BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018632
(353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XF59|HIBC4_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial
OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1
Length = 401
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/328 (68%), Positives = 269/328 (82%), Gaps = 4/328 (1%)
Query: 28 VTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GS 83
++DL QVLVEG SR AILNRP ALNAL T+MG +L KL+K WE DPNIGF GS
Sbjct: 31 TSEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGS 90
Query: 84 GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAG 143
GRAFCAGGDIVSLYH +G + ++FF +LYSFIYLLGT+LKPHVAILNGVTMGGG G
Sbjct: 91 GRAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTG 150
Query: 144 VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMA 203
VSIPGTFRVA +T+FATPET+IGFHPDAGASF LSHLPG LGE+L LTG KL+GAEM+A
Sbjct: 151 VSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLA 210
Query: 204 CGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 263
CGLATHY SE++P++EE+L KL+TDDPSV+E+CLEK +++ +P+K VI RID+++KCF
Sbjct: 211 CGLATHYIRSEEVPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCF 270
Query: 264 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVR 323
DTVEEIIDSLE EAS D WC +TLR LKE+SPLSLKV+LRSIREGR QT D+CL+R
Sbjct: 271 SHDTVEEIIDSLEIEASRRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIR 330
Query: 324 EYRMSLQGVSRLISGDFYEVSNFQILNK 351
EYRMSLQG+ +SG+F E ++++K
Sbjct: 331 EYRMSLQGLIGPMSGNFCEGVRARLIDK 358
>sp|Q8RXN4|HIBC5_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At4g31810 PE=2 SV=1
Length = 409
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/362 (57%), Positives = 277/362 (76%), Gaps = 11/362 (3%)
Query: 1 MQRLK-ISNISRYFNDLRALSQHRTSSSVTD------DLCNQVLVEGKANSRMAILNRPS 53
MQ +K + +S +R++S R S++ + D +QVLVEGKA SR AILN PS
Sbjct: 1 MQTVKALRRVSEPLQWVRSVSYGRRFSALPNYSASDADFEDQVLVEGKAKSRAAILNNPS 60
Query: 54 ALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109
+LNAL+ M +L +L+++WE +P I F GSG+ FC+G D++SLYH +N+G EE K
Sbjct: 61 SLNALSAPMVGRLKRLYESWEENPAISFVLMKGSGKTFCSGADVLSLYHSINEGNTEESK 120
Query: 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH 169
FF LY F+YL GT+LKP++AI++GVTMG G G+S+PG FRVA KTV A PE IGFH
Sbjct: 121 LFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFH 180
Query: 170 PDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTD 229
PDAGAS+YLS LPG+LGE+LALTG KLNG EM+ACGLATHY ++ +LPLIEE +GKL+TD
Sbjct: 181 PDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEERIGKLLTD 240
Query: 230 DPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGS 289
DP+VIE L +Y DLVYPD +SV+H+I+++DK FGLDTVEEII+++E+EA+ + WC
Sbjct: 241 DPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKYFGLDTVEEIIEAMENEAANSCNEWCKK 300
Query: 290 TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 349
TL+ +KEASPLSLK++L+SIREGRFQT D+CL EYR+S+ GVS+++SGDF E +++
Sbjct: 301 TLKQIKEASPLSLKITLQSIREGRFQTLDQCLTHEYRISICGVSKVVSGDFCEGIRARLV 360
Query: 350 NK 351
+K
Sbjct: 361 DK 362
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis
thaliana GN=At2g30660 PE=2 SV=1
Length = 378
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/322 (48%), Positives = 213/322 (66%), Gaps = 4/322 (1%)
Query: 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCA 89
+QVLVE K++ R+ LNRP LNAL NM ++L +LF+A+E DP++ G GRAFCA
Sbjct: 5 SQVLVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFCA 64
Query: 90 GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 149
GGD+ + M QGK DFFR Y+ Y++ T+ KP V+ILNG+ MG GAGVSI G
Sbjct: 65 GGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGR 124
Query: 150 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 209
FR+A TVFA PET +G PD GAS++LS LPG GE++ LTGA+L+GAE++ACGLATH
Sbjct: 125 FRIATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGLATH 184
Query: 210 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 269
+ S +L +E +L K+ + DPS + L+ Y+ + + S HR+D++D+CF T+E
Sbjct: 185 FVPSTRLTALETDLCKVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKRTME 244
Query: 270 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSL 329
EII +LE E + D W +T+R LK++SP SLK+SLRSIREGR Q CL REYRM
Sbjct: 245 EIISALERETTQELDDWSLTTIRALKKSSPSSLKISLRSIREGRLQGVGHCLTREYRMVC 304
Query: 330 QGVSRLISGDFYEVSNFQILNK 351
+ +S D E +++K
Sbjct: 305 HVMKGDLSKDLVEGCRAILIDK 326
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1
PE=1 SV=1
Length = 378
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 210/313 (67%), Gaps = 4/313 (1%)
Query: 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCA 89
+QVLVE K++ R+ LNRP LNAL+ +M ++L +LF A+E DP++ G GRAFCA
Sbjct: 9 SQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCA 68
Query: 90 GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 149
GGD+ ++ +NQG ++F + Y Y++ T+ K V+ILNG+ MGGGAGVS+ G
Sbjct: 69 GGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGR 128
Query: 150 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 209
FR+A TVFA PET +G PD GAS++LS LPG GE++ LTGA+L+GAEM+ACGLATH
Sbjct: 129 FRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 188
Query: 210 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 269
+ S +L +E +L ++ ++DP+ L+ Y+ + S R+D++D+CF TVE
Sbjct: 189 FVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTVE 248
Query: 270 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSL 329
EII +LE EA+ D W +T++ LK+ SP SLK+SLRSIREGR Q +CL+REYRM
Sbjct: 249 EIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCLIREYRMVC 308
Query: 330 QGVSRLISGDFYE 342
+ IS DF E
Sbjct: 309 HVMKGEISKDFVE 321
>sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis
thaliana GN=At2g30650 PE=2 SV=1
Length = 378
Score = 295 bits (755), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/322 (46%), Positives = 213/322 (66%), Gaps = 4/322 (1%)
Query: 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCA 89
+QVLVE K++ R+ NRP LNAL+ +M ++L +LF A+E DP++ G GRAF A
Sbjct: 5 SQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSA 64
Query: 90 GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 149
GGDI + + QGKL +F+ Y+ Y+L T+ KP V+ILNG+ MGGGAG+S G
Sbjct: 65 GGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGR 124
Query: 150 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 209
FR+A TVFA PET +G PD GAS++LS LPG GE++ LTGA+L+GAEM+ACGLATH
Sbjct: 125 FRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 184
Query: 210 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 269
+ S L +E EL K+ + + + I L+ Y++ + +++S HR+D++D+CF TVE
Sbjct: 185 FVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVE 244
Query: 270 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSL 329
EI +LE E + + W +T++ L++ASP LK+SLRSIREGR Q +CL+REYRM
Sbjct: 245 EIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVC 304
Query: 330 QGVSRLISGDFYEVSNFQILNK 351
+ IS DF E +++K
Sbjct: 305 HVMKGDISKDFVEGCRAVLIDK 326
>sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis
thaliana GN=At1g06550 PE=2 SV=2
Length = 387
Score = 258 bits (658), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 195/311 (62%), Gaps = 6/311 (1%)
Query: 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGG 91
V+ E K + R+ LNRP LN ++ + KL + + WE D G+GRAF AGG
Sbjct: 13 VIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFSAGG 72
Query: 92 DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 151
D+ YH Q + C + +Y Y + T+ K V+++NG++MGGGA + +P F
Sbjct: 73 DLKVFYH--GQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFS 130
Query: 152 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 211
V KTVFATPE GFH D G S+ S LPGHLGEFLALTGA+LNG E++A G+ATH+
Sbjct: 131 VVTEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELVAIGMATHFV 190
Query: 212 VSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 271
S KL +E L L + D V+++ +E++S+ V DK+S++++ ++++CF ++V++I
Sbjct: 191 PSGKLMDLEARLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINECFSKESVKQI 250
Query: 272 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQG 331
I + E+EAS + W ++ LK +SP LK+ L+SIREGR QT +CL +E+R++L
Sbjct: 251 IQAFEAEASKDGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQTLSDCLKKEFRLTLNI 310
Query: 332 VSRLISGDFYE 342
+ + IS D YE
Sbjct: 311 LRKTISPDMYE 321
>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens
GN=HIBCH PE=1 SV=2
Length = 386
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 185/329 (56%), Gaps = 16/329 (4%)
Query: 22 HRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--- 78
H S D +VL+E K + + LNRP LNAL NM ++ K WE DP
Sbjct: 24 HHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFL 83
Query: 79 --IGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 136
I G+AFCAGGDI + + K + FFR Y +G+ KP+VA+++G+
Sbjct: 84 IIIKGAGGKAFCAGGDIRVISE-AEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGI 142
Query: 137 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL 196
TMGGG G+S+ G FRVA K +FA PET IG PD G ++L L G LG FLALTG +L
Sbjct: 143 TMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRL 202
Query: 197 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY--SDLVYPDKNSVIH 254
G ++ G+ATH+ SEKL ++EE+L L + I + LE Y + DK+ ++
Sbjct: 203 KGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILE 262
Query: 255 R-IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGR 313
+D ++ CF +TVEEII++L+ + S + L+++ + SP SLK++LR + EG
Sbjct: 263 EHMDKINSCFSANTVEEIIENLQQDGS----SFALEQLKVINKMSPTSLKITLRQLMEGS 318
Query: 314 FQTFDECLVREYRMSLQGVSRLISGDFYE 342
+T E L EYR+S Q R DF+E
Sbjct: 319 SKTLQEVLTMEYRLS-QACMR--GHDFHE 344
>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus
GN=Hibch PE=1 SV=1
Length = 385
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 183/324 (56%), Gaps = 15/324 (4%)
Query: 13 FNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKA 72
F + QH S T+ +VL+E + + LNRP LNAL+ NM ++ K
Sbjct: 16 FRRASVILQHLRMSMHTE--AAEVLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKT 73
Query: 73 WENDPN-----IGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK 127
WE DP+ I G+AFCAGGDI +L + + +D FR Y + + K
Sbjct: 74 WEQDPDTFLIIIKGAGGKAFCAGGDIKALSE-AKKARQNLTQDLFREEYILNNAIASCQK 132
Query: 128 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 187
P+VA+++G+TMGGG G+S+ G FRVA +++FA PET IG PD G ++L L G LG
Sbjct: 133 PYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGY 192
Query: 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP 247
FLALTG +L G ++ G+ATH+ SEKL ++EEEL L + + LE Y
Sbjct: 193 FLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEELLALKSPSAEDVAGVLESYHAKSKM 252
Query: 248 DKNSVI---HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKV 304
D++ I +D ++ CF +TVE+II++L + S P+ ++++ + SP SLK+
Sbjct: 253 DQDKSIIFEEHMDKINSCFSANTVEQIIENLRQDGS----PFAIEQMKVINKMSPTSLKI 308
Query: 305 SLRSIREGRFQTFDECLVREYRMS 328
+LR + EG +T E L+ EYR++
Sbjct: 309 TLRQLMEGSSKTLQEVLIMEYRIT 332
>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus
norvegicus GN=Hibch PE=1 SV=2
Length = 385
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 189/329 (57%), Gaps = 17/329 (5%)
Query: 10 SRYFNDLRA--LSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLN 67
SR+ + RA + QH S T+ +VL+E + + + LNRP LNAL+ NM ++
Sbjct: 11 SRFSSIRRASVILQHLRMSKHTE--TAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIY 68
Query: 68 KLFKAWENDPN-----IGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 122
K WE DP+ I G+AFCAGGDI +L G+ +D FR Y +
Sbjct: 69 PQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQ-TLSQDLFREEYILNNAI 127
Query: 123 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 182
+ KP+VA+++G+TMGGG G+S+ G FRVA +++FA PET IG PD G ++L L
Sbjct: 128 ASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQ 187
Query: 183 GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY- 241
G LG FLALTG +L G ++ G+ATH+ SEKL ++EEEL L + + LE Y
Sbjct: 188 GKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYH 247
Query: 242 -SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASP 299
+ DK+ + +D ++ CF +TVE+I+++L + S P+ ++++ + SP
Sbjct: 248 AKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENLRQDGS----PFAMEQIKVINKMSP 303
Query: 300 LSLKVSLRSIREGRFQTFDECLVREYRMS 328
SLK++LR + EG +T E L EYR++
Sbjct: 304 TSLKITLRQLMEGSTKTLQEVLTMEYRLT 332
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus
GN=HIBCH PE=2 SV=1
Length = 385
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 186/338 (55%), Gaps = 17/338 (5%)
Query: 13 FNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKA 72
FN L+ + QH + TD + VL++ + + + LNRP LNAL+ M ++ KA
Sbjct: 15 FNRLQVILQHLKTCKHTDSAAD-VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKA 73
Query: 73 WENDPN----IGFGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK 127
WE DP I G+G +AFCAGGD+ ++ G +D+FR Y +GT K
Sbjct: 74 WEQDPETFLIIIKGTGEKAFCAGGDVRAIADAGKAGD-TMTRDYFREEYRLDNAIGTCKK 132
Query: 128 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 187
P+VA+++G+TMGGG G+S+ G FRVA KTVFA PET IG PD G ++L L G +G
Sbjct: 133 PYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKIGH 192
Query: 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP 247
LALTG +L G +++ G+ATH+ S KLP +E++L L + I L Y
Sbjct: 193 LLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALKSPSKENIADLLNSYHMQTKI 252
Query: 248 DKNS---VIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKV 304
D+ + ++ ++ F +++EEI+ L+ + S P+ L + + SP SLK+
Sbjct: 253 DQEKEFVLDEHMERINSIFSANSMEEIVQKLKQDGS----PFATKQLEAINKMSPTSLKL 308
Query: 305 SLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 342
+LR +REG + + EYR+S Q R DFYE
Sbjct: 309 TLRQLREGATMSLQDVFTMEYRLS-QACMR--GHDFYE 343
>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis
GN=hibch PE=2 SV=1
Length = 385
Score = 207 bits (528), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 196/353 (55%), Gaps = 25/353 (7%)
Query: 11 RYFNDLRALSQH--RTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNK 68
+ F L+ + QH ++ +V D C L+ + + LNRP ALNALN M ++
Sbjct: 13 KVFGRLQVIRQHLRMSNHTVKDGGC---LLTKAGCAGVITLNRPKALNALNLGMIRQIYP 69
Query: 69 LFKAWENDPN-----IGFGSGRAFCAGGDIVSLYHFMNQGKLEE--CKDFFRTLYSFIYL 121
K WE DP I G+AFCAGGDI ++ + GK+ + +DFFR Y
Sbjct: 70 QLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAV---TDAGKVGDRLAQDFFREEYILNNA 126
Query: 122 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 181
+GT KP+VA+++G+TMGGG G+S+ G FRVA KT+FA PET IG PD G ++L L
Sbjct: 127 IGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPRL 186
Query: 182 PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 241
G LG +LALTG +L G+++ G+ATH+ SEKL +E++L + + + L+ Y
Sbjct: 187 TGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKLSSLEQDLVAMKSPSKENVADVLDSY 246
Query: 242 SDLVYP--DKNSVI-HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEAS 298
Y DK V+ +D ++ F +TVEEI+++L+ + S + L+ L S
Sbjct: 247 QKKSYAAQDKPFVLAENMDKINSLFSGNTVEEIMENLKCDGS----SFAMKQLQTLSTMS 302
Query: 299 PLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 351
P SLK++ R ++EG + E L EYR+S ++ DFYE +++K
Sbjct: 303 PTSLKITFRQLKEGASMSLQEVLTMEYRLSQACMN---GHDFYEGVRAVLIDK 352
>sp|Q28FR6|HIBCH_XENTR 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus
tropicalis GN=hibch PE=2 SV=1
Length = 385
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 192/356 (53%), Gaps = 29/356 (8%)
Query: 11 RYFNDLRALSQH--RTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNK 68
+ F L+ + QH T+ +V D C L+ + + LNRP ALNALN M +
Sbjct: 13 KVFGRLQVIRQHLRMTNHTVKDGEC---LLTKAGCAGVITLNRPKALNALNLGMIRLIYP 69
Query: 69 LFKAWENDPNI------GFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 122
WE DP G G G+AFCAGGDI ++ G +DFFR Y +
Sbjct: 70 QLGLWEEDPETYLVIIKGVG-GKAFCAGGDIRAVTDAGKAGD-RLAQDFFREEYILNNAI 127
Query: 123 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 182
GT+ KP+VA+++G+TMGGG G+S+ G FRVA T+FA PET IG PD G ++L LP
Sbjct: 128 GTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLP 187
Query: 183 GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYS 242
G LG +LALTG +L G+++ G+ATH+ SEK+P +E++L + + L+ Y
Sbjct: 188 GKLGLYLALTGFRLKGSDVQKAGIATHFVESEKIPSLEQDLVAMKCPSKENVADVLDSYH 247
Query: 243 DLVYP--DKNSVI-HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASP 299
+ Y DK V+ +D ++ F +VE II++L + S + L+ L SP
Sbjct: 248 NKSYAAQDKPFVLAEHLDKINSLFSASSVEAIIENLRCDGS----SFALKQLQTLSTMSP 303
Query: 300 LSLKVSLRSIREGRFQTFDECLVREYRMS---LQGVSRLISGDFYEVSNFQILNKH 352
SLK++ R ++EG + E L EYR+S ++G DFYE +++K+
Sbjct: 304 TSLKITFRQLKEGSSMSLQEVLTMEYRLSQACMKGY------DFYEGVRAVLIDKN 353
>sp|Q58EB4|HIBCH_DANRE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio
GN=hibch PE=2 SV=1
Length = 382
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 175/317 (55%), Gaps = 16/317 (5%)
Query: 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFC 88
++VL E + + LNRP ALNAL NM + K W+ D G+G +AFC
Sbjct: 32 SEVLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFC 91
Query: 89 AGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG 148
AGGDI ++ G L + FFR Y +GT+ KP+VA++NG+TMGGG G+S+ G
Sbjct: 92 AGGDIRAIAEAGKAGNLL-SQVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHG 150
Query: 149 TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT 208
FRVA KT+FA PET IG PD G ++L L G LG FLALTG +L G ++ G+AT
Sbjct: 151 QFRVATEKTLFAMPETGIGLFPDVGGGYFLPRLQGKLGLFLALTGFRLKGRDVQRVGVAT 210
Query: 209 HYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS---VIHRIDIVDKCFGL 265
H+ SEK+ +E++L L + S + L+ Y + + D + + + +D+ F
Sbjct: 211 HFVQSEKIESLEKDLVDLKSPSISDVAQLLDSYQEQSHLDAEKPFVLQEQTEAIDRLFSA 270
Query: 266 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREY 325
+VEEI+++L+ + S + L + SP SLK++ R I EG + E + EY
Sbjct: 271 GSVEEIVENLKKDGS----AFALKQAETLAKMSPTSLKLTFRQIEEGARMSLQEVFMMEY 326
Query: 326 RMSLQGVSRLISGDFYE 342
R+S ++ DFYE
Sbjct: 327 RLSQACMN---GHDFYE 340
>sp|Q55GS6|HIBCH_DICDI 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium
discoideum GN=hibch PE=3 SV=1
Length = 381
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 173/321 (53%), Gaps = 19/321 (5%)
Query: 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN-----IGFGSG-RAFC 88
+VL E K +LNRP ALNALN NM L + + + + G+G +AFC
Sbjct: 24 EVLFEKKGKCLKVLLNRPKALNALNPNMVKILTPKYLEMKTKKDGEGVIVMKGAGEKAFC 83
Query: 89 AGGDIVSLYHF--MNQGKLEECKD----FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGA 142
AGGDI ++Y + +N+ + + D FFR Y L+GT+ V+I NG MGGG
Sbjct: 84 AGGDIRAIYDYKQLNEEQKSKTNDIGDLFFREEYILNNLIGTNPIAQVSIYNGFAMGGGI 143
Query: 143 GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMM 202
G+S+ G FRVA TVFA PET IGF D G S++L LP + G +LALTG+KL G +
Sbjct: 144 GLSVHGKFRVATENTVFAMPETGIGFFCDVGGSYFLPRLPNNYGMYLALTGSKLKGNNVY 203
Query: 203 ACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 262
G+ATH+ +E + +E+E+ + I + L KY D N + +++
Sbjct: 204 LAGVATHFVSNEHIQALEKEIEECENPTSQTINSILTKYHDKSKSTSNEYNDNLGDIERI 263
Query: 263 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG-RFQTFDECL 321
FG ++V+EI + LE L N W TL+ LK SP SL V +++G + + +CL
Sbjct: 264 FGKNSVKEIFEQLE---LLENSEWAKQTLKTLKSVSPSSLMVVFEQMKQGAKLPSLAKCL 320
Query: 322 VREYRMSLQGVSRLISGDFYE 342
E+R+S + + DF+E
Sbjct: 321 EMEFRISQHFLEK---PDFFE 338
>sp|Q2HJ73|HIBCH_BOVIN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus
GN=HIBCH PE=2 SV=1
Length = 386
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 181/316 (57%), Gaps = 14/316 (4%)
Query: 21 QHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN-- 78
QH S+ TD +VL+E K + + LNRP LN L M ++ K WE DP
Sbjct: 24 QHLKMSNHTD-AAAEVLLERKGCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTF 82
Query: 79 --IGFGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 135
I G+G +AFCAGGDI +L N + + +D FR Y + + KP++A+++G
Sbjct: 83 LIIIKGAGEKAFCAGGDIRALSEARNTNQ-KMLQDLFREEYILNNAIDSCQKPYIALIHG 141
Query: 136 VTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAK 195
+TMGGG GVS+ G FRVA K+VFA PET IG PD G ++L L G LG FLALTG +
Sbjct: 142 ITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFR 201
Query: 196 LNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS---V 252
L G ++ G+ATH+ EKL ++EE+L L + I LE Y D++ +
Sbjct: 202 LKGRDVYTAGIATHFVDFEKLGMLEEDLLALKSPSKENIADVLETYHAKSKTDQDKPFIL 261
Query: 253 IHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 312
+D ++ F +TVE+I+D+L+ + S + L+++K+ SP SLK++LR + EG
Sbjct: 262 EEHMDKINSWFSANTVEQIVDNLQQDGS----SFALEQLKVIKKMSPTSLKITLRQLMEG 317
Query: 313 RFQTFDECLVREYRMS 328
+T E L+ EYR+S
Sbjct: 318 SSKTLPEVLIMEYRLS 333
>sp|O74802|HIBCH_SCHPO 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ehd3 PE=3 SV=1
Length = 429
Score = 178 bits (451), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 187/352 (53%), Gaps = 18/352 (5%)
Query: 7 SNISRYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNM-GAK 65
S +SR F +R + TSS+ T VL E K +R+ LNRP LNA+N +M +
Sbjct: 37 STMSRAF--IRNPKFYSTSSNDT------VLYESKNGARIFTLNRPKVLNAINVDMIDSI 88
Query: 66 LNKLFKAWENDPN---IGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 122
L KL E++ I G+GR+F +GGDI + + GKL E + F Y + L
Sbjct: 89 LPKLVSLEESNLAKVIILKGNGRSFSSGGDIKAAALSIQDGKLPEVRHAFAQEYRLSHTL 148
Query: 123 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 182
T+ KP VA++NG+TMGGG+G+++ FR+AC T+FA PET IG+ D ASF+ S LP
Sbjct: 149 ATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYFTDVAASFFFSRLP 208
Query: 183 GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYS 242
G+ G +L LT + G + + G+ATH+ P +E+ L +L T D S I + +++
Sbjct: 209 GYFGTYLGLTSQIVKGYDCLRTGIATHFVPKHMFPHLEDRLAELNTSDISKINNTILEFA 268
Query: 243 DLVYPDKNSVIHRI-DIVDKCFGLDTVEEIIDSLESEASLIN--DPWCGSTLRLLKEASP 299
+ + + D+++KCF + +II +L+ AS + + ST++ L SP
Sbjct: 269 EFASSSPPTFTPDVMDVINKCFCKNDTVDIIRALKEYASNTSALAEFAKSTVKTLYSKSP 328
Query: 300 LSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 351
S+ V+ R I+ + E ++ +S L DF E N Q++ K
Sbjct: 329 TSIAVTNRLIKSAAKWSISEAFYYDHIVSYY---MLKQPDFVEGVNAQLITK 377
>sp|P28817|HIBCH_YEAST 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EHD3 PE=1
SV=2
Length = 500
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 170/348 (48%), Gaps = 34/348 (9%)
Query: 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF------GSGRAFCA 89
VL + +R+ LNRP LNALN M + K + R+FCA
Sbjct: 39 VLFTVQDTARVITLNRPKKLNALNAEMSESMFKTLNEYAKSDTTNLVILKSSNRPRSFCA 98
Query: 90 GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 149
GGD+ ++ F + + FF YS + + T+LKP V ++G+TMGGG G+SI
Sbjct: 99 GGDVATVAIFNFNKEFAKSIKFFTDEYSLNFQIATYLKPIVTFMDGITMGGGVGLSIHTP 158
Query: 150 FRVACGKTVFATPETLIGFHPDAGASFYLSHL------PGHLGEFLALTGAKLNGAEMMA 203
FR+A T +A PE IGF PD G++F L + + +L LTG + GA+
Sbjct: 159 FRIATENTKWAMPEMDIGFFPDVGSTFALPRIVTLANSNSQMALYLCLTGEVVTGADAYM 218
Query: 204 CGLATHYSVSEKLPLIEEELGKL---VTDDPS------VIEACLEKY-----SDLVYPDK 249
GLA+HY SE L +++ LG++ +DP ++ ++++ D V+
Sbjct: 219 LGLASHYVSSENLDALQKRLGEISPPFNNDPQSAYFFGMVNESIDEFVSPLPKDYVFKYS 278
Query: 250 NSVIHRIDIVDKCFGLD---TVEEIIDSL-ESEASLINDPWCGSTLRLLKEASPLSLKVS 305
N ++++++ CF L T+E+I+++L + E S + L SP SL+++
Sbjct: 279 N---EKLNVIEACFNLSKNGTIEDIMNNLRQYEGSAEGKAFAQEIKTKLLTKSPSSLQIA 335
Query: 306 LRSIREGRFQTFDECLVRE-YRMSLQGVSRLISGDFYEVSNFQILNKH 352
LR ++E + + R+ Y + +++ +F E + ++++K
Sbjct: 336 LRLVQENSRDHIESAIKRDLYTAANMCMNQDSLVEFSEATKHKLIDKQ 383
>sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial
OS=Arabidopsis thaliana GN=At4g13360 PE=1 SV=2
Length = 421
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 186/366 (50%), Gaps = 43/366 (11%)
Query: 10 SRYFNDLR-ALSQHRTSSS-----VTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMG 63
S++ LR ++S R S+ V D + V G A + L+R ALNA+N +M
Sbjct: 22 SQFHQTLRFSISDRRKFSAMAGAGVDDFVKGNVFPNGVA---LITLDRTKALNAMNLDMD 78
Query: 64 AKLNKLFKAWENDPNIGF-----GSGRAFCAGGDIVSLYHFMNQGK-LEECKDFFRTLYS 117
K WE+DP + + RAFCAG DI + + + K + F Y+
Sbjct: 79 IKYKSFLDEWESDPRVKCVIVEGSTSRAFCAGMDIKGVAAEIQKDKNTPLVQKVFTAEYT 138
Query: 118 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFY 177
I + + KP++++++G+TMG G G+S G +RV +TV A PE IG PD G S+
Sbjct: 139 LICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLFPDVGFSYI 198
Query: 178 LSHLP--GHLGEFLALTGAKLNG-AEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSV 233
+H P G +G +L LTG +++ ++ + GL THY SEKL ++E L +++DP+
Sbjct: 199 AAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYVPSEKLASLKEAILSANLSEDPNQ 258
Query: 234 -IEACLEKYSDLVYPDKNSVIHR-IDIVDKCFGLD-TVEEIIDSLE-----SEASLINDP 285
I+A L KYS P+ + + + ++ F + +++E I+ L+ +E+S++
Sbjct: 259 DIQATLSKYSS--NPESEAHLKSLLPHIESAFSSNKSIKETIEELKKYQQSTESSVVE-- 314
Query: 286 WCGSTLRLLKEASPLSLKVS---------LRSIREGRFQTFDECLVREYRMSLQGVSRLI 336
W L+ L++ +P SL ++ +S E T + + EYR++L+ R
Sbjct: 315 WANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELATLNGVMKTEYRIALRSALR-- 372
Query: 337 SGDFYE 342
GDF E
Sbjct: 373 -GDFAE 377
>sp|Q9LK08|HIBC7_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial
OS=Arabidopsis thaliana GN=At3g24360 PE=2 SV=1
Length = 418
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 160/321 (49%), Gaps = 34/321 (10%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF-----GSGRAFCAGGDIVSLY-HFMNQ 102
L+RP ALNA+N M K L WE DP + + RAFCAG DI + +
Sbjct: 61 LDRPKALNAMNLEMDLKYKSLLDEWEYDPGVKCVVVEGSTSRAFCAGMDIKGVVAEILMD 120
Query: 103 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 162
+ F YS I + + KP++++++G+TMG G G+S G +RV +TV A P
Sbjct: 121 KNTSLVQKVFTAEYSLICKIAGYRKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMP 180
Query: 163 ETLIGFHPDAGASFYLSHLPGH--LGEFLALTGAKLNG-AEMMACGLATHYSVSEKLPLI 219
E IG PD G S+ +H PG +G +L +TG +++ ++ + GL THY S KL +
Sbjct: 181 ENGIGLFPDVGFSYIAAHSPGEGSVGAYLGMTGRRISTPSDALFVGLGTHYVPSGKLGSL 240
Query: 220 EEEL--GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR-IDIVDKCFGLD-TVEEIIDSL 275
E + L D I+A L YS P+ S + + ++ F + +V+E I+ L
Sbjct: 241 REAILSADLSKDPQQHIQATLSNYSS--DPETESHLQMLLPQIESAFSVSKSVKETIEEL 298
Query: 276 E-----SEASLINDPWCGSTLRLLKEASPLSLKVSLR-----SIREGR----FQTFDECL 321
+ SEAS+ W ++ +++ +P SL ++ + + +G+ T + +
Sbjct: 299 KKFQQSSEASVAE--WANEAVQGIEKGAPFSLYLTHKYFSKVACAKGKTNNAMATLNGVM 356
Query: 322 VREYRMSLQGVSRLISGDFYE 342
+ EYR++L+ R DF E
Sbjct: 357 ITEYRIALRSALR---SDFTE 374
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGK 104
LNRP LNALN + +L++ E+DP I G G+AFCAG DI NQ
Sbjct: 19 LNRPDKLNALNAKLLEELDRAVSQAESDPEIRVIIITGKGKAFCAGADITQF----NQLT 74
Query: 105 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 164
E F + + + KP +A++NG +GGG +++ R+A + PE
Sbjct: 75 PAEAWKFSKKGREIMDKIEALSKPTIAMINGYALGGGLELALACDIRIAAEEAQLGLPEI 134
Query: 165 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPL--IEE 221
+G +P G + L+ + G + +TG ++ G + GL V+ +PL +E+
Sbjct: 135 NLGIYPGYGGTQRLTRVIGKGRALEMMMTGDRIPGKDAEKYGL-----VNRVVPLANLEQ 189
Query: 222 ELGKLV 227
E KL
Sbjct: 190 ETRKLA 195
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 40 GKANSRMAI-LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIV 94
GK N+ I LNRP ALNAL + +LN+ K +E DP +G G +AF AG DI
Sbjct: 42 GKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIK 101
Query: 95 SLYHFMNQGKLEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGT 149
+ + F+ YS +L L KP +A +NG GGG +++
Sbjct: 102 EMQNLS-----------FQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCD 150
Query: 150 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLAT 208
A K FA PE LIG P AG + L+ G L + LTG +++ + GL +
Sbjct: 151 IIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVS 210
Query: 209 HYSVSEKLPLIEEEL 223
E L+EE +
Sbjct: 211 KICPVET--LVEEAI 223
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 40 GKANSRMAI-LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIV 94
GK N+ I LNRP ALNAL + +LN+ K +E DP +G G +AF AG DI
Sbjct: 42 GKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIK 101
Query: 95 SLYHFMNQGKLEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGT 149
+ + F+ YS +L L KP +A +NG GGG +++
Sbjct: 102 EMQNLS-----------FQDCYSSKFLKHWDHLTQIKKPVIAAVNGYAFGGGCELAMMCD 150
Query: 150 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLAT 208
A K FA PE LIG P AG + L+ G L + LTG +++ + GL +
Sbjct: 151 IIYAGEKAQFAQPEILIGTIPGAGGTQRLTRTVGKSLAMEMVLTGDRISAQDAKQAGLVS 210
Query: 209 HYSVSEKLPLIEEEL 223
E L+EE +
Sbjct: 211 KICPVET--LVEEAI 223
>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021)
GN=fadB1 PE=3 SV=2
Length = 257
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 13/194 (6%)
Query: 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG----FGSGRAFCAGG 91
+LVE + + LNRP ALNALN + +L+ KA++ D +G GS +AF AG
Sbjct: 6 LLVETQGRVGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKAFAAGA 65
Query: 92 DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 151
DI + QG L+ + + KP +A ++G +GGG +++ F
Sbjct: 66 DIKEM-----QG-LDFVDGYLADFLGGWEHVANARKPMIAAVSGFALGGGCELAMMCDFI 119
Query: 152 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHY 210
+A F PE +G P G S L+ G L LTG ++ AE GL +
Sbjct: 120 IASETAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLILTGRMMDAAEAERSGLVSRV 179
Query: 211 SVSEKLPLIEEELG 224
++ L+EE LG
Sbjct: 180 VAPDR--LLEEALG 191
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGK 104
LNRP ALNAL + +LN+ + +E DP +G G +AF AG DI + +
Sbjct: 52 LNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLTGGDKAFAAGADIKEMQNRT---- 107
Query: 105 LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 159
F+ YS +L + KP +A +NG +GGG +++ A K F
Sbjct: 108 -------FQDCYSSKFLSHWDHITRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 160
Query: 160 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL 218
PE L+G P AG + L+ G L + LTG +++ + GL + EK L
Sbjct: 161 GQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVEK--L 218
Query: 219 IEEEL 223
+EE +
Sbjct: 219 VEEAI 223
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 11/209 (5%)
Query: 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN----IGFGSG-RAFC 88
N V++E + + +NRP ALNALN++ +++ + END I G+G ++F
Sbjct: 4 NNVILEKEGKVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFV 63
Query: 89 AGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG 148
AG DI + MN + + ++ + LL KP +A +NG +GGG +++
Sbjct: 64 AGADISEMKE-MNTIEGRKFGILGNKVFRRLELLE---KPVIAAVNGFALGGGCEIAMSC 119
Query: 149 TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLA 207
R+A F PE +G P G + LS L G + + L T + E + GL
Sbjct: 120 DIRIASSNARFGQPEVGLGITPGFGGTQRLSRLVGMGMAKQLIFTAQNIKADEALRIGLV 179
Query: 208 TH-YSVSEKLPLIEEELGKLVTDDPSVIE 235
SE + +E K+V++ P ++
Sbjct: 180 NKVVEPSELMNTAKEIANKIVSNAPVAVK 208
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGK 104
LNRP ALNAL + +LN+ +A+E DP +G G + F AG DI +
Sbjct: 52 LNRPKALNALCNGLIVELNQALQAFEEDPAVGAIVLTGGEKVFAAGADIKEMQSLT---- 107
Query: 105 LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 159
F+ YS +L L KP +A +NG +GGG +++ A K F
Sbjct: 108 -------FQNCYSGGFLSHWDQLTRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 160
Query: 160 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATH 209
PE LIG P AG + L+ G L + LTG +++ + GL +
Sbjct: 161 GQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSK 211
>sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain
TN) GN=echA8 PE=3 SV=1
Length = 257
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 11/188 (5%)
Query: 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG----FGSGRAFCA 89
+ +LV+G + LNRP ALNALN+ M ++ K + DP++G GS + F A
Sbjct: 4 DTILVDGYQRVGIITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGSPKVFAA 63
Query: 90 GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 149
G DI + + DFF S L P +A + G +GGG +++
Sbjct: 64 GADIKEMASLTFTDAFD--ADFF----SAWGKLAAVRTPMIAAVAGYALGGGCELAMMCD 117
Query: 150 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLAT 208
+A F PE +G P G S L+ G L LTG ++ AE GL +
Sbjct: 118 LLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTIDAAEAERSGLVS 177
Query: 209 HYSVSEKL 216
+++ L
Sbjct: 178 RVVLADDL 185
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 43 NSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIG----FGSG-RAFCAGGDIVS 95
N MA+ LNRP A NAL+ M L + + E + NI G+G +AFCAG D+
Sbjct: 11 NEHMALITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGADLKE 70
Query: 96 LYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG 155
LE RT LL +P +A +NG +GGG +++ R+A
Sbjct: 71 RIKLKEDQVLESVSLIQRT----AALLDALPQPVIAAINGSALGGGLELALACDLRIATE 126
Query: 156 KTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVS 213
V PET + P AG + L L G EF+ TG ++ E GL H +
Sbjct: 127 AAVLGLPETGLAIIPGAGGTQRLPRLIGRGKAKEFI-YTGRRVTAHEAKEIGLVEHVTAP 185
Query: 214 -EKLPLIEEELGKLVTDDPSVI 234
+ +P EE + + P +
Sbjct: 186 CDLMPKAEELAAAISANGPIAV 207
>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis
GN=echA8 PE=1 SV=1
Length = 257
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG----FGSGRAFCAGG 91
+LVE + LNRP ALNALN+ + ++ ++DP+IG GS +AF AG
Sbjct: 6 ILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGA 65
Query: 92 DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 151
DI + DFF T L P +A + G +GGG +++
Sbjct: 66 DIKEMADLTFADAF--TADFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVL 119
Query: 152 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHY 210
+A F PE +G P G S L+ G L LTG ++ AE GL +
Sbjct: 120 IAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 179
Query: 211 SVSEKL 216
++ L
Sbjct: 180 VPADDL 185
>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1
Length = 257
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG----FGSGRAFCAGG 91
+LVE + LNRP ALNALN+ + ++ ++DP+IG GS +AF AG
Sbjct: 6 ILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGA 65
Query: 92 DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 151
DI + DFF T L P +A + G +GGG +++
Sbjct: 66 DIKEMADLTFADAF--TADFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVL 119
Query: 152 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHY 210
+A F PE +G P G S L+ G L LTG ++ AE GL +
Sbjct: 120 IAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 179
Query: 211 SVSEKL 216
++ L
Sbjct: 180 VPADDL 185
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 29/188 (15%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGK 104
LNRP ALNAL + +LN+ + +E DP +G G +AF AG DI + +
Sbjct: 52 LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 107
Query: 105 LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 159
F+ YS +L + KP +A +NG +GGG +++ A K F
Sbjct: 108 -------FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 160
Query: 160 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLP- 217
PE L+G P AG + L+ G L + LTG +++ + GL VS+ P
Sbjct: 161 GQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL-----VSKIFPV 215
Query: 218 --LIEEEL 223
L+EE +
Sbjct: 216 ETLVEEAI 223
>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=echs1 PE=3 SV=1
Length = 277
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 38 VEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG----FGSGRAFCAGGDI 93
E K + LNRP +LNAL+ + +++N K ++ D ++G GS +AF AG DI
Sbjct: 28 TEKKGRVGLVTLNRPKSLNALSDGLISEINSAVKLFQEDKDVGSIIITGSEKAFAAGADI 87
Query: 94 -----VSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG 148
V+L N L + D + KP +A +NG +GGG +++
Sbjct: 88 KEMEKVTLPDAYNNDLLAQWHDLTKIR-----------KPIIAAVNGYALGGGCELAMMC 136
Query: 149 TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLA 207
+A K VF PE +G P G + L G L LTG L E GL
Sbjct: 137 DIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLV 196
Query: 208 THYSVSEKL 216
+ E+L
Sbjct: 197 SKVVPVEEL 205
>sp|Q869N6|CRTL_DICDI 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial
OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1
Length = 299
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 9 ISRYF--NDLRALSQHRTSSSVTDD-----LCNQVLVEGKANS-RMAILNRPSALNALNT 60
I+R F N+++ S+ +SS+ + L + LV GK ++ LN+P LNAL
Sbjct: 2 INRLFSINNIKNGSKFFSSSTTVETKQPLVLLEKHLVNGKYTGIQIVKLNKPKQLNALTF 61
Query: 61 NMGAKLNKLFKAWENDPNIG----FGSGRAFCAGGDIVSLYHFM------NQGKLEECKD 110
MG K+ D ++ G G+AF AGGD+ L NQ +E
Sbjct: 62 EMGVDYKKVVDTLAEDKDLKCVVLTGEGKAFSAGGDLDFLIERTKDTPENNQRIMER--- 118
Query: 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 170
F+RT F+Y+ + P ++ +NG +G G +++ RV K T +G HP
Sbjct: 119 FYRT---FLYIRSLPV-PIISAINGAAIGAGFCLALATDIRVVSNKAPVGLTFTKLGIHP 174
Query: 171 DAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTD 229
G + ++++ G + ++ L+ + G E GL S+++ L + ++
Sbjct: 175 GMGVTHSITNIVGQDVASYMLLSSDIIKGDEAQRLGLVLKSVESDQVLPTALNLAETISK 234
Query: 230 DPSV-----IEACLEKY-SDLVYPDKNSVIHRIDIVDKCFG-LDTVEEIIDSLES 277
+ ++ + KY SDL DK S+ D +C+ D VE I+ ES
Sbjct: 235 NSTIAVNSTTKTLRNKYNSDL---DK-SLTREADAQSQCWASKDIVEGILAIRES 285
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQ 102
IL+RP A NA++ ++ ++F + +DP++ G+G R FCAG D+ + +
Sbjct: 17 ILDRPKA-NAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLKA----AAE 71
Query: 103 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 162
G+ + DF ++ + L KP +A +NG GGG +++ + FA P
Sbjct: 72 GEAPDA-DFGAGGFAGLTELFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFALP 130
Query: 163 ETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIE 220
E +G PD+G L LP + + +TG ++N E + G+A S +E +
Sbjct: 131 EAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMDSAR 190
Query: 221 EELGKLVTDDPSVIEACLEKY 241
E ++ P + A E Y
Sbjct: 191 ELADQIANSAPLAVAALKEIY 211
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQ 102
IL+RP A NA++ ++ ++F + +DP++ G+G R FCAG D+ + +
Sbjct: 17 ILDRPKA-NAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLKA----AAE 71
Query: 103 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 162
G+ + DF ++ + L KP +A +NG GGG +++ + FA P
Sbjct: 72 GEAPDA-DFGAGGFAGLTELFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFALP 130
Query: 163 ETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIE 220
E +G PD+G L LP + + +TG ++N E + G+A S +E +
Sbjct: 131 EAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMDSAR 190
Query: 221 EELGKLVTDDPSVIEACLEKY 241
E ++ P + A E Y
Sbjct: 191 ELADQIANSAPLAVAALKEIY 211
>sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Bos taurus GN=ECHDC2 PE=2 SV=1
Length = 296
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIG---FGSG--RAFCAGGDIVSLYHFMNQ 102
++NRPSA NAL ++L + D + F SG FCAG D+ Q
Sbjct: 50 LMNRPSARNALGNVFVSQLLEALAQLREDRQVRVLIFRSGVKGVFCAGADLKE----REQ 105
Query: 103 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 162
E F + L + + P +A ++G +GGG +++ RVA V
Sbjct: 106 MSEAEVGLFVQRLRGLMTEIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLI 165
Query: 163 ETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATH 209
ET G P AG + L G L + L TG +L+GA+ A GL H
Sbjct: 166 ETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGAQAQALGLVNH 213
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 12/206 (5%)
Query: 10 SRYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKL 69
S F+ R + H T+ T ++ Q L ++NRP+A NAL ++L +
Sbjct: 14 SWRFSGARDCASHATTR--TPEIQVQALTGPNQGITEILMNRPNARNALGNVFVSELLEA 71
Query: 70 FKAWENDPNIGFGSGRA-----FCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGT 124
D + R+ FCAG D+ + E F + L + +
Sbjct: 72 LAQLREDQQVRVLLFRSAVKGVFCAGADLKEREQMSDV----EVGTFVQRLRGLMSEIAA 127
Query: 125 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG- 183
P +A ++G +GGG +++ R+A V ET G P AG + L G
Sbjct: 128 FPVPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGV 187
Query: 184 HLGEFLALTGAKLNGAEMMACGLATH 209
L + L TG +LNGA+ GL H
Sbjct: 188 ALAKELIFTGRRLNGAQARELGLVNH 213
>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis
elegans GN=ech-6 PE=1 SV=1
Length = 288
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSL 96
K N + LNRP ALNAL + +L + + D ++G GS RAF AG DI +
Sbjct: 42 KQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERAFAAGADIKEM 101
Query: 97 YHFMNQGKLEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFR 151
+ + F T +S +L + KP +A +NG +GGG +++
Sbjct: 102 TN-----------NEFATTFSGSFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMCDII 150
Query: 152 VACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHY 210
A K F PE IG P AG + + G + LTG + E G+ +
Sbjct: 151 YAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKI 210
Query: 211 SVSEKLPLIEEELGKLVTDDPSVI 234
++++ +LG+ + D +I
Sbjct: 211 FPADQVVGEAVKLGEKIADQSPLI 234
>sp|P41942|YKB4_CAEEL Uncharacterized protein B0272.4 OS=Caenorhabditis elegans
GN=B0272.4 PE=3 SV=1
Length = 255
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF-----GSGRAFCAG 90
+L E K N LNRP NAL M L +F +D +I F G G+ +CAG
Sbjct: 6 ILTERKNNVLWVTLNRPKKFNALTRQMFLDLCTVFNDAADDDDIAFVVFTGGKGKYYCAG 65
Query: 91 GDIVSLYHFMNQGKLEECKDFFRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 149
D + +L D Y F+ +L KP +A++NG + G V++ G
Sbjct: 66 SD-------FSPAELSTLTDIQEHGYKLFVDILIAFPKPIIALVNGHAV--GVSVTMLGV 116
Query: 150 FR--VACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGL 206
+A FATP IG P+A +S+ L + GH L + K E GL
Sbjct: 117 MDAVIAIDTATFATPFADIGVCPEACSSYTLPRIMGHQKAAALMMFSEKFTAHEAHIAGL 176
Query: 207 ATH 209
T
Sbjct: 177 VTQ 179
>sp|Q86YB7|ECHD2_HUMAN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Homo sapiens GN=ECHDC2 PE=2 SV=2
Length = 292
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 10/168 (5%)
Query: 48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIG---FGSG--RAFCAGGDIVSLYHFMNQ 102
++NRPSA NAL ++L + D + F SG FCAG D+
Sbjct: 46 LMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEA 105
Query: 103 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 162
E F + L + + P +A ++G +GGG +++ RVA V
Sbjct: 106 ----EVGVFVQRLRGLMNDIAAFPAPTIAAMDGFALGGGLELALACDLRVAASSAVMGLI 161
Query: 163 ETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATH 209
ET G P AG + L G L + L TG +L+G E GL H
Sbjct: 162 ETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNH 209
>sp|A8ALR7|CAID_CITK8 Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1
Length = 261
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPN-----IGFGSGRAFCAGGDIVSLYHFMNQG 103
L+RP A NA++ ++ ++F + +DP I G + F AG D+ + +G
Sbjct: 18 LDRPKA-NAIDAKTSFEMGEVFLNFRDDPELRVAIITGGGEKFFSAGWDLKA----AAEG 72
Query: 104 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 163
+ + DF ++ + + KP +A +NG GGG +++ F V FA PE
Sbjct: 73 EAPDA-DFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPE 131
Query: 164 TLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 221
+G PD+G L L P + E L +TG +++ E + G+ + L
Sbjct: 132 AKLGIVPDSGGVLRLPKLLPPAIVNEML-MTGRRMDAEEALRWGIVNRVVSQQALMDSAR 190
Query: 222 ELG-KLVTDDPSVIEACLEKY 241
EL +LV P I A E Y
Sbjct: 191 ELAQQLVNSAPLAIAALKEIY 211
>sp|O69762|HCHL_PSEFL Hydroxycinnamoyl-CoA hydratase-lyase OS=Pseudomonas fluorescens
PE=1 SV=1
Length = 276
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 7/209 (3%)
Query: 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGG 91
V VE + ILNRP NA++ + ++ + + E DP G G+G A+ AG
Sbjct: 11 VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 92 DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 150
D+ + ++ G + R + + LL + KP +A++NG GGG +
Sbjct: 71 DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDL 130
Query: 151 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 209
+ + F E G P S ++ GH + +TG G + GL
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 210 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 237
+L + EL + L+ +P V+ A
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219
>sp|Q7MZ92|FADB_PHOLL Fatty acid oxidation complex subunit alpha OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=fadB PE=3
SV=1
Length = 728
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 10/176 (5%)
Query: 48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIG----FGSGRAFCAGGDIVSLYHFMNQG 103
+ N P+A+N L+T A L+K + E + AF G DI +
Sbjct: 21 VFNAPAAINKLDTKTVASLDKAIASLEQQTGLKGVLLRSEKTAFIVGADITEFLSLFDSP 80
Query: 104 --KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 161
KL+E +F ++++ I L P ++ +NG +GGG + FRVA
Sbjct: 81 VEKLQEWLNFSNSIFNRIEDLPV---PTISAINGYALGGGCECVLSTDFRVASPDIRIGL 137
Query: 162 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA-EMMACGLATHYSVSEKL 216
PET +G P G S L L G + K GA E + GL EKL
Sbjct: 138 PETKLGIMPGFGGSVRLPRLIGTDNALDIIAAGKDIGAEEALKNGLIDAVVPKEKL 193
>sp|O75521|ECI2_HUMAN Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2
PE=1 SV=4
Length = 394
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIG---FGSGRAFCAGGDIVSLYHFMNQGK 104
+ NRP NA+NT M ++ + KA D +I G+G + +G D+ + G
Sbjct: 154 MFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGV 213
Query: 105 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRV--ACGKTVFATP 162
E+ K+ L F+ KP +A++NG + G V++ G F A + F TP
Sbjct: 214 EEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAV--GISVTLLGLFDAVYASDRATFHTP 271
Query: 163 ETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH 209
+ +G P+ +S+ + P E L + G KL E A GL T
Sbjct: 272 FSHLGQSPEGCSSYTFPKIMSPAKATEML-IFGKKLTAGEACAQGLVTE 319
>sp|P59395|CAID_SHIFL Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2
Length = 261
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQG 103
L+RP A NA++ ++ ++F + +DP + G+G + F AG D+ + +G
Sbjct: 18 LDRPKA-NAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKA----AAEG 72
Query: 104 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 163
+ + DF ++ + + KP +A +NG GGG +++ F V FA PE
Sbjct: 73 EAPDA-DFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPE 131
Query: 164 TLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEE 221
+G PD+G L LP + + +TG ++ E + G+ S +E + E
Sbjct: 132 AKLGIVPDSGGVLRLPKILPPTIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARE 191
Query: 222 ELGKLVTDDPSVIEACLEKY 241
+LV P I A E Y
Sbjct: 192 LAQQLVNSAPLAIAALKEIY 211
>sp|B5RGA4|CAID_SALG2 Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91
/ NCTC 13346) GN=caiD PE=3 SV=1
Length = 261
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPN-----IGFGSGRAFCAGGDIVSLYHFMNQG 103
L+RP A NA++ + + F + +DP I G + F AG D+ + +G
Sbjct: 18 LDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKA----AAEG 72
Query: 104 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 163
+ + DF ++ + + KP +A +NG GGG +++ F V FA PE
Sbjct: 73 EAPDA-DFGSGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPE 131
Query: 164 TLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEE 221
+G PD+G L LP + + +TG +++ E + G+ S SE + E
Sbjct: 132 AKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARE 191
Query: 222 ELGKLVTDDPSVIEACLEKY 241
+LV P I A E Y
Sbjct: 192 LAQQLVNSAPLAIAALKEIY 211
>sp|B5R1Q9|CAID_SALEP Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiD PE=3 SV=1
Length = 261
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPN-----IGFGSGRAFCAGGDIVSLYHFMNQG 103
L+RP A NA++ + + F + +DP I G + F AG D+ + +G
Sbjct: 18 LDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKA----AAEG 72
Query: 104 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 163
+ + DF ++ + + KP +A +NG GGG +++ F V FA PE
Sbjct: 73 EAPDA-DFGSGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPE 131
Query: 164 TLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEE 221
+G PD+G L LP + + +TG +++ E + G+ S SE + E
Sbjct: 132 AKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDSARE 191
Query: 222 ELGKLVTDDPSVIEACLEKY 241
+LV P I A E Y
Sbjct: 192 LAQQLVNSAPLAIAALKEIY 211
>sp|P31551|CAID_ECOLI Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD
PE=1 SV=4
Length = 261
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQG 103
L+RP A NA++ ++ ++F + +DP + G+G + F AG D+ + +G
Sbjct: 18 LDRPKA-NAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKA----AAEG 72
Query: 104 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 163
+ + DF ++ + + KP +A +NG GGG +++ F V FA PE
Sbjct: 73 EAPDA-DFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPE 131
Query: 164 TLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEE 221
+G PD+G L LP + + +TG ++ E + G+ S +E + E
Sbjct: 132 AKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARE 191
Query: 222 ELGKLVTDDPSVIEACLEKY 241
+LV P I A E Y
Sbjct: 192 LAQQLVNSAPLAIAALKEIY 211
>sp|B1IRE0|CAID_ECOLC Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=caiD PE=3 SV=1
Length = 261
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQG 103
L+RP A NA++ ++ ++F + +DP + G+G + F AG D+ + +G
Sbjct: 18 LDRPKA-NAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKA----AAEG 72
Query: 104 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 163
+ + DF ++ + + KP +A +NG GGG +++ F V FA PE
Sbjct: 73 EAPDA-DFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPE 131
Query: 164 TLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEE 221
+G PD+G L LP + + +TG ++ E + G+ S +E + E
Sbjct: 132 AKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARE 191
Query: 222 ELGKLVTDDPSVIEACLEKY 241
+LV P I A E Y
Sbjct: 192 LAQQLVNSAPLAIAALKEIY 211
>sp|B1LFW9|CAID_ECOSM Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiD PE=3 SV=1
Length = 261
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQG 103
L+RP A NA++ ++ ++F + +DP + G+G + F AG D+ + +G
Sbjct: 18 LDRPKA-NAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKA----AAEG 72
Query: 104 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 163
+ + DF ++ + + KP +A +NG GGG +++ F V FA PE
Sbjct: 73 EAPDA-DFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPE 131
Query: 164 TLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEE 221
+G PD+G L LP + + +TG ++ E + G+ S +E + E
Sbjct: 132 AKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARE 191
Query: 222 ELGKLVTDDPSVIEACLEKY 241
+LV P I A E Y
Sbjct: 192 LAQQLVNSAPLAIAALKEIY 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,382,516
Number of Sequences: 539616
Number of extensions: 5739587
Number of successful extensions: 14557
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 14208
Number of HSP's gapped (non-prelim): 358
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)