
Q Consensus 158 -~v~~iP~~l~~----~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~ 232 (353)
.++++|++++. .+++.+.+++.++|+++ +..++++|++|||.|+|++|++++|+|+++|++.|++++++++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998753 35677777999999987 4578999999999888999999999999999966777788899999
Q ss_pred HHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCCh--------------HHHHHHHHHhccCCceEEEEcCC
Q 018627 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT--------------GMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 233 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
.++++|++. +++.. +.++.+.+.+++++ ++|++||++|.+ ..++.+++.++++ |+++.+|..
T Consensus 225 ~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~ 301 (393)
T TIGR02819 225 QARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLY 301 (393)
T ss_pred HHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeec
Confidence 999999974 44321 34566777777766 899999999975 3799999999997 999999986
Q ss_pred CC-CC-c---------eecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627 298 KL-KP-E---------VAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 298 ~~-~~-~---------~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~ 350 (353)
.. .. . +++.... +.+++++.+... ...+.+.++++++++|++++++++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~~g~i~~~~~i~~ 363 (393)
T TIGR02819 302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRNLMQAILHDRVQIAKAVNV 363 (393)
T ss_pred CCcccccccccccccccccchHHhhccCceEEeccC---ChhhhHHHHHHHHHcCCCCHHHceec
Confidence 32 11 1 1111211 134566665321 11233478999999999999888874
No 19
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=6.6e-45 Score=345.20 Aligned_cols=311 Identities=24% Similarity=0.340 Sum_probs=259.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhc-cC-CCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWE-TQ-AIFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~-g~-~~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++.++++ ++++++|.|.| +++||+|||.++++|++|++.+. +. ..+|.++|||++|+|+++|+++++|++||
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd 79 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGD 79 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 78999998876 99999999998 59999999999999999987532 21 25789999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
||++.+...|+.|.+|+.|+++.|..... .|.. . .|+|+||+.++++.++++|++++++
T Consensus 80 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-~------------------~G~~aey~~v~~~~~~~lP~~~s~~ 138 (347)
T PRK10309 80 AVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSR-R------------------DGGNAEYIVVKRKNLFALPTDMPIE 138 (347)
T ss_pred EEEECCCcCCCCCcchhCcCcccCCCcce--eccC-C------------------CCccceeEEeehHHeEECcCCCCHH
Confidence 99999999999999999999999976543 2211 1 2599999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~ 249 (353)
+++.+. +++++++++ +...+++|++|||+|+|++|++++|+|+++|++.|+++++++++++.++++|++.+++++ +
T Consensus 139 ~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~--~ 214 (347)
T PRK10309 139 DGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSR--E 214 (347)
T ss_pred Hhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCc--c
Confidence 998875 667788875 667889999999999899999999999999996689999999999999999999998876 3
Q ss_pred ccHHHHHHHHhcC-Ccc-EEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecc-h-hhhhcCcEEEeeecCCCC
Q 018627 250 EPVQQVIKRITDG-GAD-YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLFLSGRTLKGSLFGGWK 325 (353)
Q Consensus 250 ~~~~~~~~~~~~~-~~d-vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~ 325 (353)
.+ .+.+.+.+.+ ++| ++|||+|.+..+..++++++++ |+++.+|.......++.. . ..+.+++++.|++.+...
T Consensus 215 ~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 292 (347)
T PRK10309 215 MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSS 292 (347)
T ss_pred cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccC
Confidence 33 4456666655 888 9999999877899999999997 999999986543223221 1 223569999998765322
Q ss_pred --CCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627 326 --PKTDLPSLVNRYLKKVRNTRKPSCGN 351 (353)
Q Consensus 326 --~~~~~~~~~~~l~~g~i~~~~li~~~ 351 (353)
.++++.++++++++|+++++++|++.
T Consensus 293 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~ 320 (347)
T PRK10309 293 PWPGQEWETASRLLTERKLSLEPLIAHR 320 (347)
T ss_pred CcchhHHHHHHHHHHcCCCCchhheEEE
Confidence 24679999999999999998888763
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=4.7e-45 Score=347.79 Aligned_cols=318 Identities=22% Similarity=0.324 Sum_probs=256.9
Q ss_pred CCccccCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEE
Q 018627 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVES 77 (353)
Q Consensus 1 m~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~ 77 (353)
|..+....-|+++.++++++..+.+++.+++.|+|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence 4555555677889999988887779999999999999999999999999999999887754 4689999999999999
Q ss_pred eCCCCCCCCCCCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeC
Q 018627 78 VGPGVTEFNEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (353)
Q Consensus 78 vG~~~~~~~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 156 (353)
+|+++++|++||||++.+. ..|+.|.+|+.|.++.|++..+...... .+| ....|+|+||+++|+
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~ 146 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIG-HDG-------------TKNYGGYSDMIVVDQ 146 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccc-cCC-------------CcCCCccceEEEEch
Confidence 9999999999999986543 5799999999999999987653221100 011 001259999999999
Q ss_pred CceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh-HHHHH
Q 018627 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAK 235 (353)
Q Consensus 157 ~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~-~~~~~ 235 (353)
+.++++|+++++++++.+++.+.|+|+++.+...+++|++|||.|+|++|++++|+|+++|+ +|++++.++++ .+.++
T Consensus 147 ~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~ 225 (360)
T PLN02586 147 HFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAIN 225 (360)
T ss_pred HHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHH
Confidence 99999999999999999999999999998666667899999999999999999999999999 77777666555 55668
Q ss_pred hCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCc
Q 018627 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGR 314 (353)
Q Consensus 236 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 314 (353)
++|++.++++.+ . +.+++..+ ++|++||++|.+..+..++++++++ |+++.+|.......+ +...+ .+++
T Consensus 226 ~~Ga~~vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~--~~~~~~~~~~ 296 (360)
T PLN02586 226 RLGADSFLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKPLEL--PIFPLVLGRK 296 (360)
T ss_pred hCCCcEEEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCCCcc--CHHHHHhCCe
Confidence 899998887652 1 23444443 6999999999877889999999997 999999976443333 33333 4577
Q ss_pred EEEeeecCCCCCCCcHHHHHHHHHcCCCCCC
Q 018627 315 TLKGSLFGGWKPKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 315 ~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~ 345 (353)
.+.|+..+. ..+++++++++++|+|++.
T Consensus 297 ~i~g~~~~~---~~~~~~~~~li~~g~i~~~ 324 (360)
T PLN02586 297 LVGGSDIGG---IKETQEMLDFCAKHNITAD 324 (360)
T ss_pred EEEEcCcCC---HHHHHHHHHHHHhCCCCCc
Confidence 777776543 3579999999999999863
No 21
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=4.4e-44 Score=342.73 Aligned_cols=340 Identities=48% Similarity=0.837 Sum_probs=277.1
Q ss_pred ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCC
Q 018627 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 9 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
...+|||+++..++++++++++|.|++.++||+|||.++++|++|++.+.|.. .+|+++|||++|+|+++|+++..++
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCCCCCccccccceEEEEEeCCCCccCC
Confidence 34579999999988889999999999999999999999999999999987764 5688999999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
+||+|++.+..+|++|.+|+.++++.|+...... .|.. .++.-+...+|.+..+....|+|+||++++++.++++|++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 9999999988899999999999999998764321 1222 1111111122322222223479999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+++++++.+.+++.+||+++.+..++++|++|||+|+|++|++++++|+++|+.+|+++++++++++.++++|+++++++
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 99999999999999999998788899999999999889999999999999998679999999999999999999988887
Q ss_pred CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHh-ccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC-CDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (353)
.+...++.+.+.+++++++|+++||+|.+..+..++..+ +++ |+++.+|.......+++.+..+.++.++.++..+.+
T Consensus 243 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 321 (373)
T cd08299 243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGW 321 (373)
T ss_pred cccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCC
Confidence 532234666677666568999999999767777777765 565 999999976543345555544556889999888777
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627 325 KPKTDLPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 325 ~~~~~~~~~~~~l~~g~i~~~~li~~ 350 (353)
..++++.++++++.++.+++++++.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (373)
T cd08299 322 KSKDSVPKLVADYMAKKFNLDPLITH 347 (373)
T ss_pred ccHHHHHHHHHHHHcCCCCchhheee
Confidence 65678888999888888877766543
No 22
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.3e-44 Score=341.78 Aligned_cols=304 Identities=26% Similarity=0.395 Sum_probs=257.8
Q ss_pred EEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC-C---CCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627 16 AVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-A---IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (353)
Q Consensus 16 ~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~-~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V 91 (353)
+++.+++++++++++|.|+|+++||+|||.++++|++|++.+.+. . .+|.++|||++|+|+++|+++..+ +||||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 567788877999999999999999999999999999999876332 2 568999999999999999999887 99999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC------C
Q 018627 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS------I 165 (353)
Q Consensus 92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~------~ 165 (353)
++.+...|++|..|+.|+++.|..... .|.. . .|+|+||+.+|++.++++|+ +
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~-~------------------~G~~ae~~~v~~~~~~~ip~~~~~~~~ 139 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM--PGND-M------------------QGGFASHIVVPAKGLCVVDEARLAAAG 139 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc--cCcC-C------------------CCcccceEEechHHeEECCcccccccC
Confidence 999999999999999999999976543 2211 1 25999999999999999999 8
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+++++++.+.+++.++|+++. ...+++|++|||+|+|++|++++|+|+++|+ +|+++++++++++.++++|++.++++
T Consensus 140 ~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~ 217 (349)
T TIGR03201 140 LPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNP 217 (349)
T ss_pred CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecC
Confidence 999999999999999999984 5789999999999999999999999999999 89999999999999999999998887
Q ss_pred CCCC-ccHHHHHHHHhcC-Ccc----EEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEe
Q 018627 246 NDNN-EPVQQVIKRITDG-GAD----YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKG 318 (353)
Q Consensus 246 ~~~~-~~~~~~~~~~~~~-~~d----vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 318 (353)
.+.+ .++.+.+++.+++ ++| ++|||+|+...+..++++++++ |+++.+|.......+ ....+ .+++++.|
T Consensus 218 ~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~--~~~~~~~~~~~~~g 294 (349)
T TIGR03201 218 KDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEY--RLSNLMAFHARALG 294 (349)
T ss_pred ccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCccc--CHHHHhhcccEEEE
Confidence 5321 3566777777776 776 8999999877888899999997 999999987543333 33333 34788888
Q ss_pred eecCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627 319 SLFGGWKPKTDLPSLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~ 349 (353)
++... .++++++++++++|+|++.++++
T Consensus 295 ~~~~~---~~~~~~~~~~i~~g~i~~~~~i~ 322 (349)
T TIGR03201 295 NWGCP---PDRYPAALDLVLDGKIQLGPFVE 322 (349)
T ss_pred EecCC---HHHHHHHHHHHHcCCCCcccceE
Confidence 76433 46899999999999999887764
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.3e-44 Score=342.58 Aligned_cols=306 Identities=22% Similarity=0.297 Sum_probs=243.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++..++.+++++++|.|+|+++||||||++++||++|++.+.|.+ .+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 6899988655459999999999999999999999999999999988754 24689999999999999999 8999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||||+..+...|+.|.+|+.|+++.|........|.... .|+|+||+.++++.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~------------------~G~~aey~~~~~~~~~~~P~~~ 141 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGL------------------HGFMREYFVDDPEYLVKVPPSL 141 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCC------------------CccceeEEEeccccEEECCCCC
Confidence 9999999988899999999999999998765432332101 2599999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHh------ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC---ChhhHHHHHhC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNV------ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT---NPEKCEKAKAF 237 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~------~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~---~~~~~~~~~~~ 237 (353)
+ + ++.+..+++++++++... ...++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|++.++++
T Consensus 142 ~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~ 218 (355)
T cd08230 142 A-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEEL 218 (355)
T ss_pred C-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHc
Confidence 8 4 444445777766554321 235689999999999999999999999999 8999887 68899999999
Q ss_pred CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecc-----hhhhhc
Q 018627 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-----YGLFLS 312 (353)
Q Consensus 238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-----~~~~~~ 312 (353)
|++. +++. +.++.+ .+ ..+++|+||||+|.+..+..+++.++++ |+++.+|.......+++. ...+++
T Consensus 219 Ga~~-v~~~--~~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k 291 (355)
T cd08230 219 GATY-VNSS--KTPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLG 291 (355)
T ss_pred CCEE-ecCC--ccchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhc
Confidence 9986 4554 333433 22 2348999999999877889999999997 999999987652333333 122357
Q ss_pred CcEEEeeecCCCCCCCcHHHHHHHHHcCCC----CCCCCccC
Q 018627 313 GRTLKGSLFGGWKPKTDLPSLVNRYLKKVR----NTRKPSCG 350 (353)
Q Consensus 313 ~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i----~~~~li~~ 350 (353)
++++.|++.+. ++++.++++++.++++ .+++++++
T Consensus 292 ~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~ 330 (355)
T cd08230 292 NKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITR 330 (355)
T ss_pred CcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheee
Confidence 99999986543 4689999999998873 24555553
No 24
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6.5e-43 Score=333.81 Aligned_cols=334 Identities=47% Similarity=0.828 Sum_probs=282.6
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (353)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V 91 (353)
||+++...++++++++.|.|++++++|+||+.++++|++|++.+.+.. .+|.++|||++|+|+++|++++.+++||+|
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~V 81 (365)
T cd05279 2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDKV 81 (365)
T ss_pred ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCEE
Confidence 688999888779999999999999999999999999999999887765 567899999999999999999999999999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627 92 LTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (353)
Q Consensus 92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~ 170 (353)
++.+...|+.|.+|+.+++++|......+ .|.. .+|+..+..+|.+.++..+.|+|++|++++++.++++|+++++++
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~ 160 (365)
T cd05279 82 IPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEK 160 (365)
T ss_pred EEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHH
Confidence 99988899999999999999998865432 2322 445555555555555555567999999999999999999999999
Q ss_pred hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
++.+.+++.+||+++.+..++.+|++|||+|+|++|++++++|+++|+..|+++++++++.+.++++|+++++++.+.+.
T Consensus 161 a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 240 (365)
T cd05279 161 VCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDK 240 (365)
T ss_pred hhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccc
Confidence 99999999999999888889999999999988999999999999999966888888999999999999998888763222
Q ss_pred cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhc-cCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCc
Q 018627 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCC-DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD 329 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 329 (353)
++.+.+++.+++++|+++|++|.+..+..++++++ ++ |+++.+|.........++...+.++.++.|++.+.+...++
T Consensus 241 ~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 319 (365)
T cd05279 241 PIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKDS 319 (365)
T ss_pred hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHhH
Confidence 67777777765699999999987678899999999 96 99999987642233444554445688899988777766788
Q ss_pred HHHHHHHHHcCCCCCCCCcc
Q 018627 330 LPSLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 330 ~~~~~~~l~~g~i~~~~li~ 349 (353)
+.+++++++++++++.+++.
T Consensus 320 ~~~~~~l~~~~~l~~~~~~~ 339 (365)
T cd05279 320 VPKLVALYRQKKFPLDELIT 339 (365)
T ss_pred HHHHHHHHHcCCcchhHhee
Confidence 99999999999998765554
No 25
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=4.7e-43 Score=332.95 Aligned_cols=307 Identities=30% Similarity=0.467 Sum_probs=262.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--------------CCCcccccceeEEEEEe
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--------------IFPRIFGHEASGIVESV 78 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--------------~~p~~~G~e~~G~V~~v 78 (353)
|||+++.++++ ++++++|.|+|+++||+||+.++++|++|++.+.+.. .+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999998876 9999999999999999999999999999987654321 26889999999999999
Q ss_pred CCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCc
Q 018627 79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158 (353)
Q Consensus 79 G~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~ 158 (353)
|++++++++||+|++.+...|++|.+|+.|..+.|.+... .|.. . ..|+|+||+.++.+.
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-----------------~~g~~a~~~~~~~~~ 139 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLG-G-----------------GGGGFAEYVVVPAYH 139 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccC-C-----------------CCCceeeEEEechHH
Confidence 9999999999999999999999999999999999986542 1111 0 025999999999999
Q ss_pred eEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627 159 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (353)
Q Consensus 159 v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 238 (353)
++++|+++++++++.+ .++.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|
T Consensus 140 ~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~g 217 (351)
T cd08233 140 VHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELG 217 (351)
T ss_pred eEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence 9999999999999877 5888999998 7788999999999998999999999999999978999999999999999999
Q ss_pred CceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEE
Q 018627 239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTL 316 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i 316 (353)
++.+++++ ..++.+.+++.+++ ++|++||++|.+..+..++++++++ |+++.+|...... ++.... +.+++++
T Consensus 218 a~~~i~~~--~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i 292 (351)
T cd08233 218 ATIVLDPT--EVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKPI--SFNPNDLVLKEKTL 292 (351)
T ss_pred CCEEECCC--ccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCCC--ccCHHHHHhhCcEE
Confidence 99999886 46688888887776 7999999999777889999999997 9999999865333 333333 3568999
Q ss_pred EeeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627 317 KGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~ 350 (353)
.+++... .++++++++++++|+|++.++++.
T Consensus 293 ~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~ 323 (351)
T cd08233 293 TGSICYT---REDFEEVIDLLASGKIDAEPLITS 323 (351)
T ss_pred EEEeccC---cchHHHHHHHHHcCCCChHHheEE
Confidence 9886443 478999999999999988776653
No 26
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.7e-43 Score=336.07 Aligned_cols=304 Identities=21% Similarity=0.307 Sum_probs=245.5
Q ss_pred EEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (353)
Q Consensus 15 a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V 91 (353)
+++..+..+.+++.+++.|+|+++||+|||.+++||++|++.+.|.+ .+|.++|||++|+|+++|+++++|++||||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 55555655569999999999999999999999999999999988754 458999999999999999999999999999
Q ss_pred Eeeccc-CCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627 92 LTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (353)
Q Consensus 92 ~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~ 170 (353)
+..+.. .|+.|.+|++|+++.|++......+.. ..| ....|+|+||+.+|++.++++|+++++++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~~ 154 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRS-SDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSDS 154 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccc-cCC-------------CcCCCccccEEEEchHHeEECCCCCCHHH
Confidence 866554 699999999999999998643211100 001 00125999999999999999999999999
Q ss_pred hhhhchhhhHHHHHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-hHHHHHhCCCceEeCCCCC
Q 018627 171 ICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 171 aa~l~~~~~ta~~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~G~~~~~~~~~~ 248 (353)
++.+.+.+.|+|+++..... .++|++|||.|+|++|++++|+|+++|+ +|++++.+++ +.+.++++|+++++++.+
T Consensus 155 aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~- 232 (375)
T PLN02178 155 GAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD- 232 (375)
T ss_pred cchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC-
Confidence 99999999999998754432 3689999999999999999999999999 7888876654 477888999999887652
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (353)
. +.+++.++ ++|++|||+|.+..+..++++++++ |+++.+|.......+ +...+ ++++++.|++.+. .
T Consensus 233 -~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~--~~~~~~~~~~~i~g~~~~~---~ 301 (375)
T PLN02178 233 -S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKPLDL--PIFPLVLGRKMVGGSQIGG---M 301 (375)
T ss_pred -H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCCCcc--CHHHHHhCCeEEEEeCccC---H
Confidence 1 34444443 6999999999876789999999997 999999976443233 33333 5689999887654 3
Q ss_pred CcHHHHHHHHHcCCCCCC
Q 018627 328 TDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~~ 345 (353)
+++.++++++++|++++.
T Consensus 302 ~~~~~~~~l~~~g~i~~~ 319 (375)
T PLN02178 302 KETQEMLEFCAKHKIVSD 319 (375)
T ss_pred HHHHHHHHHHHhCCCccc
Confidence 679999999999999763
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.8e-42 Score=324.89 Aligned_cols=291 Identities=22% Similarity=0.303 Sum_probs=243.6
Q ss_pred EEEEecCC----CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627 15 AAVAWGAG----QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (353)
Q Consensus 15 a~~~~~~~----~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v 87 (353)
|+++.+++ ..++++++|.|+|+++||+|||.++++|++|++.+.|.+ .+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 35555555 348999999999999999999999999999999988864 34789999999999999999999999
Q ss_pred CCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 88 GEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 88 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
||||+..+. ..|+.|.+|+.|.++.|+.... .|.. . .|+|+||+.+|+..++++|+++
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-~------------------~G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWD-T------------------DGGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCccc--CCcc-c------------------CCcceeEEEeccccEEECCCCC
Confidence 999987654 4799999999999999987553 2222 1 2599999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
++++++.+++.+.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++++|+++++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999998 45789999999999999999999999999999 799999999999999999999988753
Q ss_pred CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC
Q 018627 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK 325 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 325 (353)
+ .. .+++|+++++.+....+..+++.++++ |+++.+|..... ..++.... +++++++.+++...
T Consensus 218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~-- 282 (329)
T TIGR02822 218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSNT-- 282 (329)
T ss_pred c--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecCC--
Confidence 1 10 136899999888778899999999997 999999975332 12233333 35688898876433
Q ss_pred CCCcHHHHHHHHHcCCCCC
Q 018627 326 PKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~ 344 (353)
++++.++++++++|++++
T Consensus 283 -~~~~~~~~~l~~~g~i~~ 300 (329)
T TIGR02822 283 -RADAREFLELAAQHGVRV 300 (329)
T ss_pred -HHHHHHHHHHHHhCCCee
Confidence 467899999999999863
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.3e-41 Score=324.29 Aligned_cols=318 Identities=25% Similarity=0.360 Sum_probs=263.2
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC------
Q 018627 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE------ 84 (353)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~------ 84 (353)
||+++.++++.++++++|.|+|+++||+|||.++++|++|+..+.|.. .+|.++|||++|+|+++|+++.+
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 789999988779999999999999999999999999999998887754 46789999999999999999976
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC-ceEECC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVS 163 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-~v~~iP 163 (353)
|++||+|++.+...|+.|.+|+.+..+.|.+..+...+.+ ++. ....|+|+||++++++ .++++|
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~--~~~------------~~~~g~~a~~~~v~~~~~~~~lP 147 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEAS--CDD------------PHLSGGYAEHIYLPPGTAIVRVP 147 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhcccccc--ccC------------CCCCcccceEEEecCCCceEECC
Confidence 9999999999999999999999999999988754221111 000 0013699999999986 799999
Q ss_pred CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (353)
Q Consensus 164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~ 243 (353)
+++++++++.+++++.|||+++.+....++|++|||+|+|++|++++++|+++|+++|+++++++++.+.++++|++.++
T Consensus 148 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi 227 (361)
T cd08231 148 DNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI 227 (361)
T ss_pred CCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence 99999999999889999999997666667999999998899999999999999997899999999999999999999888
Q ss_pred CCCCCC-ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeee
Q 018627 244 NPNDNN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL 320 (353)
Q Consensus 244 ~~~~~~-~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 320 (353)
++.... .++...+++.+++ ++|++|||+|+...+..+++.++++ |+++.+|........++.... +.+++++.+++
T Consensus 228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (361)
T cd08231 228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH 306 (361)
T ss_pred cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcc
Confidence 775311 1233567777766 8999999998867789999999997 999999976543333444433 34689998886
Q ss_pred cCCCCCCCcHHHHHHHHHcC--CCCCCCCcc
Q 018627 321 FGGWKPKTDLPSLVNRYLKK--VRNTRKPSC 349 (353)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~g--~i~~~~li~ 349 (353)
.+. .+++.++++++.++ ++++.++++
T Consensus 307 ~~~---~~~~~~~~~~~~~~~~~~~~~~~i~ 334 (361)
T cd08231 307 NYD---PSHLYRAVRFLERTQDRFPFAELVT 334 (361)
T ss_pred cCC---chhHHHHHHHHHhccCcCCchhhee
Confidence 543 46899999999998 666666665
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=8.2e-42 Score=325.25 Aligned_cols=306 Identities=22% Similarity=0.296 Sum_probs=249.8
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
.++|+++++++.++++++++.|+|+++||+|||.++++|++|++.+.|.. .+|.++|||++|+|+++|+++++|++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~G 88 (357)
T PLN02514 9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG 88 (357)
T ss_pred eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCC
Confidence 58999999999999999999999999999999999999999999887754 468899999999999999999999999
Q ss_pred CeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 89 EHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 89 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
|+|+..+. ..|++|..|+.|.++.|....+...+.. ..| ....|+|+||+.+|...++++|++++
T Consensus 89 d~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~~ 154 (357)
T PLN02514 89 DIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG-------------KPTQGGFASAMVVDQKFVVKIPEGMA 154 (357)
T ss_pred CEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC-------------ccCCCccccEEEEchHHeEECCCCCC
Confidence 99986543 4799999999999999987643211100 001 00126999999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHH-HHhCCCceEeCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEFLNPN 246 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~G~~~~~~~~ 246 (353)
+++++.+++.+.|||+++.+....++|+++||+|+|++|++++|+|+++|+ +++++.+++++.+. ++++|++.+++..
T Consensus 155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~ 233 (357)
T PLN02514 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSS 233 (357)
T ss_pred HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence 999999999999999998665566899999999889999999999999999 77777777766654 4679998877654
Q ss_pred CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC
Q 018627 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK 325 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 325 (353)
+. +.+.+.+ .++|++|||+|....+..++++++++ |+++.+|...... ++.... +++++++.|++.+.
T Consensus 234 --~~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 234 --DA---AEMQEAA-DSLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTPL--QFVTPMLMLGRKVITGSFIGS-- 302 (357)
T ss_pred --Ch---HHHHHhc-CCCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCCC--cccHHHHhhCCcEEEEEecCC--
Confidence 21 2344433 36999999999767889999999997 9999999875432 333332 35699999987654
Q ss_pred CCCcHHHHHHHHHcCCCCC
Q 018627 326 PKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~ 344 (353)
..+++++++++++|++++
T Consensus 303 -~~~~~~~~~~~~~g~l~~ 320 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLTS 320 (357)
T ss_pred -HHHHHHHHHHHHhCCCcC
Confidence 357999999999998753
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.2e-41 Score=324.98 Aligned_cols=331 Identities=34% Similarity=0.617 Sum_probs=267.1
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
++|||+++.+++.++++++.+.|+++++||+|||.++++|++|++.+.+.+ .+|.++|||++|+|+++|+++.++++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPG 80 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCC
Confidence 479999999877779999999999999999999999999999999887754 567899999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCcccccccc-CCccc-cccCccceeeeEEEeCCceEECCCC
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIK-GKPVY-HYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~-~~~~~-~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
|+|++.+. .|+.|..|+.++.++|.+..... .|.. .+|......+ |.+.. +....|+|++|++++++.++++|++
T Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 81 DHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99999765 89999999999999998765321 1111 1110000000 00000 0012369999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+++++++.+++++.+|+.++.+...++++++|||+|+|++|++++|+|+++|++.++++++++++.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999998888889999999999889999999999999999779999999999999999999988887
Q ss_pred CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCC
Q 018627 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGW 324 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 324 (353)
. ..++.+.+.+.++.++|+++||+|.+..+..+++.++++ |+++.+|.........++...+ .+++++.++.....
T Consensus 239 ~--~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (365)
T cd08278 239 K--EEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS 315 (365)
T ss_pred C--CcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence 6 456777777777449999999999777889999999997 9999999763222334444444 56888887765444
Q ss_pred CCCCcHHHHHHHHHcCCCCCCC
Q 018627 325 KPKTDLPSLVNRYLKKVRNTRK 346 (353)
Q Consensus 325 ~~~~~~~~~~~~l~~g~i~~~~ 346 (353)
...+.+.++++++++|++++.+
T Consensus 316 ~~~~~~~~~~~~l~~g~l~~~~ 337 (365)
T cd08278 316 VPQEFIPRLIELYRQGKFPFDK 337 (365)
T ss_pred ChHHHHHHHHHHHHcCCCChHH
Confidence 3345678999999999986533
No 31
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.5e-42 Score=326.79 Aligned_cols=292 Identities=18% Similarity=0.187 Sum_probs=232.2
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-------CCCcccccceeEEEEEeCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------IFPRIFGHEASGIVESVGPGVTE 84 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-------~~p~~~G~e~~G~V~~vG~~~~~ 84 (353)
..++++++++++ ++++++|.|+ +++||||||+++|||++|++.+.|.+ .+|.++|||++|+|+++|.+ +
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 467899999987 9999999995 99999999999999999999998863 35899999999999998764 6
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~ 164 (353)
|++||||++.+...|. |..| +..+.|.+..+. |.. . .|+|+||+.+|++.++++|+
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~vP~ 133 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR--SSG-Y------------------DGFMQDYVFLPPDRLVKLPD 133 (341)
T ss_pred cCCCCEEEECCCCCch-hccc--chhccCCCccee--Eec-C------------------CCceEEEEEEchHHeEECCC
Confidence 9999999998877776 4455 356778765432 111 1 25999999999999999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHH--hccCCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHhCCCce
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTE 241 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~--~~~~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~G~~~ 241 (353)
++++++|+.+. +++++++++.. ...+++|++|||+|+|++|++++|++++ +|..+|++++++++|++.+++++++.
T Consensus 134 ~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~ 212 (341)
T cd08237 134 NVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETY 212 (341)
T ss_pred CCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCcee
Confidence 99999887665 88999998754 2456889999999999999999999986 56558999999999999998866543
Q ss_pred EeCCCCCCccHHHHHHHHhcC-CccEEEeccCC---hHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEE
Q 018627 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGD---TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTL 316 (353)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i 316 (353)
.++ ++ ..+ ++|+|||++|+ +..+..++++++++ |+++++|...... ++.... +.+++++
T Consensus 213 ~~~------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~k~~~i 276 (341)
T cd08237 213 LID------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYPV--PINTRMVLEKGLTL 276 (341)
T ss_pred ehh------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCCc--ccCHHHHhhCceEE
Confidence 221 11 122 69999999994 46789999999997 9999999764432 333333 3579999
Q ss_pred EeeecCCCCCCCcHHHHHHHHHcC---CCCCCCCccCC
Q 018627 317 KGSLFGGWKPKTDLPSLVNRYLKK---VRNTRKPSCGN 351 (353)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~l~~g---~i~~~~li~~~ 351 (353)
.|+..+. .++++++++++.+| +.+++++|++.
T Consensus 277 ~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 311 (341)
T cd08237 277 VGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGV 311 (341)
T ss_pred EEecccC---HHHHHHHHHHHHhCCcccCChHHHhccc
Confidence 9886432 46799999999999 44677787764
No 32
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.3e-42 Score=294.31 Aligned_cols=285 Identities=25% Similarity=0.275 Sum_probs=248.1
Q ss_pred CCccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCC
Q 018627 7 QPQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPG 81 (353)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~ 81 (353)
...|...+.+++++.|.. +++++.|.|+|.|+|++||..++|+|..|...+.|.+ +.|+++|-|++|+|+++|.+
T Consensus 3 ~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~g 82 (336)
T KOG1197|consen 3 AASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEG 82 (336)
T ss_pred CCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCC
Confidence 456778899999988766 9999999999999999999999999999999999988 67899999999999999999
Q ss_pred CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (353)
Q Consensus 82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~ 161 (353)
++++++||||+... .+|.|+|+..+|...+++
T Consensus 83 vtdrkvGDrVayl~------------------------------------------------~~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 83 VTDRKVGDRVAYLN------------------------------------------------PFGAYAEEVTVPSVKVFK 114 (336)
T ss_pred ccccccccEEEEec------------------------------------------------cchhhheeccccceeecc
Confidence 99999999998762 246999999999999999
Q ss_pred CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc
Q 018627 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240 (353)
Q Consensus 162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~ 240 (353)
+|+.+++.+||++...+.|||.-+++..++++|++||||.+ |++|++++|++++.|+ ++|++.+..+|.+.+++.|++
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999975 9999999999999999 999999999999999999999
Q ss_pred eEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEE-E
Q 018627 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTL-K 317 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i-~ 317 (353)
+.++++ .+++.+.+++.+++ |+|+++|.+|. +.+...+.+|++. |.+|.+|+..+..+ +++...+ -+++++ +
T Consensus 194 h~I~y~--~eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~-p~~l~~ls~k~l~lvr 268 (336)
T KOG1197|consen 194 HPIDYS--TEDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLID-PIPLNQLSPKALQLVR 268 (336)
T ss_pred ceeecc--chhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCC-CeehhhcChhhhhhcc
Confidence 999998 78999999999988 99999999998 7789999999997 99999998766321 2222222 235553 4
Q ss_pred eeecCCCCCCCcHH----HHHHHHHcCCCCCC
Q 018627 318 GSLFGGWKPKTDLP----SLVNRYLKKVRNTR 345 (353)
Q Consensus 318 g~~~~~~~~~~~~~----~~~~~l~~g~i~~~ 345 (353)
.+.++....+++|. ++..++.+|+|+++
T Consensus 269 psl~gYi~g~~el~~~v~rl~alvnsg~lk~~ 300 (336)
T KOG1197|consen 269 PSLLGYIDGEVELVSYVARLFALVNSGHLKIH 300 (336)
T ss_pred HhhhcccCCHHHHHHHHHHHHHHhhcCcccee
Confidence 45555544444444 78888889988754
No 33
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.3e-40 Score=317.76 Aligned_cols=332 Identities=38% Similarity=0.681 Sum_probs=270.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~ 90 (353)
|||+++.+++.+++++++|.|+++++||+||+.++++|++|+..+.+.. .+|.++|+|++|+|+++|+++..+++||+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDH 80 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCCCCCccccccceEEEEEeCCCccccCCCCE
Confidence 7899999998889999999999999999999999999999999887754 56779999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (353)
Q Consensus 91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~ 170 (353)
|++.+...|++|++|++++.+.|++..+.-.|.. .++..++-..|...+.....|+|++|+.++++.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 81 VVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEECCCCCCCCChhhcCCCcccCccccccccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 9999999999999999999999987643211111 010000000111222222347999999999999999999999999
Q ss_pred hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
++.+++.+.+||.++.+..++.++++|||+|+|.+|++++++|++.|+.+|+++.+++++.+.++++|++++++.+ ..
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~--~~ 237 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS--ED 237 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC--Cc
Confidence 9999999999999988888899999999997799999999999999995599999999999999999998888876 45
Q ss_pred cHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCCCC
Q 018627 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKPKT 328 (353)
Q Consensus 251 ~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~ 328 (353)
++...++.+..+ ++|+++|++++...+...+++++++ |+++.+|.........+....+. ++..+.++.++.....+
T Consensus 238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (363)
T cd08279 238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRR 316 (363)
T ss_pred cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHH
Confidence 677778777655 8999999999767889999999997 99999987653233334444443 57777887665544567
Q ss_pred cHHHHHHHHHcCCCCCCCCc
Q 018627 329 DLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 329 ~~~~~~~~l~~g~i~~~~li 348 (353)
.+++++++++++++++.+++
T Consensus 317 ~~~~~~~l~~~g~l~~~~~~ 336 (363)
T cd08279 317 DIPRLLDLYRAGRLKLDELV 336 (363)
T ss_pred HHHHHHHHHHcCCCCcceeE
Confidence 89999999999999876543
No 34
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-40 Score=316.50 Aligned_cols=312 Identities=25% Similarity=0.332 Sum_probs=259.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++.+++. +++++.|.|.+.++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+++.++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 78999999886 8999999999999999999999999999998876654 5578999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~ 167 (353)
+|++.+..+|+.|..|..|+++.|.+.. .|+. . + ....|+|+||+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~---~~~~-~-~-------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~ 141 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGML---GGWK-F-S-------------NFKDGVFAEYFHVNDADANLAPLPDGLT 141 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCC---CCcc-c-c-------------CCCCcceeEEEEcchhhCceEECCCCCC
Confidence 9999888899999999999999998742 1111 0 0 0012599999999974 8999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~ 247 (353)
+++++.++..+.||++++ +...+++|++|||+|+|++|++++|+|+++|+..++++++++++.+.++++|++.++++.
T Consensus 142 ~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~- 219 (351)
T cd08285 142 DEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK- 219 (351)
T ss_pred HHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC-
Confidence 999999988999999996 678899999999998899999999999999997799999999999999999999998876
Q ss_pred CCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh---hcCcEEEeeecCC
Q 018627 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---LSGRTLKGSLFGG 323 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~~ 323 (353)
..++.+.+..+..+ ++|++|||+|++..+..++++++++ |+++.+|.......+.+....+ ++...+.+.....
T Consensus 220 -~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 297 (351)
T cd08285 220 -NGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG 297 (351)
T ss_pred -CCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecCC
Confidence 45677777777665 8999999999877889999999997 9999999766433333332111 3355665543221
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627 324 WKPKTDLPSLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 324 ~~~~~~~~~~~~~l~~g~i~~~~li~ 349 (353)
.+++++++++++++|+|++.++++
T Consensus 298 --~~~~~~~~~~~~~~g~i~~~~~~~ 321 (351)
T cd08285 298 --GRLRMERLASLIEYGRVDPSKLLT 321 (351)
T ss_pred --ccccHHHHHHHHHcCCCChhhcee
Confidence 247899999999999999855543
No 35
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=5.2e-40 Score=309.95 Aligned_cols=299 Identities=23% Similarity=0.381 Sum_probs=254.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++.+++++++++++|.|+++++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++.++++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 7899999996679999999999999999999999999999999887753 5677999999999999999999999999
Q ss_pred eEEeec-ccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627 90 HVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (353)
Q Consensus 90 ~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~ 168 (353)
+|++.+ ...|+.|.+|..|+++.|..... .|.. . .|+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~--~~~~-~------------------~g~~a~~~~v~~~~~~~lp~~~~~ 139 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVT-R------------------DGGYAEYMLAPAEALARIPDDLDA 139 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc--cCcc-c------------------CCcceeEEEEchhheEeCCCCCCH
Confidence 998855 45799999999999999987543 2221 1 258999999999999999999999
Q ss_pred hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
++++.+++.+.++|+++.. ..+.++++|||+|+|++|++++++|+++|+ +|+++++++++.+.++++|+++++++.
T Consensus 140 ~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~-- 215 (333)
T cd08296 140 AEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTS-- 215 (333)
T ss_pred HHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCC--
Confidence 9999999999999999854 589999999999999999999999999999 899999999999999999999888876
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (353)
..++.+.+++. +++|+++|++|.+..+..++++++++ |+++.+|.... .+++....+ .+++++.++..+. .
T Consensus 216 ~~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~ 287 (333)
T cd08296 216 KEDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---A 287 (333)
T ss_pred CccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---H
Confidence 44566666654 36999999997667889999999997 99999998653 233343333 5699999886443 3
Q ss_pred CcHHHHHHHHHcCCCCC
Q 018627 328 TDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~ 344 (353)
+++.++++++..+++++
T Consensus 288 ~~~~~~~~~~~~~~l~~ 304 (333)
T cd08296 288 LDSEDTLKFSALHGVRP 304 (333)
T ss_pred HHHHHHHHHHHhCCCCc
Confidence 57888999998887754
No 36
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=7.4e-40 Score=309.40 Aligned_cols=300 Identities=28% Similarity=0.405 Sum_probs=259.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++.+++.++++.+.+.|++.+++|+||+.++++|++|+..+.+.+ .+|.++|+|++|+|+++|+++..++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 6899999887779999999999999999999999999999998877654 3468999999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++.+...|+.|..|+.|..++|++..+...+ . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------~g~~~~~~~v~~~~~~~~P~~l 139 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIG---T------------------DGGFAEYLLVPSRRLVKLPRGL 139 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCcc---C------------------CCcceeeEEecHHHeEECCCCC
Confidence 999999999999999999999999999988864332 1 2599999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHh-ccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
++++++.++..+.|||+++.+. ..+.++++|||+|+|++|++++++|+.+| . +|+++.+++++.+.++++|++++++
T Consensus 140 s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 9999999999999999998665 46888999999999779999999999999 6 8888989999999999999999888
Q ss_pred CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecC
Q 018627 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG 322 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 322 (353)
++ .. +.+.++++.++ ++|+++|++|+......++++++++ |+++.+|.... .. +.... +.+++++.++...
T Consensus 219 ~~--~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~-~~--~~~~~~~~~~~~~~~~~~~ 291 (340)
T cd05284 219 AS--DD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH-GR--LPTSDLVPTEISVIGSLWG 291 (340)
T ss_pred CC--cc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-Cc--cCHHHhhhcceEEEEEecc
Confidence 76 33 77788877766 8999999999767889999999997 99999997653 22 22222 3568888877543
Q ss_pred CCCCCCcHHHHHHHHHcCCCCC
Q 018627 323 GWKPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 323 ~~~~~~~~~~~~~~l~~g~i~~ 344 (353)
. .+.+.++++++++|++++
T Consensus 292 ~---~~~~~~~~~~l~~g~l~~ 310 (340)
T cd05284 292 T---RAELVEVVALAESGKVKV 310 (340)
T ss_pred c---HHHHHHHHHHHHhCCCCc
Confidence 2 467899999999998864
No 37
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=7.2e-40 Score=309.45 Aligned_cols=302 Identities=22% Similarity=0.323 Sum_probs=250.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++.+++. ++++++|.|+|+++||+||+.++++|++|++.+.+.. ++|.++|||++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999998876 9999999999999999999999999999999887764 3588999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
+|+..+...|+.|..|..+++++|.+.... +.. . .|+|+||++++.+.++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~~~~~~~~~~~ip~~~~~~ 138 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL--GVH-R------------------DGGFSEYAVVPAKNAHRIPDAIADQ 138 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCceE--EEc-c------------------CCcceeeEEechHHeEECcCCCCHH
Confidence 999999999999999999999999765431 111 1 2589999999999999999999998
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
+++ +..++.+++. +.+..++++|++|||+|+|++|++++|+|++ +|++.++++++++++.++++++|++.+++++
T Consensus 139 ~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~-- 214 (339)
T PRK10083 139 YAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNA-- 214 (339)
T ss_pred HHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCc--
Confidence 876 4457888886 4477889999999999999999999999997 5997788899999999999999999998876
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (353)
+.++.+.+... +..+|++||++|.+..+..++++++++ |+++.+|...... .+....+ .+++++.+... ..
T Consensus 215 ~~~~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~~ 286 (339)
T PRK10083 215 QEPLGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPS--EIVQQGITGKELSIFSSRL----NA 286 (339)
T ss_pred cccHHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCc--eecHHHHhhcceEEEEEec----Ch
Confidence 34566655431 115679999999777889999999997 9999999764322 2222222 35777776543 24
Q ss_pred CcHHHHHHHHHcCCCCCCCCc
Q 018627 328 TDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~~~li 348 (353)
+++.++++++.+|++++.+++
T Consensus 287 ~~~~~~~~~~~~g~l~~~~~~ 307 (339)
T PRK10083 287 NKFPVVIDWLSKGLIDPEKLI 307 (339)
T ss_pred hhHHHHHHHHHcCCCChHHhe
Confidence 679999999999999876544
No 38
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.3e-39 Score=309.16 Aligned_cols=306 Identities=26% Similarity=0.341 Sum_probs=256.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------------CCCcccccceeEEEEEeCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------------IFPRIFGHEASGIVESVGP 80 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------------~~p~~~G~e~~G~V~~vG~ 80 (353)
|||+++++++. ++++++|.|++.++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999998876 9999999999999999999999999999998877642 3577899999999999999
Q ss_pred CCC--CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC-
Q 018627 81 GVT--EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (353)
Q Consensus 81 ~~~--~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~- 157 (353)
++. ++++||+|++.+..+|+.|..|..|..++|.... ..|.. . ...|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~-~----------------~~~g~~~~~~~~~~~~ 140 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD--LYGFQ-N----------------NVNGGMAEYMRFPKEA 140 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc--ceeec-c----------------CCCCcceeeEEccccc
Confidence 998 8999999999999999999999999999997543 22321 0 012599999999988
Q ss_pred ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (353)
Q Consensus 158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 237 (353)
.++++|+++++++++.+ .++.++|+++ +..++++|++|||.|+|++|++++++|+++|+..++++++++++.+.++++
T Consensus 141 ~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 218 (350)
T cd08256 141 IVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKF 218 (350)
T ss_pred ceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHc
Confidence 57899999999999988 7999999997 778899999999977799999999999999986788999999999999999
Q ss_pred CCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEE
Q 018627 238 GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (353)
Q Consensus 238 G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (353)
|++.++++. ..++.+.+.+++++ ++|++||++|.+..+..++++++++ |+++.+|.......+.+......+++++
T Consensus 219 g~~~v~~~~--~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i 295 (350)
T cd08256 219 GADVVLNPP--EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDV 295 (350)
T ss_pred CCcEEecCC--CcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEE
Confidence 998888775 45677778877776 8999999999766788899999997 9999998765433333222212357778
Q ss_pred EeeecCCCCCCCcHHHHHHHHHcCCCCCCCC
Q 018627 317 KGSLFGGWKPKTDLPSLVNRYLKKVRNTRKP 347 (353)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~l 347 (353)
.++.... ..+.++++++++|.+++.++
T Consensus 296 ~~~~~~~----~~~~~~~~~~~~g~l~~~~~ 322 (350)
T cd08256 296 LGSHLGP----YCYPIAIDLIASGRLPTDGI 322 (350)
T ss_pred EEeccCc----hhHHHHHHHHHcCCCChhHh
Confidence 7776443 46889999999999987643
No 39
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=9.5e-40 Score=316.51 Aligned_cols=302 Identities=19% Similarity=0.246 Sum_probs=240.5
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhh-ccCC---------CCCcccccceeEEEEEeCC
Q 018627 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA---------IFPRIFGHEASGIVESVGP 80 (353)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~-~g~~---------~~p~~~G~e~~G~V~~vG~ 80 (353)
|.|+|++++++++ ++++++|.|+|+++||+|||.++|||++|++.+ .|.. .+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 3689999999986 999999999999999999999999999999876 3431 3678999999999999999
Q ss_pred CCC-CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--
Q 018627 81 GVT-EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-- 157 (353)
Q Consensus 81 ~~~-~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-- 157 (353)
+++ +|++||||++.+...|+.|..|. + .|.. . .|+|+||+++|++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~-~------------------~G~~aey~~v~~~~~ 127 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYT-Y------------------PGGLATYHIIPNEVM 127 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------cccc-C------------------CCcceEEEEecHHhc
Confidence 998 69999999999888898888773 1 0111 1 2599999999987
Q ss_pred --ceEECCCCCChhhhhhhchhhh---HHHHHH--------HHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCC--CCeE
Q 018627 158 --CAVKVSSIAPLEKICLLSCGLS---AGLGAA--------WNVADISKGSTVVIFGL-GTVGLSVAQGAKARG--ASRI 221 (353)
Q Consensus 158 --~v~~iP~~l~~~~aa~l~~~~~---ta~~al--------~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g--~~~v 221 (353)
.++++|+++++++++.+. +++ +++.++ .+.+++++|++|+|+|+ |++|++++|+|+++| +.+|
T Consensus 128 ~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 128 EQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred cCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 589999999999988652 222 233332 24567899999999985 999999999999975 4579
Q ss_pred EEEcCChhhHHHHHhC--------CCc-eEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceE
Q 018627 222 IGVDTNPEKCEKAKAF--------GVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLA 291 (353)
Q Consensus 222 i~~~~~~~~~~~~~~~--------G~~-~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~ 291 (353)
++++++++|++.++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|.+..+..++++++++ |++
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 9999999999999997 766 4566542 24677788888777 8999999999878899999999997 988
Q ss_pred EEEcCCC-CCCceecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627 292 VTLGVPK-LKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCGN 351 (353)
Q Consensus 292 v~~g~~~-~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~~ 351 (353)
+.++... .....+++...+ +++++++|+..+. +++++++++++.+|++++.++|++.
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~ 343 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHI 343 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEE
Confidence 7765432 211233443333 5699999986543 4689999999999999999888763
No 40
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2e-39 Score=307.17 Aligned_cols=308 Identities=30% Similarity=0.416 Sum_probs=258.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
|||+++.+++. +++.+.|.|.| .++||+||+.++++|++|+..+.+.+ ++|.++|+|++|+|+++|++++++++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999988877 89999999999 99999999999999999998887754 567899999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCC
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 166 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l 166 (353)
|+|++.+...|+.|.+|+.|++.+|++......+... ..|+|++|++++++ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~g~~~~~~~v~~~~~~~~~lP~~~ 141 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR------------------IDGGQAEYVRVPYADMNLAKIPDGL 141 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccC------------------CCCeeeEEEEecchhCeEEECCCCC
Confidence 9999999999999999999999999886532211000 12599999999987 899999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
++++++.++..+.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|+.+++++++++++.+.++++|++.++++.
T Consensus 142 ~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~ 220 (347)
T cd05278 142 PDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220 (347)
T ss_pred CHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCC
Confidence 9999999999999999997 678899999999988899999999999999965788888889999999999999988876
Q ss_pred CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (353)
..++.+.++..+++ ++|++||++++...+..++++++++ |+++.+|..............+.+++++.++....
T Consensus 221 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (347)
T cd05278 221 --NGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-- 295 (347)
T ss_pred --cchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc--
Confidence 45677778777665 8999999998756789999999997 99999986544221112222234677777654332
Q ss_pred CCCcHHHHHHHHHcCCCCCCC
Q 018627 326 PKTDLPSLVNRYLKKVRNTRK 346 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~~~ 346 (353)
.+.+.++++++.++++++.+
T Consensus 296 -~~~~~~~~~~~~~~~l~~~~ 315 (347)
T cd05278 296 -RARMPELLDLIEEGKIDPSK 315 (347)
T ss_pred -hhHHHHHHHHHHcCCCChhH
Confidence 46799999999999988654
No 41
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=7.8e-40 Score=305.52 Aligned_cols=276 Identities=21% Similarity=0.259 Sum_probs=219.3
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecc-hhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLC-RSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~-~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~ 84 (353)
+|||+++.+++. ++++++|.|+|+++||||||.+++|| ++|++.+.|.+ .+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998876 99999999999999999999999996 79998887754 358999999999999999998 6
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~ 164 (353)
|++||||+.. |..|..|..+ . .|+|+||+.+|++.++++|+
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~~-----------------~------------------~G~~aey~~v~~~~~~~ip~ 119 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVRG-----------------L------------------FGGASKRLVTPASRVCRLDP 119 (308)
T ss_pred CCCCCEEEEe----Cccccccccc-----------------c------------------CCcccceEEcCHHHceeCCC
Confidence 9999999874 2223221110 1 15999999999999999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
+++++. +.+. .+.|||+++.+ . ..+++++||+|+|++|++++|+|+++|++.|++++.++++++.++++ .+++
T Consensus 120 ~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~ 192 (308)
T TIGR01202 120 ALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLD 192 (308)
T ss_pred CCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccC
Confidence 999864 5554 67899999844 3 34689999999999999999999999996677888888887766553 3344
Q ss_pred CCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (353)
+. + . .+.++|++|||+|++..++.++++++++ |+++++|.......+++... +.+++++.++....
T Consensus 193 ~~--~-~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~i~~~~~~~- 258 (308)
T TIGR01202 193 PE--K-D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVPA-FMKEARLRIAAEWQ- 258 (308)
T ss_pred hh--h-c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccchh-hhcceEEEEecccc-
Confidence 32 1 0 1238999999999877889999999997 99999998654334443333 35688888775432
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627 325 KPKTDLPSLVNRYLKKVRNTRKPSCGN 351 (353)
Q Consensus 325 ~~~~~~~~~~~~l~~g~i~~~~li~~~ 351 (353)
.++++++++++++|++++++++++.
T Consensus 259 --~~~~~~~~~l~~~g~i~~~~~it~~ 283 (308)
T TIGR01202 259 --PGDLHAVRELIESGALSLDGLITHQ 283 (308)
T ss_pred --hhHHHHHHHHHHcCCCChhhcccee
Confidence 4689999999999999999998764
No 42
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=8.2e-39 Score=305.40 Aligned_cols=307 Identities=25% Similarity=0.382 Sum_probs=249.4
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCCC
Q 018627 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEF 85 (353)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~ 85 (353)
.|++.|+..+.. +++++.+.|.++++||+||+.++++|++|++.+.+. ..+|.++|||++|+|+++|+++.+|
T Consensus 17 ~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
T PLN02702 17 ENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHL 95 (364)
T ss_pred ccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCC
Confidence 466677677655 999999999999999999999999999999887652 1357899999999999999999999
Q ss_pred CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
++||+|++.+..+|++|..|+.|.++.|++..+. +.... .|+|++|+.++.+.++++|++
T Consensus 96 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~------------------~g~~~~y~~v~~~~~~~~P~~ 155 (364)
T PLN02702 96 VVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF--ATPPV------------------HGSLANQVVHPADLCFKLPEN 155 (364)
T ss_pred CCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc--CCCCC------------------CCcccceEEcchHHeEECCCC
Confidence 9999999999999999999999999999874321 11101 259999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+++.+++... +++++++++ +..++.+|++|||+|+|++|++++++|+++|++.|+++++++++.+.++++|++.++++
T Consensus 156 l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 233 (364)
T PLN02702 156 VSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLV 233 (364)
T ss_pred CCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEec
Confidence 9999987633 566688887 77889999999999889999999999999999778899999999999999999988765
Q ss_pred CCCCccHHHHHHHH---hcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchh-hhhcCcEEEeeec
Q 018627 246 NDNNEPVQQVIKRI---TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLF 321 (353)
Q Consensus 246 ~~~~~~~~~~~~~~---~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~ 321 (353)
.....++.+.+..+ .++++|++||++|++..+..++++++++ |+++.+|..... ..+... ..++++++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 234 STNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVGVFR 310 (364)
T ss_pred CcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEEecc
Confidence 43245566666544 2348999999999777899999999996 999999975332 222222 2356888888753
Q ss_pred CCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627 322 GGWKPKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 322 ~~~~~~~~~~~~~~~l~~g~i~~~~li 348 (353)
. ..++..++++++++++++++++
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~ 333 (364)
T PLN02702 311 Y----RNTWPLCLEFLRSGKIDVKPLI 333 (364)
T ss_pred C----hHHHHHHHHHHHcCCCCchHhe
Confidence 2 3578899999999998765544
No 43
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=8.6e-39 Score=307.58 Aligned_cols=323 Identities=28% Similarity=0.366 Sum_probs=259.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
|+|+++.++++ ++++++|.|.|. +++|+||+.++++|++|+..+.|.+ ++|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999988765 999999999984 9999999999999999999988865 458899999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccccccc--cccccCCccccccccCCc-cccccCccceeeeEEEeCC--ceEECC
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER--RGVMHSDQQTRFSIKGKP-VYHYCAVSSFSEYTVVHSG--CAVKVS 163 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~--~g~~~~~g~~~~~~~~~~-~~~~~~~g~~a~~~~~~~~--~v~~iP 163 (353)
|+|++.+...|++|.+|+.+..+.|.+..... ++.++.. ..++.|.. .++ ...|+|+||++++++ .++++|
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~lp 155 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA---GAGIFGYSHLTG-GYAGGQAEYVRVPFADVGPFKIP 155 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccc---cccccccccccC-CCCCeeEEEEEcccccCeEEECC
Confidence 99999999999999999999999998764321 1111000 00000000 000 013699999999987 899999
Q ss_pred CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (353)
Q Consensus 164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~ 243 (353)
+++++++++.++..++|||+++ +..++.+|++|||+|+|++|++++++|++.|+.+|+++++++++.+.+++++...++
T Consensus 156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi 234 (386)
T cd08283 156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI 234 (386)
T ss_pred CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence 9999999999999999999998 778999999999998899999999999999986699999999999999998544677
Q ss_pred CCCCCCc-cHHHHHHHHhcC-CccEEEeccCC---------------------hHHHHHHHHHhccCCceEEEEcCCCCC
Q 018627 244 NPNDNNE-PVQQVIKRITDG-GADYSFECIGD---------------------TGMITTALQSCCDGWGLAVTLGVPKLK 300 (353)
Q Consensus 244 ~~~~~~~-~~~~~~~~~~~~-~~dvv~d~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (353)
++. .. ++.+.++.++++ ++|++||++|+ ...+..++++++++ |+++.+|.....
T Consensus 235 ~~~--~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~ 311 (386)
T cd08283 235 NFE--EVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT 311 (386)
T ss_pred cCC--cchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC
Confidence 665 33 477788877776 89999999975 23678899999997 999999976542
Q ss_pred Cceecch-hhhhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627 301 PEVAAHY-GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 301 ~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li 348 (353)
...+.. ..+.+++++.++... ..+.+.++++++.++++.+.+++
T Consensus 312 -~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~ 356 (386)
T cd08283 312 -VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFII 356 (386)
T ss_pred -cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHce
Confidence 223333 224568888876432 24679999999999999876554
No 44
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.3e-39 Score=304.99 Aligned_cols=306 Identities=25% Similarity=0.363 Sum_probs=260.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---------------CCCcccccceeEEEEE
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---------------IFPRIFGHEASGIVES 77 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---------------~~p~~~G~e~~G~V~~ 77 (353)
|||+++..++.+++++++|.|+++++||+||+.++++|++|+..+.+.+ .+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 7899999888889999999999999999999999999999998876642 2467899999999999
Q ss_pred eCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627 78 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (353)
Q Consensus 78 vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~ 157 (353)
+|+++.++++||+|++++...|+.|..|.++.+++|...... |.. ..|+|++|+.++.+
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~ 139 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIF-------------------QDGGYAEYVIVPHS 139 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eee-------------------ccCcceeeEEecHH
Confidence 999999999999999999999999999999999999665321 211 12589999999999
Q ss_pred ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (353)
Q Consensus 158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 237 (353)
.++++|+++++.+++.+.+.+.+||+++.+...+.++++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++
T Consensus 140 ~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 219 (350)
T cd08240 140 RYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219 (350)
T ss_pred HeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 99999999999999999999999999987766677899999998899999999999999997889998999999999999
Q ss_pred CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEE
Q 018627 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 317 (353)
Q Consensus 238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 317 (353)
|++.+++.+ +..+.+.+.+..++++|++||++|.+..+..++++++++ |+++.+|........++... .++++++.
T Consensus 220 g~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~ 295 (350)
T cd08240 220 GADVVVNGS--DPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQ 295 (350)
T ss_pred CCcEEecCC--CccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEE
Confidence 998887765 445666677665558999999999767899999999997 99999987655333333333 34788888
Q ss_pred eeecCCCCCCCcHHHHHHHHHcCCCCCCC
Q 018627 318 GSLFGGWKPKTDLPSLVNRYLKKVRNTRK 346 (353)
Q Consensus 318 g~~~~~~~~~~~~~~~~~~l~~g~i~~~~ 346 (353)
++.... .+++.+++++++++.+++.+
T Consensus 296 ~~~~~~---~~~~~~~~~ll~~~~i~~~~ 321 (350)
T cd08240 296 GSYVGS---LEELRELVALAKAGKLKPIP 321 (350)
T ss_pred EcccCC---HHHHHHHHHHHHcCCCccce
Confidence 776543 36789999999999887543
No 45
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.6e-38 Score=299.66 Aligned_cols=308 Identities=28% Similarity=0.426 Sum_probs=261.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++..++.++.+++.|.|.+.+++|+||+.++++|++|+..+.|.. .+|.++|+|++|+|+.+|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 7899998888789999999999999999999999999999998887764 3478999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~ 167 (353)
+|++.+...|++|.+|+.|..+.|..+.. .|.. ..|+|++|+.+++. .++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~~iP~~~~ 139 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFT-------------------HPGSFAEYVAVPRADVNLVRLPDDVD 139 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc--cccC-------------------CCCcceeEEEcccccCceEECCCCCC
Confidence 99987778899999999999999998642 2221 12589999999974 8999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~ 247 (353)
+++++.++.++.+||+++.+..++.++++|||+|+|++|++++++|++.|+ +|+++.+++++.+.++++|++.+++++.
T Consensus 140 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 218 (345)
T cd08260 140 FVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE 218 (345)
T ss_pred HHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc
Confidence 999999999999999998777889999999999999999999999999999 8999989999999999999999988762
Q ss_pred CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCc-eecchhhh-hcCcEEEeeecCCCC
Q 018627 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLF-LSGRTLKGSLFGGWK 325 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~~~ 325 (353)
+.++.+.+..+..+++|++|||+|+...+...+++++++ |+++.+|....... ..+....+ .+++++.++...
T Consensus 219 -~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 293 (345)
T cd08260 219 -VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM--- 293 (345)
T ss_pred -chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---
Confidence 256777777766558999999998767788999999997 99999997654322 23333333 457888876543
Q ss_pred CCCcHHHHHHHHHcCCCCCCCC
Q 018627 326 PKTDLPSLVNRYLKKVRNTRKP 347 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~~~l 347 (353)
..+.+.+++++++++++.+.++
T Consensus 294 ~~~~~~~~~~l~~~~~i~~~~~ 315 (345)
T cd08260 294 PAHRYDAMLALIASGKLDPEPL 315 (345)
T ss_pred CHHHHHHHHHHHHcCCCChhhh
Confidence 2467999999999999886553
No 46
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=3.5e-39 Score=297.20 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=215.9
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCcc
Q 018627 66 IFGHEASGIVESVGPGVT------EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV 139 (353)
Q Consensus 66 ~~G~e~~G~V~~vG~~~~------~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~ 139 (353)
++|||++|+|+++|++++ +|++||||++.+...|+.|.+|+.|+++.|++.... |....++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~----------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY--GHEALDS----------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc--CcccccC-----------
Confidence 589999999999999998 899999999999999999999999999999876542 2110000
Q ss_pred ccccCccceeeeEEEeCC-ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC
Q 018627 140 YHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218 (353)
Q Consensus 140 ~~~~~~g~~a~~~~~~~~-~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~ 218 (353)
+....|+|+||+.+|++ .++++|+++++++++.+++.+.|+|+++. .....+|++|||+|+|++|++++|+|+++|+
T Consensus 68 -~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~ 145 (280)
T TIGR03366 68 -GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAGA 145 (280)
T ss_pred -CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 00012599999999997 69999999999999999999999999974 4566699999999999999999999999999
Q ss_pred CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627 219 SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 219 ~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
++|++++++++|++.++++|++.++++. + ..+.+++.+++ ++|++||++|.+..+..++++++++ |+++.+|..
T Consensus 146 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~--~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~ 220 (280)
T TIGR03366 146 ARVVAADPSPDRRELALSFGATALAEPE--V--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV 220 (280)
T ss_pred CEEEEECCCHHHHHHHHHcCCcEecCch--h--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccC
Confidence 6699999999999999999999888764 2 24556666665 8999999999888899999999997 999999975
Q ss_pred CCCCceecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHc--CCCCCCCCccCC
Q 018627 298 KLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLK--KVRNTRKPSCGN 351 (353)
Q Consensus 298 ~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~--g~i~~~~li~~~ 351 (353)
......++++..+ .+++++.|+..+. .++++++++++.+ ++++++++|+++
T Consensus 221 ~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~ 274 (280)
T TIGR03366 221 FPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKP 274 (280)
T ss_pred CCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcc
Confidence 4323334444444 5699999886433 4689999999998 478888999875
No 47
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.2e-38 Score=300.08 Aligned_cols=306 Identities=27% Similarity=0.395 Sum_probs=258.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
|||+++.+++. ++++++|.|+| +++||+||++++++|++|+..+.|.+ .+|.++|||++|+|+++|+++.++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999988886 99999999996 89999999999999999999887764 347899999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCC
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 166 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l 166 (353)
|+|++.+...|+.|.+|..+.++.|....+. .|.. . .|+|++|+.++.+ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~------------------~g~~~~~~~v~~~~~~~~~lp~~~ 139 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNL-I------------------DGTQAEYVRIPHADNSLYKLPEGV 139 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc-cccc-c------------------CCeeeeEEEcccccCceEECCCCC
Confidence 9999999999999999999999999876441 1211 1 2589999999987 899999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
++.+++.+...+++||.++....++.+|++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (345)
T cd08286 140 DEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA 219 (345)
T ss_pred CHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccc
Confidence 99999999999999999877778899999999998899999999999999944888999999999999999999888876
Q ss_pred CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCC
Q 018627 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW 324 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~ 324 (353)
..++.+.+.+..++ ++|++|||+|....+..+++.++++ |+++.+|..... .++.+.. +.+++++.+....
T Consensus 220 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-- 292 (345)
T cd08286 220 --KGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD-- 292 (345)
T ss_pred --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc--
Confidence 45577777776665 8999999998777788999999997 999999975433 3334443 3468888765322
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCCc
Q 018627 325 KPKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 325 ~~~~~~~~~~~~l~~g~i~~~~li 348 (353)
.+.+.+++++++++.+++.+++
T Consensus 293 --~~~~~~~~~~~~~~~l~~~~~~ 314 (345)
T cd08286 293 --TNTTPMLLKLVSSGKLDPSKLV 314 (345)
T ss_pred --hhhHHHHHHHHHcCCCChHHcE
Confidence 2568889999999998876654
No 48
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=2e-38 Score=305.79 Aligned_cols=309 Identities=20% Similarity=0.228 Sum_probs=253.4
Q ss_pred ccceeeEEEEec--CC---CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-------------CCCcccccc
Q 018627 9 QVITCKAAVAWG--AG---QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFPRIFGHE 70 (353)
Q Consensus 9 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-------------~~p~~~G~e 70 (353)
+|.+|+|+++.. .+ +.++++++|.|.++++||+||+.++++|++|++.+.+.. .++.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 677899999853 22 238899999999999999999999999999988776541 123589999
Q ss_pred eeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceee
Q 018627 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (353)
Q Consensus 71 ~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 150 (353)
++|+|+++|++++.+++||+|++.+...|+.|..|..+..++|.+... .|.... .|+|++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~------------------~g~~a~ 148 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYETN------------------YGSFAQ 148 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--ccccCC------------------CCccee
Confidence 999999999999999999999999999999999999999999976532 222111 259999
Q ss_pred eEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHh--ccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627 151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (353)
Q Consensus 151 ~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~--~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~ 227 (353)
|++++...++++|+++++++++.+.+++.|||+++... +++++|++|||+|+ |++|++++++|+++|+ ++++++++
T Consensus 149 y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s 227 (393)
T cd08246 149 FALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSS 227 (393)
T ss_pred EEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCC
Confidence 99999999999999999999999999999999998654 67899999999997 9999999999999999 77788899
Q ss_pred hhhHHHHHhCCCceEeCCCCC--------------------CccHHHHHHHHhcC--CccEEEeccCChHHHHHHHHHhc
Q 018627 228 PEKCEKAKAFGVTEFLNPNDN--------------------NEPVQQVIKRITDG--GADYSFECIGDTGMITTALQSCC 285 (353)
Q Consensus 228 ~~~~~~~~~~G~~~~~~~~~~--------------------~~~~~~~~~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~ 285 (353)
+++.+.++++|++.++++++. ...+.+.+.+++++ ++|++|||+|. ..+..++++++
T Consensus 228 ~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~ 306 (393)
T cd08246 228 EEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCD 306 (393)
T ss_pred HHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhc
Confidence 999999999999998886421 01355667777765 69999999997 66888999999
Q ss_pred cCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627 286 DGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 286 ~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~ 344 (353)
++ |+++.+|..... ...+....+ .++.++.+++... .+++.+++++++++++.+
T Consensus 307 ~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~ 361 (393)
T cd08246 307 RG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP 361 (393)
T ss_pred cC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee
Confidence 96 999999875432 122222223 4588888876554 357889999999998874
No 49
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=8.4e-38 Score=298.78 Aligned_cols=330 Identities=34% Similarity=0.497 Sum_probs=263.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC---CCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE---FNE 87 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~---~~v 87 (353)
|||+++.+++.++++++.|.|.++++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+.+|+++.+ +++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~ 80 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSV 80 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCCCCCcccccccceEEEEeCCCCCCCCcCCC
Confidence 6899999988779999999999999999999999999999998887754 56789999999999999999888 999
Q ss_pred CCeEEeecccCCCCCcccccCCCCCccccccc-ccccccCCcccc-ccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTR-FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~-~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
||+|++.+...|+.|..|.-++.++|++.... ..+.-+-+|... +.-.+.+.+- ...|+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~~ 159 (367)
T cd08263 81 GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLPES 159 (367)
T ss_pred CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccc-ccCCcceeEEEechhhEEECCCC
Confidence 99999988889999999999999999976411 100000000000 0000000000 01369999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+++.+++.++..+.|||+++.+...+.++++|||+|+|++|++++++|+.+|+.+++++++++++.+.++++|++.++++
T Consensus 160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~ 239 (367)
T cd08263 160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239 (367)
T ss_pred CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence 99999999999999999998777788999999999879999999999999999559999899999999999999999887
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (353)
+ ..++.+.++...++ ++|++||++++......++++++++ |+++.+|.........+....+ .+++++.++...
T Consensus 240 ~--~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 315 (367)
T cd08263 240 A--KEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA- 315 (367)
T ss_pred C--cccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC-
Confidence 6 45677778777665 8999999999854788999999997 9999998764422333444444 468888775322
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627 324 WKPKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 324 ~~~~~~~~~~~~~l~~g~i~~~~li 348 (353)
...+.+.++++++.++++++.+++
T Consensus 316 -~~~~~~~~~~~ll~~~~l~~~~~~ 339 (367)
T cd08263 316 -RPRQDLPELVGLAASGKLDPEALV 339 (367)
T ss_pred -CcHHHHHHHHHHHHcCCCCcccce
Confidence 224678999999999999876544
No 50
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=7.8e-38 Score=295.95 Aligned_cols=302 Identities=25% Similarity=0.340 Sum_probs=247.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
||++++.+++..+++.++|.|.|.++||+||++++++|++|+..+.+. ..+|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 689999888888999999999999999999999999999999865442 14678999999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++.+..+|..|..|+.+.+++|+...+ .+.. . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~iP~~l 139 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG--VGVN-R------------------PGAFAEYLVIPAFNVWKIPDDI 139 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce--eeec-C------------------CCcceeeEEechHHeEECcCCC
Confidence 99999999999999999999999999976532 2221 1 2599999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
++++++.+ ..+.++++++.. ...+|++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++|++.+++++
T Consensus 140 ~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~ 216 (341)
T PRK05396 140 PDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA 216 (341)
T ss_pred CHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence 99988755 466777666532 346899999988899999999999999996688888899999999999999988876
Q ss_pred CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (353)
..++.+.+++++++ ++|++|||+|....+..++++++++ |+++.+|.......+.+ ...+++++++.++.....
T Consensus 217 --~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~- 291 (341)
T PRK05396 217 --KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGREM- 291 (341)
T ss_pred --cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccCc-
Confidence 45677788777765 9999999999877889999999997 99999997654334332 222356888877653221
Q ss_pred CCCcHHHHHHHHHcCCCCCC
Q 018627 326 PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~~ 345 (353)
.+.+..+++++.++ +.+.
T Consensus 292 -~~~~~~~~~~~~~~-~~~~ 309 (341)
T PRK05396 292 -FETWYKMSALLQSG-LDLS 309 (341)
T ss_pred -cchHHHHHHHHHcC-CChh
Confidence 34566788888888 4333
No 51
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.2e-37 Score=294.87 Aligned_cols=308 Identities=27% Similarity=0.367 Sum_probs=253.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|+|+++..++ .++++++|.|.|. ++||+||+.++++|+.|+..+.+.+ .+|.++|+|++|+|+++|+++.++++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCCcccccceEEEEEeeCCCccccCCCC
Confidence 6799988775 4999999999985 9999999999999999998887754 4578999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~ 167 (353)
+|++.+..+|+.|.+|+.++.++|+.....+.. +. ....|+|++|++++++ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------~~~~g~~~~~~~v~~~~~~~~~~p~~l~ 142 (344)
T cd08284 80 RVVSPFTIACGECFYCRRGQSGRCAKGGLFGYA-----GS------------PNLDGAQAEYVRVPFADGTLLKLPDGLS 142 (344)
T ss_pred EEEEcccCCCCCChHHhCcCcccCCCCcccccc-----cc------------CCCCCceeEEEEcccccCceEECCCCCC
Confidence 999999899999999999999999875432110 00 0012599999999864 9999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~ 247 (353)
+++++.+++.++|||+++. ..++.+|++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|+. .++++
T Consensus 143 ~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~- 219 (344)
T cd08284 143 DEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFE- 219 (344)
T ss_pred HHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecC-
Confidence 9999999999999999984 47889999999998899999999999999975789998899999999999975 34444
Q ss_pred CCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC
Q 018627 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK 325 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 325 (353)
..++...+.+++++ ++|++||+++++..+..++++++++ |+++.+|..... ........ +.+++++.+.. ..
T Consensus 220 -~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~---~~ 293 (344)
T cd08284 220 -DAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR---CP 293 (344)
T ss_pred -CcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---CC
Confidence 35677778877776 8999999999877889999999996 999999976532 22222222 34688876542 22
Q ss_pred CCCcHHHHHHHHHcCCCCCCCC
Q 018627 326 PKTDLPSLVNRYLKKVRNTRKP 347 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~~~l 347 (353)
..+.+.++++++.++++++.++
T Consensus 294 ~~~~~~~~~~~~~~~~i~~~~~ 315 (344)
T cd08284 294 VRSLFPELLPLLESGRLDLEFL 315 (344)
T ss_pred cchhHHHHHHHHHcCCCChHHh
Confidence 3578999999999999986543
No 52
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=3.6e-37 Score=287.30 Aligned_cols=297 Identities=28% Similarity=0.433 Sum_probs=249.0
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
|||++..+++ +.+++++++.|.+.++||+|||.++++|++|...+.+.+ ..|.++|+|++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5789988765 349999999999999999999999999999998877754 457899999999999999999999999
Q ss_pred CeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 89 EHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 89 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
|+|++.+. ..|+.|.+|+.+..+.|+.... .|.. ..|+|++|++++.+.++++|++++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~~ 139 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--IGTQ-------------------ADGGFAEYVLVPEESLHELPENLS 139 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce--eeec-------------------CCCceEEEEEcchHHeEECcCCCC
Confidence 99999875 6899999999999999976421 1211 125999999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+++++ +...+.++|+++....+++++++|||.|+|.+|++++++|+++|+ +|+.+ .+++++.++++++|++++ ++
T Consensus 140 ~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~ 216 (306)
T cd08258 140 LEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NG 216 (306)
T ss_pred HHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CC
Confidence 99887 555888999998888889999999998779999999999999999 77776 345668888899999877 76
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (353)
. ..++.+.+....++ ++|+++|++|+...+...++.++++ |+++.+|.... ....+....+ ++++++.|++.+.
T Consensus 217 ~--~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~ 292 (306)
T cd08258 217 G--EEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSST 292 (306)
T ss_pred C--cCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecCc
Confidence 5 56777788777665 8999999998767888999999997 99999998652 2233333333 5799999998765
Q ss_pred CCCCCcHHHHHHHHHcC
Q 018627 324 WKPKTDLPSLVNRYLKK 340 (353)
Q Consensus 324 ~~~~~~~~~~~~~l~~g 340 (353)
++|++++++++++|
T Consensus 293 ---~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 ---PASWETALRLLASG 306 (306)
T ss_pred ---hHhHHHHHHHHhcC
Confidence 57899999999876
No 53
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.2e-37 Score=293.21 Aligned_cols=305 Identities=31% Similarity=0.449 Sum_probs=251.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++.+++. +++.+.|.|.| +++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++.++++||
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGD 79 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCCCCCcccccceEEEEEEeCCCCCccCCCC
Confidence 78999988776 99999999996 89999999999999999998887764 3478999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~ 167 (353)
+|++.....|+.|..|..|+.++|.+..+ .+.. .+ |+|+||+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lP~~l~ 138 (345)
T cd08287 80 FVIAPFAISDGTCPFCRAGFTTSCVHGGF--WGAF-VD------------------GGQGEYVRVPLADGTLVKVPGSPS 138 (345)
T ss_pred EEEeccccCCCCChhhhCcCcccCCCCCc--ccCC-CC------------------CceEEEEEcchhhCceEECCCCCC
Confidence 99986667799999999999999986543 1211 22 499999999974 9999999998
Q ss_pred hhhhh-----hhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627 168 LEKIC-----LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (353)
Q Consensus 168 ~~~aa-----~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~ 242 (353)
++++. .+...+.+|++++ ...++.+|++|+|.|+|++|++++|+|+++|++.++++++++++.+.++++|++.+
T Consensus 139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v 217 (345)
T cd08287 139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI 217 (345)
T ss_pred hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence 83221 2235788999987 46789999999998889999999999999999668999999999999999999999
Q ss_pred eCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hhhhcCcEEEeee
Q 018627 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSL 320 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 320 (353)
+++. ...+.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|..... ..+.. ..+.+++++.+..
T Consensus 218 ~~~~--~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 218 VAER--GEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG--VELDVRELFFRNVGLAGGP 292 (345)
T ss_pred ecCC--cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCCC--CccCHHHHHhcceEEEEec
Confidence 8886 45677778877766 8999999998877899999999997 999999876532 23333 3356699888754
Q ss_pred cCCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627 321 FGGWKPKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~g~i~~~~li 348 (353)
... .+.+.++++++.++++++.+++
T Consensus 293 ~~~---~~~~~~~~~~~~~~~l~~~~~~ 317 (345)
T cd08287 293 APV---RRYLPELLDDVLAGRINPGRVF 317 (345)
T ss_pred CCc---HHHHHHHHHHHHcCCCCHHHhE
Confidence 322 4679999999999999875543
No 54
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=4.4e-37 Score=290.78 Aligned_cols=303 Identities=29% Similarity=0.412 Sum_probs=254.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++.+++. +.+++.+.|++.+++|+||+.++++|+.|+..+.+.. .+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999988875 9999999999999999999999999999999887754 4578999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCc-----eEECCC
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC-----AVKVSS 164 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-----v~~iP~ 164 (353)
+|++.+...|++|..|..|+.++|.+.... |.. . .|+|++|+.++++. ++++|+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~v~v~~~~~~~~~~~~lP~ 138 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF--GNL-Y------------------DGGFAEYVRVPAWAVKRGGVLKLPD 138 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee--ccC-C------------------CCcceeeEEecccccccccEEECCC
Confidence 999999999999999999999999886542 211 1 25899999999988 999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
++++++++.+ .++.+||+++.. .++++|++|||+|+|.+|++++|+|++.|++.|+++.+++++.+.++++|++.+++
T Consensus 139 ~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~ 216 (343)
T cd08235 139 NVSFEEAALV-EPLACCINAQRK-AGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTID 216 (343)
T ss_pred CCCHHHHHhh-hHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEec
Confidence 9999999877 688999999854 58999999999988999999999999999944899989999999999999988888
Q ss_pred CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecC
Q 018627 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG 322 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 322 (353)
++ +.++.+.++...++ ++|++|||++....+...+++++++ |+++.+|.........+....+ ++++.+.++...
T Consensus 217 ~~--~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 293 (343)
T cd08235 217 AA--EEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA 293 (343)
T ss_pred CC--ccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC
Confidence 76 56677788777766 8999999999766888999999996 9999998654422233332222 457777665533
Q ss_pred CCCCCCcHHHHHHHHHcCCCCCC
Q 018627 323 GWKPKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 323 ~~~~~~~~~~~~~~l~~g~i~~~ 345 (353)
. .+.+.+++++++++++.+.
T Consensus 294 ~---~~~~~~~~~l~~~~~l~~~ 313 (343)
T cd08235 294 S---PEDYKEALELIASGKIDVK 313 (343)
T ss_pred C---hhhHHHHHHHHHcCCCChH
Confidence 2 4678899999999998753
No 55
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.4e-37 Score=289.82 Aligned_cols=292 Identities=24% Similarity=0.320 Sum_probs=241.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCeEE
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVL 92 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~ 92 (353)
|||+++.++++ ++++++|.|+++++||+||++++++|++|...+.|.++.|.++|||++|+|+++|++ +++||||.
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~ 76 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFPGVPGHEFVGIVEEGPEA---ELVGKRVV 76 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCCCCCccCceEEEEEEEeCCC---CCCCCeEE
Confidence 68999988764 999999999999999999999999999999988887677889999999999999987 68999999
Q ss_pred eecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhh
Q 018627 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 172 (353)
Q Consensus 93 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa 172 (353)
..+..+|+.|.+|..|.++.|.+.... +.... .|+|++|++++++.++++|+++++++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~~~~aa 136 (319)
T cd08242 77 GEINIACGRCEYCRRGLYTHCPNRTVL--GIVDR------------------DGAFAEYLTLPLENLHVVPDLVPDEQAV 136 (319)
T ss_pred ECCCcCCCCChhhhCcCcccCCCCccc--CccCC------------------CCceEEEEEechHHeEECcCCCCHHHhh
Confidence 999999999999999999999886532 11101 2589999999999999999999999888
Q ss_pred hhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccH
Q 018627 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (353)
Q Consensus 173 ~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 252 (353)
.+ ..+.+++.++ +..+++++++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|++.++++.. .
T Consensus 137 ~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~-- 209 (319)
T cd08242 137 FA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA--E-- 209 (319)
T ss_pred hh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc--c--
Confidence 64 3566676654 77889999999999889999999999999999 6999999999999999999988777641 1
Q ss_pred HHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCcHHH
Q 018627 253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPS 332 (353)
Q Consensus 253 ~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 332 (353)
..++++|++|||+|....+..++++++++ |+++..+.......+++.. .+.++.++.++..+ .+++
T Consensus 210 ------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~------~~~~ 275 (319)
T cd08242 210 ------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASFDLTK-AVVNEITLVGSRCG------PFAP 275 (319)
T ss_pred ------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCccCHHH-heecceEEEEEecc------cHHH
Confidence 12238999999998877789999999997 9999987654433333222 13458888776532 3889
Q ss_pred HHHHHHcCCCCCCCCcc
Q 018627 333 LVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 333 ~~~~l~~g~i~~~~li~ 349 (353)
+++++.+++|++.+++.
T Consensus 276 ~~~~~~~~~l~~~~~~~ 292 (319)
T cd08242 276 ALRLLRKGLVDVDPLIT 292 (319)
T ss_pred HHHHHHcCCCChhhceE
Confidence 99999999997665543
No 56
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.9e-37 Score=295.95 Aligned_cols=317 Identities=26% Similarity=0.376 Sum_probs=251.4
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
||++++.+++. ++++++|.|.+ .++||+|||+++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++||
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGD 79 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCCCCCceeccccEEEEEEeCCCCCcCCCCC
Confidence 67899888774 99999999996 79999999999999999999887764 4588999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~ 167 (353)
+|++.+..+|+.|..|+.++.+.|.+..+.+.+. ..| ..+ . ....|+|+||+.++.. .++++|++++
T Consensus 80 ~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~--~~~-----~~~--~--~~~~g~~a~y~~v~~~~~~~~~lP~~~~ 148 (375)
T cd08282 80 RVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGG--AYG-----YVD--M--GPYGGGQAEYLRVPYADFNLLKLPDRDG 148 (375)
T ss_pred EEEEeCCCCCCCCHHHHCcCcccCCCCCcccccc--ccc-----ccc--c--CCCCCeeeeEEEeecccCcEEECCCCCC
Confidence 9999999999999999999999998643221110 000 000 0 0012599999999976 8999999999
Q ss_pred hh---hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 168 LE---KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 168 ~~---~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
++ +++.+.+++++||+++ +.+++.+|++|||.|+|++|++++|+|+++|+.+|+++++++++.+.++++|+ ..++
T Consensus 149 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~ 226 (375)
T cd08282 149 AKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPID 226 (375)
T ss_pred hhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEec
Confidence 98 5677888999999998 77889999999998889999999999999998678889999999999999998 4556
Q ss_pred CCCCCccHHHHHHHHhcCCccEEEeccCChH-----------HHHHHHHHhccCCceEEEEcCCCCC-C----------c
Q 018627 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTG-----------MITTALQSCCDGWGLAVTLGVPKLK-P----------E 302 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~-~----------~ 302 (353)
+. +.++.+.+.+++++++|++|||+|... .+..++++++++ |+++.+|..... . .
T Consensus 227 ~~--~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~ 303 (375)
T cd08282 227 FS--DGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGE 303 (375)
T ss_pred cC--cccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCcc
Confidence 55 456777777766668999999998742 478999999997 999988864321 0 1
Q ss_pred eecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627 303 VAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 303 ~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~ 349 (353)
..+....+ .++..+.+.... ..+.+..++++++++++++.++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~ 348 (375)
T cd08282 304 LSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVS 348 (375)
T ss_pred ccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEE
Confidence 22232323 346666655322 246788999999999998765443
No 57
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3e-37 Score=296.70 Aligned_cols=307 Identities=28% Similarity=0.411 Sum_probs=247.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC----------CCCCcccccceeEEEEEeCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGIVESVGPGV 82 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~----------~~~p~~~G~e~~G~V~~vG~~~ 82 (353)
+.+.++.. . .++++++|.|+++++||+||++++++|++|++.+.+. ..+|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~-~-~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRY-P-ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeC-C-CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 34444443 3 4999999999999999999999999999999877521 1357899999999999999999
Q ss_pred CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC
Q 018627 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (353)
Q Consensus 83 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i 162 (353)
..|++||+|++.+..+|+.|..|..|++++|..... .|.. . .|+|++|+.++++.++++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~-~------------------~g~~~~~v~v~~~~~~~l 165 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFS-A------------------DGAFAEYIAVNARYAWEI 165 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeec-C------------------CCcceeeEEechHHeEEC
Confidence 999999999999999999999999999999986553 2211 1 258999999999999999
Q ss_pred CCCC-------ChhhhhhhchhhhHHHHHHHHh-ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627 163 SSIA-------PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (353)
Q Consensus 163 P~~l-------~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~ 234 (353)
|+++ +++ ++.+..++++||+++... .++++|++|||+|+|++|++++++|+++|+.+|+++++++++.+.+
T Consensus 166 P~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~ 244 (384)
T cd08265 166 NELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA 244 (384)
T ss_pred CccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 9863 445 555666899999998665 6899999999998899999999999999987799999999999999
Q ss_pred HhCCCceEeCCCCC-CccHHHHHHHHhcC-CccEEEeccCCh-HHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-
Q 018627 235 KAFGVTEFLNPNDN-NEPVQQVIKRITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF- 310 (353)
Q Consensus 235 ~~~G~~~~~~~~~~-~~~~~~~~~~~~~~-~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~- 310 (353)
+++|+++++++++. ..++.+.+++++++ ++|+++|++|.+ ..+..++++++++ |+++.+|...... ++....+
T Consensus 245 ~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~ 321 (384)
T cd08265 245 KEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATTV--PLHLEVLQ 321 (384)
T ss_pred HHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCCC--cccHHHHh
Confidence 99999988887532 22677788888776 899999999863 4678889999996 9999999654322 2232322
Q ss_pred hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627 311 LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 311 ~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li 348 (353)
+++.++.++.... ....+.+++++++++++++.+++
T Consensus 322 ~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~ 357 (384)
T cd08265 322 VRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKII 357 (384)
T ss_pred hCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHhe
Confidence 3466777765322 23569999999999999876544
No 58
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-37 Score=293.04 Aligned_cols=296 Identities=27% Similarity=0.388 Sum_probs=249.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|+|+++.+++++++++++|.|.++++||+||+.++++|++|+..+.+.. ++|.++|||++|+|+.+|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 7899999999889999999999999999999999999999998877643 5578999999999999999998899999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
+|++.+...|+.|++|..+.++.|...... |.. ..|+|++|+.++.+.++++|+++++.
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~ 139 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY--GEE-------------------LDGFFAEYAKVKVTSLVKVPPNVSDE 139 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccc--ccc-------------------cCceeeeeeecchhceEECCCCCCHH
Confidence 999998899999999999999999886542 211 12589999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
+++.+.+.+.++|+++.+. ++.++++|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++ ++.++++.
T Consensus 140 ~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-- 214 (334)
T PRK13771 140 GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-- 214 (334)
T ss_pred HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch--
Confidence 9999999999999998554 8999999999998 8999999999999999 888888999999998888 66666542
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCc--eecchhhhhcCcEEEeeecCCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--VAAHYGLFLSGRTLKGSLFGGWKP 326 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~ 326 (353)
.+.+.++++ +++|+++||+|+ ..+..++++++++ |+++.+|....... ..+... +.+++++.+... ..
T Consensus 215 --~~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~ 284 (334)
T PRK13771 215 --KFSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHIS---AT 284 (334)
T ss_pred --hHHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecC---CC
Confidence 455556554 379999999997 4678999999997 99999997644222 222333 456888887642 23
Q ss_pred CCcHHHHHHHHHcCCCCC
Q 018627 327 KTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 327 ~~~~~~~~~~l~~g~i~~ 344 (353)
++++++++++++++++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~ 302 (334)
T PRK13771 285 KRDVEEALKLVAEGKIKP 302 (334)
T ss_pred HHHHHHHHHHHHcCCCcc
Confidence 578999999999998864
No 59
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=8.7e-37 Score=288.26 Aligned_cols=298 Identities=32% Similarity=0.501 Sum_probs=251.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|||+++.+++. +.+.+.|.|.+.++||+|||.++++|+.|+..+.+.. .+|.++|+|++|+|+.+|+++..+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999988876 9999999999999999999999999999998877654 3478899999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
+|++.+...|+.|..|+.+.++.|..... .+.. ..|+|++|++++++ ++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~v~v~~~-~~~~p~~~~~~ 137 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV--LGVH-------------------RDGGFAEYIVVPAD-ALLVPEGLSLD 137 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe--eeec-------------------CCCcceeEEEechh-eEECCCCCCHH
Confidence 99999889999999999999999954322 1111 12589999999999 99999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~ 249 (353)
+++.+. .+.++++++ +..++.+|++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++. .
T Consensus 138 ~aa~~~-~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~--~ 212 (337)
T cd08261 138 QAALVE-PLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG--D 212 (337)
T ss_pred Hhhhhc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc--c
Confidence 998874 778888887 77889999999999889999999999999999 899998899999999999999999876 4
Q ss_pred ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCCC
Q 018627 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKPK 327 (353)
Q Consensus 250 ~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~ 327 (353)
.++.+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|...... .+....+. +++++.++.. ...
T Consensus 213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~ 286 (337)
T cd08261 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGPV--TFPDPEFHKKELTILGSRN---ATR 286 (337)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCCC--ccCHHHHHhCCCEEEEecc---CCh
Confidence 5677888877766 8999999998777889999999997 9999998765322 23333333 4778776532 234
Q ss_pred CcHHHHHHHHHcCCCCC
Q 018627 328 TDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~ 344 (353)
+.+.++++++++|++++
T Consensus 287 ~~~~~~~~l~~~~~i~~ 303 (337)
T cd08261 287 EDFPDVIDLLESGKVDP 303 (337)
T ss_pred hhHHHHHHHHHcCCCCh
Confidence 67899999999999987
No 60
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=5.1e-37 Score=289.78 Aligned_cols=301 Identities=27% Similarity=0.377 Sum_probs=248.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~ 90 (353)
|||+++.+++....+++.|.|+++++||+|||.++++|++|++.+.+.. ..|.++|||++|+|+++|+++..|++||+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~ 80 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKVGDR 80 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCCCCccCCcccceEEEEECCCCccCCCCCE
Confidence 7899999887744489999999999999999999999999998887754 34789999999999999999999999999
Q ss_pred EEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 91 VLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 91 V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
|++.+. ..|+.|..|..+..+.|..... .|.. . .|+|+||+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (338)
T PRK09422 81 VSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYT-V------------------DGGMAEQCIVTADYAVKVPEGLDPA 139 (338)
T ss_pred EEEccCCCCCCCChhhcCCCcccCCCccc--cCcc-c------------------cCcceeEEEEchHHeEeCCCCCCHH
Confidence 997554 5799999999999999976542 2222 1 2599999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
+++.++..+.|||+++ +.+++++|++|||+|+|++|++++++|+. +|+ +|+++.+++++.+.++++|++.++++..
T Consensus 140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~- 216 (338)
T PRK09422 140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR- 216 (338)
T ss_pred HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence 9999999999999997 77889999999999999999999999998 499 8999999999999999999988888752
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (353)
..++.+.+++..+ ++|.++.+.++...+..++++++.+ |+++.+|.......+ ....+ .++.++.++.... .
T Consensus 217 ~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~ 289 (338)
T PRK09422 217 VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESMDL--SIPRLVLDGIEVVGSLVGT---R 289 (338)
T ss_pred cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCcee--cHHHHhhcCcEEEEecCCC---H
Confidence 2456667776655 6885555555567899999999997 999999976432222 32222 4577777664332 4
Q ss_pred CcHHHHHHHHHcCCCCC
Q 018627 328 TDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~ 344 (353)
+++.++++++++|++++
T Consensus 290 ~~~~~~~~l~~~g~l~~ 306 (338)
T PRK09422 290 QDLEEAFQFGAEGKVVP 306 (338)
T ss_pred HHHHHHHHHHHhCCCCc
Confidence 67889999999998864
No 61
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=5.6e-37 Score=296.18 Aligned_cols=309 Identities=22% Similarity=0.291 Sum_probs=250.6
Q ss_pred ccceeeEEEEec--CC---CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-------------CCC-ccccc
Q 018627 9 QVITCKAAVAWG--AG---QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFP-RIFGH 69 (353)
Q Consensus 9 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-------------~~p-~~~G~ 69 (353)
+|.+|||+++.. .+ +.+++.++|.|.|+++||+||+.++++|++|.+...+.. ..| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 466899999954 44 349999999999999999999999999999987654421 123 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCcccee
Q 018627 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFS 149 (353)
Q Consensus 70 e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 149 (353)
|++|+|+++|+++..+++||+|++.+...|++|..|+.|+.+.|..... .|.. ...|+|+
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~------------------~~~g~~a 143 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI--WGYE------------------TNFGSFA 143 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc--cccc------------------CCCccce
Confidence 9999999999999999999999999999999999999999999965431 1211 0125999
Q ss_pred eeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHH--hccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 018627 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (353)
Q Consensus 150 ~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~--~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~ 226 (353)
||+.++++.++++|+++++++++.+.+.+.+||+++.. ..++.+|++|||+|+ |++|++++++|+++|+ +++++++
T Consensus 144 e~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~ 222 (398)
T TIGR01751 144 EFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVS 222 (398)
T ss_pred EEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcC
Confidence 99999999999999999999999999999999999754 467889999999998 9999999999999999 7788888
Q ss_pred ChhhHHHHHhCCCceEeCCCCCC--------------------ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhc
Q 018627 227 NPEKCEKAKAFGVTEFLNPNDNN--------------------EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCC 285 (353)
Q Consensus 227 ~~~~~~~~~~~G~~~~~~~~~~~--------------------~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~ 285 (353)
++++.+.++++|++.+++++..+ ..+.+.+.+++++ ++|++|||+|. ..+..++++++
T Consensus 223 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~ 301 (398)
T TIGR01751 223 SPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCR 301 (398)
T ss_pred CHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhc
Confidence 89999999999999998865210 1245566667765 89999999986 66888999999
Q ss_pred cCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627 286 DGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 286 ~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~ 344 (353)
++ |+++.+|..... ...++... +.++.++.++.... .+++.+++++++++++.+
T Consensus 302 ~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~ 356 (398)
T TIGR01751 302 RG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP 356 (398)
T ss_pred cC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc
Confidence 97 999999976542 12222222 24577777776544 346888999999998874
No 62
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=9.7e-37 Score=287.36 Aligned_cols=303 Identities=30% Similarity=0.460 Sum_probs=255.9
Q ss_pred eeEEEEecCCCC-eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627 13 CKAAVAWGAGQP-LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (353)
Q Consensus 13 ~~a~~~~~~~~~-l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v 87 (353)
||++++..++++ +.+++.|.|.+++++|+||+.++++|+.|...+.+.. ++|.++|+|++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 789999999987 6888999999999999999999999999998887754 35788999999999999999999999
Q ss_pred CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
||+|++.+..+|+.|..|..++.+.|...... |.. . .|+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~ 139 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP--GLG-I------------------DGGFAEYIVVPARALVPVPDGVP 139 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc--ccc-c------------------CCcceeeEEechHHeEECCCCCC
Confidence 99999999999999999999999999655432 211 1 25899999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~ 247 (353)
+++++.+..++.+||+++.+..+++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 140 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~- 217 (338)
T cd08254 140 FAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL- 217 (338)
T ss_pred HHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC-
Confidence 999999999999999998787889999999998879999999999999999 799999999999999999998888765
Q ss_pred CCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCC
Q 018627 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (353)
+..+.+.+ ....+ ++|+++||+|....+..++++++++ |+++.+|.......++.. ..+.++.++.+++.. .
T Consensus 218 -~~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~ 290 (338)
T cd08254 218 -DDSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLS-DLIARELRIIGSFGG---T 290 (338)
T ss_pred -CcCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCHH-HHhhCccEEEEeccC---C
Confidence 34555555 44444 8999999998777889999999997 999999875443333322 223458888876533 2
Q ss_pred CCcHHHHHHHHHcCCCCCC
Q 018627 327 KTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 327 ~~~~~~~~~~l~~g~i~~~ 345 (353)
.+.+..++++++++.|.+.
T Consensus 291 ~~~~~~~~~ll~~~~l~~~ 309 (338)
T cd08254 291 PEDLPEVLDLIAKGKLDPQ 309 (338)
T ss_pred HHHHHHHHHHHHcCCCccc
Confidence 4678899999999998764
No 63
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.1e-36 Score=288.06 Aligned_cols=305 Identities=29% Similarity=0.461 Sum_probs=253.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~ 90 (353)
|||+++.+.++ +++++.|.|+++++||+||+.++++|+.|+..+.+.+ .+|.++|+|++|+|+.+|+++..|++||+
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~ 79 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDR 79 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCCCCCcccCcceEEEEEEECCCCCcCCCCCE
Confidence 68999988876 9999999999999999999999999999998776643 45789999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (353)
Q Consensus 91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~ 170 (353)
|++++...|+.|.+|+.++...|.+... .|.. ..|+|++|+.+|++.++++|+++++++
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~~~~~~~~~lP~~~~~~~ 138 (343)
T cd08236 80 VAVNPLLPCGKCEYCKKGEYSLCSNYDY--IGSR-------------------RDGAFAEYVSVPARNLIKIPDHVDYEE 138 (343)
T ss_pred EEEcCCCCCCCChhHHCcChhhCCCcce--Eecc-------------------cCCcccceEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999988642 2211 125899999999999999999999999
Q ss_pred hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
++.+ ..+++||+++. ..++.++++|||+|+|.+|++++|+|+++|+++|+++.+++++.+.++++|++.+++++ ..
T Consensus 139 aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~--~~ 214 (343)
T cd08236 139 AAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK--EE 214 (343)
T ss_pred HHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc--cc
Confidence 9888 48899999984 77899999999998899999999999999994499998899999999999998888876 33
Q ss_pred cHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecc-h-hhhhcCcEEEeeecCCCC--
Q 018627 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLFLSGRTLKGSLFGGWK-- 325 (353)
Q Consensus 251 ~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~-- 325 (353)
. .+.+....++ ++|++|||+|....+..++++++++ |+++.+|.......+... . ..+.+++++.++......
T Consensus 215 ~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (343)
T cd08236 215 D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF 292 (343)
T ss_pred c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccccc
Confidence 4 5666666666 7999999998767789999999997 999999976543222211 1 123568888887653321
Q ss_pred CCCcHHHHHHHHHcCCCCCC
Q 018627 326 PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~~ 345 (353)
..+.+.++++++.++++.+.
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~ 312 (343)
T cd08236 293 PGDEWRTALDLLASGKIKVE 312 (343)
T ss_pred chhhHHHHHHHHHcCCCChH
Confidence 14578899999999998643
No 64
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.5e-36 Score=287.05 Aligned_cols=302 Identities=28% Similarity=0.413 Sum_probs=255.3
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCC----CCcccccceeEEEEEeCCCCCCCCC
Q 018627 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI----FPRIFGHEASGIVESVGPGVTEFNE 87 (353)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~----~p~~~G~e~~G~V~~vG~~~~~~~v 87 (353)
|||+++..++ ..+++++++.|.|.++||+||+.++++|++|...+.+... .|.++|+|++|+|+++|+++..+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899998876 3499999999999999999999999999999988877642 3668999999999999999999999
Q ss_pred CCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 88 GEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 88 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
||+|+..+. ..|+.|.+|+.++.++|...... |.. ..|+|++|+.++++.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~s~~~~~~~~~~~lp~~~ 139 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYT-------------------VDGTFAEYAIADARYVTPIPDGL 139 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCcccc--ccc-------------------cCCcceeEEEeccccEEECCCCC
Confidence 999998764 67999999999999999776432 211 12589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++++++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.++++
T Consensus 140 ~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~ 217 (341)
T cd08297 140 SFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDF 217 (341)
T ss_pred CHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcC
Confidence 999999999999999999855 58999999999998 6799999999999999 89999999999999999999998887
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (353)
. ..++.+.+.+.+++ ++|++||+.+....+..++++++++ |+++.+|.... ...++....+ .+++++.++....
T Consensus 218 ~--~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 293 (341)
T cd08297 218 K--KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVGT 293 (341)
T ss_pred C--CccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccCC
Confidence 6 44677788877765 8999999877767889999999997 99999997653 2223333333 4588888754332
Q ss_pred CCCCCcHHHHHHHHHcCCCCC
Q 018627 324 WKPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 324 ~~~~~~~~~~~~~l~~g~i~~ 344 (353)
.+++++++++++++++.+
T Consensus 294 ---~~~~~~~~~~~~~~~l~~ 311 (341)
T cd08297 294 ---RQDLQEALEFAARGKVKP 311 (341)
T ss_pred ---HHHHHHHHHHHHcCCCcc
Confidence 368999999999999865
No 65
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=8.4e-37 Score=288.73 Aligned_cols=295 Identities=25% Similarity=0.372 Sum_probs=238.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC--------------CCCCcccccceeEEEEEe
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------------AIFPRIFGHEASGIVESV 78 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~--------------~~~p~~~G~e~~G~V~~v 78 (353)
|||+++..+ +++++++|.|+++++||+||+.++++|++|+..+.|. ..+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 688998766 6999999999999999999999999999999888762 135789999999999999
Q ss_pred CCCCCC-CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627 79 GPGVTE-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (353)
Q Consensus 79 G~~~~~-~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~ 157 (353)
|+++++ +++||+|++++...|+.|..|..|+.+ . . .|+|+||++++.+
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~----------~---~------------------~g~~~~~~~v~~~ 127 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP----------E---A------------------PGGYAEYMLLSEA 127 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc----------C---C------------------CCceeeeEEechH
Confidence 999987 999999999999999999999433111 0 1 2589999999999
Q ss_pred ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (353)
Q Consensus 158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 237 (353)
.++++|+++++++++ +..++++||+++ ..+++++|++|||+|+|++|.+++|+|+.+|++.++++++++++.+.++++
T Consensus 128 ~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~ 205 (341)
T cd08262 128 LLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAM 205 (341)
T ss_pred HeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHc
Confidence 999999999999887 556889999985 778999999999998899999999999999996688888899999999999
Q ss_pred CCceEeCCCCCCc--cHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCc
Q 018627 238 GVTEFLNPNDNNE--PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR 314 (353)
Q Consensus 238 G~~~~~~~~~~~~--~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 314 (353)
|++.++++..... .+. .+.....+ ++|+++|++|++..+..++++++++ |+++.+|.......+.. ...+.+++
T Consensus 206 g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~-~~~~~~~~ 282 (341)
T cd08262 206 GADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEP-ALAIRKEL 282 (341)
T ss_pred CCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCH-HHHhhcce
Confidence 9988888753111 222 33444444 8999999998755778899999996 99999997643222221 12234677
Q ss_pred EEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627 315 TLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 315 ~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li 348 (353)
++.++... ..+++.++++++++|++++.+++
T Consensus 283 ~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i 313 (341)
T cd08262 283 TLQFSLGY---TPEEFADALDALAEGKVDVAPMV 313 (341)
T ss_pred EEEEEecc---cHHHHHHHHHHHHcCCCChHHhe
Confidence 77655432 23578999999999999876544
No 66
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=7.7e-37 Score=288.82 Aligned_cols=303 Identities=23% Similarity=0.362 Sum_probs=251.0
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (353)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd~ 90 (353)
|+++.++.+..+++++++.|++.++||+||++++++|++|+..+.+.. .+|.++|||++|+|+++|+++.++++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 578889888779999999999999999999999999999998887754 45889999999999999999999999999
Q ss_pred EE-eecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 91 VL-TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 91 V~-~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
|+ ......|++|.+|+.+..++|+......+|.. ..+ ....|+|+||+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~ 146 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKY-PDG-------------TITQGGYADHIVVDERFVFKIPEGLDSA 146 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccc-cCC-------------CcCCCcceeEEEechhheEECCCCCCHH
Confidence 97 45556899999999999999988654332211 000 0113599999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~ 249 (353)
+++.+.+.+.+||+++.+ ..+++|++++|.|+|++|++++++|+++|+ +|+++++++++.+.++++|++.+++.. .
T Consensus 147 ~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~--~ 222 (337)
T cd05283 147 AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK--D 222 (337)
T ss_pred HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc--c
Confidence 999999999999999744 568999999998889999999999999999 899999999999999999999888765 2
Q ss_pred ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCCC
Q 018627 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKT 328 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~ 328 (353)
.++.. . ..+++|++|||+|....+..++++++++ |+++.+|...... .++... +.+++++.++.... .+
T Consensus 223 ~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~~ 292 (337)
T cd05283 223 PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---RK 292 (337)
T ss_pred hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---HH
Confidence 22221 1 2348999999999865688999999997 9999999765432 333333 34699999887654 46
Q ss_pred cHHHHHHHHHcCCCCC
Q 018627 329 DLPSLVNRYLKKVRNT 344 (353)
Q Consensus 329 ~~~~~~~~l~~g~i~~ 344 (353)
++.++++++.++++++
T Consensus 293 ~~~~~~~~~~~~~l~~ 308 (337)
T cd05283 293 ETQEMLDFAAEHGIKP 308 (337)
T ss_pred HHHHHHHHHHhCCCcc
Confidence 8999999999998864
No 67
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.6e-36 Score=287.24 Aligned_cols=301 Identities=29% Similarity=0.454 Sum_probs=246.5
Q ss_pred EEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC----C--CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----A--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (353)
Q Consensus 15 a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~----~--~~p~~~G~e~~G~V~~vG~~~~~~~vG 88 (353)
|+++++++. +++++.|.|.+.++||+|||.++++|+.|++.+.+. . .+|.++|+|++|+|+++|+++.++++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467788865 999999999999999999999999999998865321 1 357789999999999999999999999
Q ss_pred CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (353)
Q Consensus 89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~ 168 (353)
|+|++.+..+|++|..|+.|++++|+..... +.... .|+|++|++++++.++++|+++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~~ 139 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPV------------------DGTLCRYVNHPADFCHKLPDNVSL 139 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccC------------------CCceeeeEEecHHHcEECcCCCCH
Confidence 9999999999999999999999999764321 10001 258999999999999999999999
Q ss_pred hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
++++.+ .++.+|++++ +.+++++|++|||+|+|++|++++|+|+++|++.|+++.+++++.+.++++|++.+++++
T Consensus 140 ~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~-- 215 (343)
T cd05285 140 EEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVR-- 215 (343)
T ss_pred HHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccc--
Confidence 999877 4888999986 788999999999998899999999999999994489998999999999999999998876
Q ss_pred Ccc---HHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627 249 NEP---VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (353)
Q Consensus 249 ~~~---~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (353)
..+ +.+.+.+.+++ ++|++|||+|....+...+++++++ |+++.+|.......+++. ...++++.+.++...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 291 (343)
T cd05285 216 TEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY-- 291 (343)
T ss_pred cccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC--
Confidence 333 36667776666 8999999999755788999999997 999999865443222222 123457777765432
Q ss_pred CCCCcHHHHHHHHHcCCCCCCC
Q 018627 325 KPKTDLPSLVNRYLKKVRNTRK 346 (353)
Q Consensus 325 ~~~~~~~~~~~~l~~g~i~~~~ 346 (353)
.+.+.++++++.++++.+.+
T Consensus 292 --~~~~~~~~~~l~~~~l~~~~ 311 (343)
T cd05285 292 --ANTYPTAIELLASGKVDVKP 311 (343)
T ss_pred --hHHHHHHHHHHHcCCCCchH
Confidence 26788999999999876443
No 68
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.6e-36 Score=285.58 Aligned_cols=306 Identities=30% Similarity=0.395 Sum_probs=249.4
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++.+++..+++.+.|.|.|+++||+||+.++++|+.|+..+.+. ..+|.++|+|++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 689999988877999999999999999999999999999998874332 24577899999999999999998999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++.+...|+.|..|..+++++|... .++|.. . .|+|++|++++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~------------------~g~~~~~v~v~~~~~~~lP~~~ 139 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNT--KILGVD-T------------------DGCFAEYVVVPEENLWKNDKDI 139 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCccc--ceEecc-C------------------CCcceEEEEechHHcEECcCCC
Confidence 999999999999999999999999999753 233322 1 2589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
+++++ .+...+.++++++. ....+|++|||+|+|.+|++++|+|+++|+.+|+++++++++.+.++++|+++++++.
T Consensus 140 ~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (341)
T cd05281 140 PPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR 216 (341)
T ss_pred CHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc
Confidence 98555 45558888888764 4567899999988899999999999999986688888899999999999998888765
Q ss_pred CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (353)
..++. .+++..++ ++|++|||+|........+++++++ |+++.+|.......+++....+++++.+.+.....
T Consensus 217 --~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 290 (341)
T cd05281 217 --EEDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK-- 290 (341)
T ss_pred --cccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC--
Confidence 44566 67776665 9999999998877788999999997 99999987654333333332345677777665222
Q ss_pred CCCcHHHHHHHHHcCCCCCCCCc
Q 018627 326 PKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~~~li 348 (353)
..+.+.+++++++++++++.+++
T Consensus 291 ~~~~~~~~~~~l~~~~l~~~~~~ 313 (341)
T cd05281 291 MFETWYQVSALLKSGKVDLSPVI 313 (341)
T ss_pred cchhHHHHHHHHHcCCCChhHhe
Confidence 23568889999999998765543
No 69
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.2e-36 Score=285.82 Aligned_cols=277 Identities=21% Similarity=0.241 Sum_probs=227.2
Q ss_pred eeEEEEecCCC-----CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC
Q 018627 13 CKAAVAWGAGQ-----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (353)
Q Consensus 13 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~ 83 (353)
|||+++.+++. .++++++|.|.|+++||+||+.++++|++|++.+.|.+ .+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 68999998875 38889999999999999999999999999999887754 3578999999999999999998
Q ss_pred C-CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC
Q 018627 84 E-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (353)
Q Consensus 84 ~-~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i 162 (353)
+ |++||+|++.+. . .|+|+||+.+|++.++++
T Consensus 81 ~~~~vGd~V~~~~~-----------------------------~------------------~g~~a~~~~v~~~~~~~i 113 (324)
T cd08291 81 AQSLIGKRVAFLAG-----------------------------S------------------YGTYAEYAVADAQQCLPL 113 (324)
T ss_pred ccCCCCCEEEecCC-----------------------------C------------------CCcchheeeecHHHeEEC
Confidence 6 999999987621 0 148999999999999999
Q ss_pred CCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE-cC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc
Q 018627 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240 (353)
Q Consensus 163 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~-Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~ 240 (353)
|+++++++++.+.+.+.|||.++ +.... ++++++|+ ++ |++|++++|+|+++|+ +|+++++++++.+.++++|++
T Consensus 114 P~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~ 190 (324)
T cd08291 114 PDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAE 190 (324)
T ss_pred CCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCc
Confidence 99999999998888889997554 55555 56667776 55 9999999999999999 899999999999999999999
Q ss_pred eEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEe
Q 018627 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKG 318 (353)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g 318 (353)
+++++. ..++.+.+++.+++ ++|++||++|+. .....+.+++++ |+++.+|.........++... +.+++++.+
T Consensus 191 ~~i~~~--~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08291 191 YVLNSS--DPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEG 266 (324)
T ss_pred EEEECC--CccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEE
Confidence 999876 56788888888776 899999999984 467789999997 999999975442221232222 456999999
Q ss_pred eecCCCCC---CCcHHHHHHHHHcCCCCC
Q 018627 319 SLFGGWKP---KTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 319 ~~~~~~~~---~~~~~~~~~~l~~g~i~~ 344 (353)
+....+.. .+++.+++++++ +++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 294 (324)
T cd08291 267 FWLTTWLQKLGPEVVKKLKKLVK-TELKT 294 (324)
T ss_pred EEHHHhhcccCHHHHHHHHHHHh-Ccccc
Confidence 88766532 346788888887 76653
No 70
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.3e-36 Score=283.82 Aligned_cols=291 Identities=29% Similarity=0.353 Sum_probs=238.7
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
||++++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+.+|+++..+++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGD 80 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCCCCCCCeecccceeEEEEEECCCCCCCCCCC
Confidence 6899987766 458999999999999999999999999999998876532 4578999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
+|++.+...|+.|+.|+.|..++|.+... .|.. ..|+|++|++++++.++++|++++++
T Consensus 81 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (325)
T cd08264 81 RVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVV-------------------SNGGYAEYIVVPEKNLFKIPDSISDE 139 (325)
T ss_pred EEEECCCcCCCCChhhcCCCccccCccce--eecc-------------------CCCceeeEEEcCHHHceeCCCCCCHH
Confidence 99999989999999999999999987543 2221 12589999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
+++.+++.+.+||+++.. .++++|++|+|+|+ |++|++++++|+++|+ +|+++.+ .+.++++|++++++..
T Consensus 140 ~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~-- 211 (325)
T cd08264 140 LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD-- 211 (325)
T ss_pred HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch--
Confidence 999999999999999854 88999999999998 9999999999999999 7877752 3666789998888754
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKPK 327 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~ 327 (353)
+..+.+++++ +++|+++|++|. ..+..++++++++ |+++.+|.... ....++...+. ++.++.++..+. +
T Consensus 212 --~~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (325)
T cd08264 212 --EVEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG-GEVKLDLSDLYSKQISIIGSTGGT---R 282 (325)
T ss_pred --HHHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCC-CCCccCHHHHhhcCcEEEEccCCC---H
Confidence 1245566555 689999999997 6789999999997 99999987522 22333333333 477787765443 4
Q ss_pred CcHHHHHHHHHcCC
Q 018627 328 TDLPSLVNRYLKKV 341 (353)
Q Consensus 328 ~~~~~~~~~l~~g~ 341 (353)
+++.++++++...+
T Consensus 283 ~~~~~~~~l~~~~~ 296 (325)
T cd08264 283 KELLELVKIAKDLK 296 (325)
T ss_pred HHHHHHHHHHHcCC
Confidence 67888998886444
No 71
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=7.8e-36 Score=280.37 Aligned_cols=297 Identities=31% Similarity=0.476 Sum_probs=247.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|+|+++..+++++.++++|.|++.+++|+||+.++++|++|++.+.|.. ..|.++|+|++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 6899998766669999999999999999999999999999999887753 4568999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
+|++++...|+.|.+|+.+.++.|++.. ..|.. ..|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~~ 139 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA--EYGEE-------------------VDGGFAEYVKVPERSLVKLPDNVSDE 139 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc--ccccc-------------------cCCeeeeEEEechhheEECCCCCCHH
Confidence 9999999999999999999999998752 23322 12589999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
+++.+++++.+||+++.. .++.+++++||+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++..
T Consensus 140 ~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-- 215 (332)
T cd08259 140 SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS-- 215 (332)
T ss_pred HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH--
Confidence 999999999999999866 88999999999997 9999999999999999 888888888999999889987777653
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCc-eecchhhhhcCcEEEeeecCCCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLFLSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (353)
. +.+.+.+.. ++|++++++|. .....+++.++++ |+++.+|....... +..... .+++..+.++.. ...
T Consensus 216 -~-~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~ 285 (332)
T cd08259 216 -K-FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLL-ILKEIRIIGSIS---ATK 285 (332)
T ss_pred -H-HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHH-HhCCcEEEEecC---CCH
Confidence 2 555555433 79999999987 4578889999996 99999987644222 122222 245777776642 224
Q ss_pred CcHHHHHHHHHcCCCCC
Q 018627 328 TDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~ 344 (353)
.++.++++++.+|.+.+
T Consensus 286 ~~~~~~~~~~~~~~l~~ 302 (332)
T cd08259 286 ADVEEALKLVKEGKIKP 302 (332)
T ss_pred HHHHHHHHHHHcCCCcc
Confidence 67889999999998764
No 72
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.8e-35 Score=278.70 Aligned_cols=303 Identities=31% Similarity=0.431 Sum_probs=252.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (353)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~ 90 (353)
|||+++.++++ +++.+.|.|+++++||+||+.++++|+.|+..+.|.. .+|.++|+|++|+|+.+|+++.++++||+
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~ 79 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDR 79 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 68999998886 9999999999999999999999999999999887765 46789999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (353)
Q Consensus 91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~ 170 (353)
|++.+...|++|..|..++.+.|..... .|.. . .|+|++|+.++.+.++++|+++++.+
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~lP~~~~~~~ 138 (334)
T cd08234 80 VAVDPNIYCGECFYCRRGRPNLCENLTA--VGVT-R------------------NGGFAEYVVVPAKQVYKIPDNLSFEE 138 (334)
T ss_pred EEEcCCcCCCCCccccCcChhhCCCcce--eccC-C------------------CCcceeEEEecHHHcEECcCCCCHHH
Confidence 9998888899999999999999987653 1111 1 24899999999999999999999999
Q ss_pred hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
++.+ ..+.++++++ +.+++.+|++|||+|+|.+|++++++|++.|+++|+++.+++++.+.++++|++.++++. ..
T Consensus 139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~ 214 (334)
T cd08234 139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS--RE 214 (334)
T ss_pred Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC--CC
Confidence 9876 6888999987 778999999999998899999999999999995488898999999999999998888775 33
Q ss_pred cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCCCCc
Q 018627 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKPKTD 329 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~ 329 (353)
++... +...++++|++|||++....+...+++++++ |+++.+|.........+....++ +++++.+.... .+.
T Consensus 215 ~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 288 (334)
T cd08234 215 DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYT 288 (334)
T ss_pred CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHH
Confidence 44434 3333348999999998767888999999997 99999987654233344444333 57888776532 356
Q ss_pred HHHHHHHHHcCCCCCCCC
Q 018627 330 LPSLVNRYLKKVRNTRKP 347 (353)
Q Consensus 330 ~~~~~~~l~~g~i~~~~l 347 (353)
+++++++++++++.+.++
T Consensus 289 ~~~~~~~~~~~~l~~~~~ 306 (334)
T cd08234 289 FPRAIALLESGKIDVKGL 306 (334)
T ss_pred HHHHHHHHHcCCCChhhh
Confidence 889999999999876543
No 73
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=3.1e-36 Score=264.02 Aligned_cols=282 Identities=23% Similarity=0.328 Sum_probs=232.2
Q ss_pred ccceeeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCC
Q 018627 9 QVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG 81 (353)
Q Consensus 9 ~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~ 81 (353)
++...|++++...+.| ++++..++|.....+|+||..|+.|||+|+..++|.+ ++|.+-|+|++|+|+.+|++
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~ 95 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN 95 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence 5567899999888877 8899999999888889999999999999999999998 67889999999999999999
Q ss_pred CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (353)
Q Consensus 82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~ 161 (353)
+..|++||+|+.... +.|.|++|.+.+++.+++
T Consensus 96 vkgfk~Gd~VIp~~a-----------------------------------------------~lGtW~t~~v~~e~~Li~ 128 (354)
T KOG0025|consen 96 VKGFKPGDWVIPLSA-----------------------------------------------NLGTWRTEAVFSESDLIK 128 (354)
T ss_pred cCccCCCCeEeecCC-----------------------------------------------CCccceeeEeecccceEE
Confidence 999999999998732 236999999999999999
Q ss_pred CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH----HHHh
Q 018627 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKA 236 (353)
Q Consensus 162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~ 236 (353)
+++.++++.||.+.++-+|||++|.+..++.+||+|+-.|+ +++|++++|+|+++|+++|-++ |+....+ .++.
T Consensus 129 vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~ 207 (354)
T KOG0025|consen 129 VDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKS 207 (354)
T ss_pred cCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999988898 8999999999999999666555 5554444 4466
Q ss_pred CCCceEeCCCCCCccHHH-HHHHH-hcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-Cceecchhhhhc
Q 018627 237 FGVTEFLNPNDNNEPVQQ-VIKRI-TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLS 312 (353)
Q Consensus 237 ~G~~~~~~~~~~~~~~~~-~~~~~-~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 312 (353)
+||++++... .+.. ..... ... .+.+.|||+|+.. .....+.|.++ |.++.+|....+ ..++.+++ +|+
T Consensus 208 lGA~~ViTee----el~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~l-IFK 280 (354)
T KOG0025|consen 208 LGATEVITEE----ELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMSKQPVTVPTSLL-IFK 280 (354)
T ss_pred cCCceEecHH----HhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCccCCCcccccchh-eec
Confidence 9999988532 2221 11111 222 7899999999954 45666889997 999999987653 23444444 588
Q ss_pred CcEEEeeecCCCCCC--------CcHHHHHHHHHcCCCCCC
Q 018627 313 GRTLKGSLFGGWKPK--------TDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 313 ~~~i~g~~~~~~~~~--------~~~~~~~~~l~~g~i~~~ 345 (353)
+++++|+|...|... +.+.++..|+.+|+|.-.
T Consensus 281 dl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~ 321 (354)
T KOG0025|consen 281 DLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP 321 (354)
T ss_pred cceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc
Confidence 999999999999843 346688999999998743
No 74
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=2.2e-35 Score=277.68 Aligned_cols=302 Identities=25% Similarity=0.388 Sum_probs=251.6
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++...+. .+++.+.+.|.+.+++|+||+.++++|++|++.+.|.. .+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 68999884433 38888888888999999999999999999998887754 3478999999999999999998999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++.+...|++|.+|..+.++.|.+... .|.. ..|+|++|++++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-------------------~~g~~~~~~~~~~~~~~~~p~~~ 139 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEH-------------------VDGGYAEYVAVPARNLLPIPDNL 139 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc--cccc-------------------cCcceeEEEEechHHceeCCCCC
Confidence 99999999999999999999999999986432 2211 12589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++++++.++..+.++++++.+..++.+++++||+|+ +.+|++++++++..|+ +++.+++++++.+.+++++.+.+++.
T Consensus 140 ~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 218 (342)
T cd08266 140 SFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY 218 (342)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec
Confidence 999999999999999999878888999999999998 7899999999999999 88999899999999988888777765
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hhhhcCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~ 323 (353)
. ..++.+.+...+.+ ++|++++++|. ..+..++++++++ |+++.+|..... ...+.. ..+.+++++.+.....
T Consensus 219 ~--~~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
T cd08266 219 R--KEDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT 293 (342)
T ss_pred C--ChHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC
Confidence 4 44566666666655 89999999987 5678899999997 999999876542 223333 2245688888776443
Q ss_pred CCCCCcHHHHHHHHHcCCCCC
Q 018627 324 WKPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 324 ~~~~~~~~~~~~~l~~g~i~~ 344 (353)
..++.+++++++++.+.+
T Consensus 294 ---~~~~~~~~~~l~~~~l~~ 311 (342)
T cd08266 294 ---KAELDEALRLVFRGKLKP 311 (342)
T ss_pred ---HHHHHHHHHHHHcCCccc
Confidence 357889999999998764
No 75
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.1e-35 Score=279.39 Aligned_cols=279 Identities=20% Similarity=0.231 Sum_probs=224.5
Q ss_pred eeeEEEEecC--CCC----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCC
Q 018627 12 TCKAAVAWGA--GQP----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEF 85 (353)
Q Consensus 12 ~~~a~~~~~~--~~~----l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~ 85 (353)
+|+||++.+. +++ +++++.|.|+|+++||||||.+++||+.|........++|.++|+|++|+|++ .++.|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~~~~~p~v~G~e~~G~V~~---~~~~~ 78 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKRLNEGDTMIGTQVAKVIES---KNSKF 78 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccccCCCCCcEecceEEEEEec---CCCCC
Confidence 6899999883 333 89999999999999999999999999987653222124688999999999995 34679
Q ss_pred CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC---ceEEC
Q 018627 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG---CAVKV 162 (353)
Q Consensus 86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~---~v~~i 162 (353)
++||||++. ++|++|+.++.+ .++++
T Consensus 79 ~~Gd~V~~~---------------------------------------------------~~~~~~~~~~~~~~~~~~~i 107 (329)
T cd08294 79 PVGTIVVAS---------------------------------------------------FGWRTHTVSDGKDQPDLYKL 107 (329)
T ss_pred CCCCEEEee---------------------------------------------------CCeeeEEEECCccccceEEC
Confidence 999999875 379999999999 99999
Q ss_pred CCCCC--h---hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627 163 SSIAP--L---EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (353)
Q Consensus 163 P~~l~--~---~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 236 (353)
|++++ + .+++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++.+++++.+.+++
T Consensus 108 P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 108 PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKE 186 (329)
T ss_pred CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 99988 2 2334677899999999988889999999999986 9999999999999999 89999999999999999
Q ss_pred CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC--ce---e-cchhhh
Q 018627 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EV---A-AHYGLF 310 (353)
Q Consensus 237 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~---~-~~~~~~ 310 (353)
+|+++++++. ..++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... .. . +....+
T Consensus 187 ~Ga~~vi~~~--~~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T cd08294 187 LGFDAVFNYK--TVSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETII 262 (329)
T ss_pred cCCCEEEeCC--CccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHh
Confidence 9999999886 5677788877766689999999998 6789999999997 9999998532211 11 1 112223
Q ss_pred hcCcEEEeeecCCCC--CCCcHHHHHHHHHcCCCCCCCCcc
Q 018627 311 LSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 311 ~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~g~i~~~~li~ 349 (353)
++++++.+++...+. ..+.+.++++++++|++++....+
T Consensus 263 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~ 303 (329)
T cd08294 263 FKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVT 303 (329)
T ss_pred hhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccc
Confidence 568888887654431 123467889999999998765543
No 76
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.3e-35 Score=280.38 Aligned_cols=300 Identities=28% Similarity=0.436 Sum_probs=240.3
Q ss_pred EEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhc-cCC-----CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627 17 VAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (353)
Q Consensus 17 ~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~ 90 (353)
+++++++ +++++.|.|.++++||+||+.++++|++|+..+. +.. .+|.++|+|++|+|+++|+++.+|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 5677776 9999999999999999999999999999987653 321 35779999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (353)
Q Consensus 91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~ 170 (353)
|++.+...|++|.+|..|+.+.|..... .+....+. ...|+|++|+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~--------------~~~g~~~~~v~v~~~~~~~iP~~~~~~~ 144 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF--LGSAMRFP--------------HVQGGFREYLVVDASQCVPLPDGLSLRR 144 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc--eeeccccC--------------CCCCceeeEEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999998532 11100000 0125999999999999999999999999
Q ss_pred hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
|+. ..+++++|+++.+.... ++++|||.|+|.+|++++|+|+++|+++++++++++++.++++++|++++++++. .
T Consensus 145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~ 220 (339)
T cd08232 145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--D 220 (339)
T ss_pred hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--h
Confidence 876 45888999998665556 9999999888999999999999999867899989999999999999988888752 2
Q ss_pred cHHHHHHHHh-c-CCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCC
Q 018627 251 PVQQVIKRIT-D-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPK 327 (353)
Q Consensus 251 ~~~~~~~~~~-~-~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~ 327 (353)
++ +... . +++|++||++|+...+...+++++++ |+++.+|..... ....... +.+++++.+.... .
T Consensus 221 ~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~ 289 (339)
T cd08232 221 PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFRF----D 289 (339)
T ss_pred hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEecC----H
Confidence 22 2222 2 36999999999766788999999997 999999865422 2223222 3467888776522 3
Q ss_pred CcHHHHHHHHHcCCCCCCCCc
Q 018627 328 TDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 328 ~~~~~~~~~l~~g~i~~~~li 348 (353)
+++.++++++.+|++++.+++
T Consensus 290 ~~~~~~~~~~~~~~i~~~~~~ 310 (339)
T cd08232 290 DEFAEAVRLLAAGRIDVRPLI 310 (339)
T ss_pred HHHHHHHHHHHcCCCCchhhe
Confidence 578899999999998765543
No 77
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.6e-35 Score=277.52 Aligned_cols=278 Identities=22% Similarity=0.289 Sum_probs=234.3
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627 13 CKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (353)
Q Consensus 13 ~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~ 85 (353)
|||+++.+++.+ ++++++|.|.+.++||+|||.++++|++|+..+.|.. ..|.++|||++|+|+++|+++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999887653 8899999999999999999999999999998887754 346899999999999999999999
Q ss_pred CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
++||+|++.+. .|+|++|+++++..++++|++
T Consensus 81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~ip~~ 112 (324)
T cd08292 81 QVGQRVAVAPV------------------------------------------------HGTWAEYFVAPADGLVPLPDG 112 (324)
T ss_pred CCCCEEEeccC------------------------------------------------CCcceeEEEEchHHeEECCCC
Confidence 99999998621 148999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
+++++++.+++.+.++|+++ +..++++|++|||+|+ |.+|++++|+|+++|+ +++++.+++++.+.++++|++++++
T Consensus 113 ~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (324)
T cd08292 113 ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVS 190 (324)
T ss_pred CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEc
Confidence 99999999988889999987 5578999999999987 9999999999999999 7888888888888888899988887
Q ss_pred CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecC
Q 018627 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG 322 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 322 (353)
+. +.++.+.+.+++++ ++|++|||+|+ .....++++++++ |+++.+|.... ..+.+.... +.+++++.++...
T Consensus 191 ~~--~~~~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08292 191 TE--QPGWQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMSG-EPMQISSGDLIFKQATVRGFWGG 265 (324)
T ss_pred CC--CchHHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCCC-CCCcCCHHHHhhCCCEEEEEEcH
Confidence 76 56778888888877 99999999998 4678899999997 99999997533 223333322 3568999888765
Q ss_pred CCCC-------CCcHHHHHHHHHcCCCCCC
Q 018627 323 GWKP-------KTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 323 ~~~~-------~~~~~~~~~~l~~g~i~~~ 345 (353)
.+.. .+.+.++++++.+|++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~ 295 (324)
T cd08292 266 RWSQEMSVEYRKRMIAELLTLALKGQLLLP 295 (324)
T ss_pred HhhhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence 4321 2467889999999998753
No 78
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.7e-35 Score=278.20 Aligned_cols=268 Identities=17% Similarity=0.222 Sum_probs=216.9
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcc
Q 018627 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQ 104 (353)
Q Consensus 25 l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~ 104 (353)
+++.+.|.|+|++|||||||.++++|+.+..-.......|.++|.|++|+|+++|+ .|++||||++.
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRVAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhcccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe----------
Confidence 99999999999999999999999999976543222124578999999999999874 59999999875
Q ss_pred cccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC----CCCCChhhh-hhhchhhh
Q 018627 105 CKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV----SSIAPLEKI-CLLSCGLS 179 (353)
Q Consensus 105 c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i----P~~l~~~~a-a~l~~~~~ 179 (353)
++|++|+.++.+.+.++ |++++++++ +.+++++.
T Consensus 86 -----------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~ 124 (325)
T TIGR02825 86 -----------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGL 124 (325)
T ss_pred -----------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHH
Confidence 26999999999888877 999999997 67888999
Q ss_pred HHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHH
Q 018627 180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (353)
Q Consensus 180 ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 258 (353)
|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++.+++++.+.++++|++.++++++ ...+.+.++.
T Consensus 125 TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~ 202 (325)
T TIGR02825 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT-VKSLEETLKK 202 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc-cccHHHHHHH
Confidence 99999888899999999999996 9999999999999999 8999999999999999999999998863 2356666666
Q ss_pred HhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC---Ccee---cchhhhhcCcEEEeeecCCCCC---CCc
Q 018627 259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVA---AHYGLFLSGRTLKGSLFGGWKP---KTD 329 (353)
Q Consensus 259 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~---~~~~~~~~~~~i~g~~~~~~~~---~~~ 329 (353)
..++++|++||++|+ ..+..++++++++ |+++.+|..... ...+ .....+++++++.++....+.. .+.
T Consensus 203 ~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (325)
T TIGR02825 203 ASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKA 280 (325)
T ss_pred hCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHH
Confidence 555589999999997 4678999999997 999999975321 1111 1122234688888876544322 246
Q ss_pred HHHHHHHHHcCCCCCCCCccC
Q 018627 330 LPSLVNRYLKKVRNTRKPSCG 350 (353)
Q Consensus 330 ~~~~~~~l~~g~i~~~~li~~ 350 (353)
+.++++++++|++++....++
T Consensus 281 ~~~~~~l~~~g~l~~~~~~~~ 301 (325)
T TIGR02825 281 LKELLKWVLEGKIQYKEYVIE 301 (325)
T ss_pred HHHHHHHHHCCCcccceeccc
Confidence 889999999999988755543
No 79
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.3e-35 Score=278.96 Aligned_cols=299 Identities=28% Similarity=0.384 Sum_probs=244.2
Q ss_pred ecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCCCCCCCeEE
Q 018627 19 WGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFNEGEHVL 92 (353)
Q Consensus 19 ~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~ 92 (353)
+.++.++++++.|.|.|+++||+||+.++++|++|+..+.+. ..+|.++|+|++|+|+++|+++.++++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 567778999999999999999999999999999998875432 14577899999999999999999999999999
Q ss_pred eecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhh
Q 018627 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 172 (353)
Q Consensus 93 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa 172 (353)
+.+...|+.|..|..+.+..|..... .|.. . .|+|++|++++++.++++|+++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~~~a~ 143 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI--FGVD-T------------------DGCFAEYAVVPAQNIWKNPKSIPPEYAT 143 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce--Eeec-C------------------CCcceeEEEeehHHcEECcCCCChHhhh
Confidence 99999999999999999999988643 2221 1 2589999999999999999999986654
Q ss_pred hhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccH
Q 018627 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (353)
Q Consensus 173 ~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 252 (353)
++.++.++++++ .....+|+++||.|+|++|.+++|+|+++|++.|+++++++++.+.++++|++.++++. ..++
T Consensus 144 -~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~--~~~~ 218 (340)
T TIGR00692 144 -IQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPF--KEDV 218 (340)
T ss_pred -hcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEccc--ccCH
Confidence 566888999876 34577899999988899999999999999995588888889999999999998888775 4667
Q ss_pred HHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCcHH
Q 018627 253 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP 331 (353)
Q Consensus 253 ~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 331 (353)
.+.+.++.++ ++|++|||+|+...+...+++++++ |+++.+|.......+++....+++++++.+.... ...+.+.
T Consensus 219 ~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 295 (340)
T TIGR00692 219 VKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGR--HMFETWY 295 (340)
T ss_pred HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEecC--CchhhHH
Confidence 7888777665 8999999998777888999999997 9999999764323333222223457777665421 1235678
Q ss_pred HHHHHHHcCCCCCCC
Q 018627 332 SLVNRYLKKVRNTRK 346 (353)
Q Consensus 332 ~~~~~l~~g~i~~~~ 346 (353)
+++++++++++++.+
T Consensus 296 ~~~~~l~~~~l~~~~ 310 (340)
T TIGR00692 296 TVSRLIQSGKLDLDP 310 (340)
T ss_pred HHHHHHHcCCCChHH
Confidence 899999999987544
No 80
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-35 Score=278.80 Aligned_cols=282 Identities=20% Similarity=0.247 Sum_probs=224.4
Q ss_pred ccceeeEEEEec-CCC-----CeEEEEe---ecCC-CCCCeEEEEEeeeecchhhhhhhcc---CCCCCccccc--ceeE
Q 018627 9 QVITCKAAVAWG-AGQ-----PLVVEEV---EVNP-PQPEEIRIKVVCTSLCRSDITAWET---QAIFPRIFGH--EASG 73 (353)
Q Consensus 9 ~~~~~~a~~~~~-~~~-----~l~~~~~---~~p~-~~~~eVlVrv~~~~i~~~D~~~~~g---~~~~p~~~G~--e~~G 73 (353)
.+.++|.|++.+ +.. .|++.+. +.|. +++|||||||.++++|+.|.....+ ...+|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 344678888854 322 1777774 5553 5899999999999999998764322 1146889998 8899
Q ss_pred EEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEE
Q 018627 74 IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTV 153 (353)
Q Consensus 74 ~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~ 153 (353)
+|+.+|+++++|++||+|+++ |+|+||..
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------~~~aey~~ 113 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI---------------------------------------------------TGWEEYSL 113 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec---------------------------------------------------CCcEEEEE
Confidence 999999999999999999865 48999999
Q ss_pred EeCCc--eEE--CCCCCChh-hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627 154 VHSGC--AVK--VSSIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (353)
Q Consensus 154 ~~~~~--v~~--iP~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~ 227 (353)
++.+. +++ +|++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|++++++
T Consensus 114 v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~ 192 (348)
T PLN03154 114 IRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS 192 (348)
T ss_pred EeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCC
Confidence 98753 544 59999987 688999999999999988888999999999998 9999999999999999 89999999
Q ss_pred hhhHHHHH-hCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC-ce--
Q 018627 228 PEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP-EV-- 303 (353)
Q Consensus 228 ~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~-- 303 (353)
+++.+.++ ++|++.++++++ ..++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... ..
T Consensus 193 ~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~ 269 (348)
T PLN03154 193 SQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQ 269 (348)
T ss_pred HHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCC
Confidence 99999987 799999998752 2367777777766689999999997 5789999999997 9999999764321 10
Q ss_pred -ecchh-hhhcCcEEEeeecCCCC--CCCcHHHHHHHHHcCCCCCC
Q 018627 304 -AAHYG-LFLSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 304 -~~~~~-~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~g~i~~~ 345 (353)
..... .+.+++++.|++.+.+. ..+.+.++++++++|++++.
T Consensus 270 ~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~ 315 (348)
T PLN03154 270 GIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI 315 (348)
T ss_pred CcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc
Confidence 11222 23568999988765432 12467889999999999863
No 81
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.8e-35 Score=279.65 Aligned_cols=281 Identities=20% Similarity=0.236 Sum_probs=225.4
Q ss_pred eeeEEEEecCCC-CeEEEEeec----CCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccce--eEEEEEeCC
Q 018627 12 TCKAAVAWGAGQ-PLVVEEVEV----NPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEA--SGIVESVGP 80 (353)
Q Consensus 12 ~~~a~~~~~~~~-~l~~~~~~~----p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~--~G~V~~vG~ 80 (353)
-+|+|....+.. .|++++.|. |+|++|||||||++++||+.|+..+.|.. .+|+++|++. .|++..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 356666434433 399999987 88999999999999999999998887742 4578899754 456666788
Q ss_pred CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeC-Cce
Q 018627 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA 159 (353)
Q Consensus 81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~~v 159 (353)
++..|++||+|+++ |+|+||+++|+ ..+
T Consensus 87 ~v~~~~vGd~V~~~---------------------------------------------------g~~aey~~v~~~~~~ 115 (338)
T cd08295 87 GNPDFKVGDLVWGF---------------------------------------------------TGWEEYSLIPRGQDL 115 (338)
T ss_pred CCCCCCCCCEEEec---------------------------------------------------CCceeEEEecchhce
Confidence 88899999999865 48999999999 799
Q ss_pred EECC-CCCChh-hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627 160 VKVS-SIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (353)
Q Consensus 160 ~~iP-~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 236 (353)
+++| ++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++.+++++.+.+++
T Consensus 116 ~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~ 194 (338)
T cd08295 116 RKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKN 194 (338)
T ss_pred eecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 9995 678887 799999999999999988889999999999997 9999999999999999 89999899999999988
Q ss_pred -CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCc------eecchhh
Q 018627 237 -FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE------VAAHYGL 309 (353)
Q Consensus 237 -~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~------~~~~~~~ 309 (353)
+|+++++++.+ +.++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|....... .++ ...
T Consensus 195 ~lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~-~~~ 270 (338)
T cd08295 195 KLGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNL-LNI 270 (338)
T ss_pred hcCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCH-HHH
Confidence 99999988652 3467777777665689999999997 6789999999997 99999997543211 111 222
Q ss_pred hhcCcEEEeeecCCCCC--CCcHHHHHHHHHcCCCCCCCCc
Q 018627 310 FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 310 ~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~g~i~~~~li 348 (353)
+++++++.++....+.. .+.+.++++++.+|++++....
T Consensus 271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~ 311 (338)
T cd08295 271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDI 311 (338)
T ss_pred hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeec
Confidence 35688888866544321 2347788999999999875433
No 82
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6e-35 Score=274.65 Aligned_cols=293 Identities=27% Similarity=0.385 Sum_probs=243.7
Q ss_pred eeEEEEecCCC----CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCC
Q 018627 13 CKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (353)
Q Consensus 13 ~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~ 85 (353)
|+|+++.+++. ++++.+.+.|.++++||+||+.++++|++|+..+.|.. ..|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999988884 58888999888999999999999999999999887754 456799999999999999999899
Q ss_pred CCCCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627 86 NEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (353)
Q Consensus 86 ~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~ 164 (353)
++||+|++.+. ..|++|..|..+..++|+...+. |.. . .|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~~~~~~~~~~~lp~ 139 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYT-V------------------DGGYAEYMVADERFAYPIPE 139 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccc-c------------------CCceEEEEEecchhEEECCC
Confidence 99999987655 47999999999999999877643 221 1 25899999999999999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
++++.+++.+.+++.+||+++ +.+++++++++||+|+|++|+++++++++.|+ +|+++.+++++.+.++++|++.+++
T Consensus 140 ~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 217 (329)
T cd08298 140 DYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGD 217 (329)
T ss_pred CCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEec
Confidence 999999999999999999998 88999999999999889999999999999999 8999989999999999999987776
Q ss_pred CCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (353)
... . ...++|+++++.+....++.++++++++ |+++.+|.... ....+....+..+..+.++....
T Consensus 218 ~~~--~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~- 283 (329)
T cd08298 218 SDD--L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANLT- 283 (329)
T ss_pred cCc--c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCCC-
Confidence 642 1 1237999999877767899999999997 99999885432 11122223234566776665332
Q ss_pred CCCCcHHHHHHHHHcCCCCC
Q 018627 325 KPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 325 ~~~~~~~~~~~~l~~g~i~~ 344 (353)
.+++.+++++++++.+++
T Consensus 284 --~~~~~~~~~l~~~~~l~~ 301 (329)
T cd08298 284 --RQDGEEFLKLAAEIPIKP 301 (329)
T ss_pred --HHHHHHHHHHHHcCCCCc
Confidence 357888999999998865
No 83
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=5.9e-35 Score=274.80 Aligned_cols=297 Identities=28% Similarity=0.441 Sum_probs=245.9
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (353)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd~ 90 (353)
||+++.+++..+++++.|.|.+.+++|+||+.++++|++|...+.+.. .+|.++|||++|+|+++|+++.++++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 588888886669999999999999999999999999999998887653 55778999999999999999999999999
Q ss_pred EEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 91 VLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 91 V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
|+..+. .+|+.|.+|+.+.++.|++..+...+ . .|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYT---T------------------QGGYAEYMVADAEYTVLLPDGLPLA 139 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccccCcc---c------------------CCccccEEEEcHHHeEECCCCCCHH
Confidence 988665 67999999999999999986543221 1 1489999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~ 249 (353)
+++.+.+.+.+||+++.+ .++.++++|||+|+|++|++++++|+.+|+ +|+++.+++++.+.++++|++.+++.. .
T Consensus 140 ~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~ 215 (330)
T cd08245 140 QAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG--A 215 (330)
T ss_pred HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC--C
Confidence 999999999999999855 789999999999888899999999999999 899999999999999999988887764 2
Q ss_pred ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCCC
Q 018627 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKT 328 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~ 328 (353)
...... ..+++|+++|+++.......++++++++ |+++.+|...... .......+ .++.++.++..+. ..
T Consensus 216 ~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~ 286 (330)
T cd08245 216 ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPP-FSPDIFPLIMKRQSIAGSTHGG---RA 286 (330)
T ss_pred cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCc-cccchHHHHhCCCEEEEeccCC---HH
Confidence 222222 2247999999988767889999999997 9999998754321 11212223 4577887776543 35
Q ss_pred cHHHHHHHHHcCCCCC
Q 018627 329 DLPSLVNRYLKKVRNT 344 (353)
Q Consensus 329 ~~~~~~~~l~~g~i~~ 344 (353)
.+.++++++.++++.+
T Consensus 287 ~~~~~~~ll~~~~l~~ 302 (330)
T cd08245 287 DLQEALDFAAEGKVKP 302 (330)
T ss_pred HHHHHHHHHHcCCCcc
Confidence 7888999999998864
No 84
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1e-34 Score=274.96 Aligned_cols=271 Identities=16% Similarity=0.183 Sum_probs=210.3
Q ss_pred eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhc---cC---CCCCcccccceeEEEEEeCCCCCCCCCCCeEEeeccc
Q 018627 25 LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWE---TQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97 (353)
Q Consensus 25 l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~---g~---~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~ 97 (353)
+++.++|.|+|. ++||||||.++|||+.|..... +. .++|.++|||++|+|+++|+++++|++||||++..
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 899999999975 9999999999999999853221 21 15678999999999999999999999999998641
Q ss_pred CCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh----hhh
Q 018627 98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK----ICL 173 (353)
Q Consensus 98 ~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~----aa~ 173 (353)
++|+||++++++.++++|+++++.+ ++.
T Consensus 101 ------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~ 132 (345)
T cd08293 101 ------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGA 132 (345)
T ss_pred ------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhhh
Confidence 2799999999999999999864432 455
Q ss_pred hchhhhHHHHHHHHhccCCCC--CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCC
Q 018627 174 LSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNN 249 (353)
Q Consensus 174 l~~~~~ta~~al~~~~~~~~g--~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~ 249 (353)
++.++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+++|+++|+++++++++.+.+++ +|+++++++. +
T Consensus 133 ~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~--~ 210 (345)
T cd08293 133 VGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK--T 210 (345)
T ss_pred cCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC--C
Confidence 667899999998787888877 99999997 9999999999999998679999999999998876 9999998876 4
Q ss_pred ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC---Cce--ec--chhhhhc--CcEEEeee
Q 018627 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEV--AA--HYGLFLS--GRTLKGSL 320 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~--~~--~~~~~~~--~~~i~g~~ 320 (353)
.++.+.+++++++++|++||++|+. .+..++++++++ |+++.+|..... ... .+ ....+.+ ++++..+.
T Consensus 211 ~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08293 211 DNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFL 288 (345)
T ss_pred CCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEE
Confidence 6788888887666899999999984 578999999997 999999853211 111 11 1111222 44443332
Q ss_pred cCCCCC--CCcHHHHHHHHHcCCCCCCCCcc
Q 018627 321 FGGWKP--KTDLPSLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 321 ~~~~~~--~~~~~~~~~~l~~g~i~~~~li~ 349 (353)
...+.. .+.+.++++++.+|++++...++
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~ 319 (345)
T cd08293 289 VLNYKDKFEEAIAQLSQWVKEGKLKVKETVY 319 (345)
T ss_pred eeccHhHHHHHHHHHHHHHHCCCccceeEEe
Confidence 222110 13466788999999998764443
No 85
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.7e-34 Score=270.69 Aligned_cols=290 Identities=28% Similarity=0.332 Sum_probs=230.1
Q ss_pred eeEEEEecCCCC--eEEEE-eecCCCCCCeEEEEEeeeecchhhhhhhccCC-----------------------CCCcc
Q 018627 13 CKAAVAWGAGQP--LVVEE-VEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------------------IFPRI 66 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-----------------------~~p~~ 66 (353)
|||+++.+++.+ +++.+ .+.|++.+++|+|||.++++|++|+..+.|.+ .+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 678888876643 56654 47788899999999999999999998776532 35789
Q ss_pred cccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCcc
Q 018627 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS 146 (353)
Q Consensus 67 ~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g 146 (353)
+|||++|+|+++|+++.+|++||||++.+...|+.|..|.. |.. .|.. . .|
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~-----~~~~-~------------------~g 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY-----IGSE-R------------------DG 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc-----cCCC-C------------------Cc
Confidence 99999999999999999999999999988777877665431 210 1100 1 15
Q ss_pred ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc
Q 018627 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (353)
Q Consensus 147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~ 225 (353)
+|++|+.++.+.++++|+++++.+++.+.+++.+||+++ +..++++|++|||+|+ |++|++++++|+++|+ +++++.
T Consensus 132 ~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~ 209 (350)
T cd08274 132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVA 209 (350)
T ss_pred cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEe
Confidence 899999999999999999999999999999999999987 7788999999999998 9999999999999999 788887
Q ss_pred CChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCcee
Q 018627 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304 (353)
Q Consensus 226 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 304 (353)
+++ +.+.++++|++.+++.. ...+.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|.... ....
T Consensus 210 ~~~-~~~~~~~~g~~~~~~~~--~~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~ 281 (350)
T cd08274 210 GAA-KEEAVRALGADTVILRD--APLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAG-PVVE 281 (350)
T ss_pred Cch-hhHHHHhcCCeEEEeCC--CccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCC-cccc
Confidence 665 78888999987555443 333333 344444 89999999997 5789999999997 99999986533 2133
Q ss_pred cchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627 305 AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 305 ~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~ 344 (353)
++... +.+++++.++.... .+.+.++++++.++++++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~ 319 (350)
T cd08274 282 LDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP 319 (350)
T ss_pred CCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc
Confidence 34444 35688888877543 467899999999998864
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=6.1e-34 Score=269.08 Aligned_cols=282 Identities=24% Similarity=0.325 Sum_probs=232.1
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCCC-CeEEEEEeeeecchhhhhhhccCCC--------CCcccccceeEEEEEeCC
Q 018627 13 CKAAVAWGAGQP---LVVEEVEVNPPQP-EEIRIKVVCTSLCRSDITAWETQAI--------FPRIFGHEASGIVESVGP 80 (353)
Q Consensus 13 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~eVlVrv~~~~i~~~D~~~~~g~~~--------~p~~~G~e~~G~V~~vG~ 80 (353)
|||+++.+.+.+ +++++.|.|.|.+ ++|+||+.++++|++|...+.|... +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999988875 8999999999988 9999999999999999988877642 567999999999999999
Q ss_pred CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (353)
Q Consensus 81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~ 160 (353)
++..+++||+|++... ..|+|++|+.++.+.++
T Consensus 81 ~v~~~~~Gd~V~~~~~-----------------------------------------------~~g~~~~~~~v~~~~~~ 113 (341)
T cd08290 81 GVKSLKPGDWVIPLRP-----------------------------------------------GLGTWRTHAVVPADDLI 113 (341)
T ss_pred CCCCCCCCCEEEecCC-----------------------------------------------CCccchheEeccHHHeE
Confidence 9999999999998621 01589999999999999
Q ss_pred ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hhHHHHH
Q 018627 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAK 235 (353)
Q Consensus 161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~----~~~~~~~ 235 (353)
++|+++++++++.+++.+.|||+++.....+++|++|||+|+ |++|++++|+|++.|+ +++++.+++ ++.+.++
T Consensus 114 ~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~ 192 (341)
T cd08290 114 KVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLK 192 (341)
T ss_pred eCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHH
Confidence 999999999999999999999999877778999999999987 9999999999999999 677766655 6678888
Q ss_pred hCCCceEeCCCCCCc---cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hh
Q 018627 236 AFGVTEFLNPNDNNE---PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FL 311 (353)
Q Consensus 236 ~~G~~~~~~~~~~~~---~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~ 311 (353)
++|+++++++. .. ++.+.++...++++|++|||+|+. .....+++++++ |+++.+|..... ...+.... +.
T Consensus 193 ~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~ 267 (341)
T cd08290 193 ALGADHVLTEE--ELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIF 267 (341)
T ss_pred hcCCCEEEeCc--ccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhh
Confidence 89999988775 33 566777766555899999999984 567788999997 999999864432 22233322 45
Q ss_pred cCcEEEeeecCCCCC---C----CcHHHHHHHHHcCCCCCCCC
Q 018627 312 SGRTLKGSLFGGWKP---K----TDLPSLVNRYLKKVRNTRKP 347 (353)
Q Consensus 312 ~~~~i~g~~~~~~~~---~----~~~~~~~~~l~~g~i~~~~l 347 (353)
+++++.+.....+.. . +.+.++++++.+|++.+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (341)
T cd08290 268 KDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPV 310 (341)
T ss_pred CCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcc
Confidence 689998887654321 1 24778999999999887644
No 87
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.9e-33 Score=265.10 Aligned_cols=277 Identities=18% Similarity=0.198 Sum_probs=223.3
Q ss_pred eEEEEecC---CCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCC
Q 018627 14 KAAVAWGA---GQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (353)
Q Consensus 14 ~a~~~~~~---~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~ 85 (353)
||+++.++ +.+ +++.++|.|+|+++||+|||+++++|++|...+.+.. .+|.++|+|++|+|+++|+++.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57777775 433 8888999999999999999999999999998776653 457799999999999999999999
Q ss_pred CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
++||+|++.... ...|+|++|++++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~~---------------------------------------------~~~g~~~~~~~v~~~~~~~ip~~ 115 (336)
T TIGR02817 81 KPGDEVWYAGDI---------------------------------------------DRPGSNAEFHLVDERIVGHKPKS 115 (336)
T ss_pred CCCCEEEEcCCC---------------------------------------------CCCCcccceEEEcHHHcccCCCC
Confidence 999999875200 01258999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCC-----CCEEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFG 238 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~-----g~~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G 238 (353)
+++++++.+++++.|||+++.+..++++ |++|||+|+ |++|++++|+|+++ |+ +|+++.+++++.+.++++|
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g 194 (336)
T TIGR02817 116 LSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELG 194 (336)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcC
Confidence 9999999999999999999878788877 999999987 99999999999998 99 8999989999999999999
Q ss_pred CceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEE
Q 018627 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLK 317 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~ 317 (353)
+++++++. .++.+.+++...+++|+++|++++...+...+++++++ |+++.++.. ..++. ..+. +++++.
T Consensus 195 ~~~~~~~~---~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~~--~~~~~~~~~~~ 265 (336)
T TIGR02817 195 AHHVIDHS---KPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELDI--SPFKRKSISLH 265 (336)
T ss_pred CCEEEECC---CCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---ccccc--hhhhhcceEEE
Confidence 99988764 25677777654448999999987667889999999997 999998532 22222 2223 346665
Q ss_pred eeecC--CCCC-------CCcHHHHHHHHHcCCCCCC
Q 018627 318 GSLFG--GWKP-------KTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 318 g~~~~--~~~~-------~~~~~~~~~~l~~g~i~~~ 345 (353)
+.... .... ...+.++++++.++++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 302 (336)
T TIGR02817 266 WEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT 302 (336)
T ss_pred EEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc
Confidence 43322 1110 1347789999999988753
No 88
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.6e-33 Score=260.32 Aligned_cols=299 Identities=25% Similarity=0.331 Sum_probs=241.7
Q ss_pred eeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++...+ +.+++++.+.|.++++||+||+.++++|++|+....+.. ..|.++|||++|+|+.+|+.+.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998664 348888888888999999999999999999998877654 3467899999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++.....|+.|.+ ..|.... +.|.. ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~------~~~~~~~--~~~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~ 133 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPP------TAEDEAS--ALGGP-------------------IDGVLAEYVVLPEEGLVRAPDHL 133 (336)
T ss_pred CCCEEEEecccccccccc------ccccccc--ccccc-------------------cCceeeeEEEecHHHeEECCCCC
Confidence 999999987666544333 3332211 11111 12589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
++.+++.+.+.+.+||+++.+...+++|++|+|+|+|++|+++++++++.|+ +|+++++++++.+.++++|++.+++..
T Consensus 134 ~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (336)
T cd08276 134 SFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYR 212 (336)
T ss_pred CHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCC
Confidence 9999999999999999998777889999999999879999999999999999 799999999999999999999888765
Q ss_pred CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (353)
. +.++.+.++..+++ ++|+++|+++. ..+..++++++++ |+++.+|..............+.+++++.++..+.
T Consensus 213 ~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 287 (336)
T cd08276 213 T-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS-- 287 (336)
T ss_pred c-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc--
Confidence 2 25677788887776 99999999985 6788999999997 99999997654221111222245699998887554
Q ss_pred CCCcHHHHHHHHHcCCCCCC
Q 018627 326 PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 326 ~~~~~~~~~~~l~~g~i~~~ 345 (353)
.+.+.++++++.++.+.+.
T Consensus 288 -~~~~~~~~~l~~~~~l~~~ 306 (336)
T cd08276 288 -RAQFEAMNRAIEAHRIRPV 306 (336)
T ss_pred -HHHHHHHHHHHHcCCcccc
Confidence 4578889999988887653
No 89
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.5e-33 Score=255.14 Aligned_cols=266 Identities=31% Similarity=0.481 Sum_probs=221.7
Q ss_pred eEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcc
Q 018627 39 EIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE 114 (353)
Q Consensus 39 eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~ 114 (353)
||+|||.++++|+.|+..+.+.. .+|.++|+|++|+|+++|+++..|++||+|++.+...|+.|..|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 69999999999999999887753 3578999999999999999999999999999999999999999997 676
Q ss_pred cccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCC
Q 018627 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKG 194 (353)
Q Consensus 115 ~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g 194 (353)
+....... ..|+|++|+.++.+.++++|+++++++++.+++++.+||+++.+...+.++
T Consensus 77 ~~~~~~~~---------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~ 135 (271)
T cd05188 77 GGGILGEG---------------------LDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPG 135 (271)
T ss_pred CCCEeccc---------------------cCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCC
Confidence 65532111 125899999999999999999999999999989999999998777777999
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCC
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~ 273 (353)
++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.++++. ..++.+.+. ...+ ++|+++++++.
T Consensus 136 ~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~-~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 136 DTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR-LTGGGGADVVIDAVGG 211 (271)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH-HhcCCCCCEEEECCCC
Confidence 999999986699999999999998 999999999999999999988888765 445555555 4444 89999999997
Q ss_pred hHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCcHHHHHHHH
Q 018627 274 TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRY 337 (353)
Q Consensus 274 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~l 337 (353)
......++++++++ |+++.+|..............+.+++++.++..+.+ ++++++++++
T Consensus 212 ~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 271 (271)
T cd05188 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDLL 271 (271)
T ss_pred HHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhhC
Confidence 56788899999996 999999987654333333344567999999887653 5777777653
No 90
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=7e-33 Score=260.37 Aligned_cols=284 Identities=21% Similarity=0.259 Sum_probs=227.1
Q ss_pred eeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCC
Q 018627 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 12 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
+|+++++.+++.+ ++++++|.|+++++||+||+.++++|++|+....+.+ .+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999887654 9999999999999999999999999999998877654 3567899999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|+.... ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~-----------------------------------------------~~g~~~~~v~v~~~~~~~lp~~~ 113 (327)
T PRK10754 81 VGDRVVYAQS-----------------------------------------------ALGAYSSVHNVPADKAAILPDAI 113 (327)
T ss_pred CCCEEEECCC-----------------------------------------------CCcceeeEEEcCHHHceeCCCCC
Confidence 9999985410 02489999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++++++.++..+.++|.++.+...+.+|++|+|+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|++++++.
T Consensus 114 ~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 192 (327)
T PRK10754 114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINY 192 (327)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC
Confidence 999999988899999999877788999999999976 9999999999999999 88888899999999999999888876
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhc-CcEE-E-eeec
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS-GRTL-K-GSLF 321 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i-~-g~~~ 321 (353)
+ ..++.+.++..+++ ++|++|||+++ ......+++++++ |+++.+|..... ...+....+.+ +..+ . ....
T Consensus 193 ~--~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 267 (327)
T PRK10754 193 R--EENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSLQ 267 (327)
T ss_pred C--CCcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEecceee
Confidence 5 56677888888776 89999999987 5678899999997 999999976431 11122221112 2111 1 1111
Q ss_pred CCCCCC----CcHHHHHHHHHcCCCCCCCCc
Q 018627 322 GGWKPK----TDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 322 ~~~~~~----~~~~~~~~~l~~g~i~~~~li 348 (353)
..+... +.+.++++++++|++++..++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~ 298 (327)
T PRK10754 268 GYITTREELTEASNELFSLIASGVIKVDVAE 298 (327)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCeeeeccc
Confidence 111111 224567899999998865443
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-32 Score=256.10 Aligned_cols=279 Identities=20% Similarity=0.274 Sum_probs=228.6
Q ss_pred eeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627 12 TCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (353)
Q Consensus 12 ~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~ 85 (353)
||||+++.+++. .+++.+.+.|++.++||+|||.++++|+.|...+.+.. ..|.++|+|++|+|+++|+++..+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 699999988775 37778888888999999999999999999988877644 234689999999999999999999
Q ss_pred CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
++||+|+++.. .|+|++|++++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~v~~~~~~~ip~~ 112 (334)
T PTZ00354 81 KEGDRVMALLP------------------------------------------------GGGYAEYAVAHKGHVMHIPQG 112 (334)
T ss_pred CCCCEEEEecC------------------------------------------------CCceeeEEEecHHHcEeCCCC
Confidence 99999988621 148999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
+++.+++.+.+++.+||+++.+...+++|++|||+|+ |.+|++++++|+++|+ .++.+.+++++.+.++++|++.+++
T Consensus 113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (334)
T PTZ00354 113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIR 191 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999999878788999999999996 9999999999999999 6677888999999999999988887
Q ss_pred CCCCCcc-HHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCcee-cchhhh-hcCcEEEeee
Q 018627 245 PNDNNEP-VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AHYGLF-LSGRTLKGSL 320 (353)
Q Consensus 245 ~~~~~~~-~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~ 320 (353)
+. ..+ +.+.++..+++ ++|++||++++ ..+..++++++++ |+++.+|.... ..+. +....+ .++.++.++.
T Consensus 192 ~~--~~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (334)
T PTZ00354 192 YP--DEEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFST 266 (334)
T ss_pred cC--ChhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeee
Confidence 65 333 67777777765 89999999986 6788999999997 99999986543 2222 333333 3466888776
Q ss_pred cCCCCCC-------CcHHHHHHHHHcCCCCC
Q 018627 321 FGGWKPK-------TDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 321 ~~~~~~~-------~~~~~~~~~l~~g~i~~ 344 (353)
....... +.+.+++++++++++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 297 (334)
T PTZ00354 267 LRSRSDEYKADLVASFEREVLPYMEEGEIKP 297 (334)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHCCCccC
Confidence 5442111 22467888999998764
No 92
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=3.2e-32 Score=255.05 Aligned_cols=279 Identities=22% Similarity=0.242 Sum_probs=229.3
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~ 84 (353)
|||+++++++.+ +++.+.+.|.+.+++|+||+.++++|++|+..+.|.. ..|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689998876543 7777888888899999999999999999998876643 34578999999999999999999
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~ 164 (353)
+++||+|++.... . .|+|++|++++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~----------------------------~------------------~g~~~~~~~v~~~~~~~lp~ 114 (324)
T cd08244 81 AWLGRRVVAHTGR----------------------------A------------------GGGYAELAVADVDSLHPVPD 114 (324)
T ss_pred CCCCCEEEEccCC----------------------------C------------------CceeeEEEEEchHHeEeCCC
Confidence 9999999986210 0 24899999999999999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~ 243 (353)
++++++++.+++.+.||| ++.+..+++++++|||+|+ |++|++++++|+++|+ +|+++.+++++.+.++++|++.++
T Consensus 115 ~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 192 (324)
T cd08244 115 GLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAV 192 (324)
T ss_pred CCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 999999999999999995 5567788999999999996 9999999999999999 899999999999999999998888
Q ss_pred CCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeec
Q 018627 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLF 321 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 321 (353)
++. +.++.+.+.+..++ ++|+++|++|+. ....++++++++ |+++.+|...... ..++... +.+++++.++..
T Consensus 193 ~~~--~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08244 193 DYT--RPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLLG 267 (324)
T ss_pred ecC--CccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEeec
Confidence 775 45677777777766 899999999985 568899999996 9999999765422 2334222 345888887765
Q ss_pred CCCCC---CCcHHHHHHHHHcCCCCC
Q 018627 322 GGWKP---KTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 322 ~~~~~---~~~~~~~~~~l~~g~i~~ 344 (353)
....+ .+.+.+++++++++++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~l~~ 293 (324)
T cd08244 268 VQAERGGLRALEARALAEAAAGRLVP 293 (324)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCccC
Confidence 44321 245777889999998864
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.4e-32 Score=258.49 Aligned_cols=278 Identities=24% Similarity=0.303 Sum_probs=229.0
Q ss_pred eeeEEEEecCCC----CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC
Q 018627 12 TCKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (353)
Q Consensus 12 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~ 83 (353)
.|||+++.+++. ++++++++.|.+.++||+|||.++++|++|+..+.|.. .+|.++|+|++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 489999988765 49999999999999999999999999999998876643 5678999999999999999999
Q ss_pred CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (353)
Q Consensus 84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP 163 (353)
++++||+|++.. .|+|++|++++.+.++++|
T Consensus 81 ~~~~Gd~V~~~~-------------------------------------------------~g~~~s~~~v~~~~~~~ip 111 (329)
T cd08250 81 DFKVGDAVATMS-------------------------------------------------FGAFAEYQVVPARHAVPVP 111 (329)
T ss_pred CCCCCCEEEEec-------------------------------------------------CcceeEEEEechHHeEECC
Confidence 999999999862 1489999999999999999
Q ss_pred CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (353)
Q Consensus 164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~ 242 (353)
++ +.+++.+.+++.+||+++.+..++++|++|||+|+ |.+|++++++|++.|+ +|+++.+++++.+.++++|++.+
T Consensus 112 ~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 188 (329)
T cd08250 112 EL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRP 188 (329)
T ss_pred CC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceE
Confidence 97 35677888899999999877788999999999996 9999999999999999 89998899999999999999888
Q ss_pred eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC---------ceecchhhhhcC
Q 018627 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP---------EVAAHYGLFLSG 313 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------~~~~~~~~~~~~ 313 (353)
++.. ..++.+.+....++++|++||++|+ ..+..++++++++ |+++.+|...... ...+....+.++
T Consensus 189 ~~~~--~~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T cd08250 189 INYK--TEDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKS 264 (329)
T ss_pred EeCC--CccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcC
Confidence 7765 4556666666554589999999996 6788999999996 9999998764321 112223334568
Q ss_pred cEEEeeecCCCC--CCCcHHHHHHHHHcCCCCCC
Q 018627 314 RTLKGSLFGGWK--PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 314 ~~i~g~~~~~~~--~~~~~~~~~~~l~~g~i~~~ 345 (353)
+++.++....+. ..+.+.++++++.++.+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (329)
T cd08250 265 ASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCE 298 (329)
T ss_pred ceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeee
Confidence 888887654321 12457788899999988764
No 94
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=2.6e-32 Score=258.11 Aligned_cols=285 Identities=26% Similarity=0.308 Sum_probs=227.1
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
|+|+++.+++ ..++++++|.|+|+++||+||+.++++|++|+....+.. .+|.++|||++|+|+.+|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGD 80 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCCCC
Confidence 7899999885 348999999999999999999999999999988765542 4678999999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
+|++++...|+ +. ...|+|++|++++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~---------------------~~-------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~ 120 (339)
T cd08249 81 RVAGFVHGGNP---------------------ND-------------------PRNGAFQEYVVADADLTAKIPDNISFE 120 (339)
T ss_pred EEEEEeccccC---------------------CC-------------------CCCCcccceEEechhheEECCCCCCHH
Confidence 99987543221 00 012589999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccC----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADI----------SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~----------~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 238 (353)
+++.+++.+.+||+++.+..++ .+++++||+|+ |.+|++++++|+++|+ +|+++. ++++.+.++++|
T Consensus 121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g 198 (339)
T cd08249 121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG 198 (339)
T ss_pred HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence 9999999999999998666544 78999999997 8999999999999999 787776 568889999999
Q ss_pred CceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcc--CCceEEEEcCCCCCCceecchhhhhcCcEE
Q 018627 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD--GWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (353)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (353)
+++++++. ..++.+.+++.+++++|++||++|.+..+..+++++++ + |+++.+|...... . +..+..+
T Consensus 199 ~~~v~~~~--~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~-----~~~~~~~ 268 (339)
T cd08249 199 ADAVFDYH--DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--E-----PRKGVKV 268 (339)
T ss_pred CCEEEECC--CchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--c-----CCCCceE
Confidence 98888876 46677788777666899999999976778999999999 8 9999998765422 0 1112222
Q ss_pred EeeecCC---------CCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627 317 KGSLFGG---------WKPKTDLPSLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 317 ~g~~~~~---------~~~~~~~~~~~~~l~~g~i~~~~li~ 349 (353)
....... ......+.+++++++++++.+.++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 310 (339)
T cd08249 269 KFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRV 310 (339)
T ss_pred EEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCcee
Confidence 2211111 11123466788999999998765544
No 95
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.1e-31 Score=249.49 Aligned_cols=269 Identities=21% Similarity=0.261 Sum_probs=219.6
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (353)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V 91 (353)
||++++.+.+ ..+++++.|.|.++++||+||+.++++|+.|.+..... ..|.++|||++|+|+++|+++..|++||+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V 79 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-PDGAVPGWDAAGVVERAAADGSGPAVGARV 79 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-CCCCcccceeEEEEEEeCCCCCCCCCCCEE
Confidence 6788887754 12778899999999999999999999999998876533 457889999999999999999999999999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhh
Q 018627 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171 (353)
Q Consensus 92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~a 171 (353)
++... .|+|++|+.++.+.++++|++++++++
T Consensus 80 ~~~~~------------------------------------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a 111 (305)
T cd08270 80 VGLGA------------------------------------------------MGAWAELVAVPTGWLAVLPDGVSFAQA 111 (305)
T ss_pred EEecC------------------------------------------------CcceeeEEEEchHHeEECCCCCCHHHH
Confidence 88620 148999999999999999999999999
Q ss_pred hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 172 a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
+.+++.+.+||+++.+.... +|++|+|+|+ |++|++++++|++.|+ +|+.+.+++++.+.++++|++..++.. .
T Consensus 112 ~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~ 186 (305)
T cd08270 112 ATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG---S 186 (305)
T ss_pred HHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc---c
Confidence 99999999999998665544 5999999998 9999999999999999 899998999999999999987655332 1
Q ss_pred cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh---cCcEEEeeecCC-CCC
Q 018627 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL---SGRTLKGSLFGG-WKP 326 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~---~~~~i~g~~~~~-~~~ 326 (353)
+..++++|+++|++|+ ..+..++++++.+ |+++.+|.... ....+....+. ++.++.++.... ...
T Consensus 187 -------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (305)
T cd08270 187 -------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSSG-EPAVFNPAAFVGGGGGRRLYTFFLYDGEPL 256 (305)
T ss_pred -------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccCC-CcccccHHHHhcccccceEEEEEccCHHHH
Confidence 1122479999999997 4688999999997 99999997643 22333444343 388888877653 112
Q ss_pred CCcHHHHHHHHHcCCCCCC
Q 018627 327 KTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 327 ~~~~~~~~~~l~~g~i~~~ 345 (353)
.+.+..++++++++++++.
T Consensus 257 ~~~~~~~~~~~~~~~i~~~ 275 (305)
T cd08270 257 AADLARLLGLVAAGRLDPR 275 (305)
T ss_pred HHHHHHHHHHHHCCCccce
Confidence 3568889999999999864
No 96
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.3e-31 Score=250.96 Aligned_cols=267 Identities=23% Similarity=0.336 Sum_probs=226.1
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCC
Q 018627 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECK 100 (353)
Q Consensus 25 l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~ 100 (353)
+++++.|.|.+.+++|+||++++++|+.|...+.+.. .+|.++|+|++|+|+.+|+++..+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 7788888999999999999999999999998876654 34679999999999999999999999999998731
Q ss_pred CCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhH
Q 018627 101 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180 (353)
Q Consensus 101 ~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~t 180 (353)
+ |+|++|+.++...++++|+++++.+++.+++.+.+
T Consensus 90 --------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~t 125 (323)
T cd05282 90 --------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLT 125 (323)
T ss_pred --------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHH
Confidence 1 48999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHH
Q 018627 181 GLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (353)
Q Consensus 181 a~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 259 (353)
||+++.+...+.+|++|||+|+ |.+|++++++|+++|+ .++++.+++++.+.++++|++.++++. ..++.+.+.+.
T Consensus 126 a~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~ 202 (323)
T cd05282 126 AWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSS--PEDLAQRVKEA 202 (323)
T ss_pred HHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEeccc--chhHHHHHHHH
Confidence 9999878778899999999987 8999999999999999 888888889999999999999888876 45677778777
Q ss_pred hcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCC-------CCcH
Q 018627 260 TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKP-------KTDL 330 (353)
Q Consensus 260 ~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~~ 330 (353)
+++ ++|++|||+|+. .....+++++++ |+++.+|..... ...+....+. +++++.++....+.. .+.+
T Consensus 203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd05282 203 TGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETF 279 (323)
T ss_pred hcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHH
Confidence 776 999999999984 467889999996 999999876553 3344444445 789998887665532 1347
Q ss_pred HHHHHHHHcCCCCCC
Q 018627 331 PSLVNRYLKKVRNTR 345 (353)
Q Consensus 331 ~~~~~~l~~g~i~~~ 345 (353)
.++++++.++++.+.
T Consensus 280 ~~~~~~l~~~~l~~~ 294 (323)
T cd05282 280 AEVIKLVEAGVLTTP 294 (323)
T ss_pred HHHHHHHhCCCcccC
Confidence 788899999988753
No 97
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.4e-31 Score=250.66 Aligned_cols=279 Identities=20% Similarity=0.191 Sum_probs=227.5
Q ss_pred eeEEEEecCCCC-----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC
Q 018627 13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE 84 (353)
Q Consensus 13 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~ 84 (353)
|+|+++.+++.+ ++++++|.|.+.+++|+||+.++++|++|+..+.+.. .+|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 579999888763 6677888888999999999999999999998876654 36779999999999999999999
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~ 164 (353)
+++||+|+...... . .|+|++|+.++...++++|+
T Consensus 81 ~~~Gd~V~~~~~~~---------------------------~------------------~g~~~~~~~v~~~~~~~ip~ 115 (336)
T cd08252 81 FKVGDEVYYAGDIT---------------------------R------------------PGSNAEYQLVDERIVGHKPK 115 (336)
T ss_pred CCCCCEEEEcCCCC---------------------------C------------------CccceEEEEEchHHeeeCCC
Confidence 99999998752100 1 24899999999999999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHHhccCCC-----CCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhC
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF 237 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~-----g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~ 237 (353)
++++++++.+++.+.+||.++.+...+.+ |++|+|+|+ |++|++++++|+.+| + +|+++++++++.+.++++
T Consensus 116 ~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~ 194 (336)
T cd08252 116 SLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKEL 194 (336)
T ss_pred CCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhc
Confidence 99999999999999999999877788877 999999986 999999999999999 7 899999999999999999
Q ss_pred CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEE
Q 018627 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTL 316 (353)
Q Consensus 238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i 316 (353)
|++.++++. . ++.+.++....+++|++||++|.+..+..++++++++ |+++.+|... ..+ +...+ .+++++
T Consensus 195 g~~~~~~~~--~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~--~~~~~~~~~~~~ 266 (336)
T cd08252 195 GADHVINHH--Q-DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--EPL--DLGPLKSKSASF 266 (336)
T ss_pred CCcEEEeCC--c-cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--Ccc--cchhhhcccceE
Confidence 998888765 2 4556666443348999999999767889999999996 9999998653 222 23333 468888
Q ss_pred EeeecCCCC--C-------CCcHHHHHHHHHcCCCCCC
Q 018627 317 KGSLFGGWK--P-------KTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 317 ~g~~~~~~~--~-------~~~~~~~~~~l~~g~i~~~ 345 (353)
.+.....+. . .+.+.++++++.+|++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (336)
T cd08252 267 HWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT 304 (336)
T ss_pred EEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence 776543211 1 1236788999999988754
No 98
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=3.1e-31 Score=248.56 Aligned_cols=260 Identities=20% Similarity=0.253 Sum_probs=209.4
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++++++. +++++++|.|.++++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++ ++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 78999998875 69999999999999999999999999999998887764 24789999999999998 456799
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++.+.. .|.. ..|+|++|++++++.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~g~~-------------------~~g~~~~~~~v~~~~~~~lp~~~ 116 (325)
T cd05280 79 EGDEVLVTGYD-----------------------LGMN-------------------TDGGFAEYVRVPADWVVPLPEGL 116 (325)
T ss_pred CCCEEEEcccc-----------------------cCCC-------------------CCceeEEEEEEchhhEEECCCCC
Confidence 99999986310 0111 12589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhc--cCC-CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVA--DIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~--~~~-~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~ 242 (353)
++++++.+++.+.++++++.... ++. .+++|||+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|++.+
T Consensus 117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 195 (325)
T cd05280 117 SLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEV 195 (325)
T ss_pred CHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE
Confidence 99999999999999999885543 335 3579999998 9999999999999999 79999999999999999999888
Q ss_pred eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeec
Q 018627 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (353)
++... . .....+....+++|++||++|+ ..+..++++++++ |+++.+|..... ...+.+..+ .+++++.+...
T Consensus 196 ~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 196 LDRED--L-LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred Ecchh--H-HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEEe
Confidence 87642 1 1222233333489999999997 5789999999997 999999976442 223333334 46888888765
Q ss_pred CC
Q 018627 322 GG 323 (353)
Q Consensus 322 ~~ 323 (353)
..
T Consensus 270 ~~ 271 (325)
T cd05280 270 VN 271 (325)
T ss_pred ec
Confidence 43
No 99
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.1e-31 Score=246.29 Aligned_cols=270 Identities=25% Similarity=0.364 Sum_probs=220.1
Q ss_pred cCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhh-ccCC-----CCCcccccceeEEEEEeCCCCCCCCCCCeEEe
Q 018627 20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93 (353)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~-~g~~-----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~ 93 (353)
++++ +++++++.|++.++||+||+.++++|++|+..+ .+.. .+|.++|+|++|+|+.+|+++.++++||+|++
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 3444 999999999999999999999999999998877 5543 13779999999999999999999999999998
Q ss_pred ecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhh
Q 018627 94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 173 (353)
Q Consensus 94 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~ 173 (353)
+. .|+|++|++++++.++++|+++ .+++.
T Consensus 82 ~~-------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~ 110 (312)
T cd08269 82 LS-------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAF 110 (312)
T ss_pred ec-------------------------------------------------CCcceeeEEEchhheEECCCch--hhhHH
Confidence 62 1489999999999999999988 33333
Q ss_pred hchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHH
Q 018627 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253 (353)
Q Consensus 174 l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 253 (353)
+..+++++++++. ..+++++++|||+|+|.+|++++++|+++|++.|+++.+++++.++++++|++.++++. ..++.
T Consensus 111 ~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~ 187 (312)
T cd08269 111 PGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD--SEAIV 187 (312)
T ss_pred hhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC--CcCHH
Confidence 3368889999875 78899999999998799999999999999994399998999999999999998888765 56678
Q ss_pred HHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC-CCCcH
Q 018627 254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK-PKTDL 330 (353)
Q Consensus 254 ~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-~~~~~ 330 (353)
+.+.+.+++ ++|+++||+|....+..++++++++ |+++.+|.... ...++.... .++++.+.++...... ..+.+
T Consensus 188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (312)
T cd08269 188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQD-GPRPVPFQTWNWKGIDLINAVERDPRIGLEGM 265 (312)
T ss_pred HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CCcccCHHHHhhcCCEEEEecccCccchhhHH
Confidence 888887776 9999999998767789999999997 99999997542 222333222 3567777766533321 23678
Q ss_pred HHHHHHHHcCCCCCCC
Q 018627 331 PSLVNRYLKKVRNTRK 346 (353)
Q Consensus 331 ~~~~~~l~~g~i~~~~ 346 (353)
++++++++++++++.+
T Consensus 266 ~~~~~~~~~~~l~~~~ 281 (312)
T cd08269 266 REAVKLIADGRLDLGS 281 (312)
T ss_pred HHHHHHHHcCCCCchh
Confidence 9999999999988644
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.7e-31 Score=247.01 Aligned_cols=281 Identities=25% Similarity=0.324 Sum_probs=224.8
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (353)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v 87 (353)
||++++.+.+. .+++.+.+.|.++++||+||+.++++|++|+..+.+.. ..|.++|||++|+|+++|. ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 67888877664 37778888888999999999999999999998887653 4568899999999999995 57999
Q ss_pred CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
||+|+++...- + ....|+|++|+.++...++++|++++
T Consensus 79 Gd~V~~~~~~~-----------------------~-------------------~~~~g~~~~~~~~~~~~~~~ip~~~~ 116 (320)
T cd08243 79 GQRVATAMGGM-----------------------G-------------------RTFDGSYAEYTLVPNEQVYAIDSDLS 116 (320)
T ss_pred CCEEEEecCCC-----------------------C-------------------CCCCcccceEEEcCHHHcEeCCCCCC
Confidence 99999873210 0 00125899999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
+++++.+++++.+||+++.+...+.+|++|||+|+ |++|++++++|+++|+ +|+++.+++++.+.++++|++++++.
T Consensus 117 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~- 194 (320)
T cd08243 117 WAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID- 194 (320)
T ss_pred HHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-
Confidence 99999999999999999988788999999999997 9999999999999999 79999899999999999999887643
Q ss_pred CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCce----ecchhhhhcCcEEEeeecC
Q 018627 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV----AAHYGLFLSGRTLKGSLFG 322 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~i~g~~~~ 322 (353)
..++.+.+++. +.++|+++|++|+ ..+..++++++++ |+++.+|........ ......+.+++++.++...
T Consensus 195 --~~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (320)
T cd08243 195 --DGAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSG 269 (320)
T ss_pred --CccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchh
Confidence 34667777776 5599999999997 6788999999997 999999975332211 1111112357777666543
Q ss_pred CCCCCCcHHHHHHHHHcCCCCCC
Q 018627 323 GWKPKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 323 ~~~~~~~~~~~~~~l~~g~i~~~ 345 (353)
... .+.+.+++++++.+++++.
T Consensus 270 ~~~-~~~~~~~~~~~~~~~~~~~ 291 (320)
T cd08243 270 DVP-QTPLQELFDFVAAGHLDIP 291 (320)
T ss_pred hhh-HHHHHHHHHHHHCCceecc
Confidence 321 2357788999999988753
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=7.8e-31 Score=246.16 Aligned_cols=257 Identities=19% Similarity=0.214 Sum_probs=206.2
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++...+.+ +++++.|.|.|.++||+||+.++++|++|.....+.. .+|.++|||++|+|+++| +.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789999887764 8899999999999999999999999999986654221 458899999999999954 56799
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++.+.. .|. ...|+|+||++++++.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~~~-------------------~~~g~~~~~~~v~~~~~~~~p~~~ 116 (326)
T cd08289 79 PGDEVIVTSYD-----------------------LGV-------------------SHHGGYSEYARVPAEWVVPLPKGL 116 (326)
T ss_pred CCCEEEEcccc-----------------------cCC-------------------CCCCcceeEEEEcHHHeEECCCCC
Confidence 99999986320 010 012599999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhc--c-CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVA--D-ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~--~-~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~ 242 (353)
++++++.+++.+.||+.++.... . ...+++|||+|+ |++|++++|+|+++|+ +|+++.+++++.+.++++|++.+
T Consensus 117 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 195 (326)
T cd08289 117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEV 195 (326)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEE
Confidence 99999999999999998875432 2 335789999998 9999999999999999 89999999999999999999888
Q ss_pred eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeee
Q 018627 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL 320 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 320 (353)
++.++ . ..+.++...++++|++||++|. ..+..++++++++ |+++.+|.... ..++.....+ .+++++.+..
T Consensus 196 ~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 196 IPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred Ecchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence 87652 2 3445555544489999999997 6788999999997 99999997643 2223223333 5688888875
No 102
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=9.3e-31 Score=245.42 Aligned_cols=277 Identities=20% Similarity=0.218 Sum_probs=215.0
Q ss_pred eEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (353)
Q Consensus 14 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v 87 (353)
||+++...+.+ ++++++|.|.+.++||+||++++++|++|+..+.|.. .+|.++|||++|+|+. +++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 57788776653 7899999999999999999999999999998887754 4478999999999998 55678999
Q ss_pred CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
||+|++.+... |. ...|+|++|+.++.+.++++|++++
T Consensus 79 Gd~V~~~~~~~-----------------------~~-------------------~~~g~~~~~~~~~~~~~~~iP~~~~ 116 (323)
T TIGR02823 79 GDEVIVTGYGL-----------------------GV-------------------SHDGGYSQYARVPADWLVPLPEGLS 116 (323)
T ss_pred CCEEEEccCCC-----------------------CC-------------------CCCccceEEEEEchhheEECCCCCC
Confidence 99999863210 00 0125899999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHh--ccCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627 168 LEKICLLSCGLSAGLGAAWNV--ADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~--~~~~~g~-~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~ 243 (353)
+++++.+++.+.+++.++... ..+.+|+ +|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++|++.++
T Consensus 117 ~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~ 195 (323)
T TIGR02823 117 LREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVI 195 (323)
T ss_pred HHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEE
Confidence 999999999999998876433 3478898 9999998 9999999999999999 788777888888999999998888
Q ss_pred CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecC
Q 018627 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG 322 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 322 (353)
+.. +.+. .++...++++|+++||+|+ ..+..++++++++ |+++.+|.... .........+ .+++++.+....
T Consensus 196 ~~~--~~~~--~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 268 (323)
T TIGR02823 196 DRE--DLSP--PGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSV 268 (323)
T ss_pred ccc--cHHH--HHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEecc
Confidence 764 2222 3444444479999999997 4688999999997 99999997643 2233332333 568888886544
Q ss_pred CCCCCC----cHHHHHHHHHcCCCC
Q 018627 323 GWKPKT----DLPSLVNRYLKKVRN 343 (353)
Q Consensus 323 ~~~~~~----~~~~~~~~l~~g~i~ 343 (353)
... .+ .+..+.+++..++++
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~~~ 292 (323)
T TIGR02823 269 YCP-MALREAAWQRLATDLKPRNLE 292 (323)
T ss_pred ccC-chhHHHHHHHHHHHhhcCCCc
Confidence 221 12 244555666677664
No 103
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=7.5e-31 Score=246.57 Aligned_cols=279 Identities=19% Similarity=0.198 Sum_probs=222.1
Q ss_pred eeEEEEecCCC------CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--C----CCcccccceeEEEEEeCC
Q 018627 13 CKAAVAWGAGQ------PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--I----FPRIFGHEASGIVESVGP 80 (353)
Q Consensus 13 ~~a~~~~~~~~------~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~----~p~~~G~e~~G~V~~vG~ 80 (353)
.|||++.+.++ .++++++|.|++.+++|+||+.++++|+.|.....+.. . .+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46777764431 29999999999999999999999999998765444321 1 245789999999999996
Q ss_pred CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeC-Cce
Q 018627 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA 159 (353)
Q Consensus 81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~~v 159 (353)
. ++++||||+++ ++|++|+.++. +.+
T Consensus 82 ~--~~~~Gd~V~~~---------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 82 P--DFKVGDLVSGF---------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred C--CCCCCCEEecc---------------------------------------------------cceEEEEEecchhhc
Confidence 4 79999999875 37999999999 999
Q ss_pred EECCCCCC--hhhhhh-hchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627 160 VKVSSIAP--LEKICL-LSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (353)
Q Consensus 160 ~~iP~~l~--~~~aa~-l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 235 (353)
+++|++++ +.+++. +++++.+||+++.+...+.++++|||+|+ |++|++++++|++.|+ +|+++.+++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999985 445555 88899999999877788999999999996 9999999999999999 8999989999999998
Q ss_pred h-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCcee----c-chhh
Q 018627 236 A-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA----A-HYGL 309 (353)
Q Consensus 236 ~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~-~~~~ 309 (353)
+ +|++.++++. +.++.+.+....++++|++|||+|+ ..+..++++++++ |+++.+|......... + ....
T Consensus 188 ~~~g~~~~~~~~--~~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd05288 188 EELGFDAAINYK--TPDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNI 263 (329)
T ss_pred hhcCCceEEecC--ChhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHH
Confidence 8 9998888876 4456777776665689999999997 6788999999997 9999998754422111 1 2223
Q ss_pred hhcCcEEEeeecCCCCC--CCcHHHHHHHHHcCCCCCCCCcc
Q 018627 310 FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 310 ~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~g~i~~~~li~ 349 (353)
+.++.++.++....+.. .+.+.++++++.+|++++.++.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 305 (329)
T cd05288 264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVV 305 (329)
T ss_pred hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccccc
Confidence 45688888776543321 14577889999999998776554
No 104
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.7e-30 Score=240.51 Aligned_cols=278 Identities=26% Similarity=0.346 Sum_probs=228.7
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++.+++.+ +++.+.+.|.+.+++|+||+.++++|++|+....+.. .+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 789999876543 7888888888999999999999999999998876643 3568999999999999999998999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|+++.. .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (323)
T cd05276 81 VGDRVCALLA------------------------------------------------GGGYAEYVVVPAGQLLPVPEGL 112 (323)
T ss_pred CCCEEEEecC------------------------------------------------CCceeEEEEcCHHHhccCCCCC
Confidence 9999998621 1489999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++.+++.+..++.++|+++.+...+.++++++|+|+ |++|+++++++++.|+ +|+++.+++++.+.++++|++.+++.
T Consensus 113 ~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd05276 113 SLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINY 191 (323)
T ss_pred CHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999877788999999999997 8999999999999999 89999999999999999998887776
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (353)
. ..++.+.+.....+ ++|++|+++|+. ....++++++++ |+++.+|..... ...+....+ .+++++.++....
T Consensus 192 ~--~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05276 192 R--TEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLRS 266 (323)
T ss_pred C--chhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeeccc
Confidence 5 45666777776655 899999999974 477889999996 999999875432 123333333 4688988887654
Q ss_pred CCCC-------CcHHHHHHHHHcCCCCC
Q 018627 324 WKPK-------TDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 324 ~~~~-------~~~~~~~~~l~~g~i~~ 344 (353)
.... +.+.++++++.++++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (323)
T cd05276 267 RSLEEKAALAAAFREHVWPLFASGRIRP 294 (323)
T ss_pred hhhhccHHHHHHHHHHHHHHHHCCCccC
Confidence 3111 22467778888888864
No 105
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=4.2e-31 Score=234.02 Aligned_cols=262 Identities=20% Similarity=0.209 Sum_probs=216.2
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeC--CCCCCCCCCCeEEeecc
Q 018627 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVG--PGVTEFNEGEHVLTVFI 96 (353)
Q Consensus 25 l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG--~~~~~~~vGd~V~~~~~ 96 (353)
++++++++|+|++||||+|+.+.+++|. .+|++ -+|+-+|...+|.++... +....|++||-|...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec--
Confidence 9999999999999999999999999983 23332 678888887776666533 456789999999886
Q ss_pred cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh--hhhhhh
Q 018627 97 GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL--EKICLL 174 (353)
Q Consensus 97 ~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~--~~aa~l 174 (353)
.+|+||..++.+.+.|+.++.-+ .....+
T Consensus 101 -------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvL 131 (340)
T COG2130 101 -------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVL 131 (340)
T ss_pred -------------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhc
Confidence 28999999999999999764322 234566
Q ss_pred chhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccH
Q 018627 175 SCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPV 252 (353)
Q Consensus 175 ~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~ 252 (353)
..+..|||.+|.+..++++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+.+++ +|++.++||+ .+++
T Consensus 132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk--~~d~ 208 (340)
T COG2130 132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK--AEDF 208 (340)
T ss_pred CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecC--cccH
Confidence 6789999999999999999999999987 9999999999999999 99999999999999988 9999999998 5799
Q ss_pred HHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC------ceecchhhhhcCcEEEeeecCCCCC
Q 018627 253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP------EVAAHYGLFLSGRTLKGSLFGGWKP 326 (353)
Q Consensus 253 ~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (353)
.+.+++.++.++|++||++|+ ..++..+..|+.. +|++.+|.-.... .....+..+.+.+++.|+.....+.
T Consensus 209 ~~~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~ 286 (340)
T COG2130 209 AQALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD 286 (340)
T ss_pred HHHHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh
Confidence 999999999999999999998 6789999999995 9999999643311 1112233234588999998744332
Q ss_pred ---CCcHHHHHHHHHcCCCCCCC
Q 018627 327 ---KTDLPSLVNRYLKKVRNTRK 346 (353)
Q Consensus 327 ---~~~~~~~~~~l~~g~i~~~~ 346 (353)
.+-++++.+|+++|||+.++
T Consensus 287 ~~~~e~~~~l~~wv~~GKi~~~e 309 (340)
T COG2130 287 QRFPEALRELGGWVKEGKIQYRE 309 (340)
T ss_pred hhhHHHHHHHHHHHHcCceeeEe
Confidence 24567899999999998765
No 106
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=5.6e-31 Score=249.65 Aligned_cols=233 Identities=26% Similarity=0.327 Sum_probs=196.9
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhccC------------------CCCCcccccc
Q 018627 13 CKAAVAWGAGQP---LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQ------------------AIFPRIFGHE 70 (353)
Q Consensus 13 ~~a~~~~~~~~~---l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~g~------------------~~~p~~~G~e 70 (353)
|||+++++.+++ +++++++.|.|. ++||+|||+++++|++|...+.+. ..+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789998888775 899999999994 999999999999999999877652 2457799999
Q ss_pred eeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceee
Q 018627 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (353)
Q Consensus 71 ~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 150 (353)
++|+|+.+|+++.++++||||++.+... ..|+|++
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~---------------------------------------------~~g~~~~ 115 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPW---------------------------------------------SQGTHAE 115 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCC---------------------------------------------CCcccee
Confidence 9999999999999999999999863210 1258999
Q ss_pred eEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCC----CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc
Q 018627 151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISK----GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (353)
Q Consensus 151 ~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~----g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~ 225 (353)
|+.++++.++++|+++++++++.+++.+.++|+++.+...+.+ |++|+|+|+ |++|++++++|+++|+ +|+++.
T Consensus 116 ~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~ 194 (350)
T cd08248 116 YVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTC 194 (350)
T ss_pred EEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEe
Confidence 9999999999999999999999999999999999877666654 999999996 9999999999999999 788776
Q ss_pred CChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 226 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
++ ++.+.++++|++.+++.. ..++.+.+.. .+++|++||++|.. ....++++++++ |+++.+|...
T Consensus 195 ~~-~~~~~~~~~g~~~~~~~~--~~~~~~~l~~--~~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~ 260 (350)
T cd08248 195 ST-DAIPLVKSLGADDVIDYN--NEDFEEELTE--RGKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPL 260 (350)
T ss_pred Cc-chHHHHHHhCCceEEECC--ChhHHHHHHh--cCCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCc
Confidence 54 677888999998888765 3345554443 23799999999975 788999999996 9999998653
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.98 E-value=9.5e-30 Score=237.27 Aligned_cols=283 Identities=23% Similarity=0.310 Sum_probs=226.7
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
||++++...+.+ +.+.++|.|.+.+++|+|++.++++|++|+....+.. ..|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578887765543 8889999999999999999999999999998776643 4677899999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++.+.. .. + ..|++++|+.++++.++++|+++
T Consensus 81 ~Gd~v~~~~~~-------------------------~~---~---------------~~g~~~~~~~~~~~~~~~ip~~~ 117 (325)
T cd08253 81 VGDRVWLTNLG-------------------------WG---R---------------RQGTAAEYVVVPADQLVPLPDGV 117 (325)
T ss_pred CCCEEEEeccc-------------------------cC---C---------------CCcceeeEEEecHHHcEeCCCCC
Confidence 99999987311 00 0 02589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++++++.+++++.+||+++.+..++.+|++++|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++.
T Consensus 118 ~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (325)
T cd08253 118 SFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNY 196 (325)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999877788999999999997 9999999999999999 89999999999999999999888776
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 323 (353)
. ..++.+.+.+...+ ++|++++|++. ......+++++++ |+++.+|...... .+.... +.++.++.+.....
T Consensus 197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 270 (325)
T cd08253 197 R--AEDLADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLRG--TIPINPLMAKEASIRGVLLYT 270 (325)
T ss_pred C--CcCHHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCcC--CCChhHHHhcCceEEeeehhh
Confidence 5 45677777776665 89999999987 4577888999996 9999998754222 233333 34577777665332
Q ss_pred CCC---CCcHHHHHHHHHcCCCCCC
Q 018627 324 WKP---KTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 324 ~~~---~~~~~~~~~~l~~g~i~~~ 345 (353)
... .+.+.++.+++..+.+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~i~~~ 295 (325)
T cd08253 271 ATPEERAAAAEAIAAGLADGALRPV 295 (325)
T ss_pred cCHHHHHHHHHHHHHHHHCCCccCc
Confidence 211 1234456677778877643
No 108
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.98 E-value=1.7e-29 Score=234.93 Aligned_cols=278 Identities=26% Similarity=0.310 Sum_probs=226.4
Q ss_pred eEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (353)
Q Consensus 14 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd 89 (353)
+|+.+..++.+ +++.+.+.|.+.+++|+|||.++++|++|+....+.. .+|.++|||++|+|+.+|+++.++++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGD 80 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCCCCCccCCcceeEEEEEECCCCCCCCCCC
Confidence 46666655543 6777888778899999999999999999998877654 4567899999999999999999999999
Q ss_pred eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (353)
Q Consensus 90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~ 169 (353)
+|+++. ..|+|++|+.++.+.++++|+++++.
T Consensus 81 ~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~ 112 (320)
T cd05286 81 RVAYAG------------------------------------------------PPGAYAEYRVVPASRLVKLPDGISDE 112 (320)
T ss_pred EEEEec------------------------------------------------CCCceeEEEEecHHHceeCCCCCCHH
Confidence 999862 01489999999999999999999999
Q ss_pred hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (353)
Q Consensus 170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~ 248 (353)
+++.+...+.++++++.+..++.+|++|||+|+ |++|++++++++++|+ .|+++.+++++.+.++++|++.+++..
T Consensus 113 ~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~-- 189 (320)
T cd05286 113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR-- 189 (320)
T ss_pred HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--
Confidence 999998899999999878888999999999996 9999999999999999 899998999999999999998888765
Q ss_pred CccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCC-
Q 018627 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWK- 325 (353)
Q Consensus 249 ~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~- 325 (353)
..++.+.+...+.+ ++|++|+|+++ .....++++++++ |+++.+|..... ...++...+ .+++++.+.....+.
T Consensus 190 ~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (320)
T cd05286 190 DEDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIA 266 (320)
T ss_pred chhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcC
Confidence 45677777777665 89999999997 5788999999997 999999875542 222333333 468887655433222
Q ss_pred CC----CcHHHHHHHHHcCCCCCC
Q 018627 326 PK----TDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 326 ~~----~~~~~~~~~l~~g~i~~~ 345 (353)
.. +.+.++++++.++++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~ 290 (320)
T cd05286 267 TREELLARAAELFDAVASGKLKVE 290 (320)
T ss_pred CHHHHHHHHHHHHHHHHCCCCcCc
Confidence 11 234578889999988754
No 109
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=1.3e-30 Score=244.42 Aligned_cols=271 Identities=29% Similarity=0.385 Sum_probs=197.2
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-------CCcccccceeEE---EEEeC-CCCCCCCCCCeEEe
Q 018627 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI-------FPRIFGHEASGI---VESVG-PGVTEFNEGEHVLT 93 (353)
Q Consensus 25 l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~-------~p~~~G~e~~G~---V~~vG-~~~~~~~vGd~V~~ 93 (353)
...++.|.|.|++++++|++.++++|+.|+.++.|... +|.+++.++.|+ +...| ..+..+..||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 55678899999999999999999999999999888862 333333333333 33333 22233444554443
Q ss_pred ecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhh
Q 018627 94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 173 (353)
Q Consensus 94 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~ 173 (353)
.. ..|+|+||..+|...++++|+++++++||+
T Consensus 100 ~~------------------------------------------------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~ 131 (347)
T KOG1198|consen 100 FL------------------------------------------------SSGGLAEYVVVPEKLLVKIPESLSFEEAAA 131 (347)
T ss_pred cc------------------------------------------------CCCceeeEEEcchhhccCCCCccChhhhhc
Confidence 31 126999999999999999999999999999
Q ss_pred hchhhhHHHHHHHHhc------cCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 174 LSCGLSAGLGAAWNVA------DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 174 l~~~~~ta~~al~~~~------~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
++.++.|||.+++... +.++|++|||+|+ |++|++++|+|++.++ ..+++.+++++.++++++|+++++||+
T Consensus 132 ~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~ 210 (347)
T KOG1198|consen 132 LPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYK 210 (347)
T ss_pred CchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCC
Confidence 9999999999999988 8999999999987 8999999999999996 455555899999999999999999998
Q ss_pred CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-Cceecc-hhhhhcCc-----EEEee
Q 018627 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAH-YGLFLSGR-----TLKGS 319 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~-~~~~~~~~-----~i~g~ 319 (353)
++++.+.+++.+.++||+||||+|++ .....+.++... |+...++..... ...... .......+ .+.+.
T Consensus 211 --~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
T KOG1198|consen 211 --DENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGV 286 (347)
T ss_pred --CHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeecc
Confidence 68899999988855999999999984 566777777775 764444433220 111111 00001111 11111
Q ss_pred ec---CCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627 320 LF---GGWKPKTDLPSLVNRYLKKVRNTRKPS 348 (353)
Q Consensus 320 ~~---~~~~~~~~~~~~~~~l~~g~i~~~~li 348 (353)
.+ ......+.+..+.++++.|+|++..-.
T Consensus 287 ~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~ 318 (347)
T KOG1198|consen 287 NYRWLYFVPSAEYLKALVELIEKGKIKPVIDS 318 (347)
T ss_pred ceeeeeecCCHHHHHHHHHHHHcCcccCCcce
Confidence 10 011123678899999999988875433
No 110
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.97 E-value=1.6e-29 Score=237.02 Aligned_cols=280 Identities=15% Similarity=0.172 Sum_probs=217.9
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++.+++. .+++++.|.|+|+++||+||+.++++|++|...+.+.. .+|.++|||++|+|+. +++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999988775 39999999999999999999999999999998876653 3478899999999998 6777899
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++..... | . ...|+|++|++++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~~--------------~---------~-------------------~~~g~~~~~~~v~~~~~~~lp~~~ 116 (324)
T cd08288 79 PGDRVVLTGWGV--------------G---------E-------------------RHWGGYAQRARVKADWLVPLPEGL 116 (324)
T ss_pred CCCEEEECCccC--------------C---------C-------------------CCCCcceeEEEEchHHeeeCCCCC
Confidence 999999862100 0 0 012589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHH--HhccCC-CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627 167 PLEKICLLSCGLSAGLGAAW--NVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~--~~~~~~-~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~ 242 (353)
++++++.++..+++++.++. +..... ++++|||+|+ |++|++++|+|+++|+ +|+++..++++.+.++++|++.+
T Consensus 117 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 195 (324)
T cd08288 117 SARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEI 195 (324)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEE
Confidence 99999999999999987753 123445 6789999998 9999999999999999 78888889999999999999888
Q ss_pred eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeec
Q 018627 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (353)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (353)
+++.+ +...++.+..+++|.+||++++ ..+...+..++.+ |+++.+|.... .........+ .+++++.+...
T Consensus 196 ~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08288 196 IDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDS 268 (324)
T ss_pred EEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEe
Confidence 87752 2224555555578999999987 4577888889986 99999997532 2222333334 56889888754
Q ss_pred CCCCC---CCcHHHHHHHHHcCCCCC
Q 018627 322 GGWKP---KTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 322 ~~~~~---~~~~~~~~~~l~~g~i~~ 344 (353)
..... .+.+..+.+++..+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (324)
T cd08288 269 VMAPIERRRAAWARLARDLDPALLEA 294 (324)
T ss_pred ecccchhhHHHHHHHHHHHhcCCccc
Confidence 33221 123556677787887754
No 111
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.5e-29 Score=236.35 Aligned_cols=278 Identities=23% Similarity=0.270 Sum_probs=226.5
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+++..++.+ +++++.+.|.+.+++|+|++.++++|++|.....+.. ..|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999887765 8888888888999999999999999999998876653 2377899999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|+++... .. + ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~-------------------------~~---~---------------~~g~~~~~~~v~~~~~~~~p~~~ 117 (326)
T cd08272 81 VGDEVYGCAGG-------------------------LG---G---------------LQGSLAEYAVVDARLLALKPANL 117 (326)
T ss_pred CCCEEEEccCC-------------------------cC---C---------------CCCceeEEEEecHHHcccCCCCC
Confidence 99999986310 00 0 12589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++.+++.++..+.+||+++.+..++.+|++++|+|+ |.+|++++++++.+|+ +|+++.++ ++.+.++++|++.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~ 195 (326)
T cd08272 118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYY 195 (326)
T ss_pred CHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEec
Confidence 999999999999999999878889999999999986 9999999999999999 88888887 88888999999887776
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC-
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG- 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~- 323 (353)
. .. +.+.+...+++ ++|+++|++++ ..+..++.+++++ |+++.+|... ..++... ..+++++.+.....
T Consensus 196 ~--~~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~ 266 (326)
T cd08272 196 R--ET-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFTLLP 266 (326)
T ss_pred c--hh-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEcccc
Confidence 5 34 67777777766 89999999997 5678899999996 9999998663 2222232 24677777665432
Q ss_pred -CC------CCCcHHHHHHHHHcCCCCC
Q 018627 324 -WK------PKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 324 -~~------~~~~~~~~~~~l~~g~i~~ 344 (353)
.. ..+.+..+++++.++++.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 294 (326)
T cd08272 267 LLTGEGRAHHGEILREAARLVERGQLRP 294 (326)
T ss_pred cccccchhhHHHHHHHHHHHHHCCCccc
Confidence 10 1245778888998998764
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.7e-29 Score=236.31 Aligned_cols=280 Identities=25% Similarity=0.272 Sum_probs=221.4
Q ss_pred eeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (353)
Q Consensus 13 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v 87 (353)
|||+++.+++ ..++++++|.|++.+++|+||+.++++|++|+....+.. .+|.++|||++|+|+.+|+++..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7899999888 359999999999999999999999999999988776654 33678999999999999999999999
Q ss_pred CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
||+|++.+... ..|+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~---------------------------------------------~~~~~~s~~~~~~~~~~~ip~~~~ 115 (325)
T cd08271 81 GDRVAYHASLA---------------------------------------------RGGSFAEYTVVDARAVLPLPDSLS 115 (325)
T ss_pred CCEEEeccCCC---------------------------------------------CCccceeEEEeCHHHeEECCCCCC
Confidence 99999863110 014899999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
+.+++.+.+.+.++++++.+...+.+|++++|+|+ |.+|+++++++++.|+ .|+.+. ++++.+.++++|++.+++..
T Consensus 116 ~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~ 193 (325)
T cd08271 116 FEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYN 193 (325)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCC
Confidence 99999999999999999888888999999999998 7899999999999999 777775 67788888889998888765
Q ss_pred CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchh---hhhcCcEEEeeecC
Q 018627 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG---LFLSGRTLKGSLFG 322 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~i~g~~~~ 322 (353)
...+.+.++...++ ++|++++++++. .....+++++++ |+++.++...... ..... ..++++.+......
T Consensus 194 --~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd08271 194 --DEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDAS--PDPPFTRALSVHEVALGAAHDH 267 (325)
T ss_pred --CccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCc--chhHHhhcceEEEEEecccccc
Confidence 44566777777665 899999999974 456789999996 9999997543311 11111 01223333322211
Q ss_pred CC-----CCCCcHHHHHHHHHcCCCCCC
Q 018627 323 GW-----KPKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 323 ~~-----~~~~~~~~~~~~l~~g~i~~~ 345 (353)
.. ...+.+.++++++.++++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 295 (325)
T cd08271 268 GDPAAWQDLRYAGEELLELLAAGKLEPL 295 (325)
T ss_pred cchhhHHHHHHHHHHHHHHHHCCCeeec
Confidence 11 111345678899999988654
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.9e-29 Score=237.13 Aligned_cols=275 Identities=21% Similarity=0.266 Sum_probs=215.6
Q ss_pred eEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (353)
Q Consensus 14 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v 87 (353)
||+++...+.+ +++++.+.|.|.++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+.+|+++..|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 68888877654 8899999999999999999999999999998877654 34678999999999999999999999
Q ss_pred CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
||+|++.+. .|+|++|+.++.+.++++|++++
T Consensus 82 Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~ 113 (331)
T cd08273 82 GDRVAALTR------------------------------------------------VGGNAEYINLDAKYLVPVPEGVD 113 (331)
T ss_pred CCEEEEeCC------------------------------------------------CcceeeEEEechHHeEECCCCCC
Confidence 999998731 14899999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~ 246 (353)
+++++.+++++.+||+++.+..++.+|++++|+|+ |++|++++++|+.+|+ +|+++.+ +++.+.++++|+.. ++..
T Consensus 114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~ 190 (331)
T cd08273 114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR 190 (331)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC
Confidence 99999999999999999877788999999999997 9999999999999999 8888877 88888989999754 3433
Q ss_pred CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecc--hh-----------hhhc-
Q 018627 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH--YG-----------LFLS- 312 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~~-----------~~~~- 312 (353)
..++.+. ....+++|++++|+++.. +..++++++++ |+++.+|.........+. +. ....
T Consensus 191 --~~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (331)
T cd08273 191 --TKDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTG 264 (331)
T ss_pred --Ccchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceecc
Confidence 2333333 233358999999999854 88999999996 999999976543221111 10 0111
Q ss_pred -CcEEEeeecCCC-C---CCCcHHHHHHHHHcCCCCCC
Q 018627 313 -GRTLKGSLFGGW-K---PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 313 -~~~i~g~~~~~~-~---~~~~~~~~~~~l~~g~i~~~ 345 (353)
+.++........ . ..+.+.++++++++|.+.+.
T Consensus 265 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~ 302 (331)
T cd08273 265 RRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK 302 (331)
T ss_pred ceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC
Confidence 333322222110 0 12567789999999988753
No 114
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=8.9e-29 Score=230.90 Aligned_cols=278 Identities=24% Similarity=0.317 Sum_probs=226.7
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|+|+.+..++.+ +++.+.+.|.+++++|+||+.++++|++|+..+.+.. .+|.++|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 678888776654 6777777777899999999999999999988876643 2457999999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++... .|+|++|+.++...++++|+++
T Consensus 81 ~Gd~V~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~ 112 (325)
T TIGR02824 81 VGDRVCALVA------------------------------------------------GGGYAEYVAVPAGQVLPVPEGL 112 (325)
T ss_pred CCCEEEEccC------------------------------------------------CCcceeEEEecHHHcEeCCCCC
Confidence 9999988621 1489999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++.+++.+..++.++|+++.+...+.++++++|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
T TIGR02824 113 SLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINY 191 (325)
T ss_pred CHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999999878889999999999997 9999999999999999 88888889999998889998777766
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (353)
. ..++.+.++...++ ++|++++++|. ......+.+++++ |+++.+|....... .++...+ .+++++.+.....
T Consensus 192 ~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T TIGR02824 192 R--EEDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRA 266 (325)
T ss_pred C--chhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhh
Confidence 4 45566777776665 89999999987 4678899999996 99999987543222 3334333 5699998887554
Q ss_pred CCC-------CCcHHHHHHHHHcCCCCC
Q 018627 324 WKP-------KTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 324 ~~~-------~~~~~~~~~~l~~g~i~~ 344 (353)
... ...+.+++++++++++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (325)
T TIGR02824 267 RPVAEKAAIAAELREHVWPLLASGRVRP 294 (325)
T ss_pred cchhhhHHHHHHHHHHHHHHHHCCcccC
Confidence 211 112356778888888764
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.7e-28 Score=229.24 Aligned_cols=284 Identities=24% Similarity=0.339 Sum_probs=225.4
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (353)
|||+.+.+.+.+ +++.+.+.|.+++++|+|||.++++|+.|.....+.. .+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 678888776543 7788888888999999999999999999988766543 3477899999999999999999999
Q ss_pred CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (353)
Q Consensus 87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l 166 (353)
+||+|++++...+ ...|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~ 117 (328)
T cd08268 81 VGDRVSVIPAADL-------------------------------------------GQYGTYAEYALVPAAAVVKLPDGL 117 (328)
T ss_pred CCCEEEecccccc-------------------------------------------CCCccceEEEEechHhcEeCCCCC
Confidence 9999998742110 012589999999999999999999
Q ss_pred ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
++++++.+.+++.++|.++.+...+.++++++|+|+ |.+|++++++++..|+ +++.+.+++++.+.++++|++.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (328)
T cd08268 118 SFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVT 196 (328)
T ss_pred CHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEec
Confidence 999999999999999999877888999999999997 9999999999999999 88888889999999988998888776
Q ss_pred CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchh-hhhcCcEEEeeecCC
Q 018627 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGG 323 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 323 (353)
. ...+.+.+.....+ ++|++++++++ .....++++++++ |+++.+|.... ....+... .+.+++++.+.....
T Consensus 197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 271 (328)
T cd08268 197 D--EEDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLDE 271 (328)
T ss_pred C--CccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEeccc
Confidence 5 45666677776665 89999999998 5678889999996 99999986543 21222322 245688887765443
Q ss_pred CC-CCCc----HHHHHHHHHcCCCCCC
Q 018627 324 WK-PKTD----LPSLVNRYLKKVRNTR 345 (353)
Q Consensus 324 ~~-~~~~----~~~~~~~l~~g~i~~~ 345 (353)
.. ..++ +..+..++.++++.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (328)
T cd08268 272 ITLDPEARRRAIAFILDGLASGALKPV 298 (328)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcCC
Confidence 11 1123 3344455667776643
No 116
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=8e-29 Score=235.34 Aligned_cols=237 Identities=20% Similarity=0.327 Sum_probs=192.4
Q ss_pred eEEEEecCCCCeEEEEeecCCC---CCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC-CC
Q 018627 14 KAAVAWGAGQPLVVEEVEVNPP---QPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT-EF 85 (353)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~---~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~-~~ 85 (353)
|++++.+++.++++++++.|.| .+++|+||+.++++|++|+..+.+.. ..|.++|+|++|+|+++|+++. .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888888887776 89999999999999999988765432 1377899999999999999998 89
Q ss_pred CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC----ceEE
Q 018627 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG----CAVK 161 (353)
Q Consensus 86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~----~v~~ 161 (353)
++||+|++.....|+ ..|+|++|++++.. .+++
T Consensus 82 ~~Gd~V~~~~~~~~~-------------------------------------------~~g~~~~~~~v~~~~~~~~~~~ 118 (352)
T cd08247 82 KVGDEVCGIYPHPYG-------------------------------------------GQGTLSQYLLVDPKKDKKSITR 118 (352)
T ss_pred CCCCEEEEeecCCCC-------------------------------------------CCceeeEEEEEccccccceeEE
Confidence 999999987322110 12589999999987 7899
Q ss_pred CCCCCChhhhhhhchhhhHHHHHHHHhc-cCCCCCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhCC
Q 018627 162 VSSIAPLEKICLLSCGLSAGLGAAWNVA-DISKGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFG 238 (353)
Q Consensus 162 iP~~l~~~~aa~l~~~~~ta~~al~~~~-~~~~g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~G 238 (353)
+|+++++++++.+++.+.|||+++.+.. ++++|++|||+|+ +.+|++++++|++++ .+.++++. ++++.+.++++|
T Consensus 119 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g 197 (352)
T cd08247 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLG 197 (352)
T ss_pred CCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhC
Confidence 9999999999999999999999987766 7999999999998 789999999999984 43677775 455566778899
Q ss_pred CceEeCCCCCCc--cHHHHHHHHh-cCCccEEEeccCChHHHHHHHHHhc---cCCceEEEEc
Q 018627 239 VTEFLNPNDNNE--PVQQVIKRIT-DGGADYSFECIGDTGMITTALQSCC---DGWGLAVTLG 295 (353)
Q Consensus 239 ~~~~~~~~~~~~--~~~~~~~~~~-~~~~dvv~d~~g~~~~~~~~~~~l~---~~~G~~v~~g 295 (353)
++.+++..+... .+.+.++... ++++|++|||+|+......++++++ ++ |+++.++
T Consensus 198 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~ 259 (352)
T cd08247 198 ADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIV 259 (352)
T ss_pred CCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEe
Confidence 988887652110 2334444444 3499999999998667888899999 96 9999875
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=1.4e-28 Score=227.42 Aligned_cols=262 Identities=24% Similarity=0.335 Sum_probs=211.4
Q ss_pred cCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCccccc
Q 018627 32 VNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKS 107 (353)
Q Consensus 32 ~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~ 107 (353)
.|++.+++|+||+.++++|+.|+....+.+ .+|.++|+|++|+|+++|+++.++++||+|+++...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 577899999999999999999998877653 357799999999999999999999999999987311
Q ss_pred CCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHH
Q 018627 108 DKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187 (353)
Q Consensus 108 g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~ 187 (353)
..|+|++|+.++++.++++|+++++++++.++..+.+||+++ +
T Consensus 72 ------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~ 114 (303)
T cd08251 72 ------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-A 114 (303)
T ss_pred ------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-H
Confidence 124899999999999999999999999999999999999997 5
Q ss_pred hccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-Ccc
Q 018627 188 VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GAD 265 (353)
Q Consensus 188 ~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~d 265 (353)
...+++|++++|+++ |.+|++++++++++|+ +|+++.+++++.+.++++|++.+++.. ..++.+.+...+++ ++|
T Consensus 115 ~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~~~d 191 (303)
T cd08251 115 RAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLTGGRGVD 191 (303)
T ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHcCCCCce
Confidence 788999999999976 9999999999999999 899998999999999999998888775 45677778777776 899
Q ss_pred EEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC------CCCcHHHHHHHHHc
Q 018627 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK------PKTDLPSLVNRYLK 339 (353)
Q Consensus 266 vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~l~~ 339 (353)
+++|++++ ......+++++++ |+++.+|.........+....+.++..+......... ..+.+.++++++.+
T Consensus 192 ~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (303)
T cd08251 192 VVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEE 269 (303)
T ss_pred EEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHC
Confidence 99999975 6778889999996 9999998754322222333333345444333221111 11346678889999
Q ss_pred CCCCCC
Q 018627 340 KVRNTR 345 (353)
Q Consensus 340 g~i~~~ 345 (353)
|++++.
T Consensus 270 g~~~~~ 275 (303)
T cd08251 270 GELRPT 275 (303)
T ss_pred CCccCC
Confidence 987653
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=5.6e-28 Score=225.11 Aligned_cols=277 Identities=28% Similarity=0.430 Sum_probs=225.8
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~ 85 (353)
|+|+++..++.+ +++.+.+ |.+. +++|+|++.++++|++|+..+.+.. .+|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 678888754432 7777777 7766 4999999999999999998876654 236689999999999999999899
Q ss_pred CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (353)
Q Consensus 86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~ 165 (353)
++||+|++++. + |+|++|+.++.+.++++|++
T Consensus 80 ~~G~~V~~~~~------------------------------~------------------~~~~~~~~~~~~~~~~ip~~ 111 (323)
T cd08241 80 KVGDRVVALTG------------------------------Q------------------GGFAEEVVVPAAAVFPLPDG 111 (323)
T ss_pred CCCCEEEEecC------------------------------C------------------ceeEEEEEcCHHHceeCCCC
Confidence 99999998720 1 48999999999999999999
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~ 244 (353)
+++.+++.+...+.+|+.++.+...+.++++|+|+|+ |.+|++++++++..|+ .|+.+++++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd08241 112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID 190 (323)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeee
Confidence 9999998888899999999877788999999999998 9999999999999999 7999989999999999999887776
Q ss_pred CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hhhhcCcEEEeeecC
Q 018627 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFG 322 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~ 322 (353)
.. ..++.+.++..+++ ++|.+++++|. .....++++++++ |+++.+|....... .+.. ..+.+++++.+....
T Consensus 191 ~~--~~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd08241 191 YR--DPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYWG 265 (323)
T ss_pred cC--CccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEecc
Confidence 65 45677778877766 89999999997 6778899999996 99999987543221 1122 224568888887655
Q ss_pred CCCC------CCcHHHHHHHHHcCCCCC
Q 018627 323 GWKP------KTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 323 ~~~~------~~~~~~~~~~l~~g~i~~ 344 (353)
.+.. .+.+.++++++.++++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (323)
T cd08241 266 AYARREPELLRANLAELFDLLAEGKIRP 293 (323)
T ss_pred cccchhHHHHHHHHHHHHHHHHCCCccc
Confidence 4321 145678889999998754
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.97 E-value=2e-28 Score=226.86 Aligned_cols=271 Identities=24% Similarity=0.334 Sum_probs=217.1
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (353)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~ 84 (353)
|+|+++..++.. +++++.+.|.++++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678998877653 5677888888999999999999999999998876642 34789999999999999999999
Q ss_pred CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (353)
Q Consensus 85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~ 164 (353)
+++||+|++++... ..|+|++|+.++...++++|+
T Consensus 81 ~~~G~~V~~~~~~~---------------------------------------------~~g~~~~~~~~~~~~~~~~p~ 115 (309)
T cd05289 81 FKVGDEVFGMTPFT---------------------------------------------RGGAYAEYVVVPADELALKPA 115 (309)
T ss_pred CCCCCEEEEccCCC---------------------------------------------CCCcceeEEEecHHHhccCCC
Confidence 99999999873110 014899999999999999999
Q ss_pred CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (353)
Q Consensus 165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~ 243 (353)
++++.+++.+++.+.++++++.+...+.+|++|||+|+ |.+|++++++++..|+ +|+++.+++ +.+.++++|++.++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~ 193 (309)
T cd05289 116 NLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVI 193 (309)
T ss_pred CCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEE
Confidence 99999999999999999999877777999999999997 9999999999999999 788887777 88888889987777
Q ss_pred CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC
Q 018627 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (353)
+.. ..++.+ ....+++|++|+++++. ....++++++++ |+++.+|....... ..+.+++.+.......
T Consensus 194 ~~~--~~~~~~---~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~ 261 (309)
T cd05289 194 DYT--KGDFER---AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVEP 261 (309)
T ss_pred eCC--CCchhh---ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEecc
Confidence 665 223332 22223899999999974 788999999996 99999987544211 2233466665554322
Q ss_pred CCCCCcHHHHHHHHHcCCCCC
Q 018627 324 WKPKTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 324 ~~~~~~~~~~~~~l~~g~i~~ 344 (353)
. .+.+.+++++++++++++
T Consensus 262 ~--~~~~~~~~~~~~~~~~~~ 280 (309)
T cd05289 262 D--GEQLAELAELVEAGKLRP 280 (309)
T ss_pred c--HHHHHHHHHHHHCCCEEE
Confidence 1 457888999999888754
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.1e-27 Score=222.08 Aligned_cols=278 Identities=22% Similarity=0.320 Sum_probs=218.6
Q ss_pred eEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627 14 KAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (353)
Q Consensus 14 ~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v 87 (353)
||+++...+. .+.+.+.+.|++.+++|+||+.++++|++|...+.+.. ..|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4566665554 37788888888999999999999999999998877654 23678999999999999999999999
Q ss_pred CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (353)
Q Consensus 88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~ 167 (353)
||+|+++.. .|+|++|+.++.+.++++|++++
T Consensus 81 G~~V~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~~ 112 (337)
T cd08275 81 GDRVMGLTR------------------------------------------------FGGYAEVVNVPADQVFPLPDGMS 112 (337)
T ss_pred CCEEEEecC------------------------------------------------CCeeeeEEEecHHHeEECCCCCC
Confidence 999998721 14899999999999999999999
Q ss_pred hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+.+++.+.+++.++|+++.+...+++|++|+|+|+ |.+|++++++|+++ +. .++.. .++++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~ 190 (337)
T cd08275 113 FEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDY 190 (337)
T ss_pred HHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeC
Confidence 99999999999999999888888999999999998 99999999999998 43 33333 34557788888999888776
Q ss_pred CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC--ce-------------ecc-hhh
Q 018627 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EV-------------AAH-YGL 309 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~-------------~~~-~~~ 309 (353)
. ..++.+.++..+++++|+++||+|+ .....++++++++ |+++.+|...... .+ ... ...
T Consensus 191 ~--~~~~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (337)
T cd08275 191 R--TQDYVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKL 266 (337)
T ss_pred C--CCcHHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHH
Confidence 5 4567777777765689999999997 4678889999997 9999998654311 11 111 122
Q ss_pred hhcCcEEEeeecCCCCCC-----CcHHHHHHHHHcCCCCCC
Q 018627 310 FLSGRTLKGSLFGGWKPK-----TDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 310 ~~~~~~i~g~~~~~~~~~-----~~~~~~~~~l~~g~i~~~ 345 (353)
+.+++++.++........ ..+.++++++.++++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (337)
T cd08275 267 ISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK 307 (337)
T ss_pred hhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc
Confidence 345888888765422111 236678888989987654
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1e-27 Score=223.72 Aligned_cols=264 Identities=26% Similarity=0.295 Sum_probs=204.3
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCC
Q 018627 26 VVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99 (353)
Q Consensus 26 ~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c 99 (353)
++++.|.|.++++||+||+.++++|++|...+.+.. .+|.++|||++|+|+++|+++.++++||+|++.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 788999999999999999999999999998877653 2577899999999999999999999999998873210
Q ss_pred CCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhh
Q 018627 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179 (353)
Q Consensus 100 ~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ 179 (353)
..|+|++|+.++.+.++++|+++++++++.+++++.
T Consensus 94 --------------------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 129 (319)
T cd08267 94 --------------------------------------------GGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL 129 (319)
T ss_pred --------------------------------------------CCceeeEEEEechhheEECCCCCCHHHHHhhhhHHH
Confidence 024899999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHH
Q 018627 180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (353)
Q Consensus 180 ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 258 (353)
+||+++.+...+++|++|+|+|+ |++|++++++|+.+|+ +|+++.++ ++.+.++++|++.+++... .++. ..
T Consensus 130 ~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~ 202 (319)
T cd08267 130 TALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---AL 202 (319)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hh
Confidence 99999877777999999999997 9999999999999999 88888765 7888889999988877652 2332 33
Q ss_pred HhcC-CccEEEeccCCh-HHHHHHHHHhccCCceEEEEcCCCCCCceec---chhhhhcCcEEEeeecCCCCCCCcHHHH
Q 018627 259 ITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAA---HYGLFLSGRTLKGSLFGGWKPKTDLPSL 333 (353)
Q Consensus 259 ~~~~-~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 333 (353)
...+ ++|++++|+++. ......+..++++ |+++.+|.......... ..........+....... ..+.+.++
T Consensus 203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 279 (319)
T cd08267 203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQL 279 (319)
T ss_pred ccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHHH
Confidence 3344 899999999842 2333344448996 99999997654222221 111112223332222221 15678899
Q ss_pred HHHHHcCCCCC
Q 018627 334 VNRYLKKVRNT 344 (353)
Q Consensus 334 ~~~l~~g~i~~ 344 (353)
++++.++++++
T Consensus 280 ~~~l~~~~~~~ 290 (319)
T cd08267 280 AELVEEGKLKP 290 (319)
T ss_pred HHHHHCCCeee
Confidence 99999998764
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=1.5e-27 Score=218.62 Aligned_cols=253 Identities=21% Similarity=0.270 Sum_probs=207.2
Q ss_pred CeEEEEEeeeecchhhhhhhccCC-CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccc
Q 018627 38 EEIRIKVVCTSLCRSDITAWETQA-IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL 116 (353)
Q Consensus 38 ~eVlVrv~~~~i~~~D~~~~~g~~-~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~ 116 (353)
+||+||+.++++|++|++...+.. .+|.++|||++|+|+.+|+++..+++||+|+++.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCCCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe---------------------
Confidence 589999999999999999887754 4688999999999999999999999999999862
Q ss_pred cccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCE
Q 018627 117 GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGST 196 (353)
Q Consensus 117 ~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~ 196 (353)
.|+|+||+.++.+.++++|+++++.+++.+.+++.+++.++.+...+++|++
T Consensus 60 ----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~ 111 (293)
T cd05195 60 ----------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGES 111 (293)
T ss_pred ----------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCE
Confidence 1489999999999999999999999999998999999999878888999999
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC--CceEeCCCCCCccHHHHHHHHhcC-CccEEEeccC
Q 018627 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272 (353)
Q Consensus 197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g 272 (353)
|+|+|+ |.+|++++++++.+|+ +++++.+++++.+.++++| ++.+++.. ..++.+.++..+.+ ++|++++++|
T Consensus 112 vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~ 188 (293)
T cd05195 112 VLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRATGGRGVDVVLNSLS 188 (293)
T ss_pred EEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHhCCCCceEEEeCCC
Confidence 999986 9999999999999999 8999988889999998888 67777665 45677778877766 8999999999
Q ss_pred ChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC--C----CCcHHHHHHHHHcCCCCC
Q 018627 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK--P----KTDLPSLVNRYLKKVRNT 344 (353)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~--~----~~~~~~~~~~l~~g~i~~ 344 (353)
+. .+..++++++++ |+++.+|.........+....+.+++.+.......+. . .+.+.+++++++++++++
T Consensus 189 ~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (293)
T cd05195 189 GE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKP 264 (293)
T ss_pred ch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCccc
Confidence 85 788999999996 9999998765422122233333346666554433221 0 134678889999998764
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=3.7e-27 Score=215.87 Aligned_cols=250 Identities=20% Similarity=0.306 Sum_probs=204.8
Q ss_pred EEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCccccccccc
Q 018627 42 IKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121 (353)
Q Consensus 42 Vrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~ 121 (353)
||+.++++|++|++.+.+.+..|.++|||++|+|+.+|+++..+++||+|++..
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-------------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-------------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc--------------------------
Confidence 899999999999998888766678999999999999999999999999999862
Q ss_pred ccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEc
Q 018627 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG 201 (353)
Q Consensus 122 g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~G 201 (353)
.|+|++|+.++.+.++++|+++++.+++.+.+.+.+++.++.+...+.+|++|+|+|
T Consensus 56 -----------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g 112 (288)
T smart00829 56 -----------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHA 112 (288)
T ss_pred -----------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEec
Confidence 148999999999999999999999999999999999999987878899999999998
Q ss_pred C-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC--ceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHH
Q 018627 202 L-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMI 277 (353)
Q Consensus 202 a-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~--~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~ 277 (353)
+ |.+|+++++++++.|+ +|+++.+++++.+.++++|+ +.++++. ..++.+.+....++ ++|+++|++++ ...
T Consensus 113 ~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~ 188 (288)
T smart00829 113 AAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRATGGRGVDVVLNSLAG-EFL 188 (288)
T ss_pred CCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHhCCCCcEEEEeCCCH-HHH
Confidence 6 9999999999999999 89999899999999999998 6677665 45677777777666 89999999986 678
Q ss_pred HHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC-----CCCcHHHHHHHHHcCCCCCC
Q 018627 278 TTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK-----PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 278 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~l~~g~i~~~ 345 (353)
..+++.++++ |+++.+|.........+....+.+++++.+.....+. ..+.+.+++++++++++++.
T Consensus 189 ~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T smart00829 189 DASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL 260 (288)
T ss_pred HHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc
Confidence 8899999996 9999999754221222233333456666555432211 11346678888988988653
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=2.6e-24 Score=190.31 Aligned_cols=278 Identities=22% Similarity=0.239 Sum_probs=208.9
Q ss_pred eeeEEEEec--CCCC----eEE--EEee-cCCCCCCeEEEEEeeeecchhhhhhhccC----CCCCcccc----cceeEE
Q 018627 12 TCKAAVAWG--AGQP----LVV--EEVE-VNPPQPEEIRIKVVCTSLCRSDITAWETQ----AIFPRIFG----HEASGI 74 (353)
Q Consensus 12 ~~~a~~~~~--~~~~----l~~--~~~~-~p~~~~~eVlVrv~~~~i~~~D~~~~~g~----~~~p~~~G----~e~~G~ 74 (353)
+.++|++.. ++-| +.+ .+.+ ..++++++||||..+.+.+|.-....... +-.|+.+| ...+|+
T Consensus 3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~k 82 (343)
T KOG1196|consen 3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAK 82 (343)
T ss_pred cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEE
Confidence 356677654 2222 443 3444 34578899999999999998643322111 13344444 367889
Q ss_pred EEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEE
Q 018627 75 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154 (353)
Q Consensus 75 V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~ 154 (353)
|++. +..++++||.|.+.. +|.||.++
T Consensus 83 Vi~S--~~~~~~~GD~v~g~~---------------------------------------------------gWeeysii 109 (343)
T KOG1196|consen 83 VIDS--GHPNYKKGDLVWGIV---------------------------------------------------GWEEYSVI 109 (343)
T ss_pred EEec--CCCCCCcCceEEEec---------------------------------------------------cceEEEEe
Confidence 9885 457899999998872 79999999
Q ss_pred eCC--ceEECC--CCCChhhh-hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 155 HSG--CAVKVS--SIAPLEKI-CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 155 ~~~--~v~~iP--~~l~~~~a-a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
+++ ..+++| .+.++... ..+..+..|||..+.+...++.|++|+|-|| |.+|+.+.|+|+.+|+ .|+++..++
T Consensus 110 ~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~ 188 (343)
T KOG1196|consen 110 TPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSK 188 (343)
T ss_pred cCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCCh
Confidence 765 344544 34555543 5566788999999999999999999999987 9999999999999999 999999999
Q ss_pred hhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC---Ccee
Q 018627 229 EKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVA 304 (353)
Q Consensus 229 ~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~ 304 (353)
+|.++++. +|.+..+||++ +.+..+++++..++++|+.||++|+ ..++..+..|+.. ||++.+|.-... .+..
T Consensus 189 EKv~ll~~~~G~d~afNYK~-e~~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~ 265 (343)
T KOG1196|consen 189 EKVDLLKTKFGFDDAFNYKE-ESDLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEG 265 (343)
T ss_pred hhhhhhHhccCCccceeccC-ccCHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCcc
Confidence 99998855 79999999984 5589999999888899999999998 6789999999996 999999975431 1112
Q ss_pred cc--hhhhhcCcEEEeeecCCCCCC--CcHHHHHHHHHcCCCCCCC
Q 018627 305 AH--YGLFLSGRTLKGSLFGGWKPK--TDLPSLVNRYLKKVRNTRK 346 (353)
Q Consensus 305 ~~--~~~~~~~~~i~g~~~~~~~~~--~~~~~~~~~l~~g~i~~~~ 346 (353)
+. ...+.+++++.|+....+.++ +-++.+..++++|||+..+
T Consensus 266 ~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e 311 (343)
T KOG1196|consen 266 LHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE 311 (343)
T ss_pred ccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence 21 233467888888776665433 3457888999999998543
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=1.7e-24 Score=198.65 Aligned_cols=219 Identities=28% Similarity=0.341 Sum_probs=176.7
Q ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCcccc
Q 018627 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYH 141 (353)
Q Consensus 62 ~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~ 141 (353)
++|.++|||++|+|+++|+++.++++||+|+++
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 788999999999999999999999999999986
Q ss_pred ccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeE
Q 018627 142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221 (353)
Q Consensus 142 ~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~v 221 (353)
+.|++|++++.+.++++|+++++++++.+ +.+.+||+++ ...++++|+++||+|+|.+|++++++|+++|+++|
T Consensus 52 ----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~v 125 (277)
T cd08255 52 ----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREV 125 (277)
T ss_pred ----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcE
Confidence 26999999999999999999999999888 7899999997 46889999999999889999999999999999449
Q ss_pred EEEcCChhhHHHHHhCC-CceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 222 IGVDTNPEKCEKAKAFG-VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 222 i~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+++++++++.+.++++| ++.++... + ....+ ++|++||+++........+++++++ |+++.+|....
T Consensus 126 i~~~~~~~~~~~~~~~g~~~~~~~~~--~--------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~ 194 (277)
T cd08255 126 VGVDPDAARRELAEALGPADPVAADT--A--------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGL 194 (277)
T ss_pred EEECCCHHHHHHHHHcCCCccccccc--h--------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCC
Confidence 99999999999999999 45444332 1 11233 8999999998777889999999997 99999997655
Q ss_pred CCceecchhhhhcCcEEEeeecCCCC---------CCCcHHHHHHHHHcCCCCCC
Q 018627 300 KPEVAAHYGLFLSGRTLKGSLFGGWK---------PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 300 ~~~~~~~~~~~~~~~~i~g~~~~~~~---------~~~~~~~~~~~l~~g~i~~~ 345 (353)
. ..........+.+++.+....... ..+.+.++++++.++++++.
T Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 248 (277)
T cd08255 195 K-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL 248 (277)
T ss_pred C-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc
Confidence 3 222221112345577666544321 12578999999999987643
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.90 E-value=3.6e-23 Score=207.59 Aligned_cols=253 Identities=19% Similarity=0.191 Sum_probs=212.2
Q ss_pred eEEEEeecC---CCCCCeEEEEEeeeecchhhhhhhccCC----------CCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627 25 LVVEEVEVN---PPQPEEIRIKVVCTSLCRSDITAWETQA----------IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (353)
Q Consensus 25 l~~~~~~~p---~~~~~eVlVrv~~~~i~~~D~~~~~g~~----------~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V 91 (353)
+.|.+-|.. +..++.=+.-|.|+.||..|+.+..|+. ...+++|-|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 777777754 3467888999999999999999999987 2336888888886 4669999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhh
Q 018627 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171 (353)
Q Consensus 92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~a 171 (353)
+++... -++++.+.++.+++|.+|++..++||
T Consensus 1499 M~mvpA------------------------------------------------ksLATt~l~~rd~lWevP~~WTleeA 1530 (2376)
T KOG1202|consen 1499 MGMVPA------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEEA 1530 (2376)
T ss_pred EEeeeh------------------------------------------------hhhhhhhhcchhhhhhCCcccchhhc
Confidence 997421 17999999999999999999999999
Q ss_pred hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C---CCceEeCCC
Q 018627 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F---GVTEFLNPN 246 (353)
Q Consensus 172 a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~---G~~~~~~~~ 246 (353)
+..|+.|+|+|+||+.+..+++|++||||++ |++|++++.+|.++|+ +|+.+..+++|++.+.+ | -..++-|.+
T Consensus 1531 stVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSR 1609 (2376)
T KOG1202|consen 1531 STVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSR 1609 (2376)
T ss_pred ccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccc
Confidence 9999999999999999999999999999955 9999999999999999 99999999999998865 3 333444544
Q ss_pred CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (353)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (353)
+.+|...+++.+.| |+|+|+++... +-++.+++|++.+ |||..+|-..-...-++-+..|++|.+++|...-+..
T Consensus 1610 --dtsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvm 1685 (2376)
T KOG1202|consen 1610 --DTSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVM 1685 (2376)
T ss_pred --cccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhh
Confidence 77899999999998 99999999986 6789999999997 9999999877666667778878899999998766544
Q ss_pred C--CCcHHHHHHHHHcC
Q 018627 326 P--KTDLPSLVNRYLKK 340 (353)
Q Consensus 326 ~--~~~~~~~~~~l~~g 340 (353)
. .+++.++..++++|
T Consensus 1686 ege~e~~~ev~~Lv~eG 1702 (2376)
T KOG1202|consen 1686 EGEEEMWREVAALVAEG 1702 (2376)
T ss_pred cCcHHHHHHHHHHHHhh
Confidence 2 24555677777666
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=5.4e-23 Score=162.35 Aligned_cols=105 Identities=37% Similarity=0.641 Sum_probs=91.9
Q ss_pred CCeEEEEEeeeecchhhhhhhccC----CCCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCC
Q 018627 37 PEEIRIKVVCTSLCRSDITAWETQ----AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 112 (353)
Q Consensus 37 ~~eVlVrv~~~~i~~~D~~~~~g~----~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~ 112 (353)
|+||||||++++||++|++.+.+. ..+|.++|||++|+|+++|+++++|++||||++.+...|+.|.+|+.+.++.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 789999999999999999999883 2889999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC
Q 018627 113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (353)
Q Consensus 113 c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i 162 (353)
|.+......+. .|+||||+.+|++.++|+
T Consensus 81 c~~~~~~g~~~---------------------~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGL---------------------DGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSS---------------------TCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCC---------------------CCcccCeEEEehHHEEEC
Confidence 97776544332 269999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.74 E-value=3.4e-17 Score=133.08 Aligned_cols=128 Identities=27% Similarity=0.414 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHH
Q 018627 204 TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 282 (353)
Q Consensus 204 ~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~ 282 (353)
++|++++|+|+++|+ +|++++++++|++.++++|++.+++++ +.++.+.+++.+++ ++|+||||+|....++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~--~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYS--DDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETT--TSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhccccccccc--ccccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 999999999999999999999999987 56799999999988 99999999998899999999
Q ss_pred HhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHc
Q 018627 283 SCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLK 339 (353)
Q Consensus 283 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~ 339 (353)
+++++ |+++.+|.... ...+++...+ ++++++.|++.+. .++++++++++.+
T Consensus 78 ~l~~~-G~~v~vg~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYGG-DPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HEEEE-EEEEEESSTST-SEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HhccC-CEEEEEEccCC-CCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 99997 99999999873 4555555555 5699999998776 5789999998864
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.36 E-value=1.5e-11 Score=120.57 Aligned_cols=153 Identities=20% Similarity=0.235 Sum_probs=114.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCC-----------ccHHHHHHH
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNN-----------EPVQQVIKR 258 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~-----------~~~~~~~~~ 258 (353)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ .++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 89999999999999999999864 5443211 133333333
Q ss_pred H-hc--CCccEEEeccCCh-----HH-HHHHHHHhccCCceEEEEcCCC-CCCceecchhhh-h-cCcEEEeeecCCCCC
Q 018627 259 I-TD--GGADYSFECIGDT-----GM-ITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGLF-L-SGRTLKGSLFGGWKP 326 (353)
Q Consensus 259 ~-~~--~~~dvv~d~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~-~-~~~~i~g~~~~~~~~ 326 (353)
. .+ +++|++|+|++.+ .. .+.+++.++++ |+++++|... +....+.....+ . +++++.|.+..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~---- 315 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDL---- 315 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCC----
Confidence 3 22 3799999999963 35 49999999997 9999999853 322233322223 3 68888887632
Q ss_pred CCcHH-HHHHHHHcCCCCCCCCcc
Q 018627 327 KTDLP-SLVNRYLKKVRNTRKPSC 349 (353)
Q Consensus 327 ~~~~~-~~~~~l~~g~i~~~~li~ 349 (353)
..+++ ++.+++.++.+++.++++
T Consensus 316 P~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 316 PSRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred chhHHHHHHHHHHhCCccHHHHhc
Confidence 23566 699999999999888887
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.27 E-value=1.4e-10 Score=111.11 Aligned_cols=149 Identities=18% Similarity=0.201 Sum_probs=114.1
Q ss_pred HHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhc
Q 018627 183 GAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261 (353)
Q Consensus 183 ~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
.++.+..+ ..+|++|+|.|+|.+|+.+++.++.+|+ +|++++.++.|++.++++|+..+ + ..+.+
T Consensus 190 ~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v----- 255 (413)
T cd00401 190 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV----- 255 (413)
T ss_pred HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH-----
Confidence 34444444 3689999999999999999999999999 89999999999999999998432 1 11222
Q ss_pred CCccEEEeccCChHHHHHH-HHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCcHH--HHHHHHH
Q 018627 262 GGADYSFECIGDTGMITTA-LQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP--SLVNRYL 338 (353)
Q Consensus 262 ~~~dvv~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~~l~ 338 (353)
.++|+||+|+|....+... +..++++ |+++.+|.. +..++.... ..+++++.++..... ..+|+ +.+.++.
T Consensus 256 ~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~~~L-~~~el~i~g~~~~~~--~~~~~~g~aI~LLa 329 (413)
T cd00401 256 KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDVKGL-KENAVEVVNIKPQVD--RYELPDGRRIILLA 329 (413)
T ss_pred cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCHHHH-HhhccEEEEccCCcc--eEEcCCcchhhhhh
Confidence 2589999999988878776 8999997 999999964 233443332 235888887764431 22566 7999999
Q ss_pred cCCC-CCCCCccCC
Q 018627 339 KKVR-NTRKPSCGN 351 (353)
Q Consensus 339 ~g~i-~~~~li~~~ 351 (353)
+|++ ++..+++|+
T Consensus 330 ~Grlvnl~~~~gH~ 343 (413)
T cd00401 330 EGRLVNLGCATGHP 343 (413)
T ss_pred CcCCCCCcccCCCc
Confidence 9999 999998887
No 131
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.44 E-value=4e-06 Score=80.86 Aligned_cols=104 Identities=23% Similarity=0.334 Sum_probs=79.8
Q ss_pred HHHHHHHhccCC-CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHH
Q 018627 181 GLGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (353)
Q Consensus 181 a~~al~~~~~~~-~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 259 (353)
.|.++.+..++. .|++|+|.|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 344554443544 89999999999999999999999999 899999998887777666754 221 22222
Q ss_pred hcCCccEEEeccCChHHHH-HHHHHhccCCceEEEEcCCCC
Q 018627 260 TDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 260 ~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~ 299 (353)
.++|++|+++|....+. ..+..++++ +.++.+|....
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d~ 303 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFDN 303 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCCC
Confidence 26999999999877675 677889997 99999997654
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.42 E-value=2.3e-06 Score=84.13 Aligned_cols=106 Identities=20% Similarity=0.282 Sum_probs=81.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCC-----------CccHHHHHHHH
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDN-----------NEPVQQVIKRI 259 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~-----------~~~~~~~~~~~ 259 (353)
.++++|+|+|+|.+|++++++++.+|+ .|++.+.+.++++.++++|++.+. +..+. ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 457999999999999999999999999 799999999999999999987632 22110 02333333333
Q ss_pred hc---CCccEEEecc---CChH---HHHHHHHHhccCCceEEEEcCCCC
Q 018627 260 TD---GGADYSFECI---GDTG---MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 260 ~~---~~~dvv~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
.. .++|++|+|+ |.+. ..++.++.++++ +.+|+++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 33 2799999999 5433 467778999997 99999987655
No 133
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.30 E-value=1.7e-05 Score=73.62 Aligned_cols=98 Identities=20% Similarity=0.343 Sum_probs=76.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
.+++|+|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|+..+ .+ .++.+.+ ..+|+||+|++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~l~~~l-----~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SELAEEV-----GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HHHHHHh-----CCCCEEEECCC
Confidence 58999999999999999999999999 99999999988888888886532 11 1222222 25999999987
Q ss_pred ChHHHHHHHHHhccCCceEEEEcCCCCCCc
Q 018627 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPE 302 (353)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 302 (353)
........++.++++ +.+++++..++..+
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd 248 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTD 248 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCcC
Confidence 644456677889997 99999998766443
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.26 E-value=8.1e-08 Score=93.29 Aligned_cols=160 Identities=16% Similarity=0.173 Sum_probs=103.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCc
Q 018627 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145 (353)
Q Consensus 66 ~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 145 (353)
.-|.|+++.+.+|+++..+ +|++.+-. |+.|-+| ++.|......+...+
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~~l~--------------------- 137 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGKVLE--------------------- 137 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchHHHH---------------------
Confidence 4588999999999988765 56666666 6666666 555665554332222
Q ss_pred cceeeeEEEeCCceEE---C-CCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeE
Q 018627 146 SSFSEYTVVHSGCAVK---V-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221 (353)
Q Consensus 146 g~~a~~~~~~~~~v~~---i-P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~v 221 (353)
+.|++++.++. .+.. + +..++...+|. ....+.....++++|+|+|+|.+|..+++.+...|+.+|
T Consensus 138 ~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av---------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V 207 (417)
T TIGR01035 138 RLFQKAFSVGK-RVRTETDISAGAVSISSAAV---------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI 207 (417)
T ss_pred HHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH---------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence 48888888765 3332 2 22222222211 111233344678999999999999999999999997689
Q ss_pred EEEcCChhhHH-HHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHH
Q 018627 222 IGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (353)
Q Consensus 222 i~~~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~ 276 (353)
++++++.++.+ .++++|.. .+.. .++.+.+. ++|+||.|++.+..
T Consensus 208 ~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l~-----~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 208 LIANRTYERAEDLAKELGGE-AVKF----EDLEEYLA-----EADIVISSTGAPHP 253 (417)
T ss_pred EEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHHh-----hCCEEEECCCCCCc
Confidence 99999988755 55667754 2221 12222222 59999999987543
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.23 E-value=1.9e-05 Score=75.84 Aligned_cols=100 Identities=22% Similarity=0.372 Sum_probs=77.5
Q ss_pred HHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 184 AAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 184 al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
++.+..+ ...|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+ ..+.+ .
T Consensus 184 ~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal-----~ 249 (406)
T TIGR00936 184 GILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA-----K 249 (406)
T ss_pred HHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----h
Confidence 3334334 3689999999999999999999999999 899999888887777777763 221 12222 2
Q ss_pred CccEEEeccCChHHHHH-HHHHhccCCceEEEEcCCC
Q 018627 263 GADYSFECIGDTGMITT-ALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 263 ~~dvv~d~~g~~~~~~~-~~~~l~~~~G~~v~~g~~~ 298 (353)
+.|++|+++|....+.. .+..++++ +.++.+|...
T Consensus 250 ~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 250 IGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred cCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 57999999998777764 78899997 9999998764
No 136
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.17 E-value=6.5e-06 Score=76.97 Aligned_cols=109 Identities=22% Similarity=0.230 Sum_probs=81.0
Q ss_pred CceEECCCCCChhhhhhhchhhhHHHHHHHHhcc---CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhH-H
Q 018627 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC-E 232 (353)
Q Consensus 157 ~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~---~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~-~ 232 (353)
...+++|+.+..+.+.... +.++++.++..... ..++++|+|+|+|.+|..+++.++..|..+|++++++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 3577889999888887776 78888887633222 14799999999999999999999988877899999998875 5
Q ss_pred HHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHH
Q 018627 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (353)
Q Consensus 233 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~ 276 (353)
.++++|+. +++. .++.+.+. .+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH----HHHHHHHh-----cCCEEEECCCCCch
Confidence 66778873 3322 12222222 48999999998655
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.16 E-value=2.5e-05 Score=75.79 Aligned_cols=102 Identities=24% Similarity=0.355 Sum_probs=79.1
Q ss_pred HHHHHHhccC-CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh
Q 018627 182 LGAAWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT 260 (353)
Q Consensus 182 ~~al~~~~~~-~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
+.++.+..++ -.|++|+|.|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. + .+.+.++
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence 3344444443 579999999999999999999999999 8999999888776777777652 1 1223332
Q ss_pred cCCccEEEeccCChHH-HHHHHHHhccCCceEEEEcCCC
Q 018627 261 DGGADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 261 ~~~~dvv~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
..|+++.+.|.... ....+..|+++ +.++.+|...
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 48999999997655 48899999997 9999999854
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.11 E-value=6.5e-05 Score=67.99 Aligned_cols=132 Identities=19% Similarity=0.184 Sum_probs=84.9
Q ss_pred ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC
Q 018627 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (353)
Q Consensus 147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~ 226 (353)
+|.+|.. +...++++++++++..+..-... .....+.+ ...++++||.+|+|. |..++.++ ..|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~--~~l~~l~~--~~~~~~~VLDiGcGs-G~l~i~~~-~~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPTTR--LCLEALEK--LVLPGKTVLDVGCGS-GILAIAAA-KLGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHHHH--HHHHHHHh--hcCCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEEEC
Confidence 5666644 66788999998888776432211 12222211 256899999999986 77766544 467757999999
Q ss_pred ChhhHHHHHhC----CCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCCh---HHHHHHHHHhccCCceEEEEcCCC
Q 018627 227 NPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT---GMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 227 ~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
++...+.+++. +....+... .+. .||+|+.+.... ..+....+.|+++ |+++..|...
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~-------------~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~ 216 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLP-------------QGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE 216 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEc-------------cCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence 99988877542 221111000 011 599999766542 2356677889997 9999987654
Q ss_pred C
Q 018627 299 L 299 (353)
Q Consensus 299 ~ 299 (353)
.
T Consensus 217 ~ 217 (250)
T PRK00517 217 E 217 (250)
T ss_pred h
Confidence 3
No 139
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.05 E-value=3.1e-05 Score=71.40 Aligned_cols=98 Identities=17% Similarity=0.305 Sum_probs=73.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
.|++++|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ .+ .++.+.+ ..+|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~l~~~l-----~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NKLEEKV-----AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HHHHHHh-----ccCCEEEECCC
Confidence 47999999999999999999999999 99999999988877777775422 11 1222222 25999999987
Q ss_pred ChHHHHHHHHHhccCCceEEEEcCCCCCCc
Q 018627 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPE 302 (353)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 302 (353)
....-...++.++++ ..+++++..+...+
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~td 247 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGGTD 247 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCCCC
Confidence 543335566788886 88999988765433
No 140
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.01 E-value=1.4e-05 Score=73.19 Aligned_cols=104 Identities=25% Similarity=0.358 Sum_probs=72.0
Q ss_pred hccCCCCCEEEEEcCChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
.+.+++|++||.+|+|. |..+.++++..+.. +|++++.+++.++.+++ +|...+... ..++. .+ ...++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~---~~d~~-~l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR---LGEIE-AL-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE---Ecchh-hC-CCCCC
Confidence 35678999999999876 88888888877653 79999999999888866 343322111 11111 11 11234
Q ss_pred CccEEEecc------CChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 263 GADYSFECI------GDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 263 ~~dvv~d~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
.||+|+... .....+..+++.|+++ |+++..+...
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~ 186 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVL 186 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeec
Confidence 899998643 2245789999999997 9999887643
No 141
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.96 E-value=0.00013 Score=71.06 Aligned_cols=126 Identities=21% Similarity=0.304 Sum_probs=85.9
Q ss_pred ceEECCCCCChhhhhhhchhhhHHHHHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (353)
Q Consensus 158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 236 (353)
.++.+|+...-..+-...-.....+.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+..
T Consensus 217 PV~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~ 295 (476)
T PTZ00075 217 PAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAM 295 (476)
T ss_pred eEEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHh
Confidence 355667765444332221111222234434333 4479999999999999999999999999 89999888777655555
Q ss_pred CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHH-HHHHHhccCCceEEEEcCCC
Q 018627 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 237 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 298 (353)
.|+.. . ++.+.++ ..|+|+.++|....+. ..+..|+++ +.++.+|...
T Consensus 296 ~G~~~-~-------~leell~-----~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 296 EGYQV-V-------TLEDVVE-----TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred cCcee-c-------cHHHHHh-----cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 56532 1 2233332 5899999998766664 788999997 9999998764
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.87 E-value=0.0001 Score=70.59 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=70.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.. ++........+ ...+.+.+ ..+|++|+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l-----~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAV-----KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHH-----ccCCEEEEcc
Confidence 34569999999999999999999999 89999999888877654 55432222211 12222222 2589999997
Q ss_pred C---C--hH-HHHHHHHHhccCCceEEEEcCCCC
Q 018627 272 G---D--TG-MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 272 g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+ . +. .....++.++++ +.+++++...+
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 3 2 11 236777889997 99999987544
No 143
>PRK08324 short chain dehydrogenase; Validated
Probab=97.85 E-value=0.00011 Score=76.13 Aligned_cols=138 Identities=22% Similarity=0.243 Sum_probs=88.1
Q ss_pred ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc
Q 018627 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (353)
Q Consensus 147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~ 225 (353)
++++|..+++..++.+ +..+.+++..... .......|+++||+|+ |++|..+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5778888887777777 6666666642110 0122346899999997 9999999999999999 899999
Q ss_pred CChhhHHHHHh-CCC--c-eE--eCCCCCCccHHHHHHHHh--cCCccEEEeccCCh-----------------------
Q 018627 226 TNPEKCEKAKA-FGV--T-EF--LNPNDNNEPVQQVIKRIT--DGGADYSFECIGDT----------------------- 274 (353)
Q Consensus 226 ~~~~~~~~~~~-~G~--~-~~--~~~~~~~~~~~~~~~~~~--~~~~dvv~d~~g~~----------------------- 274 (353)
++.++.+.+.+ ++. . .. .|..+ ...+.+.+.+.. .+++|++|+++|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 99887665533 432 1 11 23321 223333333321 24799999999831
Q ss_pred --HHHHHHHHHhcc---CCceEEEEcCCC
Q 018627 275 --GMITTALQSCCD---GWGLAVTLGVPK 298 (353)
Q Consensus 275 --~~~~~~~~~l~~---~~G~~v~~g~~~ 298 (353)
..++.++..+++ + |+++.+++..
T Consensus 533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~~ 560 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLG-GSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEECCcc
Confidence 123344555555 4 8999998743
No 144
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=97.81 E-value=2.6e-06 Score=68.46 Aligned_cols=93 Identities=17% Similarity=0.310 Sum_probs=53.3
Q ss_pred CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC--ChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCc
Q 018627 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG--DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR 314 (353)
Q Consensus 237 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 314 (353)
+||+++++|+ ..++ ...+++|+|||++| .+..+..+++++ ++ |+++.++. ... ......+..
T Consensus 1 LGAd~vidy~--~~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-----~~~-~~~~~~~~~ 64 (127)
T PF13602_consen 1 LGADEVIDYR--DTDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-----DLP-SFARRLKGR 64 (127)
T ss_dssp CT-SEEEETT--CSHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-----HHH-HHHHHHHCH
T ss_pred CCcCEEecCC--Cccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-----ccc-chhhhhccc
Confidence 6999999997 4445 22459999999999 544446666777 96 99999984 111 111111222
Q ss_pred EEEeeecCC--CC--CCCcHHHHHHHHHcCCCCCC
Q 018627 315 TLKGSLFGG--WK--PKTDLPSLVNRYLKKVRNTR 345 (353)
Q Consensus 315 ~i~g~~~~~--~~--~~~~~~~~~~~l~~g~i~~~ 345 (353)
.+.+..+.. .. ..+.++++++++.+|+|+|.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~ 99 (127)
T PF13602_consen 65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP 99 (127)
T ss_dssp HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---
T ss_pred ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe
Confidence 222233221 10 23459999999999999874
No 145
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.81 E-value=6.3e-05 Score=65.17 Aligned_cols=118 Identities=17% Similarity=0.184 Sum_probs=82.8
Q ss_pred CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHH----HHhCCCce
Q 018627 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE 241 (353)
Q Consensus 166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~G~~~ 241 (353)
++....-.++.+...|. +.+...+++|++||=+|+| .|..++-+++..+ +|+.+++.++-.+. ++.+|...
T Consensus 47 lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~n 121 (209)
T COG2518 47 LPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYEN 121 (209)
T ss_pred ccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence 33334444444444554 3477899999999999986 6999999999887 89999999875444 45688865
Q ss_pred EeCC-CCCCccHHHHHHHHhc-CCccEEEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627 242 FLNP-NDNNEPVQQVIKRITD-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 242 ~~~~-~~~~~~~~~~~~~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
+... .+... .... ++||.|+-+.+.+......+++|+++ |++|.--.
T Consensus 122 V~v~~gDG~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 122 VTVRHGDGSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred eEEEECCccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 4322 21111 1123 38999999988877778899999997 99876543
No 146
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.79 E-value=2.1e-05 Score=79.62 Aligned_cols=79 Identities=22% Similarity=0.320 Sum_probs=58.9
Q ss_pred cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC---------------------hhhHHHHHhCCCceEeCCCC-
Q 018627 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---------------------PEKCEKAKAFGVTEFLNPND- 247 (353)
Q Consensus 190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~---------------------~~~~~~~~~~G~~~~~~~~~- 247 (353)
....|++|+|+|+|+.|+++++.++.+|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 78888742 35667788899887766532
Q ss_pred CCccHHHHHHHHhcCCccEEEeccCCh
Q 018627 248 NNEPVQQVIKRITDGGADYSFECIGDT 274 (353)
Q Consensus 248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~ 274 (353)
.+... +.+ ..++|+||+++|..
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~ 233 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQ 233 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCC
Confidence 11111 122 23699999999974
No 147
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.61 E-value=0.0013 Score=59.49 Aligned_cols=81 Identities=22% Similarity=0.292 Sum_probs=56.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCce-EeCCCCCCccHHHHHH-HHh-cC
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-FLNPNDNNEPVQQVIK-RIT-DG 262 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~-~~~~~~~~~~~~~~~~-~~~-~~ 262 (353)
..++++||+|| +++|...+..+...|. +++.+.|+++|++.+.+ .|..- ++..+-.+.+-.+.+. ++. .+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 46789999998 8999999999999999 99999999999887633 33322 3222211333333333 332 22
Q ss_pred -CccEEEeccCC
Q 018627 263 -GADYSFECIGD 273 (353)
Q Consensus 263 -~~dvv~d~~g~ 273 (353)
.+|+.++++|.
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 79999999985
No 148
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.58 E-value=0.00013 Score=71.11 Aligned_cols=161 Identities=20% Similarity=0.181 Sum_probs=99.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCc
Q 018627 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145 (353)
Q Consensus 66 ~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 145 (353)
.-|+|+++.+.+|+++..+.-+|+ +-. |.+|+ +.+..|..........+
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI----lgQvk-~a~~~a~~~g~~g~~l~--------------------- 139 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI----LGQVK-DAYALAQEAGTVGTILN--------------------- 139 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCC-----hHH----HHHHH-HHHHHHHHcCCchHHHH---------------------
Confidence 459999999999999877644444 322 34555 22333433332111111
Q ss_pred cceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhcc---CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEE
Q 018627 146 SSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGLGTVGLSVAQGAKARGASRII 222 (353)
Q Consensus 146 g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~---~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi 222 (353)
+.|++.+ ++|+.+..+.+ ....+.++++.++..... ..++++|+|+|+|.+|.++++.+...|+.+|+
T Consensus 140 ~lf~~a~--------~~~k~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~ 210 (423)
T PRK00045 140 RLFQKAF--------SVAKRVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT 210 (423)
T ss_pred HHHHHHH--------HHHhhHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence 2455433 33444333333 222356677777633222 25789999999999999999999999987899
Q ss_pred EEcCChhhHH-HHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHH
Q 018627 223 GVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (353)
Q Consensus 223 ~~~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~ 276 (353)
++.++.++.+ +++++|.. ++++ .++.+.+ .++|+||+|++.+..
T Consensus 211 v~~r~~~ra~~la~~~g~~-~~~~----~~~~~~l-----~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 211 VANRTLERAEELAEEFGGE-AIPL----DELPEAL-----AEADIVISSTGAPHP 255 (423)
T ss_pred EEeCCHHHHHHHHHHcCCc-EeeH----HHHHHHh-----ccCCEEEECCCCCCc
Confidence 9999988865 56777753 3222 1222222 258999999987543
No 149
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.56 E-value=0.00088 Score=56.92 Aligned_cols=103 Identities=19% Similarity=0.242 Sum_probs=72.4
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
...++++|+.++-+|+| .|...+++++..-..+|++++++++.+++. ++||.+.+.... .+..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~---g~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE---GDAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe---ccchHhhcCCC--
Confidence 45678999988888885 466677888655555999999999988766 558877654432 22233333221
Q ss_pred CccEEEeccCC--hHHHHHHHHHhccCCceEEEEcC
Q 018627 263 GADYSFECIGD--TGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 263 ~~dvv~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
.+|.+|---|. +..++.+|..++++ |++|.--.
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 59999965443 45688999999997 99886544
No 150
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.54 E-value=0.0005 Score=60.78 Aligned_cols=79 Identities=22% Similarity=0.329 Sum_probs=58.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--ce--EeCCCCCCccHHHHHHHHhcC--Cc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TE--FLNPNDNNEPVQQVIKRITDG--GA 264 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~~--~~~~~~~~~~~~~~~~~~~~~--~~ 264 (353)
.++.++|+|+ +++|.+.++.+...|+ +|+.+.|++++++.+ .+++. .. .+|..+ .....+.+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4578899998 8999999999999999 999999999998877 44773 11 234332 23444455555444 79
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|+++++.|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999985
No 151
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.54 E-value=0.0003 Score=57.34 Aligned_cols=97 Identities=26% Similarity=0.368 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCc--eEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT--EFLNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
-.++++||+|+|++|.+++..+...|+++|+++.|+.+|.+.+. .++.. ..+.+. ++.+.+. .+|+||
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~~-----~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEALQ-----EADIVI 80 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHHH-----TESEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHHh-----hCCeEE
Confidence 36899999999999999999999999988999999999887664 45322 233332 2222222 599999
Q ss_pred eccCChHH--HHHHHHHhccCCceEEEEcCC
Q 018627 269 ECIGDTGM--ITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 269 d~~g~~~~--~~~~~~~l~~~~G~~v~~g~~ 297 (353)
+|++.+.. ....+....+..+.++.++.+
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred EecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence 99886432 122222222210467788653
No 152
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.50 E-value=0.00055 Score=63.30 Aligned_cols=98 Identities=21% Similarity=0.289 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHHHhcCCcc
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITDGGAD 265 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~~~~~~~d 265 (353)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++ .+... +.... .+ ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~---~~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL---IY----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cc----cccccCCCce
Confidence 45789999999875 776666655 577799999999988777654 22221 11110 11 1112234899
Q ss_pred EEEeccCCh---HHHHHHHHHhccCCceEEEEcCCC
Q 018627 266 YSFECIGDT---GMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 266 vv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
+|+.+.... ..+....+.++++ |+++..|...
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~~ 262 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGILE 262 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCcH
Confidence 999765432 3456667899997 9999987643
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0021 Score=58.89 Aligned_cols=79 Identities=19% Similarity=0.317 Sum_probs=56.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHH---hcCCccEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRI---TDGGADYS 267 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~---~~~~~dvv 267 (353)
.++++||+|+ |++|..+++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++...+... ..+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 4678999998 9999999999988999 89999999988887777665443 24331 22333333322 23579999
Q ss_pred EeccCC
Q 018627 268 FECIGD 273 (353)
Q Consensus 268 ~d~~g~ 273 (353)
++++|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 154
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0024 Score=58.28 Aligned_cols=77 Identities=26% Similarity=0.391 Sum_probs=55.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEEec
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSFEC 270 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~d~ 270 (353)
+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+.+.+.... .+++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 57899998 8999999999999999 89999999888777766665433 34431 233333333332 2379999999
Q ss_pred cCC
Q 018627 271 IGD 273 (353)
Q Consensus 271 ~g~ 273 (353)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 983
No 155
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.38 E-value=0.0033 Score=55.82 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=66.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-Hh---CCCceEe--CCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTEFL--NPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~---~G~~~~~--~~~~~~~~~~~~~~~~~--~~~ 263 (353)
++++|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++ .+....+ |..+ ...+.+.+.+.. -++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4789999998 8999999999999999 899999988877655 22 2322222 2221 222333232221 136
Q ss_pred ccEEEeccCChH-----------------------HHHHHHHHhccCCceEEEEcCCC
Q 018627 264 ADYSFECIGDTG-----------------------MITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 264 ~dvv~d~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
+|.++.+.+... .++..+..++++ |+++.++...
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 899999887421 133444566676 8999998753
No 156
>PRK06182 short chain dehydrogenase; Validated
Probab=97.36 E-value=0.0025 Score=58.15 Aligned_cols=79 Identities=20% Similarity=0.374 Sum_probs=56.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~ 268 (353)
+++++||+|+ |++|..+++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++.+.+.+.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 4678999998 8999999999988999 89999999888776665554432 23331 233333344332 23799999
Q ss_pred eccCC
Q 018627 269 ECIGD 273 (353)
Q Consensus 269 d~~g~ 273 (353)
+++|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 157
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.35 E-value=0.0021 Score=53.60 Aligned_cols=94 Identities=21% Similarity=0.396 Sum_probs=63.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
+-.|++++|.|-|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|+. +. .+.+.+ ...|++|-+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEEEC
Confidence 4579999999999999999999999999 999999999887777666754 21 122222 258999999
Q ss_pred cCChHH-HHHHHHHhccCCceEEEEcCCCC
Q 018627 271 IGDTGM-ITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 271 ~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+|.... -.+.+..|+++ ..+..+|....
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~d~ 114 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAGHFDV 114 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESSSSTT
T ss_pred CCCccccCHHHHHHhcCC-eEEeccCcCce
Confidence 997553 46778999996 77777776543
No 158
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.24 E-value=0.0023 Score=55.28 Aligned_cols=110 Identities=21% Similarity=0.276 Sum_probs=75.1
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceE-eCCCCCCcc---HHHHHHHHhcCCc
Q 018627 192 SKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF-LNPNDNNEP---VQQVIKRITDGGA 264 (353)
Q Consensus 192 ~~g~~vLV~Ga--g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~-~~~~~~~~~---~~~~~~~~~~~~~ 264 (353)
+..+.|||+|+ |++|.+++.-....|+ .|+++.|+-+..+.+. ++|.... +|..+ +++ +...++...+|+.
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~-~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSK-PEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCC-hHHHHHHHHHHhhCCCCce
Confidence 34578999974 8999999998889999 9999999999988886 6775432 33321 233 3344555566799
Q ss_pred cEEEeccCChH----------H--------------HHHHH--HHhccCCceEEEEcCCCCCCcee
Q 018627 265 DYSFECIGDTG----------M--------------ITTAL--QSCCDGWGLAVTLGVPKLKPEVA 304 (353)
Q Consensus 265 dvv~d~~g~~~----------~--------------~~~~~--~~l~~~~G~~v~~g~~~~~~~~~ 304 (353)
|+.++++|.+- . +..++ .+++. .|++|.+|+...-.+++
T Consensus 83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGVVPFP 147 (289)
T ss_pred EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEEeccc
Confidence 99999888630 0 11122 24556 49999999866544444
No 159
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.24 E-value=0.004 Score=59.39 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=69.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC---Cce-EeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VTE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G---~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
.+|||+|+|.+|+.+++.+.+.+-.+|++.+++.++.+.+.+.. ... .+|..+ .+.+.+.++ ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~-----~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIK-----DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHh-----cCCEEEEe
Confidence 57999999999999999998888559999999999998887653 222 233331 223333333 36999999
Q ss_pred cCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 271 IGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
.+....+...-.+++.+ =.++++.....
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~~ 103 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYYEE 103 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccCCc
Confidence 98766554444566664 67888776654
No 160
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.22 E-value=0.0027 Score=61.05 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=73.9
Q ss_pred hhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHH
Q 018627 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256 (353)
Q Consensus 177 ~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 256 (353)
+-...+..+.+..++++|++||.+|+| .|..+..+++..|+ +|++++.+++..+.+++......+... ..++.
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~--~~D~~--- 223 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIR--LQDYR--- 223 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEE--ECchh---
Confidence 334445556677888999999999985 56777888888898 999999999999988764321111110 11221
Q ss_pred HHHhcCCccEEEec-----cCC---hHHHHHHHHHhccCCceEEEEc
Q 018627 257 KRITDGGADYSFEC-----IGD---TGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 257 ~~~~~~~~dvv~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (353)
.. .+.||.|+.. +|. ...+....+.|+|+ |+++...
T Consensus 224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 11 3479988743 332 24577788899997 9988754
No 161
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.20 E-value=0.0046 Score=56.47 Aligned_cols=112 Identities=22% Similarity=0.278 Sum_probs=73.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee----CCCCCCccHHHHHHHH--
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL----NPNDNNEPVQQVIKRI-- 259 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~----~~~~~~~~~~~~~~~~-- 259 (353)
-.|+.|+|+|| +++|.+++.-....|+ +++.+.+..++++.+ ++.+... ++ |.. +..+..+.+.+.
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs-~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVS-DEESVKKFVEWAIR 87 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccC-CHHHHHHHHHHHHH
Confidence 36889999998 8999999998889999 777776777776655 4445444 22 221 123333333332
Q ss_pred hcCCccEEEeccCCh-------------------------HHHHHHHHHhccCC-ceEEEEcCCCCCCceec
Q 018627 260 TDGGADYSFECIGDT-------------------------GMITTALQSCCDGW-GLAVTLGVPKLKPEVAA 305 (353)
Q Consensus 260 ~~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~ 305 (353)
.-+++|+.++++|-. .....++..|++.. |++|.+++..+...+++
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 234899999998842 12344555555544 99999998777555554
No 162
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.20 E-value=0.005 Score=53.59 Aligned_cols=102 Identities=18% Similarity=0.284 Sum_probs=69.5
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHH----hCC-CceEeCCCCCCccHHHHHHHHh
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFG-VTEFLNPNDNNEPVQQVIKRIT 260 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~G-~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
...++.++++||.+|+|. |..++.+++..+. .+|++++.+++..+.++ ++| .+.+.... .+..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~-~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT-I 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-c
Confidence 456788999999999976 8888888887642 38999999998887653 356 33322111 122222222 2
Q ss_pred cCCccEEEeccCC---hHHHHHHHHHhccCCceEEEE
Q 018627 261 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 261 ~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (353)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 3479999986543 34577788899997 998853
No 163
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.17 E-value=0.0025 Score=54.88 Aligned_cols=79 Identities=22% Similarity=0.269 Sum_probs=55.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC--Cce-EeCCCCC--CccHHHHHHHHhcCCccE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTE-FLNPNDN--NEPVQQVIKRITDGGADY 266 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G--~~~-~~~~~~~--~~~~~~~~~~~~~~~~dv 266 (353)
.|.+|||+|+ +++|+++++-...+|- +||.+.|++++++.+++.- ... +.|..+. ...+++.+++-.+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 4789999976 8899999999999998 9999999999999987732 111 2333311 1224444443222 5789
Q ss_pred EEeccCC
Q 018627 267 SFECIGD 273 (353)
Q Consensus 267 v~d~~g~ 273 (353)
+++|+|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9988873
No 164
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.17 E-value=0.0036 Score=58.65 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=71.3
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhc
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITD 261 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
+..+++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+.+.. .
T Consensus 74 ~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~--~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE--F 147 (322)
T ss_pred HhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc--c
Confidence 55678899999999987 58888899987763 36999999998766554 36665433221 122221111 1
Q ss_pred CCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627 262 GGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 262 ~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (353)
+.+|+|+.+.+........++.++++ |+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 37999999888766667788999997 998763
No 165
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.16 E-value=0.0027 Score=54.37 Aligned_cols=115 Identities=27% Similarity=0.336 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
-.|++|.|+|.|.+|..++++++.+|+ +|++.+++....+...+.++. ..++.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce--------eeehhhhcch-----hhhhhhhh
Confidence 358999999999999999999999999 999999988877655555542 1234445544 88999887
Q ss_pred CChH-----HHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC
Q 018627 272 GDTG-----MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323 (353)
Q Consensus 272 g~~~-----~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (353)
.... .-...+..|+++ ..+|.++-..- .+.. .....+++-.+.|...--
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~aRG~~-vde~-aL~~aL~~g~i~ga~lDV 153 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVARGEL-VDED-ALLDALESGKIAGAALDV 153 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESSSGGG-B-HH-HHHHHHHTTSEEEEEESS
T ss_pred ccccccceeeeeeeeeccccc-eEEEeccchhh-hhhh-HHHHHHhhccCceEEEEC
Confidence 7321 125667889986 88888875322 1111 122234555565554433
No 166
>PRK12742 oxidoreductase; Provisional
Probab=97.15 E-value=0.0098 Score=52.73 Aligned_cols=102 Identities=19% Similarity=0.290 Sum_probs=63.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH-HhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
.++++||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+.+ .++++..+ .|..+ ...+.+.+.+ .+++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4789999998 8999999999999999 7776644 44554443 44565433 23221 2223333322 24799999
Q ss_pred eccCChH-------------------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627 269 ECIGDTG-------------------------MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 269 d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+++|... ....+...++.. |+++.++....
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~~ 135 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVNG 135 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecccc
Confidence 9987420 012333445665 89998886543
No 167
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.06 E-value=0.049 Score=50.52 Aligned_cols=140 Identities=14% Similarity=0.152 Sum_probs=87.4
Q ss_pred ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhcc---CCCCCEEEEEcC-ChHHHHHHHHHH-HCCCCeE
Q 018627 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGL-GTVGLSVAQGAK-ARGASRI 221 (353)
Q Consensus 147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~---~~~g~~vLV~Ga-g~vG~~a~~la~-~~g~~~v 221 (353)
.|-+|.++..+....- .....++..-+ .+.|.|-. .+... .-..+.|+|.+| +-.++.++..++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 5667777765543311 12222233333 55666643 23222 233466777787 568888888888 4554488
Q ss_pred EEEcCChhhHHHHHhCCC-ceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 222 IGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 222 i~~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+++ +|+.+.+..+.+|. +.++.|+ .+..+.....-+++|..|+.......-+.+...--..+.+|..+.
T Consensus 166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd--------~i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 166 VGL-TSARNVAFVESLGCYDEVLTYD--------DIDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred EEE-ecCcchhhhhccCCceEEeehh--------hhhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 888 66777778888995 4466664 344443346779999999988777777777775345677776554
No 168
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.013 Score=51.98 Aligned_cols=79 Identities=23% Similarity=0.309 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCC---CceEe--CCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG---VTEFL--NPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G---~~~~~--~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++. ....+ +.. +..++.+.+.... .++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVR-DEADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCC-CHHHHHHHHHHHHHHcCC
Confidence 4688999998 8999999999888899 899999988776544 2232 11122 222 1233333333322 137
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 169
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0099 Score=56.16 Aligned_cols=79 Identities=27% Similarity=0.256 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|..+++.+...|+ +|+++++++++++.+ ++.|.... .|..+ ..++.+.+.... -+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4678999998 8999999999999999 899888988776543 33454332 23321 223333332221 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|+++|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 170
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.011 Score=53.53 Aligned_cols=79 Identities=20% Similarity=0.344 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
.++++||+|+ |++|..++..+...|+ +|++++++.++.+.+ ++++... . .|..+ ..++.+.+.... .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999998 8999999999999999 999999988765544 4444321 1 23321 233333333321 23789
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99999874
No 171
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.011 Score=54.77 Aligned_cols=79 Identities=24% Similarity=0.311 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--ceE---eCCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TEF---LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~~~---~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.|+++||+|+ |++|..+++.+...|+ +|+++++++++++.+ ++++. ... .|..+ ..+..+.+.+.. .++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 8999999999999999 899999988876654 33442 111 23321 223333333322 247
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++++++|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 172
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.016 Score=51.83 Aligned_cols=101 Identities=20% Similarity=0.231 Sum_probs=61.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh-hHHH----HHhCCCce-E--eCCCCCCccHHHHHHHHhc--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~----~~~~G~~~-~--~~~~~~~~~~~~~~~~~~~-- 261 (353)
.++++||+|+ |++|..++..+...|+ +|+++.++.+ +.+. ++..+... . .|..+ ..++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4689999998 8999999999988999 8888777643 3322 22333221 1 23321 2233333332221
Q ss_pred CCccEEEeccCCh-------------------HHHHHHHHHhccCCceEEEEcC
Q 018627 262 GGADYSFECIGDT-------------------GMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 262 ~~~dvv~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
+++|+++.+.+.. ..++.+...+... |+++.+++
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689999887642 1234444555565 89998876
No 173
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.87 E-value=0.015 Score=45.92 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=67.1
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
+...+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++ ++...+.... .+....... ..+
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~ 87 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE---GDAPEALED-SLP 87 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe---ccccccChh-hcC
Confidence 445677788999999864 8888888888754489999999988777643 4443321111 011000111 123
Q ss_pred CccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627 263 GADYSFECIGD---TGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 263 ~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (353)
.+|+|+...+. ...++.+.+.|+++ |+++...
T Consensus 88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 88 EPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 79999975433 23678888999997 9988653
No 174
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.019 Score=50.67 Aligned_cols=79 Identities=22% Similarity=0.261 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH----HHhCCCceE-eCCCCCCccHHHHHHHHh--cCCc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGA 264 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~ 264 (353)
+++++||+|+ |.+|..+++.+...|+ +|++++++.++... +++.+...+ .|..+ ..++.+.+.... -+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4789999998 8999999999988899 89999887765332 223333221 22221 222333233221 2379
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|+++++.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998874
No 175
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.84 E-value=0.01 Score=50.54 Aligned_cols=94 Identities=21% Similarity=0.290 Sum_probs=62.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC--
Q 018627 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD-- 273 (353)
Q Consensus 197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~-- 273 (353)
|+|+|+ |.+|..+++.+...|. +|++..|++++.+. ..++..+. .+ -.+. +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d--~~d~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GD--LFDP-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SC--TTCH-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-ee--ehhh-hhhhhhhh-hcchhhhhhhhhc
Confidence 789998 9999999999999998 99999999998877 44444332 22 1122 23333222 69999999984
Q ss_pred --hHHHHHHHHHhccC-CceEEEEcCCC
Q 018627 274 --TGMITTALQSCCDG-WGLAVTLGVPK 298 (353)
Q Consensus 274 --~~~~~~~~~~l~~~-~G~~v~~g~~~ 298 (353)
.......++.++.. -.+++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 23344555555443 14788777544
No 176
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0082 Score=53.02 Aligned_cols=77 Identities=22% Similarity=0.331 Sum_probs=52.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE--eCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
+++||+|+ |++|..++..+...|+ +|+++++++++.+.+++++-... .|..+ ..++.+.+.....+++|++|.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 57899998 9999999999988999 99999998877766655432222 23221 22333333333334899999987
Q ss_pred CC
Q 018627 272 GD 273 (353)
Q Consensus 272 g~ 273 (353)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 177
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.82 E-value=0.025 Score=48.63 Aligned_cols=102 Identities=23% Similarity=0.163 Sum_probs=62.6
Q ss_pred ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcC-CccE
Q 018627 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDG-GADY 266 (353)
Q Consensus 189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~-~~dv 266 (353)
..+++|++||.+|+|+-+.+.....+..+..+|++++.++.. +..++..+ .+.. +....+.+++..+. ++|+
T Consensus 28 ~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~--~~~~~~~l~~~~~~~~~D~ 101 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFT--DEEVLNKIRERVGDDKVDV 101 (188)
T ss_pred cccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCC--ChhHHHHHHHHhCCCCccE
Confidence 457899999999987545444443344344489999998864 11233322 1222 23334445554444 8999
Q ss_pred EEecc-----CC------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627 267 SFECI-----GD------------TGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 267 v~d~~-----g~------------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
|+... |. ...+..+.+.|+++ |+++.....
T Consensus 102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~~ 148 (188)
T TIGR00438 102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVFQ 148 (188)
T ss_pred EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEcc
Confidence 99532 21 24677788999997 999986543
No 178
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.82 E-value=0.0019 Score=56.67 Aligned_cols=103 Identities=21% Similarity=0.299 Sum_probs=66.2
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHH----HhCCCceEe-CCCCCCccHHHHHHHH
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKA----KAFGVTEFL-NPNDNNEPVQQVIKRI 259 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~----~~~G~~~~~-~~~~~~~~~~~~~~~~ 259 (353)
.+..++++|++||-+|+| .|..++.+++..|.. .|+.+++.++-.+.+ +++|...+. ... +. ..-. .
T Consensus 65 l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g--dg--~~g~--~ 137 (209)
T PF01135_consen 65 LEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG--DG--SEGW--P 137 (209)
T ss_dssp HHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---G--GGTT--G
T ss_pred HHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc--ch--hhcc--c
Confidence 467789999999999875 477777777776642 699999998766555 335665432 111 11 0001 1
Q ss_pred hcCCccEEEeccCChHHHHHHHHHhccCCceEEE-EcC
Q 018627 260 TDGGADYSFECIGDTGMITTALQSCCDGWGLAVT-LGV 296 (353)
Q Consensus 260 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~-~g~ 296 (353)
..++||.|+-+.+.+......++.|+++ |++|. ++.
T Consensus 138 ~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~ 174 (209)
T PF01135_consen 138 EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ 174 (209)
T ss_dssp GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence 1238999999888777778888999997 99887 544
No 179
>PRK08017 oxidoreductase; Provisional
Probab=96.81 E-value=0.0079 Score=54.02 Aligned_cols=77 Identities=27% Similarity=0.425 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHH---HHHHHhcCCccEEEe
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQ---VIKRITDGGADYSFE 269 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~---~~~~~~~~~~dvv~d 269 (353)
+++||+|+ |++|..+++.+...|+ +|++++++.++.+.+++.++..+. |..+ ...+.+ .+.+...+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999999999 899999999988888777765432 3321 222222 222223357899998
Q ss_pred ccCC
Q 018627 270 CIGD 273 (353)
Q Consensus 270 ~~g~ 273 (353)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 180
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.81 E-value=0.012 Score=59.06 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=39.9
Q ss_pred HhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627 187 NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~ 234 (353)
+..+.+.|++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 3456778999999998 9999999999999999 899988998877644
No 181
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.80 E-value=0.017 Score=56.91 Aligned_cols=79 Identities=20% Similarity=0.350 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHH-HHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCE-KAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~-~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
+++++||+|+ |++|..+++.+...|+ +|+++++++ ++++ ..++++...+ .|..+ .....+.+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 5789999998 9999999999999999 888887643 2222 3344554332 23331 222222222221 23799
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
++|++.|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999883
No 182
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.78 E-value=0.0047 Score=48.02 Aligned_cols=94 Identities=22% Similarity=0.169 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HCCCCeEEEEcCChhhHHHHHhC----CC-ceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKAF----GV-TEFLNPNDNNEPVQQVIKRITDGGADY 266 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~-~~g~~~vi~~~~~~~~~~~~~~~----G~-~~~~~~~~~~~~~~~~~~~~~~~~~dv 266 (353)
||++||-+|+| .|..++.+++ ..++ +|++++.+++.++.+++. +. +.+... ..++ .......++||+
T Consensus 1 p~~~vLDlGcG-~G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~---~~d~--~~~~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGCG-TGRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFV---QGDA--EFDPDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETTT-TSHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEE---ESCC--HGGTTTSSCEEE
T ss_pred CCCEEEEEcCc-CCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEE---ECcc--ccCcccCCCCCE
Confidence 68899999986 4777777777 4677 999999999988877552 22 222111 1122 111112337999
Q ss_pred EEecc-CC---hH------HHHHHHHHhccCCceEEEE
Q 018627 267 SFECI-GD---TG------MITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 267 v~d~~-g~---~~------~~~~~~~~l~~~~G~~v~~ 294 (353)
|+... .. .. .++...+.|+|+ |+++.-
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 99876 21 11 367788899997 998863
No 183
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.76 E-value=0.01 Score=51.98 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=65.9
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHH----hCCCce---EeCCCCCCccHHHHHH
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVTE---FLNPNDNNEPVQQVIK 257 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~----~~G~~~---~~~~~~~~~~~~~~~~ 257 (353)
.+..+++++++||-+|+| .|..++.+++..+ ..+|++++.+++-.+.++ +.|... ++..+ ..+.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d-----~~~~~~ 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD-----GKRGLE 138 (205)
T ss_pred HHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-----cccCCc
Confidence 356678899999999875 4666677777664 238999999988766554 345421 22211 111111
Q ss_pred HHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 258 ~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (353)
..+.||+|+-+.......+...+.|+++ |+++..
T Consensus 139 --~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 --KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred --cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999987766555667778999997 998764
No 184
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.72 E-value=0.017 Score=51.59 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC--Cce-Ee--CCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG--VTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G--~~~-~~--~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ +. ... .+ |.. +...+...+.+.. .+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVS-DEADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhCC
Confidence 4678999998 8999999999988999 79999999877655422 22 111 12 222 1233333333221 237
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 185
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.72 E-value=0.01 Score=54.91 Aligned_cols=137 Identities=19% Similarity=0.257 Sum_probs=74.1
Q ss_pred ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC
Q 018627 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (353)
Q Consensus 147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~ 226 (353)
.|.++-.-+.+.++.+.+++.|-....-.+.++ ..+|.+ -..+|++||-+|+| .|..++. |..+|+++|+++|.
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG~H~TT~lc--l~~l~~--~~~~g~~vLDvG~G-SGILaia-A~klGA~~v~a~Di 192 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTGHHPTTRLC--LELLEK--YVKPGKRVLDVGCG-SGILAIA-AAKLGAKKVVAIDI 192 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SSHCHHHHHH--HHHHHH--HSSTTSEEEEES-T-TSHHHHH-HHHTTBSEEEEEES
T ss_pred CCcccCCCCCcEEEEECCCCcccCCCCHHHHHH--HHHHHH--hccCCCEEEEeCCc-HHHHHHH-HHHcCCCeEEEecC
Confidence 455552224456778877776554432221111 112222 26788999999864 2333333 33469989999999
Q ss_pred ChhhHHHHHh----CCCce-E-eCCCCCCccHHHHHHHHhcCCccEEEeccCChHH---HHHHHHHhccCCceEEEEcCC
Q 018627 227 NPEKCEKAKA----FGVTE-F-LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM---ITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 227 ~~~~~~~~~~----~G~~~-~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~---~~~~~~~l~~~~G~~v~~g~~ 297 (353)
++...+.+++ -|... + +... .+. ..++||+|+-++-.... .....+.++++ |.+++.|..
T Consensus 193 Dp~Av~~a~~N~~~N~~~~~~~v~~~---~~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl 261 (295)
T PF06325_consen 193 DPLAVEAARENAELNGVEDRIEVSLS---EDL-------VEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGIL 261 (295)
T ss_dssp SCHHHHHHHHHHHHTT-TTCEEESCT---SCT-------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEEEe---ccc-------ccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEcccc
Confidence 9976665543 23222 2 2111 111 12589999988765333 33344678997 999999987
Q ss_pred CCC
Q 018627 298 KLK 300 (353)
Q Consensus 298 ~~~ 300 (353)
..+
T Consensus 262 ~~~ 264 (295)
T PF06325_consen 262 EEQ 264 (295)
T ss_dssp GGG
T ss_pred HHH
Confidence 653
No 186
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0081 Score=56.69 Aligned_cols=79 Identities=24% Similarity=0.390 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHH--hcC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRI--TDG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~--~~~ 262 (353)
.++++||+|+ |++|.++++.+...|+ +|+++++++++++.+ ++.|.... .|..+ .++..+.+.+. ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 5789999998 8999999999999999 899999998877543 34565432 23321 22222222222 124
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999983
No 187
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.013 Score=52.17 Aligned_cols=77 Identities=21% Similarity=0.380 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceE-eCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE 269 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d 269 (353)
.++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ .+...+ .|.. +......+.+. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~v~~~~~~-~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVG--DDAAIRAALAA-AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCC--CHHHHHHHHHH-hCCCCEEEE
Confidence 5689999998 8999999999999999 89999898877765533 444332 2332 22211222111 237999999
Q ss_pred ccCC
Q 018627 270 CIGD 273 (353)
Q Consensus 270 ~~g~ 273 (353)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9874
No 188
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.68 E-value=0.022 Score=50.15 Aligned_cols=100 Identities=21% Similarity=0.325 Sum_probs=67.2
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCCceE--eCCCCCCccHHHHHHH
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKR 258 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~~~~--~~~~~~~~~~~~~~~~ 258 (353)
.+..+++++++||-+|+| .|..+..+++..+. .+|++++.+++-.+.+++ .|...+ +..+. ...+
T Consensus 69 ~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~------ 140 (212)
T PRK13942 69 CELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY------ 140 (212)
T ss_pred HHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC------
Confidence 456788999999999875 46677777777653 389999999988776644 454322 21110 0001
Q ss_pred HhcCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627 259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 259 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (353)
...+.||+|+-...........++.|+++ |+++..
T Consensus 141 ~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01237999887655556667788999997 998775
No 189
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.031 Score=50.43 Aligned_cols=77 Identities=22% Similarity=0.231 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC-C-ceE--eCCCCCCccHHHHHHHHh---cCCcc
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG-V-TEF--LNPNDNNEPVQQVIKRIT---DGGAD 265 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G-~-~~~--~~~~~~~~~~~~~~~~~~---~~~~d 265 (353)
+++||+|+ |++|..+++.+...|+ +|++++++.++.+.+.+ ++ . ..+ .|..+ ...+.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 57999998 8999999999988999 89999898887766643 32 1 112 23331 233333333321 34899
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
+++.++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999885
No 190
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.031 Score=49.86 Aligned_cols=79 Identities=20% Similarity=0.232 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|..++..+...|+ +|+++++++++.+.+ +..+... ++ |..+ ..++.+.+.+.. -+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999998 8999999999999999 888888887765543 2233222 22 3321 222222222221 14
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999885
No 191
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.03 Score=49.91 Aligned_cols=79 Identities=25% Similarity=0.367 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE-e--CCCCCCccHHHHHHHHh--cCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++.... + |..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999998 9999999999999999 899998887765544 44554321 1 2221 222222222221 23789
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
++|.++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
No 192
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.013 Score=52.70 Aligned_cols=79 Identities=27% Similarity=0.380 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS 267 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv 267 (353)
.|++|||+|+ |++|..+++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ ...+.+.+.... .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999999999999 899998888776544 34443322 23321 222333333221 1378999
Q ss_pred EeccCC
Q 018627 268 FECIGD 273 (353)
Q Consensus 268 ~d~~g~ 273 (353)
+.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 193
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.62 E-value=0.012 Score=57.03 Aligned_cols=97 Identities=21% Similarity=0.222 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 269 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d 269 (353)
--.+.+|||+|+|.+|.+++..+...|+.+++++.|+.++.+.+ .+++....+.+ .++.+.+ ..+|+||.
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~----~~l~~~l-----~~aDiVI~ 248 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL----SELPQLI-----KKADIIIA 248 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH----HHHHHHh-----ccCCEEEE
Confidence 34688999999999999999999999988899999998886655 44552222222 1122222 25999999
Q ss_pred ccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627 270 CIGDTGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 270 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
|++.+..+-. .+.++...=-+++++.+
T Consensus 249 aT~a~~~vi~-~~~~~~~~~~~iDLavP 275 (414)
T PRK13940 249 AVNVLEYIVT-CKYVGDKPRVFIDISIP 275 (414)
T ss_pred CcCCCCeeEC-HHHhCCCCeEEEEeCCC
Confidence 9998654321 11222110235677654
No 194
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.57 E-value=0.027 Score=47.68 Aligned_cols=97 Identities=19% Similarity=0.291 Sum_probs=63.7
Q ss_pred hhhchhhhHHHHHHHHhccCCCCCEEEEEcCCh-HHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 172 a~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~-vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
...|+....+...+.+...--.|++|||+|+|. +|..++..++..|+ +|+.+.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 334443333333333333345789999999986 69989999999999 7888765421
Q ss_pred cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
++.+.++ .+|+||.+++.+..+.. +.++++ -.++.++.+.
T Consensus 80 ~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 2223333 38999999998664433 356775 7788887654
No 195
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.016 Score=50.93 Aligned_cols=77 Identities=21% Similarity=0.288 Sum_probs=53.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
+++||+|+ |++|..+++.+...|+ +|++++++.++.+.++..+... ..|..+ ...+.+.+.....+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 47899987 8999999998888899 8999989888877776666432 223331 223333322332337999999887
Q ss_pred C
Q 018627 273 D 273 (353)
Q Consensus 273 ~ 273 (353)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 196
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.032 Score=50.18 Aligned_cols=79 Identities=16% Similarity=0.215 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh---CCCce-Ee--CCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.|+++||+|+ |++|..+++.+...|+ +|+++++++++.+..++ .+... .+ |..+ ...+...+.+.. .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 4679999998 8999999999999999 78888888776544333 34321 22 2221 222333333322 247
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999983
No 197
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.56 E-value=0.0064 Score=51.49 Aligned_cols=103 Identities=21% Similarity=0.235 Sum_probs=67.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC-CCCC--------------CccHHHHHHH
Q 018627 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-PNDN--------------NEPVQQVIKR 258 (353)
Q Consensus 194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~-~~~~--------------~~~~~~~~~~ 258 (353)
..+|+|+|+|.+|+.|+.+++.+|+ +++..+...++++..+..++..+.. +.+. .....+.+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4789999999999999999999999 9999999999998888887765432 1110 1122222222
Q ss_pred HhcCCccEEEeccC-----ChH-HHHHHHHHhccCCceEEEEcCCCC
Q 018627 259 ITDGGADYSFECIG-----DTG-MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 259 ~~~~~~dvv~d~~g-----~~~-~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
... .+|+++.+.- .+. ..+..++.|+++ ..++++....+
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g 143 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG 143 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence 211 4788885431 122 235667889986 88888876444
No 198
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.017 Score=52.30 Aligned_cols=81 Identities=20% Similarity=0.318 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCceE--e--CCCCCCccHHHHHHHH
Q 018627 191 ISKGSTVVIFGL-G-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTEF--L--NPNDNNEPVQQVIKRI 259 (353)
Q Consensus 191 ~~~g~~vLV~Ga-g-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~~--~--~~~~~~~~~~~~~~~~ 259 (353)
+..++++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+ +|...+ + |..+ ...+...+...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 345789999987 6 799999999999999 89998888876654422 453322 2 3321 22233333322
Q ss_pred h--cCCccEEEeccCC
Q 018627 260 T--DGGADYSFECIGD 273 (353)
Q Consensus 260 ~--~~~~dvv~d~~g~ 273 (353)
. .+++|++|+++|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 2478999999984
No 199
>PRK06128 oxidoreductase; Provisional
Probab=96.55 E-value=0.029 Score=51.99 Aligned_cols=79 Identities=24% Similarity=0.286 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--h----HHHHHhCCCceE-e--CCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--K----CEKAKAFGVTEF-L--NPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~----~~~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~-- 260 (353)
.++++||+|+ |++|.+++..+...|+ +|+.+.++.+ . .+.+++.|.... + |..+ ...+.+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 5789999998 8999999999999999 7777655432 1 223344453322 1 2221 222333333221
Q ss_pred cCCccEEEeccCC
Q 018627 261 DGGADYSFECIGD 273 (353)
Q Consensus 261 ~~~~dvv~d~~g~ 273 (353)
-+++|++|.++|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 2379999999874
No 200
>PRK06484 short chain dehydrogenase; Validated
Probab=96.52 E-value=0.03 Score=56.03 Aligned_cols=105 Identities=24% Similarity=0.298 Sum_probs=68.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceE---eCCCCCCccHHHHHHHHh--cCCc
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEF---LNPNDNNEPVQQVIKRIT--DGGA 264 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~ 264 (353)
..|+.+||+|+ +++|..+++.+...|+ +|+++++++++++.+.+ ++.... .|..+ ..+..+.+.+.. -+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35789999998 8999999999999999 89999998887776644 443321 23321 223333333322 2479
Q ss_pred cEEEeccCChH--------------------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627 265 DYSFECIGDTG--------------------------MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 265 dvv~d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
|++|+++|... ..+.++..++.+ |+++.+++...
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~~ 404 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIAS 404 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchhh
Confidence 99999987420 122333455565 99999987433
No 201
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.51 E-value=0.015 Score=52.68 Aligned_cols=78 Identities=21% Similarity=0.255 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCce-E--eCCCCCCccHHHHHHHHhc--CCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~~-~--~~~~~~~~~~~~~~~~~~~--~~~d 265 (353)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+++. +... . .|..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999998 8999999999999999 899998988877666543 3211 1 13221 2233333333222 3789
Q ss_pred EEEeccC
Q 018627 266 YSFECIG 272 (353)
Q Consensus 266 vv~d~~g 272 (353)
+++++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999987
No 202
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.50 E-value=0.053 Score=48.26 Aligned_cols=93 Identities=22% Similarity=0.276 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCC--eEEEEcCC----hhh--------HHHHHhCCCceEeCCCCCCccHHHHHH
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGAS--RIIGVDTN----PEK--------CEKAKAFGVTEFLNPNDNNEPVQQVIK 257 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~--~vi~~~~~----~~~--------~~~~~~~G~~~~~~~~~~~~~~~~~~~ 257 (353)
-.+++++|+|+|+.|..++..+...|++ +++.++++ .++ .+++++++... . ..++.+.++
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHHh
Confidence 4578999999999999999999999997 89999998 443 33444443211 0 113333442
Q ss_pred HHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 258 ~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
.+|+++++++....-...++.+.+. ..+..+..
T Consensus 97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsn 129 (226)
T cd05311 97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALAN 129 (226)
T ss_pred -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCC
Confidence 3899999987322224556777775 65555543
No 203
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.046 Score=49.74 Aligned_cols=77 Identities=22% Similarity=0.312 Sum_probs=49.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce----EeCCCCCCccHHHHHHHHh--cCC
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE----FLNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~----~~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... ..|..+ .....+.+.+.. .++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCC
Confidence 36899998 8999999999999999 888888887765433 3334322 123331 222222222221 237
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|+++|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 204
>PRK04148 hypothetical protein; Provisional
Probab=96.48 E-value=0.089 Score=42.56 Aligned_cols=98 Identities=21% Similarity=0.214 Sum_probs=67.1
Q ss_pred ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
....++.++|++|.| .|..++..+..+|. .|+++|.+++..+.+++.+...+.+--. +.++ .+ -+++|+++
T Consensus 12 ~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~--~~----y~~a~liy 82 (134)
T PRK04148 12 YEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL--EI----YKNAKLIY 82 (134)
T ss_pred cccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH--HH----HhcCCEEE
Confidence 334457889999998 88766666668898 9999999999999998888765543211 1221 11 13799999
Q ss_pred eccCChHHHHHHHHHhccCCceEEEEc
Q 018627 269 ECIGDTGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 269 d~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (353)
.+=..++.....++..++-...++..-
T Consensus 83 sirpp~el~~~~~~la~~~~~~~~i~~ 109 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKINVPLIIKP 109 (134)
T ss_pred EeCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 888777776666666665423444443
No 205
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.014 Score=52.68 Aligned_cols=83 Identities=20% Similarity=0.224 Sum_probs=54.4
Q ss_pred ccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCc--eE--eCCCCCCccHHHHHHHHh--
Q 018627 189 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT--EF--LNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 189 ~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~--~~--~~~~~~~~~~~~~~~~~~-- 260 (353)
...-+++++||+|+ |.+|..++..+...|+ +|++++++++..+.+.+ ..-. .. .|..+ ...+.+.+.+..
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 83 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVER 83 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHH
Confidence 34457899999998 8999999999999999 89999998776665543 2211 12 22221 222222222221
Q ss_pred cCCccEEEeccCC
Q 018627 261 DGGADYSFECIGD 273 (353)
Q Consensus 261 ~~~~dvv~d~~g~ 273 (353)
-+++|+||.+.|.
T Consensus 84 ~~~~d~vi~~ag~ 96 (264)
T PRK12829 84 FGGLDVLVNNAGI 96 (264)
T ss_pred hCCCCEEEECCCC
Confidence 1379999998875
No 206
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.48 E-value=0.017 Score=52.28 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCc-eEe--CCCCCCccHHHHHHHHh--cCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~-~~~--~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
+++++||+|+ +++|..+++.+...|+ +|+.+++++++.+.+.+ ++.. ..+ |..+ ..++...+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 5789999998 8999999999999999 89999999887776644 3321 122 2221 223333333322 23799
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
++++++|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999873
No 207
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.47 E-value=0.031 Score=50.33 Aligned_cols=79 Identities=28% Similarity=0.306 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH---hCCCceE---eCCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---AFGVTEF---LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~---~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.++++||+|+ |++|.++++.+...|+ +|+++++++...+..+ +.+.... .|..+ ..+..+.+.+.. .+.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999998 8999999999999999 8998888754333332 3343321 23321 223333333322 237
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|+++.++|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999999873
No 208
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.016 Score=52.03 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=53.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCC-ceEe--CCCCCCccHHHHHHHHh--c
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV-TEFL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~-~~~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
..++++||+|+ |.+|..++..+...|+ +|+++.+++++++.+.+ .+. ..++ |..+ ..++.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 35789999998 9999999999999999 89999998887654422 221 1222 2221 233333333321 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+.+|+++++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999999883
No 209
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.016 Score=52.47 Aligned_cols=79 Identities=14% Similarity=0.201 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-eE--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EF--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+.. .+ .|..+ ...+.+.+.+.. -+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999998 8899999999999999 99999898876554422 2322 12 23321 222222222221 14
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 210
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.018 Score=51.66 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~--~~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
.++++||+|+ |++|..+++.+...|+ +|+.+.++++..+...++.... . .|..+ ..++.+.+.+.. .+++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999998 8999999999998999 8999988877655554442211 2 23221 223333333221 13789
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
+++.++|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999874
No 211
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.41 E-value=0.02 Score=53.68 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCce----EeCCCCCCccHHHHHHHHhcC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE----FLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~----~~~~~~~~~~~~~~~~~~~~~ 262 (353)
.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.+ .+... ..|..++..+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4899999998 8999999998888999 89999999988765422 22111 123321112334444444444
Q ss_pred -CccEEEeccCC
Q 018627 263 -GADYSFECIGD 273 (353)
Q Consensus 263 -~~dvv~d~~g~ 273 (353)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 57799998873
No 212
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.41 E-value=0.061 Score=49.21 Aligned_cols=104 Identities=18% Similarity=0.258 Sum_probs=65.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChh---hHHHH-HhCCCceE--eCCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~-~~~G~~~~--~~~~~~~~~~~~~~~~~~--~ 261 (353)
.++.+||+|+ +++|+++++.+...|+ +|+.++++++ +.+.+ ++++.... .|..+ .....+.+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4789999986 4899999999999999 8888888753 33333 44553322 23331 223333333332 2
Q ss_pred CCccEEEeccCCh--------------H---------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627 262 GGADYSFECIGDT--------------G---------------MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 262 ~~~dvv~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+.+|++++++|.. + ..+..+..+.++ |+++.+++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~~ 147 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLGG 147 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCCC
Confidence 4799999998831 0 123344556776 99998876543
No 213
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.40 E-value=0.023 Score=56.55 Aligned_cols=73 Identities=22% Similarity=0.253 Sum_probs=55.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
+.+|++|+|+|.|..|++++++++..|+ +|+++|.++++.+.++++|+..+. .. ...+.+. .+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~----~~~~~l~-----~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TS----DAVQQIA-----DYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Cc----chHhHhh-----cCCEEEEC
Confidence 5678999999999999999999999999 999999887777777778874332 11 1112222 47999998
Q ss_pred cCCh
Q 018627 271 IGDT 274 (353)
Q Consensus 271 ~g~~ 274 (353)
.|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 8864
No 214
>PRK09186 flagellin modification protein A; Provisional
Probab=96.39 E-value=0.044 Score=49.12 Aligned_cols=78 Identities=23% Similarity=0.472 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-Hh----CCCce--E--eCCCCCCccHHHHHHHHhc-
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA----FGVTE--F--LNPNDNNEPVQQVIKRITD- 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~----~G~~~--~--~~~~~~~~~~~~~~~~~~~- 261 (353)
.++++||+|+ |++|..++..+...|+ +|+.+.+++++.+.+ ++ ++... + .|..+ ..++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 5789999998 8999999999999999 898888887776543 22 22221 1 23321 2333333433221
Q ss_pred -CCccEEEeccC
Q 018627 262 -GGADYSFECIG 272 (353)
Q Consensus 262 -~~~dvv~d~~g 272 (353)
+++|+++.+.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999985
No 215
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.37 E-value=0.011 Score=54.08 Aligned_cols=99 Identities=18% Similarity=0.257 Sum_probs=60.6
Q ss_pred HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E-eCCCCCCccHHHHHHH
Q 018627 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F-LNPNDNNEPVQQVIKR 258 (353)
Q Consensus 185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~-~~~~~~~~~~~~~~~~ 258 (353)
+.+++++++|++||-+|+| -|..+..+++..|+ +|+++..|+++.+.++ +.|... + +... ++ ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~----D~----~~ 123 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ----DY----RD 123 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----GG
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe----ec----cc
Confidence 4578899999999999986 56677788888899 9999999999988774 456432 1 1111 11 11
Q ss_pred HhcCCccEEEe-----ccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627 259 ITDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 259 ~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (353)
+ .+.||.|+. .+|. +..+....+.|+|+ |++++-.
T Consensus 124 ~-~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 124 L-PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred c-CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 1 227998875 3432 34577777899997 9987543
No 216
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.023 Score=51.64 Aligned_cols=78 Identities=23% Similarity=0.283 Sum_probs=52.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE--eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--DGGADYS 267 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~--~~~~~~~~~~~~~~~~~~--~~~~dvv 267 (353)
++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++.... .|..+ ..++.+.+.... .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 678999998 8999999998888999 898888988877654 33441222 23331 233333333322 2479999
Q ss_pred EeccCC
Q 018627 268 FECIGD 273 (353)
Q Consensus 268 ~d~~g~ 273 (353)
++++|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999874
No 217
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.36 E-value=0.025 Score=49.86 Aligned_cols=102 Identities=19% Similarity=0.242 Sum_probs=65.2
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHh
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRIT 260 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
.+..+++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.++ ++|.+.+.... .+..+... .
T Consensus 70 ~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~---~d~~~~~~--~ 143 (215)
T TIGR00080 70 TELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV---GDGTQGWE--P 143 (215)
T ss_pred HHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE---CCcccCCc--c
Confidence 356678999999999875 46666667766542 26999999998777664 35543321111 11111110 1
Q ss_pred cCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627 261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 261 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (353)
.+.||+|+-....+......++.|+++ |+++..
T Consensus 144 ~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 144 LAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred cCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 237998886554445667788999997 998765
No 218
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.34 E-value=0.054 Score=47.72 Aligned_cols=104 Identities=24% Similarity=0.277 Sum_probs=72.9
Q ss_pred hccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
.++.+..++||=+|.+ +|..++++|..+. -.+++.+++++++.+.+++ .|..+.+.... ..+..+.+.+...+
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~gdal~~l~~~~~~ 131 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-GGDALDVLSRLLDG 131 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-cCcHHHHHHhccCC
Confidence 3556678888888753 6888888888886 3389999999999887744 68776432220 12455555554456
Q ss_pred CccEEEeccC---ChHHHHHHHHHhccCCceEEEE
Q 018627 263 GADYSFECIG---DTGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 263 ~~dvv~d~~g---~~~~~~~~~~~l~~~~G~~v~~ 294 (353)
.||.||--+. .+..++.++++++++ |.+|.=
T Consensus 132 ~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D 165 (219)
T COG4122 132 SFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD 165 (219)
T ss_pred CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence 9998876444 256789999999996 777643
No 219
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.32 E-value=0.036 Score=47.78 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDGGADY 266 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dv 266 (353)
++++++||-+|+| .|..++.+++.....+|++++.+++..+.++ +.+...+-.. ..+..+ +.. .+.||+
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~---~~d~~~-~~~--~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVV---HGRAEE-FGQ--EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEE---eccHhh-CCC--CCCccE
Confidence 4568999999874 3455555555443339999999998776664 3554432111 122221 111 348999
Q ss_pred EEeccCC--hHHHHHHHHHhccCCceEEEEc
Q 018627 267 SFECIGD--TGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 267 v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g 295 (353)
|+-.... ...+..+.+.++++ |+++.+-
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 9974322 35677888999997 9999884
No 220
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.32 E-value=0.026 Score=50.42 Aligned_cols=79 Identities=22% Similarity=0.333 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--hHHHHHhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA 264 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~ 264 (353)
.|+++||+|+ |++|..++..+...|+ +|+.+++++. ..+.+++.+... .+ |..+ ..++...+.+.. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999998 8999999999999999 8988887652 233344455322 22 3221 233333333322 2379
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 221
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.02 Score=51.44 Aligned_cols=79 Identities=22% Similarity=0.254 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ +++|.++++.+...|+ +|++++++.++.+.+. +.+... . .|..+ ..++.+.+.+.. -+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999998 8999999999999999 8999989887765442 223221 1 23321 233333333321 24
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 222
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.30 E-value=0.043 Score=50.58 Aligned_cols=44 Identities=25% Similarity=0.372 Sum_probs=39.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 235 (353)
..+++|+|+|+|+.|.+++..+..+|+++|++++++.+|.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 35689999999999999999999999989999999998877663
No 223
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.053 Score=49.44 Aligned_cols=78 Identities=18% Similarity=0.220 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCc-eEe--CCCCCCccHHHHHHHHh--cCCccE
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~-~~~--~~~~~~~~~~~~~~~~~--~~~~dv 266 (353)
+++|||+|+ |++|..+++.+...|. +|++++++.++++.+.+ ++.. ..+ |..+ ...+.+.+.... -+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 468999998 8999999999888898 89999898887665543 2211 112 2221 223333333221 237899
Q ss_pred EEeccCC
Q 018627 267 SFECIGD 273 (353)
Q Consensus 267 v~d~~g~ 273 (353)
++.++|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999884
No 224
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.29 E-value=0.043 Score=50.38 Aligned_cols=95 Identities=20% Similarity=0.364 Sum_probs=65.9
Q ss_pred hhchhhhHHHHHHHHhccC-CCCCEEEEEcCCh-HHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 173 ~l~~~~~ta~~al~~~~~~-~~g~~vLV~Gag~-vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
.+||+....+..+ +..++ -.|++|+|+|.|. +|.-++.++...|+ +|+.+.+.. .
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~ 193 (286)
T PRK14175 137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------K 193 (286)
T ss_pred CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------h
Confidence 3454433333333 44442 3699999999865 99999999999999 888885431 1
Q ss_pred cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
++.+.++ .+|+||.++|.+..+.. ..++++ ..++.+|...
T Consensus 194 ~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 194 DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 2333333 38999999998766655 458886 8889998754
No 225
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.29 E-value=0.029 Score=46.44 Aligned_cols=98 Identities=20% Similarity=0.213 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
..+++++|+|+|.+|..+++.+...|..+|++++++.++.+.+ ++++... +... ..+..+. -+++|+|+.|
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~--~~~~~~~-----~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIA--YLDLEEL-----LAEADLIINT 88 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-ccee--ecchhhc-----cccCCEEEeC
Confidence 4578999999999999999999888644899999998876654 4455321 0000 1111111 1369999999
Q ss_pred cCChHH----HHHHHHHhccCCceEEEEcCCC
Q 018627 271 IGDTGM----ITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 271 ~g~~~~----~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
++.... .......++++ ..++.++..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~~ 119 (155)
T cd01065 89 TPVGMKPGDELPLPPSLLKPG-GVVYDVVYNP 119 (155)
T ss_pred cCCCCCCCCCCCCCHHHcCCC-CEEEEcCcCC
Confidence 886432 11122446675 7777776553
No 226
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.28 E-value=0.013 Score=54.06 Aligned_cols=75 Identities=13% Similarity=0.104 Sum_probs=51.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-EeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
.++++||+|+|+.+.+++..+..+|+++|+++.|+.+|.+.+.+ ++... +.... .+ +.+... -..+|+|++|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~~-~~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLAI-EKAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhhc-ccCCCEEEEC
Confidence 57899999999999999999999999899999999888776633 33211 11110 00 111111 1368999999
Q ss_pred cCC
Q 018627 271 IGD 273 (353)
Q Consensus 271 ~g~ 273 (353)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
No 227
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.28 E-value=0.042 Score=51.24 Aligned_cols=92 Identities=21% Similarity=0.416 Sum_probs=62.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~ 273 (353)
.+|.|+|.|.+|.+.+..++..|. .+|+++++++++.+.+++.|...... .+..+.+ ...|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence 679999999999999999888884 37999999999988888887532211 1122222 258999999876
Q ss_pred hHH---HHHHHHHhccCCceEEEEcCC
Q 018627 274 TGM---ITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 274 ~~~---~~~~~~~l~~~~G~~v~~g~~ 297 (353)
... +......++++ ..++.+|..
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs~ 102 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGSV 102 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCccc
Confidence 322 22223345664 666676653
No 228
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.025 Score=51.70 Aligned_cols=79 Identities=23% Similarity=0.278 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--E--eCCCCCCccHHHHHHHHhc--CCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRITD--GGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~--~~~~~~~~~~~~~~~~~~~--~~~d 265 (353)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.+..... . .|..+ ...+.+.+..... +.+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3578999998 8999999999999999 8999999988877665432211 1 23321 2223333333221 3689
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
++++++|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999885
No 229
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.28 E-value=0.07 Score=47.78 Aligned_cols=76 Identities=14% Similarity=0.295 Sum_probs=51.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-E--eCCCCCCccHHHHHHHHhc--CCccEEE
Q 018627 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRITD--GGADYSF 268 (353)
Q Consensus 196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~--~~~~~~~~~~~~~~~~~~~--~~~dvv~ 268 (353)
++||+|+ |++|.+++..+...|+ +|+++++++++.+.+.+ ++... . .|..+ ..++.+.+..... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899997 8999999999999999 89999999887766543 34322 1 23221 2233333333221 3799999
Q ss_pred eccCC
Q 018627 269 ECIGD 273 (353)
Q Consensus 269 d~~g~ 273 (353)
.++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 230
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.27 E-value=0.048 Score=48.70 Aligned_cols=108 Identities=19% Similarity=0.203 Sum_probs=75.2
Q ss_pred HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC----CCceEeCCCCCCccHHHHHHHHh
Q 018627 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRIT 260 (353)
Q Consensus 185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
+.+.....+|++||=+++| .|-.+..+++..|-.+|+++|.++.-++.+++- |... +.+. ..+ ++.+. +.
T Consensus 43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv--~~d-Ae~LP-f~ 116 (238)
T COG2226 43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFV--VGD-AENLP-FP 116 (238)
T ss_pred HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEE--Eec-hhhCC-CC
Confidence 3445566799999999775 688999999999766999999999988887652 2221 1110 111 11222 23
Q ss_pred cCCccEEEeccCC------hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 261 DGGADYSFECIGD------TGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 261 ~~~~dvv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+..||+|.-+.|- +..+.+..+-++|+ |+++.+.....
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 3489988876663 45688889999997 99998887654
No 231
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.27 E-value=0.026 Score=51.94 Aligned_cols=140 Identities=20% Similarity=0.237 Sum_probs=78.6
Q ss_pred ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHh-ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEc
Q 018627 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225 (353)
Q Consensus 147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~ 225 (353)
+|.+|..-....++++.+++.+-.. ..-+|.+ +|.-. .-+++|++||-+|+| .|..++. +..+|++.|+++|
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~l-cL~~Le~~~~~g~~vlDvGcG-SGILaIA-a~kLGA~~v~g~D 192 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFGTG----THPTTSL-CLEALEKLLKKGKTVLDVGCG-SGILAIA-AAKLGAKKVVGVD 192 (300)
T ss_pred CCccCCCCCCceEEEEccccccCCC----CChhHHH-HHHHHHHhhcCCCEEEEecCC-hhHHHHH-HHHcCCceEEEec
Confidence 3444432223567777777644322 1222222 22111 125699999999975 2444433 4456888999999
Q ss_pred CChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh---HHHHHHHHHhccCCceEEEEcCCC
Q 018627 226 TNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 226 ~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
.++-..+.+++ -+.... +... ..+ ......++.||+|+-++=.. .........++|+ |++++.|-..
T Consensus 193 iDp~AV~aa~eNa~~N~v~~~-~~~~-~~~---~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 193 IDPQAVEAARENARLNGVELL-VQAK-GFL---LLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred CCHHHHHHHHHHHHHcCCchh-hhcc-ccc---chhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 99876665544 233320 0000 000 11111234899999776321 2356667889997 9999999765
Q ss_pred C
Q 018627 299 L 299 (353)
Q Consensus 299 ~ 299 (353)
.
T Consensus 267 ~ 267 (300)
T COG2264 267 D 267 (300)
T ss_pred h
Confidence 5
No 232
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.26 E-value=0.063 Score=46.40 Aligned_cols=76 Identities=29% Similarity=0.365 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CCceE-eCCCCCCccHHHHHHHHhcCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTEF-LNPNDNNEPVQQVIKRITDGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~~~~-~~~~~~~~~~~~~~~~~~~~~~d 265 (353)
.+.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ + +..-. .+.. +..++.+.+ .+.|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~-----~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETS-DDAARAAAI-----KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC-CHHHHHHHH-----hcCC
Confidence 5789999997 9999999988888897 89988898887765533 2 22211 1111 012222222 2589
Q ss_pred EEEeccCChH
Q 018627 266 YSFECIGDTG 275 (353)
Q Consensus 266 vv~d~~g~~~ 275 (353)
+||.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999887543
No 233
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.25 E-value=0.027 Score=50.25 Aligned_cols=78 Identities=29% Similarity=0.372 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHhc--C
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~~--~ 262 (353)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... . .|..+ ...+.+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999999999 899998888765543 2334332 1 22221 2233333333222 3
Q ss_pred CccEEEeccC
Q 018627 263 GADYSFECIG 272 (353)
Q Consensus 263 ~~dvv~d~~g 272 (353)
++|++|+++|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 7899999987
No 234
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.031 Score=51.67 Aligned_cols=79 Identities=19% Similarity=0.350 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|.++++.+...|+ +|++++++.++++.+.+ .+... .+ |..+ ..++.+.+.... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4688999998 8999999999988999 89999999877654422 23322 22 2221 223333333221 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|++++++|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 235
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.029 Score=50.89 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CCce-E--eCCCCCCccHHHHHHHHh-cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-F--LNPNDNNEPVQQVIKRIT-DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~~~-~--~~~~~~~~~~~~~~~~~~-~~ 262 (353)
.|+++||+|+ +++|.++++.+...|+ +|+++++++++++.+.+ + +... . .|..+ ..+..+.+.+.. -+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 5789999998 8999999999999999 89999998877654432 1 3221 2 23321 223333333321 24
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++++++|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999999874
No 236
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.22 E-value=0.16 Score=44.38 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=59.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
.|++|||+|+|.+|...+..+...|+ +|+++.... +.+..+.+.+.-..... .+.+. .-.++|+||-++
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~~~~~-----~~~~~----~l~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIRWKQK-----EFEPS----DIVDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEEEEec-----CCChh----hcCCceEEEEcC
Confidence 57899999999999999988888898 888885432 12222222222111111 11100 012689999998
Q ss_pred CChHHHHHHHHHhccCCceEEEEcCCCCCCcee
Q 018627 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304 (353)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 304 (353)
+.++ ++..+...... +.++.....+...++-
T Consensus 79 ~d~e-lN~~i~~~a~~-~~lvn~~d~~~~~~f~ 109 (202)
T PRK06718 79 NDPR-VNEQVKEDLPE-NALFNVITDAESGNVV 109 (202)
T ss_pred CCHH-HHHHHHHHHHh-CCcEEECCCCccCeEE
Confidence 8754 55555544454 6677775544434443
No 237
>PRK06484 short chain dehydrogenase; Validated
Probab=96.21 E-value=0.054 Score=54.26 Aligned_cols=79 Identities=18% Similarity=0.339 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce---EeCCCCCCccHHHHHHHHh--cCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~---~~~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
.++++||+|+ +++|.++++.+...|+ +|+.++++.++++.+ ++++... ..|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999998 8899999999999999 999998888876654 4455432 123321 233333333322 24799
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
+++++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
No 238
>PRK06398 aldose dehydrogenase; Validated
Probab=96.21 E-value=0.047 Score=49.32 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~--~~~~dvv~ 268 (353)
.|+++||+|+ +++|.+++..+...|+ +|+.+++++++.. .... ..|..+ ..++.+.+.+.. .+.+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999998 8999999999999999 8988888765432 1111 123321 233333333332 23799999
Q ss_pred eccCC
Q 018627 269 ECIGD 273 (353)
Q Consensus 269 d~~g~ 273 (353)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
No 239
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.19 E-value=0.085 Score=49.64 Aligned_cols=96 Identities=14% Similarity=0.107 Sum_probs=66.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHH-HHCCCCeEEEEcCChhhHHHHHh-----CCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGA-KARGASRIIGVDTNPEKCEKAKA-----FGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la-~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
....++++|+|+|..|...+..+ ...++++|.+.++++++.+.+.+ ++.. +..+ .++.+.++ ..
T Consensus 124 ~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~----~~~~~~~~-----~a 193 (325)
T PRK08618 124 REDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV----NSADEAIE-----EA 193 (325)
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe----CCHHHHHh-----cC
Confidence 34568899999999998777554 45688899999999988765532 3432 2212 22333332 48
Q ss_pred cEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
|+|+.|++....+- . ..++++ -++..+|....
T Consensus 194 DiVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~p 225 (325)
T PRK08618 194 DIIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFMP 225 (325)
T ss_pred CEEEEccCCCCcch-H-HhcCCC-cEEEecCCCCc
Confidence 99999998754433 3 788996 88889998654
No 240
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.19 E-value=0.052 Score=48.61 Aligned_cols=79 Identities=25% Similarity=0.356 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+... . .|..+ ..++.+.+.... .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4679999997 8999999999888999 899998888766543 2233222 1 23321 223333333321 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|.+++.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 241
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.17 E-value=0.048 Score=48.32 Aligned_cols=96 Identities=18% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE--eCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSFE 269 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~dvv~d 269 (353)
-+|.+||-+|+| .|+....+ ..+|+ +|+++|.+++..+.++......- ++|. ....+.+... ++.||+|+.
T Consensus 58 l~g~~vLDvGCG-gG~Lse~m-Ar~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~---~~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCG-GGILSEPL-ARLGA-SVTGIDASEKPIEVAKLHALESGVNIDYR---QATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCC-ccHhhHHH-HHCCC-eeEEecCChHHHHHHHHhhhhccccccch---hhhHHHHHhc-CCCccEEEE
Confidence 488999999984 14444444 44588 99999999999999876543332 3343 2233333321 249999885
Q ss_pred -----ccCCh-HHHHHHHHHhccCCceEEEEc
Q 018627 270 -----CIGDT-GMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 270 -----~~g~~-~~~~~~~~~l~~~~G~~v~~g 295 (353)
.+..+ ..+..+.++++|+ |.++..-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 44443 3567888999997 9887763
No 242
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.031 Score=50.13 Aligned_cols=74 Identities=18% Similarity=0.166 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-E--eCCCCCCccHHHHHHHHhcCCcc
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRITDGGAD 265 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~--~~~~~~~~~~~~~~~~~~~~~~d 265 (353)
++++||+|+ |++|..+++.+...|+ +|+++.+++++.+.+++ .+..- + .|.. +. +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~-~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT----DA-IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCC----CH-HHHHHHhcCCCC
Confidence 468999998 8999999999999999 89988888776654432 23221 1 1222 11 233333344899
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
++|.+.|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99999873
No 243
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.15 E-value=0.042 Score=48.71 Aligned_cols=78 Identities=17% Similarity=0.206 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-HHHHHhCCCceE-eCCCCCCccHHHHHHHHhc--CCccEEE
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEF-LNPNDNNEPVQQVIKRITD--GGADYSF 268 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~--~~~dvv~ 268 (353)
++++||+|+ +++|..+++.+...|+ +|+++++++++ .+.+++.|+..+ .|..+ ..+..+.+..... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999998 8999999999989999 88888877643 344455554322 23221 2333333333322 3699999
Q ss_pred eccCC
Q 018627 269 ECIGD 273 (353)
Q Consensus 269 d~~g~ 273 (353)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 99874
No 244
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.14 E-value=0.11 Score=47.38 Aligned_cols=107 Identities=17% Similarity=0.216 Sum_probs=73.4
Q ss_pred HHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-E-eCCCCCCccHHHH
Q 018627 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F-LNPNDNNEPVQQV 255 (353)
Q Consensus 182 ~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~-~~~~~~~~~~~~~ 255 (353)
+..+.+..++++|++||=+|+| =|.+++.+|+..|+ +|++++.|+++.+.+++ .|... + +...+ -.+
T Consensus 61 ~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d-~rd---- 133 (283)
T COG2230 61 LDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD-YRD---- 133 (283)
T ss_pred HHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-ccc----
Confidence 3345688999999999999985 46777788888899 99999999998877644 56552 1 11111 011
Q ss_pred HHHHhcCCccEEEe-----ccCC---hHHHHHHHHHhccCCceEEEEcCCCCC
Q 018627 256 IKRITDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLGVPKLK 300 (353)
Q Consensus 256 ~~~~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (353)
..+.||.|+. .+|. +..+..+.+.|+++ |++++-......
T Consensus 134 ----~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 ----FEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred ----cccccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 1235787764 3443 35677788899997 998876655443
No 245
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.077 Score=48.94 Aligned_cols=80 Identities=20% Similarity=0.206 Sum_probs=48.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-H----HHHHhCCCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-C----EKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-~----~~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~-- 260 (353)
-.++++||+|+ |++|..++..+...|+ +|+.+.+++++ . +.++..|... .+ |..+ ...+.+.+.+..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 35789999998 8999999999988999 88888766432 2 2223334322 12 2221 222323333221
Q ss_pred cCCccEEEeccCC
Q 018627 261 DGGADYSFECIGD 273 (353)
Q Consensus 261 ~~~~dvv~d~~g~ 273 (353)
.+++|++|.++|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 1378999998874
No 246
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.034 Score=49.96 Aligned_cols=79 Identities=20% Similarity=0.309 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ +++|..++..+...|+ +|+.+++++++.+.+ ++.+... .+ |..+ .....+.+.+.. -+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999998 8999999999999999 899988888776544 2334322 22 3221 222223333322 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|+++.++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 247
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.033 Score=49.75 Aligned_cols=79 Identities=23% Similarity=0.342 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+... . .|..+ ...+.....+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4688999998 9999999999988999 899998887655433 2222221 1 23221 222222222221 13
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 68999999883
No 248
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.11 E-value=0.02 Score=52.48 Aligned_cols=98 Identities=17% Similarity=0.206 Sum_probs=70.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC--
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG-- 272 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g-- 272 (353)
.+|.|+|+|.+|.-++.+|..+|+ +|...+.+.+|+..+..+-...+........++.+.++ +.|+++.++=
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLIp 242 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLIP 242 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEec
Confidence 457788999999999999999999 99999999999999977433332222112445555554 4898888652
Q ss_pred C---h-HHHHHHHHHhccCCceEEEEcCCCC
Q 018627 273 D---T-GMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 273 ~---~-~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+ | -..++.++.|+|+ +.+|++....+
T Consensus 243 gakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred CCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 1 1 2356778999997 99998875444
No 249
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.11 E-value=0.057 Score=49.76 Aligned_cols=44 Identities=25% Similarity=0.342 Sum_probs=38.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 235 (353)
..++++||+|+|+.+.+++..+..+|+++++++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999999999999999888899989999999998877663
No 250
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.11 E-value=0.037 Score=49.79 Aligned_cols=79 Identities=18% Similarity=0.257 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS 267 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv 267 (353)
.++++||+|+ |++|.++++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+ ..+..+.+.... .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 8999999999999999 7766544 4444555544443322 23321 333333333322 2379999
Q ss_pred EeccCC
Q 018627 268 FECIGD 273 (353)
Q Consensus 268 ~d~~g~ 273 (353)
+.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 999874
No 251
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.09 E-value=0.031 Score=50.25 Aligned_cols=79 Identities=22% Similarity=0.341 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh--HHHHHhCCCce-E--eCCCCCCccHHHHHHHHh--cCCc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA 264 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~ 264 (353)
.++++||+|+ +++|.++++.+...|+ +|+++++++.. .+.+++.+... . .|..+ ..++.+.+.+.. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999998 8999999999999999 88888765422 23344455332 1 23331 333333333322 2479
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
No 252
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.035 Score=50.82 Aligned_cols=79 Identities=25% Similarity=0.293 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|.+++..+...|+ +|+++++++++++.+ ++.|... .+ |..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999997 8999999999999999 888888887765543 2234322 12 2221 223333333221 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 78999999873
No 253
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.08 E-value=0.037 Score=49.71 Aligned_cols=79 Identities=25% Similarity=0.390 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.|... .+ |..+ ..++.+.+.... .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999998 9999999999988999 899998888765433 2333222 12 3321 223333333321 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|++|.++|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 254
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.08 E-value=0.078 Score=47.92 Aligned_cols=78 Identities=17% Similarity=0.363 Sum_probs=48.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hhHHHH-HhC-CCc-eE--eCCCCCCccHHHHHHHHhc
Q 018627 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAF-GVT-EF--LNPNDNNEPVQQVIKRITD 261 (353)
Q Consensus 193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~---~~~~~~-~~~-G~~-~~--~~~~~~~~~~~~~~~~~~~ 261 (353)
.|+++||+|+ +++|.++++.+...|+ +|+.+.+++ ++++.+ +++ +.. .. .|..+ ..+..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 5789999986 4899999999999999 888876543 333333 333 211 11 23321 2333333333322
Q ss_pred --CCccEEEeccC
Q 018627 262 --GGADYSFECIG 272 (353)
Q Consensus 262 --~~~dvv~d~~g 272 (353)
+++|++++++|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999999886
No 255
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.02 Score=51.92 Aligned_cols=77 Identities=22% Similarity=0.400 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~ 268 (353)
.+++++|+|+ |++|..+++.+...|+ +|++++++.++.+... +...+ .|..+ ..++.+.+.... .+.+|++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD-DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence 3568999998 8999999999988999 8999988876654321 22221 23321 333444444332 23789999
Q ss_pred eccCC
Q 018627 269 ECIGD 273 (353)
Q Consensus 269 d~~g~ 273 (353)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99984
No 256
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.07 E-value=0.044 Score=52.77 Aligned_cols=97 Identities=23% Similarity=0.305 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHH-HHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
-.++++||+|+|-+|..++..+...|.+.|+..-|..+|... ++++|+.. +.+ .++.+.+. .+|+||.+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l----~el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VAL----EELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecH----HHHHHhhh-----hCCEEEEe
Confidence 478899999999999999999999998899999999888764 47788443 222 22333333 49999999
Q ss_pred cCChHHH---HHHHHHhccCCc-eEEEEcCCC
Q 018627 271 IGDTGMI---TTALQSCCDGWG-LAVTLGVPK 298 (353)
Q Consensus 271 ~g~~~~~---~~~~~~l~~~~G-~~v~~g~~~ 298 (353)
++.+..+ ......++.... -+++++.+.
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 8875431 222234444312 466776653
No 257
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.052 Score=48.99 Aligned_cols=81 Identities=20% Similarity=0.347 Sum_probs=51.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhh-HHH----HHhCCCc--eEe--CCCCCCccHHHHHHHH
Q 018627 191 ISKGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEK-CEK----AKAFGVT--EFL--NPNDNNEPVQQVIKRI 259 (353)
Q Consensus 191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~-~~~----~~~~G~~--~~~--~~~~~~~~~~~~~~~~ 259 (353)
+..+++|||+|+ |++|.++++-+...| + +|+++++++++ ++. +++.+.. .++ |..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456789999998 899999998877774 7 89888888765 332 3333421 222 3321 23333333333
Q ss_pred hc-CCccEEEeccCC
Q 018627 260 TD-GGADYSFECIGD 273 (353)
Q Consensus 260 ~~-~~~dvv~d~~g~ 273 (353)
.. +.+|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 489999988765
No 258
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.041 Score=49.56 Aligned_cols=78 Identities=17% Similarity=0.170 Sum_probs=51.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCC--c-eE--eCCCCCCccHHHHHHHHh--cCCc
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV--T-EF--LNPNDNNEPVQQVIKRIT--DGGA 264 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~--~-~~--~~~~~~~~~~~~~~~~~~--~~~~ 264 (353)
++++||+|+ |++|..++..+...|+ +|++++++.++++.+.+ +.. . .. .|..+ ..++.+.+.... .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999997 8999999999998999 89999998887765533 221 1 11 23321 233333333322 2368
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|+++.++|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 259
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.04 E-value=0.17 Score=44.26 Aligned_cols=101 Identities=17% Similarity=0.152 Sum_probs=63.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-hHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
.|++|||+|+|.+|..-++.+...|+ +|++++.... .+..+.+.|--..+.-. .. ...+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~~~---~~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLARC---FD-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEeCC---CC-HHHh-----CCcEEEEECC
Confidence 47899999999999999999999999 8888855432 33333344422222111 11 1111 3699999998
Q ss_pred CChHHHHHHHHHhccCCceEEEEcCCCCCCcee
Q 018627 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304 (353)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 304 (353)
+.+..-.......+.. |..|.+-......++.
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~ 109 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFI 109 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEE
Confidence 8865545555666664 8888765544434443
No 260
>PRK06196 oxidoreductase; Provisional
Probab=96.03 E-value=0.043 Score=51.19 Aligned_cols=79 Identities=22% Similarity=0.301 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceEe--CCCCCCccHHHHHHHHh--cCCccE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~dv 266 (353)
.+++|||+|+ |++|.+++..+...|+ +|++++++.++.+.+. ++.....+ |..+ ..++.+.+.+.. .+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4689999998 8999999999988999 8999989887765442 22211222 3221 223333333322 247999
Q ss_pred EEeccCC
Q 018627 267 SFECIGD 273 (353)
Q Consensus 267 v~d~~g~ 273 (353)
+|+++|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999873
No 261
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.045 Score=49.49 Aligned_cols=79 Identities=27% Similarity=0.384 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C--CCc-eEe--CCCCCCccHHHHHHHHh-cCCc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRIT-DGGA 264 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--G~~-~~~--~~~~~~~~~~~~~~~~~-~~~~ 264 (353)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ + +.. ..+ |..+ ...+.+...... .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4678999987 8999999999999999 89999998887665532 1 211 122 2221 122222222211 2478
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|+++.++|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999999874
No 262
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.039 Score=49.51 Aligned_cols=79 Identities=19% Similarity=0.248 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|..++..+...|+ +|+++++++++.+.+.+ .+... . .|.. +...+...+.+.. -+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDIT-DEDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCC-CHHHHHHHHHHHHHHcC
Confidence 5788999998 8999999999999999 89999888876654422 23221 1 2222 1233333333321 13
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998874
No 263
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.054 Score=48.13 Aligned_cols=80 Identities=26% Similarity=0.321 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce----EeCCCCC-CccH---HHHHHHH
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE----FLNPNDN-NEPV---QQVIKRI 259 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~----~~~~~~~-~~~~---~~~~~~~ 259 (353)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. +.+... ..|..+. ..++ .+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999998 8999999999999999 8999999887765442 222111 1222110 1122 2233333
Q ss_pred hcCCccEEEeccCC
Q 018627 260 TDGGADYSFECIGD 273 (353)
Q Consensus 260 ~~~~~dvv~d~~g~ 273 (353)
..+.+|++|.++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33578999999884
No 264
>PRK07985 oxidoreductase; Provisional
Probab=96.00 E-value=0.1 Score=48.29 Aligned_cols=103 Identities=16% Similarity=0.159 Sum_probs=61.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~-- 260 (353)
.++++||+|+ +++|.++++.+...|+ +|+++.++. ++.+.+ ++.|... . .|..+ ..++.+.+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5689999998 8999999999999999 888876542 233222 2334322 1 23321 223333333322
Q ss_pred cCCccEEEeccCCh--------------------------HHHHHHHHHhccCCceEEEEcCCC
Q 018627 261 DGGADYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 261 ~~~~dvv~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
-+++|+++.+.|.. ..++.++..++.+ |++|.+++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~ 188 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQ 188 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCch
Confidence 23789999987731 1122333445665 8999987643
No 265
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.00 E-value=0.039 Score=49.59 Aligned_cols=79 Identities=20% Similarity=0.301 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+.... + |..+ ...+.+.+.... .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999999999 888888888655433 33454322 1 2221 222222222221 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.++|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999999874
No 266
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.99 E-value=0.016 Score=56.94 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=63.5
Q ss_pred HhccCCCCCEEE----EEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHh
Q 018627 187 NVADISKGSTVV----IFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT 260 (353)
Q Consensus 187 ~~~~~~~g~~vL----V~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~ 260 (353)
...++++|+++| |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+... +++.. ...+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDAT--GITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECC--CCCCHHHHHHHH
Confidence 456778899988 8876 9999999999999999 8998866666444333344442 33332 222233333221
Q ss_pred cCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 261 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
......++.+.++ |+++.++....
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~~ 127 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPPE 127 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEccccc
Confidence 3456677888886 99999987544
No 267
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.052 Score=47.96 Aligned_cols=74 Identities=18% Similarity=0.247 Sum_probs=49.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ ..++.+.+... .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHH-hhcCcEEEECCC
Confidence 5899987 8999999999988999 898898988877655 34444332 23321 22333333322 236899999865
No 268
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.99 E-value=0.085 Score=49.30 Aligned_cols=95 Identities=12% Similarity=0.148 Sum_probs=60.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (353)
Q Consensus 196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~ 273 (353)
+|||+|+ |.+|..+++.+...|. +|+++.++.++...+...++..+. |.. +. +.+..... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~--d~---~~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLS--LP---ETLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCC--CH---HHHHHHHC-CCCEEEECCCC
Confidence 6999998 8999999999999998 899888887766655555654332 222 11 12222222 58999998753
Q ss_pred hH------------HHHHHHHHhccC-CceEEEEcCC
Q 018627 274 TG------------MITTALQSCCDG-WGLAVTLGVP 297 (353)
Q Consensus 274 ~~------------~~~~~~~~l~~~-~G~~v~~g~~ 297 (353)
.. .....++.++.. -.++|.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 11 112333444443 1378887764
No 269
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.057 Score=48.00 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=52.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHHhc--
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~~~-- 261 (353)
..++++||+|+ |.+|..++..+...|. +|+++++++++.+.+.+ .+... .+ |..+ ..++...+.....
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 34678999997 8999999999999999 89999998876654422 23221 22 2221 2233333333221
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|+++.++|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 369999999874
No 270
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.97 E-value=0.045 Score=48.52 Aligned_cols=79 Identities=25% Similarity=0.382 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHhc--C
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRITD--G 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~~--~ 262 (353)
++++|||+|+ |.+|..++..+...|. +|+++.+++++.+.+ ++.+.... .|..+ ...+.+.+.+... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4578999998 9999999999988999 799999988765433 33443322 23321 2233333333221 3
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|.++.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999999864
No 271
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.045 Score=49.65 Aligned_cols=78 Identities=23% Similarity=0.273 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.. .+.+... . .|..+ ..++...+.+.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999998 8999999999999999 899998887765433 2233221 1 23321 223333333332 23
Q ss_pred CccEEEeccC
Q 018627 263 GADYSFECIG 272 (353)
Q Consensus 263 ~~dvv~d~~g 272 (353)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 7899998876
No 272
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.96 E-value=0.022 Score=47.47 Aligned_cols=79 Identities=24% Similarity=0.309 Sum_probs=50.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC--hhhHHHH----HhCCCceE-eCCCC-CCccHHHHHHHHh--cCC
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN--PEKCEKA----KAFGVTEF-LNPND-NNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~--~~~~~~~----~~~G~~~~-~~~~~-~~~~~~~~~~~~~--~~~ 263 (353)
+++||+|+ +++|..+++.+...|.++|+.+.++ .++.+.+ +..+.... +..+. +..++...+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899998 8999999999988877688999888 4444433 44453222 21111 1233333444332 348
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.|.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999886
No 273
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.044 Score=49.36 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C-----CCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F-----GVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----G~~~-~~--~~~~~~~~~~~~~~~~~-- 260 (353)
.++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ + +... .+ |..+ ..++...+....
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4789999998 8999999999999999 89999888876654422 1 2111 12 3221 223333333322
Q ss_pred cCCccEEEeccCC
Q 018627 261 DGGADYSFECIGD 273 (353)
Q Consensus 261 ~~~~dvv~d~~g~ 273 (353)
.+.+|+++.++|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999999884
No 274
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.041 Score=49.77 Aligned_cols=79 Identities=22% Similarity=0.289 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCceE----eCCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTEF----LNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~~----~~~~~~~~~~~~~~~~~~-- 260 (353)
.|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+ .+...+ .|..+ ..+..+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4789999998 8999999999999999 89999898876654321 221121 23321 222333333222
Q ss_pred cCCccEEEeccCC
Q 018627 261 DGGADYSFECIGD 273 (353)
Q Consensus 261 ~~~~dvv~d~~g~ 273 (353)
-+.+|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999984
No 275
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.96 E-value=0.15 Score=44.15 Aligned_cols=105 Identities=15% Similarity=0.190 Sum_probs=62.1
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD 261 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
....++.++++||=.|+| .|..++.+++.....+|++++.+++..+.+++ ++...+.... .+..+.+....
T Consensus 33 ~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhCC-
Confidence 345577889999888864 34445555655432399999999988777643 5554321111 12222222221
Q ss_pred CCccE-EEeccCC-hHHHHHHHHHhccCCceEEEEcC
Q 018627 262 GGADY-SFECIGD-TGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 262 ~~~dv-v~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
..+|. +++.... ...++.+.+.|+++ |+++....
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 23444 4443222 35678888899997 99888754
No 276
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.96 E-value=0.11 Score=45.37 Aligned_cols=90 Identities=27% Similarity=0.333 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
-.|++|+|+|.|.+|..+++.+...|+ +|++++++.++.+.+++ +|+. .++.. .+ .....|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~--------~l---~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPE--------EI---YSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcch--------hh---ccccCCEEEec
Confidence 367899999999999999999999999 89999999888776654 4643 22221 11 11258898877
Q ss_pred cCChHHHHHHHHHhccCCceEEEEcC
Q 018627 271 IGDTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
......-...++.++. ..++.-++
T Consensus 93 A~~~~I~~~~~~~l~~--~~v~~~AN 116 (200)
T cd01075 93 ALGGVINDDTIPQLKA--KAIAGAAN 116 (200)
T ss_pred ccccccCHHHHHHcCC--CEEEECCc
Confidence 6543444555566653 34444433
No 277
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.043 Score=49.17 Aligned_cols=79 Identities=20% Similarity=0.373 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++.+.+.... .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4789999998 8999999998888999 899998987765433 3334322 2 22221 222323222221 24
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 278
>PRK06194 hypothetical protein; Provisional
Probab=95.95 E-value=0.038 Score=50.62 Aligned_cols=79 Identities=23% Similarity=0.318 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|..++..+...|+ +|++++++.++.+.. +..+..- .+ |..+ ..++.+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999997 8999999999999999 899998887655433 2223322 12 2221 223333333221 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|+++|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 78999999885
No 279
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.041 Score=49.35 Aligned_cols=78 Identities=26% Similarity=0.300 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCc-eEe--CCCCCCccHHHHHHHHh--cCC
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~-~~~--~~~~~~~~~~~~~~~~~--~~~ 263 (353)
|+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. +.+.. ..+ |.. +...+.+.+.+.. -+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR-NPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-CHHHHHHHHHHHHHHhCC
Confidence 578999988 8899999999999999 8999988887665442 22322 122 322 1233333333321 237
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|+++++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999999873
No 280
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.94 E-value=0.046 Score=49.92 Aligned_cols=79 Identities=20% Similarity=0.310 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhhHH---HH-HhCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCE---KA-KAFGVTEFL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~~~---~~-~~~G~~~~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
.++.+||+|+ + ++|.++++.+...|+ +|+.++++++..+ .+ ++.|....+ |..+ ..+..+.+.+.. -
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 5789999998 4 899999999999999 8888877653322 22 334543222 3321 222333333322 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+.+|++++++|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999873
No 281
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.94 E-value=0.16 Score=46.27 Aligned_cols=105 Identities=16% Similarity=0.184 Sum_probs=61.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------hHHH----HHhCCCc-eEeCCCCC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------KCEK----AKAFGVT-EFLNPNDN 248 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-------------------~~~~----~~~~G~~-~~~~~~~~ 248 (353)
.+.+|+|+|+|++|..++..+...|.++++.+|.+.- |.+. ++++... .+..+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~-- 106 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD-- 106 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe--
Confidence 5678999999999999999999999889999976531 1111 1222211 111111
Q ss_pred CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+.-..+.+..+....+|+|+||+.....-....+.+....-.++.+|...+
T Consensus 107 ~~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag~ 157 (268)
T PRK15116 107 DFITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGG 157 (268)
T ss_pred cccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCccc
Confidence 000012222333347999999998744433344444443145676766544
No 282
>PLN00203 glutamyl-tRNA reductase
Probab=95.92 E-value=0.071 Score=53.26 Aligned_cols=99 Identities=17% Similarity=0.329 Sum_probs=63.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
.+.+|+|+|+|.+|.++++.+...|+++|+++.++.++.+.+.+ ++...+.... ..+..+.+ ...|+||.|+
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~--~~dl~~al-----~~aDVVIsAT 337 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP--LDEMLACA-----AEADVVFTST 337 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec--HhhHHHHH-----hcCCEEEEcc
Confidence 37899999999999999999999998789999999888776644 5321111100 11222222 2589999998
Q ss_pred CChHH--HHHHHHHhccC---Cc---eEEEEcCCC
Q 018627 272 GDTGM--ITTALQSCCDG---WG---LAVTLGVPK 298 (353)
Q Consensus 272 g~~~~--~~~~~~~l~~~---~G---~~v~~g~~~ 298 (353)
+.+.. ....++.+.+. .+ .+++++.+.
T Consensus 338 ~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 338 SSETPLFLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred CCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 76432 34444444321 02 477777653
No 283
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.91 E-value=0.048 Score=52.54 Aligned_cols=93 Identities=23% Similarity=0.304 Sum_probs=58.1
Q ss_pred EEEEcCChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHh--CCCce-EeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627 197 VVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA--FGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 197 vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~--~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
|+|+|+|.+|..+++.+....-. +|++.+++.++++.+.+ .+... .+..+ ..+.. .+.++.. +.|+|++|+|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d--~~~~~-~l~~~~~-~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVD--VNDPE-SLAELLR-GCDVVINCAG 76 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE----TTTHH-HHHHHHT-TSSEEEE-SS
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEe--cCCHH-HHHHHHh-cCCEEEECCc
Confidence 68999999999999999888643 89999999999887754 22211 11111 12222 2444433 4699999998
Q ss_pred ChHHHHHHHHHhccCCceEEEE
Q 018627 273 DTGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~ 294 (353)
......-+-.++..+ -++++.
T Consensus 77 p~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 77 PFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp GGGHHHHHHHHHHHT--EEEES
T ss_pred cchhHHHHHHHHHhC-CCeecc
Confidence 754444555667765 778883
No 284
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.91 E-value=0.15 Score=42.84 Aligned_cols=88 Identities=20% Similarity=0.356 Sum_probs=56.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~ 274 (353)
.+|-++|.|.+|..+++-+...|+ +|++.+++.++.+.+.+.|+... .+..+.+.. .|+||-|+...
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHHH-----BSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHhhc-----ccceEeecccc
Confidence 468889999999999999999999 99999999999999888774432 122333332 57777777765
Q ss_pred HHHHHHHH------HhccCCceEEEEcC
Q 018627 275 GMITTALQ------SCCDGWGLAVTLGV 296 (353)
Q Consensus 275 ~~~~~~~~------~l~~~~G~~v~~g~ 296 (353)
...+..+. .+.++ ..+++++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence 44444333 23443 45555544
No 285
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.14 Score=45.45 Aligned_cols=103 Identities=16% Similarity=0.210 Sum_probs=60.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHH----HHHhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~----~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
+++++||+|+ |++|..+++.+...|+ +++.+.++. +..+ .+++.+... .+ |..+ ..++.+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5689999997 9999999999999999 676665543 2222 223334321 22 2221 223333333221 2
Q ss_pred CCccEEEeccCChH-------------------------HHHHHHHHhccCCceEEEEcCCC
Q 018627 262 GGADYSFECIGDTG-------------------------MITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 262 ~~~dvv~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
+++|++|.++|... .+..+++.+... |+++.++...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 142 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTSV 142 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeecc
Confidence 47999999987410 122334455665 8999887643
No 286
>PRK14967 putative methyltransferase; Provisional
Probab=95.89 E-value=0.13 Score=45.58 Aligned_cols=99 Identities=17% Similarity=0.152 Sum_probs=64.2
Q ss_pred hccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcCC
Q 018627 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGG 263 (353)
Q Consensus 188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
...+.++++||-.|+|. |..+..+++. +..+|++++.+++.++.+++ .+....+.. .++.+.+ ..+.
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~----~d~~~~~---~~~~ 101 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR----GDWARAV---EFRP 101 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE----Cchhhhc---cCCC
Confidence 34577889999999875 7777777765 55599999999988776543 343222211 2222211 2348
Q ss_pred ccEEEeccCC---------------------------hHHHHHHHHHhccCCceEEEEcC
Q 018627 264 ADYSFECIGD---------------------------TGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 264 ~dvv~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
||+|+.+.+- ...+..+.+.|+++ |+++.+-.
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~~ 160 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQS 160 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 9999975320 11345677899997 99997643
No 287
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.89 E-value=0.072 Score=47.53 Aligned_cols=36 Identities=25% Similarity=0.438 Sum_probs=31.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
...+|+|+|.|++|..++..+...|..+++.+|.+.
T Consensus 10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 347899999999999999999999999999997654
No 288
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.05 Score=49.10 Aligned_cols=78 Identities=22% Similarity=0.338 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHhc--CC
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD--GG 263 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~~--~~ 263 (353)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... ++ |..+ ...+...+.+... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 357999998 9999999999999999 899998887665433 2334322 11 2221 2233333333221 36
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.++|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 289
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.89 E-value=0.052 Score=49.59 Aligned_cols=80 Identities=23% Similarity=0.339 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh----HHHHHhCC-Cce-EeCCCCCCccHHHHHHHHhc--C
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK----CEKAKAFG-VTE-FLNPNDNNEPVQQVIKRITD--G 262 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~----~~~~~~~G-~~~-~~~~~~~~~~~~~~~~~~~~--~ 262 (353)
-.|+.|||+|+ +++|.+.++=...+|+ +++..|.+++. .+..++.| +.. ..|..+ .++.....++.-. |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 36899999987 7899988888888899 88888777653 34445555 222 233332 3444443333322 3
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|++++++|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 88999999884
No 290
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.89 E-value=0.067 Score=41.27 Aligned_cols=94 Identities=19% Similarity=0.257 Sum_probs=60.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
.|++|||+|+|.+|..-++.+...|+ +|+++.... +..+ +-..... ..+.+. -.++++||-+.+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~~-----l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEED-----LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GGG-----CTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHHH-----HhhheEEEecCC
Confidence 57899999999999999999999999 898886664 2122 2122221 112101 126999999988
Q ss_pred ChHHHHHHHHHhccCCceEEEEcCCCCCCce
Q 018627 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303 (353)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 303 (353)
.+..-+...+..+.. |.++.+...+...++
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF 99 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELCDF 99 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCCSE
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCCeE
Confidence 866555556667765 999998776554443
No 291
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.052 Score=49.44 Aligned_cols=77 Identities=26% Similarity=0.342 Sum_probs=51.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCc-eE--eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EF--LNPNDNNEPVQQVIKRIT--DGGADYS 267 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~-~~--~~~~~~~~~~~~~~~~~~--~~~~dvv 267 (353)
+++||+|+ |.+|..+++.+...|. +|+++.+++++.+.+++ .+.. .+ .|..+ ...+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999997 9999999999888999 89999899887776644 2221 11 22221 222333333321 2378999
Q ss_pred EeccCC
Q 018627 268 FECIGD 273 (353)
Q Consensus 268 ~d~~g~ 273 (353)
|.++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
No 292
>PRK05717 oxidoreductase; Validated
Probab=95.85 E-value=0.051 Score=48.87 Aligned_cols=79 Identities=23% Similarity=0.322 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-E--eCCCCCCccHHHHHHHHhc--CCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~~~~--~~~d 265 (353)
.|+++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++... . .|..+ ..++.+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999997 8999999999998999 888888877655443 3444321 1 23321 2223233333222 3689
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99999874
No 293
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.058 Score=50.39 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----h-CC-Cc-eE--eCCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----A-FG-VT-EF--LNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~-~G-~~-~~--~~~~~~~~~~~~~~~~~~-- 260 (353)
.|++++|+|+ +++|.+++..+...|+ +|+.+.+++++.+.+. + .+ .. .+ .|..+ ..+..+.+.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4789999998 8999999999989999 8988889887655332 1 11 11 11 23321 222222222221
Q ss_pred cCCccEEEeccCC
Q 018627 261 DGGADYSFECIGD 273 (353)
Q Consensus 261 ~~~~dvv~d~~g~ 273 (353)
.+.+|++|+++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2379999998874
No 294
>PRK09242 tropinone reductase; Provisional
Probab=95.83 E-value=0.051 Score=48.88 Aligned_cols=79 Identities=19% Similarity=0.256 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----C--CCce-E--eCCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~--G~~~-~--~~~~~~~~~~~~~~~~~~-- 260 (353)
.++++||+|+ |++|..++..+...|+ +|++++++.++.+.+.+ . +... . .|..+ ..++...+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4789999998 8999999999999999 89999888877654422 1 2221 1 23321 223333333321
Q ss_pred cCCccEEEeccCC
Q 018627 261 DGGADYSFECIGD 273 (353)
Q Consensus 261 ~~~~dvv~d~~g~ 273 (353)
-+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999984
No 295
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.82 E-value=0.071 Score=48.16 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=49.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCCeEEEEcCChhhH---HHH-HhCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKC---EKA-KAFGVTEFL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Gag---~vG~~a~~la~~~g~~~vi~~~~~~~~~---~~~-~~~G~~~~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
.|+++||+|++ ++|.++++.+...|+ +|+.++++++.. +.+ ++++....+ |.. +..+..+.+.... .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVR-EPGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcC-CHHHHHHHHHHHHHHc
Confidence 57899999873 799999999999999 888887875432 222 334432222 222 1223333333322 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+.+|++++++|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 479999999873
No 296
>PLN02366 spermidine synthase
Probab=95.82 E-value=0.075 Score=49.54 Aligned_cols=101 Identities=17% Similarity=0.167 Sum_probs=64.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CC------ceEeCCCCCCccHHHHHHHHhcCC
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GV------TEFLNPNDNNEPVQQVIKRITDGG 263 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~------~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
....++||++|+|. |..+..+++.-+..+|++++.+++-.+.++++ .. +.-+... ..+..+.+++..++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi--~~Da~~~l~~~~~~~ 165 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH--IGDGVEFLKNAPEGT 165 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE--EChHHHHHhhccCCC
Confidence 35578999998754 55666777776666899999999888888773 21 1000000 123333444333448
Q ss_pred ccEEEeccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627 264 ADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 264 ~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g 295 (353)
||+||--... .+.++.+.+.|+++ |.++.-.
T Consensus 166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 9988864332 24577888999997 9997643
No 297
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.80 E-value=0.056 Score=48.69 Aligned_cols=79 Identities=23% Similarity=0.414 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E--eCCCCCCccHHHHHHHHhc--C
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~--~~~~~~~~~~~~~~~~~~~--~ 262 (353)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ...+.+.+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5789999997 9999999999999999 8999989887765443 223221 2 23321 2233332332221 3
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 298
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.057 Score=48.54 Aligned_cols=79 Identities=16% Similarity=0.268 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh-hHH----HHHhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~-~~~----~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
.++++||+|+ +++|.++++.+...|+ +|++++++++ ..+ .+++.+... .+ |..+ ..++.+.+.+.. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4789999987 8999999999999999 8888877643 222 233334322 22 2221 223333333321 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+.+|+++.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 478999999884
No 299
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.78 E-value=0.068 Score=47.94 Aligned_cols=79 Identities=28% Similarity=0.371 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ +..+... .+ |..+ ..++.+.+.... .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 5788999998 8999999999999999 899998887765433 2223222 22 2221 223333333221 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 300
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.77 E-value=0.09 Score=45.91 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~ 227 (353)
...+|+|+|+|++|..+++.+...|.++++.+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 56789999999999999999999999999999877
No 301
>PRK08589 short chain dehydrogenase; Validated
Probab=95.77 E-value=0.051 Score=49.51 Aligned_cols=79 Identities=23% Similarity=0.301 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH---hCCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~---~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.++++||+|+ +++|.++++.+...|+ +|++++++++..+.++ +.+... . .|..+ ..+....+.... .+.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 8999999999988999 8998888843322232 233221 1 23321 223333333322 247
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++++++|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999999874
No 302
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.051 Score=48.53 Aligned_cols=79 Identities=22% Similarity=0.292 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C--CCc-eEe--CCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--G~~-~~~--~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.++++||+|+ |.+|..+++.+...|+ +|+++.++.++.+...+ + +.. ..+ |.. +.....+.+.+.. .++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVG-SAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCC-CHHHHHHHHHHHHHHcCC
Confidence 4679999998 8999999998888898 89999888776544322 2 322 122 222 1223333333221 137
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 303
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.75 E-value=0.064 Score=48.29 Aligned_cols=79 Identities=20% Similarity=0.303 Sum_probs=50.4
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--E--eCCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Gag---~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~--~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.|+++||+|++ ++|.++++.+...|+ +|+.+.++++..+.++++.... . .|..+ ..+..+.+.... -+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 57899999874 899999999999999 8888888754444444432211 1 22221 223333333322 247
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++++++|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998873
No 304
>PLN02253 xanthoxin dehydrogenase
Probab=95.75 E-value=0.051 Score=49.61 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--c-eE--eCCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EF--LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~-~~--~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++. . .. .|..+ ...+.+.+.... -++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 4789999987 8999999998888999 899888877655433 33321 1 11 23321 223333333221 147
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++++++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 305
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.1 Score=47.06 Aligned_cols=77 Identities=23% Similarity=0.317 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCc-eEe--CCCCCCccHHHHHHHHhcCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVT-EFL--NPNDNNEPVQQVIKRITDGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~-~~~--~~~~~~~~~~~~~~~~~~~~ 263 (353)
.++++||+|+ +++|..+++.+...|+ +|+++++++++.+.+.+ .+.. ..+ |..+ ..++.+.+.. -+.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~--~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAE--AGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHH--hCC
Confidence 4789999998 8999999999999999 99999888876654322 2322 122 2221 2222222222 147
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.+.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 306
>PRK08643 acetoin reductase; Validated
Probab=95.74 E-value=0.056 Score=48.53 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ...+.+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999998 8999999999999999 8999988877654432 223222 1 13221 222333333321 247
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|+++.++|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 307
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.74 E-value=0.042 Score=50.41 Aligned_cols=45 Identities=31% Similarity=0.426 Sum_probs=40.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 236 (353)
..|+++||+|+|+.+.+++.-+...|+++|+++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 358999999999999999999999998899999999999777754
No 308
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.73 E-value=0.076 Score=48.77 Aligned_cols=79 Identities=20% Similarity=0.271 Sum_probs=57.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-----hCCCce---EeCCCCCCccHHHHHHHHhcC-
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-----AFGVTE---FLNPNDNNEPVQQVIKRITDG- 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-----~~G~~~---~~~~~~~~~~~~~~~~~~~~~- 262 (353)
-|++.+|+|+ .++|.+-+.=+...|. +|+.+.|+++|++..+ +.++.- ++|+.+.+. ..+.+++...+
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLAGL 125 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhcCC
Confidence 4788999998 7899876665555899 8999999999988663 345322 356654333 45667766666
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+-+.++|+|-
T Consensus 126 ~VgILVNNvG~ 136 (312)
T KOG1014|consen 126 DVGILVNNVGM 136 (312)
T ss_pred ceEEEEecccc
Confidence 88899999985
No 309
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.72 E-value=0.11 Score=46.55 Aligned_cols=103 Identities=18% Similarity=0.196 Sum_probs=67.1
Q ss_pred hccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh--
Q 018627 188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~-- 260 (353)
..+..+.++||-+|.| .|..++.+++.++ ..+|+.++.+++..+.+++ .|...-+... ..+..+.+.++.
T Consensus 63 l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~~ 139 (234)
T PLN02781 63 LVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLNN 139 (234)
T ss_pred HHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHhC
Confidence 4566778899998864 5676777777653 3499999999988877744 4644322111 233444444442
Q ss_pred --cCCccEEEeccCC---hHHHHHHHHHhccCCceEEEE
Q 018627 261 --DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 261 --~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (353)
.+.||+||--... ...++.+++.++++ |.++.-
T Consensus 140 ~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 140 DPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 2489988865432 34577788999997 887753
No 310
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.053 Score=48.77 Aligned_cols=80 Identities=24% Similarity=0.333 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH----HHHhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.+++++|+|+ |++|..+++.+...|++.|++++++.++.+ .+++.+.... .|..+ ...+.+.+.... -+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5788999998 899999999999999944999988876554 2333443321 23321 222333332221 13
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 311
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.061 Score=48.18 Aligned_cols=79 Identities=18% Similarity=0.294 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+... .+ +..+ ..+..+.+.+.. -+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999997 8999999999999999 89999888776554422 33221 22 2221 223333333322 13
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 312
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.05 Score=48.82 Aligned_cols=77 Identities=18% Similarity=0.253 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~--~~~~dvv~ 268 (353)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++. .....+.. ..|..+ ..++.+.+.... -+.+|++|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 80 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDVLV 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999998 8999999999999999 899998877651 11111111 123221 223333333321 23789999
Q ss_pred eccCC
Q 018627 269 ECIGD 273 (353)
Q Consensus 269 d~~g~ 273 (353)
.++|.
T Consensus 81 ~~ag~ 85 (252)
T PRK07856 81 NNAGG 85 (252)
T ss_pred ECCCC
Confidence 99873
No 313
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.69 E-value=0.067 Score=48.09 Aligned_cols=79 Identities=20% Similarity=0.301 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--hHHHHHhCCCce-E--eCCCCCCccHHHHHHHHh--cCCc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA 264 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~ 264 (353)
.|+++||+|+ |++|.++++.+...|+ +|+.+++++. ..+.+++.+... . .|.. +..+..+.+.+.. .+.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLR-KIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhCCC
Confidence 4789999998 8999999999999999 8888765432 223344444322 1 2222 1223333333321 2379
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|++++++|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 314
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.68 E-value=0.13 Score=45.90 Aligned_cols=74 Identities=27% Similarity=0.325 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCccE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGADY 266 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~dv 266 (353)
.++++||+|+ |.+|..++..+...|+ +|++++++. .+..+... .+ |..+ ...+.+.+.+.. .+++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999998 8899999999988999 888887775 22222211 11 2221 223333333322 236899
Q ss_pred EEeccCC
Q 018627 267 SFECIGD 273 (353)
Q Consensus 267 v~d~~g~ 273 (353)
++.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999874
No 315
>PRK06720 hypothetical protein; Provisional
Probab=95.67 E-value=0.083 Score=44.74 Aligned_cols=80 Identities=21% Similarity=0.248 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-EeCCCC-CCccHHHHHHHH--hcCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FLNPND-NNEPVQQVIKRI--TDGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~~~~~-~~~~~~~~~~~~--~~~~ 263 (353)
.++.++|+|+ +++|..++..+...|+ +|++++++++..+.. ++.+... .+..+- +..++.+.+.+. .-++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5788999997 7899999998888898 899998887655332 2334332 222211 112233322221 1247
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++++++|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 316
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.15 Score=46.51 Aligned_cols=77 Identities=22% Similarity=0.316 Sum_probs=48.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh-cCCcc
Q 018627 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT-DGGAD 265 (353)
Q Consensus 194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~-~~~~d 265 (353)
++.+||+|+|++|.+++..+. .|+ +|+.+++++++.+.+ ++.|... . .|..+ ..++.+.+.... .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 357888898899999998885 798 899998887765433 2234322 2 23321 233333333221 24799
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
++++++|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999984
No 317
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.071 Score=48.50 Aligned_cols=78 Identities=27% Similarity=0.412 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCC--Cc-eEe--CCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFG--VT-EFL--NPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G--~~-~~~--~~~~~~~~~~~~~~~~~-- 260 (353)
.++++||+|+ |.+|..+++.+...|+ +|+++.+++++.+... +.+ .. .++ |..+ ..++...+.+..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4689999998 8999999999999999 8999988876654332 221 11 122 3221 223333333322
Q ss_pred cCCccEEEeccC
Q 018627 261 DGGADYSFECIG 272 (353)
Q Consensus 261 ~~~~dvv~d~~g 272 (353)
.+++|++|.++|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 237899999987
No 318
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.65 E-value=0.046 Score=47.47 Aligned_cols=98 Identities=16% Similarity=0.234 Sum_probs=59.8
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
+.....++.+||-.|+| .|..+..+++. |. +|++++.+++-++.+++ .+...+. .. ..++.+. . .++
T Consensus 24 ~~l~~~~~~~vLDiGcG-~G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~-~~--~~d~~~~--~-~~~ 94 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCG-NGRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH-TA--VVDLNNL--T-FDG 94 (197)
T ss_pred HhcccCCCCcEEEECCC-CCHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce-EE--ecChhhC--C-cCC
Confidence 34455677899999886 36667777764 77 99999999987666543 2322111 10 1111110 1 134
Q ss_pred CccEEEeccCC--------hHHHHHHHHHhccCCceEEEE
Q 018627 263 GADYSFECIGD--------TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 263 ~~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~ 294 (353)
.||+|+.+..- ...+....+.|+++ |.++.+
T Consensus 95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~ 133 (197)
T PRK11207 95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV 133 (197)
T ss_pred CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 79999975431 24466677789997 996544
No 319
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.65 E-value=0.06 Score=53.33 Aligned_cols=77 Identities=23% Similarity=0.375 Sum_probs=54.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh---------------------hhHHHHHhCCCceEeCCCCCCcc
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP---------------------EKCEKAKAFGVTEFLNPNDNNEP 251 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~---------------------~~~~~~~~~G~~~~~~~~~~~~~ 251 (353)
.+++|+|+|+|+.|+.++..++..|. .|++.+..+ ...+.++++|++..++... ..+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence 68899999999999999999999999 788887653 2456778899876655431 111
Q ss_pred HHHHHHHHhcCCccEEEeccCCh
Q 018627 252 VQQVIKRITDGGADYSFECIGDT 274 (353)
Q Consensus 252 ~~~~~~~~~~~~~dvv~d~~g~~ 274 (353)
+ .+.... ..+|.||.++|..
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCC
Confidence 1 111111 2699999999974
No 320
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.65 E-value=0.072 Score=47.89 Aligned_cols=79 Identities=22% Similarity=0.386 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ ++... .+ |.. +.....+.+.+.. .+.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVT-RQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCC-CHHHHHHHHHHHHHHcCCCC
Confidence 4678999998 8999999999999999 89999998887665533 33211 12 222 1223333333321 23789
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 321
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.65 E-value=0.066 Score=50.12 Aligned_cols=78 Identities=24% Similarity=0.319 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC---c-eE--eCCCCCCccHHHHHHHH--hcC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRI--TDG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~---~-~~--~~~~~~~~~~~~~~~~~--~~~ 262 (353)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +++.. . .. .|..+ .....+.+.+. ..+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 5788999998 8999999999988998 899998888776544 22321 1 11 23321 22222223222 123
Q ss_pred CccEEEeccC
Q 018627 263 GADYSFECIG 272 (353)
Q Consensus 263 ~~dvv~d~~g 272 (353)
++|++|+++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
No 322
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.076 Score=47.38 Aligned_cols=77 Identities=23% Similarity=0.342 Sum_probs=50.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----C--CCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~--G~~~-~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ . +..- ++ |..+ ...+.+.+.+.. -
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 568999998 8999999998888898 89888888877654422 1 2111 22 3321 223333333322 2
Q ss_pred CCccEEEeccC
Q 018627 262 GGADYSFECIG 272 (353)
Q Consensus 262 ~~~dvv~d~~g 272 (353)
+++|++|.++|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999987
No 323
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.068 Score=48.18 Aligned_cols=79 Identities=28% Similarity=0.325 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh---CCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
.++++||+|+ |++|..++..+...|+ +|+.++++++..+..++ .+... . .|..+ ..++...+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999997 8999999999999999 89999888754433322 23221 1 22221 222333333221 237
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998883
No 324
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.61 E-value=0.077 Score=47.84 Aligned_cols=76 Identities=26% Similarity=0.388 Sum_probs=49.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEe--CCCCCCccHHHHHHHHh--cCCccE
Q 018627 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (353)
Q Consensus 196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~dv 266 (353)
++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++.+....+ |..+ .+++.+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899997 8999999999999999 899998988765543 222322222 2221 233333333322 247999
Q ss_pred EEeccCC
Q 018627 267 SFECIGD 273 (353)
Q Consensus 267 v~d~~g~ 273 (353)
++++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9999874
No 325
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.61 E-value=0.076 Score=47.65 Aligned_cols=79 Identities=25% Similarity=0.386 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ ++.+... .+ |..+ ..++...+.... -+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5889999998 8999999998888999 899999987765443 2334222 22 3321 223333333322 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.++|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998884
No 326
>PRK00811 spermidine synthase; Provisional
Probab=95.60 E-value=0.08 Score=48.81 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-C-----C--ceEeCCCCCCccHHHHHHHHhcCC
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-G-----V--TEFLNPNDNNEPVQQVIKRITDGG 263 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G-----~--~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
...++||++|+|. |..+..+++..+.++|++++.+++-.+.++++ . . +.-+... ..+..+.++. ..+.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~--~~Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV--IGDGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE--ECchHHHHhh-CCCc
Confidence 4568999998753 66666777776777999999999998888763 1 1 1101000 1223333433 3458
Q ss_pred ccEEEeccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627 264 ADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 264 ~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g 295 (353)
+|+|+-.... .+.++...+.|+++ |.++.-.
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 9988864321 23456777899997 9988753
No 327
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.60 E-value=0.086 Score=48.75 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
..++++||+|+|+.|.+++..+...|+++|+++.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999999988899997799998885
No 328
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.084 Score=47.39 Aligned_cols=78 Identities=18% Similarity=0.302 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC---Cce-EeCCCCCCccHHHHHHHHh--cCCcc
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG---VTE-FLNPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G---~~~-~~~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+ +. +.. ..|..+ ...+...+.+.. .+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 468999998 8999999998888898 89999888877654432 21 111 122221 222222333221 13699
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 329
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.28 Score=43.91 Aligned_cols=104 Identities=18% Similarity=0.192 Sum_probs=60.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHH----HhCCCce-E--eCCCCCCccHH---HHHHHH-
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQ---QVIKRI- 259 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~---~~~~~~- 259 (353)
.++++||+|+ +++|.++++.+...|+ +|++.. +++++.+.+ ++.+... . .|..+ ..+.. +.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES-LHGVEALYSSLDNEL 80 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC-HHHHHHHHHHHHHHh
Confidence 4789999997 8999999999999999 777653 444443322 2223221 1 12221 11222 222221
Q ss_pred ---hc-CCccEEEeccCCh----------H---------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627 260 ---TD-GGADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 260 ---~~-~~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
.+ +++|++++++|.. + ..+.++..+.+. |++|.+++...
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~~ 148 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAAT 148 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCccc
Confidence 12 2799999998731 0 112344556675 99999987544
No 330
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.58 E-value=0.085 Score=49.17 Aligned_cols=96 Identities=10% Similarity=0.047 Sum_probs=66.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHH-hCCCc--eEeCCCCCCccHHHHHHHHhcCCccE
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAK-AFGVT--EFLNPNDNNEPVQQVIKRITDGGADY 266 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~-~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~dv 266 (353)
.....+++|+|+|..|.+.+..+.. .+.++|.+.+++.++.+.+. ++... .+. . .++.+.++ ..|+
T Consensus 122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av~-----~aDi 191 (304)
T PRK07340 122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIPE-----AVDL 191 (304)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHhh-----cCCE
Confidence 3466889999999999998888864 67778999999998876553 33211 111 1 22333333 5999
Q ss_pred EEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 267 SFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 267 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
|+.|++++..+-..+ ++++ -++..+|....
T Consensus 192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p 221 (304)
T PRK07340 192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFTP 221 (304)
T ss_pred EEEccCCCCceeCcc--CCCC-CEEEecCCCCC
Confidence 999998765544443 7886 88999997655
No 331
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.58 E-value=0.22 Score=41.55 Aligned_cols=90 Identities=19% Similarity=0.251 Sum_probs=56.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
.|.+|||+|+|.+|..-++.+...|+ .|++++ ++..+.+++++..... .. .+. +..-.++|+||-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~-~~----~~~----~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWK-QK----TFS----NDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEE-ec----ccC----hhcCCCceEEEECCC
Confidence 67899999999999999988888899 888773 4444444555432221 11 111 000126899999988
Q ss_pred ChHHHHHHHHHhccCCceEEEEcC
Q 018627 273 DTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
..+ .+..+....+. +.++..-.
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~~d 101 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNVVS 101 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEECC
Confidence 744 55665555554 44555433
No 332
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.079 Score=49.16 Aligned_cols=79 Identities=22% Similarity=0.268 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----Hh-C-CCc-eE--eCCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KA-F-GVT-EF--LNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~-~-G~~-~~--~~~~~~~~~~~~~~~~~~-- 260 (353)
.+++|||+|+ |++|..+++.+...|+ +|+++.++.++.+.+ .+ . +.. .. .|..+ ..+..+.+.+..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5789999998 8999999998888899 888888887765432 11 1 111 12 23321 223333333322
Q ss_pred cCCccEEEeccCC
Q 018627 261 DGGADYSFECIGD 273 (353)
Q Consensus 261 ~~~~dvv~d~~g~ 273 (353)
-+++|++|.++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 2379999999873
No 333
>PRK07574 formate dehydrogenase; Provisional
Probab=95.57 E-value=0.13 Score=49.47 Aligned_cols=45 Identities=29% Similarity=0.382 Sum_probs=36.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G 238 (353)
.|++|.|+|.|.+|+.+++.++..|. +|++.++.....+..+.+|
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 57899999999999999999999999 9999988753333333444
No 334
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.096 Score=48.18 Aligned_cols=80 Identities=23% Similarity=0.254 Sum_probs=49.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh---------hhHHH----HHhCCCce-E--eCCCCCCccHHH
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCEK----AKAFGVTE-F--LNPNDNNEPVQQ 254 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~---------~~~~~----~~~~G~~~-~--~~~~~~~~~~~~ 254 (353)
-.++++||+|+ +++|.++++.+...|+ +|++++++. ++.+. +++.|... . .|..+ ..+..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 46789999987 8999999999988999 788776654 33322 22334322 1 12221 223333
Q ss_pred HHHHHh--cCCccEEEeccCC
Q 018627 255 VIKRIT--DGGADYSFECIGD 273 (353)
Q Consensus 255 ~~~~~~--~~~~dvv~d~~g~ 273 (353)
.+.... -+.+|++++++|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 333322 2479999999874
No 335
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.56 E-value=0.23 Score=44.25 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=60.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhH----HHHHhCCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKC----EKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~----~~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~ 261 (353)
.++++||+|+ |.+|..++.-+...|+ +++.+.+ +.++. ..+++.+... . .|..+ ..++...+.... -
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRY 82 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHc
Confidence 3678999998 8899999998888999 6665543 32322 2233444332 1 23321 222322333221 1
Q ss_pred CCccEEEeccCCh----------H---------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627 262 GGADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 262 ~~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+.+|++|.+.|.. . ..+.+.+.++.. |+++.+++...
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~ 144 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVAG 144 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchhc
Confidence 3789999999730 0 122334455675 89999987543
No 336
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.55 E-value=0.068 Score=55.10 Aligned_cols=75 Identities=24% Similarity=0.346 Sum_probs=55.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh---------------------hHHHHHhCCCceEeCCCC-CCc
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPND-NNE 250 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~G~~~~~~~~~-~~~ 250 (353)
.+++|+|+|+|+.|+.++..++..|+ .|++.++.+. ..+.++++|++..++... .+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876653 456778889876665432 111
Q ss_pred cHHHHHHHHhcCCccEEEeccCC
Q 018627 251 PVQQVIKRITDGGADYSFECIGD 273 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~ 273 (353)
.+.+ +. ..+|.||.++|.
T Consensus 388 ~~~~-l~----~~~DaV~latGa 405 (639)
T PRK12809 388 TFSD-LT----SEYDAVFIGVGT 405 (639)
T ss_pred CHHH-HH----hcCCEEEEeCCC
Confidence 2221 11 269999999986
No 337
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.089 Score=47.33 Aligned_cols=75 Identities=19% Similarity=0.317 Sum_probs=46.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
.++++||+|+ |++|.++++.+...|+ +|+++++++ +..+... .+....+..+ -.+. +.+.+.. +.+|++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D--~~~~-~~~~~~~-~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWE--CGKE-ESLDKQL-ASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEee--CCCH-HHHHHhc-CCCCEEEEC
Confidence 4689999998 8999999999999999 888887776 2222211 1111222111 1111 1222222 369999999
Q ss_pred cCC
Q 018627 271 IGD 273 (353)
Q Consensus 271 ~g~ 273 (353)
+|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 874
No 338
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.55 E-value=0.15 Score=45.92 Aligned_cols=100 Identities=12% Similarity=0.126 Sum_probs=59.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC--CCceE-eCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF--GVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~--G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
.+++|||+|+ |.+|..++..+...|. +|++..++.++....... ++..+ .|.. +. .+.+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~--d~--~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVT--EG--SDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCC--CC--HHHHHHHhhcCCCEEE
Confidence 4689999998 8999999998888898 898888887765443221 22221 2332 11 1222222222699999
Q ss_pred eccCChH-------------HHHHHHHHhccC-CceEEEEcCC
Q 018627 269 ECIGDTG-------------MITTALQSCCDG-WGLAVTLGVP 297 (353)
Q Consensus 269 d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 297 (353)
.+.|... .....++.+... .+++|.++..
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8876421 122334444432 2688887764
No 339
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.11 Score=46.17 Aligned_cols=76 Identities=17% Similarity=0.241 Sum_probs=48.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce--Ee--CCCCCCccHHHHHHHHhcCCcc
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FL--NPNDNNEPVQQVIKRITDGGAD 265 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~--~~--~~~~~~~~~~~~~~~~~~~~~d 265 (353)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+... ++ |..+ ..+..+.+.+. ...+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~-~~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSL-PALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHH-hhcCC
Confidence 57999997 9999999999999999 89999998877654321 11112 22 2221 22233333322 22579
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
+++.++|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99988764
No 340
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.53 E-value=0.074 Score=47.33 Aligned_cols=79 Identities=20% Similarity=0.236 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH----HHhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
.+++|||+|+ |.+|..++..+...|+ +|++++++.++... +++.+... ++ |..+ ...+.+.+.+.. -+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999997 8999999998888899 89999888655433 23333221 22 2221 222333332222 13
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|++|.+.+.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998864
No 341
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.53 E-value=0.076 Score=48.40 Aligned_cols=78 Identities=32% Similarity=0.382 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ |++|.+++..+...|+ +|+++++++++.+.+ ++.+... . .|..+ ..++...+.... -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4788999997 8999999999999999 899998887665433 2233321 1 22221 222333333222 24
Q ss_pred CccEEEeccC
Q 018627 263 GADYSFECIG 272 (353)
Q Consensus 263 ~~dvv~d~~g 272 (353)
++|++|.++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 342
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.51 E-value=0.18 Score=47.19 Aligned_cols=95 Identities=16% Similarity=0.116 Sum_probs=61.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHH-HCCCCeEEEEcCChhhHHHHHh-C---CCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKA-F---GVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~-~~g~~~vi~~~~~~~~~~~~~~-~---G~~~~~~~~~~~~~~~~~~~~~~~~~~d 265 (353)
....++++|+|+|..|...+..+. ..+.++|.+..++.++.+.+.+ + |.. +... .+..+.++ ..|
T Consensus 122 ~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~~~~av~-----~aD 191 (314)
T PRK06141 122 RKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TDLEAAVR-----QAD 191 (314)
T ss_pred CCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CCHHHHHh-----cCC
Confidence 356789999999999999886444 3677799999999888766533 3 321 1111 12333332 589
Q ss_pred EEEeccCChHH-HHHHHHHhccCCceEEEEcCCC
Q 018627 266 YSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 266 vv~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
+|+.+++.+.. +.. +.++++ -++..+|...
T Consensus 192 IVi~aT~s~~pvl~~--~~l~~g-~~i~~ig~~~ 222 (314)
T PRK06141 192 IISCATLSTEPLVRG--EWLKPG-THLDLVGNFT 222 (314)
T ss_pred EEEEeeCCCCCEecH--HHcCCC-CEEEeeCCCC
Confidence 99988876433 222 567885 6666777543
No 343
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.13 Score=45.02 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=47.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcC--CccEEEe
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFE 269 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~dvv~d 269 (353)
.+++||+|+ |.+|..++..+... . +|++++++.++.+.+.+ .....++..+ -.+ .+.+.+...+ ++|.+|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D--~~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVD--LTD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecC--CCC-HHHHHHHHHhcCCCCEEEE
Confidence 367999998 89999998877776 6 89999998877665543 2112222221 111 1233333222 6999999
Q ss_pred ccCC
Q 018627 270 CIGD 273 (353)
Q Consensus 270 ~~g~ 273 (353)
++|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9874
No 344
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.47 E-value=0.1 Score=46.93 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----h-CCCce--Ee--CCCCCCccHHHHHHHHh--c
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----A-FGVTE--FL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~-~G~~~--~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. + .+... .+ |..+ ..+....+.+.. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 568999998 8999999999999999 8999988876554332 1 22111 22 2221 222333333321 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|+++++.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999999873
No 345
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.46 E-value=0.066 Score=48.98 Aligned_cols=80 Identities=18% Similarity=0.216 Sum_probs=54.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc---e---EeCCCCCCccHH---HHHH
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---E---FLNPNDNNEPVQ---QVIK 257 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~---~---~~~~~~~~~~~~---~~~~ 257 (353)
-.|+.+||+|+ .++|.+.+..+...|+ +|+.+++++++.+..++ .+.. . ..|..+ +++.. +...
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFAV 83 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHHH
Confidence 46889999987 8899999999999999 99999999888665432 2322 1 122221 22222 2222
Q ss_pred HHhcCCccEEEeccCC
Q 018627 258 RITDGGADYSFECIGD 273 (353)
Q Consensus 258 ~~~~~~~dvv~d~~g~ 273 (353)
+...+++|+.+++.|.
T Consensus 84 ~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGA 99 (270)
T ss_pred HHhCCCCCEEEEcCCc
Confidence 3345689999998875
No 346
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.087 Score=49.06 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=30.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~ 227 (353)
.|+++||+|+ +++|.++++.+...|+ +|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 5789999998 8999999999999999 88888776
No 347
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.43 E-value=0.093 Score=47.48 Aligned_cols=78 Identities=18% Similarity=0.307 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChh---hHHHH-HhCCCceE--eCCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~-~~~G~~~~--~~~~~~~~~~~~~~~~~~--~ 261 (353)
.|+.+||+|+ + ++|.++++.+...|+ +|+..+++++ ..+.+ ++.|.... .|..+ ..+..+.+.... .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5788999987 4 799999988888999 8888877642 22222 23353332 23331 233333333332 2
Q ss_pred CCccEEEeccC
Q 018627 262 GGADYSFECIG 272 (353)
Q Consensus 262 ~~~dvv~d~~g 272 (353)
+.+|++++++|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 47999999887
No 348
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.15 Score=45.26 Aligned_cols=78 Identities=15% Similarity=0.187 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHH---hc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRI---TD 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~---~~ 261 (353)
.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+ ++.+... .+ |..+ .+++.+.+.+. .+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999998 7899999999999999 899998988876543 2334332 12 2221 22333233322 22
Q ss_pred CCccEEEeccC
Q 018627 262 GGADYSFECIG 272 (353)
Q Consensus 262 ~~~dvv~d~~g 272 (353)
+.+|++|.+.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 27999999986
No 349
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.42 E-value=0.12 Score=48.81 Aligned_cols=37 Identities=35% Similarity=0.524 Sum_probs=33.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~ 230 (353)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 89999876543
No 350
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.42 E-value=0.099 Score=46.38 Aligned_cols=79 Identities=24% Similarity=0.273 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
+++++||+|+ |.+|..++..+...|+ .|+..+++.++++.+. .++... + .|..+ ...+.+.+.+.. -+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4679999998 8999999999988998 8888888877766543 334221 2 22221 222332222221 13799
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 351
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.42 E-value=0.093 Score=47.23 Aligned_cols=78 Identities=21% Similarity=0.267 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH----HHhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.++++||+|+ +++|.+.++.+...|+ +|+++.++ ++.+. +.+.+... . .|..+ .......+.+.. .+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999998 8999999999999999 88888776 33222 23334321 2 23221 222333333322 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|+++.+.|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 352
>PRK08264 short chain dehydrogenase; Validated
Probab=95.42 E-value=0.073 Score=47.15 Aligned_cols=75 Identities=21% Similarity=0.328 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc-eEe--CCCCCCccHHHHHHHHhcCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFL--NPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~-~~~--~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
.++++||+|+ |.+|..+++.+...|+++|++++++.++.+. .+.. ..+ |..+ ...+.+.+.. -+.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEA--ASDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHh--cCCCCEEE
Confidence 5678999987 9999999999999998678888888776543 2221 122 2221 1222222222 12689999
Q ss_pred eccCC
Q 018627 269 ECIGD 273 (353)
Q Consensus 269 d~~g~ 273 (353)
.++|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 99876
No 353
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.39 E-value=0.22 Score=44.25 Aligned_cols=106 Identities=18% Similarity=0.196 Sum_probs=62.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------hHHHHHh----CCCceEeCCCCCC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------KCEKAKA----FGVTEFLNPNDNN 249 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-------------------~~~~~~~----~G~~~~~~~~~~~ 249 (353)
+.++|+|.|.|++|.+++..+.+.|+.++..+|-+.= |.+.+++ ....--+... .+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~-~~ 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAI-ND 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeeh-Hh
Confidence 4678999999999999999999999999988865441 1111111 1110001111 01
Q ss_pred ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
.-..+.+.++...+||+|+||.-.-..--.++..+.+..-.++..+..++
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 11223444555568999999987633333444434443256777766554
No 354
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.076 Score=46.85 Aligned_cols=74 Identities=19% Similarity=0.255 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHhcC-CccEEEe
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDG-GADYSFE 269 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~-~~dvv~d 269 (353)
.++++||+|+ |++|..+++.+...|. +|+++.++.++ ...... ..|..+ ...+.+.+.+.... ++|+++.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence 3678999998 8999999999999998 89988887654 111111 123321 23333344433333 6899999
Q ss_pred ccCC
Q 018627 270 CIGD 273 (353)
Q Consensus 270 ~~g~ 273 (353)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 355
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.11 Score=47.26 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc---eE--eCCCCCCccHHHHHHHHh--c
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EF--LNPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~---~~--~~~~~~~~~~~~~~~~~~--~ 261 (353)
++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+ .+.. .+ .|..+ ..++.+ +.+.. -
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence 568999998 8999999999988999 89998888776554422 2221 12 23321 233333 43322 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 378999999874
No 356
>PLN03139 formate dehydrogenase; Provisional
Probab=95.36 E-value=0.17 Score=48.62 Aligned_cols=46 Identities=26% Similarity=0.255 Sum_probs=36.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~ 239 (353)
.|++|.|+|.|.+|..+++.++..|. +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 57899999999999999999999999 89999877544444444443
No 357
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.14 Score=45.58 Aligned_cols=75 Identities=13% Similarity=0.163 Sum_probs=48.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC-ceE--eCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TEF--LNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~-~~~--~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
+++||+|+ |++|..++..+...|+ +|+++++++++++.+.+.+. ... .|..+ ..++.+.+.+. ....|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~-~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQL-PFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhc-ccCCCEEEEc
Confidence 57899998 9999999988888999 89999999888777655331 111 23321 23333333332 2246777766
Q ss_pred cC
Q 018627 271 IG 272 (353)
Q Consensus 271 ~g 272 (353)
+|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 65
No 358
>PLN02476 O-methyltransferase
Probab=95.34 E-value=0.19 Score=46.10 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=67.9
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHh-
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRIT- 260 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~- 260 (353)
...+..+.++||=+|.+ +|..++.+|+.++ -.+|+.++.+++..+.+ ++.|..+-+... ..+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li--~GdA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVK--HGLAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHh
Confidence 34566778999999863 5777777787763 22799999999988777 446765423222 234445554432
Q ss_pred ---cCCccEEEeccCC---hHHHHHHHHHhccCCceEEE
Q 018627 261 ---DGGADYSFECIGD---TGMITTALQSCCDGWGLAVT 293 (353)
Q Consensus 261 ---~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~ 293 (353)
.+.||.||--... ...++.++++++++ |.++.
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~ 226 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVM 226 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEE
Confidence 2479988765543 34577888899996 88764
No 359
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.30 E-value=0.16 Score=46.39 Aligned_cols=95 Identities=15% Similarity=0.167 Sum_probs=60.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhC---CCceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTEFLNPNDNNEPVQQVIKRITDGGADY 266 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~---G~~~~~~~~~~~~~~~~~~~~~~~~~~dv 266 (353)
...+++++|+|+|++|.+++..+...|+ +|+++.+++++.+.+ +++ +....... .+ .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-------~~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSM-------DE----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEech-------hh----hcccCccE
Confidence 3457899999999999999998888898 899998988776554 333 22112111 11 11125899
Q ss_pred EEeccCChHH--H---HHHHHHhccCCceEEEEcCCC
Q 018627 267 SFECIGDTGM--I---TTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 267 v~d~~g~~~~--~---~~~~~~l~~~~G~~v~~g~~~ 298 (353)
|++|++.... . ......++++ ..++++...+
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~p 217 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYNP 217 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccCC
Confidence 9999875210 1 0113456775 6777775543
No 360
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.30 E-value=0.1 Score=47.23 Aligned_cols=79 Identities=16% Similarity=0.297 Sum_probs=48.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
.++++||+|+ +++|.+.++.+...|+ +|+.+.++++..+.++ +.|....+ |.. +.++..+.+.... .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVA-SDDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCC-CHHHHHHHHHHHHHHh
Confidence 5789999984 4899999999999999 8887766543333332 23432222 322 1233333333322 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|++++++|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999999874
No 361
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.28 E-value=0.098 Score=46.72 Aligned_cols=78 Identities=23% Similarity=0.349 Sum_probs=50.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+ .+... . .|..+ ..++...+.... .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 357999998 8999999999988999 89999898877655533 23221 1 23321 223333333321 236
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988864
No 362
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.28 E-value=0.58 Score=35.12 Aligned_cols=85 Identities=24% Similarity=0.413 Sum_probs=55.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 196 TVVIFGLGTVGLSVAQGAKARG---ASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g---~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
+|.|+|+|.+|.+++.-+...| . +|+ ++++++++.+.+ +++++.... .+..+.+.+ .|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~-----advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQE-----ADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHHH-----TSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhcc-----CCEEEEE
Confidence 4678899999999999998888 6 777 548999988877 556643221 234445543 8999999
Q ss_pred cCChHHHHHHHHH---hccCCceEEEE
Q 018627 271 IGDTGMITTALQS---CCDGWGLAVTL 294 (353)
Q Consensus 271 ~g~~~~~~~~~~~---l~~~~G~~v~~ 294 (353)
+.. ..+...+.. ..++ ..++.+
T Consensus 69 v~p-~~~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 69 VKP-QQLPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp S-G-GGHHHHHHHHHHHHTT-SEEEEE
T ss_pred ECH-HHHHHHHHHHhhccCC-CEEEEe
Confidence 976 344444443 3443 445544
No 363
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.26 E-value=0.18 Score=46.48 Aligned_cols=77 Identities=17% Similarity=0.259 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCh-HHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 192 SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 192 ~~g~~vLV~Gag~-vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
-.|++|+|+|.|. +|..++.++...|+ +|+.+.+..+ ++.+.+ ..+|+++++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~~aDIvI~A 209 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----KQADIIVGA 209 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----ccCCEEEEc
Confidence 4789999999976 99999999999999 8888854211 111222 258999999
Q ss_pred cCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 271 IGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
+|.+..+.. +.++++ -.++.+|...
T Consensus 210 tG~~~~v~~--~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 210 VGKPELIKK--DWIKQG-AVVVDAGFHP 234 (283)
T ss_pred cCCCCcCCH--HHcCCC-CEEEEEEEee
Confidence 987664443 568886 8888888654
No 364
>PRK01581 speE spermidine synthase; Validated
Probab=95.25 E-value=0.32 Score=46.18 Aligned_cols=100 Identities=14% Similarity=0.072 Sum_probs=65.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC-----------ceEeCCCCCCccHHHHHHHH
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-----------TEFLNPNDNNEPVQQVIKRI 259 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~-----------~~~~~~~~~~~~~~~~~~~~ 259 (353)
....++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++.. ..+-.. ..+..+.++.
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv---i~Da~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH---VCDAKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE---ECcHHHHHHh-
Confidence 3455799999875 56677777777666699999999999999886311 111100 1233344443
Q ss_pred hcCCccEEEeccCC-----------hHHHHHHHHHhccCCceEEEEcC
Q 018627 260 TDGGADYSFECIGD-----------TGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 260 ~~~~~dvv~d~~g~-----------~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
..+.||+||--... .+.+..+.+.|+++ |.++.-..
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 34489988865432 23567778899997 99877643
No 365
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.25 E-value=0.11 Score=46.16 Aligned_cols=80 Identities=21% Similarity=0.332 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-EeCCCC-CCccHHHHHHHHhc--CC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FLNPND-NNEPVQQVIKRITD--GG 263 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~~~~~-~~~~~~~~~~~~~~--~~ 263 (353)
.+.++||+|+ |++|..++..+...|+ +|++++++.++.+.+ +..+... .+..+. +...+.+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999997 8999999998888999 899998887765433 2233221 121111 12233333333221 37
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998874
No 366
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.21 E-value=0.13 Score=45.80 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. +.+... ++ |.. +...+.+.+.... .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDIT-DRDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCC-CHHHHHHHHHHHHHHcC
Confidence 4688999998 8999999999999999 8999988887655442 223222 22 222 1222333333322 23
Q ss_pred CccEEEeccC
Q 018627 263 GADYSFECIG 272 (353)
Q Consensus 263 ~~dvv~d~~g 272 (353)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 7899999987
No 367
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.20 E-value=0.091 Score=45.53 Aligned_cols=98 Identities=13% Similarity=0.172 Sum_probs=58.2
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD 261 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
.+.....++.+||-.|+| .|..+..+++ .|. +|+++|.+++-++.+++ .+.. +... ..++.. . . ..
T Consensus 23 ~~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~--~~d~~~-~-~-~~ 92 (195)
T TIGR00477 23 REAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTD--AYDINA-A-A-LN 92 (195)
T ss_pred HHHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeE--eccchh-c-c-cc
Confidence 344455566789999875 4566666665 477 99999999987766543 2322 1110 011110 0 1 12
Q ss_pred CCccEEEeccC-----C---hHHHHHHHHHhccCCceEEEE
Q 018627 262 GGADYSFECIG-----D---TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 262 ~~~dvv~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~ 294 (353)
+.+|+|+.+.- . ...+....+.|+++ |.++.+
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~ 132 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV 132 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence 47999986422 1 24566777889997 985554
No 368
>PRK12743 oxidoreductase; Provisional
Probab=95.19 E-value=0.12 Score=46.54 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=47.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHH----HHhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~----~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
++++||+|+ +++|..+++.+...|+ +|+.+. ++.++.+. +++.|... . .|..+ ..++...+.+.. -+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 568999998 8999999999999999 776664 44444332 33445432 2 23321 222222222221 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 369
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.18 E-value=0.12 Score=46.39 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.+++|||+|+ +++|..++..+...|+ +++.+++++++.+.+ ++.+... . .|..+ ..+..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999998 8999999999999999 888888877765443 2334322 2 23321 223333333322 24
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999999873
No 370
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.18 E-value=0.13 Score=46.52 Aligned_cols=79 Identities=27% Similarity=0.387 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHhc--C
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~~--~ 262 (353)
.++++||+|+ +++|..++..+...|+ +|+.+++++++.+.+ ++.|... . .|..+ .....+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5789999998 8999999998888999 788888888765433 3334332 1 22221 2223333332211 3
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 371
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.15 E-value=0.1 Score=46.57 Aligned_cols=83 Identities=24% Similarity=0.292 Sum_probs=52.9
Q ss_pred cCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce--E--eCCCC-CCccHHHHHHHH
Q 018627 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--F--LNPND-NNEPVQQVIKRI 259 (353)
Q Consensus 190 ~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~--~--~~~~~-~~~~~~~~~~~~ 259 (353)
+..+++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ ++.+... + .+... ...++.+.....
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3457899999998 8999999999988999 899998887765433 3333221 1 12211 122333333222
Q ss_pred hc--CCccEEEeccCC
Q 018627 260 TD--GGADYSFECIGD 273 (353)
Q Consensus 260 ~~--~~~dvv~d~~g~ 273 (353)
.. +.+|+++.+++.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 21 378999998764
No 372
>PRK08317 hypothetical protein; Provisional
Probab=95.15 E-value=0.11 Score=45.82 Aligned_cols=102 Identities=23% Similarity=0.350 Sum_probs=67.4
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhC--CC-c--eEeCCCCCCccHHHHHHHH
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF--GV-T--EFLNPNDNNEPVQQVIKRI 259 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~--G~-~--~~~~~~~~~~~~~~~~~~~ 259 (353)
.+..++.++++||.+|+|. |..+..+++..+ ..++++++.+++.++.+++. .. . .++..+ ...+ ..
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADGL-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--cccC-----CC
Confidence 3567788999999999864 788888888763 23899999999988877664 11 1 111111 0100 11
Q ss_pred hcCCccEEEecc-----CC-hHHHHHHHHHhccCCceEEEEcC
Q 018627 260 TDGGADYSFECI-----GD-TGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 260 ~~~~~dvv~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
.++.||+|+... .. ...+....+.|+++ |.++....
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 234789887532 12 34678888999997 99987653
No 373
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.11 Score=47.37 Aligned_cols=79 Identities=25% Similarity=0.351 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-------H----HHHHhCCCceE---eCCCCCCccHHHHHH
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------C----EKAKAFGVTEF---LNPNDNNEPVQQVIK 257 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-------~----~~~~~~G~~~~---~~~~~~~~~~~~~~~ 257 (353)
.++++||+|+ |++|..++..+...|+ +|++++++.++ + +.+++.+.... .|..+ ...+.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 5678999998 8999999999989999 88888876542 1 12233443221 23321 223333333
Q ss_pred HHh--cCCccEEEeccCC
Q 018627 258 RIT--DGGADYSFECIGD 273 (353)
Q Consensus 258 ~~~--~~~~dvv~d~~g~ 273 (353)
+.. -+.+|++|+++|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 221 1379999999874
No 374
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.12 E-value=0.098 Score=54.13 Aligned_cols=76 Identities=25% Similarity=0.330 Sum_probs=53.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh---------------------hHHHHHhCCCceEeCCCCC-C
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPNDN-N 249 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~G~~~~~~~~~~-~ 249 (353)
..+++|+|+|+|+.|++++..++.+|+ +|+++++.+. ..+.++++|++...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358999999999999999999999999 7888876543 3456677887654443210 1
Q ss_pred ccHHHHHHHHhcCCccEEEeccCC
Q 018627 250 EPVQQVIKRITDGGADYSFECIGD 273 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~dvv~d~~g~ 273 (353)
..+. .+. ..||.||.++|.
T Consensus 404 i~~~-~~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLE-SLL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHH-HHH----hcCCEEEEeCCC
Confidence 1111 111 269999998885
No 375
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.12 Score=46.97 Aligned_cols=77 Identities=23% Similarity=0.275 Sum_probs=49.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--cCCc
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGA 264 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~ 264 (353)
+++||+|+ |++|..++..+...|+ +|++++++.++.+.+ ++.+.... + |..+ ..++.+.+.... .+++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 36899998 8999999999888999 898888888765533 22333321 2 2221 222233332221 2379
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|++|.++|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999999884
No 376
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.09 E-value=0.16 Score=46.27 Aligned_cols=82 Identities=18% Similarity=0.314 Sum_probs=51.1
Q ss_pred cCCCCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hhHHHH-HhCCCceEe--CCCCCCccHHHHHHHHh
Q 018627 190 DISKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAFGVTEFL--NPNDNNEPVQQVIKRIT 260 (353)
Q Consensus 190 ~~~~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~---~~~~~~-~~~G~~~~~--~~~~~~~~~~~~~~~~~ 260 (353)
++-.++++||+|+ +++|+++++.+...|+ +|+.+.+++ ++++.+ ++++....+ |..+ ..+..+.+.+..
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~ 83 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLE 83 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHH
Confidence 3446789999986 4799999999999999 888876664 333333 344532222 2221 223333333322
Q ss_pred --cCCccEEEeccCC
Q 018627 261 --DGGADYSFECIGD 273 (353)
Q Consensus 261 --~~~~dvv~d~~g~ 273 (353)
.+.+|++++++|.
T Consensus 84 ~~~g~iD~lv~nAG~ 98 (272)
T PRK08159 84 KKWGKLDFVVHAIGF 98 (272)
T ss_pred HhcCCCcEEEECCcc
Confidence 2479999999873
No 377
>PLN02928 oxidoreductase family protein
Probab=95.03 E-value=0.26 Score=46.80 Aligned_cols=35 Identities=26% Similarity=0.535 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
.|+++.|+|.|.+|..+++.++.+|+ +|++.+++.
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~ 192 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW 192 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence 57999999999999999999999999 999998763
No 378
>PLN03075 nicotianamine synthase; Provisional
Probab=95.01 E-value=0.17 Score=46.70 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=64.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhCC-----CceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFG-----VTEFLNPNDNNEPVQQVIKRITDGGADY 266 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~G-----~~~~~~~~~~~~~~~~~~~~~~~~~~dv 266 (353)
+.++|+-+|+|+.++.++.+++.+. -.+++.+|.+++..+.+++.- ...-+... ..+..+... ..+.||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~--~~Da~~~~~--~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFH--TADVMDVTE--SLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEE--ECchhhccc--ccCCcCE
Confidence 7899999999999998888887653 238999999999988886632 11211111 111211110 1247999
Q ss_pred EEecc-------CChHHHHHHHHHhccCCceEEEEc
Q 018627 267 SFECI-------GDTGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 267 v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~g 295 (353)
||-.+ .....++...+.|+++ |.++.=.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 99875 1234567778889996 7776554
No 379
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.99 E-value=0.15 Score=49.19 Aligned_cols=81 Identities=20% Similarity=0.331 Sum_probs=50.6
Q ss_pred cCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH-------HHHhC-CCceE-eCCCCCCccHHHHHHHH
Q 018627 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-------KAKAF-GVTEF-LNPNDNNEPVQQVIKRI 259 (353)
Q Consensus 190 ~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~-------~~~~~-G~~~~-~~~~~~~~~~~~~~~~~ 259 (353)
+...+.+|||+|+ |.+|..+++.+...|. +|+++.++..+.+ ..+.. ++..+ .|..+ ...+.+.++..
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHh
Confidence 4566889999998 9999999999988998 8998888765432 11122 22222 23221 22232223221
Q ss_pred hcCCccEEEeccCC
Q 018627 260 TDGGADYSFECIGD 273 (353)
Q Consensus 260 ~~~~~dvv~d~~g~ 273 (353)
..++|+||+|++.
T Consensus 134 -~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 -GDPVDVVVSCLAS 146 (390)
T ss_pred -CCCCcEEEECCcc
Confidence 1169999998864
No 380
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.99 E-value=0.12 Score=46.72 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=61.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCC------hhhHHHHHhCCCc-eE--eCCCCCCccHHHHHHHHh
Q 018627 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTN------PEKCEKAKAFGVT-EF--LNPNDNNEPVQQVIKRIT 260 (353)
Q Consensus 193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~------~~~~~~~~~~G~~-~~--~~~~~~~~~~~~~~~~~~ 260 (353)
.|+++||+|+ +++|.++++.+...|+ +|+.+.++ ++..+.+++.+.. .. .|..+ .++..+.+....
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 5789999986 4899999999999999 77766432 2233333332221 12 23321 233333333322
Q ss_pred --cCCccEEEeccCCh-------H----------------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627 261 --DGGADYSFECIGDT-------G----------------------MITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 261 --~~~~dvv~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
-+.+|++++++|.. . ..+..+..++++ |+++.+++...
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~~ 151 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLGG 151 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecccc
Confidence 24799999998731 0 112344566675 99998876443
No 381
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.98 E-value=0.19 Score=47.61 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=32.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
.+.+|||+|+|++|..++..+...|.++++.+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998999998864
No 382
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.96 E-value=0.088 Score=47.30 Aligned_cols=36 Identities=33% Similarity=0.473 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
.+.+|+|.|+|++|..+++.+...|.++++.+|.+.
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 347899999999999999999999999999987654
No 383
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.95 E-value=0.16 Score=45.68 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
...+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 457899999999999999999999998998886554
No 384
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.95 E-value=0.49 Score=41.66 Aligned_cols=101 Identities=19% Similarity=0.172 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeC-------CCCCCcc-HHHHHHHHh--
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLN-------PNDNNEP-VQQVIKRIT-- 260 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~-------~~~~~~~-~~~~~~~~~-- 260 (353)
.++.+||+.|+| .|.-++.+|. .|. +|++++.++.-++.+ ++.+...... +....-. +...+.++.
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 577899999986 5777777775 699 999999999888765 3333221000 0000000 000000111
Q ss_pred -cCCccEEEeccCC--------hHHHHHHHHHhccCCceEEEEcC
Q 018627 261 -DGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 261 -~~~~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
.+.||.|+|+..- +..+....++|+|+ |+++.++.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1368999997531 23466777899997 98776654
No 385
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.11 Score=46.63 Aligned_cols=75 Identities=19% Similarity=0.252 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~ 268 (353)
.|+++||+|+ |++|..+++.+...|+ +|+++++++++.. .-....+ .|..+ .....+.+.+.. .+++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999998 8999999999999999 8999988765421 1011111 22221 222222222221 23799999
Q ss_pred eccC
Q 018627 269 ECIG 272 (353)
Q Consensus 269 d~~g 272 (353)
+++|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9987
No 386
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.91 E-value=0.1 Score=46.44 Aligned_cols=79 Identities=20% Similarity=0.282 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhH----HHHHhCCCceE---eCCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKC----EKAKAFGVTEF---LNPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~----~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~--~ 261 (353)
.++.+||+|+ |++|..+++.+...|+ +|++. .++..+. +.+++.+.... .|..+ ..++.+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 3678999997 8999999999999999 66664 3333322 22233454332 23221 222333333221 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 479999999985
No 387
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.89 E-value=0.26 Score=45.24 Aligned_cols=95 Identities=20% Similarity=0.263 Sum_probs=65.2
Q ss_pred hhchhhhHHHHHHHHhccCC-CCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 173 ~l~~~~~ta~~al~~~~~~~-~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
.+||+....+. +.+..++. .|++|+|+|.| .+|.-++.++...|+ +|+.+.+. ..
T Consensus 136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~---------------------t~ 192 (285)
T PRK14191 136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL---------------------TK 192 (285)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC---------------------cH
Confidence 34444333333 33544543 69999999985 899999999999999 88777321 12
Q ss_pred cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
++.+.++ .+|+++-++|.+..+.. ..++++ ..++.+|...
T Consensus 193 ~l~~~~~-----~ADIvV~AvG~p~~i~~--~~vk~G-avVIDvGi~~ 232 (285)
T PRK14191 193 DLSFYTQ-----NADIVCVGVGKPDLIKA--SMVKKG-AVVVDIGINR 232 (285)
T ss_pred HHHHHHH-----hCCEEEEecCCCCcCCH--HHcCCC-cEEEEeeccc
Confidence 2333444 38999999998776554 467886 8999998643
No 388
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.88 E-value=0.16 Score=45.24 Aligned_cols=79 Identities=18% Similarity=0.258 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEE-EcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
+++++||+|+ |.+|..++..+...|+ +|+. ..++.++.+.+ +..+... .+ |.. +..+....+.+.. .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-DVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 4678999998 8999999999999999 6655 46666554332 3334332 22 222 1223333333322 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|++|.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 378999998873
No 389
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.86 E-value=0.23 Score=43.45 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=62.0
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
+..+++++++||-+|+| .|..+..+++.. . +|++++.+++..+.+++ .|...+.... .+..+... ..+
T Consensus 72 ~~l~~~~~~~VLeiG~G-sG~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~--~~~ 143 (212)
T PRK00312 72 ELLELKPGDRVLEIGTG-SGYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRH---GDGWKGWP--AYA 143 (212)
T ss_pred HhcCCCCCCEEEEECCC-ccHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEE---CCcccCCC--cCC
Confidence 55678899999999875 244444555553 3 89999999887665543 4543321111 11111110 124
Q ss_pred CccEEEeccCChHHHHHHHHHhccCCceEEEEc
Q 018627 263 GADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 263 ~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (353)
.||+|+-............+.|+++ |+++..-
T Consensus 144 ~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 144 PFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 7998887655555667778999997 9987653
No 390
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.85 E-value=0.075 Score=50.31 Aligned_cols=77 Identities=14% Similarity=0.201 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--c-eEeCCCCCCccHHHHHHHHhcC-CccE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EFLNPNDNNEPVQQVIKRITDG-GADY 266 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~-~~~~~~~~~~~~~~~~~~~~~~-~~dv 266 (353)
.|++|||+|+ |.+|..+++.+...|. +|+++++++...... +.++. . ..+..+ -.+ .+.+.+...+ ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--l~~-~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGD--IRD-AAKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEcc--CCC-HHHHHHHHhhcCCCE
Confidence 4789999997 8999999999999998 888887766543221 22221 1 111111 111 1233333333 6899
Q ss_pred EEeccCC
Q 018627 267 SFECIGD 273 (353)
Q Consensus 267 v~d~~g~ 273 (353)
||++++.
T Consensus 79 vih~A~~ 85 (349)
T TIGR02622 79 VFHLAAQ 85 (349)
T ss_pred EEECCcc
Confidence 9999873
No 391
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.85 E-value=0.13 Score=53.30 Aligned_cols=113 Identities=25% Similarity=0.324 Sum_probs=66.4
Q ss_pred eeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 018627 148 FSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (353)
Q Consensus 148 ~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~ 226 (353)
..+|.-+++...+.+ +-.+++++=.-..+ ....-.++++||+|+ |++|.++++.+...|+ +|+++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r 446 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL 446 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence 355666666666655 44444444111000 011124789999998 8999999999999999 8999988
Q ss_pred ChhhHHHHHh-----CCCce--E--eCCCCCCccHHHHHHHHh--cCCccEEEeccCC
Q 018627 227 NPEKCEKAKA-----FGVTE--F--LNPNDNNEPVQQVIKRIT--DGGADYSFECIGD 273 (353)
Q Consensus 227 ~~~~~~~~~~-----~G~~~--~--~~~~~~~~~~~~~~~~~~--~~~~dvv~d~~g~ 273 (353)
+.++.+.+.+ .+... . .|..+ ..++.+.+.+.. -+++|++|+++|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 8876654421 23221 1 22221 223333333321 2479999999984
No 392
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=94.84 E-value=0.42 Score=42.11 Aligned_cols=79 Identities=18% Similarity=0.319 Sum_probs=51.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC----ceEe--CCCC-CCccHHHHHHHHh--cCC
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV----TEFL--NPND-NNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~----~~~~--~~~~-~~~~~~~~~~~~~--~~~ 263 (353)
|++++++|+ |++|+....-+...|+ .+.+++-+.|+.+...++-+ ..++ .++- ...++.+..++.. -+.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgi-k~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGI-KVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCc-hheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 899999976 9999999999999999 77777777777666655432 1121 1110 1233333444332 247
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|+.++..|-
T Consensus 84 iDIlINgAGi 93 (261)
T KOG4169|consen 84 IDILINGAGI 93 (261)
T ss_pred eEEEEccccc
Confidence 8999998774
No 393
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.83 E-value=0.17 Score=45.25 Aligned_cols=77 Identities=19% Similarity=0.252 Sum_probs=49.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCc
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA 264 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~ 264 (353)
+++||+|+ |++|..+++.+...|+ +|+.+.+++++.+.+ ++.+... .+ |..+ ...+.+.+.... .+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 46899997 8999999999999999 888888887654433 3334322 11 3221 223333333322 2368
Q ss_pred cEEEeccCC
Q 018627 265 DYSFECIGD 273 (353)
Q Consensus 265 dvv~d~~g~ 273 (353)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999999874
No 394
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.83 E-value=0.21 Score=43.91 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~ 227 (353)
...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999889999877
No 395
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.80 E-value=0.24 Score=45.76 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
.++++||+|+|+.+.+++..+..+|+++++++.|++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 578999999999999888877788998999998984
No 396
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.79 E-value=0.22 Score=45.16 Aligned_cols=78 Identities=18% Similarity=0.331 Sum_probs=48.2
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCCeEEEEcCChh---hHHHHHh-CCCceEe--CCCCCCccHHHHHHHHhc--
Q 018627 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPE---KCEKAKA-FGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (353)
Q Consensus 193 ~g~~vLV~Gag---~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~~~-~G~~~~~--~~~~~~~~~~~~~~~~~~-- 261 (353)
.|+++||+|++ ++|.++++.+...|+ +|+.++++++ ..+.+++ .+....+ |..+ ..++...+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 57899999873 799999999988999 8888877632 2222222 2322222 3321 2333333333322
Q ss_pred CCccEEEeccC
Q 018627 262 GGADYSFECIG 272 (353)
Q Consensus 262 ~~~dvv~d~~g 272 (353)
+.+|++++++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 47999999997
No 397
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.78 E-value=0.093 Score=45.93 Aligned_cols=101 Identities=20% Similarity=0.293 Sum_probs=65.9
Q ss_pred ccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc-
Q 018627 189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD- 261 (353)
Q Consensus 189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~- 261 (353)
.+....++||-+|.+ +|..++.+|+++ +. +|+.++.++++.+.+++ .|...-+... ..+..+.+.++.+
T Consensus 41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~--~gda~~~l~~l~~~ 116 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVI--EGDALEVLPELAND 116 (205)
T ss_dssp HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEE--ES-HHHHHHHHHHT
T ss_pred HHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEE--EeccHhhHHHHHhc
Confidence 344566899999864 688888999887 44 99999999999887744 5654322222 2344555555432
Q ss_pred ---CCccEEEeccCC---hHHHHHHHHHhccCCceEEEE
Q 018627 262 ---GGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 262 ---~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (353)
+.||.||--... ...++.++++++++ |.++.=
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~D 154 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIAD 154 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEc
Confidence 369987754443 23467778899995 766644
No 398
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.75 E-value=0.27 Score=45.49 Aligned_cols=94 Identities=19% Similarity=0.242 Sum_probs=64.6
Q ss_pred hhchhhhHHHHHHHHhccC-CCCCEEEEEc-CChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHHHhCCCceEeCCCCCC
Q 018627 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVD-TNPEKCEKAKAFGVTEFLNPNDNN 249 (353)
Q Consensus 173 ~l~~~~~ta~~al~~~~~~-~~g~~vLV~G-ag~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~~~~G~~~~~~~~~~~ 249 (353)
.+||+....+. +.+..++ -.|++|+|+| .+.+|.-++.++...|+ +|++.. ++.
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 34544333333 2344443 4699999999 48899999999999999 888883 322
Q ss_pred ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
++.+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 194 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 -DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred -CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 1222222 4899999999977666654 8886 8899998653
No 399
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.74 E-value=0.42 Score=39.07 Aligned_cols=82 Identities=20% Similarity=0.229 Sum_probs=59.0
Q ss_pred HhccC-CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627 187 NVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 187 ~~~~~-~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+..++ -.|++|+|+|. ..+|.-++.++...|+ +|+.+.+... ++.+.++ ..
T Consensus 20 ~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------~l~~~v~-----~A 72 (140)
T cd05212 20 NKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------QLQSKVH-----DA 72 (140)
T ss_pred HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------CHHHHHh-----hC
Confidence 43443 36999999997 7799999999999999 8888864321 2233333 38
Q ss_pred cEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
|+|+-++|.+..+.. +.++++ -.++.+|...
T Consensus 73 DIVvsAtg~~~~i~~--~~ikpG-a~Vidvg~~~ 103 (140)
T cd05212 73 DVVVVGSPKPEKVPT--EWIKPG-ATVINCSPTK 103 (140)
T ss_pred CEEEEecCCCCccCH--HHcCCC-CEEEEcCCCc
Confidence 999999998655443 568886 7888777543
No 400
>PRK04266 fibrillarin; Provisional
Probab=94.73 E-value=0.49 Score=42.08 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=60.1
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
+...+++|++||=.|+| .|.....+++..+..+|++++.+++.++.+.+ ......+.-+ ..+. ..... ..+
T Consensus 66 ~~l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D--~~~~-~~~~~-l~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILAD--ARKP-ERYAH-VVE 140 (226)
T ss_pred hhCCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECC--CCCc-chhhh-ccc
Confidence 44688999999999874 24444555665543489999999976664422 2111122111 1110 00011 123
Q ss_pred CccEEEeccCChH----HHHHHHHHhccCCceEEEE
Q 018627 263 GADYSFECIGDTG----MITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 263 ~~dvv~d~~g~~~----~~~~~~~~l~~~~G~~v~~ 294 (353)
.+|+++.....+. .+..+.+.|+++ |+++..
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 6999996554322 356777899997 999884
No 401
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.71 E-value=0.41 Score=43.24 Aligned_cols=97 Identities=19% Similarity=0.191 Sum_probs=66.1
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
.+.....++++||-+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+...+. . +.. .+ ...+.|
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-~-----d~~-~~--~~~~~f 90 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-G-----DVR-DW--KPKPDT 90 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-c-----Chh-hC--CCCCCc
Confidence 3555677889999998853 66666777765 55 899999999998888776543222 1 111 11 112479
Q ss_pred cEEEeccC-----C-hHHHHHHHHHhccCCceEEEE
Q 018627 265 DYSFECIG-----D-TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 265 dvv~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 294 (353)
|+|+.... . ...+....+.|+|+ |+++..
T Consensus 91 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 91 DVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred eEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 99987543 1 34567788889997 998865
No 402
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.70 E-value=0.19 Score=48.73 Aligned_cols=74 Identities=20% Similarity=0.327 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCc-eEe--CCCCCCccHHHHHHHHhcCCccEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT-EFL--NPNDNNEPVQQVIKRITDGGADYS 267 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~-~~~--~~~~~~~~~~~~~~~~~~~~~dvv 267 (353)
.++++||+|+ |++|.+++..+...|+ +|+++++++++.+... +.+.. ..+ |.. + .+.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d---~~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--Q---EAALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--C---HHHHHHHh-CCCCEE
Confidence 4789999998 8999999999888999 8888888876654322 11111 112 222 1 12233322 369999
Q ss_pred EeccCC
Q 018627 268 FECIGD 273 (353)
Q Consensus 268 ~d~~g~ 273 (353)
+.+.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 998774
No 403
>PLN02244 tocopherol O-methyltransferase
Probab=94.68 E-value=0.16 Score=48.13 Aligned_cols=95 Identities=20% Similarity=0.314 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce---EeCCCCCCccHHHHHHHHhcCCc
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~---~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+++++||-+|+| .|..+..+++..|+ +|++++.++...+.+++ .|... ++..+ ..++ ...++.|
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~~-----~~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALNQ-----PFEDGQF 187 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--cccC-----CCCCCCc
Confidence 688999999875 45666777877788 99999999987776644 34321 11111 0000 1123479
Q ss_pred cEEEeccCC------hHHHHHHHHHhccCCceEEEEcC
Q 018627 265 DYSFECIGD------TGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 265 dvv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
|+|+..-.. ...+....+.|+++ |+++.+..
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 999864321 24567788999997 99998754
No 404
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.66 E-value=0.37 Score=44.45 Aligned_cols=69 Identities=25% Similarity=0.346 Sum_probs=50.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChH
Q 018627 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~ 275 (353)
+|.|+|.|.+|..++..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|+..+.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETARQVTE-----QADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHHHHHh-----cCCEEEEecCCHH
Confidence 37788999999999888888898 89999999999988887775321 12222222 4788888887643
Q ss_pred HH
Q 018627 276 MI 277 (353)
Q Consensus 276 ~~ 277 (353)
..
T Consensus 68 ~~ 69 (291)
T TIGR01505 68 QV 69 (291)
T ss_pred HH
Confidence 33
No 405
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.62 Score=41.60 Aligned_cols=79 Identities=15% Similarity=0.271 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEE-EcCChhhHHHH-Hh---CCCce-Ee--CCCCCCccHHHHHHHH---h
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA-KA---FGVTE-FL--NPNDNNEPVQQVIKRI---T 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~-~~~~~~~~~~~-~~---~G~~~-~~--~~~~~~~~~~~~~~~~---~ 260 (353)
.+.+++|+|+ |++|..+++.+...|+ +|++ ..+++++.+.+ .+ .+... ++ |..+ ..++.+.+.+. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 4678999998 8999999999988899 6655 45666554322 22 23221 22 3321 23333333332 1
Q ss_pred ----c-CCccEEEeccCC
Q 018627 261 ----D-GGADYSFECIGD 273 (353)
Q Consensus 261 ----~-~~~dvv~d~~g~ 273 (353)
+ +++|++|.+.|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 368999998874
No 406
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.66 E-value=0.22 Score=44.88 Aligned_cols=78 Identities=23% Similarity=0.289 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHH----H-hCCCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA----K-AFGVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~-~~G~~~-~~--~~~~~~~~~~~~~~~~~-- 260 (353)
.++++||+|+ +++|.+++..+...|+ +|+.+. +++++.+.+ + +.+... .+ |..+ ..++.+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5789999998 8999999999999999 777764 444444322 1 123221 22 3321 223333333322
Q ss_pred cCCccEEEeccC
Q 018627 261 DGGADYSFECIG 272 (353)
Q Consensus 261 ~~~~dvv~d~~g 272 (353)
.+.+|++++++|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247899999885
No 407
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.63 E-value=0.34 Score=44.44 Aligned_cols=93 Identities=16% Similarity=0.275 Sum_probs=65.4
Q ss_pred hchhhhHHHHHHHHhccCC-CCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCcc
Q 018627 174 LSCGLSAGLGAAWNVADIS-KGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251 (353)
Q Consensus 174 l~~~~~ta~~al~~~~~~~-~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 251 (353)
.||+....+..+ +..++. .|++|+|+|-| .+|.-++.++...|+ +|+.+.+. ..+
T Consensus 139 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~---------------------T~~ 195 (285)
T PRK10792 139 RPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRF---------------------TKN 195 (285)
T ss_pred CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECC---------------------CCC
Confidence 454433333333 444543 59999999974 599999999999999 88887432 123
Q ss_pred HHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627 252 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 252 ~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
+.+.++ .+|+++.++|.+..+.. ..++++ ..++.+|..
T Consensus 196 l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 196 LRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred HHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 333444 39999999998776554 678986 889999843
No 408
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.61 E-value=0.18 Score=46.20 Aligned_cols=69 Identities=16% Similarity=0.132 Sum_probs=50.7
Q ss_pred cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
....++++||+|+|+.+.+++..+..+|+++|+++.|+.++.+.+.+ ++.. + .+.+ ....+|+|+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhhc---ccccCCEEE
Confidence 44456799999999999999999999999889999999988776643 3311 1 0111 112589999
Q ss_pred eccC
Q 018627 269 ECIG 272 (353)
Q Consensus 269 d~~g 272 (353)
+|++
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9986
No 409
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.60 E-value=0.22 Score=44.00 Aligned_cols=79 Identities=23% Similarity=0.373 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh-hHH----HHHhCCCce-Ee--CCCCCCccHHHHHHHHhc--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~-~~~----~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~~-- 261 (353)
.++++||+|+ |.+|..++..+...|+ +|+++.++.. +.+ .++..+... .+ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4578999998 8999999999999999 6755545443 222 222233222 22 3321 2223333333222
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|.++.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
No 410
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.59 E-value=0.47 Score=42.86 Aligned_cols=96 Identities=21% Similarity=0.185 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcCCccEE
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGADYS 267 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv 267 (353)
.++.+||-+|+| .|..+..+++. |. +|++++.+++.++.+++ .|...-+... ..+.. .+.....+.||+|
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~--~~d~~-~l~~~~~~~fD~V 116 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFI--HCAAQ-DIAQHLETPVDLI 116 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEE--EcCHH-HHhhhcCCCCCEE
Confidence 456789988875 46667777764 77 99999999998887755 3322111110 11221 2222234589999
Q ss_pred EeccC-----C-hHHHHHHHHHhccCCceEEEE
Q 018627 268 FECIG-----D-TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 268 ~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 294 (353)
+-... . ...+..+.+.|+|+ |+++.+
T Consensus 117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 85421 2 24577888999997 999765
No 411
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.59 E-value=0.26 Score=46.13 Aligned_cols=36 Identities=25% Similarity=0.317 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~ 229 (353)
.|++|.|+|.|.+|..+++.++..|. +|++.++..+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57999999999999999999999999 8999876544
No 412
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=94.59 E-value=0.6 Score=43.10 Aligned_cols=111 Identities=17% Similarity=0.109 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC---Cce--EeCCCCCCccHH---HHHHHHhc
Q 018627 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VTE--FLNPNDNNEPVQ---QVIKRITD 261 (353)
Q Consensus 191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G---~~~--~~~~~~~~~~~~---~~~~~~~~ 261 (353)
..+++-|+|+|+ +++|..++.-+-..|. +|++.--.++..+.++..- --. .+|.. +++.+. +.+++..+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT-~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVT-KPESVKEAAQWVKKHLG 103 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccC-CHHHHHHHHHHHHHhcc
Confidence 445677999999 9999999999999999 8888877777766664421 111 12322 133333 33444445
Q ss_pred C-CccEEEeccCCh--------------------------HHHHHHHHHhccCCceEEEEcCCCCCCce
Q 018627 262 G-GADYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPKLKPEV 303 (353)
Q Consensus 262 ~-~~dvv~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 303 (353)
+ +.-.+++++|.. ......+.++++..||+|.+++..+....
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~ 172 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL 172 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence 5 788899998832 11223334566656999999987775443
No 413
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.59 E-value=0.13 Score=43.30 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=38.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 237 (353)
.|..||++|+ -++|...++-+...|+ +|+++.++++.+..+-+.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e 50 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE 50 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh
Confidence 5788999998 4799999999999999 999999999998877543
No 414
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.55 E-value=0.31 Score=44.73 Aligned_cols=82 Identities=18% Similarity=0.323 Sum_probs=61.0
Q ss_pred HhccCC-CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627 187 NVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 187 ~~~~~~-~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+..++. .|++|+|+|. ..+|.-++.++...|+ +|+.+.+. ..++.+.++ ..
T Consensus 150 ~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~---------------------t~~l~~~~~-----~A 202 (285)
T PRK14189 150 ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK---------------------TRDLAAHTR-----QA 202 (285)
T ss_pred HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC---------------------CCCHHHHhh-----hC
Confidence 444433 6999999998 5579999999999999 88876321 223444444 38
Q ss_pred cEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
|+|+-++|.+..+.. ..++++ ..++.+|...
T Consensus 203 DIVV~avG~~~~i~~--~~ik~g-avVIDVGin~ 233 (285)
T PRK14189 203 DIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMNR 233 (285)
T ss_pred CEEEEcCCCcCccCH--HHcCCC-CEEEEccccc
Confidence 999999998766554 789997 8999999653
No 415
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.55 E-value=0.022 Score=47.02 Aligned_cols=95 Identities=22% Similarity=0.210 Sum_probs=58.1
Q ss_pred EEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC----CCccHHHHHHHHhcCCccEEEeccC
Q 018627 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND----NNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 197 vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
|+|.|+|.+|...+..+...|. .|..+.+++ +.+.+++.|..-.....+ ........ ....+.+|++|-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999999988888998 899998888 777777765432211100 00000000 112347999999986
Q ss_pred ChHHHHHHHHH----hccCCceEEEEcCC
Q 018627 273 DTGMITTALQS----CCDGWGLAVTLGVP 297 (353)
Q Consensus 273 ~~~~~~~~~~~----l~~~~G~~v~~g~~ 297 (353)
... ...+++. +.++ ..++.+.+.
T Consensus 77 a~~-~~~~l~~l~~~~~~~-t~iv~~qNG 103 (151)
T PF02558_consen 77 AYQ-LEQALQSLKPYLDPN-TTIVSLQNG 103 (151)
T ss_dssp GGG-HHHHHHHHCTGEETT-EEEEEESSS
T ss_pred ccc-hHHHHHHHhhccCCC-cEEEEEeCC
Confidence 533 3444444 4443 567777654
No 416
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.52 E-value=0.39 Score=44.41 Aligned_cols=94 Identities=18% Similarity=0.248 Sum_probs=65.4
Q ss_pred hhchhhhHHHHHHHHhccC-CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 173 ~l~~~~~ta~~al~~~~~~-~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
.+||+....+. +.+..++ -.|++|.|+|. +.+|.-++.++...|+ +|++..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 34544333333 3344444 36999999998 5899999999999999 8888854321
Q ss_pred cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
+..+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 ~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 2222333 3899999999877766654 8886 889999854
No 417
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.50 E-value=0.26 Score=41.26 Aligned_cols=82 Identities=20% Similarity=0.321 Sum_probs=51.9
Q ss_pred Hhcc-CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627 187 NVAD-ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 187 ~~~~-~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+..+ --.|++|+|+|. ..+|.-++.++...|+ +|....+.- .++.+.++ ..
T Consensus 28 ~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T---------------------~~l~~~~~-----~A 80 (160)
T PF02882_consen 28 EYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKT---------------------KNLQEITR-----RA 80 (160)
T ss_dssp HHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTS---------------------SSHHHHHT-----TS
T ss_pred HhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCC---------------------Ccccceee-----ec
Confidence 4444 347999999997 6799999999999999 888874432 22333333 48
Q ss_pred cEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
|+|+.++|.+..+.. +.++++ ..++.+|...
T Consensus 81 DIVVsa~G~~~~i~~--~~ik~g-avVIDvG~~~ 111 (160)
T PF02882_consen 81 DIVVSAVGKPNLIKA--DWIKPG-AVVIDVGINY 111 (160)
T ss_dssp SEEEE-SSSTT-B-G--GGS-TT-EEEEE--CEE
T ss_pred cEEeeeecccccccc--ccccCC-cEEEecCCcc
Confidence 999999998766543 478886 8888888643
No 418
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.50 E-value=0.11 Score=46.87 Aligned_cols=76 Identities=18% Similarity=0.268 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~ 268 (353)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+. ..+..+ .|..+ ..++.+.+.... .+++|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4688999997 8999999999999999 88888777655321 111111 23321 223333333322 23789999
Q ss_pred eccCC
Q 018627 269 ECIGD 273 (353)
Q Consensus 269 d~~g~ 273 (353)
.+.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 99873
No 419
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.49 E-value=0.3 Score=44.63 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC-Cc------eEeCCCCCCccHHHHHHHHhcCCc
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-VT------EFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G-~~------~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
...++||++|+|. |..+..+++....+++++++.+++-.+.++++- .. .-+... ..+..+.++. ..+.+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~--~~D~~~~l~~-~~~~y 146 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ--IDDGFKFLAD-TENTF 146 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE--ECchHHHHHh-CCCCc
Confidence 4456999998753 445556666665668999999988877776631 10 000000 1222333333 24589
Q ss_pred cEEEeccC----------ChHHHHHHHHHhccCCceEEEEc
Q 018627 265 DYSFECIG----------DTGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 265 dvv~d~~g----------~~~~~~~~~~~l~~~~G~~v~~g 295 (353)
|+|+-... ..+.++.+.+.|+++ |.++...
T Consensus 147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 98875332 124467788899997 9998764
No 420
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.48 E-value=0.51 Score=43.58 Aligned_cols=71 Identities=20% Similarity=0.304 Sum_probs=51.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~ 274 (353)
.+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+... .++.+.+. ..|+||.|+..+
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~~~~e~~~-----~~d~vi~~vp~~ 69 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA-------STAKAVAE-----QCDVIITMLPNS 69 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHh-----cCCEEEEeCCCH
Confidence 368899999999988888888898 89999999998888877765311 12222222 478888888764
Q ss_pred HHHH
Q 018627 275 GMIT 278 (353)
Q Consensus 275 ~~~~ 278 (353)
....
T Consensus 70 ~~~~ 73 (296)
T PRK11559 70 PHVK 73 (296)
T ss_pred HHHH
Confidence 4433
No 421
>PRK09135 pteridine reductase; Provisional
Probab=94.48 E-value=0.27 Score=43.59 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhhHHHH----HhC-CC-ceE--eCCCCCCccHHHHHHHHh--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCEKA----KAF-GV-TEF--LNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-~~~~~~~----~~~-G~-~~~--~~~~~~~~~~~~~~~~~~-- 260 (353)
.++++||+|+ |.+|..++..+...|+ +|++++++ +++.+.+ +.. +. ... .|..+ .+.+...+....
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999998 8999999999988999 88888775 3333332 122 11 111 23321 222333333221
Q ss_pred cCCccEEEeccC
Q 018627 261 DGGADYSFECIG 272 (353)
Q Consensus 261 ~~~~dvv~d~~g 272 (353)
-+.+|++|.++|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 236899999987
No 422
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.48 E-value=0.25 Score=46.77 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=32.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 457899999999999999999999999999998763
No 423
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.47 E-value=0.6 Score=37.57 Aligned_cols=87 Identities=17% Similarity=0.292 Sum_probs=52.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHCC--CCeEEEEcCC--hhh-HHHHHhCCCceEeCCCCCCccHHHHHH-------------
Q 018627 197 VVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTN--PEK-CEKAKAFGVTEFLNPNDNNEPVQQVIK------------- 257 (353)
Q Consensus 197 vLV~Ga-g~vG~~a~~la~~~g--~~~vi~~~~~--~~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~------------- 257 (353)
|.|+|+ |++|..++.+++... + +|++.... -++ .+++++|....+...+ +...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~---~~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD---EEAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS---HHHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHHhhhcCCCCEEE
Confidence 568898 999999999999986 5 66665332 233 3345778777766553 22222332
Q ss_pred -------HHhc-CCccEEEeccCChHHHHHHHHHhccC
Q 018627 258 -------RITD-GGADYSFECIGDTGMITTALQSCCDG 287 (353)
Q Consensus 258 -------~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~ 287 (353)
++.. ..+|+++.++.+...+...+..++.+
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 2222 36777777776666677777777763
No 424
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.46 E-value=0.14 Score=44.66 Aligned_cols=35 Identities=37% Similarity=0.522 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~ 227 (353)
...+|+|.|+|++|...++.+...|.++++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999889999887
No 425
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.44 E-value=0.42 Score=46.79 Aligned_cols=106 Identities=10% Similarity=0.104 Sum_probs=63.2
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEe-CCCCCCccHHHHHHHHhc
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFL-NPNDNNEPVQQVIKRITD 261 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~-~~~~~~~~~~~~~~~~~~ 261 (353)
...++++|++||-+|+| .|..++.+++.++..+|++++.++++++.+ +++|....+ ....+..... . ....
T Consensus 232 ~~L~~~~g~~VLDlcag-~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~-~--~~~~ 307 (426)
T TIGR00563 232 TWLAPQNEETILDACAA-PGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPS-Q--WAEN 307 (426)
T ss_pred HHhCCCCCCeEEEeCCC-ccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccccc-c--cccc
Confidence 44578899999999764 233333445544433899999999998766 346765211 1110011000 0 0012
Q ss_pred CCccEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627 262 GGADYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 262 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
+.||.||- |+|. ...+..+++.++++ |++|..-.+
T Consensus 308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs 370 (426)
T TIGR00563 308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCS 370 (426)
T ss_pred cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence 37998874 4442 13667788899997 999976544
No 426
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.44 E-value=0.49 Score=35.00 Aligned_cols=35 Identities=34% Similarity=0.569 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~ 226 (353)
-.+++++|.|.|.+|..+++.+...+..++.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999999999999999999986557877765
No 427
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.44 E-value=0.36 Score=44.29 Aligned_cols=88 Identities=17% Similarity=0.291 Sum_probs=57.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChH
Q 018627 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~ 275 (353)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|...... .+. +.+ ...|+||-|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~-----~~~-~~~-----~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS-----TDL-SLL-----KDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc-----CCH-hHh-----cCCCEEEEcCCHHH
Confidence 58899999999999988888898 8999999999988888877432111 111 111 25788888887533
Q ss_pred H---HHHHHHHhccCCceEEEEcC
Q 018627 276 M---ITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 276 ~---~~~~~~~l~~~~G~~v~~g~ 296 (353)
. +......++++ -.++.+++
T Consensus 70 ~~~~~~~l~~~l~~~-~ii~d~~S 92 (279)
T PRK07417 70 LLPPSEQLIPALPPE-AIVTDVGS 92 (279)
T ss_pred HHHHHHHHHHhCCCC-cEEEeCcc
Confidence 2 22222334443 44555554
No 428
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.42 E-value=0.65 Score=43.26 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=30.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (353)
Q Consensus 193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~~~ 231 (353)
.|+++||+|+ .++|.++++.+...|+ +|+. .++.+++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchh
Confidence 5899999988 7899999999999999 7777 3454443
No 429
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.42 E-value=0.43 Score=45.00 Aligned_cols=37 Identities=38% Similarity=0.504 Sum_probs=33.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~ 230 (353)
.|.+|.|+|.|.+|..+++.++..|. +|++.+++.+.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~ 181 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK 181 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence 57899999999999999999999999 99999887654
No 430
>PRK08223 hypothetical protein; Validated
Probab=94.41 E-value=0.2 Score=46.06 Aligned_cols=36 Identities=28% Similarity=0.258 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
...+|||.|+|++|..++..+.++|.+++..+|.+.
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 457899999999999999999999999999987654
No 431
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.41 E-value=0.67 Score=36.08 Aligned_cols=92 Identities=23% Similarity=0.303 Sum_probs=60.0
Q ss_pred EEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHH
Q 018627 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (353)
Q Consensus 197 vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~ 276 (353)
|+|.|.|.+|..+++.++..+. .|++++.++++.+.+++.|.. ++.-+ ..-.+.+++..-..++.++-+++....
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd---~~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGD---ATDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES----TTSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-ccccc---chhhhHHhhcCccccCEEEEccCCHHH
Confidence 5788999999999999999776 899999999999999998854 33222 112234444322378888888776432
Q ss_pred ---HHHHHHHhccCCceEEEE
Q 018627 277 ---ITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 277 ---~~~~~~~l~~~~G~~v~~ 294 (353)
.....+.+.+. .+++..
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 12222334444 555544
No 432
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.41 E-value=0.52 Score=42.50 Aligned_cols=99 Identities=19% Similarity=0.261 Sum_probs=66.2
Q ss_pred ccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHh--
Q 018627 189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRIT-- 260 (353)
Q Consensus 189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~-- 260 (353)
.+....++||=+|.+ +|..++.+|+.+ +. +|+.++.+++..+.++ +.|..+-+... ..+..+.+.++.
T Consensus 75 ~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~--~G~a~e~L~~l~~~ 150 (247)
T PLN02589 75 LKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFR--EGPALPVLDQMIED 150 (247)
T ss_pred HHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eccHHHHHHHHHhc
Confidence 445566788888763 688888888877 34 8999999998877664 45654433332 334555665543
Q ss_pred ---cCCccEEEeccCC---hHHHHHHHHHhccCCceEE
Q 018627 261 ---DGGADYSFECIGD---TGMITTALQSCCDGWGLAV 292 (353)
Q Consensus 261 ---~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v 292 (353)
.+.||.||--... ...++.++++++++ |.++
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv 187 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIG 187 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEE
Confidence 2489988865442 24467778899996 7765
No 433
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.41 E-value=0.22 Score=42.40 Aligned_cols=96 Identities=16% Similarity=0.249 Sum_probs=61.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (353)
Q Consensus 196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~ 274 (353)
+|.|+|+ |-+|...++=|+..|- .|+++.|+++|....+.. .++. . +-.+..+....+ .++|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q-~-Difd~~~~a~~l--~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQ-K-DIFDLTSLASDL--AGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeec-c-cccChhhhHhhh--cCCceEEEeccCC
Confidence 5788898 8899999999999998 999999999998664221 1111 0 011111111111 2799999998863
Q ss_pred --H-------HHHHHHHHhccC-CceEEEEcCCCC
Q 018627 275 --G-------MITTALQSCCDG-WGLAVTLGVPKL 299 (353)
Q Consensus 275 --~-------~~~~~~~~l~~~-~G~~v~~g~~~~ 299 (353)
. ..+..+..++.. --|+..+|..++
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 1 123355666662 247888886543
No 434
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.38 E-value=0.44 Score=38.86 Aligned_cols=32 Identities=28% Similarity=0.511 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~ 227 (353)
+|+|.|+|++|..++..+...|.++++.+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999889999765
No 435
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.37 E-value=0.78 Score=43.06 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=34.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~ 234 (353)
++|.|+|+|.+|...++.+...|. .|++.+.+++.++.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 679999999999999999999999 999999998765543
No 436
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.37 E-value=0.2 Score=45.98 Aligned_cols=96 Identities=18% Similarity=0.155 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~ 270 (353)
..++++||+|+|++|.+++..+...|+.+|+++.|+.++.+.+.+ ++....+... .+..+. -..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~---~~~~~~-----~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD---LELQEE-----LADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec---ccchhc-----cccCCEEEEC
Confidence 457899999999999999999999996699999999988766643 3321101110 001111 1368999999
Q ss_pred cCChHH-----HHHHHHHhccCCceEEEEcC
Q 018627 271 IGDTGM-----ITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 271 ~g~~~~-----~~~~~~~l~~~~G~~v~~g~ 296 (353)
++.... .......+++. ..++++-.
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~DivY 222 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMIY 222 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence 874211 01123566775 77777744
No 437
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.36 E-value=0.72 Score=39.47 Aligned_cols=100 Identities=19% Similarity=0.190 Sum_probs=62.3
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
+..++.++++||=+|+| .|..++.+++.....+|++++.+++..+.+++ ++...+-... .+... ...+
T Consensus 25 ~~l~~~~~~~vLDiG~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~---~d~~~----~~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVGAG-TGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP---GEAPI----ELPG 96 (187)
T ss_pred HhcCCCCCCEEEEECCc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe---cCchh----hcCc
Confidence 45567789999999875 25556666665532389999999987776643 4433221111 11111 1124
Q ss_pred CccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627 263 GADYSFECIGD---TGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 263 ~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (353)
.+|+|+..... ...+..+.+.|+++ |+++...
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 79999864321 23567788999997 9987753
No 438
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.36 E-value=0.24 Score=43.89 Aligned_cols=78 Identities=22% Similarity=0.378 Sum_probs=48.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHHH----hCCCce-Ee--CCCCCCccHHHHHHHHhc--C
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRITD--G 262 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~~----~~G~~~-~~--~~~~~~~~~~~~~~~~~~--~ 262 (353)
++++||+|+ |.+|..++..+...|+ +|+.+ +++.++.+.+. ..+... ++ |..+ ...+.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 578999998 8999999988888899 78777 88776654332 222211 22 2221 2223232332221 3
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 439
>PRK05855 short chain dehydrogenase; Validated
Probab=94.35 E-value=0.2 Score=50.51 Aligned_cols=79 Identities=20% Similarity=0.350 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
.+.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.|... . .|..+ .....+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999998 9999999999999999 899999988776543 3334322 1 23321 222333333322 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 79999999875
No 440
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.34 E-value=0.19 Score=45.75 Aligned_cols=104 Identities=14% Similarity=0.163 Sum_probs=65.4
Q ss_pred HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc-eEeCCCCCCccHHHHHHHHhcCCc
Q 018627 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
....++.++.+||-+|+| .|..+..+++..++ +|++++.+++-.+.+++.-.. ..+... ..++.+ ....++.|
T Consensus 45 l~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~--~~D~~~--~~~~~~~F 118 (263)
T PTZ00098 45 LSDIELNENSKVLDIGSG-LGGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFE--ANDILK--KDFPENTF 118 (263)
T ss_pred HHhCCCCCCCEEEEEcCC-CChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEE--ECCccc--CCCCCCCe
Confidence 356788999999999875 35555666776787 999999999888877663211 111000 011110 01112379
Q ss_pred cEEEecc-----C---ChHHHHHHHHHhccCCceEEEEcC
Q 018627 265 DYSFECI-----G---DTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 265 dvv~d~~-----g---~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
|+|+..- + ....+..+.+.|+|+ |+++....
T Consensus 119 D~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 119 DMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred EEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 9998621 1 124567778999997 99998754
No 441
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=94.33 E-value=0.45 Score=42.62 Aligned_cols=106 Identities=22% Similarity=0.253 Sum_probs=72.5
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhc
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITD 261 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
...++.+|++|+=.|.| .|.+++.+|++.|. .+|+..+..++.++.++ ++|....+... ..|..+.+ ..
T Consensus 88 ~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~Dv~~~~---~~ 161 (256)
T COG2519 88 ARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGDVREGI---DE 161 (256)
T ss_pred HHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--eccccccc---cc
Confidence 46789999999877654 57888888888765 69999999999888774 35655432222 12222111 12
Q ss_pred CCccEEEeccCC-hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 262 GGADYSFECIGD-TGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 262 ~~~dvv~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
..+|.+|=-... -..++.+.+.|+++ |.++.+-....
T Consensus 162 ~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~ve 199 (256)
T COG2519 162 EDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPTVE 199 (256)
T ss_pred cccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCCHH
Confidence 278877655544 35688899999997 99999965443
No 442
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.32 E-value=0.29 Score=45.07 Aligned_cols=76 Identities=16% Similarity=0.197 Sum_probs=45.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CC---ceE-eCCCCCCccHHHHHHHHhcC-Ccc
Q 018627 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GV---TEF-LNPNDNNEPVQQVIKRITDG-GAD 265 (353)
Q Consensus 197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~---~~~-~~~~~~~~~~~~~~~~~~~~-~~d 265 (353)
|||+|+ |.+|..+++-+...+.++++.+++++.++-.++. + .. ... ...-. +-.-.+.+...... ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vig-Dvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIG-DVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CT-SCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceee-cccCHHHHHHHHhhcCCC
Confidence 799987 8999999988888888899999999988776633 4 21 111 11110 12224456665555 899
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
+||.++.-
T Consensus 80 iVfHaAA~ 87 (293)
T PF02719_consen 80 IVFHAAAL 87 (293)
T ss_dssp EEEE----
T ss_pred EEEEChhc
Confidence 99998764
No 443
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.29 E-value=0.39 Score=43.71 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~ 262 (353)
+.+++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+ +..+... .+ |..+ ...+.+.+.+.. -+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 4568999998 8999999999988999 888887877655433 2234322 11 2221 222333333221 23
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 78999999874
No 444
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=94.28 E-value=0.2 Score=42.79 Aligned_cols=77 Identities=23% Similarity=0.297 Sum_probs=45.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-------hhHHHHHhCCCceEe---CCCCCCccHHHHHHHHhc--C
Q 018627 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-------EKCEKAKAFGVTEFL---NPNDNNEPVQQVIKRITD--G 262 (353)
Q Consensus 196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-------~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~--~ 262 (353)
++||+|+ |++|+.+++.+...+..+++.+.++. +..+.+++.|+.-.+ |.. +..++.+.+..... +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~-d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVT-DPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TT-SHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCcc-CHHHHHHHHHHHHhccC
Confidence 6899987 99999999999999888999998882 234455666764322 222 12333333333322 3
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
+++.||.+.|.
T Consensus 81 ~i~gVih~ag~ 91 (181)
T PF08659_consen 81 PIDGVIHAAGV 91 (181)
T ss_dssp -EEEEEE----
T ss_pred Ccceeeeeeee
Confidence 77889988775
No 445
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.28 E-value=0.23 Score=47.77 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~ 227 (353)
.+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999999999887
No 446
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.27 E-value=0.48 Score=42.78 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=64.9
Q ss_pred HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC-ceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGAD 265 (353)
Q Consensus 187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~d 265 (353)
....+.++++||-+|+| .|..+..+++.....+|++++.++.-++.+++.-. ..++.. +... . ...+.+|
T Consensus 25 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~-----d~~~-~--~~~~~fD 95 (258)
T PRK01683 25 ARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA-----DIAS-W--QPPQALD 95 (258)
T ss_pred hhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC-----chhc-c--CCCCCcc
Confidence 44567788999999875 45666777777643499999999998888866421 122211 1111 1 1123799
Q ss_pred EEEeccCC------hHHHHHHHHHhccCCceEEEEc
Q 018627 266 YSFECIGD------TGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 266 vv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g 295 (353)
+|+....- ...+....+.|+++ |+++...
T Consensus 96 ~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 96 LIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred EEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 99865431 24577788899997 9988753
No 447
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.26 E-value=0.29 Score=44.04 Aligned_cols=79 Identities=20% Similarity=0.162 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhhHH----HHHhCCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-~~~~~----~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~ 261 (353)
.++++||+|+ |++|..+++.+...|+ +|+.+.++ ++..+ .+++.+... . .|..+ .....+.+.... .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999987 8999999999999999 67666553 33322 223334322 1 23331 223333333221 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|+++.+.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 379999999884
No 448
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=94.26 E-value=0.18 Score=39.29 Aligned_cols=95 Identities=23% Similarity=0.291 Sum_probs=57.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-eEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~~~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
|.+||-.|+| .|..++.+++.. ..++++++.++...+.++. .+.. .+-.. ..++.+.......+.+|+|+
T Consensus 1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~D~Iv 75 (117)
T PF13659_consen 1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVI---VGDARDLPEPLPDGKFDLIV 75 (117)
T ss_dssp TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEE---ESHHHHHHHTCTTT-EEEEE
T ss_pred CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEE---ECchhhchhhccCceeEEEE
Confidence 5678887653 344444455544 4499999999998887755 3331 11111 23444444334455999998
Q ss_pred eccCC--------------hHHHHHHHHHhccCCceEEEE
Q 018627 269 ECIGD--------------TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 269 d~~g~--------------~~~~~~~~~~l~~~~G~~v~~ 294 (353)
-+-.- ...++.+.+.|+++ |.++.+
T Consensus 76 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 76 TNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp E--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 75432 13477888999997 998876
No 449
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.26 E-value=0.51 Score=44.36 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=63.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE------eCC-CCCCccHHHHHHHHhcCCccE
Q 018627 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF------LNP-NDNNEPVQQVIKRITDGGADY 266 (353)
Q Consensus 194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~------~~~-~~~~~~~~~~~~~~~~~~~dv 266 (353)
..+|.|+|+|.+|.+.+..+...|. .|.+.++++++.+.+++.+.... +.. .....+..+.+ +..|+
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~ 77 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADF 77 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCE
Confidence 3479999999999999999988898 89999999888777765421100 000 00011222222 25899
Q ss_pred EEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627 267 SFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 267 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
|+-++... .+...++.++++ -.++.+..
T Consensus 78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 99999875 467777888875 66666644
No 450
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=94.25 E-value=0.74 Score=40.07 Aligned_cols=98 Identities=18% Similarity=0.180 Sum_probs=63.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh-cCCccEE
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT-DGGADYS 267 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~-~~~~dvv 267 (353)
++.+||-+|+| .|..+..+++.....+|++++.+++.++.+++ .+...+... ..+..+.+.... ++.+|.|
T Consensus 40 ~~~~VLDiGcG-tG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~---~~d~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFG-KGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLL---CGDAVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccC-CCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEE---ecCHHHHHHHHcCccccceE
Confidence 67889889886 46667777776543489999999998887754 233222111 122322333222 3479988
Q ss_pred EeccC--------------ChHHHHHHHHHhccCCceEEEEc
Q 018627 268 FECIG--------------DTGMITTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 268 ~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g 295 (353)
+-... ....+..+.+.|+++ |.++...
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 76432 134678888999997 9998874
No 451
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.24 E-value=0.96 Score=41.18 Aligned_cols=103 Identities=16% Similarity=0.134 Sum_probs=62.8
Q ss_pred hccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
..++++|++||-.|+|+ |..++.++..++ ...|++++.++++++.++ ..|...+.... .+.. .+.. ..+
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~---~D~~-~~~~-~~~ 139 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTN---FDGR-VFGA-AVP 139 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEec---CCHH-Hhhh-hcc
Confidence 34678999999987642 333444454442 238999999999987663 46765432222 1111 1111 123
Q ss_pred CccEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627 263 GADYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 263 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
.||+|+- |+|. ...+..+++.++++ |++|-...+
T Consensus 140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstcs 201 (264)
T TIGR00446 140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTCS 201 (264)
T ss_pred CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeCC
Confidence 6998874 4442 13677888899997 999866544
No 452
>PRK06849 hypothetical protein; Provisional
Probab=94.24 E-value=0.42 Score=46.09 Aligned_cols=96 Identities=16% Similarity=0.113 Sum_probs=61.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--EeC-CCCCCccHHHHHHHHhcC-CccEE
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLN-PNDNNEPVQQVIKRITDG-GADYS 267 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~~~-~~~~~~~~~~~~~~~~~~-~~dvv 267 (353)
...+|||+|+ .+.|+.+++.+...|. +|+++++++.......+ .++. .+. ...+...+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4588999998 5699999999999999 99999887654432211 1222 221 222234567777776655 89999
Q ss_pred EeccCChHHHHHHHHHhccCCceE
Q 018627 268 FECIGDTGMITTALQSCCDGWGLA 291 (353)
Q Consensus 268 ~d~~g~~~~~~~~~~~l~~~~G~~ 291 (353)
+-+......+......+.+. .++
T Consensus 81 IP~~e~~~~~a~~~~~l~~~-~~v 103 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY-CEV 103 (389)
T ss_pred EECChHHHhHHhhhhhhcCC-cEE
Confidence 98765432233334456553 443
No 453
>PRK08328 hypothetical protein; Provisional
Probab=94.23 E-value=0.34 Score=43.20 Aligned_cols=36 Identities=33% Similarity=0.497 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
.+.+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999999999997553
No 454
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.19 E-value=0.28 Score=43.89 Aligned_cols=77 Identities=21% Similarity=0.289 Sum_probs=46.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhH----HHHHhCCCc-eE--eCCCCCCccHHHHHHHHhc--CC
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKC----EKAKAFGVT-EF--LNPNDNNEPVQQVIKRITD--GG 263 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~----~~~~~~G~~-~~--~~~~~~~~~~~~~~~~~~~--~~ 263 (353)
+++||+|+ |++|..++..+...|+ +|++++++. ++. +.+++.+.. .+ .|..+ ..++.+.+..... +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57899998 9999999999999999 888887653 222 222333332 12 23321 2233333333221 37
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999999874
No 455
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.17 E-value=0.63 Score=44.50 Aligned_cols=94 Identities=16% Similarity=0.216 Sum_probs=62.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHC--CCCeEEEE--cCChhhHH-HHHhCCCceEeCCCCCCccHHHHH------------
Q 018627 195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGV--DTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVI------------ 256 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~--g~~~vi~~--~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~------------ 256 (353)
++|.|+|+ |++|..++.+++.. .+ +|++. +++.++++ .+++++...+...+ +...+.+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~---~~~~~~l~~~l~~~~~~v~ 77 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVAD---EEAAKELKEALAAAGIEVL 77 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHhhccCCceEE
Confidence 57899997 88999999988765 45 66666 34444433 45778877765543 1112222
Q ss_pred ------HHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEE
Q 018627 257 ------KRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVT 293 (353)
Q Consensus 257 ------~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~ 293 (353)
.++... .+|+|+.++++...+...+..++.+ -++.+
T Consensus 78 ~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 78 AGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred EChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 222222 6899999998877788888899874 55554
No 456
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.16 E-value=0.35 Score=44.97 Aligned_cols=79 Identities=19% Similarity=0.292 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhH----HHHHhCCCceEe---CCCCCCccHHHHHHHHh-cC
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKC----EKAKAFGVTEFL---NPNDNNEPVQQVIKRIT-DG 262 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~----~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~-~~ 262 (353)
.|+++||+|+ +++|...++.+...|+ +|++.+++. ++. +.+++.|..... |..+ .+...+.+.... -+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 5789999998 8999999999999999 788876542 222 223334433221 2221 112222222111 24
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
.+|++|+++|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 457
>PRK14982 acyl-ACP reductase; Provisional
Probab=94.15 E-value=0.23 Score=46.89 Aligned_cols=94 Identities=19% Similarity=0.240 Sum_probs=61.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 192 SKGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 192 ~~g~~vLV~Ga-g~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
-.+++|+|+|+ |.+|..+++.+.. .|.++++.+.+++++++.+.+ ++... ..++.+.+ ...|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~-------i~~l~~~l-----~~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK-------ILSLEEAL-----PEADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc-------HHhHHHHH-----ccCCEEE
Confidence 46789999998 8999999888864 476689999998887776543 32111 11122222 2589999
Q ss_pred eccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627 269 ECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
.+++.+..+..-...++++ -.+++++.+.
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvPR 249 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYPK 249 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence 9988644421222455775 7778887653
No 458
>PLN02256 arogenate dehydrogenase
Probab=94.14 E-value=0.56 Score=43.67 Aligned_cols=93 Identities=17% Similarity=0.192 Sum_probs=59.8
Q ss_pred ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
..-..+.+|.|+|.|.+|.+.+..++..|. +|+++++++. .+.++++|+.. + .+..+.+ ....|+||
T Consensus 31 ~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~----~~~~e~~----~~~aDvVi 97 (304)
T PLN02256 31 LEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---F----RDPDDFC----EEHPDVVL 97 (304)
T ss_pred hccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---e----CCHHHHh----hCCCCEEE
Confidence 344456789999999999999999888887 8999988864 35566677532 1 1122211 12478888
Q ss_pred eccCChHHHHHHHHH-----hccCCceEEEEcC
Q 018627 269 ECIGDTGMITTALQS-----CCDGWGLAVTLGV 296 (353)
Q Consensus 269 d~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 296 (353)
-|+... .+...++. ++++ ..++.++.
T Consensus 98 lavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 98 LCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred EecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence 888753 33333332 3454 66777766
No 459
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.14 E-value=0.32 Score=43.94 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=48.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCC---hhhHHHH-HhCCCceE--eCCCCCCccHHHHHHHHhc--
Q 018627 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTN---PEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD-- 261 (353)
Q Consensus 193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~---~~~~~~~-~~~G~~~~--~~~~~~~~~~~~~~~~~~~-- 261 (353)
.++++||+|+ +++|+++++.+...|+ +|+.+.+. +++++.+ ++++.... .|.. +.++..+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVA-SDEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCC-CHHHHHHHHHHHHHHh
Confidence 5789999984 5899999999988999 78776443 3343333 33453222 2322 13334444433322
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+.+|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998874
No 460
>PRK00536 speE spermidine synthase; Provisional
Probab=94.12 E-value=0.2 Score=45.55 Aligned_cols=100 Identities=12% Similarity=-0.064 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEE-e
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF-E 269 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~-d 269 (353)
...++|||+|+| =|.++-.++|.- ++|+.++.+++-.+..++ +..-.- ..++....+...+.+...+.||+|+ |
T Consensus 71 ~~pk~VLIiGGG-DGg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~-~~~DpRv~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 71 KELKEVLIVDGF-DLELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCCeEEEEcCC-chHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHH-hhcCCCEEEeehhhhccCCcCCEEEEc
Confidence 455999999764 245555777775 389999999999988888 321100 0111111111123332335899765 4
Q ss_pred ccCChHHHHHHHHHhccCCceEEEEcC
Q 018627 270 CIGDTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 270 ~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
+.-.++..+...++|+++ |.+|.-..
T Consensus 147 s~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 455567778888999997 99887643
No 461
>PRK04457 spermidine synthase; Provisional
Probab=94.08 E-value=1.2 Score=40.59 Aligned_cols=96 Identities=15% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCc----eEeCCCCCCccHHHHHHHHhcCCccE
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVT----EFLNPNDNNEPVQQVIKRITDGGADY 266 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~----~~~~~~~~~~~~~~~~~~~~~~~~dv 266 (353)
.++++||++|+| .|..+..+++.....++++++.+++-.+.+++. +.. .+-.. ..+..+.+.. ..+.+|+
T Consensus 65 ~~~~~vL~IG~G-~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~-~~~~yD~ 139 (262)
T PRK04457 65 PRPQHILQIGLG-GGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAV-HRHSTDV 139 (262)
T ss_pred CCCCEEEEECCC-HhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHh-CCCCCCE
Confidence 456889999876 366777777776444899999999999998773 321 11111 1234444443 2347998
Q ss_pred EEe-ccC-C--------hHHHHHHHHHhccCCceEEE
Q 018627 267 SFE-CIG-D--------TGMITTALQSCCDGWGLAVT 293 (353)
Q Consensus 267 v~d-~~g-~--------~~~~~~~~~~l~~~~G~~v~ 293 (353)
|+- ... . .+.++.+.+.|+++ |.++.
T Consensus 140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 873 211 1 36678888999997 99886
No 462
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.07 E-value=0.27 Score=44.38 Aligned_cols=79 Identities=20% Similarity=0.348 Sum_probs=48.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHHHH-HhCCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~ 261 (353)
.++++||+|+ +++|.++++.+...|+ +|+.++++. +..+.+ ++++... . .|..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 5789999985 6899999999888999 888887653 333333 3344211 1 23221 223333333322 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|++++++|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999998874
No 463
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.06 E-value=0.74 Score=42.34 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=63.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCceEe--CCCC--CCccHHHHHHHHhcCCccEEEe
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFL--NPND--NNEPVQQVIKRITDGGADYSFE 269 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~~~~--~~~~--~~~~~~~~~~~~~~~~~dvv~d 269 (353)
++|||+|+| -|-.+-.+++....++++.++.+++=.+.++++ +-...- +.+- ...+-.+.+++. ..+||+|+-
T Consensus 78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~-~~~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDC-EEKFDVIIV 155 (282)
T ss_pred CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhC-CCcCCEEEE
Confidence 699999764 455566788888788999999999999999883 211100 0000 012334445543 237997765
Q ss_pred -ccCC---------hHHHHHHHHHhccCCceEEEE
Q 018627 270 -CIGD---------TGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 270 -~~g~---------~~~~~~~~~~l~~~~G~~v~~ 294 (353)
+... .+.++...++|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 3322 45678888999997 988876
No 464
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.05 E-value=0.32 Score=41.60 Aligned_cols=94 Identities=17% Similarity=0.146 Sum_probs=56.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
++++||-+|+| .|..++.+++.....+|++++.+++..+.+ ++.+...+... ..+..+ + ...+.||+|+
T Consensus 42 ~~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i---~~d~~~-~--~~~~~fD~I~ 114 (181)
T TIGR00138 42 DGKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIV---NGRAED-F--QHEEQFDVIT 114 (181)
T ss_pred CCCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEE---ecchhh-c--cccCCccEEE
Confidence 38899999874 344444555544333899999999866554 33554332111 112221 1 1134899888
Q ss_pred eccC--ChHHHHHHHHHhccCCceEEEE
Q 018627 269 ECIG--DTGMITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 269 d~~g--~~~~~~~~~~~l~~~~G~~v~~ 294 (353)
-..- -+..++.+.+.++++ |+++..
T Consensus 115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 115 SRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 6531 134556677889997 998876
No 465
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.04 E-value=0.46 Score=42.24 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
...+|+|.|+|++|..++..+...|.++++.+|.+.
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 357899999999999999999999999998885543
No 466
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.00 E-value=0.18 Score=45.72 Aligned_cols=73 Identities=16% Similarity=0.119 Sum_probs=52.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCC
Q 018627 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~ 273 (353)
+|||.|+++-|..++..+...|. +|+++.+++...+.+.+.|...++.-. .+-. .+.++..+ ++|+|+|++..
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~---l~~~-~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGA---LDPQ-ELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECC---CCHH-HHHHHHHhcCCCEEEEcCCH
Confidence 69999995569999988888898 898888888888788777766655322 1222 24344334 89999998763
No 467
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.98 E-value=0.45 Score=44.39 Aligned_cols=78 Identities=24% Similarity=0.285 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHH-HhCCC---c-eE--eCCCCCCccHHHHHHHHh--cC
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRIT--DG 262 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~-~~~G~---~-~~--~~~~~~~~~~~~~~~~~~--~~ 262 (353)
++++||+|+ +++|.+++..+...| + +|+.+.+++++.+.+ +++.. . .. .|..+ ..+....+.+.. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 578999998 899999999888889 7 888888888776544 33321 1 11 23321 222333333321 24
Q ss_pred CccEEEeccCC
Q 018627 263 GADYSFECIGD 273 (353)
Q Consensus 263 ~~dvv~d~~g~ 273 (353)
++|++|.++|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999998873
No 468
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=93.97 E-value=0.37 Score=44.28 Aligned_cols=130 Identities=17% Similarity=0.160 Sum_probs=84.0
Q ss_pred hccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC---------CCccHHHHHHH
Q 018627 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND---------NNEPVQQVIKR 258 (353)
Q Consensus 188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~---------~~~~~~~~~~~ 258 (353)
.+...++..+|+.|.|..|+.++..++.+|+ .|...+....+.+..+.+|+...-..++ -.++|..+-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3345567889999999999999999999999 8998888888888888788765322111 01123332223
Q ss_pred Hhc---CCccEEEeccCC-----hHH-HHHHHHHhccCCceEEEEcCCCCCCceec-chhhh-h-cCcEEEeee
Q 018627 259 ITD---GGADYSFECIGD-----TGM-ITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYGLF-L-SGRTLKGSL 320 (353)
Q Consensus 259 ~~~---~~~dvv~d~~g~-----~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~-~-~~~~i~g~~ 320 (353)
+.. .++|+||-+.=- |.+ .......|+|+ ..+|++....+ ....+ .+... . ++++|+|-.
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~G-GNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETG-GNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcC-CCcccccCCeEEEeCCeEEEeec
Confidence 222 289999987532 222 45666899997 99998876444 12121 12222 2 377887764
No 469
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.94 E-value=0.33 Score=40.42 Aligned_cols=84 Identities=12% Similarity=0.171 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc-------eEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-------EFLNPNDNNEPVQQVIKRITDGGADYSF 268 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~-------~~~~~~~~~~~~~~~~~~~~~~~~dvv~ 268 (353)
+|.|+|+|..|.+++..+...|. +|....++++..+.+++-+.. ..-..-....++.+.++ +.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence 57899999999999999999997 999999999888877653221 00000000123444443 589999
Q ss_pred eccCChHHHHHHHHHhcc
Q 018627 269 ECIGDTGMITTALQSCCD 286 (353)
Q Consensus 269 d~~g~~~~~~~~~~~l~~ 286 (353)
-++.. ..++..++.+++
T Consensus 75 iavPs-~~~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPS-QAHREVLEQLAP 91 (157)
T ss_dssp E-S-G-GGHHHHHHHHTT
T ss_pred ecccH-HHHHHHHHHHhh
Confidence 99886 456677776666
No 470
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.94 E-value=0.26 Score=43.61 Aligned_cols=70 Identities=17% Similarity=0.297 Sum_probs=49.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--hHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (353)
Q Consensus 197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g 272 (353)
|+|.|+ |.+|..+++.+...+. +|.+..|+.. ..+.+++.|+.-+. .+ .+-.+.+.+... ++|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~-~d---~~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVE-AD---YDDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEE-S----TT-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEee-cc---cCCHHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999999888 7888777753 45667888986542 21 111233333222 7999999888
No 471
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.93 E-value=0.45 Score=40.46 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=29.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~ 228 (353)
+|+|.|+|++|...++.+...|.++++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899998775
No 472
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=93.89 E-value=2.5 Score=39.02 Aligned_cols=58 Identities=26% Similarity=0.390 Sum_probs=43.3
Q ss_pred HhccCCCCCEEEEEc-CChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCC
Q 018627 187 NVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNP 245 (353)
Q Consensus 187 ~~~~~~~g~~vLV~G-ag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~ 245 (353)
+...+++|++| |=+ +|.+|.+++.+|+.+|++-+++. .-+.+|.++++.+|+.-+...
T Consensus 55 ~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~ 115 (300)
T COG0031 55 KRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTP 115 (300)
T ss_pred HcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcC
Confidence 44569999954 545 48899999999999999444444 346688899999998766543
No 473
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=93.87 E-value=0.38 Score=42.73 Aligned_cols=79 Identities=15% Similarity=0.242 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHH----HHhCCCce-Ee--CCCCCCccHHHHHHHHhc--
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~----~~~~G~~~-~~--~~~~~~~~~~~~~~~~~~-- 261 (353)
.++++||+|+ |++|..++..+...|+ +|+++. +++++.+. +++.+... .+ |..+ ...+.+.+.+...
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4789999997 8999999998888999 676653 34444332 22334322 12 2221 2233333333222
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+.+|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 368999999875
No 474
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=93.87 E-value=0.9 Score=41.77 Aligned_cols=89 Identities=20% Similarity=0.306 Sum_probs=63.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh-HHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~ 274 (353)
+|-++|-|.+|.-+++-+...|. .+.+.++++++ .+.+++.|+...- +..+.+. ..|+||-+++.+
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~-------s~~eaa~-----~aDvVitmv~~~ 68 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA-------SPAEAAA-----EADVVITMLPDD 68 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC-------CHHHHHH-----hCCEEEEecCCH
Confidence 57788999999999999999999 99999999999 8888888876432 1223332 378888888775
Q ss_pred HHHHHHH-------HHhccCCceEEEEcCCC
Q 018627 275 GMITTAL-------QSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 275 ~~~~~~~-------~~l~~~~G~~v~~g~~~ 298 (353)
...+..+ ..++++ ..+|++....
T Consensus 69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis 98 (286)
T COG2084 69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTIS 98 (286)
T ss_pred HHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence 5544433 234454 6666665543
No 475
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.87 E-value=0.36 Score=49.62 Aligned_cols=77 Identities=21% Similarity=0.388 Sum_probs=57.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (353)
Q Consensus 194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~ 273 (353)
.++|+|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...++ -+ ..-.+.+++.--+.+|.++-+++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GD---at~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GD---ATRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-Ee---CCCHHHHHhcCCCcCCEEEEEeCC
Confidence 3679999999999999999999999 899999999999999998865332 11 112234443322378999988887
Q ss_pred hH
Q 018627 274 TG 275 (353)
Q Consensus 274 ~~ 275 (353)
++
T Consensus 475 ~~ 476 (621)
T PRK03562 475 PQ 476 (621)
T ss_pred HH
Confidence 44
No 476
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.85 E-value=0.33 Score=45.23 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=31.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~ 231 (353)
.|++|||+|+ |.+|..++..+...|. +|+++.++.++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence 4789999998 9999999998888899 888776766543
No 477
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.78 E-value=0.85 Score=42.92 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=63.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHH-HCCCCeEEEEcCChhhHHHHH-hC----CCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAK-AF----GVTEFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~-~~g~~~vi~~~~~~~~~~~~~-~~----G~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
.+..++++|+|+|..+.+.+..+. ..++++|.+..++.++.+.+. ++ |.. +... .+..+.++ ..
T Consensus 126 ~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av~-----~a 195 (326)
T TIGR02992 126 REDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAMS-----GA 195 (326)
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHhc-----cC
Confidence 345678999999999988877775 578778999999998877553 22 432 2211 22333332 59
Q ss_pred cEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
|+|+.|++....+- ..+.++++ -++..+|....
T Consensus 196 DiVvtaT~s~~p~i-~~~~l~~g-~~i~~vg~~~p 228 (326)
T TIGR02992 196 DIIVTTTPSETPIL-HAEWLEPG-QHVTAMGSDAE 228 (326)
T ss_pred CEEEEecCCCCcEe-cHHHcCCC-cEEEeeCCCCC
Confidence 99999987643321 12457885 67777886543
No 478
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.78 E-value=0.71 Score=43.16 Aligned_cols=87 Identities=21% Similarity=0.258 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
-.|++|.|+|-|.+|.+.++.++..|. +|++..+.....+.+++.|+. + .++.+.++ ..|+|+-++
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v-------~sl~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-V-------MSVSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-E-------CCHHHHHh-----cCCEEEEeC
Confidence 368999999999999999999999999 887776655555666666753 1 12333333 489999988
Q ss_pred CChHH---H-HHHHHHhccCCceEEEE
Q 018627 272 GDTGM---I-TTALQSCCDGWGLAVTL 294 (353)
Q Consensus 272 g~~~~---~-~~~~~~l~~~~G~~v~~ 294 (353)
..+.. + ...+..++++ .++.+
T Consensus 80 Pd~~t~~V~~~eil~~MK~G--aiL~f 104 (335)
T PRK13403 80 PDEQQAHVYKAEVEENLREG--QMLLF 104 (335)
T ss_pred CChHHHHHHHHHHHhcCCCC--CEEEE
Confidence 75332 2 2344566764 44444
No 479
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.76 E-value=0.93 Score=44.44 Aligned_cols=105 Identities=13% Similarity=0.141 Sum_probs=64.4
Q ss_pred hccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhcC
Q 018627 188 VADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDG 262 (353)
Q Consensus 188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
..++++|++||=.|+| .|..+++++..+ +..+|+++|.++++++.++ ++|...+.... .+.. .+.....+
T Consensus 232 ~l~~~~g~~VLD~cag-pGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~---~Da~-~l~~~~~~ 306 (431)
T PRK14903 232 LMELEPGLRVLDTCAA-PGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKI---ADAE-RLTEYVQD 306 (431)
T ss_pred HhCCCCCCEEEEeCCC-ccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEE---Cchh-hhhhhhhc
Confidence 4578899999998764 233444555555 2238999999999988774 46765421111 1111 11112234
Q ss_pred CccEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCCC
Q 018627 263 GADYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVPK 298 (353)
Q Consensus 263 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (353)
.||.|+- |+|. ...+..+++.++++ |+++..-.+-
T Consensus 307 ~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs~ 369 (431)
T PRK14903 307 TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCTV 369 (431)
T ss_pred cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECCC
Confidence 7998874 4432 12366788899997 9988765543
No 480
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=93.75 E-value=0.38 Score=48.77 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=63.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~ 274 (353)
++++|.|.|.+|+.+++.++..|. .++++|.++++.+.+++.|...+.-- ..-.+.+++.--+.+|.++-++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD----~~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN----AANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC----CCCHHHHHhcCccccCEEEEEcCCh
Confidence 678999999999999999999998 89999999999999999886654421 1112334433223788888776653
Q ss_pred HH---HHHHHHHhccCCceEEEE
Q 018627 275 GM---ITTALQSCCDGWGLAVTL 294 (353)
Q Consensus 275 ~~---~~~~~~~l~~~~G~~v~~ 294 (353)
.. +-...+...+. .+++.-
T Consensus 493 ~~~~~iv~~~~~~~~~-~~iiar 514 (558)
T PRK10669 493 YEAGEIVASAREKRPD-IEIIAR 514 (558)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEE
Confidence 22 22233444444 455543
No 481
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=93.74 E-value=0.55 Score=41.72 Aligned_cols=73 Identities=23% Similarity=0.378 Sum_probs=54.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh--CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA--FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~ 273 (353)
+++|.|+|.+|..+++.+...|. .|++++.++++.+...+ ++...+.-. ..-.+.+++.--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd----~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGD----ATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEec----CCCHHHHHhcCCCcCCEEEEeeCC
Confidence 68899999999999999999999 99999999999887433 554443322 122345555433389999988886
No 482
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=93.71 E-value=0.96 Score=39.65 Aligned_cols=100 Identities=22% Similarity=0.247 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh-cCCccEEE
Q 018627 191 ISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGGADYSF 268 (353)
Q Consensus 191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~dvv~ 268 (353)
++++++||=+|+| .|.....+++..+. .+|++++.++.. ..-++ .++.-+-.+....+.+.+.. .+.+|+|+
T Consensus 49 ~~~~~~VLDlG~G-tG~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~~~~~~D~V~ 122 (209)
T PRK11188 49 FKPGMTVVDLGAA-PGGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERVGDSKVQVVM 122 (209)
T ss_pred CCCCCEEEEEccc-CCHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence 5789999999874 24444455555542 389999987621 11122 23322211223334444433 34899999
Q ss_pred ecc-----CC------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627 269 ECI-----GD------------TGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 269 d~~-----g~------------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
... |. ...+..+.+.|+++ |+++..-..
T Consensus 123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~~~~ 167 (209)
T PRK11188 123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVKVFQ 167 (209)
T ss_pred cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEEec
Confidence 743 21 12467778899997 999885443
No 483
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.70 E-value=0.38 Score=43.18 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
.++++||+|+ |++|..+++.+...|+ +|+++.+ +.++.+.+ +..+... .+ |..+ ..++.+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5678999998 8999999999988999 7766544 44443322 2224321 12 3221 223333333221 2
Q ss_pred CCccEEEeccCC
Q 018627 262 GGADYSFECIGD 273 (353)
Q Consensus 262 ~~~dvv~d~~g~ 273 (353)
+++|++|.+.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 479999999874
No 484
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.69 E-value=0.67 Score=38.72 Aligned_cols=87 Identities=24% Similarity=0.293 Sum_probs=54.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-hHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
.+++|.|+|.|.-|.+.++-+|-.|. +|++..+..+ ..+.+++.|.. ..+..+.++ ..|+|+-.+
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~--------v~~~~eAv~-----~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE--------VMSVAEAVK-----KADVVMLLL 68 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E--------CCEHHHHHH-----C-SEEEE-S
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe--------eccHHHHHh-----hCCEEEEeC
Confidence 57899999999999999999999999 6665555554 88888888864 234555555 389999887
Q ss_pred CCh---HHH-HHHHHHhccCCceEEEEc
Q 018627 272 GDT---GMI-TTALQSCCDGWGLAVTLG 295 (353)
Q Consensus 272 g~~---~~~-~~~~~~l~~~~G~~v~~g 295 (353)
... ..+ +.....|++ |..+.+.
T Consensus 69 PD~~q~~vy~~~I~p~l~~--G~~L~fa 94 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKP--GATLVFA 94 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-T--T-EEEES
T ss_pred ChHHHHHHHHHHHHhhCCC--CCEEEeC
Confidence 642 222 222246676 4555443
No 485
>PLN02686 cinnamoyl-CoA reductase
Probab=93.69 E-value=0.38 Score=46.01 Aligned_cols=45 Identities=18% Similarity=0.172 Sum_probs=35.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (353)
Q Consensus 191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 236 (353)
...+++|||+|+ |.+|..++..+...|+ +|+++.++.++.+.+++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 345789999998 8999999999999999 88877677665544433
No 486
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=93.67 E-value=0.41 Score=42.27 Aligned_cols=77 Identities=18% Similarity=0.257 Sum_probs=46.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH-Hh---CCCc-eE--eCCCCCCccHHHHHHHHh--cCC
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KA---FGVT-EF--LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~---~G~~-~~--~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
+++||+|+ |++|..++..+...|+ +|+++.+ ++++.+.. .+ .+.. .. .|..+ ..++.+.+.+.. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 46899997 8999999999999999 7777766 44443322 22 2211 11 23321 222333333221 237
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 487
>PRK08291 ectoine utilization protein EutC; Validated
Probab=93.66 E-value=1.1 Score=42.21 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=62.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHh-----CCCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKA-----FGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~d 265 (353)
+..++++|+|+|..|.+.+..+.. .+.++|.+..+++++.+.+.+ +|.. +..+ .++.+.+. ..|
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al~-----~aD 199 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAVA-----GAD 199 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHHc-----cCC
Confidence 445789999999999887776664 577789999999988776633 2432 2222 22333332 489
Q ss_pred EEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (353)
Q Consensus 266 vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (353)
+|+.+++....+-.. ..++++ -++..+|....
T Consensus 200 iVi~aT~s~~p~i~~-~~l~~g-~~v~~vg~d~~ 231 (330)
T PRK08291 200 IIVTTTPSEEPILKA-EWLHPG-LHVTAMGSDAE 231 (330)
T ss_pred EEEEeeCCCCcEecH-HHcCCC-ceEEeeCCCCC
Confidence 999998764332211 347775 67888876543
No 488
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=93.64 E-value=1.7 Score=33.88 Aligned_cols=88 Identities=16% Similarity=0.255 Sum_probs=60.9
Q ss_pred EEEEEcCChHHHHHHHHHHHC--CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 196 TVVIFGLGTVGLSVAQGAKAR--GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 196 ~vLV~Gag~vG~~a~~la~~~--g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
+|.|+|.|..|......++.. +. +++ ++++++++.+.+ +++|.. .+ .++.+.+.. ..+|+|+-++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~~---~~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLAD---EDVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHHH---TTESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHHh---hcCCEEEEec
Confidence 588999999998887666655 45 444 567777777654 567776 32 123333332 2699999999
Q ss_pred CChHHHHHHHHHhccCCceEEEEcC
Q 018627 272 GDTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
......+.+..++.. |.-|.+.-
T Consensus 71 p~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 71 PPSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred CCcchHHHHHHHHHc--CCEEEEEc
Confidence 987888888888887 55666643
No 489
>PRK07578 short chain dehydrogenase; Provisional
Probab=93.64 E-value=1 Score=38.62 Aligned_cols=63 Identities=17% Similarity=0.395 Sum_probs=40.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (353)
Q Consensus 196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~ 273 (353)
++||+|+ +++|..++..+... . +|++++++... ...|..+ .+++.+.+.+. +++|+++.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~~----------~~~D~~~-~~~~~~~~~~~--~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSGD----------VQVDITD-PASIRALFEKV--GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCCc----------eEecCCC-hHHHHHHHHhc--CCCCEEEECCCC
Confidence 6899987 89999888877766 6 88888776531 1123321 22333333221 378999988874
No 490
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=93.64 E-value=0.35 Score=43.04 Aligned_cols=77 Identities=22% Similarity=0.206 Sum_probs=46.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCC
Q 018627 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~ 263 (353)
+++||+|+ |++|..+++.+...|+ +|+.+ .+++++.+.+ ++.+... .+ |.. +..++.+.+.+.. -++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVA-NEADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccC-CHHHHHHHHHHHHHhcCC
Confidence 57999998 8999999999999999 66554 4555544332 3333322 11 222 1233333333322 237
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 9999998873
No 491
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.62 E-value=0.46 Score=41.94 Aligned_cols=78 Identities=18% Similarity=0.289 Sum_probs=46.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEE-EcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (353)
Q Consensus 193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~ 261 (353)
+.++|||+|+ |.+|..++..+...|. +|++ +.++.+..+.+ ++.+... .+ |..+ ...+.+.+.... .
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 3578999998 8999999999999999 6655 44444333322 2233221 22 2221 223333333221 1
Q ss_pred CCccEEEeccC
Q 018627 262 GGADYSFECIG 272 (353)
Q Consensus 262 ~~~dvv~d~~g 272 (353)
+++|+++.++|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37999999887
No 492
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=93.61 E-value=1 Score=44.47 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=64.1
Q ss_pred cCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627 190 DISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (353)
Q Consensus 190 ~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
++++|++||-..|++=|. ..++|..+ +-..|++.+.++.|++.+ +++|...+.....+...+ .....+.|
T Consensus 110 ~~~pg~~VLD~CAAPGgK-Tt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~----~~~~~~~f 184 (470)
T PRK11933 110 DDNAPQRVLDMAAAPGSK-TTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVF----GAALPETF 184 (470)
T ss_pred CCCCCCEEEEeCCCccHH-HHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhh----hhhchhhc
Confidence 678999999986533232 33444444 223799999999998766 558887654332112212 22223468
Q ss_pred cEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627 265 DYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 265 dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
|.|+- |+|. ...+..+++.++++ |++|-.-.+
T Consensus 185 D~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpG-G~LVYSTCT 244 (470)
T PRK11933 185 DAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPG-GTLVYSTCT 244 (470)
T ss_pred CeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEECCC
Confidence 86664 6654 14567788999997 998755543
No 493
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.61 E-value=0.5 Score=44.74 Aligned_cols=42 Identities=21% Similarity=0.221 Sum_probs=34.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH
Q 018627 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233 (353)
Q Consensus 191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~ 233 (353)
-..+.+|||+|+ |.+|..+++.+...|. +|++++++.++.+.
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~ 49 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLH 49 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Confidence 346789999997 8999999999999999 88888777665443
No 494
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=93.60 E-value=0.75 Score=40.41 Aligned_cols=75 Identities=27% Similarity=0.350 Sum_probs=44.9
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHH----HHHhCCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (353)
Q Consensus 197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~----~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d 265 (353)
+||+|+ |.+|..++..+...|+ +|++++++. ++.+ .+++.|... . .|..+ ...+.+.+.... -+++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA-KVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSD-REDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 578887 8999999999988899 788887654 3322 233345322 1 23221 222222222221 13789
Q ss_pred EEEeccCC
Q 018627 266 YSFECIGD 273 (353)
Q Consensus 266 vv~d~~g~ 273 (353)
.++.+.|.
T Consensus 79 ~vi~~ag~ 86 (239)
T TIGR01830 79 ILVNNAGI 86 (239)
T ss_pred EEEECCCC
Confidence 99998884
No 495
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.59 E-value=0.67 Score=42.56 Aligned_cols=94 Identities=19% Similarity=0.282 Sum_probs=65.7
Q ss_pred hhchhhhHHHHHHHHhccCC-CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627 173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (353)
Q Consensus 173 ~l~~~~~ta~~al~~~~~~~-~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 250 (353)
..||+....+.. .+..++. .|++|+|+|- ..+|.-++.++...|+ +|+.+.+. ..
T Consensus 143 ~~PcTp~av~~l-l~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVtv~hs~---------------------T~ 199 (287)
T PRK14176 143 LVPCTPHGVIRA-LEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNA-TVSVCHVF---------------------TD 199 (287)
T ss_pred CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-EEEEEecc---------------------CC
Confidence 345443333333 3445543 7999999997 4599999999999999 88887432 12
Q ss_pred cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (353)
Q Consensus 251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (353)
++.+.++ .+|+++.++|.+..+.. ..++++ ..++.+|..
T Consensus 200 ~l~~~~~-----~ADIvv~AvG~p~~i~~--~~vk~g-avVIDvGin 238 (287)
T PRK14176 200 DLKKYTL-----DADILVVATGVKHLIKA--DMVKEG-AVIFDVGIT 238 (287)
T ss_pred CHHHHHh-----hCCEEEEccCCccccCH--HHcCCC-cEEEEeccc
Confidence 3333443 38999999998776533 588986 889999974
No 496
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.57 E-value=0.44 Score=45.06 Aligned_cols=99 Identities=21% Similarity=0.149 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
.++.+||-+|+|. |..+..+++..+..+++++|.+++-++.+++.....-+... ..+..+ + ...++.||+|+.+.
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i--~gD~e~-l-p~~~~sFDvVIs~~ 186 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKII--EGDAED-L-PFPTDYADRYVSAG 186 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEE--eccHHh-C-CCCCCceeEEEEcC
Confidence 4678999998864 66666777776544899999999888877663211101110 111111 1 11233799888643
Q ss_pred C------ChHHHHHHHHHhccCCceEEEEcC
Q 018627 272 G------DTGMITTALQSCCDGWGLAVTLGV 296 (353)
Q Consensus 272 g------~~~~~~~~~~~l~~~~G~~v~~g~ 296 (353)
. ....+..+.+.|+++ |+++.++.
T Consensus 187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 2 124577888999997 99988764
No 497
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=93.56 E-value=2.2 Score=37.75 Aligned_cols=100 Identities=12% Similarity=0.064 Sum_probs=58.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (353)
Q Consensus 193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~ 271 (353)
++.+|||+|+|.++.-=+..+...|+ +|+++...- +.+..+.+.|....+... +.+.- + .++++||-++
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~r~-----~~~~d--l--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIKGN-----YDKEF--I--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEeCC-----CChHH--h--CCCcEEEECC
Confidence 57899999999999887888888899 787774322 223333333433333211 11110 1 3689999999
Q ss_pred CChHHHHHHHHHhccCCceEEEEcCCCCCCce
Q 018627 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303 (353)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 303 (353)
+.+..-.......+.. +.++.....+...++
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dF 124 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLC 124 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeE
Confidence 8755434444445553 667766544333343
No 498
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.53 E-value=0.82 Score=40.37 Aligned_cols=47 Identities=32% Similarity=0.427 Sum_probs=38.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh----------hhHHHHHhCC
Q 018627 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP----------EKCEKAKAFG 238 (353)
Q Consensus 192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~----------~~~~~~~~~G 238 (353)
-.|.+|+|.|-|.+|..+++.+...|.+.|.+++++. +.++..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 3689999999999999999999999986666777777 6666665554
No 499
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.52 E-value=0.41 Score=44.59 Aligned_cols=97 Identities=12% Similarity=0.036 Sum_probs=57.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCceEeCCCCCCccHHH-HHHHHhcCCccEEEeccC
Q 018627 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQ-VIKRITDGGADYSFECIG 272 (353)
Q Consensus 195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~-~~~~~~~~~~dvv~d~~g 272 (353)
.+|+|+|+|++|...+..+...|. .|+.+.+..++++.+++- |.. +..... ...+.. .......+.+|+||-|+-
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECC
Confidence 369999999999888888778898 888888887787777653 432 211110 000000 000001137899999986
Q ss_pred ChHHHHHHHH----HhccCCceEEEEcC
Q 018627 273 DTGMITTALQ----SCCDGWGLAVTLGV 296 (353)
Q Consensus 273 ~~~~~~~~~~----~l~~~~G~~v~~g~ 296 (353)
.. ....+++ .+.++ ..++.+.+
T Consensus 80 ~~-~~~~al~~l~~~l~~~-t~vv~lQN 105 (305)
T PRK05708 80 AY-DAEPAVASLAHRLAPG-AELLLLQN 105 (305)
T ss_pred HH-hHHHHHHHHHhhCCCC-CEEEEEeC
Confidence 53 2334443 44555 66666654
No 500
>PRK07201 short chain dehydrogenase; Provisional
Probab=93.52 E-value=0.33 Score=50.11 Aligned_cols=78 Identities=28% Similarity=0.361 Sum_probs=51.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (353)
Q Consensus 194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~ 263 (353)
++++||+|+ |++|..++..+...|+ +|+++++++++.+.+. +.+... + .|..+ ..++.+.+.+.. .+.
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 678999998 8999999999988999 8999999887765442 223222 1 23221 223333333322 237
Q ss_pred ccEEEeccCC
Q 018627 264 ADYSFECIGD 273 (353)
Q Consensus 264 ~dvv~d~~g~ 273 (353)
+|+++.++|.
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 9999999884
Done!