Query 018632
Match_columns 353
No_of_seqs 210 out of 1883
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 02:43:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018632.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018632hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02157 3-hydroxyisobutyryl-C 100.0 1.1E-60 2.4E-65 460.0 34.9 321 33-353 36-360 (401)
2 PLN02851 3-hydroxyisobutyryl-C 100.0 2E-59 4.3E-64 451.1 34.4 323 31-353 39-365 (407)
3 PLN02988 3-hydroxyisobutyryl-C 100.0 6.9E-59 1.5E-63 446.3 34.3 319 35-353 10-332 (381)
4 PLN02874 3-hydroxyisobutyryl-C 100.0 9.4E-57 2E-61 433.2 35.2 319 31-351 8-330 (379)
5 PRK05617 3-hydroxyisobutyryl-C 100.0 6.1E-55 1.3E-59 415.9 31.1 308 34-350 3-317 (342)
6 KOG1684 Enoyl-CoA hydratase [L 100.0 3.9E-54 8.4E-59 393.0 28.0 324 27-353 31-361 (401)
7 PRK05980 enoyl-CoA hydratase; 100.0 2E-52 4.3E-57 385.9 25.5 249 34-352 3-257 (260)
8 KOG1680 Enoyl-CoA hydratase [L 100.0 4.5E-53 9.8E-58 375.4 17.4 244 33-352 36-284 (290)
9 PRK09076 enoyl-CoA hydratase; 100.0 1.2E-51 2.6E-56 380.1 25.7 246 32-352 1-252 (258)
10 PRK09120 p-hydroxycinnamoyl Co 100.0 1.1E-51 2.3E-56 383.4 25.1 250 33-352 7-264 (275)
11 PRK08150 enoyl-CoA hydratase; 100.0 1.7E-51 3.7E-56 378.2 25.0 243 34-352 2-249 (255)
12 PRK06127 enoyl-CoA hydratase; 100.0 2.6E-51 5.6E-56 380.0 25.7 251 30-352 7-263 (269)
13 PRK07260 enoyl-CoA hydratase; 100.0 1.5E-51 3.3E-56 378.9 24.0 249 34-352 2-255 (255)
14 PRK06142 enoyl-CoA hydratase; 100.0 2.2E-51 4.8E-56 381.2 24.8 249 34-352 6-267 (272)
15 PRK05862 enoyl-CoA hydratase; 100.0 2.1E-51 4.5E-56 378.4 24.2 243 34-352 4-251 (257)
16 PRK09245 enoyl-CoA hydratase; 100.0 2.6E-51 5.6E-56 379.7 24.8 251 32-352 1-260 (266)
17 PRK09674 enoyl-CoA hydratase-i 100.0 2.2E-51 4.7E-56 377.7 24.0 243 34-352 2-249 (255)
18 PRK06143 enoyl-CoA hydratase; 100.0 2.4E-51 5.2E-56 377.4 24.2 244 34-352 6-256 (256)
19 PRK08258 enoyl-CoA hydratase; 100.0 4.2E-51 9.1E-56 380.1 25.8 248 35-352 18-271 (277)
20 PRK08140 enoyl-CoA hydratase; 100.0 4.1E-51 8.9E-56 377.5 25.1 249 33-352 3-256 (262)
21 PRK07657 enoyl-CoA hydratase; 100.0 3.8E-51 8.3E-56 377.2 24.6 247 32-352 1-254 (260)
22 PRK07511 enoyl-CoA hydratase; 100.0 6.4E-51 1.4E-55 375.8 25.3 248 34-352 3-255 (260)
23 PRK05809 3-hydroxybutyryl-CoA 100.0 5.2E-51 1.1E-55 376.4 24.6 246 33-352 3-254 (260)
24 PRK07799 enoyl-CoA hydratase; 100.0 7.4E-51 1.6E-55 375.9 25.5 247 34-352 5-257 (263)
25 PRK06563 enoyl-CoA hydratase; 100.0 3.6E-51 7.7E-56 376.4 23.3 243 36-352 1-249 (255)
26 PRK08139 enoyl-CoA hydratase; 100.0 7.9E-51 1.7E-55 376.0 25.6 247 32-352 9-260 (266)
27 TIGR02280 PaaB1 phenylacetate 100.0 5.9E-51 1.3E-55 375.2 24.5 245 36-352 1-250 (256)
28 PLN02664 enoyl-CoA hydratase/d 100.0 6.8E-51 1.5E-55 378.3 25.2 247 36-352 10-269 (275)
29 PLN02600 enoyl-CoA hydratase 100.0 5.6E-51 1.2E-55 374.0 23.6 238 41-352 2-245 (251)
30 PRK07658 enoyl-CoA hydratase; 100.0 6.3E-51 1.4E-55 375.3 24.0 244 35-352 3-251 (257)
31 PRK08252 enoyl-CoA hydratase; 100.0 8E-51 1.7E-55 373.7 24.5 242 33-352 2-248 (254)
32 PRK08138 enoyl-CoA hydratase; 100.0 1.1E-50 2.5E-55 374.2 25.0 243 34-352 7-255 (261)
33 PRK05981 enoyl-CoA hydratase; 100.0 2E-50 4.4E-55 373.7 24.3 250 33-352 3-260 (266)
34 PRK07659 enoyl-CoA hydratase; 100.0 2.1E-50 4.6E-55 372.1 23.6 244 34-352 6-254 (260)
35 PRK05995 enoyl-CoA hydratase; 100.0 2.5E-50 5.5E-55 372.2 24.2 248 33-352 3-256 (262)
36 PRK05870 enoyl-CoA hydratase; 100.0 1.2E-50 2.7E-55 371.4 21.8 243 32-350 1-249 (249)
37 PRK06494 enoyl-CoA hydratase; 100.0 3.1E-50 6.8E-55 370.9 24.1 243 33-352 3-253 (259)
38 PRK06023 enoyl-CoA hydratase; 100.0 2.3E-50 5E-55 370.1 22.5 241 34-350 3-251 (251)
39 PRK07468 enoyl-CoA hydratase; 100.0 4.4E-50 9.6E-55 370.4 24.5 248 33-352 3-256 (262)
40 PRK06210 enoyl-CoA hydratase; 100.0 4E-50 8.7E-55 372.9 23.2 250 33-352 4-266 (272)
41 PRK06688 enoyl-CoA hydratase; 100.0 5.3E-50 1.1E-54 369.7 23.6 246 32-352 3-253 (259)
42 PRK05864 enoyl-CoA hydratase; 100.0 6E-50 1.3E-54 372.1 24.0 253 30-352 5-269 (276)
43 PRK05674 gamma-carboxygeranoyl 100.0 4.5E-50 9.8E-55 370.7 23.0 248 33-352 4-258 (265)
44 PRK03580 carnitinyl-CoA dehydr 100.0 5.9E-50 1.3E-54 369.4 23.7 244 33-352 2-255 (261)
45 PRK08259 enoyl-CoA hydratase; 100.0 4E-50 8.8E-55 368.8 22.2 244 32-352 1-249 (254)
46 TIGR03210 badI 2-ketocyclohexa 100.0 7.9E-50 1.7E-54 367.5 23.2 242 34-352 2-250 (256)
47 PLN02888 enoyl-CoA hydratase 100.0 1.3E-49 2.8E-54 367.6 24.7 247 31-352 6-258 (265)
48 PRK06495 enoyl-CoA hydratase; 100.0 1.3E-49 2.8E-54 366.4 24.1 245 32-352 2-251 (257)
49 PRK07509 enoyl-CoA hydratase; 100.0 1.6E-49 3.4E-54 367.0 24.6 248 32-352 1-257 (262)
50 PRK07327 enoyl-CoA hydratase; 100.0 1.6E-49 3.5E-54 367.7 24.7 246 31-352 8-262 (268)
51 PF00378 ECH: Enoyl-CoA hydrat 100.0 3.2E-50 7E-55 368.2 19.3 239 38-350 2-245 (245)
52 TIGR01929 menB naphthoate synt 100.0 1.1E-49 2.4E-54 367.1 22.8 244 35-352 3-253 (259)
53 PRK06144 enoyl-CoA hydratase; 100.0 1.6E-49 3.4E-54 366.7 23.8 244 32-352 6-256 (262)
54 PLN03214 probable enoyl-CoA hy 100.0 1.4E-49 3.1E-54 369.4 22.7 253 27-352 4-265 (278)
55 PRK07938 enoyl-CoA hydratase; 100.0 2.7E-49 5.8E-54 362.4 23.4 238 38-352 6-248 (249)
56 COG1024 CaiD Enoyl-CoA hydrata 100.0 4.4E-49 9.6E-54 363.0 24.6 246 32-352 3-254 (257)
57 PRK08260 enoyl-CoA hydratase; 100.0 4.6E-49 9.9E-54 369.6 23.7 248 34-352 4-272 (296)
58 PRK11423 methylmalonyl-CoA dec 100.0 4.9E-49 1.1E-53 363.0 23.2 244 33-352 3-255 (261)
59 PRK07396 dihydroxynaphthoic ac 100.0 6.4E-49 1.4E-53 364.6 23.6 246 33-352 12-263 (273)
60 PRK07827 enoyl-CoA hydratase; 100.0 1.3E-48 2.8E-53 360.4 25.2 247 33-352 5-255 (260)
61 PRK06072 enoyl-CoA hydratase; 100.0 1.4E-48 3.1E-53 357.5 24.7 237 36-352 2-242 (248)
62 TIGR03189 dienoyl_CoA_hyt cycl 100.0 1.2E-48 2.6E-53 358.3 23.6 237 36-352 3-245 (251)
63 PRK07110 polyketide biosynthes 100.0 4.6E-48 9.9E-53 354.3 23.9 239 32-347 3-246 (249)
64 PRK07854 enoyl-CoA hydratase; 100.0 4.6E-48 9.9E-53 353.0 23.7 231 36-352 2-237 (243)
65 PLN02921 naphthoate synthase 100.0 5.1E-48 1.1E-52 365.1 24.4 247 32-352 63-317 (327)
66 PRK06190 enoyl-CoA hydratase; 100.0 2E-47 4.4E-52 351.3 23.9 228 33-333 3-235 (258)
67 PRK08321 naphthoate synthase; 100.0 1.6E-47 3.5E-52 359.6 23.7 249 33-352 22-292 (302)
68 PRK07112 polyketide biosynthes 100.0 2.6E-47 5.7E-52 350.5 23.6 242 33-352 3-249 (255)
69 PRK12478 enoyl-CoA hydratase; 100.0 6.2E-48 1.3E-52 361.6 19.2 245 34-352 5-275 (298)
70 PRK05869 enoyl-CoA hydratase; 100.0 1.7E-45 3.6E-50 331.5 20.4 210 32-313 1-220 (222)
71 TIGR03222 benzo_boxC benzoyl-C 100.0 4.7E-45 1E-49 363.2 22.5 243 36-352 260-538 (546)
72 PRK08290 enoyl-CoA hydratase; 100.0 1.6E-44 3.4E-49 337.2 22.1 231 33-332 3-257 (288)
73 PRK08184 benzoyl-CoA-dihydrodi 100.0 1.5E-44 3.3E-49 360.8 22.0 242 37-352 265-542 (550)
74 PRK08788 enoyl-CoA hydratase; 100.0 7.3E-44 1.6E-48 331.0 25.0 248 30-348 13-274 (287)
75 PRK11730 fadB multifunctional 100.0 2.8E-44 6.1E-49 372.0 24.0 284 35-351 7-297 (715)
76 PRK06213 enoyl-CoA hydratase; 100.0 3E-44 6.6E-49 325.3 20.4 223 33-328 2-228 (229)
77 KOG1679 Enoyl-CoA hydratase [L 100.0 2.3E-44 5E-49 307.1 14.3 250 33-352 26-285 (291)
78 PRK08272 enoyl-CoA hydratase; 100.0 2.4E-43 5.1E-48 331.8 22.5 213 32-314 8-246 (302)
79 PRK11154 fadJ multifunctional 100.0 6.8E-43 1.5E-47 361.7 24.4 280 32-351 3-294 (708)
80 TIGR03200 dearomat_oah 6-oxocy 100.0 3.6E-42 7.7E-47 322.8 25.1 270 44-350 38-328 (360)
81 TIGR02440 FadJ fatty oxidation 100.0 2.6E-42 5.7E-47 356.6 24.9 275 39-351 6-289 (699)
82 KOG1681 Enoyl-CoA isomerase [L 100.0 4.3E-43 9.3E-48 301.9 12.0 244 40-352 28-285 (292)
83 KOG0016 Enoyl-CoA hydratase/is 100.0 5E-42 1.1E-46 302.1 18.1 250 33-352 6-264 (266)
84 TIGR02437 FadB fatty oxidation 100.0 1.4E-40 3E-45 343.9 24.5 283 35-351 7-297 (714)
85 PLN02267 enoyl-CoA hydratase/i 100.0 1.4E-40 3E-45 302.8 20.6 180 36-218 2-190 (239)
86 TIGR02441 fa_ox_alpha_mit fatt 100.0 2.2E-40 4.7E-45 343.1 23.9 293 34-351 13-321 (737)
87 COG0447 MenB Dihydroxynaphthoi 100.0 8.1E-39 1.8E-43 273.6 12.0 249 31-352 15-272 (282)
88 cd06558 crotonase-like Crotona 100.0 1.4E-37 3.1E-42 274.7 17.7 186 36-223 1-191 (195)
89 TIGR03222 benzo_boxC benzoyl-C 100.0 3E-37 6.5E-42 307.4 20.5 195 28-223 5-222 (546)
90 KOG1682 Enoyl-CoA isomerase [L 100.0 1.8E-36 3.9E-41 256.8 17.9 244 35-352 33-281 (287)
91 PRK08184 benzoyl-CoA-dihydrodi 100.0 6.3E-36 1.4E-40 298.9 20.2 193 30-223 11-226 (550)
92 cd07014 S49_SppA Signal peptid 99.7 6.1E-18 1.3E-22 147.2 8.1 139 61-217 22-173 (177)
93 cd07020 Clp_protease_NfeD_1 No 99.7 8.6E-18 1.9E-22 147.5 9.1 144 45-217 2-170 (187)
94 PF13766 ECH_C: 2-enoyl-CoA Hy 99.5 2.5E-14 5.4E-19 115.7 7.9 93 254-353 4-96 (118)
95 cd07016 S14_ClpP_1 Caseinolyti 99.5 1.3E-13 2.9E-18 117.9 7.9 125 61-210 15-160 (160)
96 cd07019 S49_SppA_1 Signal pept 99.5 9.4E-14 2E-18 124.2 7.2 87 59-161 19-105 (211)
97 cd00394 Clp_protease_like Case 99.4 1E-12 2.2E-17 112.5 9.9 134 58-210 8-161 (161)
98 cd07022 S49_Sppa_36K_type Sign 99.4 3.1E-12 6.8E-17 114.6 10.2 94 50-162 13-109 (214)
99 TIGR00705 SppA_67K signal pept 99.3 1E-11 2.2E-16 126.4 10.8 161 40-226 306-521 (584)
100 cd07023 S49_Sppa_N_C Signal pe 99.2 4.6E-11 9.9E-16 106.7 10.2 100 44-161 2-101 (208)
101 cd07021 Clp_protease_NfeD_like 99.1 3.5E-10 7.5E-15 98.2 10.3 135 45-213 2-171 (178)
102 TIGR00706 SppA_dom signal pept 99.1 2.4E-10 5.3E-15 101.9 9.3 148 44-217 2-199 (207)
103 cd07018 S49_SppA_67K_type Sign 98.9 4.8E-09 1E-13 94.5 9.3 138 58-216 26-216 (222)
104 cd07015 Clp_protease_NfeD Nodu 98.6 5.6E-07 1.2E-11 77.5 10.5 131 58-213 10-165 (172)
105 PRK00277 clpP ATP-dependent Cl 98.4 8.3E-07 1.8E-11 78.6 8.7 132 57-213 39-196 (200)
106 KOG1683 Hydroxyacyl-CoA dehydr 98.4 1.2E-07 2.6E-12 88.9 2.5 165 43-213 66-240 (380)
107 PRK12319 acetyl-CoA carboxylas 98.4 3.6E-05 7.7E-10 70.5 18.0 135 55-214 76-215 (256)
108 cd07013 S14_ClpP Caseinolytic 98.4 1.9E-06 4.1E-11 73.8 9.0 126 58-210 9-162 (162)
109 CHL00198 accA acetyl-CoA carbo 98.3 1.6E-05 3.6E-10 74.5 14.6 135 55-214 132-271 (322)
110 PRK12553 ATP-dependent Clp pro 98.2 3.7E-06 7.9E-11 74.9 8.1 129 58-213 44-202 (207)
111 PLN03230 acetyl-coenzyme A car 98.2 4.1E-05 8.9E-10 73.7 14.6 134 56-213 200-337 (431)
112 PLN03229 acetyl-coenzyme A car 98.2 3.4E-05 7.4E-10 78.7 14.7 134 55-213 220-358 (762)
113 TIGR00513 accA acetyl-CoA carb 98.2 5.2E-05 1.1E-09 71.1 14.3 135 55-214 129-268 (316)
114 cd07017 S14_ClpP_2 Caseinolyti 98.1 6E-06 1.3E-10 71.3 7.2 128 58-210 18-171 (171)
115 PF00574 CLP_protease: Clp pro 98.1 5.2E-06 1.1E-10 72.4 6.8 134 58-213 25-181 (182)
116 PRK14512 ATP-dependent Clp pro 98.1 9.4E-06 2E-10 71.6 8.0 131 58-213 32-188 (197)
117 PRK05724 acetyl-CoA carboxylas 98.1 7.6E-05 1.6E-09 70.1 13.8 135 55-214 129-268 (319)
118 CHL00028 clpP ATP-dependent Cl 98.1 3.3E-05 7.3E-10 68.2 10.6 132 58-214 39-197 (200)
119 PRK14514 ATP-dependent Clp pro 97.9 5.1E-05 1.1E-09 67.9 8.7 132 57-213 62-219 (221)
120 TIGR00493 clpP ATP-dependent C 97.9 9.5E-05 2.1E-09 65.0 10.2 130 58-212 35-190 (191)
121 PRK10949 protease 4; Provision 97.9 7.6E-05 1.6E-09 76.7 10.7 150 41-215 325-531 (618)
122 PRK14513 ATP-dependent Clp pro 97.9 0.00011 2.3E-09 65.0 9.9 132 57-215 35-194 (201)
123 TIGR03134 malonate_gamma malon 97.8 0.0021 4.5E-08 58.3 17.6 152 41-216 30-192 (238)
124 PRK12551 ATP-dependent Clp pro 97.7 0.00033 7.2E-09 61.7 10.2 133 57-214 33-191 (196)
125 TIGR03133 malonate_beta malona 97.7 0.00094 2E-08 61.7 13.0 146 44-215 61-219 (274)
126 PRK11778 putative inner membra 97.5 0.00038 8.3E-09 65.9 8.6 151 41-216 89-289 (330)
127 PF01972 SDH_sah: Serine dehyd 97.5 0.0016 3.6E-08 59.4 11.9 112 38-174 55-166 (285)
128 PRK07189 malonate decarboxylas 97.5 0.0012 2.7E-08 61.6 10.9 146 44-215 70-228 (301)
129 PRK12552 ATP-dependent Clp pro 97.4 0.0023 5E-08 57.3 11.0 139 57-213 48-214 (222)
130 PRK05654 acetyl-CoA carboxylas 97.3 0.0049 1.1E-07 57.6 13.2 147 44-220 123-273 (292)
131 TIGR00515 accD acetyl-CoA carb 97.2 0.0072 1.6E-07 56.3 13.1 147 44-220 122-272 (285)
132 COG1030 NfeD Membrane-bound se 97.2 0.0025 5.4E-08 61.9 10.0 145 40-213 24-188 (436)
133 COG0616 SppA Periplasmic serin 97.2 0.0024 5.1E-08 60.7 9.5 77 63-162 82-164 (317)
134 PF01343 Peptidase_S49: Peptid 97.0 0.00057 1.2E-08 57.9 3.1 95 123-217 3-144 (154)
135 CHL00174 accD acetyl-CoA carbo 97.0 0.017 3.7E-07 53.8 12.9 149 44-221 135-287 (296)
136 TIGR01117 mmdA methylmalonyl-C 96.9 0.021 4.5E-07 57.8 14.2 149 49-218 321-486 (512)
137 COG0740 ClpP Protease subunit 96.9 0.0071 1.5E-07 53.0 9.2 96 118-215 77-194 (200)
138 PF01039 Carboxyl_trans: Carbo 96.8 0.01 2.2E-07 60.0 10.7 143 40-215 53-207 (493)
139 COG0825 AccA Acetyl-CoA carbox 96.5 0.0028 6E-08 58.1 3.8 90 114-213 176-266 (317)
140 TIGR00705 SppA_67K signal pept 96.1 0.033 7.1E-07 57.4 10.0 84 61-162 76-161 (584)
141 PLN02820 3-methylcrotonyl-CoA 95.9 0.12 2.6E-06 52.9 12.4 140 44-215 131-281 (569)
142 TIGR01117 mmdA methylmalonyl-C 95.5 0.087 1.9E-06 53.4 9.9 135 44-214 84-229 (512)
143 PRK10949 protease 4; Provision 94.7 0.23 5E-06 51.4 10.4 84 61-162 95-180 (618)
144 PLN02820 3-methylcrotonyl-CoA 93.4 0.3 6.5E-06 50.0 8.0 141 57-217 381-544 (569)
145 KOG0840 ATP-dependent Clp prot 93.0 0.45 9.8E-06 43.1 7.5 125 58-212 101-256 (275)
146 COG0777 AccD Acetyl-CoA carbox 93.0 1.3 2.9E-05 40.6 10.6 145 44-218 124-272 (294)
147 PF01039 Carboxyl_trans: Carbo 92.5 0.54 1.2E-05 47.5 8.4 152 47-218 298-469 (493)
148 COG4799 Acetyl-CoA carboxylase 90.8 0.33 7.2E-06 48.8 4.7 99 45-157 94-194 (526)
149 PLN02157 3-hydroxyisobutyryl-C 89.9 0.62 1.4E-05 45.7 5.7 59 289-351 228-289 (401)
150 smart00250 PLEC Plectin repeat 62.1 6.3 0.00014 24.7 1.8 18 192-209 18-35 (38)
151 PF06833 MdcE: Malonate decarb 60.0 23 0.0005 32.0 5.6 98 110-215 89-189 (234)
152 COG4799 Acetyl-CoA carboxylase 59.4 73 0.0016 32.4 9.6 149 48-217 329-498 (526)
153 PF00681 Plectin: Plectin repe 54.1 4.5 9.7E-05 26.4 0.1 19 191-209 17-35 (45)
154 COG1570 XseA Exonuclease VII, 50.7 25 0.00055 34.8 4.7 74 61-156 176-253 (440)
155 PF02601 Exonuc_VII_L: Exonucl 50.2 27 0.00058 33.0 4.8 75 60-156 54-135 (319)
156 PRK07938 enoyl-CoA hydratase; 48.2 78 0.0017 28.7 7.4 132 134-279 108-248 (249)
157 KOG0540 3-Methylcrotonyl-CoA c 44.5 39 0.00085 33.5 4.9 96 111-218 407-512 (536)
158 TIGR00237 xseA exodeoxyribonuc 43.6 39 0.00084 33.6 4.9 37 117-156 210-247 (432)
159 PRK05864 enoyl-CoA hydratase; 36.1 1.5E+02 0.0033 27.2 7.5 140 125-280 116-270 (276)
160 KOG3997 Major apurinic/apyrimi 36.1 58 0.0012 29.2 4.2 57 38-95 134-192 (281)
161 PRK00286 xseA exodeoxyribonucl 33.4 60 0.0013 32.2 4.5 37 117-156 215-252 (438)
162 PRK12478 enoyl-CoA hydratase; 32.2 2E+02 0.0043 26.9 7.6 89 178-280 176-276 (298)
163 PLN02921 naphthoate synthase 30.3 1.8E+02 0.004 27.7 7.0 90 178-281 228-319 (327)
164 PRK05617 3-hydroxyisobutyryl-C 28.3 1.8E+02 0.0039 27.9 6.6 150 123-274 105-312 (342)
165 PLN02888 enoyl-CoA hydratase 26.8 1.4E+02 0.0031 27.2 5.5 92 179-284 167-263 (265)
166 PRK05980 enoyl-CoA hydratase; 26.0 3.1E+02 0.0067 24.9 7.6 87 180-280 169-258 (260)
167 COG4565 CitB Response regulato 24.9 4.1E+02 0.0088 23.9 7.6 55 169-223 56-114 (224)
168 TIGR01929 menB naphthoate synt 24.2 2.1E+02 0.0046 26.0 6.1 87 180-280 166-254 (259)
169 PRK08150 enoyl-CoA hydratase; 22.4 1.8E+02 0.0039 26.5 5.2 89 180-282 161-252 (255)
170 PLN02600 enoyl-CoA hydratase 22.2 2.1E+02 0.0045 25.9 5.7 87 180-280 157-246 (251)
171 PRK08321 naphthoate synthase; 21.3 2.1E+02 0.0045 26.8 5.6 134 134-281 149-294 (302)
172 PRK07396 dihydroxynaphthoic ac 21.0 2.1E+02 0.0046 26.3 5.5 89 179-281 175-265 (273)
173 COG0074 SucD Succinyl-CoA synt 20.9 2.3E+02 0.0049 26.5 5.4 88 39-138 143-240 (293)
174 PRK07112 polyketide biosynthes 20.8 2E+02 0.0043 26.1 5.2 85 180-280 164-250 (255)
175 KOG0595 Serine/threonine-prote 20.7 1.7E+02 0.0036 28.9 4.7 37 87-123 90-126 (429)
176 PRK08258 enoyl-CoA hydratase; 20.5 2.6E+02 0.0056 25.7 5.9 87 180-280 183-272 (277)
No 1
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1.1e-60 Score=460.02 Aligned_cols=321 Identities=69% Similarity=1.129 Sum_probs=282.0
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
.+.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++ |.|++||+|+|++++......+..+..
T Consensus 36 ~~~V~~e~~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~ 115 (401)
T PLN02157 36 DYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAI 115 (401)
T ss_pred CCceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHH
Confidence 4458899999999999999999999999999999999999999999987 889999999999998653222222223
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 188 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~ 188 (353)
..++...+.+...|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+.+
T Consensus 116 ~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~ 195 (401)
T PLN02157 116 REFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEY 195 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHH
Confidence 44555556677889999999999999999999999999999999999999999999999999999999999999966999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
|+|||+.++|+||+++|||+++||+++++...+.+.++...+|.++...|+.+.....+...........+..||+.+++
T Consensus 196 L~LTG~~i~A~eA~~~GLv~~vVp~~~l~~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~ 275 (401)
T PLN02157 196 LGLTGLKLSGAEMLACGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTV 275 (401)
T ss_pred HHHcCCcCCHHHHHHcCCceEEeCHhHHHHHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCH
Confidence 99999999999999999999999999997777666888888999999999988765333334445557889999999999
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
++++++++....++.++|+++.++.|.+.||.|++.|.++++++...++.++++.|+++..+++....++||.|||+|.|
T Consensus 276 ~ei~~al~~~~~kr~~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~L 355 (401)
T PLN02157 276 EEIIDSLEIEAGRRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARL 355 (401)
T ss_pred HHHHHHHHhhhcccchHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 99999998655556789999999999999999999999999999999999999999999999873112599999999999
Q ss_pred ccCCC
Q 018632 349 LNKHV 353 (353)
Q Consensus 349 ~~~~~ 353 (353)
+|||+
T Consensus 356 iDKd~ 360 (401)
T PLN02157 356 IDKDE 360 (401)
T ss_pred cCCCC
Confidence 99974
No 2
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=2e-59 Score=451.13 Aligned_cols=323 Identities=66% Similarity=1.139 Sum_probs=284.1
Q ss_pred CCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChH
Q 018632 31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLE 106 (353)
Q Consensus 31 ~~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~ 106 (353)
...+.|.++..+++++||||||+++|+||.+|+.+|.++++.++.|++|++ |.|++||+|+|++++......++.+
T Consensus 39 ~~~~~v~~e~~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~ 118 (407)
T PLN02851 39 DLQDQVLVEGRAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVE 118 (407)
T ss_pred CCCCCeEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchH
Confidence 345568899999999999999999999999999999999999999999987 8899999999999987643222334
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHH
Q 018632 107 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 186 (353)
Q Consensus 107 ~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a 186 (353)
....++...+.+...+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+
T Consensus 119 ~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~~g 198 (407)
T PLN02851 119 ECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGYLG 198 (407)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCHHH
Confidence 55667778888889999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
.+|+|||++++|+||+++||+++++|++++..+.+.+.++...++..+....+.|.....+...........|+.||+.+
T Consensus 199 ~~L~LTG~~i~a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~ 278 (407)
T PLN02851 199 EYLALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHD 278 (407)
T ss_pred HHHHHhCCcCCHHHHHHCCCceeecCHhhHHHHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999987777777777777888888878776442222234455578999999999
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
++++|++.|+....+...+|++++++.|.+.||.|++.|+++++++...++.++++.|+++..+++....++||.|||+|
T Consensus 279 sv~~I~~~L~~~~~~~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA 358 (407)
T PLN02851 279 TVEEIIEALENEAASSYDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRA 358 (407)
T ss_pred CHHHHHHHHHhcccccchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 99999999997543335689999999999999999999999999999999999999999999988621137999999999
Q ss_pred eeccCCC
Q 018632 347 QILNKHV 353 (353)
Q Consensus 347 fl~~~~~ 353 (353)
.|+|||+
T Consensus 359 ~LIDKd~ 365 (407)
T PLN02851 359 RLVDKDF 365 (407)
T ss_pred HhcCCCC
Confidence 9999984
No 3
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=6.9e-59 Score=446.30 Aligned_cols=319 Identities=48% Similarity=0.813 Sum_probs=278.0
Q ss_pred ceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHH
Q 018632 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKD 110 (353)
Q Consensus 35 ~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 110 (353)
.|.++.+++|++||||||+++|+||.+|+.+|.++|+.++.|++|++ |.|++||+|+|++++......+.......
T Consensus 10 ~v~~~~~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~ 89 (381)
T PLN02988 10 QVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGAN 89 (381)
T ss_pred ceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHH
Confidence 47888899999999999999999999999999999999999999887 88999999999999864221221122234
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHHHH
Q 018632 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA 190 (353)
Q Consensus 111 ~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ 190 (353)
++...+.+...+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+.+|+
T Consensus 90 ~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~l~ 169 (381)
T PLN02988 90 FFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVG 169 (381)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHHHH
Confidence 44444556778899999999999999999999999999999999999999999999999999999999999998789999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHHH
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 270 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (353)
|||++++|+||+++|||+++||+++++.....++++...+|..+...++.+...+.............|+.||+.+++++
T Consensus 170 LTG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~ 249 (381)
T PLN02988 170 LTGARLDGAEMLACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEE 249 (381)
T ss_pred HcCCCCCHHHHHHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999999988888888888888889989998875542222344445889999999999999
Q ss_pred HHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheecc
Q 018632 271 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 350 (353)
Q Consensus 271 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~~ 350 (353)
|++.|+....+...+|++++++.|.+.||.|++.|+++++++...++.++++.|+++..+++....++||.|||+|.|+|
T Consensus 250 i~~~L~~~~~~~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiD 329 (381)
T PLN02988 250 IISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVD 329 (381)
T ss_pred HHHHHHhhccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcC
Confidence 99999974322356899999999999999999999999999999999999999999999988511149999999999999
Q ss_pred CCC
Q 018632 351 KHV 353 (353)
Q Consensus 351 ~~~ 353 (353)
||+
T Consensus 330 Kd~ 332 (381)
T PLN02988 330 KDK 332 (381)
T ss_pred CCC
Confidence 974
No 4
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=9.4e-57 Score=433.20 Aligned_cols=319 Identities=44% Similarity=0.750 Sum_probs=273.5
Q ss_pred CCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChH
Q 018632 31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLE 106 (353)
Q Consensus 31 ~~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~ 106 (353)
+.++.+.++.+++|++||||||+++|+||.+|+.+|.++++.++.|++|++ |.|++||+|+|++++...... ..
T Consensus 8 ~~~~~v~~~~~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~--~~ 85 (379)
T PLN02874 8 PAEEVVLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES--DD 85 (379)
T ss_pred CCCCceEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc--ch
Confidence 445568889999999999999999999999999999999999999999997 889999999999987542111 12
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHH
Q 018632 107 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 186 (353)
Q Consensus 107 ~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a 186 (353)
....+...++.+...+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 86 ~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a 165 (379)
T PLN02874 86 SCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLG 165 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHH
Confidence 22233444556677899999999999999999999999999999999999999999999999999999999999999669
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
.+|+|||++++|+||+++|||++|||++++++....+.++...+...+...++.+.................+..||+.+
T Consensus 166 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 245 (379)
T PLN02874 166 EYLALTGARLNGKEMVACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKD 245 (379)
T ss_pred HHHHHcCCcccHHHHHHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998887666676666667777777777666543333445556688999999999
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
++.++++.+++..++...+|+.+++++|+++||.|++.+|++++.+...++.++++.|.......+....++||+||++|
T Consensus 246 ~~~eii~al~~~~~~~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~A 325 (379)
T PLN02874 246 TVEEIIKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRA 325 (379)
T ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccce
Confidence 99999999998766667899999999999999999999999999988889999999998887766532237999999999
Q ss_pred eeccC
Q 018632 347 QILNK 351 (353)
Q Consensus 347 fl~~~ 351 (353)
|+.+|
T Consensus 326 flidK 330 (379)
T PLN02874 326 LVIDK 330 (379)
T ss_pred EEEcC
Confidence 98433
No 5
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=6.1e-55 Score=415.87 Aligned_cols=308 Identities=38% Similarity=0.654 Sum_probs=265.0
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
+.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++............
T Consensus 3 ~~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (342)
T PRK05617 3 DEVLAEVEGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAA 82 (342)
T ss_pred ceEEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhH
Confidence 358899999999999999999999999999999999999999999988 888 899999999987653211111111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 188 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~ 188 (353)
..++.....++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..|++
T Consensus 83 ~~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~ 162 (342)
T PRK05617 83 DRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTY 162 (342)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHH
Confidence 13444455678889999999999999999999999999999999999999999999999999999999999998844999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhh-cCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV-TDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
|++||+.++|+||+++|||++|+|+++++...+.+.++- ....+.+.+.+..+.... ....+......|++||+..+
T Consensus 163 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 240 (342)
T PRK05617 163 LALTGARISAADALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPA--PASELAAQRAWIDECFAGDT 240 (342)
T ss_pred HHHcCCCCCHHHHHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCC--CcchhHHHHHHHHHHhCCCC
Confidence 999999999999999999999999988876655554332 334455666666654442 23367778889999999999
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++++++|++. ..+|+.+++++|+++||.|++.+|+++++....+++++++.|...+...+. ++|++||+++|
T Consensus 241 ~~~~~~~l~~~----~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~egv~af 313 (342)
T PRK05617 241 VEDIIAALEAD----GGEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLR---SPDFVEGVRAV 313 (342)
T ss_pred HHHHHHHHHhc----cHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh---CCchhhccceE
Confidence 99999999998 348999999999999999999999999998888999999999999999887 99999999999
Q ss_pred e-cc
Q 018632 348 I-LN 350 (353)
Q Consensus 348 l-~~ 350 (353)
+ ++
T Consensus 314 l~ek 317 (342)
T PRK05617 314 LIDK 317 (342)
T ss_pred EEcC
Confidence 8 54
No 6
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=3.9e-54 Score=393.03 Aligned_cols=324 Identities=50% Similarity=0.794 Sum_probs=298.3
Q ss_pred CCCcCCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CC-CCCcccCcchhhHHHhhh
Q 018632 27 SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GS-GRAFCAGGDIVSLYHFMN 101 (353)
Q Consensus 27 ~~~~~~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~-g~~F~aG~Dl~~~~~~~~ 101 (353)
+...+..+.|.++.++...+||||||+.+||||.+|...+.-.|..++.++.+++ |. |++||+|+|++.......
T Consensus 31 ~~~~~~~~~VL~e~~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~ 110 (401)
T KOG1684|consen 31 SVSTDSKDQVLVEGKGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIK 110 (401)
T ss_pred ccccccCCceEEecCCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhh
Confidence 3445556789999999999999999999999999999999999999999999886 55 699999999998888777
Q ss_pred cCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhc
Q 018632 102 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 181 (353)
Q Consensus 102 ~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~ 181 (353)
++..+....|+...+.+...+.++.||.||.++|..||||++|+..--||||||++.|+|||..+|++|+.|++++++|+
T Consensus 111 d~~~~~~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrl 190 (401)
T KOG1684|consen 111 DKETPEVKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRL 190 (401)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhC
Confidence 78888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcC-CHHHHHHHHHHhhcccCCChhhHHHHHHHHH
Q 018632 182 PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTD-DPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 260 (353)
Q Consensus 182 ~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
.|.-+.+|.|||.++++.||+.+||.++.||.++|..++++|.+.... +...+.+....|.....+.........+.|+
T Consensus 191 pg~lg~YLgLTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~ 270 (401)
T KOG1684|consen 191 PGYLGLYLGLTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVIN 270 (401)
T ss_pred ccHHHHhhhhccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHH
Confidence 997799999999999999999999999999999999999999644444 4478899999999887776666777899999
Q ss_pred HhcCcCCHHHHHHHHHhcc-CCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCC
Q 018632 261 KCFGLDTVEEIIDSLESEA-SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 339 (353)
Q Consensus 261 ~~~~~~~~~~i~~~l~~~~-~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d 339 (353)
.||+++++|+|++.|++-. .....+||++.++.|.+.||.|++.|.+.++.+...++++++..|+++..+... ++|
T Consensus 271 ~~Fs~~tVeeIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~~---~~D 347 (401)
T KOG1684|consen 271 KCFSANTVEEIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRMLM---RGD 347 (401)
T ss_pred HhhccccHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh---ccc
Confidence 9999999999999886543 446779999999999999999999999999999999999999999999999887 999
Q ss_pred hhhhhhheeccCCC
Q 018632 340 FYEVSNFQILNKHV 353 (353)
Q Consensus 340 ~~egi~afl~~~~~ 353 (353)
|.||++|.|+|||.
T Consensus 348 F~EGvRA~LIDKd~ 361 (401)
T KOG1684|consen 348 FCEGVRAVLIDKDQ 361 (401)
T ss_pred hhhhhhheeecCCc
Confidence 99999999999984
No 7
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-52 Score=385.87 Aligned_cols=249 Identities=28% Similarity=0.370 Sum_probs=223.8
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
+.|.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.| ++||+|.|++++............
T Consensus 3 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK05980 3 DTVLIEIRDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVAL 82 (260)
T ss_pred ceEEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhH
Confidence 468899999999999999999999999999999999999999999988 888 799999999987542111112223
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
..+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 83 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 162 (260)
T PRK05980 83 RDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRAL 162 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHH
Confidence 44555566788889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 163 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 196 (260)
T PRK05980 163 ELLLTGDAFSAERALEIGLVNAVVPHEELLPAAR---------------------------------------------- 196 (260)
T ss_pred HHHHcCCccCHHHHHHcCCCCcccCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999887765433
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++++|++.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|
T Consensus 197 ---------------------~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af 252 (260)
T PRK05980 197 ---------------------ALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAG---SADLREGLAAW 252 (260)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 448899999999999999999988888999999999999999887 99999999999
Q ss_pred eccCC
Q 018632 348 ILNKH 352 (353)
Q Consensus 348 l~~~~ 352 (353)
+++|+
T Consensus 253 ~~kr~ 257 (260)
T PRK05980 253 IERRR 257 (260)
T ss_pred hccCC
Confidence 99986
No 8
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=4.5e-53 Score=375.37 Aligned_cols=244 Identities=25% Similarity=0.306 Sum_probs=216.4
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
........+++|+.|+||||+++|+|+..++.+|.+++..++.|+.+.+ |.|++||+|.|++++.... ..+.
T Consensus 36 ~~~~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~----~~~~ 111 (290)
T KOG1680|consen 36 IKIELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDE----FQDV 111 (290)
T ss_pred ceeEEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhcc----cccc
Confidence 3344555678999999999999999999999999999999999999988 9999999999999987631 1110
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
....+...+..+.+.+||+||+|||+|+|||++|+++||+|||+++|+|++|+.++|++|.+|++++|+|.+|.+ |+
T Consensus 112 --~~~~~~~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Al 189 (290)
T KOG1680|consen 112 --SDGIFLRVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRAL 189 (290)
T ss_pred --ccccccchhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHH
Confidence 111122233444479999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
++++||++++|+||+++|||++|+|.+++...+.
T Consensus 190 e~~ltg~~~~AqeA~~~GlVn~Vvp~~~~l~eAv---------------------------------------------- 223 (290)
T KOG1680|consen 190 EMILTGRRLGAQEAKKIGLVNKVVPSGDALGEAV---------------------------------------------- 223 (290)
T ss_pred HHHHhcCcccHHHHHhCCceeEeecchhHHHHHH----------------------------------------------
Confidence 9999999999999999999999999998654333
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++.+|+++||.+++..|+.++.+.+.++.++++.|...+...+. .+|.+|||.+|
T Consensus 224 ---------------------~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~---~~d~~Eg~~~f 279 (290)
T KOG1680|consen 224 ---------------------KLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFA---TEDRLEGMTAF 279 (290)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhh---hHHHHHHHHHh
Confidence 459999999999999999999999999999999999999999888 99999999999
Q ss_pred eccCC
Q 018632 348 ILNKH 352 (353)
Q Consensus 348 l~~~~ 352 (353)
.++|+
T Consensus 280 ~~kr~ 284 (290)
T KOG1680|consen 280 AEKRK 284 (290)
T ss_pred cccCC
Confidence 99985
No 9
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-51 Score=380.11 Aligned_cols=246 Identities=20% Similarity=0.252 Sum_probs=221.5
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLE 106 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~ 106 (353)
|+..+.++++++|++||||||++ |++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++... +..
T Consensus 1 ~~~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~----~~~ 75 (258)
T PRK09076 1 MMIELDLEIDGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG----DKA 75 (258)
T ss_pred CceEEEEEEECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc----Chh
Confidence 35568999999999999999985 99999999999999999999999988 888 789999999987541 222
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-
Q 018632 107 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 185 (353)
Q Consensus 107 ~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~- 185 (353)
....+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 76 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~ 155 (258)
T PRK09076 76 VAREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGW 155 (258)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHH
Confidence 2233445566788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCc
Q 018632 186 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 265 (353)
Q Consensus 186 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (353)
+++|+++|++++|+||+++|||++|+|++++.+.+.
T Consensus 156 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 191 (258)
T PRK09076 156 AKRMILCGERVDAATALRIGLVEEVVEKGEAREAAL-------------------------------------------- 191 (258)
T ss_pred HHHHHHcCCcCCHHHHHHCCCCceecCchhHHHHHH--------------------------------------------
Confidence 999999999999999999999999999887764333
Q ss_pred CCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018632 266 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 345 (353)
Q Consensus 266 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~ 345 (353)
+++++|++++|.+++.+|++++.....++.+.++.|...+...+. ++|++||++
T Consensus 192 -----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~ 245 (258)
T PRK09076 192 -----------------------ALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFD---TEDQREGVN 245 (258)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CchHHHHHH
Confidence 458999999999999999999988888999999999999988887 999999999
Q ss_pred heeccCC
Q 018632 346 FQILNKH 352 (353)
Q Consensus 346 afl~~~~ 352 (353)
+|+++|+
T Consensus 246 af~~kr~ 252 (258)
T PRK09076 246 AFLEKRA 252 (258)
T ss_pred HHhcCCC
Confidence 9999986
No 10
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=1.1e-51 Score=383.41 Aligned_cols=250 Identities=22% Similarity=0.283 Sum_probs=218.8
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
++.|.++++++|++|+||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|.|++++............
T Consensus 7 ~~~i~~~~~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 86 (275)
T PRK09120 7 WDTVKVEVEDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEILQ 86 (275)
T ss_pred cccEEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhHHH
Confidence 6679999999999999999999999999999999999999999999998 899999999999987542111111112
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
..+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 87 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~ 166 (275)
T PRK09120 87 ERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDAL 166 (275)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHHH
Confidence 22334456678889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|+.++|+||+++|||++|+|++++++.+.
T Consensus 167 ~llltg~~~~A~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 200 (275)
T PRK09120 167 YYIMTGETFTGRKAAEMGLVNESVPLAQLRARTR---------------------------------------------- 200 (275)
T ss_pred HHHhcCCccCHHHHHHcCCcceecCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999988875444
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHH--HHhhhcCCCC-Chhhhh
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS--LQGVSRLISG-DFYEVS 344 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~--~~~~~~~~~~-d~~egi 344 (353)
+++++|++.||.+++.+|++++.....++.++++.|.... ...+. ++ |++||+
T Consensus 201 ---------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~d~~eg~ 256 (275)
T PRK09120 201 ---------------------ELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLD---PEGGREEGL 256 (275)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC---CHHHHHHHH
Confidence 4489999999999999999999988889999998876543 33454 78 899999
Q ss_pred hheeccCC
Q 018632 345 NFQILNKH 352 (353)
Q Consensus 345 ~afl~~~~ 352 (353)
++|+++|+
T Consensus 257 ~afl~kr~ 264 (275)
T PRK09120 257 KQFLDDKS 264 (275)
T ss_pred HHHHhccc
Confidence 99999985
No 11
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-51 Score=378.20 Aligned_cols=243 Identities=25% Similarity=0.230 Sum_probs=218.0
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
+.|.++++++|++||||||++.|+||.+|+.+|.++++.++ +++++ |.|++||+|+|++++... +.....
T Consensus 2 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~~~ 75 (255)
T PRK08150 2 SLVSYELDGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRER----DAGEGM 75 (255)
T ss_pred ceEEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhc----cchhHH
Confidence 46889999999999999999999999999999999999998 66666 999999999999987542 111222
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
.+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 76 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~ 155 (255)
T PRK08150 76 HHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTD 155 (255)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 3345566788889999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
|++||++++|+||+++||||+|+|++++.+.+.
T Consensus 156 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 188 (255)
T PRK08150 156 MMLTGRVYDAQEGERLGLAQYLVPAGEALDKAM----------------------------------------------- 188 (255)
T ss_pred HHHcCCcCCHHHHHHcCCccEeeCchHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999988765443
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
+++++|+++||.+++.+|++++.....+++++++.|...+...+. ++|++||+++|+
T Consensus 189 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~ 245 (255)
T PRK08150 189 --------------------ELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQS---APEAKERLRAFL 245 (255)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh
Confidence 448999999999999999999988888999999999988877776 999999999999
Q ss_pred ccCC
Q 018632 349 LNKH 352 (353)
Q Consensus 349 ~~~~ 352 (353)
++|+
T Consensus 246 ~kr~ 249 (255)
T PRK08150 246 EKKA 249 (255)
T ss_pred ccCC
Confidence 9975
No 12
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-51 Score=379.97 Aligned_cols=251 Identities=21% Similarity=0.293 Sum_probs=225.0
Q ss_pred cCCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCC
Q 018632 30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGK 104 (353)
Q Consensus 30 ~~~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~ 104 (353)
..+.+.|.++++++|++|+||||+++|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++.... .+
T Consensus 7 ~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~--~~ 84 (269)
T PRK06127 7 SSPTGKLLAEKTGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR--SD 84 (269)
T ss_pred CCCCCceEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc--cc
Confidence 3444568999999999999999999999999999999999999999999988 887 7999999999875421 12
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH
Q 018632 105 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 184 (353)
Q Consensus 105 ~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~ 184 (353)
.+....+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 85 ~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 164 (269)
T PRK06127 85 AEAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGP 164 (269)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCH
Confidence 22233455556678888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhc
Q 018632 185 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 263 (353)
Q Consensus 185 ~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
. +++|++||++++|+||+++|||++|+|++++++.+.
T Consensus 165 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------ 202 (269)
T PRK06127 165 SAAKDLFYTARRFDAAEALRIGLVHRVTAADDLETALA------------------------------------------ 202 (269)
T ss_pred HHHHHHHHcCCCCCHHHHHHcCCCCEeeCHHHHHHHHH------------------------------------------
Confidence 9 999999999999999999999999999888765444
Q ss_pred CcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018632 264 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 343 (353)
Q Consensus 264 ~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~eg 343 (353)
+++++|++.+|.+++.+|++++.....++.+.++.|...+...+. ++|++||
T Consensus 203 -------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~ 254 (269)
T PRK06127 203 -------------------------DYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFD---SEDYREG 254 (269)
T ss_pred -------------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---ChHHHHH
Confidence 348999999999999999999988888999999999999988887 9999999
Q ss_pred hhheeccCC
Q 018632 344 SNFQILNKH 352 (353)
Q Consensus 344 i~afl~~~~ 352 (353)
+.+|+++|+
T Consensus 255 ~~af~ekr~ 263 (269)
T PRK06127 255 RAAFMEKRK 263 (269)
T ss_pred HHHHhcCCC
Confidence 999999985
No 13
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-51 Score=378.88 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=223.6
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
+.+.++.+++|++|+||||++.|++|.+|+.+|.++++.++.|+++++ |.|++||+|+|++++.......+.....
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK07260 2 EHIIYEVEDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLV 81 (255)
T ss_pred CceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHH
Confidence 357888999999999999999999999999999999999999999987 8899999999999886432222222233
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
.+...+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 161 (255)
T PRK07260 82 KIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATH 161 (255)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHH
Confidence 3445567788899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
|+++|++++|+||+++||||+++|++++.+.+.
T Consensus 162 l~l~g~~~sa~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 194 (255)
T PRK07260 162 LAMTGEALTAEKALEYGFVYRVAESEKLEKTCE----------------------------------------------- 194 (255)
T ss_pred HHHhCCccCHHHHHHcCCcceecCHhHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999888765443
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
+++++|++.+|.+++.+|++++.....++++.++.|...+...+. ++|++||+++|+
T Consensus 195 --------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~ 251 (255)
T PRK07260 195 --------------------QLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAF---KEDFKEGVRAFS 251 (255)
T ss_pred --------------------HHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHH
Confidence 448999999999999999999988888999999999999888887 999999999999
Q ss_pred ccCC
Q 018632 349 LNKH 352 (353)
Q Consensus 349 ~~~~ 352 (353)
++|+
T Consensus 252 ~kr~ 255 (255)
T PRK07260 252 ERRR 255 (255)
T ss_pred hcCC
Confidence 9985
No 14
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-51 Score=381.21 Aligned_cols=249 Identities=23% Similarity=0.280 Sum_probs=222.1
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhh-------c
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMN-------Q 102 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~-------~ 102 (353)
+.+.++++++|++|+||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|.|++++..... .
T Consensus 6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~ 85 (272)
T PRK06142 6 ESFTVELADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLA 85 (272)
T ss_pred ceEEEEecCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccc
Confidence 458899999999999999999999999999999999999999999987 98999999999998754210 0
Q ss_pred CChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcC
Q 018632 103 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 182 (353)
Q Consensus 103 ~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~ 182 (353)
........+...+.+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~ 165 (272)
T PRK06142 86 RPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRII 165 (272)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHh
Confidence 11122333445567788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHH
Q 018632 183 GHL-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 260 (353)
Q Consensus 183 g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
|.. +++|+++|++++|+||+++||||+|+|+ +++.+.+.
T Consensus 166 G~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~~l~~~a~--------------------------------------- 206 (272)
T PRK06142 166 GDGHLRELALTGRDIDAAEAEKIGLVNRVYDDADALLAAAH--------------------------------------- 206 (272)
T ss_pred CHHHHHHHHHhCCCcCHHHHHHcCCccEecCCHHHHHHHHH---------------------------------------
Confidence 999 9999999999999999999999999986 66664333
Q ss_pred HhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCCh
Q 018632 261 KCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 340 (353)
Q Consensus 261 ~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~ 340 (353)
+++++|++.||.+++.+|++++.....++.++++.|...+...+. ++|+
T Consensus 207 ----------------------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~---~~d~ 255 (272)
T PRK06142 207 ----------------------------ATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLP---SKDL 255 (272)
T ss_pred ----------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccH
Confidence 348999999999999999999988888999999999999988887 9999
Q ss_pred hhhhhheeccCC
Q 018632 341 YEVSNFQILNKH 352 (353)
Q Consensus 341 ~egi~afl~~~~ 352 (353)
+||+.+|+++|+
T Consensus 256 ~egv~af~~kr~ 267 (272)
T PRK06142 256 TEAIAAHMEKRP 267 (272)
T ss_pred HHHHHHHhcCCC
Confidence 999999999985
No 15
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-51 Score=378.37 Aligned_cols=243 Identities=25% Similarity=0.329 Sum_probs=219.3
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
+.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++ |.|++||+|+|++++... +. ..
T Consensus 4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~----~~--~~ 77 (257)
T PRK05862 4 ETILVETRGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADL----SF--MD 77 (257)
T ss_pred ceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhcc----ch--hH
Confidence 458889999999999999999999999999999999999999999988 889999999999987542 11 11
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
.+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+
T Consensus 78 ~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T PRK05862 78 VYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMD 157 (257)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 2223344567788999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
|+++|+.++|+||+++||||+|+|++++.+.+.
T Consensus 158 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 190 (257)
T PRK05862 158 LCLTGRMMDAAEAERAGLVSRVVPADKLLDEAL----------------------------------------------- 190 (257)
T ss_pred HHHhCCccCHHHHHHcCCCCEeeCHhHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999887765443
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
+++++|++.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|+
T Consensus 191 --------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~~~~e~i~af~ 247 (257)
T PRK05862 191 --------------------AAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFA---TEDQKEGMAAFV 247 (257)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh
Confidence 348899999999999999999988888999999999999999887 999999999999
Q ss_pred ccCC
Q 018632 349 LNKH 352 (353)
Q Consensus 349 ~~~~ 352 (353)
++|+
T Consensus 248 ~kr~ 251 (257)
T PRK05862 248 EKRK 251 (257)
T ss_pred ccCC
Confidence 9985
No 16
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-51 Score=379.70 Aligned_cols=251 Identities=21% Similarity=0.325 Sum_probs=221.8
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhc--CC
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNT-NMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQ--GK 104 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~-~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~--~~ 104 (353)
|++.+.++++++|++||||||++.|++|. +|+.+|.++++.++.|++|++ |.|++||+|.|++++...... ..
T Consensus 1 m~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (266)
T PRK09245 1 MTDFLLVERDGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGS 80 (266)
T ss_pred CCCceEEEEECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 44568999999999999999999999995 999999999999999999987 999999999999987542110 01
Q ss_pred hHH-HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcCh
Q 018632 105 LEE-CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 183 (353)
Q Consensus 105 ~~~-~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g 183 (353)
... ...+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG 160 (266)
T PRK09245 81 PADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIG 160 (266)
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhh
Confidence 111 1223334556788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHh
Q 018632 184 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 262 (353)
Q Consensus 184 ~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
.. +++|+++|++++|+||+++||||+|+|++++++.+.
T Consensus 161 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------- 199 (266)
T PRK09245 161 MARAAEMAFTGDAIDAATALEWGLVSRVVPADQLLPAAR----------------------------------------- 199 (266)
T ss_pred HHHHHHHHHcCCCcCHHHHHHcCCcceecCHHHHHHHHH-----------------------------------------
Confidence 99 999999999999999999999999999888765443
Q ss_pred cCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018632 263 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 342 (353)
Q Consensus 263 ~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 342 (353)
+++++|++.||.+++.+|++++.....++++.++.|...+...+. ++|++|
T Consensus 200 --------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e 250 (266)
T PRK09245 200 --------------------------ALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHH---TADHRE 250 (266)
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHhHHH
Confidence 348999999999999999999988888899999999988888887 999999
Q ss_pred hhhheeccCC
Q 018632 343 VSNFQILNKH 352 (353)
Q Consensus 343 gi~afl~~~~ 352 (353)
|+++|+++|+
T Consensus 251 g~~af~~kr~ 260 (266)
T PRK09245 251 AVDAFLEKRP 260 (266)
T ss_pred HHHHHHcCCC
Confidence 9999999985
No 17
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=2.2e-51 Score=377.74 Aligned_cols=243 Identities=23% Similarity=0.303 Sum_probs=219.7
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
..|.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++... +. ..
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~--~~ 75 (255)
T PRK09674 2 SELLVSRQQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK----DL--AA 75 (255)
T ss_pred ceEEEEeECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhcc----ch--hh
Confidence 467889999999999999999999999999999999999999999987 999999999999987531 11 11
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
.+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 76 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~ 155 (255)
T PRK09674 76 TLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQ 155 (255)
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence 2223345677889999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
++++|+.++|+||+++||||+|+|++++.+.+.
T Consensus 156 l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~----------------------------------------------- 188 (255)
T PRK09674 156 MVLTGESITAQQAQQAGLVSEVFPPELTLERAL----------------------------------------------- 188 (255)
T ss_pred HHHcCCccCHHHHHHcCCCcEecChHHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999887764333
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
+.+++|++.||.+++.+|++++.....++.++++.|...+...+. ++|+++|+++|+
T Consensus 189 --------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~i~af~ 245 (255)
T PRK09674 189 --------------------QLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAA---TEDRHEGISAFL 245 (255)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHh
Confidence 458999999999999999999988888999999999999988887 999999999999
Q ss_pred ccCC
Q 018632 349 LNKH 352 (353)
Q Consensus 349 ~~~~ 352 (353)
++|+
T Consensus 246 ~kr~ 249 (255)
T PRK09674 246 EKRT 249 (255)
T ss_pred ccCC
Confidence 9975
No 18
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-51 Score=377.40 Aligned_cols=244 Identities=21% Similarity=0.291 Sum_probs=219.3
Q ss_pred CceEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHH
Q 018632 34 NQVLVE-GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 34 ~~v~~~-~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
..+.++ .+++|++||||||++.|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++... +...
T Consensus 6 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~ 81 (256)
T PRK06143 6 AHAGVTRDDRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL----DQAS 81 (256)
T ss_pred ccceeeecCCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc----Chhh
Confidence 346667 468899999999999999999999999999999999999988 888 799999999987542 2223
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
...+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |++|++++|++++|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a 160 (256)
T PRK06143 82 AEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWART 160 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHH
Confidence 3445566677888999999999999999999999999999999999999999999999998 7888899999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|+++|+.++|+||+++||||+|+|++++.+.+.
T Consensus 161 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 195 (256)
T PRK06143 161 RWLLLTGETIDAAQALAWGLVDRVVPLAELDAAVE--------------------------------------------- 195 (256)
T ss_pred HHHHHcCCcCCHHHHHHCCCcCeecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999888765443
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|+.+||.+++.+|++++......+.++++.|...+...+. ++|++||+++
T Consensus 196 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~e~~~a 250 (256)
T PRK06143 196 ----------------------RLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL---TGEPQRHMAA 250 (256)
T ss_pred ----------------------HHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHH
Confidence 448999999999999999999988888999999999999988887 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 251 f~ekr~ 256 (256)
T PRK06143 251 FLNRKR 256 (256)
T ss_pred HHhhcC
Confidence 999975
No 19
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.2e-51 Score=380.07 Aligned_cols=248 Identities=21% Similarity=0.275 Sum_probs=222.1
Q ss_pred ceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHH
Q 018632 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKD 110 (353)
Q Consensus 35 ~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 110 (353)
.+.++.+++|++|+||||++.|+++.+|+.+|.++++.++.|+++++ |.|++||+|+|++++.......+......
T Consensus 18 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~ 97 (277)
T PRK08258 18 HFLWEVDDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLA 97 (277)
T ss_pred ceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHH
Confidence 58899999999999999999999999999999999999999999987 88999999999998753211112223334
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCccccc-CccHHHHHhhcChHH-HHH
Q 018632 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 111 ~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p-~~g~~~~l~r~~g~~-a~~ 188 (353)
+...+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++| ++|++++|++++|.. +++
T Consensus 98 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~ 177 (277)
T PRK08258 98 FTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASE 177 (277)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHH
Confidence 555566788899999999999999999999999999999999999999999999999995 778999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
|+++|++++|+||+++||||+|+|++++++.+.
T Consensus 178 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 210 (277)
T PRK08258 178 LLYTGRSMSAEEGERWGFFNRLVEPEELLAEAQ----------------------------------------------- 210 (277)
T ss_pred HHHcCCCCCHHHHHHcCCCcEecCHHHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999887765433
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
+++++|++.||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|+
T Consensus 211 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~af~ 267 (277)
T PRK08258 211 --------------------ALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQ---TEDFRRAYEAFV 267 (277)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh
Confidence 448999999999999999999988888999999999999988887 999999999999
Q ss_pred ccCC
Q 018632 349 LNKH 352 (353)
Q Consensus 349 ~~~~ 352 (353)
++|+
T Consensus 268 ekr~ 271 (277)
T PRK08258 268 AKRK 271 (277)
T ss_pred cCCC
Confidence 9985
No 20
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-51 Score=377.51 Aligned_cols=249 Identities=23% Similarity=0.288 Sum_probs=219.3
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++ |+++++ |.|++||+|+|++++.........+..
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 81 (262)
T PRK08140 3 YETILLAIEAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLG 81 (262)
T ss_pred CceEEEEeECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhH
Confidence 346889999999999999999999999999999999999999 999888 999999999999987532100111111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
..+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~ 161 (262)
T PRK08140 82 ESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARAL 161 (262)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHH
Confidence 12222234577889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 162 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 195 (262)
T PRK08140 162 GLALLGEKLSAEQAEQWGLIWRVVDDAALADEAQ---------------------------------------------- 195 (262)
T ss_pred HHHHcCCCcCHHHHHHcCCccEeeChHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999888764333
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++++|++.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|
T Consensus 196 ---------------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af 251 (262)
T PRK08140 196 ---------------------QLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGR---SADYAEGVSAF 251 (262)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 448999999999999999999988888999999999999988887 99999999999
Q ss_pred eccCC
Q 018632 348 ILNKH 352 (353)
Q Consensus 348 l~~~~ 352 (353)
+++|+
T Consensus 252 ~~kr~ 256 (262)
T PRK08140 252 LEKRA 256 (262)
T ss_pred hcCCC
Confidence 99985
No 21
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.8e-51 Score=377.23 Aligned_cols=247 Identities=21% Similarity=0.317 Sum_probs=223.3
Q ss_pred CCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCCh
Q 018632 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKL 105 (353)
Q Consensus 32 ~~~~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~ 105 (353)
|.+.|.+++ +++|++|+||||++.|++|.+|+.+|.++++.++.|+++++ |.| ++||+|+|++++... +.
T Consensus 1 ~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~----~~ 76 (260)
T PRK07657 1 MLQNISVDYVTPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM----NE 76 (260)
T ss_pred CCceEEEEEccCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC----Ch
Confidence 345788886 78999999999999999999999999999999999999988 888 599999999987531 22
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH
Q 018632 106 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 185 (353)
Q Consensus 106 ~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~ 185 (353)
.....+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~ 156 (260)
T PRK07657 77 EQVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG 156 (260)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHH
Confidence 23344555667788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcC
Q 018632 186 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 264 (353)
Q Consensus 186 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+++|+++|++++|+||+++|||++|+|++++++.+.
T Consensus 157 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 193 (260)
T PRK07657 157 RAKELIYTGRRISAQEAKEIGLVEFVVPAHLLEEKAI------------------------------------------- 193 (260)
T ss_pred HHHHHHHhCCCCCHHHHHHcCCCCeecCHHHHHHHHH-------------------------------------------
Confidence 999999999999999999999999999888765443
Q ss_pred cCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 018632 265 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 344 (353)
Q Consensus 265 ~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi 344 (353)
+++++|+..+|.+++.+|++++.....++.++++.|...+...+. ++|++||+
T Consensus 194 ------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~ 246 (260)
T PRK07657 194 ------------------------EIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP---TKDRLEGL 246 (260)
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHhHHHHH
Confidence 348999999999999999999988888999999999999998887 99999999
Q ss_pred hheeccCC
Q 018632 345 NFQILNKH 352 (353)
Q Consensus 345 ~afl~~~~ 352 (353)
++|+++|+
T Consensus 247 ~af~~~r~ 254 (260)
T PRK07657 247 QAFKEKRK 254 (260)
T ss_pred HHHhcCCC
Confidence 99999985
No 22
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.4e-51 Score=375.85 Aligned_cols=248 Identities=21% Similarity=0.271 Sum_probs=224.2
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
..+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++..... .......
T Consensus 3 ~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~-~~~~~~~ 81 (260)
T PRK07511 3 AELLSRREGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRA-KPPSVQA 81 (260)
T ss_pred CeeEEEeECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhccc-ccchhHH
Confidence 457889999999999999999999999999999999999999999988 88999999999998764211 1223334
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
.+...+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 161 (260)
T PRK07511 82 ASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATE 161 (260)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHH
Confidence 4566777888999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
|+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 162 l~ltg~~~~a~eA~~~Glv~~vv~~~~~~~~a~----------------------------------------------- 194 (260)
T PRK07511 162 LLLEGKPISAERLHALGVVNRLAEPGQALAEAL----------------------------------------------- 194 (260)
T ss_pred HHHhCCCCCHHHHHHcCCccEeeCchHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999887654332
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
+++++|++.+|.+++.+|+.++.....++.++++.|...+...+. ++|+++|+++|+
T Consensus 195 --------------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~~f~ 251 (260)
T PRK07511 195 --------------------ALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLH---HADALEGIAAFL 251 (260)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHh
Confidence 348889999999999999999988888999999999999999887 999999999999
Q ss_pred ccCC
Q 018632 349 LNKH 352 (353)
Q Consensus 349 ~~~~ 352 (353)
++|+
T Consensus 252 ~~r~ 255 (260)
T PRK07511 252 EKRA 255 (260)
T ss_pred ccCC
Confidence 9986
No 23
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=5.2e-51 Score=376.41 Aligned_cols=246 Identities=27% Similarity=0.371 Sum_probs=222.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++ |.| ++||+|+|++++... +...
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~----~~~~ 78 (260)
T PRK05809 3 LKNVILEKEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDL----NEEE 78 (260)
T ss_pred cceEEEEEeCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhcc----ChHH
Confidence 3568899999999999999999999999999999999999999999988 888 999999999987542 1222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
...+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 158 (260)
T PRK05809 79 GRKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKA 158 (260)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 233444556788889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|+++|+.++|+||+++||||+|+|++++.+.+.
T Consensus 159 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 193 (260)
T PRK05809 159 KELIYTGDMINAEEALRIGLVNKVVEPEKLMEEAK--------------------------------------------- 193 (260)
T ss_pred HHHHHhCCCCCHHHHHHcCCCCcccChHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999887764333
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.+|.+++.+|++++.....++.++++.|.+.+...+. ++|++||+++
T Consensus 194 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~a 248 (260)
T PRK05809 194 ----------------------ALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS---TEDQTEGMTA 248 (260)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 458999999999999999999998888999999999999999987 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 249 f~~~r~ 254 (260)
T PRK05809 249 FVEKRE 254 (260)
T ss_pred HhcCCC
Confidence 999985
No 24
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.4e-51 Score=375.93 Aligned_cols=247 Identities=24% Similarity=0.283 Sum_probs=216.2
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
+.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++.......... ..
T Consensus 5 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~-~~ 83 (263)
T PRK07799 5 PHALVEQRGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDSFK-DG 83 (263)
T ss_pred ceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhccccchhh-hh
Confidence 458899999999999999999999999999999999999999999988 8899999999999876431100000 00
Q ss_pred HH-HHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 110 DF-FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 110 ~~-~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
.+ ...+.. +..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 84 ~~~~~~~~~-~~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 162 (263)
T PRK07799 84 SYDPSRIDA-LLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVAC 162 (263)
T ss_pred hhhhhHHHH-HHHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 01 112222 3346789999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|++||++++|+||+++||||+|+|++++.+.+.
T Consensus 163 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 196 (263)
T PRK07799 163 DLLLTGRHITAAEAKEIGLIGHVVPDGQALDKAL---------------------------------------------- 196 (263)
T ss_pred HHHHcCCCCCHHHHHHcCCccEecCcchHHHHHH----------------------------------------------
Confidence 9999999999999999999999999988764332
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++++|++.||.+++.+|++++.....++.++++.|...+...+. ++|++||+++|
T Consensus 197 ---------------------~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af 252 (263)
T PRK07799 197 ---------------------ELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFL---SEDAKEGPRAF 252 (263)
T ss_pred ---------------------HHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHH
Confidence 348999999999999999999988888999999999999988887 99999999999
Q ss_pred eccCC
Q 018632 348 ILNKH 352 (353)
Q Consensus 348 l~~~~ 352 (353)
+++|+
T Consensus 253 ~~~r~ 257 (263)
T PRK07799 253 AEKRA 257 (263)
T ss_pred HccCC
Confidence 99975
No 25
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.6e-51 Score=376.41 Aligned_cols=243 Identities=20% Similarity=0.187 Sum_probs=214.2
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHH
Q 018632 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDF 111 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 111 (353)
|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++....... ...+
T Consensus 1 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~----~~~~ 76 (255)
T PRK06563 1 VSRERRGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAG----GFPF 76 (255)
T ss_pred CeEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccc----hhhh
Confidence 4678899999999999999999999999999999999999999987 8999999999999875421111 1111
Q ss_pred HHHHHH-HHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHH
Q 018632 112 FRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 189 (353)
Q Consensus 112 ~~~~~~-l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l 189 (353)
.....+ +...+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|
T Consensus 77 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 156 (255)
T PRK06563 77 PEGGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRY 156 (255)
T ss_pred hhhhhHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHH
Confidence 111122 23357889999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHH
Q 018632 190 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 269 (353)
Q Consensus 190 ~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (353)
++||+.++|+||+++||||+|+|++++.+.+.
T Consensus 157 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------------ 188 (255)
T PRK06563 157 LLTGDEFDAQEALRLGLVQEVVPPGEQLERAI------------------------------------------------ 188 (255)
T ss_pred HHcCCCcCHHHHHHcCCCcEeeCHHHHHHHHH------------------------------------------------
Confidence 99999999999999999999999887764333
Q ss_pred HHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheec
Q 018632 270 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 349 (353)
Q Consensus 270 ~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~ 349 (353)
+++++|++.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|++
T Consensus 189 -------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~ 246 (255)
T PRK06563 189 -------------------ELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFT---SEDAKEGVQAFLE 246 (255)
T ss_pred -------------------HHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhc
Confidence 448999999999999999999988888999999999999988887 9999999999999
Q ss_pred cCC
Q 018632 350 NKH 352 (353)
Q Consensus 350 ~~~ 352 (353)
+|+
T Consensus 247 kr~ 249 (255)
T PRK06563 247 RRP 249 (255)
T ss_pred CCC
Confidence 985
No 26
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=7.9e-51 Score=375.96 Aligned_cols=247 Identities=20% Similarity=0.254 Sum_probs=221.8
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
..+.+.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++... .+.+.
T Consensus 9 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~ 85 (266)
T PRK08139 9 EAPLLLREDRDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA---RGLAY 85 (266)
T ss_pred cCCceEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcc---cchhH
Confidence 34578899999999999999999999999999999999999999999988 899999999999987542 12223
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
...++..+.+++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++ +++|++++|.. |
T Consensus 86 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A 164 (266)
T PRK08139 86 FRALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQA 164 (266)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHH
Confidence 344455667788899999999999999999999999999999999999999999999999999775 56799999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|+++|++++|+||+++||||+|+|++++++.+.
T Consensus 165 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~--------------------------------------------- 199 (266)
T PRK08139 165 MEMLLTGEFIDAATAREWGLVNRVVPADALDAAVA--------------------------------------------- 199 (266)
T ss_pred HHHHHcCCccCHHHHHHcCCccEeeChhHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999888765443
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++
T Consensus 200 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~a 254 (266)
T PRK08139 200 ----------------------RLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMM---AEDAEEGIDA 254 (266)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHH
Confidence 348999999999999999999998888999999999999888887 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 255 f~~kr~ 260 (266)
T PRK08139 255 FLEKRP 260 (266)
T ss_pred HhcCCC
Confidence 999975
No 27
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=5.9e-51 Score=375.16 Aligned_cols=245 Identities=24% Similarity=0.293 Sum_probs=217.1
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHH
Q 018632 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDF 111 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 111 (353)
|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+ +++ |.|++||+|+|++++.... ....+....+
T Consensus 1 ~~~e~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~ 78 (256)
T TIGR02280 1 ILSALEAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTP-GGAPDLGRTI 78 (256)
T ss_pred CeEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhcc-ccchhHHHHH
Confidence 457889999999999999999999999999999999999998 887 8899999999999875421 1111111122
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHH
Q 018632 112 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 190 (353)
Q Consensus 112 ~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ 190 (353)
...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus 79 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~ 158 (256)
T TIGR02280 79 ETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLA 158 (256)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHH
Confidence 22234577889999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHHH
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 270 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (353)
++|++++|+||+++|||++|+|++++.+.+.
T Consensus 159 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------------- 189 (256)
T TIGR02280 159 MLGEKLDARTAASWGLIWQVVDDAALMDEAQ------------------------------------------------- 189 (256)
T ss_pred HcCCCCCHHHHHHcCCcceeeChHHHHHHHH-------------------------------------------------
Confidence 9999999999999999999999888764433
Q ss_pred HHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheecc
Q 018632 271 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 350 (353)
Q Consensus 271 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~~ 350 (353)
+++++|++.||.+++.+|++++......+.++++.|...+...+. ++|++||+++|+++
T Consensus 190 ------------------~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~k 248 (256)
T TIGR02280 190 ------------------ALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGR---SADYAEGVTAFLDK 248 (256)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHHcC
Confidence 448999999999999999999988888999999999999988887 99999999999999
Q ss_pred CC
Q 018632 351 KH 352 (353)
Q Consensus 351 ~~ 352 (353)
|+
T Consensus 249 r~ 250 (256)
T TIGR02280 249 RN 250 (256)
T ss_pred CC
Confidence 85
No 28
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=6.8e-51 Score=378.28 Aligned_cols=247 Identities=24% Similarity=0.305 Sum_probs=218.0
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhc---CC----
Q 018632 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQ---GK---- 104 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~---~~---- 104 (353)
+..+.+++|++|+||||+++|++|.+|+.+|.++++.++.|+++++ |.|++||+|+|++++...... .+
T Consensus 10 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~ 89 (275)
T PLN02664 10 IQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGRS 89 (275)
T ss_pred EEecCCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchhh
Confidence 5555689999999999999999999999999999999999999988 999999999999987542110 01
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH
Q 018632 105 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 184 (353)
Q Consensus 105 ~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~ 184 (353)
.+....+...+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 169 (275)
T PLN02664 90 GERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGY 169 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCH
Confidence 11223334455677888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHh
Q 018632 185 L-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 262 (353)
Q Consensus 185 ~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
. |++|++||+.++|+||+++||||+|+|+ +++++...
T Consensus 170 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~~~----------------------------------------- 208 (275)
T PLN02664 170 GNAMELALTGRRFSGSEAKELGLVSRVFGSKEDLDEGVR----------------------------------------- 208 (275)
T ss_pred HHHHHHHHhCCCCCHHHHHHcCCCceeeCChhHHHHHHH-----------------------------------------
Confidence 9 9999999999999999999999999985 66654333
Q ss_pred cCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018632 263 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 342 (353)
Q Consensus 263 ~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 342 (353)
+++++|++.+|.+++.+|++++.....++.++++.|...+...+. ++|++|
T Consensus 209 --------------------------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e 259 (275)
T PLN02664 209 --------------------------LIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLV---SDDLNE 259 (275)
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc---ChhHHH
Confidence 458999999999999999999988888999999999988887776 999999
Q ss_pred hhhheeccCC
Q 018632 343 VSNFQILNKH 352 (353)
Q Consensus 343 gi~afl~~~~ 352 (353)
|+++|+++|+
T Consensus 260 g~~af~ekr~ 269 (275)
T PLN02664 260 AVSAQIQKRK 269 (275)
T ss_pred HHHHHhccCC
Confidence 9999999985
No 29
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=5.6e-51 Score=374.04 Aligned_cols=238 Identities=24% Similarity=0.316 Sum_probs=216.4
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CC-CCCcccCcchhhHHHhhhcCChHHHHHHHHHH
Q 018632 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 115 (353)
Q Consensus 41 ~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 115 (353)
+++|++||||||+++|+||.+|+.+|.++++.++.|++|++ |. |++||+|+|++++... .......+...+
T Consensus 2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~ 77 (251)
T PLN02600 2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM----SPSEVQKFVNSL 77 (251)
T ss_pred CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHH
Confidence 57899999999999999999999999999999999999987 76 5899999999987542 122334455666
Q ss_pred HHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHHhcCC
Q 018632 116 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA 194 (353)
Q Consensus 116 ~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltG~ 194 (353)
..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|++||+
T Consensus 78 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~ 157 (251)
T PLN02600 78 RSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGR 157 (251)
T ss_pred HHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCC
Confidence 7788899999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHHHHHHH
Q 018632 195 KLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDS 274 (353)
Q Consensus 195 ~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 274 (353)
.++|+||+++||||+|+|++++.+.+.
T Consensus 158 ~~~a~eA~~~Glv~~vv~~~~~~~~a~----------------------------------------------------- 184 (251)
T PLN02600 158 RIGAREAASMGLVNYCVPAGEAYEKAL----------------------------------------------------- 184 (251)
T ss_pred ccCHHHHHHcCCCcEeeChhHHHHHHH-----------------------------------------------------
Confidence 999999999999999999888764332
Q ss_pred HHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheeccCC
Q 018632 275 LESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 352 (353)
Q Consensus 275 l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~~~~ 352 (353)
+++++|++.+|.+++.+|++++.....++.+.++.|...+..++. ++|++||+++|+++|+
T Consensus 185 --------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~ 245 (251)
T PLN02600 185 --------------ELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLK---TKDRLEGLAAFAEKRK 245 (251)
T ss_pred --------------HHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcCCC
Confidence 458999999999999999999988888999999999999999887 9999999999999985
No 30
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.3e-51 Score=375.33 Aligned_cols=244 Identities=23% Similarity=0.299 Sum_probs=220.8
Q ss_pred ceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHH
Q 018632 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKD 110 (353)
Q Consensus 35 ~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 110 (353)
.+.++++++|++||||||++ |++|.+|+.+|.++++.++.|++|++ |.|++||+|.|++++... ........
T Consensus 3 ~i~~~~~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~~ 78 (257)
T PRK07658 3 FLSVRVEDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSV---TEAEQATE 78 (257)
T ss_pred eEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcc---CchhhHHH
Confidence 67889999999999999985 99999999999999999999999988 889999999999987542 11122333
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHH
Q 018632 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 189 (353)
Q Consensus 111 ~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l 189 (353)
+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|
T Consensus 79 ~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 158 (257)
T PRK07658 79 LAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEM 158 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHH
Confidence 445566788899999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHH
Q 018632 190 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 269 (353)
Q Consensus 190 ~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (353)
+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 159 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------------ 190 (257)
T PRK07658 159 MLTSEPITGAEALKWGLVNGVFPEETLLDDAK------------------------------------------------ 190 (257)
T ss_pred HHcCCCcCHHHHHHcCCcCeecChhHHHHHHH------------------------------------------------
Confidence 99999999999999999999999888764333
Q ss_pred HHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheec
Q 018632 270 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 349 (353)
Q Consensus 270 ~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~ 349 (353)
+++++|++.+|.+++.+|++++.....++.++++.|...+...+. ++|++||+++|++
T Consensus 191 -------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~~ 248 (257)
T PRK07658 191 -------------------KLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFT---SEDAKEGVQAFLE 248 (257)
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHc
Confidence 458999999999999999999988888999999999999999887 9999999999999
Q ss_pred cCC
Q 018632 350 NKH 352 (353)
Q Consensus 350 ~~~ 352 (353)
+|+
T Consensus 249 kr~ 251 (257)
T PRK07658 249 KRK 251 (257)
T ss_pred CCC
Confidence 975
No 31
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-51 Score=373.74 Aligned_cols=242 Identities=23% Similarity=0.278 Sum_probs=214.3
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
.+.+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++... .....
T Consensus 2 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~- 77 (254)
T PRK08252 2 SDEVLVERRGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARG---ERPSI- 77 (254)
T ss_pred CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcc---cchhh-
Confidence 4568899999999999999999999999999999999999999999887 899999999999987642 11111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
....+..+. ...+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 78 --~~~~~~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~ 153 (254)
T PRK08252 78 --PGRGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAM 153 (254)
T ss_pred --hHHHHHHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHH
Confidence 111122222 1469999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 154 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 187 (254)
T PRK08252 154 ELALTGDMLTAERAHELGLVNRLTEPGQALDAAL---------------------------------------------- 187 (254)
T ss_pred HHHHcCCccCHHHHHHcCCcceecCcchHHHHHH----------------------------------------------
Confidence 9999999999999999999999999888764333
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++++|++.||.+++.+|++++.....++.++++.|...+...+. ++|++||+++|
T Consensus 188 ---------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~eg~~af 243 (254)
T PRK08252 188 ---------------------ELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFT---SADAKEGATAF 243 (254)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHH
Confidence 458999999999999999999988888899999999999988887 99999999999
Q ss_pred eccCC
Q 018632 348 ILNKH 352 (353)
Q Consensus 348 l~~~~ 352 (353)
+++|+
T Consensus 244 ~~kr~ 248 (254)
T PRK08252 244 AEKRA 248 (254)
T ss_pred hcCCC
Confidence 99875
No 32
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-50 Score=374.19 Aligned_cols=243 Identities=26% Similarity=0.359 Sum_probs=219.0
Q ss_pred CceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 34 NQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 34 ~~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
+.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++... .. .
T Consensus 7 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~---~ 80 (261)
T PRK08138 7 DVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA---GA---I 80 (261)
T ss_pred CCEEEEEccCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhcc---ch---h
Confidence 4577787 78899999999999999999999999999999999999987 889999999999987542 11 1
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
..+...+.+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 81 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 160 (261)
T PRK08138 81 EMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAM 160 (261)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHHH
Confidence 22334456778889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|+.++|+||+++||||+|+|++++.+.+.
T Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 194 (261)
T PRK08138 161 RMALTGCMVPAPEALAIGLVSEVVEDEQTLPRAL---------------------------------------------- 194 (261)
T ss_pred HHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999888764333
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++++|++.+|.+++.+|++++.....++.++++.|.+.+...+. ++|+++|+++|
T Consensus 195 ---------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~af 250 (261)
T PRK08138 195 ---------------------ELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD---SEDQKEGMDAF 250 (261)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence 348889999999999999999988888999999999999998887 99999999999
Q ss_pred eccCC
Q 018632 348 ILNKH 352 (353)
Q Consensus 348 l~~~~ 352 (353)
+++|+
T Consensus 251 ~~kr~ 255 (261)
T PRK08138 251 LEKRK 255 (261)
T ss_pred hcCCC
Confidence 99985
No 33
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-50 Score=373.69 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=221.3
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC-Cccc----CCCCCcccCcchhhHHHhhhcC--Ch
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDP-NIGF----GSGRAFCAGGDIVSLYHFMNQG--KL 105 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~-~v~v----g~g~~F~aG~Dl~~~~~~~~~~--~~ 105 (353)
++.+.++++++|++|+||||+++|++|.+|+.+|.++++.++.|+ +|++ |.|++||+|+|++++....... ..
T Consensus 3 ~~~v~~~~~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (266)
T PRK05981 3 FKKVTLDFDGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGG 82 (266)
T ss_pred cceEEEEeECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccc
Confidence 456889999999999999999999999999999999999999876 4887 8899999999999875421100 01
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH
Q 018632 106 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 185 (353)
Q Consensus 106 ~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~ 185 (353)
.....+...+..++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~ 162 (266)
T PRK05981 83 DAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKA 162 (266)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHH
Confidence 11223444566788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcC
Q 018632 186 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 264 (353)
Q Consensus 186 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+++|+++|+.++|+||+++|||++|+|++++.+.+.
T Consensus 163 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~------------------------------------------- 199 (266)
T PRK05981 163 RAMELSLLGEKLPAETALQWGLVNRVVDDAELMAEAM------------------------------------------- 199 (266)
T ss_pred HHHHHHHhCCCcCHHHHHHcCCceEeeCHhHHHHHHH-------------------------------------------
Confidence 999999999999999999999999999888764333
Q ss_pred cCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 018632 265 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 344 (353)
Q Consensus 265 ~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi 344 (353)
+++++|++.+|.+++.+|++++.....++.+.++.|...+...+. ++|++||+
T Consensus 200 ------------------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~ 252 (266)
T PRK05981 200 ------------------------KLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGK---TEDFKEGV 252 (266)
T ss_pred ------------------------HHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhc---ChhHHHHH
Confidence 448899999999999999999988888999999999999888887 99999999
Q ss_pred hheeccCC
Q 018632 345 NFQILNKH 352 (353)
Q Consensus 345 ~afl~~~~ 352 (353)
.+|+++|+
T Consensus 253 ~af~~kr~ 260 (266)
T PRK05981 253 GAFLQKRP 260 (266)
T ss_pred HHHhcCCC
Confidence 99999986
No 34
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-50 Score=372.15 Aligned_cols=244 Identities=21% Similarity=0.272 Sum_probs=221.0
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
+.+.++.+++|++||||||++.|++|.+|+.+|.++++.+ .|+++++ |.|++||+|+|++++... ...+...
T Consensus 6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~ 81 (260)
T PRK07659 6 ESVVVKYEGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSS---NDESKFD 81 (260)
T ss_pred ceEEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhc---cCchhHH
Confidence 4689999999999999999999999999999999999999 5888887 889999999999987542 1222334
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
.+...+.+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~ 161 (260)
T PRK07659 82 GVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQ 161 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHH
Confidence 5566677888899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
|+++|+.++|+||+++||||+++ ++++.+.+.
T Consensus 162 l~ltg~~~~a~eA~~~Glv~~vv-~~~~~~~a~----------------------------------------------- 193 (260)
T PRK07659 162 IIWEGKKLSATEALDLGLIDEVI-GGDFQTAAK----------------------------------------------- 193 (260)
T ss_pred HHHhCCccCHHHHHHcCChHHHh-hhHHHHHHH-----------------------------------------------
Confidence 99999999999999999999999 667654333
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
+++++|++.||.+++.+|++++.....++.+.++.|.+.+...+. ++|++||+.+|+
T Consensus 194 --------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~ 250 (260)
T PRK07659 194 --------------------QKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQ---TADHKEGIRAFL 250 (260)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHh
Confidence 448999999999999999999988888999999999999988887 999999999999
Q ss_pred ccCC
Q 018632 349 LNKH 352 (353)
Q Consensus 349 ~~~~ 352 (353)
++|+
T Consensus 251 ~kr~ 254 (260)
T PRK07659 251 EKRL 254 (260)
T ss_pred cCCC
Confidence 9985
No 35
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.5e-50 Score=372.24 Aligned_cols=248 Identities=22% Similarity=0.307 Sum_probs=217.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++....... ....
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (262)
T PRK05995 3 YETLEIEQRGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYS-DDEN 81 (262)
T ss_pred CceEEEEeeCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccC-chhh
Confidence 3468899999999999999999999999999999999999999999987 8999999999999875421111 1111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
......+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++ +++++|.. ++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~ 160 (262)
T PRK05995 82 RADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAAR 160 (262)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHH
Confidence 22234556788889999999999999999999999999999999999999999999999999887764 88999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 194 (262)
T PRK05995 161 RYFLTAERFDAAEALRLGLVHEVVPAEALDAKVD---------------------------------------------- 194 (262)
T ss_pred HHHHcCCccCHHHHHHcCCCCeecCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999887765443
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~-l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.||.+++.+|++++.....++.+. ++.|...+...+. ++|++||+++
T Consensus 195 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~a 250 (262)
T PRK05995 195 ---------------------ELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA---TEEAREGVAA 250 (262)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 34899999999999999999998878888888 8888888888777 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 251 f~~kr~ 256 (262)
T PRK05995 251 FLEKRK 256 (262)
T ss_pred HhcCCC
Confidence 999985
No 36
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-50 Score=371.45 Aligned_cols=243 Identities=22% Similarity=0.316 Sum_probs=216.9
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
|++.+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++..... +.
T Consensus 1 m~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~--~~-- 76 (249)
T PRK05870 1 MMDPVLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPG--RP-- 76 (249)
T ss_pred CCccEEEEccCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhcccc--cc--
Confidence 45668899999999999999999999999999999999999999999987 99999999999998764211 11
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
.......+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a 156 (249)
T PRK05870 77 AEDGLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVA 156 (249)
T ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHH
Confidence 122344455677788999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|++||++++|+||+++||||+++ +++.+.+.
T Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv--~~l~~~a~--------------------------------------------- 189 (249)
T PRK05870 157 RAALLFGMRFDAEAAVRHGLALMVA--DDPVAAAL--------------------------------------------- 189 (249)
T ss_pred HHHHHhCCccCHHHHHHcCCHHHHH--hhHHHHHH---------------------------------------------
Confidence 9999999999999999999999999 45554333
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRLISGDFYEVSN 345 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~-~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~ 345 (353)
+++++|++.+|.+++.+|++++.... .+++++++.|...+...+. ++|++||++
T Consensus 190 ----------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~ 244 (249)
T PRK05870 190 ----------------------ELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ---SPEFAARLA 244 (249)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc---ChhHHHHHH
Confidence 45899999999999999999998877 8899999999999988887 999999999
Q ss_pred heecc
Q 018632 346 FQILN 350 (353)
Q Consensus 346 afl~~ 350 (353)
+|+++
T Consensus 245 af~~~ 249 (249)
T PRK05870 245 AAQRR 249 (249)
T ss_pred HHhcC
Confidence 99974
No 37
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.1e-50 Score=370.85 Aligned_cols=243 Identities=25% Similarity=0.300 Sum_probs=212.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
++.|.++++++|++|+||||++.|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++.... ....
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~---~~~~ 79 (259)
T PRK06494 3 LPFSTVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGG---KRGW 79 (259)
T ss_pred CceeEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcC---cchh
Confidence 4568899999999999999999999999999999999999999999987 887 7999999999875421 1111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
. ...+..+ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 80 ~---~~~~~~~-~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a 155 (259)
T PRK06494 80 P---ESGFGGL-TSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRA 155 (259)
T ss_pred h---hHHHHHH-HHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHH
Confidence 1 1112223 334589999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|+++|+.++|+||+++||||+++|++++.+.+.
T Consensus 156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~--------------------------------------------- 190 (259)
T PRK06494 156 MGMILTGRRVTAREGLELGFVNEVVPAGELLAAAE--------------------------------------------- 190 (259)
T ss_pred HHHHHcCCcCCHHHHHHcCCCcEecCHhHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999887765433
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHH--HHHHHHhhhcCCCCChhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE--YRMSLQGVSRLISGDFYEVS 344 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e--~~~~~~~~~~~~~~d~~egi 344 (353)
+++++|++.||.+++.+|++++.....+++++++.| ...+...+. ++|++||+
T Consensus 191 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~d~~eg~ 245 (259)
T PRK06494 191 ----------------------RWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRA---SQDYIEGP 245 (259)
T ss_pred ----------------------HHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc---CccHHHHH
Confidence 448999999999999999999988888999999998 456667676 99999999
Q ss_pred hheeccCC
Q 018632 345 NFQILNKH 352 (353)
Q Consensus 345 ~afl~~~~ 352 (353)
++|+++|+
T Consensus 246 ~af~~kr~ 253 (259)
T PRK06494 246 KAFAEKRP 253 (259)
T ss_pred HHHHccCC
Confidence 99999875
No 38
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-50 Score=370.08 Aligned_cols=241 Identities=22% Similarity=0.281 Sum_probs=213.7
Q ss_pred CceEEEEeCC---EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChH
Q 018632 34 NQVLVEGKAN---SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLE 106 (353)
Q Consensus 34 ~~v~~~~~~~---v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~ 106 (353)
+.|.++++++ |++||||||++.|++|.+|+.+|.++++.++.|+++++ |.|++||+|.|++++.... . +.
T Consensus 3 ~~i~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~-~-~~- 79 (251)
T PRK06023 3 DHILVERPGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAA-M-GG- 79 (251)
T ss_pred ceEEEEeecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhcc-c-cc-
Confidence 3588888774 99999999999999999999999999999999999988 9999999999999875421 1 11
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-
Q 018632 107 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 185 (353)
Q Consensus 107 ~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~- 185 (353)
..+...+.+++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|..
T Consensus 80 --~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~ 157 (251)
T PRK06023 80 --TSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQR 157 (251)
T ss_pred --hhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHH
Confidence 12333455678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCc
Q 018632 186 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 265 (353)
Q Consensus 186 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (353)
+++++++|+.++|+||+++|||++|+|++++.+.+.
T Consensus 158 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 193 (251)
T PRK06023 158 AFALLALGEGFSAEAAQEAGLIWKIVDEEAVEAETL-------------------------------------------- 193 (251)
T ss_pred HHHHHHhCCCCCHHHHHHcCCcceeeCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999888765433
Q ss_pred CCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018632 266 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 345 (353)
Q Consensus 266 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~ 345 (353)
+++++|++.||.+++.+|++++... ..+.+.++.|...+...+. ++|++||++
T Consensus 194 -----------------------~~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~---~~~~~e~~~ 246 (251)
T PRK06023 194 -----------------------KAAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLK---SAEARAAFE 246 (251)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 4489999999999999999998663 4688999989888888887 999999999
Q ss_pred heecc
Q 018632 346 FQILN 350 (353)
Q Consensus 346 afl~~ 350 (353)
+|+++
T Consensus 247 af~e~ 251 (251)
T PRK06023 247 AFMRR 251 (251)
T ss_pred HHhcC
Confidence 99874
No 39
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.4e-50 Score=370.43 Aligned_cols=248 Identities=19% Similarity=0.237 Sum_probs=215.9
Q ss_pred CCceEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 33 ~~~v~~~~~-~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
++.+.++++ ++|++|+||||++.|++|.+|+.+|.++++.++.|+++++ |.|++||+|+|++++...... +...
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~ 81 (262)
T PRK07468 3 FETIRIAVDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA-DRAT 81 (262)
T ss_pred cceEEEEEcCCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhccc-chhh
Confidence 345788875 6899999999999999999999999999999999999887 889999999999987542111 1111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
.......+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++ +++|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~-~~vG~~~a 160 (262)
T PRK07468 82 RIEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVV-ARMGEANA 160 (262)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHH-hhccHHHH
Confidence 12233445668889999999999999999999999999999999999999999999999999999999855 558998 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|+++|++++|+||+++|||++|+|++++++.+.
T Consensus 161 ~~lll~g~~~~a~eA~~~Glv~~v~~~~~l~~~~~--------------------------------------------- 195 (262)
T PRK07468 161 RRVFMSARLFDAEEAVRLGLLSRVVPAERLDAAVE--------------------------------------------- 195 (262)
T ss_pred HHHHHhCCccCHHHHHHcCCcceecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999877764433
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.+|.+++.+|++++......+.++++.|...+...+. ++|++||+++
T Consensus 196 ----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~a 250 (262)
T PRK07468 196 ----------------------AEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE---TEEAREGIAA 250 (262)
T ss_pred ----------------------HHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 348999999999999999999877666789999999999888887 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 251 f~~kr~ 256 (262)
T PRK07468 251 FFDKRA 256 (262)
T ss_pred HHcCCC
Confidence 999985
No 40
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4e-50 Score=372.86 Aligned_cols=250 Identities=26% Similarity=0.325 Sum_probs=218.3
Q ss_pred CCceEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChH-
Q 018632 33 CNQVLVEGKA-NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLE- 106 (353)
Q Consensus 33 ~~~v~~~~~~-~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~- 106 (353)
++.|.+++++ +|++||||||++.|+||.+|+.+|.++++.++.|+++++ |.|++||+|+|++++..........
T Consensus 4 ~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~ 83 (272)
T PRK06210 4 YDAVLYEVADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRD 83 (272)
T ss_pred cceEEEEECCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCccccccc
Confidence 4568899998 999999999999999999999999999999999999987 8899999999999875421100000
Q ss_pred -HHHHH----HHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhc
Q 018632 107 -ECKDF----FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 181 (353)
Q Consensus 107 -~~~~~----~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~ 181 (353)
....+ ...+.+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 163 (272)
T PRK06210 84 TDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRL 163 (272)
T ss_pred ccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhh
Confidence 00111 1123456778899999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHH
Q 018632 182 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 260 (353)
Q Consensus 182 ~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
+|.. +++|++||+.++|+||+++||||+|+|++++.+.+.
T Consensus 164 ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------- 204 (272)
T PRK06210 164 VGHANALDLLLSARTFYAEEALRLGLVNRVVPPDELMERTL--------------------------------------- 204 (272)
T ss_pred hCHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHH---------------------------------------
Confidence 9999 999999999999999999999999999877764333
Q ss_pred HhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhc-CchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCC
Q 018632 261 KCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 339 (353)
Q Consensus 261 ~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~-~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d 339 (353)
+++++|+++ +|.++..+|++++.....++.++++.|...+...+. ++|
T Consensus 205 ----------------------------~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~ 253 (272)
T PRK06210 205 ----------------------------AYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQ---RPD 253 (272)
T ss_pred ----------------------------HHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhc---Ccc
Confidence 348899985 999999999999988888999999999999888887 999
Q ss_pred hhhhhhheeccCC
Q 018632 340 FYEVSNFQILNKH 352 (353)
Q Consensus 340 ~~egi~afl~~~~ 352 (353)
++||+++|+++|+
T Consensus 254 ~~egi~af~~kr~ 266 (272)
T PRK06210 254 FIEGVASFLEKRP 266 (272)
T ss_pred HHHHHHHHhccCC
Confidence 9999999999986
No 41
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.3e-50 Score=369.65 Aligned_cols=246 Identities=26% Similarity=0.363 Sum_probs=223.2
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
+...+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++ |.|++||+|+|++++.... ...
T Consensus 3 ~~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~---~~~- 78 (259)
T PRK06688 3 MVTDLLVELEDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAP---PKP- 78 (259)
T ss_pred CCCceEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccC---cch-
Confidence 34468899999999999999999999999999999999999999999988 8889999999999886531 111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
..+...+.+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +
T Consensus 79 -~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a 157 (259)
T PRK06688 79 -PDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARA 157 (259)
T ss_pred -HHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHH
Confidence 33455667788899999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
.+++++|++++|+||+++||||+|+|++++.+.+.
T Consensus 158 ~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~--------------------------------------------- 192 (259)
T PRK06688 158 AEMLLLGEPLSAEEALRIGLVNRVVPAAELDAEAD--------------------------------------------- 192 (259)
T ss_pred HHHHHhCCccCHHHHHHcCCcceecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999877764333
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.+|.+++.+|++++.....+++++++.|...+...+. ++|+++|+++
T Consensus 193 ----------------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~a 247 (259)
T PRK06688 193 ----------------------AQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLR---TPDFREGATA 247 (259)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 348899999999999999999998888999999999999999887 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 248 f~~~~~ 253 (259)
T PRK06688 248 FIEKRK 253 (259)
T ss_pred HHcCCC
Confidence 999875
No 42
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6e-50 Score=372.13 Aligned_cols=253 Identities=20% Similarity=0.260 Sum_probs=215.4
Q ss_pred cCCCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcC-
Q 018632 30 DDLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQG- 103 (353)
Q Consensus 30 ~~~~~~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~- 103 (353)
...++.|.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++.......
T Consensus 5 ~~~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~ 84 (276)
T PRK05864 5 RSTMSLVLVDHPRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEG 84 (276)
T ss_pred CCCCCceEEeeecCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhccccccc
Confidence 44555688887 78999999999999999999999999999999999999987 8899999999999874311000
Q ss_pred --ChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCccccc-CccHHHHHhh
Q 018632 104 --KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSH 180 (353)
Q Consensus 104 --~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p-~~g~~~~l~r 180 (353)
.......+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++| ++|++++|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~ 164 (276)
T PRK05864 85 LTRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPR 164 (276)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHh
Confidence 1111222344556778889999999999999999999999999999999999999999999999997 7888999999
Q ss_pred cChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHH
Q 018632 181 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIV 259 (353)
Q Consensus 181 ~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (353)
++|.. |++|+++|++++|+||+++|||++|+|++++.+.+.
T Consensus 165 ~vG~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------- 206 (276)
T PRK05864 165 AIGSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDEQLLDTCY-------------------------------------- 206 (276)
T ss_pred hhCHHHHHHHHHcCCccCHHHHHHcCCcceeeCHHHHHHHHH--------------------------------------
Confidence 99999 999999999999999999999999999888764433
Q ss_pred HHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHHH-HhhhcCCC
Q 018632 260 DKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMSL-QGVSRLIS 337 (353)
Q Consensus 260 ~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~-~~~~~l~~e~~~~~-~~~~~~~~ 337 (353)
+++++|+..||.+++.+|++++..... +++++++.|..... ..+. +
T Consensus 207 -----------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~---~ 254 (276)
T PRK05864 207 -----------------------------AIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLL---T 254 (276)
T ss_pred -----------------------------HHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhcc---C
Confidence 448999999999999999999877665 78888887765322 2344 9
Q ss_pred CChhhhhhheeccCC
Q 018632 338 GDFYEVSNFQILNKH 352 (353)
Q Consensus 338 ~d~~egi~afl~~~~ 352 (353)
+|++||+++|+++|+
T Consensus 255 ~d~~e~~~af~~kr~ 269 (276)
T PRK05864 255 ANFEEAVAARAEKRP 269 (276)
T ss_pred hhHHHHHHHHhccCC
Confidence 999999999999985
No 43
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=4.5e-50 Score=370.72 Aligned_cols=248 Identities=21% Similarity=0.225 Sum_probs=213.2
Q ss_pred CCceEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 33 ~~~v~~~~~-~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
++.+.++++ ++|++||||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++.... ..+...
T Consensus 4 ~~~l~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~-~~~~~~ 82 (265)
T PRK05674 4 FQTIELIRDPRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSA-DLDYNT 82 (265)
T ss_pred cceEEEEEcCCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcc-cccchh
Confidence 456888885 7899999999999999999999999999999999999998 9999999999999875321 101111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
.......+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++ ++++++|.. +
T Consensus 83 ~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~~~a 161 (265)
T PRK05674 83 NLDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGERAA 161 (265)
T ss_pred hhHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCHHHH
Confidence 11223345677888999999999999999999999999999999999999999999999999988766 488999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|++||+.++|+||+++|||++|+|++++.+.+.
T Consensus 162 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 196 (265)
T PRK05674 162 RRYALTAERFDGRRARELGLLAESYPAAELEAQVE--------------------------------------------- 196 (265)
T ss_pred HHHHHhCcccCHHHHHHCCCcceecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999887765433
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHH-HHHHHHhhhcCCCCChhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE-YRMSLQGVSRLISGDFYEVSN 345 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e-~~~~~~~~~~~~~~d~~egi~ 345 (353)
+.+++|+++||.+++.+|++++.....++.++++.+ ...+...+. ++|++||++
T Consensus 197 ----------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~e~~~ 251 (265)
T PRK05674 197 ----------------------AWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIRV---SAEGQEGLR 251 (265)
T ss_pred ----------------------HHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 348999999999999999999998888888887753 455566665 999999999
Q ss_pred heeccCC
Q 018632 346 FQILNKH 352 (353)
Q Consensus 346 afl~~~~ 352 (353)
+|+++|+
T Consensus 252 af~~kr~ 258 (265)
T PRK05674 252 AFLEKRT 258 (265)
T ss_pred HHHccCC
Confidence 9999986
No 44
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=5.9e-50 Score=369.42 Aligned_cols=244 Identities=20% Similarity=0.281 Sum_probs=214.1
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
++.+.++++++|++||||||+ .|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++... ....
T Consensus 2 ~~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~---~~~~- 76 (261)
T PRK03580 2 SESLHTTRNGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEG---EAPD- 76 (261)
T ss_pred CceEEEEEECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhcc---Ccch-
Confidence 446899999999999999995 599999999999999999999999987 877 799999999987542 1111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
..+.......+.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 -~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a 155 (261)
T PRK03580 77 -ADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIA 155 (261)
T ss_pred -hhhhhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHH
Confidence 11222223456788899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++++++|+.++|+||+++|||++|+|++++.+.+.
T Consensus 156 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 190 (261)
T PRK03580 156 NEMVMTGRRMDAEEALRWGIVNRVVPQAELMDRAR--------------------------------------------- 190 (261)
T ss_pred HHHHHhCCccCHHHHHHcCCCcEecCHhHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999888765443
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHH----HHHHhhhcCCCCChhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYR----MSLQGVSRLISGDFYE 342 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~----~~~~~~~~~~~~d~~e 342 (353)
+++++|++.+|.+++.+|++++.....+++++++.|.. .+..++. ++|++|
T Consensus 191 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~d~~e 245 (261)
T PRK03580 191 ----------------------ELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLH---SEDALE 245 (261)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhc---CccHHH
Confidence 34899999999999999999998888899999998874 5556665 999999
Q ss_pred hhhheeccCC
Q 018632 343 VSNFQILNKH 352 (353)
Q Consensus 343 gi~afl~~~~ 352 (353)
|+++|+++|+
T Consensus 246 ~~~af~ekr~ 255 (261)
T PRK03580 246 GPRAFAEKRD 255 (261)
T ss_pred HHHHHhcCCC
Confidence 9999999985
No 45
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4e-50 Score=368.83 Aligned_cols=244 Identities=23% Similarity=0.231 Sum_probs=212.4
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
|++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++ |.|++||+|+|++++.... . ..
T Consensus 1 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~---~-~~ 76 (254)
T PRK08259 1 MSMSVRVERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGR---G-NR 76 (254)
T ss_pred CCceEEEEEECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhccc---c-hh
Confidence 45668999999999999999999999999999999999999999999988 8899999999999875421 1 11
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
.... ....+...+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|.+|++++|++++|.. +
T Consensus 77 ~~~~--~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a 154 (254)
T PRK08259 77 LHPS--GDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRA 154 (254)
T ss_pred hhhh--hcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 1100 011112233479999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|+++|+.++|+||+++||||+|+|++++.+.+.
T Consensus 155 ~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 189 (254)
T PRK08259 155 MDLILTGRPVDADEALAIGLANRVVPKGQARAAAE--------------------------------------------- 189 (254)
T ss_pred HHHHHcCCccCHHHHHHcCCCCEeeChhHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999988765443
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.||.+++.+|++++.....+++++++.|...+...+ .+|++||+++
T Consensus 190 ----------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~----~~d~~egi~a 243 (254)
T PRK08259 190 ----------------------ELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL----AAEALEGAAR 243 (254)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH----hhHHHHHHHH
Confidence 34899999999999999999998888899999999988776655 3999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|.
T Consensus 244 f~~~~~ 249 (254)
T PRK08259 244 FAAGAG 249 (254)
T ss_pred HHhhhc
Confidence 999864
No 46
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=7.9e-50 Score=367.45 Aligned_cols=242 Identities=18% Similarity=0.188 Sum_probs=206.5
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHHH
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
+.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++... .+. .
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~---~~~--~ 76 (256)
T TIGR03210 2 EDILYEKRNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG---YDG--R 76 (256)
T ss_pred CceEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc---ccc--h
Confidence 458889999999999999999999999999999999999999999987 887 799999999987431 111 1
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
..+...+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|.. |+
T Consensus 77 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~ 156 (256)
T TIGR03210 77 GTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAR 156 (256)
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHH
Confidence 11223345678889999999999999999999999999999999999999999999999998888899999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 157 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 190 (256)
T TIGR03210 157 EIWYLCRRYTAQEALAMGLVNAVVPHDQLDAEVQ---------------------------------------------- 190 (256)
T ss_pred HHHHhCCCcCHHHHHHcCCceeeeCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999887765443
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCH-HHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTF-DECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~-~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.||.+++.+|++++....... .+.+ |...+...+. ++|++||+++
T Consensus 191 ---------------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~--~~~~~~~~~~---~~d~~e~~~a 244 (256)
T TIGR03210 191 ---------------------KWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAGM--GMYALKLYYD---TAESREGVKA 244 (256)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHhhcccchHHHH--HHHHHHHHcc---ChhHHHHHHH
Confidence 44899999999999999999987644321 1122 3345555555 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 245 f~~kr~ 250 (256)
T TIGR03210 245 FQEKRK 250 (256)
T ss_pred HhccCC
Confidence 999986
No 47
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=1.3e-49 Score=367.57 Aligned_cols=247 Identities=22% Similarity=0.269 Sum_probs=216.0
Q ss_pred CCCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCCh
Q 018632 31 DLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKL 105 (353)
Q Consensus 31 ~~~~~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~ 105 (353)
...+.|.++. +++|++||||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++.... ....
T Consensus 6 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~ 84 (265)
T PLN02888 6 VSENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVF-KGDV 84 (265)
T ss_pred CCCCeEEEEeccCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhc-cchh
Confidence 3344678885 78999999999999999999999999999999999999988 8899999999999865421 1111
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH
Q 018632 106 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 185 (353)
Q Consensus 106 ~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~ 185 (353)
. ....+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 85 ---~---~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 158 (265)
T PLN02888 85 ---K---DVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGAN 158 (265)
T ss_pred ---h---HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHH
Confidence 1 1123466678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcC
Q 018632 186 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 264 (353)
Q Consensus 186 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+++|+++|++++|+||+++||||+|+|++++.+.+.
T Consensus 159 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 195 (265)
T PLN02888 159 RAREVSLTAMPLTAETAERWGLVNHVVEESELLKKAR------------------------------------------- 195 (265)
T ss_pred HHHHHHHhCCccCHHHHHHcCCccEeeChHHHHHHHH-------------------------------------------
Confidence 999999999999999999999999999887764333
Q ss_pred cCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 018632 265 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 344 (353)
Q Consensus 265 ~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi 344 (353)
+++++|++.+|.+++.+|++++.....+++++++.|...+..++. +.++|++||+
T Consensus 196 ------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~-~~~~d~~e~~ 250 (265)
T PLN02888 196 ------------------------EVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYN-GMTKEQFQKM 250 (265)
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc-cCCHHHHHHH
Confidence 458999999999999999999988888999999999887776641 2389999999
Q ss_pred hheeccCC
Q 018632 345 NFQILNKH 352 (353)
Q Consensus 345 ~afl~~~~ 352 (353)
++|+++|+
T Consensus 251 ~af~ekr~ 258 (265)
T PLN02888 251 QEFIAGRS 258 (265)
T ss_pred HHHHhcCC
Confidence 99999975
No 48
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-49 Score=366.39 Aligned_cols=245 Identities=21% Similarity=0.314 Sum_probs=217.9
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
|++.|.++++++|++||||||+ .|++|.+|+.+|.++++.++.|+++++ |.|++||+|+|++++.... .....
T Consensus 2 ~~~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~--~~~~~ 78 (257)
T PRK06495 2 MMSQLKLEVSDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVI--KGPGD 78 (257)
T ss_pred CcceEEEEeeCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhcc--CCchh
Confidence 4567889999999999999998 599999999999999999999999988 8899999999999875421 11122
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
...+...+.+++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++ |+++++++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a 155 (257)
T PRK06495 79 LRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLT 155 (257)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHH
Confidence 23344556678888999999999999999999999999999999999999999999999997 4567799999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|+++|+.++|+||+++|||++++|++++.+.+.
T Consensus 156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~~~~~a~--------------------------------------------- 190 (257)
T PRK06495 156 RRMMLTGYRVPAAELYRRGVIEACLPPEELMPEAM--------------------------------------------- 190 (257)
T ss_pred HHHHHcCCeeCHHHHHHcCCcceecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999888765433
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.||.+++.+|++++.....++.++++.|...+...+. ++|++||+++
T Consensus 191 ----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~a 245 (257)
T PRK06495 191 ----------------------EIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK---TEDAKEAQRA 245 (257)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChHHHHHHHH
Confidence 448999999999999999999988888999999999999988887 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 246 f~~kr~ 251 (257)
T PRK06495 246 FLEKRP 251 (257)
T ss_pred HhccCC
Confidence 999985
No 49
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-49 Score=367.05 Aligned_cols=248 Identities=23% Similarity=0.234 Sum_probs=217.4
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
|++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++.... ......
T Consensus 1 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~~~~ 79 (262)
T PRK07509 1 MMDRVSVTIEDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSP-GNAVKL 79 (262)
T ss_pred CCceEEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhccc-chhhhh
Confidence 56789999999999999999999999999999999999999999999988 9999999999999876421 111111
Q ss_pred HHH----HHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcCh
Q 018632 108 CKD----FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 183 (353)
Q Consensus 108 ~~~----~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g 183 (353)
... ....+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g 159 (262)
T PRK07509 80 LFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVR 159 (262)
T ss_pred HhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhC
Confidence 111 1123445667788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHh
Q 018632 184 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 262 (353)
Q Consensus 184 ~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
.. +++|+++|++++|+||+++||||+++++ +.+.+.
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~--~~~~a~----------------------------------------- 196 (262)
T PRK07509 160 KDVARELTYTARVFSAEEALELGLVTHVSDD--PLAAAL----------------------------------------- 196 (262)
T ss_pred HHHHHHHHHcCCCcCHHHHHHcCChhhhhch--HHHHHH-----------------------------------------
Confidence 99 9999999999999999999999999953 332222
Q ss_pred cCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018632 263 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 342 (353)
Q Consensus 263 ~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 342 (353)
+++++|++.+|.++..+|++++.....++.++++.|...+...+. ++|++|
T Consensus 197 --------------------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e 247 (262)
T PRK07509 197 --------------------------ALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLL---GKNQKI 247 (262)
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHH
Confidence 458999999999999999999998888999999999999888887 999999
Q ss_pred hhhheeccCC
Q 018632 343 VSNFQILNKH 352 (353)
Q Consensus 343 gi~afl~~~~ 352 (353)
|+++|+++|+
T Consensus 248 ~~~af~ekr~ 257 (262)
T PRK07509 248 AVKAQMKKRA 257 (262)
T ss_pred HHHHHhcCCC
Confidence 9999999985
No 50
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-49 Score=367.71 Aligned_cols=246 Identities=21% Similarity=0.282 Sum_probs=211.6
Q ss_pred CCCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCCh
Q 018632 31 DLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKL 105 (353)
Q Consensus 31 ~~~~~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~ 105 (353)
..++.|.+++ +++|++||||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|.|++++... ..+.
T Consensus 8 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~--~~~~ 85 (268)
T PRK07327 8 ADYPALRFDRPPPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEM--ADDF 85 (268)
T ss_pred CCCCeEEEEecCCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhc--cCcH
Confidence 3456688887 57899999999999999999999999999999999999988 889999999999987642 1122
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH
Q 018632 106 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 185 (353)
Q Consensus 106 ~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~ 185 (353)
+....+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 165 (268)
T PRK07327 86 EVRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMA 165 (268)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHH
Confidence 22334455566788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcC
Q 018632 186 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 264 (353)
Q Consensus 186 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+++|++||++++|+||+++|||++|+|++++.+.+.
T Consensus 166 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 202 (268)
T PRK07327 166 KAKYYLLLCEPVSGEEAERIGLVSLAVDDDELLPKAL------------------------------------------- 202 (268)
T ss_pred HHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHH-------------------------------------------
Confidence 999999999999999999999999999888765443
Q ss_pred cCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHhhhcCCCCChh
Q 018632 265 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF---QTFDECLVREYRMSLQGVSRLISGDFY 341 (353)
Q Consensus 265 ~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~---~~~~~~l~~e~~~~~~~~~~~~~~d~~ 341 (353)
+++++|++.+|.+++.+|++++.... ..+++.+..|. ..+. ++|++
T Consensus 203 ------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~----~~~~---~~d~~ 251 (268)
T PRK07327 203 ------------------------EVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEF----MGFS---GPDVR 251 (268)
T ss_pred ------------------------HHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----HHcc---ChhHH
Confidence 44899999999999999999986532 24555555442 3444 99999
Q ss_pred hhhhheeccCC
Q 018632 342 EVSNFQILNKH 352 (353)
Q Consensus 342 egi~afl~~~~ 352 (353)
||+.+|+++|+
T Consensus 252 eg~~af~ekr~ 262 (268)
T PRK07327 252 EGLASLREKRA 262 (268)
T ss_pred HHHHHHHhcCC
Confidence 99999999986
No 51
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=3.2e-50 Score=368.19 Aligned_cols=239 Identities=29% Similarity=0.453 Sum_probs=224.6
Q ss_pred EEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHHHH
Q 018632 38 VEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFR 113 (353)
Q Consensus 38 ~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 113 (353)
++.+++|++|+||||++.|++|.+++.+|.++|+.++.|+++++ |.|++||+|.|++++... +.+....+..
T Consensus 2 ~~~~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~~ 77 (245)
T PF00378_consen 2 YEIEDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS----DEEEAREFFR 77 (245)
T ss_dssp EEEETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH----HHHHHHHHHH
T ss_pred EEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc----ccccccccch
Confidence 68899999999999999999999999999999999999999887 888999999999998875 4556677888
Q ss_pred HHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHHhc
Q 018632 114 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT 192 (353)
Q Consensus 114 ~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~lt 192 (353)
.+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+++++
T Consensus 78 ~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l~ 157 (245)
T PF00378_consen 78 RFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLLT 157 (245)
T ss_dssp HHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeecccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHHHHH
Q 018632 193 GAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII 272 (353)
Q Consensus 193 G~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 272 (353)
|++++|+||+++|||++|+|++++.+.+.
T Consensus 158 g~~~~a~eA~~~Glv~~v~~~~~l~~~a~--------------------------------------------------- 186 (245)
T PF00378_consen 158 GEPISAEEALELGLVDEVVPDEELDEEAL--------------------------------------------------- 186 (245)
T ss_dssp TCEEEHHHHHHTTSSSEEESGGGHHHHHH---------------------------------------------------
T ss_pred cccchhHHHHhhcceeEEcCchhhhHHHH---------------------------------------------------
Confidence 99999999999999999999998775444
Q ss_pred HHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheecc
Q 018632 273 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 350 (353)
Q Consensus 273 ~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~~ 350 (353)
+++++|++.+|.+++.+|+.++......+.+.++.|...+...+. ++|++||+++|+||
T Consensus 187 ----------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~f~eK 245 (245)
T PF00378_consen 187 ----------------ELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFK---SEDFQEGIAAFLEK 245 (245)
T ss_dssp ----------------HHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTT
T ss_pred ----------------HHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC---CHHHHHHHHHHhCc
Confidence 348999999999999999999999888999999999999999998 99999999999986
No 52
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=1.1e-49 Score=367.12 Aligned_cols=244 Identities=17% Similarity=0.207 Sum_probs=209.1
Q ss_pred ceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHHH
Q 018632 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 35 ~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
.+.+++ +++|++||||||+++|+||.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++.... .......
T Consensus 3 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~~ 81 (259)
T TIGR01929 3 DIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYG-YIDDSGV 81 (259)
T ss_pred eEEEEEcCCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhcc-ccchhhH
Confidence 477888 89999999999999999999999999999999999999987 888 7999999998764310 0011111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
. ...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 82 ~--~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~ 159 (259)
T TIGR01929 82 H--RLNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAR 159 (259)
T ss_pred H--HHHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHH
Confidence 1 11234577788999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|++++|+||+++|||++|+|++++.+.+.
T Consensus 160 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 193 (259)
T TIGR01929 160 EIWFLCRQYDAEQALDMGLVNTVVPLADLEKETV---------------------------------------------- 193 (259)
T ss_pred HHHHhCCccCHHHHHHcCCcccccCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999887764433
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++++|++.||.+++.+|++++..... ....++.|...+...+. ++|++||+++|
T Consensus 194 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~---~~d~~egi~af 248 (259)
T TIGR01929 194 ---------------------RWCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFYM---TEEGQEGRNAF 248 (259)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHhc---CccHHHHHHHH
Confidence 448999999999999999999876443 45555566677777776 99999999999
Q ss_pred eccCC
Q 018632 348 ILNKH 352 (353)
Q Consensus 348 l~~~~ 352 (353)
+++|+
T Consensus 249 ~~kr~ 253 (259)
T TIGR01929 249 LEKRQ 253 (259)
T ss_pred hccCC
Confidence 99985
No 53
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-49 Score=366.67 Aligned_cols=244 Identities=24% Similarity=0.316 Sum_probs=212.8
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLE 106 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~ 106 (353)
..+.+.++.+++|++|+||||+++|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++... ...+
T Consensus 6 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~---~~~~ 82 (262)
T PRK06144 6 STDELLLEVRGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAF---STAE 82 (262)
T ss_pred CCCceEEEeeCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhc---cchh
Confidence 44568899999999999999999999999999999999999999999887 887 799999999987542 1112
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCC-cccccCccHHHHHhhcChHH
Q 018632 107 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL-IGFHPDAGASFYLSHLPGHL 185 (353)
Q Consensus 107 ~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~-~G~~p~~g~~~~l~r~~g~~ 185 (353)
....+...+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||++ +|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~ 162 (262)
T PRK06144 83 DAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAA 162 (262)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHH
Confidence 22334455667888899999999999999999999999999999999999999999997 99999999999999999999
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcC
Q 018632 186 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 264 (353)
Q Consensus 186 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (353)
+++++++|++++|+||+++||||+|+|++++.+.+.
T Consensus 163 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------------- 199 (262)
T PRK06144 163 RVKDMLFTARLLEAEEALAAGLVNEVVEDAALDARAD------------------------------------------- 199 (262)
T ss_pred HHHHHHHcCCCcCHHHHHHcCCcCeecCHHHHHHHHH-------------------------------------------
Confidence 999999999999999999999999999888765433
Q ss_pred cCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 018632 265 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 344 (353)
Q Consensus 265 ~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi 344 (353)
+++++|++.||.+++.+|+.++......+ +.+...+...+. ++|++||+
T Consensus 200 ------------------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~l----~~~~~~~~~~~~---~~~~~e~~ 248 (262)
T PRK06144 200 ------------------------ALAELLAAHAPLTLRATKEALRRLRREGL----PDGDDLIRMCYM---SEDFREGV 248 (262)
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHhc---ChHHHHHH
Confidence 45899999999999999999987655544 334456666666 99999999
Q ss_pred hheeccCC
Q 018632 345 NFQILNKH 352 (353)
Q Consensus 345 ~afl~~~~ 352 (353)
++|+++|+
T Consensus 249 ~af~~kr~ 256 (262)
T PRK06144 249 EAFLEKRP 256 (262)
T ss_pred HHHhcCCC
Confidence 99999985
No 54
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=1.4e-49 Score=369.36 Aligned_cols=253 Identities=19% Similarity=0.210 Sum_probs=220.0
Q ss_pred CCCcCCCCceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC--CCcccCcchhhHHHh
Q 018632 27 SVTDDLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG--RAFCAGGDIVSLYHF 99 (353)
Q Consensus 27 ~~~~~~~~~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g--~~F~aG~Dl~~~~~~ 99 (353)
++.|.....|.+++ +++|++||||||+ .|+||.+|+.+|.++++.++.|++|++ |.| ++||+|.|++++...
T Consensus 4 ~~~~~~~~~i~~~~~~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~ 82 (278)
T PLN03214 4 PSPPGATPGVRVDRRPGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAP 82 (278)
T ss_pred CCCCCCCCceEEEEcCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhcc
Confidence 34455556789998 6899999999985 699999999999999999999999987 766 799999999987531
Q ss_pred hhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCccc-ccCccHHHHH
Q 018632 100 MNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYL 178 (353)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~-~p~~g~~~~l 178 (353)
..+.+....+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|+ +|++|++++|
T Consensus 83 --~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l 160 (278)
T PLN03214 83 --KTSAARYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFM 160 (278)
T ss_pred --ccchHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHH
Confidence 1112222334444456778899999999999999999999999999999999999999999999999 5999999999
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHH
Q 018632 179 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 257 (353)
Q Consensus 179 ~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (353)
++++|.. +++|++||+.++|+||+++||||+|+|++++.+.+.
T Consensus 161 ~~~~G~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~------------------------------------ 204 (278)
T PLN03214 161 GRVIDRKVAESLLLRGRLVRPAEAKQLGLIDEVVPAAALMEAAA------------------------------------ 204 (278)
T ss_pred HHhcCHHHHHHHHHcCCccCHHHHHHcCCCcEecChHHHHHHHH------------------------------------
Confidence 9999999 999999999999999999999999999887764333
Q ss_pred HHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCC
Q 018632 258 IVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLIS 337 (353)
Q Consensus 258 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~ 337 (353)
+++++|++.+|.+++.+|++++......++++++.|...+...+. +
T Consensus 205 -------------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s 250 (278)
T PLN03214 205 -------------------------------SAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKMLS---E 250 (278)
T ss_pred -------------------------------HHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC---C
Confidence 458999999999999999999988888899999999988888776 9
Q ss_pred CChhhhhhheeccCC
Q 018632 338 GDFYEVSNFQILNKH 352 (353)
Q Consensus 338 ~d~~egi~afl~~~~ 352 (353)
+|++||+++|+++.+
T Consensus 251 ~d~~egi~aflek~~ 265 (278)
T PLN03214 251 PSIIKALGGVMERLS 265 (278)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999854
No 55
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.7e-49 Score=362.38 Aligned_cols=238 Identities=20% Similarity=0.194 Sum_probs=210.0
Q ss_pred EEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHHHH
Q 018632 38 VEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFR 113 (353)
Q Consensus 38 ~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 113 (353)
.+++++|++||||||+ .|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++... ........+..
T Consensus 6 ~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~ 81 (249)
T PRK07938 6 TTPEPGIAEVTVDYPP-VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT---PGFTALIDANR 81 (249)
T ss_pred cccCCCEEEEEECCCC-cccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhc---cchhHHHHHHH
Confidence 3467899999999997 599999999999999999999999988 999999999999987531 11222223334
Q ss_pred HHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHHhc
Q 018632 114 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT 192 (353)
Q Consensus 114 ~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~lt 192 (353)
.+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++|.. +++|+++
T Consensus 82 ~~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~lt 158 (249)
T PRK07938 82 GCFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFT 158 (249)
T ss_pred HHHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHh
Confidence 45667888999999999999999999999999999999999999999999999986 4567899999999 9999999
Q ss_pred CCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHHHHH
Q 018632 193 GAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII 272 (353)
Q Consensus 193 G~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 272 (353)
|+.++|+||+++|||++|+|++++++.+.
T Consensus 159 g~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------------- 187 (249)
T PRK07938 159 AATITAAELHHFGSVEEVVPRDQLDEAAL--------------------------------------------------- 187 (249)
T ss_pred CCcCCHHHHHHCCCccEEeCHHHHHHHHH---------------------------------------------------
Confidence 99999999999999999999888765443
Q ss_pred HHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheeccCC
Q 018632 273 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 352 (353)
Q Consensus 273 ~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~~~~ 352 (353)
+++++|++.+|.+++.+|++++.....++++.++.|...+...+. ++|++||+++|++||+
T Consensus 188 ----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~ 248 (249)
T PRK07938 188 ----------------EVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNL---AGVSDEHRDAFVEKRK 248 (249)
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHHhcCC
Confidence 448999999999999999999988888899999999988888776 9999999999999986
No 56
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=4.4e-49 Score=362.96 Aligned_cols=246 Identities=28% Similarity=0.394 Sum_probs=219.1
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
.+..+.++..++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++.. ..+...
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~---~~~~~~ 79 (257)
T COG1024 3 TYETILVEREDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS---PEDGNA 79 (257)
T ss_pred CCCeeEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc---ccchhH
Confidence 34568888989999999999999999999999999999999999999998 99999999999999875 111222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
...+....+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus 80 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a 159 (257)
T COG1024 80 AENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRA 159 (257)
T ss_pred HHHHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHH
Confidence 225667777899999999999999999999999999999999999999999999999999999889999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCC-CChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCc
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 265 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (353)
.+|++||+.++++||+++|||++++++ +++.+.+.
T Consensus 160 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~~l~~~a~-------------------------------------------- 195 (257)
T COG1024 160 KELLLTGEPISAAEALELGLVDEVVPDAEELLERAL-------------------------------------------- 195 (257)
T ss_pred HHHHHcCCcCCHHHHHHcCCcCeeeCCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999986 56664443
Q ss_pred CCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018632 266 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 345 (353)
Q Consensus 266 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~ 345 (353)
+++++|+. +|.++..+|+.++.....++++.+..|...+...+. ++|++||++
T Consensus 196 -----------------------~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~eg~~ 248 (257)
T COG1024 196 -----------------------ELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFS---SEDFREGVR 248 (257)
T ss_pred -----------------------HHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhc---ChhHHHHHH
Confidence 33666666 999999999999988777799999999999988666 999999999
Q ss_pred heeccCC
Q 018632 346 FQILNKH 352 (353)
Q Consensus 346 afl~~~~ 352 (353)
+|++ |+
T Consensus 249 a~~~-r~ 254 (257)
T COG1024 249 AFLE-RK 254 (257)
T ss_pred HHHc-cC
Confidence 9998 54
No 57
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-49 Score=369.62 Aligned_cols=248 Identities=22% Similarity=0.259 Sum_probs=211.3
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcC------
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQG------ 103 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~------ 103 (353)
+.|.++++++|++|+||||++.|+||.+|+.+|.++++.++.|++|++ |.|++||+|+|++++.......
T Consensus 4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (296)
T PRK08260 4 ETIRYDVADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPV 83 (296)
T ss_pred ceEEEeeeCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhccccccccccc
Confidence 458899999999999999999999999999999999999999999988 8899999999999875311000
Q ss_pred -------ChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHH
Q 018632 104 -------KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF 176 (353)
Q Consensus 104 -------~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~ 176 (353)
.......+...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~ 163 (296)
T PRK08260 84 EADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSW 163 (296)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhh
Confidence 0111122333445678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHH
Q 018632 177 YLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR 255 (353)
Q Consensus 177 ~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (353)
+|++++|.. +++|+++|++++|+||+++|||++|+|++++...+.
T Consensus 164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~---------------------------------- 209 (296)
T PRK08260 164 FLPRLVGLQTALEWVYSGRVFDAQEALDGGLVRSVHPPDELLPAAR---------------------------------- 209 (296)
T ss_pred hHHHhhCHHHHHHHHHcCCccCHHHHHHCCCceeecCHHHHHHHHH----------------------------------
Confidence 999999999 999999999999999999999999999887754333
Q ss_pred HHHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhc-CchHHHHHHHHHHhhhc--CCHHHHHHHHHHHHHHhh
Q 018632 256 IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRF--QTFDECLVREYRMSLQGV 332 (353)
Q Consensus 256 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~-~p~a~~~~k~~l~~~~~--~~~~~~l~~e~~~~~~~~ 332 (353)
+++++|+++ +|.+++.+|++++.... ...... ..|...+..++
T Consensus 210 ---------------------------------~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~~~-~~e~~~~~~~~ 255 (296)
T PRK08260 210 ---------------------------------ALAREIADNTSPVSVALTRQMMWRMAGADHPMEAH-RVDSRAIYSRG 255 (296)
T ss_pred ---------------------------------HHHHHHHhcCChHHHHHHHHHHHhcccCCCcHHHH-HHHHHHHHHHc
Confidence 448899986 99999999999987642 234433 55777777777
Q ss_pred hcCCCCChhhhhhheeccCC
Q 018632 333 SRLISGDFYEVSNFQILNKH 352 (353)
Q Consensus 333 ~~~~~~d~~egi~afl~~~~ 352 (353)
. ++|++||+++|+++|+
T Consensus 256 ~---~~d~~egi~af~~kr~ 272 (296)
T PRK08260 256 R---SGDGKEGVSSFLEKRP 272 (296)
T ss_pred c---ChhHHHHHHHHhcCCC
Confidence 6 9999999999999985
No 58
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=4.9e-49 Score=363.05 Aligned_cols=244 Identities=17% Similarity=0.198 Sum_probs=214.3
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CC--CCCcccCcchhhHHHhhhcCChH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GS--GRAFCAGGDIVSLYHFMNQGKLE 106 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~--g~~F~aG~Dl~~~~~~~~~~~~~ 106 (353)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+ +++ |. |++||+|+|++++... ..+
T Consensus 3 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~--~~~-- 77 (261)
T PRK11423 3 MQYVNVVTINKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSG--GRD-- 77 (261)
T ss_pred ccceEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhc--ccc--
Confidence 456889999999999999999999999999999999999999887 887 64 3899999999987532 111
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-
Q 018632 107 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 185 (353)
Q Consensus 107 ~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~- 185 (353)
...+...+.+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..
T Consensus 78 -~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~ 156 (261)
T PRK11423 78 -PLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHI 156 (261)
T ss_pred -HHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHH
Confidence 123344566788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCc
Q 018632 186 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 265 (353)
Q Consensus 186 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (353)
+++|+++|++++|+||+++||||+|+|++++++.+.
T Consensus 157 a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~-------------------------------------------- 192 (261)
T PRK11423 157 VKEMFFTASPITAQRALAVGILNHVVEVEELEDFTL-------------------------------------------- 192 (261)
T ss_pred HHHHHHcCCCcCHHHHHHcCCcCcccCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999887764333
Q ss_pred CCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCH-HHHHHHHHHHHHHhhhcCCCCChhhh
Q 018632 266 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTF-DECLVREYRMSLQGVSRLISGDFYEV 343 (353)
Q Consensus 266 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~-~~~-~~~l~~e~~~~~~~~~~~~~~d~~eg 343 (353)
+++++|++.+|.+++.+|++++.... ..+ ...++.|...+..++. ++|++||
T Consensus 193 -----------------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~eg 246 (261)
T PRK11423 193 -----------------------QMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYD---SEDYQEG 246 (261)
T ss_pred -----------------------HHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhC---ChhHHHH
Confidence 45899999999999999999986543 344 6888888888888887 9999999
Q ss_pred hhheeccCC
Q 018632 344 SNFQILNKH 352 (353)
Q Consensus 344 i~afl~~~~ 352 (353)
+.+|+++|+
T Consensus 247 ~~af~~kr~ 255 (261)
T PRK11423 247 MNAFLEKRK 255 (261)
T ss_pred HHHHhccCC
Confidence 999999985
No 59
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=6.4e-49 Score=364.57 Aligned_cols=246 Identities=18% Similarity=0.219 Sum_probs=210.6
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
+..+.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++.... ....+.
T Consensus 12 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~ 90 (273)
T PRK07396 12 YEDILYKSADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGG-YVDDDG 90 (273)
T ss_pred CcceEEEecCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhccc-ccchhh
Confidence 3468899999999999999999999999999999999999999999987 888 6999999999864210 001111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
...+ ....++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 91 ~~~~--~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a 168 (273)
T PRK07396 91 VPRL--NVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKA 168 (273)
T ss_pred hhhh--HHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHH
Confidence 1111 133566788899999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
++|+++|+.++|+||+++||||+|+|++++++.+.
T Consensus 169 ~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~--------------------------------------------- 203 (273)
T PRK07396 169 REIWFLCRQYDAQEALDMGLVNTVVPLADLEKETV--------------------------------------------- 203 (273)
T ss_pred HHHHHhCCCcCHHHHHHcCCcCeecCHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999887765443
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++++|++.+|.+++.+|++++.... .++...+.|...+...+. ++|++||+.+
T Consensus 204 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~a 257 (273)
T PRK07396 204 ----------------------RWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYM---TEEAQEGRNA 257 (273)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHhc---ChhHHHHHHH
Confidence 34899999999999999999987644 455555567777777776 9999999999
Q ss_pred eeccCC
Q 018632 347 QILNKH 352 (353)
Q Consensus 347 fl~~~~ 352 (353)
|+++|+
T Consensus 258 f~~kr~ 263 (273)
T PRK07396 258 FNEKRQ 263 (273)
T ss_pred HhCCCC
Confidence 999985
No 60
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-48 Score=360.38 Aligned_cols=247 Identities=22% Similarity=0.207 Sum_probs=217.7
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
...+.++.+++|++|+||||++.|++|.+|+.+|.++++.++.|+++++ |.|++||+|+|++++.... ....+..
T Consensus 5 ~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~ 83 (260)
T PRK07827 5 DTLVRYAVDGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGG-GDPYDAA 83 (260)
T ss_pred CcceEEEeeCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcc-cCchhHH
Confidence 4468889999999999999999999999999999999999999999888 8899999999999875421 1112222
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 188 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~ 188 (353)
..+...+.+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..+++
T Consensus 84 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~~ 163 (260)
T PRK07827 84 VARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAAR 163 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHHH
Confidence 33455667788899999999999999999999999999999999999999999999999999999999999987645999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
++++|++++|+||+++|||+++++ ++++.+.
T Consensus 164 l~l~g~~~~a~eA~~~Glv~~v~~--~l~~~a~----------------------------------------------- 194 (260)
T PRK07827 164 YYLTGEKFGAAEAARIGLVTAAAD--DVDAAVA----------------------------------------------- 194 (260)
T ss_pred HHHhCCccCHHHHHHcCCcccchH--HHHHHHH-----------------------------------------------
Confidence 999999999999999999999974 3543333
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhee
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 348 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl 348 (353)
+++++|++.+|.+++.+|++++......+++.++.|...+..++. ++|+++|+++|+
T Consensus 195 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~af~ 251 (260)
T PRK07827 195 --------------------ALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFV---SDEAREGMTAFL 251 (260)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHh
Confidence 448999999999999999999998888999999999998888887 999999999999
Q ss_pred ccCC
Q 018632 349 LNKH 352 (353)
Q Consensus 349 ~~~~ 352 (353)
++|+
T Consensus 252 ~kr~ 255 (260)
T PRK07827 252 QKRP 255 (260)
T ss_pred cCCC
Confidence 9985
No 61
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-48 Score=357.49 Aligned_cols=237 Identities=24% Similarity=0.309 Sum_probs=211.3
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHH
Q 018632 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDF 111 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 111 (353)
|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|++|++ |.|++||+|.|++++... . ...+
T Consensus 2 i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~----~---~~~~ 74 (248)
T PRK06072 2 IKVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPD----F---AIDL 74 (248)
T ss_pred eEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhh----h---HHHH
Confidence 5678899999999999999999999999999999999999999887 889999999999987531 1 1223
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHHHHh
Q 018632 112 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL 191 (353)
Q Consensus 112 ~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~l 191 (353)
...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..++++++
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll 154 (248)
T PRK06072 75 RETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILV 154 (248)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHH
Confidence 34456778889999999999999999999999999999999999999999999999999999999999999966999999
Q ss_pred cCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHHHH
Q 018632 192 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 271 (353)
Q Consensus 192 tG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 271 (353)
+|++++|+||+++||||.+ +++.+.+
T Consensus 155 ~g~~~~a~eA~~~Glv~~~---~~~~~~a--------------------------------------------------- 180 (248)
T PRK06072 155 LGGEFTAEEAERWGLLKIS---EDPLSDA--------------------------------------------------- 180 (248)
T ss_pred hCCccCHHHHHHCCCcccc---chHHHHH---------------------------------------------------
Confidence 9999999999999999953 2332211
Q ss_pred HHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheeccC
Q 018632 272 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 351 (353)
Q Consensus 272 ~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~~~ 351 (353)
.+++++|++.||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|+++|
T Consensus 181 ----------------~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr 241 (248)
T PRK06072 181 ----------------EEMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGK---TEDFKEGISSFKEKR 241 (248)
T ss_pred ----------------HHHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhC---ChhHHHHHHHHhcCC
Confidence 2458999999999999999999988888999999999999988887 999999999999998
Q ss_pred C
Q 018632 352 H 352 (353)
Q Consensus 352 ~ 352 (353)
+
T Consensus 242 ~ 242 (248)
T PRK06072 242 E 242 (248)
T ss_pred C
Confidence 6
No 62
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=1.2e-48 Score=358.32 Aligned_cols=237 Identities=21% Similarity=0.258 Sum_probs=206.1
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHH
Q 018632 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDF 111 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 111 (353)
|.++++++|++||||||+ .|+||.+|+.+|.++++.++.|+++++ |.|++||+|.|+.++.. .....+
T Consensus 3 v~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~-------~~~~~~ 74 (251)
T TIGR03189 3 VWLERDGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP-------DQCAAM 74 (251)
T ss_pred EEEEeeCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc-------hhHHHH
Confidence 678889999999999997 599999999999999999999999987 99999999999987531 111223
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHH
Q 018632 112 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 190 (353)
Q Consensus 112 ~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ 190 (353)
...+.+++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++ ++++|++++|.. +++|+
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~-~~~~l~~~vg~~~a~~l~ 153 (251)
T TIGR03189 75 LASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPA-ASCLLPERMGRVAAEDLL 153 (251)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCc-hHHHHHHHhCHHHHHHHH
Confidence 4455678888999999999999999999999999999999999999999999999999874 577899999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHHH
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 270 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (353)
+||++++|+||+++|||++|+|+.+ +...+
T Consensus 154 ltg~~~~a~eA~~~Glv~~v~~~~~-~~a~~------------------------------------------------- 183 (251)
T TIGR03189 154 YSGRSIDGAEGARIGLANAVAEDPE-NAALA------------------------------------------------- 183 (251)
T ss_pred HcCCCCCHHHHHHCCCcceecCcHH-HHHHH-------------------------------------------------
Confidence 9999999999999999999997533 11111
Q ss_pred HHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHH-HHHHHHHHhhhcCCCCChhhhhhheec
Q 018632 271 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLV-REYRMSLQGVSRLISGDFYEVSNFQIL 349 (353)
Q Consensus 271 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~-~e~~~~~~~~~~~~~~d~~egi~afl~ 349 (353)
.++++|+++||.+++.+|++++.....++++++. .|...+...+. ++|++||+++|++
T Consensus 184 ------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~e 242 (251)
T TIGR03189 184 ------------------WFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMA---THDAVEGLNAFLE 242 (251)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhC---CHhHHHHHHHHHh
Confidence 1268999999999999999999887888887764 67777777776 9999999999999
Q ss_pred cCC
Q 018632 350 NKH 352 (353)
Q Consensus 350 ~~~ 352 (353)
+|+
T Consensus 243 kr~ 245 (251)
T TIGR03189 243 KRP 245 (251)
T ss_pred cCC
Confidence 986
No 63
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=4.6e-48 Score=354.33 Aligned_cols=239 Identities=19% Similarity=0.209 Sum_probs=215.9
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
|+..+.++++++|++|+||||++.|++|.+++.+|.++++.++.|+++++ |.|++||+|.|+.++.... ...
T Consensus 3 ~~~~~~~~~~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~---~~~- 78 (249)
T PRK07110 3 MKVVELREVEEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQ---TGK- 78 (249)
T ss_pred CCceEEEEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhcc---chh-
Confidence 56678899999999999999999999999999999999999999999987 9999999999999875421 111
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-H
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 186 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a 186 (353)
..+.. ..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 79 -~~~~~--~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a 155 (249)
T PRK07110 79 -GTFTE--ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALG 155 (249)
T ss_pred -hhHhh--HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHH
Confidence 11221 5678889999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcC
Q 018632 187 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 266 (353)
Q Consensus 187 ~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (353)
+++++||++++++||+++|||++|+|++++.+.+.
T Consensus 156 ~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------- 190 (249)
T PRK07110 156 QEMLLTARYYRGAELKKRGVPFPVLPRAEVLEKAL--------------------------------------------- 190 (249)
T ss_pred HHHHHcCCccCHHHHHHcCCCeEEeChHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999887764333
Q ss_pred CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 267 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 267 ~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+.+++|++.||.+++.+|+.++......+.++++.|...+...+. ++|++||+++
T Consensus 191 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~~ 245 (249)
T PRK07110 191 ----------------------ELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFH---QPEVKRRIES 245 (249)
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC---CHhHHHHHHH
Confidence 448999999999999999999999889999999999999999887 9999999987
Q ss_pred e
Q 018632 347 Q 347 (353)
Q Consensus 347 f 347 (353)
.
T Consensus 246 ~ 246 (249)
T PRK07110 246 L 246 (249)
T ss_pred h
Confidence 5
No 64
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-48 Score=352.99 Aligned_cols=231 Identities=22% Similarity=0.301 Sum_probs=206.0
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHH
Q 018632 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDF 111 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 111 (353)
+.++++++|++||||||+++|++|.+|+.+|.++++.++.+ ++++ |.|++||+|+|+++... ...+
T Consensus 2 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---------~~~~ 71 (243)
T PRK07854 2 IGVTRDGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---------ADDF 71 (243)
T ss_pred ceEEEeCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---------HHHH
Confidence 56788999999999999999999999999999999999865 7887 99999999999985211 1223
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHH
Q 018632 112 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 190 (353)
Q Consensus 112 ~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ 190 (353)
...+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus 72 ~~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ 151 (243)
T PRK07854 72 PDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAML 151 (243)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHH
Confidence 44556778889999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHHH
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 270 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (353)
+||++++|+||+++|||++|++ ++ .+.
T Consensus 152 ltg~~~~a~eA~~~Glv~~v~~---~~-~a~------------------------------------------------- 178 (243)
T PRK07854 152 LGAEKLTAEQALATGMANRIGT---LA-DAQ------------------------------------------------- 178 (243)
T ss_pred HcCCCcCHHHHHHCCCcccccC---HH-HHH-------------------------------------------------
Confidence 9999999999999999999964 22 111
Q ss_pred HHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheecc
Q 018632 271 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 350 (353)
Q Consensus 271 i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~~ 350 (353)
+++++|++.||.++..+|++++.. .+++++++.|...+...+. ++|++||+++|+++
T Consensus 179 ------------------~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~k 235 (243)
T PRK07854 179 ------------------AWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWA---SQDAIEAQVARIEK 235 (243)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhCC
Confidence 458999999999999999999875 6799999999998888887 99999999999999
Q ss_pred CC
Q 018632 351 KH 352 (353)
Q Consensus 351 ~~ 352 (353)
|+
T Consensus 236 r~ 237 (243)
T PRK07854 236 RP 237 (243)
T ss_pred CC
Confidence 85
No 65
>PLN02921 naphthoate synthase
Probab=100.00 E-value=5.1e-48 Score=365.08 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=208.4
Q ss_pred CCCceEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCC
Q 018632 32 LCNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGK 104 (353)
Q Consensus 32 ~~~~v~~~~--~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~ 104 (353)
.++.|.++. +++|++|+||||++.|+||.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++... ....
T Consensus 63 ~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~-~~~~ 141 (327)
T PLN02921 63 EFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKD-GYVG 141 (327)
T ss_pred CCceEEEEEecCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhcc-cccc
Confidence 455688887 58999999999999999999999999999999999999887 888 799999999976431 0011
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH
Q 018632 105 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 184 (353)
Q Consensus 105 ~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~ 184 (353)
.+....+ ....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.
T Consensus 142 ~~~~~~~--~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~ 219 (327)
T PLN02921 142 PDDAGRL--NVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQ 219 (327)
T ss_pred hhHHHHH--HHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCH
Confidence 1111111 12356778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhc
Q 018632 185 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 263 (353)
Q Consensus 185 ~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
. +++|+++|+.++|+||+++|||++|+|++++++.+.
T Consensus 220 ~~A~ellltG~~~~A~eA~~~GLV~~vv~~~~l~~~a~------------------------------------------ 257 (327)
T PLN02921 220 KKAREMWFLARFYTASEALKMGLVNTVVPLDELEGETV------------------------------------------ 257 (327)
T ss_pred HHHHHHHHcCCcCCHHHHHHCCCceEEeCHHHHHHHHH------------------------------------------
Confidence 9 999999999999999999999999999888765443
Q ss_pred CcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018632 264 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 343 (353)
Q Consensus 264 ~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~eg 343 (353)
+++++|++++|.+++.+|++++..... .....+.|...+..++. ++|++||
T Consensus 258 -------------------------~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~---s~d~~eg 308 (327)
T PLN02921 258 -------------------------KWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFYG---SEEGNEG 308 (327)
T ss_pred -------------------------HHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHhc---CHHHHHH
Confidence 348999999999999999999876543 33333334466666665 9999999
Q ss_pred hhheeccCC
Q 018632 344 SNFQILNKH 352 (353)
Q Consensus 344 i~afl~~~~ 352 (353)
+++|+++|+
T Consensus 309 i~Af~ekr~ 317 (327)
T PLN02921 309 RTAYLEGRA 317 (327)
T ss_pred HHHHhccCC
Confidence 999999985
No 66
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-47 Score=351.27 Aligned_cols=228 Identities=23% Similarity=0.264 Sum_probs=205.5
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
++.+.++.+++|++|+||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++... ..+..
T Consensus 3 ~~~v~~~~~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~----~~~~~ 78 (258)
T PRK06190 3 EPILLVETHDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGD----GSAYG 78 (258)
T ss_pred CceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcc----cchhh
Confidence 4568999999999999999999999999999999999999999999987 889999999999987542 11111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
. ...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 79 ~--~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 156 (258)
T PRK06190 79 A--QDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRAR 156 (258)
T ss_pred H--HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 1 23355678889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|++||++++|+||+++||||+++|++++.+.+.
T Consensus 157 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~---------------------------------------------- 190 (258)
T PRK06190 157 RMSLTGDFLDAADALRAGLVTEVVPHDELLPRAR---------------------------------------------- 190 (258)
T ss_pred HHHHhCCccCHHHHHHcCCCeEecCHhHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999888765433
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhh
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS 333 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~ 333 (353)
+++++|+++||.+++.+|++++.....++.++++.|...+...+.
T Consensus 191 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~ 235 (258)
T PRK06190 191 ---------------------RLAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNR 235 (258)
T ss_pred ---------------------HHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHc
Confidence 348999999999999999999998888999999999999988886
No 67
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=1.6e-47 Score=359.56 Aligned_cols=249 Identities=15% Similarity=0.169 Sum_probs=208.5
Q ss_pred CCceEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-------CCcccCcchhhHHHh
Q 018632 33 CNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-------RAFCAGGDIVSLYHF 99 (353)
Q Consensus 33 ~~~v~~~~--~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-------~~F~aG~Dl~~~~~~ 99 (353)
+..|.+++ +++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++...
T Consensus 22 ~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~ 101 (302)
T PRK08321 22 FTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRD 101 (302)
T ss_pred ceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccc
Confidence 33588888 89999999999999999999999999999999999999987 766 599999999876321
Q ss_pred h---hcCCh-H--HHHHHH-HHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEe-CceEEeccCCCcccccC
Q 018632 100 M---NQGKL-E--ECKDFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPD 171 (353)
Q Consensus 100 ~---~~~~~-~--~~~~~~-~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~-~~a~f~~pe~~~G~~p~ 171 (353)
. ..... . ...... .....+...+..+||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~ 181 (302)
T PRK08321 102 GYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDG 181 (302)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCC
Confidence 0 00000 0 000111 112345667889999999999999999999999999999999 69999999999999999
Q ss_pred ccHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChh
Q 018632 172 AGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKN 250 (353)
Q Consensus 172 ~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
+|++++|++++|.. +++|++||+.++|+||+++|||++++|++++++.+.
T Consensus 182 ~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~----------------------------- 232 (302)
T PRK08321 182 GYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELETEAL----------------------------- 232 (302)
T ss_pred chHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHHHHHH-----------------------------
Confidence 99999999999999 999999999999999999999999999888765443
Q ss_pred hHHHHHHHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHH
Q 018632 251 SVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQ 330 (353)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~ 330 (353)
+++++|++.+|.+++.+|++++..... +.+....|.+.+..
T Consensus 233 --------------------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~ 273 (302)
T PRK08321 233 --------------------------------------EWAREINGKSPTAMRMLKYAFNLTDDG-LVGQQLFAGEATRL 273 (302)
T ss_pred --------------------------------------HHHHHHHhCCHHHHHHHHHHHHhhhcc-cHHHHHHHHHHHHH
Confidence 448999999999999999999876553 34445567777777
Q ss_pred hhhcCCCCChhhhhhheeccCC
Q 018632 331 GVSRLISGDFYEVSNFQILNKH 352 (353)
Q Consensus 331 ~~~~~~~~d~~egi~afl~~~~ 352 (353)
.+. ++|+++|+.+|+++|+
T Consensus 274 ~~~---~~d~~egi~af~ekr~ 292 (302)
T PRK08321 274 AYM---TDEAQEGRDAFLEKRD 292 (302)
T ss_pred Hhc---CHHHHHHHHHHhccCC
Confidence 776 9999999999999986
No 68
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.6e-47 Score=350.51 Aligned_cols=242 Identities=16% Similarity=0.168 Sum_probs=207.8
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEEC 108 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 108 (353)
++.+.++++++|++|+||||++.|++|.+|+.+|.++++.++. ++++ |.|++||+|+|++++..... .....
T Consensus 3 ~~~i~~~~~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~--~vr~vVl~g~g~~FsaG~Dl~~~~~~~~--~~~~~ 78 (255)
T PRK07112 3 YQTIRVRQQGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCEH--AATIVVLEGLPEVFCFGADFSAIAEKPD--AGRAD 78 (255)
T ss_pred CceEEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhc--CceEEEEEcCCCCcccCcCHHHHhhccc--cchhh
Confidence 3468899999999999999999999999999999999999984 4555 88999999999998754211 11111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HH
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 187 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 187 (353)
......+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++| +.+|++++|.. ++
T Consensus 79 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~ 157 (255)
T PRK07112 79 LIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAH 157 (255)
T ss_pred hhhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHH
Confidence 11233445678889999999999999999999999999999999999999999999999999865 45799999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
+|+++|++++|+||+++||||+|+|+++. ...
T Consensus 158 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~~--~~~---------------------------------------------- 189 (255)
T PRK07112 158 YMTLMTQPVTAQQAFSWGLVDAYGANSDT--LLR---------------------------------------------- 189 (255)
T ss_pred HHHHhCCcccHHHHHHcCCCceecCcHHH--HHH----------------------------------------------
Confidence 99999999999999999999999986542 111
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
+++++|++.+|.+++.+|++++.. ...+.++++.|.......+. ++|++||+.+|
T Consensus 190 ---------------------~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af 244 (255)
T PRK07112 190 ---------------------KHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFA---DPENLRKIARY 244 (255)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHc---ChHHHHHHHHH
Confidence 348999999999999999999865 55789999999998888887 99999999999
Q ss_pred eccCC
Q 018632 348 ILNKH 352 (353)
Q Consensus 348 l~~~~ 352 (353)
+++|+
T Consensus 245 ~~kr~ 249 (255)
T PRK07112 245 VETGK 249 (255)
T ss_pred HcCCC
Confidence 99985
No 69
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.2e-48 Score=361.56 Aligned_cols=245 Identities=19% Similarity=0.202 Sum_probs=205.9
Q ss_pred CceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhh-HHHh---h-hcCC
Q 018632 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVS-LYHF---M-NQGK 104 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~-~~~~---~-~~~~ 104 (353)
+.+.++.+++|++||||||+++|+||.+|+.+|.++++.++.|++|++ |.|++||+|+|+++ +... . ..+.
T Consensus 5 ~~v~~~~~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~ 84 (298)
T PRK12478 5 QTLLYTTAGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGR 84 (298)
T ss_pred eEEEEeccCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccc
Confidence 458889999999999999999999999999999999999999999998 99999999999986 2110 0 0000
Q ss_pred hHHHHHH---HH---HHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCc-ccccCccHHHH
Q 018632 105 LEECKDF---FR---TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI-GFHPDAGASFY 177 (353)
Q Consensus 105 ~~~~~~~---~~---~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~-G~~p~~g~~~~ 177 (353)
.+....+ .. ....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++ |++| ++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~- 161 (298)
T PRK12478 85 WDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW- 161 (298)
T ss_pred cCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH-
Confidence 0001111 01 11235567889999999999999999999999999999999999999999997 8875 3333
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHH
Q 018632 178 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI 256 (353)
Q Consensus 178 l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (353)
.+++|.. |++|++||++++|+||+++||||+|||++++++.+.
T Consensus 162 -~~~vG~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~----------------------------------- 205 (298)
T PRK12478 162 -LYRLSLAKVKWHSLTGRPLTGVQAAEAELINEAVPFERLEARVA----------------------------------- 205 (298)
T ss_pred -HHHhhHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHH-----------------------------------
Confidence 2569998 999999999999999999999999999988875444
Q ss_pred HHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhhhcC
Q 018632 257 DIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRL 335 (353)
Q Consensus 257 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~-~~~~~~l~~e~~~~~~~~~~~ 335 (353)
+++++|+..||.+++.+|++++.... .++.++++.|...+..+..
T Consensus 206 --------------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~-- 251 (298)
T PRK12478 206 --------------------------------EVATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRN-- 251 (298)
T ss_pred --------------------------------HHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc--
Confidence 34899999999999999999998766 4699999999999988887
Q ss_pred CCCChh--------hhhhheeccCC
Q 018632 336 ISGDFY--------EVSNFQILNKH 352 (353)
Q Consensus 336 ~~~d~~--------egi~afl~~~~ 352 (353)
++|++ ||++||++||+
T Consensus 252 -s~d~~e~~~~~~~egv~Af~ekR~ 275 (298)
T PRK12478 252 -TPDALEFIRTAETQGVRAAVERRD 275 (298)
T ss_pred -ChhHHHHHHHHHHHHHHHHHHhcC
Confidence 99997 59999999986
No 70
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.7e-45 Score=331.47 Aligned_cols=210 Identities=20% Similarity=0.291 Sum_probs=185.1
Q ss_pred CCCceEEEEe-----CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhc
Q 018632 32 LCNQVLVEGK-----ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQ 102 (353)
Q Consensus 32 ~~~~v~~~~~-----~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~ 102 (353)
|+++|.++.. ++|++|+||||++ |+||++|+.+|.++++.++.|+++++ |.|++||+|+|++++...
T Consensus 1 ~~~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~--- 76 (222)
T PRK05869 1 MNEFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTL--- 76 (222)
T ss_pred CccchhhhcccCcccCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhcc---
Confidence 3556666665 8899999999985 99999999999999999999999998 889999999999987542
Q ss_pred CChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcC
Q 018632 103 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 182 (353)
Q Consensus 103 ~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~ 182 (353)
..+....+...+.+++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++
T Consensus 77 -~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~i 155 (222)
T PRK05869 77 -SAQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAA 155 (222)
T ss_pred -ChhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHh
Confidence 1122223344566788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHH
Q 018632 183 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDK 261 (353)
Q Consensus 183 g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
|.. +++++++|++++|+||+++||||+++|++++.+.+.
T Consensus 156 g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------- 195 (222)
T PRK05869 156 GPSRAKELVFSGRFFDAEEALALGLIDEMVAPDDVYDAAA---------------------------------------- 195 (222)
T ss_pred CHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCchHHHHHHH----------------------------------------
Confidence 999 999999999999999999999999999888764333
Q ss_pred hcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhh
Q 018632 262 CFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGR 313 (353)
Q Consensus 262 ~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~ 313 (353)
+++++|+..+|.+++.+|++++...
T Consensus 196 ---------------------------~~a~~ia~~~~~a~~~~K~~~~~~~ 220 (222)
T PRK05869 196 ---------------------------AWARRFLDGPPHALAAAKAGISDVY 220 (222)
T ss_pred ---------------------------HHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 4589999999999999999998654
No 71
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=4.7e-45 Score=363.23 Aligned_cols=243 Identities=15% Similarity=0.075 Sum_probs=214.2
Q ss_pred eEEEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHhc-CCCccc----CCCCC-cccCcchhhH
Q 018632 36 VLVEGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGF----GSGRA-FCAGGDIVSL 96 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~-------------Nal~~~~~~~L~~~l~~~~~-d~~v~v----g~g~~-F~aG~Dl~~~ 96 (353)
+.++++++|++||||||+++ |+|+.+|+.+|.+++..++. |++|++ |.|+. ||+|+|++.+
T Consensus 260 v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~ 339 (546)
T TIGR03222 260 VAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLE 339 (546)
T ss_pred EEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCcccc
Confidence 55667899999999999999 99999999999999999984 599998 88887 9999999832
Q ss_pred HHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE-cccccccc-ccccccCCeEEE-------eCceEEeccCCCcc
Q 018632 97 YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL-NGVTMGGG-AGVSIPGTFRVA-------CGKTVFATPETLIG 167 (353)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav-~G~a~GgG-~~lal~cD~ria-------~~~a~f~~pe~~~G 167 (353)
.. .+............+++..|..+||||||+| ||+|+||| ++|+++||+||+ +++++|++||+++|
T Consensus 340 ~~----~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lG 415 (546)
T TIGR03222 340 AH----KDHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFG 415 (546)
T ss_pred cc----ccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccc
Confidence 11 1111112223334567888999999999999 89999999 999999999999 89999999999999
Q ss_pred cccCccHHHHHhhcC-hHH-H--HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhc
Q 018632 168 FHPDAGASFYLSHLP-GHL-G--EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSD 243 (353)
Q Consensus 168 ~~p~~g~~~~l~r~~-g~~-a--~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 243 (353)
++|++|++++|++++ |.. + .++++||+.++|+||+++|||++|+|++++.+.+.
T Consensus 416 l~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~~Glv~~vv~~~~l~~~a~---------------------- 473 (546)
T TIGR03222 416 LYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDAEEAERLGLVTAAPDDIDWEDEIR---------------------- 473 (546)
T ss_pred cCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCHHHHHHcCCcccccCchHHHHHHH----------------------
Confidence 999999999999998 987 7 66999999999999999999999999988865444
Q ss_pred ccCCChhhHHHHHHHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HH
Q 018632 244 LVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LV 322 (353)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~-l~ 322 (353)
+++++|++.||.|++.+|++++.....+++++ +.
T Consensus 474 ---------------------------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~ 508 (546)
T TIGR03222 474 ---------------------------------------------IALEERASFSPDALTGLEANLRFAGPETMETRIFG 508 (546)
T ss_pred ---------------------------------------------HHHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHH
Confidence 34899999999999999999999999999999 99
Q ss_pred HHHHHHHHhhhcCCCCChhh---hhhheeccCC
Q 018632 323 REYRMSLQGVSRLISGDFYE---VSNFQILNKH 352 (353)
Q Consensus 323 ~e~~~~~~~~~~~~~~d~~e---gi~afl~~~~ 352 (353)
.|...+..++. ++|.+| |+++|++||+
T Consensus 509 ~e~~~~~~~~~---~~d~~e~~~g~~af~ekr~ 538 (546)
T TIGR03222 509 RLTAWQNWIFN---RPNAVGENGALKVYGSGKK 538 (546)
T ss_pred HHHHHHHHHhc---CCcccchhhHHHHHccCCC
Confidence 99999988887 999999 9999999996
No 72
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-44 Score=337.19 Aligned_cols=231 Identities=22% Similarity=0.261 Sum_probs=197.4
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhh-c-----
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMN-Q----- 102 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~-~----- 102 (353)
++.+.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|+|++++..... .
T Consensus 3 ~~~v~~~~~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 82 (288)
T PRK08290 3 YEYVRYEVAGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQ 82 (288)
T ss_pred CceEEEEeeCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCcccccccccccccccc
Confidence 4568899999999999999999999999999999999999999999998 99999999999998632110 0
Q ss_pred -----------CC-hHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCccccc
Q 018632 103 -----------GK-LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 170 (353)
Q Consensus 103 -----------~~-~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p 170 (353)
.. ..........+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~ 161 (288)
T PRK08290 83 HPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-P 161 (288)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-C
Confidence 00 0011112234456777889999999999999999999999999999999999999999999998 4
Q ss_pred CccHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCCh
Q 018632 171 DAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK 249 (353)
Q Consensus 171 ~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
+ ++++++++++|.. +++|++||+.++|+||+++|||++|+|++++++.+.
T Consensus 162 ~-~~~~~l~~~iG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~---------------------------- 212 (288)
T PRK08290 162 G-VEYFAHPWELGPRKAKELLFTGDRLTADEAHRLGMVNRVVPRDELEAETL---------------------------- 212 (288)
T ss_pred c-chHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHH----------------------------
Confidence 4 4567789999999 999999999999999999999999999887765443
Q ss_pred hhHHHHHHHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHH
Q 018632 250 NSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMS 328 (353)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~-~~~~~l~~e~~~~ 328 (353)
+++++|++.+|.+++.+|++++..... +++++++.|....
T Consensus 213 ---------------------------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~ 253 (288)
T PRK08290 213 ---------------------------------------ELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLH 253 (288)
T ss_pred ---------------------------------------HHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 448999999999999999999988765 7999999999988
Q ss_pred HHhh
Q 018632 329 LQGV 332 (353)
Q Consensus 329 ~~~~ 332 (353)
...+
T Consensus 254 ~~~~ 257 (288)
T PRK08290 254 QLGH 257 (288)
T ss_pred HHcc
Confidence 7766
No 73
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=1.5e-44 Score=360.78 Aligned_cols=242 Identities=14% Similarity=0.052 Sum_probs=211.8
Q ss_pred EEEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHhc-CCCccc----CCC-CCcccCcchhhHH
Q 018632 37 LVEGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGF----GSG-RAFCAGGDIVSLY 97 (353)
Q Consensus 37 ~~~~~~~v~~I~lnrp~~~-------------Nal~~~~~~~L~~~l~~~~~-d~~v~v----g~g-~~F~aG~Dl~~~~ 97 (353)
.++++++|++||||||+++ |+||.+|+.+|.++++.++. |++|++ |.| ++||+|+|++.+.
T Consensus 265 ~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~Dl~~~~ 344 (550)
T PRK08184 265 EIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAADATLLA 344 (550)
T ss_pred EEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCCChhhhc
Confidence 3455689999999999988 68999999999999999986 789887 888 4999999987321
Q ss_pred HhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEc-ccccccc-ccccccCCeEEEe-------CceEEeccCCCccc
Q 018632 98 HFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN-GVTMGGG-AGVSIPGTFRVAC-------GKTVFATPETLIGF 168 (353)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~-G~a~GgG-~~lal~cD~ria~-------~~a~f~~pe~~~G~ 168 (353)
. .+.............++.++..+||||||+|| |+|+||| ++|+++||+||++ ++++|++||+++|+
T Consensus 345 -~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl 420 (550)
T PRK08184 345 -H---KDHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGL 420 (550)
T ss_pred -c---cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccC
Confidence 1 11111122334455678889999999999997 9999999 9999999999999 99999999999999
Q ss_pred ccCccHHHHHhhc-ChHH-HHHH--HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcc
Q 018632 169 HPDAGASFYLSHL-PGHL-GEFL--ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDL 244 (353)
Q Consensus 169 ~p~~g~~~~l~r~-~g~~-a~~l--~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 244 (353)
+|++|++++|+++ +|.. |+++ ++||++++|+||+++|||++|+|++++++.+.
T Consensus 421 ~p~~gg~~~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~----------------------- 477 (550)
T PRK08184 421 YPMVNGLSRLARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVR----------------------- 477 (550)
T ss_pred CCCCCcHHHhHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHH-----------------------
Confidence 9999999999988 6998 9887 58999999999999999999999988875444
Q ss_pred cCCChhhHHHHHHHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHH
Q 018632 245 VYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVR 323 (353)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~-l~~ 323 (353)
+++++|++.||.+++.+|++++.....+++++ +.+
T Consensus 478 --------------------------------------------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~~ 513 (550)
T PRK08184 478 --------------------------------------------IALEERASLSPDALTGMEANLRFAGPETMETRIFGR 513 (550)
T ss_pred --------------------------------------------HHHHHHHhCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 34899999999999999999999999999999 999
Q ss_pred HHHHHHHhhhcCCCCChhh---hhhheeccCC
Q 018632 324 EYRMSLQGVSRLISGDFYE---VSNFQILNKH 352 (353)
Q Consensus 324 e~~~~~~~~~~~~~~d~~e---gi~afl~~~~ 352 (353)
|...+..++. ++|.+| |+++|++||+
T Consensus 514 e~~~~~~~~~---~~d~~e~~~g~~af~ekr~ 542 (550)
T PRK08184 514 LTAWQNWIFQ---RPNAVGEKGALKVYGTGQK 542 (550)
T ss_pred HHHHHHHHhc---CCcccccchHHHHhccCCC
Confidence 9999988887 999999 9999999986
No 74
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=7.3e-44 Score=330.99 Aligned_cols=248 Identities=16% Similarity=0.163 Sum_probs=196.6
Q ss_pred cCCCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhc-----CCCccc----CC-CCCcccCcchhhHHHh
Q 018632 30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWEN-----DPNIGF----GS-GRAFCAGGDIVSLYHF 99 (353)
Q Consensus 30 ~~~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~-----d~~v~v----g~-g~~F~aG~Dl~~~~~~ 99 (353)
....-.|.++.+++|++|+|| |++.|+||.+|+.+|.+++++++. |++|++ |. |++||+|+|++++...
T Consensus 13 ~~~~~~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~ 91 (287)
T PRK08788 13 ELSQLRVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAEL 91 (287)
T ss_pred ccCceEEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhh
Confidence 333445777788999999996 889999999999999999999998 888887 77 7999999999987532
Q ss_pred hhcCChHHHHHHHHHHHHHHHHHh---hCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHH
Q 018632 100 MNQGKLEECKDFFRTLYSFIYLLG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF 176 (353)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~l~---~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~ 176 (353)
....+.+....+...+...+..+. .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~ 171 (287)
T PRK08788 92 IRAGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYS 171 (287)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHH
Confidence 111121222222222333333333 79999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHH
Q 018632 177 YLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR 255 (353)
Q Consensus 177 ~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (353)
++++++|.. +++|++||+.++|+||+++||||+++|++++.+.+.
T Consensus 172 ~l~~~vG~~~A~ellltG~~l~A~eA~~~GLV~~vv~~~el~~~a~---------------------------------- 217 (287)
T PRK08788 172 FLARRVGPKLAEELILSGKLYTAEELHDMGLVDVLVEDGQGEAAVR---------------------------------- 217 (287)
T ss_pred HHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHH----------------------------------
Confidence 999999999 999999999999999999999999999888765443
Q ss_pred HHHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcC
Q 018632 256 IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRL 335 (353)
Q Consensus 256 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~ 335 (353)
+++++|++. |.+....|+..+.....++++.++.|......+.+.
T Consensus 218 ---------------------------------~~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 262 (287)
T PRK08788 218 ---------------------------------TFIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQL- 262 (287)
T ss_pred ---------------------------------HHHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhhc-
Confidence 347888876 777777777777666678899999887777665541
Q ss_pred CCCChhhhhhhee
Q 018632 336 ISGDFYEVSNFQI 348 (353)
Q Consensus 336 ~~~d~~egi~afl 348 (353)
...-.+-|..|+
T Consensus 263 -~~~~~~~~~~~~ 274 (287)
T PRK08788 263 -EEKDLRTMERLV 274 (287)
T ss_pred -ccccHHHHHHHH
Confidence 333444454443
No 75
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=2.8e-44 Score=372.01 Aligned_cols=284 Identities=18% Similarity=0.212 Sum_probs=221.2
Q ss_pred ceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 35 ~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
.+.++. +++|++||||||++.|+||.+|+.+|.++++.++.|++|++ |.|++||+|+|++++.... ..+.....
T Consensus 7 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~-~~~~~~~~ 85 (715)
T PRK11730 7 TLQVDWLEDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLF-AAPEEELS 85 (715)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhc-cCCHHHHH
Confidence 467774 78999999999999999999999999999999999999988 8899999999999876421 11222334
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
.+...+.+++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. |++
T Consensus 86 ~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~ 165 (715)
T PRK11730 86 QWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALE 165 (715)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHH
Confidence 5556667788899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHH-hhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
|++||++++|+||+++||||+|+|++++.+.+..++ +++..+.. ... .......... . +...
T Consensus 166 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~-~~~----~~~~~~~p~a-~-----------~~~~ 228 (715)
T PRK11730 166 WIAAGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIAGKLD-WKA----RRQPKLEPLK-L-----------SKIE 228 (715)
T ss_pred HHHcCCcCCHHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCc-ccc----ccCccccccc-c-----------cchh
Confidence 999999999999999999999999988877666553 33321100 000 0000000000 0 0000
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe
Q 018632 268 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 347 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af 347 (353)
....+...++ .+.++..++.|.++ .++++++.+...+++++++.|.+.+..++. ++|++||+++|
T Consensus 229 ~~~~~~~~k~-----------~~~~~~~~~~pa~~-~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~d~~egi~aF 293 (715)
T PRK11730 229 AMMSFTTAKG-----------MVAQKAGKHYPAPM-TAVKTIEAAAGLGRDEALELEAKGFVKLAK---TNVARALVGIF 293 (715)
T ss_pred HHHHHHHHHH-----------HHHHhhccCCccHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHH
Confidence 0000011111 11245566667666 688899988888999999999999999997 99999999999
Q ss_pred eccC
Q 018632 348 ILNK 351 (353)
Q Consensus 348 l~~~ 351 (353)
+++|
T Consensus 294 ~~~~ 297 (715)
T PRK11730 294 LNDQ 297 (715)
T ss_pred HHHH
Confidence 9986
No 76
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3e-44 Score=325.27 Aligned_cols=223 Identities=15% Similarity=0.123 Sum_probs=195.4
Q ss_pred CCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc--CCCCCcccCcchhhHHHhhhcCChHHHHH
Q 018632 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF--GSGRAFCAGGDIVSLYHFMNQGKLEECKD 110 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 110 (353)
.+.|.++.+++|++||||||+ .|++|.+++.+|.++++.++.+..+.+ |.|++||+|+|++++... .+....
T Consensus 2 ~~~i~~~~~~~v~~itln~~~-~Nal~~~~~~~l~~~l~~~~~~~~vvvl~g~g~~F~~G~Dl~~~~~~-----~~~~~~ 75 (229)
T PRK06213 2 SELVSYTLEDGVATITLDDGK-VNALSPAMIDALNAALDQAEDDRAVVVITGQPGIFSGGFDLKVMTSG-----AQAAIA 75 (229)
T ss_pred cceEEEEecCCEEEEEeCCCC-CCCCCHHHHHHHHHHHHHhhccCcEEEEeCCCCceEcCcCHHHHhcc-----hHhHHH
Confidence 446889999999999999984 699999999999999999984444434 899999999999987531 233344
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCc-eEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 111 ~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
+...+.+++.++.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|+.|+..++++++|.. +++
T Consensus 76 ~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~~ 155 (229)
T PRK06213 76 LLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQR 155 (229)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHHH
Confidence 5566778888999999999999999999999999999999999999 99999999999998888888899999998 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCH
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 268 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (353)
++++|++++|+||+++||||+|+|++++.+.+.
T Consensus 156 lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------- 188 (229)
T PRK06213 156 AVINAEMFDPEEAVAAGFLDEVVPPEQLLARAQ----------------------------------------------- 188 (229)
T ss_pred HHHcCcccCHHHHHHCCCceeccChHHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999888764333
Q ss_pred HHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 018632 269 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 328 (353)
Q Consensus 269 ~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~ 328 (353)
+++++|++.+|.++..+|++++......+.++++.|.+.+
T Consensus 189 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~ 228 (229)
T PRK06213 189 --------------------AAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAAEF 228 (229)
T ss_pred --------------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhhhc
Confidence 4489999999999999999999888888889888887654
No 77
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-44 Score=307.13 Aligned_cols=250 Identities=21% Similarity=0.261 Sum_probs=226.4
Q ss_pred CCceEEEE----eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc-----CCCCCcccCcchhhHHHhhhcC
Q 018632 33 CNQVLVEG----KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF-----GSGRAFCAGGDIVSLYHFMNQG 103 (353)
Q Consensus 33 ~~~v~~~~----~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v-----g~g~~F~aG~Dl~~~~~~~~~~ 103 (353)
...+.+++ +.+|.+|-+|||.+.|+|+.-|+++|.++++.+..|+.++| ..++.||+|+||++-..+
T Consensus 26 ~~Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~M---- 101 (291)
T KOG1679|consen 26 ANEVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTM---- 101 (291)
T ss_pred CceeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcC----
Confidence 33455553 45899999999999999999999999999999999999998 567999999999987764
Q ss_pred ChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcCh
Q 018632 104 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 183 (353)
Q Consensus 104 ~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g 183 (353)
+..+...|...+..++..+.++|.||||+|+|.++|||++|+++||+|+|+++++|+++|.+++++|+.|++++|+|.+|
T Consensus 102 s~~Ev~~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg 181 (291)
T KOG1679|consen 102 SPSEVTRFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVG 181 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHh
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHh
Q 018632 184 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 262 (353)
Q Consensus 184 ~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
.. ++||++|++.+++.||...||||++|...+-.+.+..
T Consensus 182 ~alaKELIftarvl~g~eA~~lGlVnhvv~qneegdaa~~---------------------------------------- 221 (291)
T KOG1679|consen 182 VALAKELIFTARVLNGAEAAKLGLVNHVVEQNEEGDAAYQ---------------------------------------- 221 (291)
T ss_pred HHHHHhHhhhheeccchhHHhcchHHHHHhcCccccHHHH----------------------------------------
Confidence 99 9999999999999999999999999976432211110
Q ss_pred cCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018632 263 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 342 (353)
Q Consensus 263 ~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 342 (353)
-+.+++++|.-+.|.++++.|..++.+...++..++..|.....+.+. +.|..|
T Consensus 222 -----------------------kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i~---t~drLe 275 (291)
T KOG1679|consen 222 -----------------------KALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQIIP---TKDRLE 275 (291)
T ss_pred -----------------------HHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcCc---HHHHHH
Confidence 012579999999999999999999999999999999999999999998 999999
Q ss_pred hhhheeccCC
Q 018632 343 VSNFQILNKH 352 (353)
Q Consensus 343 gi~afl~~~~ 352 (353)
|+.+|-++|+
T Consensus 276 glaaf~ekr~ 285 (291)
T KOG1679|consen 276 GLAAFKEKRK 285 (291)
T ss_pred HHHHHHhhcC
Confidence 9999999986
No 78
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-43 Score=331.84 Aligned_cols=213 Identities=20% Similarity=0.234 Sum_probs=181.0
Q ss_pred CCCceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcC---C
Q 018632 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQG---K 104 (353)
Q Consensus 32 ~~~~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~---~ 104 (353)
.++.|.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++ |.|++||+|.|++++....... .
T Consensus 8 ~~~~v~~e~~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~ 87 (302)
T PRK08272 8 NLKTMTYEVTGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGG 87 (302)
T ss_pred CCCeEEEEeECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhccccccccc
Confidence 35568999999999999999999999999999999999999999999988 9999999999999886532110 0
Q ss_pred ----------------hHH--HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCc
Q 018632 105 ----------------LEE--CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 166 (353)
Q Consensus 105 ----------------~~~--~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~ 166 (353)
... ...+...+.+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~ 167 (302)
T PRK08272 88 AYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRV 167 (302)
T ss_pred ccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhc
Confidence 000 01234556677888999999999999999999999999999999999999999999998
Q ss_pred ccccCccHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhccc
Q 018632 167 GFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLV 245 (353)
Q Consensus 167 G~~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
|.+|+. ..+++++|.. |++|++||++++|+||+++||||+++|++++++.+.
T Consensus 168 gg~~~~---~~~~~~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~------------------------ 220 (302)
T PRK08272 168 WGVPAT---GMWAYRLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERTE------------------------ 220 (302)
T ss_pred ccCChH---HHHHHHhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHHHHHHHHH------------------------
Confidence 666643 2467899999 999999999999999999999999999888765444
Q ss_pred CCChhhHHHHHHHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhc
Q 018632 246 YPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF 314 (353)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~ 314 (353)
+++++|++.||.+++.+|++++...+
T Consensus 221 -------------------------------------------~la~~ia~~~~~a~~~~K~~l~~~~~ 246 (302)
T PRK08272 221 -------------------------------------------RLVERIAAVPVNQLAMVKLAVNSALL 246 (302)
T ss_pred -------------------------------------------HHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 34888999999999999999987654
No 79
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=6.8e-43 Score=361.68 Aligned_cols=280 Identities=17% Similarity=0.221 Sum_probs=217.8
Q ss_pred CCCceEEEE-eCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCccc----CC-CCCcccCcchhhHHHhhhcCC
Q 018632 32 LCNQVLVEG-KANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGF----GS-GRAFCAGGDIVSLYHFMNQGK 104 (353)
Q Consensus 32 ~~~~v~~~~-~~~v~~I~lnrp-~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~-g~~F~aG~Dl~~~~~~~~~~~ 104 (353)
|...+.++. +++|++|||||| ++.|+||.+|+.+|.++++.++.|++|++ |. |++||+|+|++++... ..
T Consensus 3 ~~~~~~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~---~~ 79 (708)
T PRK11154 3 MASAFTLNVREDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAAC---KT 79 (708)
T ss_pred CCceEEEEEcCCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhcc---CC
Confidence 344577787 789999999999 68999999999999999999999999886 54 5899999999987542 11
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCc--eEEeccCCCcccccCccHHHHHhhcC
Q 018632 105 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLP 182 (353)
Q Consensus 105 ~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~ 182 (353)
.+....+......++.++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~v 159 (708)
T PRK11154 80 AQEAEALARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLI 159 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhc
Confidence 2223344455667888999999999999999999999999999999999996 59999999999999999999999999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHH
Q 018632 183 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDK 261 (353)
Q Consensus 183 g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
|.. |++|+++|++++|+||+++||||+++|++++.+.+.++++.....+..+. +.. .
T Consensus 160 G~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~~--~~~--------------------~ 217 (708)
T PRK11154 160 GVSTALDMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPLP--VRE--------------------R 217 (708)
T ss_pred CHHHHHHHHHhCCcCCHHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcCC--chh--------------------h
Confidence 999 99999999999999999999999999998887655555321000000000 000 0
Q ss_pred hcCcC--CHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCC
Q 018632 262 CFGLD--TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 339 (353)
Q Consensus 262 ~~~~~--~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d 339 (353)
+.+.+ ....+++. +.+.+.+-.+....|+..+|++++.+...+++++++.|.+.+..++. |+|
T Consensus 218 ~~~~~p~~~~~~~~~------------~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~ 282 (708)
T PRK11154 218 LLEGNPLGRALLFKQ------------ARKKTLAKTQGNYPAPERILDVVRTGLEKGMSSGYEAEARAFGELAM---TPE 282 (708)
T ss_pred hcccCchhHHHHHHH------------HHHHHHHhcccCChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHH
Confidence 00000 00111111 11122222343457999999999999889999999999999999997 999
Q ss_pred hhhhhhheeccC
Q 018632 340 FYEVSNFQILNK 351 (353)
Q Consensus 340 ~~egi~afl~~~ 351 (353)
+++|+++|+.++
T Consensus 283 ~~~~~~aF~~~~ 294 (708)
T PRK11154 283 SAALRSIFFATT 294 (708)
T ss_pred HHHHHHHHHHHH
Confidence 999999998664
No 80
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.6e-42 Score=322.77 Aligned_cols=270 Identities=17% Similarity=0.241 Sum_probs=212.1
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHHHHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSF 118 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l 118 (353)
+++|+||||+++|++|.+|+.+|.++++.++.|++|++ |.| ++||+|+|++++..... ........+...+.++
T Consensus 38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~-~~~~~~~~~~~~~~~l 116 (360)
T TIGR03200 38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYA-GNPQEYRQYMRLFNDM 116 (360)
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcc-cChhHHHHHHHHHHHH
Confidence 55699999999999999999999999999999999998 888 69999999998765321 1223334455556778
Q ss_pred HHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHHhcCCCCC
Q 018632 119 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN 197 (353)
Q Consensus 119 ~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~ 197 (353)
+..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. |++++++|++++
T Consensus 117 ~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~s 196 (360)
T TIGR03200 117 VSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWS 196 (360)
T ss_pred HHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHcCccceecCCCCh------------hHHHHHHHhhhcCC-HH--HHHHHHHHhhcccCCChhhHHHHHHHHHHh
Q 018632 198 GAEMMACGLATHYSVSEKL------------PLIEEELGKLVTDD-PS--VIEACLEKYSDLVYPDKNSVIHRIDIVDKC 262 (353)
Q Consensus 198 a~eA~~~Glv~~vv~~~~l------------~~~~~~l~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (353)
|+||+++|||++|+|+.++ ++..+.+.++...+ .. ++.+.|..+......
T Consensus 197 A~EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------------- 261 (360)
T TIGR03200 197 AHKAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQGTID--------------- 261 (360)
T ss_pred HHHHHHcCChheecCchhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcccch---------------
Confidence 9999999999999999887 55555554433332 22 555566555532111
Q ss_pred cCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 018632 263 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 342 (353)
Q Consensus 263 ~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e 342 (353)
...+-+. ..+++.++....|..+..+++-++..+.......-+.-..-+.-.+ ..+..+
T Consensus 262 -----~~~l~~~------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 320 (360)
T TIGR03200 262 -----LSLLDEA------------VEALCAKLLNTFPECLTKSIEELRKPKLFAWNQNKENSRAWLALNM----MNEART 320 (360)
T ss_pred -----HhHHHHH------------HHHHHHHHHHhchHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHhhc----ccccch
Confidence 0011111 1135778888889999999999998776665555444333333333 578999
Q ss_pred hhhheecc
Q 018632 343 VSNFQILN 350 (353)
Q Consensus 343 gi~afl~~ 350 (353)
|++||-++
T Consensus 321 ~~~~~~~~ 328 (360)
T TIGR03200 321 GFRAFNEG 328 (360)
T ss_pred hhHHHhcc
Confidence 99999994
No 81
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=2.6e-42 Score=356.55 Aligned_cols=275 Identities=19% Similarity=0.207 Sum_probs=215.3
Q ss_pred EEeCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCccc-----CCCCCcccCcchhhHHHhhhcCChHHHHHHH
Q 018632 39 EGKANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGF-----GSGRAFCAGGDIVSLYHFMNQGKLEECKDFF 112 (353)
Q Consensus 39 ~~~~~v~~I~lnrp-~~~Nal~~~~~~~L~~~l~~~~~d~~v~v-----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~ 112 (353)
+.+++|++|||||| ++.|+||.+|+.+|.++++.++.|++|++ |.|++||+|+|++++... .+......+.
T Consensus 6 ~~~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~~ 82 (699)
T TIGR02440 6 VREDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAAC---QTAGEAKALA 82 (699)
T ss_pred EcCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhcc---CChhHHHHHH
Confidence 45689999999999 68999999999999999999999999885 788999999999987532 1222333445
Q ss_pred HHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCc--eEEeccCCCcccccCccHHHHHhhcChHH-HHHH
Q 018632 113 RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 189 (353)
Q Consensus 113 ~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l 189 (353)
...+.++..+.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++|.. +++|
T Consensus 83 ~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~l 162 (699)
T TIGR02440 83 QQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDM 162 (699)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHH
Confidence 56677888999999999999999999999999999999999986 79999999999999999999999999999 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHH
Q 018632 190 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 269 (353)
Q Consensus 190 ~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (353)
+++|+.++|+||+++||||+++|++++.+.+..+++......... .....+...+ .....
T Consensus 163 lltG~~~~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~~~-~~~~~~~~~~-------------------~~a~~ 222 (699)
T TIGR02440 163 ILTGKQLRAKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRKPL-SLQERLLEGT-------------------PLGRA 222 (699)
T ss_pred HHcCCcCCHHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCCCc-cchhhhcccC-------------------chhHH
Confidence 999999999999999999999999888766655532100000000 0000000000 00001
Q ss_pred HHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheec
Q 018632 270 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 349 (353)
Q Consensus 270 ~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~ 349 (353)
.+.+. +.+.+.+-.+....|...+|++++.+...+++++++.|.+.+..++. ++|.++++.+|+.
T Consensus 223 ~~~~~------------~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~~f~~ 287 (699)
T TIGR02440 223 LLFDQ------------AAKKTAKKTQGNYPAAERILDVVRQGLAQGMQKGLDAEARAFGELVM---TPESAALRSIFFA 287 (699)
T ss_pred HHHHH------------HHHHHHHhcccCChhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHH
Confidence 11111 11123333455577888899999999999999999999999999998 9999999999986
Q ss_pred cC
Q 018632 350 NK 351 (353)
Q Consensus 350 ~~ 351 (353)
++
T Consensus 288 ~~ 289 (699)
T TIGR02440 288 TT 289 (699)
T ss_pred HH
Confidence 53
No 82
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=4.3e-43 Score=301.94 Aligned_cols=244 Identities=21% Similarity=0.309 Sum_probs=211.1
Q ss_pred EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhh--c-C-C----hHH
Q 018632 40 GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMN--Q-G-K----LEE 107 (353)
Q Consensus 40 ~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~--~-~-~----~~~ 107 (353)
.+..|.++.||||.|.|+|+..|+.|+.++++.++.||++++ |.|++||+|+|+..+..... + + + ...
T Consensus 28 ~~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~~dd~aR~g~~ 107 (292)
T KOG1681|consen 28 AQPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPEGDDVARKGRS 107 (292)
T ss_pred CCCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccccchHhhhhHH
Confidence 345699999999999999999999999999999999999999 99999999999877654311 1 1 1 233
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH-H-
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L- 185 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~- 185 (353)
...+...+++.+..|.+||||||++|+|+|+|+|+.|..+||+|+|+++|.|+.-|+.+|+..+.|...+||..+|. .
T Consensus 108 lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~ 187 (292)
T KOG1681|consen 108 LRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSL 187 (292)
T ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHH
Confidence 45667788899999999999999999999999999999999999999999999999999999999999999999995 4
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCc
Q 018632 186 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 265 (353)
Q Consensus 186 a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (353)
++++.+|++.++|.||++.|||.+|+|+.+-. ....+
T Consensus 188 ~~elafTar~f~a~EAl~~GLvSrvf~dk~~l-l~~~l------------------------------------------ 224 (292)
T KOG1681|consen 188 ARELAFTARKFSADEALDSGLVSRVFPDKEEL-LNGAL------------------------------------------ 224 (292)
T ss_pred HHHHHhhhhhcchhhhhhcCcchhhcCCHHHH-HhhhH------------------------------------------
Confidence 99999999999999999999999999975422 11222
Q ss_pred CCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 018632 266 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 345 (353)
Q Consensus 266 ~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~ 345 (353)
.+|..|+..||.++..||+.|+++++.+.++.|..=.---...+. +.|+.+.+.
T Consensus 225 -----------------------~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L~---s~Dl~~av~ 278 (292)
T KOG1681|consen 225 -----------------------PMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSMLL---SDDLVKAVM 278 (292)
T ss_pred -----------------------HHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHHH---HHHHHHHHH
Confidence 468999999999999999999999999999998864433333333 899999999
Q ss_pred heeccCC
Q 018632 346 FQILNKH 352 (353)
Q Consensus 346 afl~~~~ 352 (353)
+.++|++
T Consensus 279 a~m~k~k 285 (292)
T KOG1681|consen 279 AQMEKLK 285 (292)
T ss_pred HHhhcCC
Confidence 9998764
No 83
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=5e-42 Score=302.10 Aligned_cols=250 Identities=22% Similarity=0.287 Sum_probs=224.5
Q ss_pred CCceEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 33 CNQVLVEGKANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 33 ~~~v~~~~~~~v~~I~ln-rp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
+..+.+++++++.+|.+| ||++.|+++.+++.++..+++.+..|+++.+ |.|++||+|.|+..+......+..+.
T Consensus 6 ~~~~vv~~~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~ 85 (266)
T KOG0016|consen 6 YREIVVTRENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEE 85 (266)
T ss_pred ccceEEEecCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCccccc
Confidence 456899999999999999 9999999999999999999999999999765 89999999999999877643333222
Q ss_pred HH---HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH
Q 018632 108 CK---DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 184 (353)
Q Consensus 108 ~~---~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~ 184 (353)
.. ++...+..++..+..+|||+||.|||+|+|.|+.+...||+++|+|+++|..|+..+|++|++++++.+|+++|.
T Consensus 86 ~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~ 165 (266)
T KOG0016|consen 86 SDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGS 165 (266)
T ss_pred chhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhch
Confidence 22 233444458888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhc
Q 018632 185 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 263 (353)
Q Consensus 185 ~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (353)
. |.||++.|++++|+||.+.|||++|++.+.+.+.+.
T Consensus 166 ~~A~E~ll~~~kltA~Ea~~~glVskif~~~tf~~~v~------------------------------------------ 203 (266)
T KOG0016|consen 166 ASANEMLLFGEKLTAQEACEKGLVSKIFPAETFNEEVL------------------------------------------ 203 (266)
T ss_pred hhHHHHHHhCCcccHHHHHhcCchhhhcChHHHHHHHH------------------------------------------
Confidence 9 999999999999999999999999999988764322
Q ss_pred CcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhh
Q 018632 264 GLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEV 343 (353)
Q Consensus 264 ~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~eg 343 (353)
+.++++++.+|.+++..|++++......+..+.+.|.+.....|. ++|+.+.
T Consensus 204 -------------------------~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~---s~e~~~~ 255 (266)
T KOG0016|consen 204 -------------------------KKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWV---SAECLAR 255 (266)
T ss_pred -------------------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcc---ChHHHHH
Confidence 337889999999999999999999889999999999999999998 9999999
Q ss_pred hhheeccCC
Q 018632 344 SNFQILNKH 352 (353)
Q Consensus 344 i~afl~~~~ 352 (353)
+.+|+.++.
T Consensus 256 ~~~~~~~~~ 264 (266)
T KOG0016|consen 256 FKQYLSKKR 264 (266)
T ss_pred HHHHhcccc
Confidence 999998864
No 84
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=100.00 E-value=1.4e-40 Score=343.87 Aligned_cols=283 Identities=15% Similarity=0.197 Sum_probs=216.7
Q ss_pred ceEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 35 ~v~~~~-~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
.+.++. +++|++|+||||++.|+||.+|+.+|.++++.++.|++|++ |.|++||+|+|++++..... .+.....
T Consensus 7 ~i~~~~~~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~ 85 (714)
T TIGR02437 7 TIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFA-LPDAELI 85 (714)
T ss_pred eEEEEEccCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhccc-CCHHHHH
Confidence 567774 78999999999999999999999999999999999999988 88899999999999864211 1222334
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~ 188 (353)
.+....++++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. |.+
T Consensus 86 ~~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~ 165 (714)
T TIGR02437 86 QWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALE 165 (714)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence 4555667788999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHH-hhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCC
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 267 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (353)
|++||++++|+||+++||||+++|++++.+.+..++ ++....+. ...... +...... ...+..+++.
T Consensus 166 llltG~~~~A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~-------~~~~~~-~~~~~~~--~~~~~~~~~~-- 233 (714)
T TIGR02437 166 WIASGKENRAEDALKVGAVDAVVTADKLGAAALQLLKDAINGKLD-------WKAKRQ-PKLEPLK--LSKIEAMMSF-- 233 (714)
T ss_pred HHHcCCcCCHHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCc-------ccccCC-CCccccc--ccchHHHHHH--
Confidence 999999999999999999999999888876665553 21111000 000000 0000000 0001111110
Q ss_pred HHHHHHHHHhccCCCCCchHHH-HHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhh
Q 018632 268 VEEIIDSLESEASLINDPWCGS-TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNF 346 (353)
Q Consensus 268 ~~~i~~~l~~~~~~~~~~~a~~-~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~a 346 (353)
+++.+ ..++-..+ ..+-....+.+..+...+++++++.|.+.|.+++. |++.+.++..
T Consensus 234 -----------------~~~~~~~~~~~~~~-~pap~~~~~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~~l~~~ 292 (714)
T TIGR02437 234 -----------------TTAKGMVAQVAGPH-YPAPMTAVKTIEKAARFGRDKALEIEAKGFVKLAK---TSEAKALIGL 292 (714)
T ss_pred -----------------HHHHHHHHHhhcCC-CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 11112 12232333 33444466788888888999999999999999998 9999999999
Q ss_pred eeccC
Q 018632 347 QILNK 351 (353)
Q Consensus 347 fl~~~ 351 (353)
|+.+|
T Consensus 293 ff~~r 297 (714)
T TIGR02437 293 FLNDQ 297 (714)
T ss_pred HhhhH
Confidence 98875
No 85
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=100.00 E-value=1.4e-40 Score=302.76 Aligned_cols=180 Identities=17% Similarity=0.156 Sum_probs=153.7
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcc-c----CCCCCcccCcchhhHHHhhhcCChHHHHH
Q 018632 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG-F----GSGRAFCAGGDIVSLYHFMNQGKLEECKD 110 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~-v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 110 (353)
+.++.+++|++|+||||++ |+||.+|+.+|.++++.++.|++++ + |.|++||+|+|++++... .........
T Consensus 2 ~~~~~~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~ 78 (239)
T PLN02267 2 CTLEKRGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAA--GSAPSRLHL 78 (239)
T ss_pred ceeEecCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcc--ccCHHHHHH
Confidence 5788899999999999985 9999999999999999999988865 3 888999999999986431 112222233
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEe-CceEEeccCCCcccccCccHHHHHhhcChHH-H-H
Q 018632 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL-G-E 187 (353)
Q Consensus 111 ~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a-~ 187 (353)
+...+.+++.++.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+++++.++++++|.. + +
T Consensus 79 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~ 158 (239)
T PLN02267 79 MVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARR 158 (239)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHH
Confidence 44556778889999999999999999999999999999999998 5789999999999974444577899999988 7 6
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCC-CChhH
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVS-EKLPL 218 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~-~~l~~ 218 (353)
+|+++|++++|+||+++||||+|+|+ +++.+
T Consensus 159 ~llltG~~~~a~eA~~~Glv~~vv~~~~~l~~ 190 (239)
T PLN02267 159 DVLLRAAKLTAEEAVEMGIVDSAHDSAEETVE 190 (239)
T ss_pred HHHHcCCcCCHHHHHHCCCcceecCCHHHHHH
Confidence 99999999999999999999999985 45654
No 86
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=100.00 E-value=2.2e-40 Score=343.09 Aligned_cols=293 Identities=16% Similarity=0.168 Sum_probs=212.8
Q ss_pred CceEEEEeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCccc-----CCCCCcccCcchhhHHHhhhcCChHH
Q 018632 34 NQVLVEGKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGF-----GSGRAFCAGGDIVSLYHFMNQGKLEE 107 (353)
Q Consensus 34 ~~v~~~~~~~v~~I~lnrp~-~~Nal~~~~~~~L~~~l~~~~~d~~v~v-----g~g~~F~aG~Dl~~~~~~~~~~~~~~ 107 (353)
+.+.++.+++|++||||||+ +.|+||.+++.+|.++++.++.|++|++ |.|++||+|+|++++... .+.+.
T Consensus 13 ~~~~~~~~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~---~~~~~ 89 (737)
T TIGR02441 13 THRHYEVKGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAAC---KTAQE 89 (737)
T ss_pred CeEEEEEECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhcc---CChHH
Confidence 45888899999999999998 5899999999999999999999999873 889999999999998641 22333
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCc--eEEeccCCCcccccCccHHHHHhhcChHH
Q 018632 108 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL 185 (353)
Q Consensus 108 ~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~g~~ 185 (353)
...+.....+++.++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|..
T Consensus 90 ~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~ 169 (737)
T TIGR02441 90 VTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVP 169 (737)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHH
Confidence 4455566778889999999999999999999999999999999999987 58999999999999999999999999998
Q ss_pred -HHHHHhcCCCCCHHHHHHcCccceecCC--CC---hhH-HHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHH
Q 018632 186 -GEFLALTGAKLNGAEMMACGLATHYSVS--EK---LPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 258 (353)
Q Consensus 186 -a~~l~ltG~~~~a~eA~~~Glv~~vv~~--~~---l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
|++|+++|++++|+||+++||||+|+|+ ++ +++ ..+.+...+......+...+...+........ ..
T Consensus 170 ~A~~l~ltG~~i~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~~-~~----- 243 (737)
T TIGR02441 170 AALDMMLTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVHK-IT----- 243 (737)
T ss_pred HHHHHHHcCCcCCHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccCc-cc-----
Confidence 9999999999999999999999999986 22 221 11111111111111111111011100000000 00
Q ss_pred HHHhcCc-CCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCC
Q 018632 259 VDKCFGL-DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLIS 337 (353)
Q Consensus 259 ~~~~~~~-~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~ 337 (353)
....+. .....+++...+ ...++ .+....|...+.+.+..+...+++++++.|.+.|.+++. |
T Consensus 244 -~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~g~~~Ap~~~l~~v~~~~~~~~~~gl~~E~~~f~~l~~---s 307 (737)
T TIGR02441 244 -QYVMTNPFVRQQVYKTAED-----------KVMKQ-TKGLYPAPLKILDVVRTGYDQGPDAGYEAESKAFGELSM---T 307 (737)
T ss_pred -hhhcccchhHHHHHHHHHH-----------HHHHh-ccCCCccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---C
Confidence 000000 001111111111 12223 233244555577788888888999999999999999998 9
Q ss_pred CChhhhhhheeccC
Q 018632 338 GDFYEVSNFQILNK 351 (353)
Q Consensus 338 ~d~~egi~afl~~~ 351 (353)
+..+.-+..|+.+|
T Consensus 308 ~~a~al~~~f~~~~ 321 (737)
T TIGR02441 308 FESKALIGLFHGQT 321 (737)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887654
No 87
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=100.00 E-value=8.1e-39 Score=273.59 Aligned_cols=249 Identities=19% Similarity=0.266 Sum_probs=200.3
Q ss_pred CCCCceEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----C--CC-CCcccCcchhhHHHhhhc
Q 018632 31 DLCNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----G--SG-RAFCAGGDIVSLYHFMNQ 102 (353)
Q Consensus 31 ~~~~~v~~~~~-~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g--~g-~~F~aG~Dl~~~~~~~~~ 102 (353)
..++.|.+++. ++|+.|+||||+++|++.+....+|.+++..+..|++|.| | .| .+||+|+|-+--.....-
T Consensus 15 ~~y~dI~Y~~~~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY 94 (282)
T COG0447 15 EGYEDITYEKSVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGY 94 (282)
T ss_pred CCcceeEEeeccCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCc
Confidence 34667999988 9999999999999999999999999999999999999988 5 35 899999997543221000
Q ss_pred CChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcC
Q 018632 103 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 182 (353)
Q Consensus 103 ~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~ 182 (353)
.+.+....+ ...++-+.|+.+||||||.|+|+++|||-.|-+.||+-||+++|+|+....++|-+-++.++..|.|++
T Consensus 95 ~~d~~~~rL--nvLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~V 172 (282)
T COG0447 95 VDDDGIPRL--NVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIV 172 (282)
T ss_pred cCCccCccc--chhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHh
Confidence 000111111 123455678899999999999999999999999999999999999999999999998877888899999
Q ss_pred hHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHH
Q 018632 183 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDK 261 (353)
Q Consensus 183 g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (353)
|.. |+|+.+.++.++|+||+++|+||.|||-++|++....
T Consensus 173 GqKkArEIwfLcR~Y~A~eal~MGlVN~Vvp~~~LE~e~v~--------------------------------------- 213 (282)
T COG0447 173 GQKKAREIWFLCRQYDAEEALDMGLVNTVVPHADLEKETVQ--------------------------------------- 213 (282)
T ss_pred hhhhhHHhhhhhhhccHHHHHhcCceeeeccHHHHHHHHHH---------------------------------------
Confidence 999 9999999999999999999999999999999864443
Q ss_pred hcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChh
Q 018632 262 CFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 341 (353)
Q Consensus 262 ~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~ 341 (353)
| ++.|.+.||.|++..|..++...+ =..+++ |+.--..++ ++.+++.+
T Consensus 214 ------------------------W----~~E~l~kSP~AlR~LK~Afnad~D--GlaG~q-~~ag~at~L-~YmTdEa~ 261 (282)
T COG0447 214 ------------------------W----AREMLAKSPTALRMLKAAFNADCD--GLAGLQ-ELAGNATLL-YYMTDEAQ 261 (282)
T ss_pred ------------------------H----HHHHHhcChHHHHHHHHHhcCCCc--hhhHHH-HhcccceEE-EEechhhh
Confidence 3 788999999999999998874432 122222 222222222 34699999
Q ss_pred hhhhheeccCC
Q 018632 342 EVSNFQILNKH 352 (353)
Q Consensus 342 egi~afl~~~~ 352 (353)
||-.||++||+
T Consensus 262 EGr~AF~eKR~ 272 (282)
T COG0447 262 EGRDAFLEKRK 272 (282)
T ss_pred hhHHHHhhccC
Confidence 99999999996
No 88
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=100.00 E-value=1.4e-37 Score=274.70 Aligned_cols=186 Identities=33% Similarity=0.514 Sum_probs=169.5
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHH
Q 018632 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDF 111 (353)
Q Consensus 36 v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 111 (353)
+.++++++|++|+||+|++.|++|.+++.+|.++++.++.|+++++ |.|+.||+|+|++++...... .+....+
T Consensus 1 i~~~~~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~--~~~~~~~ 78 (195)
T cd06558 1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDA--GEEARAF 78 (195)
T ss_pred CEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccccc--chhHHHH
Confidence 4678889999999999998999999999999999999999999998 779999999999998764211 1135677
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHH
Q 018632 112 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 190 (353)
Q Consensus 112 ~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ 190 (353)
...++.++..+..++|||||+|||+|+|+|++++++||+||++++++|++||+++|++|+.|++++|++++|.. +.+++
T Consensus 79 ~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~ 158 (195)
T cd06558 79 IRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELL 158 (195)
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 223 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l 223 (353)
++|+.++++||+++|||+++++++++.+.+..+
T Consensus 159 l~g~~~~a~ea~~~Glv~~~~~~~~l~~~a~~~ 191 (195)
T cd06558 159 LTGRRISAEEALELGLVDEVVPDEELLAAALEL 191 (195)
T ss_pred HcCCccCHHHHHHcCCCCeecChhHHHHHHHHH
Confidence 999999999999999999999998776555444
No 89
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=3e-37 Score=307.40 Aligned_cols=195 Identities=13% Similarity=0.149 Sum_probs=161.9
Q ss_pred CCcCCCCceEEEEeCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHh-cCCCccc----CC-CCCcccCc
Q 018632 28 VTDDLCNQVLVEGKANSRMAILNRPS----------ALNALNTNMGAKLNKLFKAWE-NDPNIGF----GS-GRAFCAGG 91 (353)
Q Consensus 28 ~~~~~~~~v~~~~~~~v~~I~lnrp~----------~~Nal~~~~~~~L~~~l~~~~-~d~~v~v----g~-g~~F~aG~ 91 (353)
+.|+.++.+.++.+++|++||||||+ ++|+||.+|+.+|.++++.++ .|+++++ |. |++||+|.
T Consensus 5 ~~~~~~~~v~~~~~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~ 84 (546)
T TIGR03222 5 TEPSQYRHWKLTFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGA 84 (546)
T ss_pred CCCCCCceEEEEeeCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCc
Confidence 34444667999999999999999975 899999999999999999999 7899987 65 68999999
Q ss_pred chhhHHHhhhcCChHHHHHHH-HHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCc--eEEeccCCC-cc
Q 018632 92 DIVSLYHFMNQGKLEECKDFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IG 167 (353)
Q Consensus 92 Dl~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~--a~f~~pe~~-~G 167 (353)
|++++..... ........+. .....+...+..+||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|
T Consensus 85 DL~~~~~~~~-~~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lG 163 (546)
T TIGR03222 85 NIFMLGLSTH-AWKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLG 163 (546)
T ss_pred CHHHHhcccc-chhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccC
Confidence 9998753210 0011111111 11233455677899999999999999999999999999999986 799999997 99
Q ss_pred cccCccHHHHHh--hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 018632 168 FHPDAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 223 (353)
Q Consensus 168 ~~p~~g~~~~l~--r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l 223 (353)
++|++|++.+++ +.+|.. |++|++||+.++|+||+++||||+|||++++.+.+.++
T Consensus 164 l~P~~gg~~~l~~~~~vg~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~l 222 (546)
T TIGR03222 164 VLPGTGGLTRVTDKRRVRRDHADIFCTIEEGVRGKRAKEWRLVDEVVKPSQFDAAIAER 222 (546)
T ss_pred cCCccchhhhccccchhCHHHHHHHHHcCCCccHHHHHHcCCceEEeChHHHHHHHHHH
Confidence 999999998887 689998 99999999999999999999999999998887665555
No 90
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=256.84 Aligned_cols=244 Identities=19% Similarity=0.211 Sum_probs=215.0
Q ss_pred ceEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHH
Q 018632 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKD 110 (353)
Q Consensus 35 ~v~~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 110 (353)
...++.+++|..|+||+|++.|.++..|+.+|.+.|..-.++.++++ ..|+.||+|.||+++.+. ...+....
T Consensus 33 ~g~~~~~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e---~g~d~hae 109 (287)
T KOG1682|consen 33 LGLVKEHNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNE---PGSDIHAE 109 (287)
T ss_pred ccccccccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcC---ccchHHHH
Confidence 45566779999999999999999999999999999988887788777 789999999999999863 33455566
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHH
Q 018632 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 189 (353)
Q Consensus 111 ~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l 189 (353)
.+....+++.-|.++|+|||+-|||.+..+|+.|...||++||+++++|..|...+|++...-+. -|.|.+++. +.+|
T Consensus 110 vFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGv-AlaRavpRkva~~M 188 (287)
T KOG1682|consen 110 VFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGV-ALARAVPRKVAAYM 188 (287)
T ss_pred HHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcch-hHhhhcchhHHHHH
Confidence 77888899999999999999999999999999999999999999999999999999998665554 378999988 9999
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCcCCHH
Q 018632 190 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 269 (353)
Q Consensus 190 ~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (353)
++||.+++++||+..|||+++||.++++...+.
T Consensus 189 L~Tg~Pi~~eeAl~sGlvskvVp~~el~~e~~~----------------------------------------------- 221 (287)
T KOG1682|consen 189 LMTGLPITGEEALISGLVSKVVPAEELDKEIEE----------------------------------------------- 221 (287)
T ss_pred HHhCCCCchHHHHHhhhhhhcCCHHHHHHHHHH-----------------------------------------------
Confidence 999999999999999999999999999854443
Q ss_pred HHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhheec
Q 018632 270 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 349 (353)
Q Consensus 270 ~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~afl~ 349 (353)
+...|...|...+...|+.+..+...+-.+++..-.+.....+. -.|.+|||.+|++
T Consensus 222 --------------------i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~q---l~d~kegiasf~~ 278 (287)
T KOG1682|consen 222 --------------------ITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENFQ---LGDTKEGIASFFE 278 (287)
T ss_pred --------------------HHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhccc---ccchHHHHHHHhc
Confidence 36777788888888999999888888888888888888777776 8999999999999
Q ss_pred cCC
Q 018632 350 NKH 352 (353)
Q Consensus 350 ~~~ 352 (353)
||-
T Consensus 279 krp 281 (287)
T KOG1682|consen 279 KRP 281 (287)
T ss_pred cCC
Confidence 984
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=6.3e-36 Score=298.88 Aligned_cols=193 Identities=14% Similarity=0.165 Sum_probs=159.5
Q ss_pred cCCCCceEEEEeCCEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHHh-cCCCccc----CC-CCCcccCcch
Q 018632 30 DDLCNQVLVEGKANSRMAILNRP-------S---ALNALNTNMGAKLNKLFKAWE-NDPNIGF----GS-GRAFCAGGDI 93 (353)
Q Consensus 30 ~~~~~~v~~~~~~~v~~I~lnrp-------~---~~Nal~~~~~~~L~~~l~~~~-~d~~v~v----g~-g~~F~aG~Dl 93 (353)
+..++.+.++.+++|++|||||| + +.|+||.+|+.+|.++++.++ .|++|++ |. |++||+|+|+
T Consensus 11 ~~~~~~~~~e~~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL 90 (550)
T PRK08184 11 PSQYRHWKLSFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANI 90 (550)
T ss_pred CCCCceEEEEeeCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCH
Confidence 34566799999999999999965 4 899999999999999999999 7889887 75 5899999999
Q ss_pred hhHHHhhhcCChHHHHHHHHH-HHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCc--eEEeccCCC-cccc
Q 018632 94 VSLYHFMNQGKLEECKDFFRT-LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFH 169 (353)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~--a~f~~pe~~-~G~~ 169 (353)
+.+..... ........+... ...+...+..+||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++
T Consensus 91 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~ 169 (550)
T PRK08184 91 FMLGGSSH-AWKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVL 169 (550)
T ss_pred HhHhcccc-chhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccC
Confidence 98753210 000111111111 122445677899999999999999999999999999999987 899999997 9999
Q ss_pred cCccHHHHHh--hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 018632 170 PDAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 223 (353)
Q Consensus 170 p~~g~~~~l~--r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l 223 (353)
|++|++++++ +++|.. +.+|++||+.++|+||+++|||++++|++++.+.+.++
T Consensus 170 P~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA~~~GLVd~vv~~d~l~~~a~~~ 226 (550)
T PRK08184 170 PGTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRAVDWRLVDEVVKPSKFDAKVAER 226 (550)
T ss_pred CCcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHH
Confidence 9999999888 779998 99999999999999999999999999998887655444
No 92
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.73 E-value=6.1e-18 Score=147.23 Aligned_cols=139 Identities=17% Similarity=0.085 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHhcCCCccc--CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccc
Q 018632 61 NMGAKLNKLFKAWENDPNIGF--GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 138 (353)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~v--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~ 138 (353)
-.+.+|.++++.+.+|++|++ =. .+|.|+|+.... .+.+++..+..++|||||+++|.|.
T Consensus 22 ~~~~~l~~~l~~a~~d~~v~~vvl~--~~~~gg~~~~~~----------------~~~~~i~~~~~~~kpVia~v~G~a~ 83 (177)
T cd07014 22 VSGDTTAAQIRDARLDPKVKAIVLR--VNSPGGSVTASE----------------VIRAELAAARAAGKPVVASGGGNAA 83 (177)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEE--eeCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCchh
Confidence 356899999999999999987 11 168888875421 2334566677899999999999999
Q ss_pred cccccccccCCeEEEeCceEEeccCCCcccccCccHHH--------HHhhcCh--HH-HHHHHhcCCCCCHHHHHHcCcc
Q 018632 139 GGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF--------YLSHLPG--HL-GEFLALTGAKLNGAEMMACGLA 207 (353)
Q Consensus 139 GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~--------~l~r~~g--~~-a~~l~ltG~~~~a~eA~~~Glv 207 (353)
|+|+.|+++||+++++++++|+.+.+..+..+...... .+++..| .. ..+++..|..++|++|++.|||
T Consensus 84 g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~GLV 163 (177)
T cd07014 84 SGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANGLV 163 (177)
T ss_pred HHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcCCc
Confidence 99999999999999999999999988776443322222 4444555 55 7889999999999999999999
Q ss_pred ceecCCCChh
Q 018632 208 THYSVSEKLP 217 (353)
Q Consensus 208 ~~vv~~~~l~ 217 (353)
|+|.+.+++.
T Consensus 164 D~v~~~~e~~ 173 (177)
T cd07014 164 DSLGSFDDAV 173 (177)
T ss_pred ccCCCHHHHH
Confidence 9999876654
No 93
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.73 E-value=8.6e-18 Score=147.46 Aligned_cols=144 Identities=13% Similarity=0.092 Sum_probs=110.0
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCC--ccc--CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018632 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--IGF--GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 120 (353)
Q Consensus 45 ~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~--v~v--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (353)
++|.++. .++..+...+.+.|+.+..++. |.+ .+ -|+++.. ...++.
T Consensus 2 ~vv~i~g-----~I~~~~~~~l~~~l~~a~~~~~~~vvl~InS-----pGG~v~~-------------------~~~i~~ 52 (187)
T cd07020 2 YVLEING-----AITPATADYLERAIDQAEEGGADALIIELDT-----PGGLLDS-------------------TREIVQ 52 (187)
T ss_pred EEEEEee-----EEChHHHHHHHHHHHHHHhCCCCEEEEEEEC-----CCCCHHH-------------------HHHHHH
Confidence 5666653 3667778889999999887642 221 22 2233321 113455
Q ss_pred HHhhCCCcEEEEEc---cccccccccccccCCeEEEeCceEEeccCCCcccccCc--------------cHHHHHhhcCh
Q 018632 121 LLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA--------------GASFYLSHLPG 183 (353)
Q Consensus 121 ~l~~~~kpvIaav~---G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~--------------g~~~~l~r~~g 183 (353)
.|..+|||||++|+ |+|.|+|+.|+++||++|++++++|+.+++..|..+.. +....+++..|
T Consensus 53 ~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 132 (187)
T cd07020 53 AILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRG 132 (187)
T ss_pred HHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66789999999999 99999999999999999999999999999985544432 23456888888
Q ss_pred H--H-HHHHHhcCCCCCHHHHHHcCccceecCCC-Chh
Q 018632 184 H--L-GEFLALTGAKLNGAEMMACGLATHYSVSE-KLP 217 (353)
Q Consensus 184 ~--~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~-~l~ 217 (353)
. . +.+++++|+.++++||+++||||+++++. ++.
T Consensus 133 ~~~~~a~~~l~~g~~~~a~eA~~~Glvd~v~~~~~~~~ 170 (187)
T cd07020 133 RNAEWAEKAVRESLSLTAEEALKLGVIDLIAADLNELL 170 (187)
T ss_pred CCHHHHHHHHHcCCeecHHHHHHcCCcccccCCHHHHH
Confidence 7 5 89999999999999999999999999875 443
No 94
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.53 E-value=2.5e-14 Score=115.70 Aligned_cols=93 Identities=39% Similarity=0.721 Sum_probs=82.7
Q ss_pred HHHHHHHHhcCcCCHHHHHHHHHhccCCCCCchHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhh
Q 018632 254 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS 333 (353)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~a~~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~ 333 (353)
.....|+.||+.+++++|++.|+.. ..+|+.++++.|.++||.|+++|.++++++...++.++++.|+++..+++.
T Consensus 4 ~~~~~I~~~F~~~s~~eI~~~L~~~----~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~ 79 (118)
T PF13766_consen 4 EHLEAIDRCFSADSVEEIIEALEAD----GDEWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMR 79 (118)
T ss_dssp HCHHHHHHHTTSSSHHHHHHHHHHH----S-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHcc----CcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc
Confidence 3467899999999999999999993 679999999999999999999999999999999999999999999999998
Q ss_pred cCCCCChhhhhhheeccCCC
Q 018632 334 RLISGDFYEVSNFQILNKHV 353 (353)
Q Consensus 334 ~~~~~d~~egi~afl~~~~~ 353 (353)
.+||.|||+|.|+||++
T Consensus 80 ---~~DF~EGVRA~LIDKd~ 96 (118)
T PF13766_consen 80 ---HPDFAEGVRALLIDKDK 96 (118)
T ss_dssp ---CSCHHHHHHHHTTS---
T ss_pred ---cchHHHHHHHHHhcCCC
Confidence 89999999999999874
No 95
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.46 E-value=1.3e-13 Score=117.89 Aligned_cols=125 Identities=14% Similarity=0.148 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHhcCCCccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccc
Q 018632 61 NMGAKLNKLFKAWENDPNIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 137 (353)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a 137 (353)
.+...+.+.|+.+..+..+.+ +.|+ ++.. ...+...+..++||||+.++|.|
T Consensus 15 ~~~~~~~~~l~~~~~~~~i~l~inspGG------~~~~-------------------~~~i~~~i~~~~~pvi~~v~g~a 69 (160)
T cd07016 15 VTAKEFKDALDALGDDSDITVRINSPGG------DVFA-------------------GLAIYNALKRHKGKVTVKIDGLA 69 (160)
T ss_pred cCHHHHHHHHHhccCCCCEEEEEECCCC------CHHH-------------------HHHHHHHHHhcCCCEEEEEcchH
Confidence 567788888888888766665 4443 2211 12356667778999999999999
Q ss_pred ccccccccccCCeEEEeCceEEeccCCCcccccCccH---------------HHHHhhcCh--HH-HHHHHhcCCCCCHH
Q 018632 138 MGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA---------------SFYLSHLPG--HL-GEFLALTGAKLNGA 199 (353)
Q Consensus 138 ~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r~~g--~~-a~~l~ltG~~~~a~ 199 (353)
.|+|+.++++||+|+++++++|+++....|..+.... ...+.+..| .. ..+++.++..++++
T Consensus 70 ~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a~ 149 (160)
T cd07016 70 ASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTAQ 149 (160)
T ss_pred HhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcHH
Confidence 9999999999999999999999998877665544321 223667777 45 77777777889999
Q ss_pred HHHHcCcccee
Q 018632 200 EMMACGLATHY 210 (353)
Q Consensus 200 eA~~~Glv~~v 210 (353)
||+++||||+|
T Consensus 150 eA~~~GliD~v 160 (160)
T cd07016 150 EAVELGFADEI 160 (160)
T ss_pred HHHHcCCCCcC
Confidence 99999999985
No 96
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.46 E-value=9.4e-14 Score=124.20 Aligned_cols=87 Identities=20% Similarity=0.187 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHHHHHhcCCCcccCCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccc
Q 018632 59 NTNMGAKLNKLFKAWENDPNIGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 138 (353)
Q Consensus 59 ~~~~~~~L~~~l~~~~~d~~v~vg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~ 138 (353)
+.-.+.+|.++|+.+..|++|++=-=..||.|+|+..+.. +.+.+..+..++|||||+++|.|.
T Consensus 19 ~~~~~~~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~~~~----------------~~~~l~~~~~~~kpVia~v~g~a~ 82 (211)
T cd07019 19 GNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEV----------------IRAELAAARAAGKPVVVSAGGAAA 82 (211)
T ss_pred CccCHHHHHHHHHHHhhCCCceEEEEEEcCCCcCHHHHHH----------------HHHHHHHHHhCCCCEEEEECCeeh
Confidence 4456899999999999999998700027899999976532 223456677889999999999999
Q ss_pred cccccccccCCeEEEeCceEEec
Q 018632 139 GGGAGVSIPGTFRVACGKTVFAT 161 (353)
Q Consensus 139 GgG~~lal~cD~ria~~~a~f~~ 161 (353)
|+|+.|+++||++++++++.|+.
T Consensus 83 s~gy~la~~aD~i~a~~~a~~gs 105 (211)
T cd07019 83 SGGYWISTPANYIVANPSTLTGS 105 (211)
T ss_pred hHHHHHHHhCCEEEEcCCCEEEE
Confidence 99999999999999999998873
No 97
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.41 E-value=1e-12 Score=112.51 Aligned_cols=134 Identities=14% Similarity=0.100 Sum_probs=97.4
Q ss_pred CCHHHHHHHHHHHHHHhcCCCcccCCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccc
Q 018632 58 LNTNMGAKLNKLFKAWENDPNIGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 137 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~vg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a 137 (353)
+++.++.+|.+.|+.++.|+.++.=.=...|.|+|+... ..+...+..++||||+.++|.|
T Consensus 8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~~s~Gg~~~~~-------------------~~i~~~l~~~~kpvva~~~g~~ 68 (161)
T cd00394 8 IEDVSADQLAAQIRFAEADNSVKAIVLEVNTPGGRVDAG-------------------MNIVDALQASRKPVIAYVGGQA 68 (161)
T ss_pred EccchHHHHHHHHHHHHhCCCCceEEEEEECCCcCHHHH-------------------HHHHHHHHHhCCCEEEEECChh
Confidence 566889999999999999998775000113556665432 2244566678899999999999
Q ss_pred ccccccccccCCeEEEeCceEEeccCCCcccccCccHH------HHH----hh---------cChHH-HHHHHhcCCCCC
Q 018632 138 MGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS------FYL----SH---------LPGHL-GEFLALTGAKLN 197 (353)
Q Consensus 138 ~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~------~~l----~r---------~~g~~-a~~l~ltG~~~~ 197 (353)
.++|+.|+++||.|++.+++.|++..+..+.....+-. ..+ .+ ..... ..+++..|..++
T Consensus 69 ~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~~~~~ 148 (161)
T cd00394 69 ASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKDLVLT 148 (161)
T ss_pred HHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCCcEEc
Confidence 99999999999999999999999988876554322000 011 11 11222 466777899999
Q ss_pred HHHHHHcCcccee
Q 018632 198 GAEMMACGLATHY 210 (353)
Q Consensus 198 a~eA~~~Glv~~v 210 (353)
++||+++||||+|
T Consensus 149 a~eA~~~GLvD~i 161 (161)
T cd00394 149 AQEALEYGLVDAL 161 (161)
T ss_pred HHHHHHcCCcCcC
Confidence 9999999999975
No 98
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.36 E-value=3.1e-12 Score=114.63 Aligned_cols=94 Identities=19% Similarity=0.135 Sum_probs=69.0
Q ss_pred cCCCCCCC-CCHHHHHHHHHHHHHHhcCCCccc--CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCC
Q 018632 50 NRPSALNA-LNTNMGAKLNKLFKAWENDPNIGF--GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL 126 (353)
Q Consensus 50 nrp~~~Na-l~~~~~~~L~~~l~~~~~d~~v~v--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 126 (353)
++|...|+ ++..++.+|.++|+.+..|++|++ = +.+|.|+++... ..+.+.+..+.. +
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl--~~~s~gg~~~~~----------------~~l~~~l~~~~~-~ 73 (214)
T cd07022 13 PRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVL--DIDSPGGEVAGV----------------FELADAIRAARA-G 73 (214)
T ss_pred CCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEE--EEeCCCCcHHHH----------------HHHHHHHHHHhc-C
Confidence 35555565 457899999999999999999987 1 114456554322 112222333333 6
Q ss_pred CcEEEEEccccccccccccccCCeEEEeCceEEecc
Q 018632 127 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 162 (353)
Q Consensus 127 kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~p 162 (353)
|||||+++|.|.|+|+.|+++||++++++++.|+..
T Consensus 74 KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~i 109 (214)
T cd07022 74 KPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSI 109 (214)
T ss_pred CCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEee
Confidence 999999999999999999999999999999998654
No 99
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.30 E-value=1e-11 Score=126.45 Aligned_cols=161 Identities=18% Similarity=0.220 Sum_probs=113.5
Q ss_pred EeCCEEEEEEcCCCC--CCCCCHHHHHHHHHHHHHHhcCCCccc------CC-CCCcccCcchhhHHHhhhcCChHHHHH
Q 018632 40 GKANSRMAILNRPSA--LNALNTNMGAKLNKLFKAWENDPNIGF------GS-GRAFCAGGDIVSLYHFMNQGKLEECKD 110 (353)
Q Consensus 40 ~~~~v~~I~lnrp~~--~Nal~~~~~~~L~~~l~~~~~d~~v~v------g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 110 (353)
.++.|++|+++.+=. .|..+....+.+.+.|+.+..|++|++ +. |..|++ ..
T Consensus 306 ~~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrinSpGGs~~as----e~--------------- 366 (584)
T TIGR00705 306 VQDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRINSPGGSVFAS----EI--------------- 366 (584)
T ss_pred CCCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEecCCCCCHHHH----HH---------------
Confidence 467899999986532 233333345678888999999999887 22 344443 11
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEE------eccC------CCcccccCccHHHHH
Q 018632 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF------ATPE------TLIGFHPDAGASFYL 178 (353)
Q Consensus 111 ~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f------~~pe------~~~G~~p~~g~~~~l 178 (353)
+.+.+..+...+||||+.++|.|.+||..++++||.++|++.+.+ +.+. .++|+.|+...+..+
T Consensus 367 ----i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~ 442 (584)
T TIGR00705 367 ----IRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHEL 442 (584)
T ss_pred ----HHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCc
Confidence 122334455678999999999999999999999999999999877 5553 578998876655433
Q ss_pred hh----------------------------c------ChHHHHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHH
Q 018632 179 SH----------------------------L------PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 224 (353)
Q Consensus 179 ~r----------------------------~------~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~ 224 (353)
.. . +.....+.+.+|+.++++||+++||||++- .++++.+.++
T Consensus 443 ~~~s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig---~~~~Ai~~a~ 519 (584)
T TIGR00705 443 ANVSLLRPLTAEDQAIMQLSVEAGYRRFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALG---GLDEAVAKAA 519 (584)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCC---CHHHHHHHHH
Confidence 32 2 222256788899999999999999999994 3444444333
Q ss_pred hh
Q 018632 225 KL 226 (353)
Q Consensus 225 ~~ 226 (353)
++
T Consensus 520 ~l 521 (584)
T TIGR00705 520 KL 521 (584)
T ss_pred HH
Confidence 33
No 100
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.24 E-value=4.6e-11 Score=106.65 Aligned_cols=100 Identities=19% Similarity=0.144 Sum_probs=74.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcccCCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHh
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 123 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~vg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 123 (353)
|++|.++-+=... .+.++.+|.+.|+.+..|+++++=.=..+|.|+|+.... .+.+.+..+.
T Consensus 2 v~vi~i~g~i~~~--~~~~~~~l~~~l~~a~~d~~i~~ivl~~~s~Gg~~~~~~----------------~i~~~i~~~~ 63 (208)
T cd07023 2 IAVIDIEGTISDG--GGIGADSLIEQLRKAREDDSVKAVVLRINSPGGSVVASE----------------EIYREIRRLR 63 (208)
T ss_pred EEEEEEEEEEcCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEEECCCCCHHHHH----------------HHHHHHHHHH
Confidence 5666665431101 378999999999999999998870001147788875421 1233556677
Q ss_pred hCCCcEEEEEccccccccccccccCCeEEEeCceEEec
Q 018632 124 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 161 (353)
Q Consensus 124 ~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~ 161 (353)
.++|||||+++|.|.|+|+.|+++||.+++++.+.|+.
T Consensus 64 ~~~kpvia~v~g~~~s~g~~lA~aaD~i~a~~~s~~g~ 101 (208)
T cd07023 64 KAKKPVVASMGDVAASGGYYIAAAADKIVANPTTITGS 101 (208)
T ss_pred hcCCcEEEEECCcchhHHHHHHhhCCEEEECCCCeEEe
Confidence 78999999999999999999999999999999998864
No 101
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=99.13 E-value=3.5e-10 Score=98.19 Aligned_cols=135 Identities=16% Similarity=0.243 Sum_probs=95.0
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCC--ccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018632 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--IGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 119 (353)
Q Consensus 45 ~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~--v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 119 (353)
.+|.++.+ +++.+...+.+.|+.+.+++. +.+ ..| +++ .....+.
T Consensus 2 ~vi~i~g~-----I~~~~~~~l~~~l~~a~~~~~~~ivl~inspG------G~v-------------------~~~~~I~ 51 (178)
T cd07021 2 YVIPIEGE-----IDPGLAAFVERALKEAKEEGADAVVLDIDTPG------GRV-------------------DSALEIV 51 (178)
T ss_pred EEEEEeeE-----ECHHHHHHHHHHHHHHHhCCCCeEEEEEECcC------CCH-------------------HHHHHHH
Confidence 45566533 667788889999999988752 222 222 222 2223456
Q ss_pred HHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccH--------HHH------HhhcChHH
Q 018632 120 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA--------SFY------LSHLPGHL 185 (353)
Q Consensus 120 ~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~--------~~~------l~r~~g~~ 185 (353)
..|..+++|||+.|+|.|.++|+.++++||++++++++.|+.+++ ++..|+ +.. +...-|+.
T Consensus 52 ~~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~----v~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~ 127 (178)
T cd07021 52 DLILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEP----IPGDGNGAADEKVQSYWRAKMRAAAEKKGRD 127 (178)
T ss_pred HHHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCee----EcCCCccchhHHHHHHHHHHHHHHHHHhCCC
Confidence 677789999999999999999999999999999999999998844 333332 111 22223432
Q ss_pred ---HHHHHhcC-------------CCCCHHHHHHcCccceecCC
Q 018632 186 ---GEFLALTG-------------AKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 186 ---a~~l~ltG-------------~~~~a~eA~~~Glv~~vv~~ 213 (353)
+..|+-.. -.++++||++.|++|.++++
T Consensus 128 ~~~a~~mv~~~~~v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~ 171 (178)
T cd07021 128 PDIAEAMVDKDIEVPGVGIKGGELLTLTADEALKVGYAEGIAGS 171 (178)
T ss_pred HHHHHHHhhhhcccccccccccceeeeCHHHHHHhCCeEEEECC
Confidence 45555544 27999999999999999864
No 102
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=99.12 E-value=2.4e-10 Score=101.86 Aligned_cols=148 Identities=17% Similarity=0.135 Sum_probs=96.2
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 122 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 122 (353)
|++|+++-+= + ....+|.+.|+.+..|++|+. =- ...|.|+++... .++...|
T Consensus 2 v~vi~i~g~i-----~-~s~~~l~~~l~~a~~d~~i~~vvl-~~~s~Gg~~~~~-------------------~~l~~~i 55 (207)
T TIGR00706 2 IAILPVSGAI-----A-VSPEDFDKKIKRIKDDKSIKALLL-RINSPGGTVVAS-------------------EEIYEKL 55 (207)
T ss_pred EEEEEEEEEE-----e-cCHHHHHHHHHHHhhCCCccEEEE-EecCCCCCHHHH-------------------HHHHHHH
Confidence 5666665442 1 335788999999999999886 00 113667766432 2234445
Q ss_pred hhCC--CcEEEEEccccccccccccccCCeEEEeCceEEeccCCC------------cccccC------------c--cH
Q 018632 123 GTHL--KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD------------A--GA 174 (353)
Q Consensus 123 ~~~~--kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~------------~G~~p~------------~--g~ 174 (353)
..++ |||||.++|.|.|+|+.|+++||.+++++++.++.-.+. +|+-+. . ..
T Consensus 56 ~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~ 135 (207)
T TIGR00706 56 KKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTREL 135 (207)
T ss_pred HHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCC
Confidence 5555 999999999999999999999999999999887653322 233210 0 00
Q ss_pred H----HHHh-----------------hcChHHHHHHHhcCCCCCHHHHHHcCccceecCCCChh
Q 018632 175 S----FYLS-----------------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLP 217 (353)
Q Consensus 175 ~----~~l~-----------------r~~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~ 217 (353)
+ ..+. |-+.....+=++.|+.+++++|++.||||++...+++.
T Consensus 136 s~~~~e~~~~~l~~~~~~f~~~va~~R~~~~~~~~~~~~~~~~~~~~A~~~gLvD~i~~~~~~~ 199 (207)
T TIGR00706 136 TPEERDILQNLVNESYEQFVQVVAKGRNLPVEDVKKFADGRVFTGRQALKLRLVDKLGTEDDAL 199 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHHH
Confidence 0 0111 11122212234688999999999999999998655543
No 103
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=98.92 E-value=4.8e-09 Score=94.54 Aligned_cols=138 Identities=13% Similarity=0.002 Sum_probs=95.5
Q ss_pred CCHHHHHHHHHHHHHHhcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 018632 58 LNTNMGAKLNKLFKAWENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 133 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav 133 (353)
-+...+.+|.+.|+.+..|++|++ ..+..| ++.++.++. +.+..+...+|||||.+
T Consensus 26 ~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el~-------------------~~i~~~~~~~kpVia~~ 85 (222)
T cd07018 26 SSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEELR-------------------QALERFRASGKPVIAYA 85 (222)
T ss_pred cCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHHH-------------------HHHHHHHHhCCeEEEEe
Confidence 446778899999999999999998 444445 666665543 23344555799999999
Q ss_pred ccccccccccccccCCeEEEeCceEEeccCCC------------cccccC---------ccHHHH-----------Hhhc
Q 018632 134 NGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AGASFY-----------LSHL 181 (353)
Q Consensus 134 ~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~------------~G~~p~---------~g~~~~-----------l~r~ 181 (353)
+| |.++|+.|+++||.+++.+.+.|+...+. +|+-+. .+..+. +..+
T Consensus 86 ~~-~~sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~ 164 (222)
T cd07018 86 DG-YSQGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQAL 164 (222)
T ss_pred CC-CCchhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHH
Confidence 98 88999999999999999999999985332 222111 011110 0111
Q ss_pred C-----------------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 018632 182 P-----------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 216 (353)
Q Consensus 182 ~-----------------g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l 216 (353)
+ .....+-+..|..+++++|++.||||++...+++
T Consensus 165 l~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~~~~A~~~GLvD~i~~~~e~ 216 (222)
T cd07018 165 LDSLWDQYLADVAASRGLSPDALEALIDLGGDSAEEALEAGLVDGLAYRDEL 216 (222)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCcHHHHHHHCCCCCcCCcHHHH
Confidence 1 1111223455899999999999999999965554
No 104
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.57 E-value=5.6e-07 Score=77.47 Aligned_cols=131 Identities=11% Similarity=0.203 Sum_probs=92.3
Q ss_pred CCHHHHHHHHHHHHHHhcCCC--ccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 018632 58 LNTNMGAKLNKLFKAWENDPN--IGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 132 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~--v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaa 132 (353)
+++.+...|.+.++.+.+++. +.+ ..| +.+.. ...++..+...++||++.
T Consensus 10 I~~~~~~~l~~~l~~A~~~~~~~i~l~inSPG------G~v~~-------------------~~~I~~~i~~~~~pvv~~ 64 (172)
T cd07015 10 ITSYTYDQFDRYITIAEQDNAEAIIIELDTPG------GRADA-------------------AGNIVQRIQQSKIPVIIY 64 (172)
T ss_pred ECHhHHHHHHHHHHHHhcCCCCeEEEEEECCC------CCHHH-------------------HHHHHHHHHhcCcCEEEE
Confidence 667788888899998876542 222 333 22221 123445566789999999
Q ss_pred Ec---cccccccccccccCCeEEEeCceEEeccCCCcccccC----c-c---HHHH------HhhcChH--H-HHHHHhc
Q 018632 133 LN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD----A-G---ASFY------LSHLPGH--L-GEFLALT 192 (353)
Q Consensus 133 v~---G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~----~-g---~~~~------l~r~~g~--~-a~~l~lt 192 (353)
|+ |.|..+|..++++||.+++.+++.++...+..|..+. . . .+.. +.+.-|+ . +..++-.
T Consensus 65 v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~ 144 (172)
T cd07015 65 VYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITK 144 (172)
T ss_pred EecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHh
Confidence 99 9999999999999999999999999988775443220 0 0 0111 1222343 2 6777778
Q ss_pred CCCCCHHHHHHcCccceecCC
Q 018632 193 GAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 193 G~~~~a~eA~~~Glv~~vv~~ 213 (353)
...++++||+++|++|.|+.+
T Consensus 145 ~~~lta~EA~~~G~iD~ia~~ 165 (172)
T cd07015 145 DLSLTPEEALKYGVIEVVARD 165 (172)
T ss_pred hcCcCHHHHHHcCCceeeeCC
Confidence 888999999999999999975
No 105
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.44 E-value=8.3e-07 Score=78.64 Aligned_cols=132 Identities=17% Similarity=0.110 Sum_probs=85.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCC---Cccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018632 57 ALNTNMGAKLNKLFKAWENDP---NIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 130 (353)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~---~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvI 130 (353)
.++.++...+...|..++.++ .|.+ +.| +|+.. ...++..|...+.|++
T Consensus 39 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~InSpG------G~v~~-------------------g~~I~d~i~~~~~~v~ 93 (200)
T PRK00277 39 EVEDHMANLIVAQLLFLEAEDPDKDIYLYINSPG------GSVTA-------------------GLAIYDTMQFIKPDVS 93 (200)
T ss_pred EECHHHHHHHHHHHHHhhccCCCCCEEEEEECCC------CcHHH-------------------HHHHHHHHHhcCCCEE
Confidence 377889999999998887653 3444 333 23221 1224455666788999
Q ss_pred EEEccccccccccccccC--CeEEEeCceEEeccCCCcccccCccH---------------HHHHhhcChH--H-HHHHH
Q 018632 131 AILNGVTMGGGAGVSIPG--TFRVACGKTVFATPETLIGFHPDAGA---------------SFYLSHLPGH--L-GEFLA 190 (353)
Q Consensus 131 aav~G~a~GgG~~lal~c--D~ria~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r~~g~--~-a~~l~ 190 (353)
+.+.|.|.++|..+++++ +.|++.++++|.+....-|......- ...+....|. . ..+++
T Consensus 94 t~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~~ 173 (200)
T PRK00277 94 TICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKDT 173 (200)
T ss_pred EEEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 999999999999998874 35777777777665443221100000 0122333343 2 45566
Q ss_pred hcCCCCCHHHHHHcCccceecCC
Q 018632 191 LTGAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~ 213 (353)
-.+.-++|+||+++||||+|+..
T Consensus 174 ~~~~~lsa~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 174 DRDNFMSAEEAKEYGLIDEVLTK 196 (200)
T ss_pred hCCccccHHHHHHcCCccEEeec
Confidence 67788999999999999999965
No 106
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.41 E-value=1.2e-07 Score=88.94 Aligned_cols=165 Identities=19% Similarity=0.051 Sum_probs=133.5
Q ss_pred CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc----CCC-CCcccCcchhhHHHhhhcCChHHHHHHHHHHHH
Q 018632 43 NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF----GSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYS 117 (353)
Q Consensus 43 ~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v----g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 117 (353)
++..+.++ |+ -|..|.++..+|..-|+.+..+..++. +.. +.|++|.|..++... .......++-++.+
T Consensus 66 ~~~~~dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg----~h~fspa~~m~LlE 139 (380)
T KOG1683|consen 66 GFANADMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVG----MHFFSPAHWMQLLE 139 (380)
T ss_pred ccccccee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhcc----ccccCHHHHHHHHH
Confidence 67888888 54 499999999999999999999988887 333 889999999988753 44455566778889
Q ss_pred HHHHHhhCCCcEEEEEcccccccc--ccccccCCeEEEe--CceEEeccCCCcccccCccHHHHHhhcChHH-HHHHHhc
Q 018632 118 FIYLLGTHLKPHVAILNGVTMGGG--AGVSIPGTFRVAC--GKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT 192 (353)
Q Consensus 118 l~~~l~~~~kpvIaav~G~a~GgG--~~lal~cD~ria~--~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~lt 192 (353)
++....+++.|+.+++||++--|| +.++-+|+|++.. ..-..+..+...|+..+..-.-.+...+|.. +-.-+--
T Consensus 140 ii~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~fGf~~g~~~L~d 219 (380)
T KOG1683|consen 140 IILALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITKFGFRVGERALAD 219 (380)
T ss_pred HHHhcCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHhcCccccHHHHhh
Confidence 999999999999999999999898 8899999999998 4444467888877544333444455667776 5555667
Q ss_pred CCCCCHHHHHHcCccceecCC
Q 018632 193 GAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 193 G~~~~a~eA~~~Glv~~vv~~ 213 (353)
|.-++..||++-|+++.+.|.
T Consensus 220 ~~gfdv~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 220 GVGFDVAEALAVGLGDEIGPR 240 (380)
T ss_pred ccCccHHHHHhhccchhccch
Confidence 888999999999999999986
No 107
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.38 E-value=3.6e-05 Score=70.50 Aligned_cols=135 Identities=16% Similarity=0.118 Sum_probs=92.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCC--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 55 LNALNTNMGAKLNKLFKAWENDPN--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
.-+++++-+....+.++.+++..- |.+ -.++++. |.+-. .......+.+++..+...++|+|+
T Consensus 76 ~G~~~~~g~rKa~R~~~lA~~~~lPvV~lvDtpGa~~-g~~aE-------------~~G~~~~ia~~~~~~s~~~VP~Is 141 (256)
T PRK12319 76 FGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYP-GVGAE-------------ERGQGEAIARNLMEMSDLKVPIIA 141 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCcCC-CHhHH-------------hccHHHHHHHHHHHHhCCCCCEEE
Confidence 456889999999999988876533 333 2223332 33211 011234455677778889999999
Q ss_pred EEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH-H-HHHHHhcCCCCCHHHHHHcCccce
Q 018632 132 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L-GEFLALTGAKLNGAEMMACGLATH 209 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~-a~~l~ltG~~~~a~eA~~~Glv~~ 209 (353)
.|-|.|.|||......||++++.+++.++.- .|.+ .+..+.+--.. . +.+.+ .+++.++.+.|+||.
T Consensus 142 VI~G~~~gGgA~a~~~~D~v~m~~~a~~~v~------~pe~-~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD~ 210 (256)
T PRK12319 142 IIIGEGGSGGALALAVADQVWMLENTMYAVL------SPEG-FASILWKDGSRATEAAELM----KITAGELLEMGVVDK 210 (256)
T ss_pred EEeCCcCcHHHHHhhcCCEEEEecCceEEEc------CHHH-HHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCcE
Confidence 9999999998888889999999999887642 3443 44344332222 2 44443 789999999999999
Q ss_pred ecCCC
Q 018632 210 YSVSE 214 (353)
Q Consensus 210 vv~~~ 214 (353)
|+|..
T Consensus 211 ii~e~ 215 (256)
T PRK12319 211 VIPEH 215 (256)
T ss_pred ecCCC
Confidence 99854
No 108
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.38 E-value=1.9e-06 Score=73.82 Aligned_cols=126 Identities=13% Similarity=0.096 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHHhcCCCcc---c---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 58 LNTNMGAKLNKLFKAWENDPNIG---F---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~---v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
++..+..++...|..++.++.++ + +.|+ ++. ....++..+...++||++
T Consensus 9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~InSpGG------~v~-------------------~~~~i~~~i~~~~~~v~~ 63 (162)
T cd07013 9 VEDISANQFAAQLLFLGAVNPEKDIYLYINSPGG------DVF-------------------AGMAIYDTIKFIKADVVT 63 (162)
T ss_pred ECcHHHHHHHHHHHHHhcCCCCCCEEEEEECCCC------cHH-------------------HHHHHHHHHHhcCCCceE
Confidence 56788899999999998875433 3 4442 221 122355566678899999
Q ss_pred EEccccccccccccccCC--eEEEeCceEEeccCCCcccccCccHH--H---------------HHhhcChH--H-HHHH
Q 018632 132 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS--F---------------YLSHLPGH--L-GEFL 189 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~g~~--~---------------~l~r~~g~--~-a~~l 189 (353)
.+.|.|.++|..++++|| .|++.++++|.+....-|.. +... . .+.+..|. . ..++
T Consensus 64 ~~~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~--g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~ 141 (162)
T cd07013 64 IIDGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTL--GDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHAD 141 (162)
T ss_pred EEEeehhhHHHHHHHcCCCCcEEEecCEEEEEccCccccc--CCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999999999999999999 68888888887654322211 1111 0 11112232 2 3455
Q ss_pred HhcCCCCCHHHHHHcCcccee
Q 018632 190 ALTGAKLNGAEMMACGLATHY 210 (353)
Q Consensus 190 ~ltG~~~~a~eA~~~Glv~~v 210 (353)
+-.+.-++|+||+++||||++
T Consensus 142 ~~~~~~~sa~eA~~~GliD~i 162 (162)
T cd07013 142 LERDTWLSAREAVEYGFADTI 162 (162)
T ss_pred HcCCccccHHHHHHcCCCCcC
Confidence 556666799999999999985
No 109
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.33 E-value=1.6e-05 Score=74.47 Aligned_cols=135 Identities=15% Similarity=0.070 Sum_probs=92.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCC--Cccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 55 LNALNTNMGAKLNKLFKAWENDP--NIGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~--~v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
.-.++++-+....+.++.++... -|.+ -.+++++ |.+-.+ ......+.+.+..+....+|+|+
T Consensus 132 ~G~~~p~g~rKa~Rlm~lA~~f~lPIItlvDTpGA~~-G~~AE~-------------~G~~~aiar~l~~~a~~~VP~Is 197 (322)
T CHL00198 132 FGMPSPGGYRKALRLMKHANKFGLPILTFIDTPGAWA-GVKAEK-------------LGQGEAIAVNLREMFSFEVPIIC 197 (322)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcCc-CHHHHH-------------HhHHHHHHHHHHHHHcCCCCEEE
Confidence 45688999999999999887653 3333 3333343 322211 11234455566677889999999
Q ss_pred EEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH-H-HHHHHhcCCCCCHHHHHHcCccce
Q 018632 132 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L-GEFLALTGAKLNGAEMMACGLATH 209 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~-a~~l~ltG~~~~a~eA~~~Glv~~ 209 (353)
.|-|.|.|||......||++++.+++.++.- .|.+.++ .|.+--.. . |.+ .-+++|++++++|+||+
T Consensus 198 VViGeggsGGAlal~~aD~V~m~e~a~~sVi------sPEg~a~-Il~~d~~~a~~aA~----~~~ita~dL~~~giiD~ 266 (322)
T CHL00198 198 TIIGEGGSGGALGIGIGDSIMMLEYAVYTVA------TPEACAA-ILWKDSKKSLDAAE----ALKITSEDLKVLGIIDE 266 (322)
T ss_pred EEeCcccHHHHHhhhcCCeEEEeCCeEEEec------CHHHHHH-HHhcchhhHHHHHH----HcCCCHHHHHhCCCCeE
Confidence 9999998888665566999999999988742 3444444 44443322 2 333 46899999999999999
Q ss_pred ecCCC
Q 018632 210 YSVSE 214 (353)
Q Consensus 210 vv~~~ 214 (353)
|+|..
T Consensus 267 ii~Ep 271 (322)
T CHL00198 267 IIPEP 271 (322)
T ss_pred eccCC
Confidence 99843
No 110
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.25 E-value=3.7e-06 Score=74.91 Aligned_cols=129 Identities=16% Similarity=0.097 Sum_probs=93.1
Q ss_pred CCHHHHHHHHHHHHHHhcCC---Cccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 58 LNTNMGAKLNKLFKAWENDP---NIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~---~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
++.++..++...|..++.++ .|.+ +.| +++.. ...++..|..++.||++
T Consensus 44 I~~~~~~~i~~~L~~l~~~~~~~~I~l~INSpG------G~v~~-------------------g~~I~d~i~~~~~~v~t 98 (207)
T PRK12553 44 VDDASANDVMAQLLVLESIDPDRDITLYINSPG------GSVTA-------------------GDAIYDTIQFIRPDVQT 98 (207)
T ss_pred ECHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCC------CcHHH-------------------HHHHHHHHHhcCCCcEE
Confidence 78899999999999988644 3444 333 33321 12345566677889999
Q ss_pred EEccccccccccccccCC--eEEEeCceEEeccCCCc-ccccCccH------------------HHHHhhcChH--H-HH
Q 018632 132 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLI-GFHPDAGA------------------SFYLSHLPGH--L-GE 187 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD--~ria~~~a~f~~pe~~~-G~~p~~g~------------------~~~l~r~~g~--~-a~ 187 (353)
.+.|.|.+.|..++++|| .|++.+++.|.+..... |. ..|. ...+....|. . ..
T Consensus 99 ~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~--~~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~ 176 (207)
T PRK12553 99 VCTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGG--IRGQASDLEIQAREILRMRERLERILAEHTGQSVEKIR 176 (207)
T ss_pred EEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCC--CccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999 59999999999977653 21 1111 1123333343 2 56
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCC
Q 018632 188 FLALTGAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 188 ~l~ltG~~~~a~eA~~~Glv~~vv~~ 213 (353)
+++-.+.-++|+||+++||||+|+++
T Consensus 177 ~~~~~~~~lta~EA~e~GliD~I~~~ 202 (207)
T PRK12553 177 KDTDRDKWLTAEEAKDYGLVDQIITS 202 (207)
T ss_pred HHHhcCccccHHHHHHcCCccEEcCc
Confidence 67777889999999999999999965
No 111
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=98.20 E-value=4.1e-05 Score=73.67 Aligned_cols=134 Identities=16% Similarity=0.084 Sum_probs=90.0
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCC--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 018632 56 NALNTNMGAKLNKLFKAWENDPN--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 132 (353)
Q Consensus 56 Nal~~~~~~~L~~~l~~~~~d~~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaa 132 (353)
.+++++-+......++.++...- |.+ -.++++ .|.+..+ ......+.+.+..+....+|+|+.
T Consensus 200 G~~~peGyRKAlR~mklAekf~lPIVtLVDTpGA~-pG~~AEe-------------~Gqa~aIAr~l~ams~l~VPiISV 265 (431)
T PLN03230 200 AMPQPNGYRKALRFMRHAEKFGFPILTFVDTPGAY-AGIKAEE-------------LGQGEAIAFNLREMFGLRVPIIAT 265 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcC-CCHHHHH-------------HhHHHHHHHHHHHHhcCCCCEEEE
Confidence 46889999999999998876533 333 222233 2222211 112344566777888999999999
Q ss_pred EccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHHhcCCCCCHHHHHHcCccceec
Q 018632 133 LNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYS 211 (353)
Q Consensus 133 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv 211 (353)
|-|.+.+||.....+||++++.+++.++.- .|.+.++.++....-.. +.+ .-.++|.++++.|+||.|+
T Consensus 266 ViGeGgSGGAlalg~aD~VlMle~A~ysVi------sPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~II 335 (431)
T PLN03230 266 VIGEGGSGGALAIGCGNRMLMMENAVYYVA------SPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDEIV 335 (431)
T ss_pred EeCCCCcHHHHHhhcCCEEEEecCCEEEec------CHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeEec
Confidence 999996666555557899999999876642 34444444333322222 444 3389999999999999999
Q ss_pred CC
Q 018632 212 VS 213 (353)
Q Consensus 212 ~~ 213 (353)
|.
T Consensus 336 ~E 337 (431)
T PLN03230 336 PE 337 (431)
T ss_pred cC
Confidence 75
No 112
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=98.20 E-value=3.4e-05 Score=78.68 Aligned_cols=134 Identities=13% Similarity=0.031 Sum_probs=92.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhcC--CCccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 55 LNALNTNMGAKLNKLFKAWEND--PNIGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d--~~v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
.-+++++-+....+.++.++.. |-|.+ -.+++++ |.+... ......+.+.+..+....+|+|+
T Consensus 220 fG~~~peGyRKAlRlmkLAekfgLPIVtLVDTpGA~p-G~~AEe-------------~Gq~~aIArnl~amasl~VP~IS 285 (762)
T PLN03229 220 FGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYA-DLKSEE-------------LGQGEAIAHNLRTMFGLKVPIVS 285 (762)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCcCC-CchhHH-------------HhHHHHHHHHHHHHhCCCCCEEE
Confidence 4577888899999998888764 33443 2223332 322221 12234556677778889999999
Q ss_pred EEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH-H-HHHHHhcCCCCCHHHHHHcCccce
Q 018632 132 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L-GEFLALTGAKLNGAEMMACGLATH 209 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~-a~~l~ltG~~~~a~eA~~~Glv~~ 209 (353)
.|-|.|.|||......||++++.+++.++. +.|.++ +.++.+-... . |.+ .-.++|++++++|+||.
T Consensus 286 VViGeggSGGAlA~g~aD~VlMle~A~~sV------isPEga-AsILwkd~~~A~eAAe----~lkiTa~dL~~lGiiD~ 354 (762)
T PLN03229 286 IVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEAC-AAILWKSAKAAPKAAE----KLRITAQELCRLQIADG 354 (762)
T ss_pred EEeCCcchHHHHHhhcCCEEEEecCCeEEe------cCHHHH-HHHHhcCcccHHHHHH----HcCCCHHHHHhCCCCee
Confidence 999999888888777899999999887654 234444 4444333322 2 433 46899999999999999
Q ss_pred ecCC
Q 018632 210 YSVS 213 (353)
Q Consensus 210 vv~~ 213 (353)
|+|.
T Consensus 355 IIpE 358 (762)
T PLN03229 355 IIPE 358 (762)
T ss_pred eccC
Confidence 9984
No 113
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.17 E-value=5.2e-05 Score=71.13 Aligned_cols=135 Identities=14% Similarity=0.044 Sum_probs=90.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCC--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 55 LNALNTNMGAKLNKLFKAWENDPN--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
.-+++++-+....+.++.++.-.- |.+ -.+++++ |.+... ......+.+++..+....+|+|+
T Consensus 129 ~G~~~p~g~rKa~R~m~lA~~f~iPvVtlvDTpGa~~-g~~aE~-------------~G~~~aia~~l~a~s~~~VP~Is 194 (316)
T TIGR00513 129 FGMPAPEGYRKALRLMKMAERFKMPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLGVPVIC 194 (316)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCCC-CHHHHH-------------HHHHHHHHHHHHHHHcCCCCEEE
Confidence 356889999999999988876533 333 2222332 322211 11234456677778889999999
Q ss_pred EEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcCh-HH-HHHHHhcCCCCCHHHHHHcCccce
Q 018632 132 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HL-GEFLALTGAKLNGAEMMACGLATH 209 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g-~~-a~~l~ltG~~~~a~eA~~~Glv~~ 209 (353)
.|-|.|.|||......||++++.+++.++. .++-|.+.++.+--. .. +.+. ..+++.++++.|+||.
T Consensus 195 VViGeggsGGAla~~~aD~v~m~~~a~~sV-------isPEg~a~Il~kd~~~a~~aae~----~~~ta~~l~~~G~iD~ 263 (316)
T TIGR00513 195 TVIGEGGSGGALAIGVGDKVNMLEYSTYSV-------ISPEGCAAILWKDASKAPKAAEA----MKITAPDLKELGLIDS 263 (316)
T ss_pred EEecccccHHHhhhccCCEEEEecCceEEe-------cCHHHHHHHhccchhhHHHHHHH----ccCCHHHHHHCCCCeE
Confidence 999999888776556799999999987763 333344444443222 12 3332 6778999999999999
Q ss_pred ecCCC
Q 018632 210 YSVSE 214 (353)
Q Consensus 210 vv~~~ 214 (353)
|+|..
T Consensus 264 II~ep 268 (316)
T TIGR00513 264 IIPEP 268 (316)
T ss_pred eccCC
Confidence 99843
No 114
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=98.15 E-value=6e-06 Score=71.34 Aligned_cols=128 Identities=16% Similarity=0.107 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHHHHHHhcCCC---ccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 58 LNTNMGAKLNKLFKAWENDPN---IGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~---v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
++.++..++...+..+..++. |.+ +.|+ |+.. ...++..+...+.||++
T Consensus 18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~inSpGG------~v~~-------------------~~~i~~~l~~~~~~v~t 72 (171)
T cd07017 18 IDDEVANLIIAQLLYLESEDPKKPIYLYINSPGG------SVTA-------------------GLAIYDTMQYIKPPVST 72 (171)
T ss_pred EcHHHHHHHHHHHHHHHccCCCCceEEEEECCCC------CHHH-------------------HHHHHHHHHhcCCCEEE
Confidence 677888999999988887644 333 3333 3221 11244455567899999
Q ss_pred EEccccccccccccccCC--eEEEeCceEEeccCCCcccccCccH---------------HHHHhhcChH--H-HHHHHh
Q 018632 132 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGA---------------SFYLSHLPGH--L-GEFLAL 191 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r~~g~--~-a~~l~l 191 (353)
.+.|.|.++|..+++++| .|++.+++.|.+.+...+..-...- ...+....|. . ..+++-
T Consensus 73 ~~~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~ 152 (171)
T cd07017 73 ICLGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTD 152 (171)
T ss_pred EEEeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence 999999999999999999 7999999999998876554322100 0011112222 2 355666
Q ss_pred cCCCCCHHHHHHcCcccee
Q 018632 192 TGAKLNGAEMMACGLATHY 210 (353)
Q Consensus 192 tG~~~~a~eA~~~Glv~~v 210 (353)
.+.-++|+||+++||+|+|
T Consensus 153 ~~~~lta~EA~e~GiiD~V 171 (171)
T cd07017 153 RDRYMSAEEAKEYGLIDKI 171 (171)
T ss_pred CCccccHHHHHHcCCCccC
Confidence 7788999999999999986
No 115
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=98.14 E-value=5.2e-06 Score=72.44 Aligned_cols=134 Identities=16% Similarity=0.151 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHHHhc---CCCcccCCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEc
Q 018632 58 LNTNMGAKLNKLFKAWEN---DPNIGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN 134 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~---d~~v~vg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~ 134 (353)
+|.++...+...|..++. ++.+.+- .=|.|+|+.. ...++..|..++.|+++.+.
T Consensus 25 I~~~~~~~~~~~L~~l~~~~~~~~i~i~---INSpGG~v~~-------------------g~~i~~~i~~~~~~v~t~~~ 82 (182)
T PF00574_consen 25 IDEESANRLISQLLYLENEDKNKPINIY---INSPGGDVDA-------------------GLAIYDAIRSSKAPVTTVVL 82 (182)
T ss_dssp BSHHHHHHHHHHHHHHHHHTSSSEEEEE---EEECEBCHHH-------------------HHHHHHHHHHSSSEEEEEEE
T ss_pred cCHHHHHHHHHHHHHHhccCCCceEEEE---EcCCCCccHH-------------------HHHHHHHHHhcCCCeEEEEe
Confidence 788999999988877742 3334440 0023344432 22356677788999999999
Q ss_pred cccccccccccccCCe--EEEeCceEEeccCCCcccccCccHHHH---------------HhhcChH--H-HHHHHhcCC
Q 018632 135 GVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY---------------LSHLPGH--L-GEFLALTGA 194 (353)
Q Consensus 135 G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~g~~~~---------------l~r~~g~--~-a~~l~ltG~ 194 (353)
|.|.+.|..++++||. |++.+++.|.+.+...+..-....... +....|. . ..+++-...
T Consensus 83 G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~ 162 (182)
T PF00574_consen 83 GLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKEEIEELMDRDT 162 (182)
T ss_dssp EEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHCSSTE
T ss_pred CccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHhCCc
Confidence 9999999999999999 899999999998887665431111111 1111121 1 234444445
Q ss_pred CCCHHHHHHcCccceecCC
Q 018632 195 KLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 195 ~~~a~eA~~~Glv~~vv~~ 213 (353)
-++|+||+++||||+|+.+
T Consensus 163 ~l~a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 163 WLSAEEALEYGIIDEIIES 181 (182)
T ss_dssp EEEHHHHHHHTSSSEEESS
T ss_pred cccHHHHHHcCCCCEeccC
Confidence 5899999999999999854
No 116
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.12 E-value=9.4e-06 Score=71.64 Aligned_cols=131 Identities=16% Similarity=0.138 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHHHhc-C--CCccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 58 LNTNMGAKLNKLFKAWEN-D--PNIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~-d--~~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
++.++...+...|..++. + ..|.+ +.| +++.. ...++..|...+.||++
T Consensus 32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~INSpG------G~v~a-------------------g~aI~d~i~~~~~~V~t 86 (197)
T PRK14512 32 INKDLSELFQEKILLLEALDSKKPIFVYIDSEG------GDIDA-------------------GFAIFNMIRFVKPKVFT 86 (197)
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEECCC------CCHHH-------------------HHHHHHHHHhCCCCEEE
Confidence 667888888888877775 3 33444 433 33321 12355566678999999
Q ss_pred EEccccccccccccccCCe--EEEeCceEEeccCCCcccccCccHH---------------HHHhhcChH--H-HHHHHh
Q 018632 132 ILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGAS---------------FYLSHLPGH--L-GEFLAL 191 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r~~g~--~-a~~l~l 191 (353)
.+.|.|.+.|..++++||- |++.++++|.+....-|+.....-. ..+....|. . ..+++-
T Consensus 87 ~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~ 166 (197)
T PRK14512 87 IGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTD 166 (197)
T ss_pred EEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhh
Confidence 9999999999999999985 8999999987765543321111000 011222232 1 345555
Q ss_pred cCCCCCHHHHHHcCccceecCC
Q 018632 192 TGAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 192 tG~~~~a~eA~~~Glv~~vv~~ 213 (353)
....++|+||+++||+|+|++.
T Consensus 167 ~d~~lta~EA~~yGliD~I~~~ 188 (197)
T PRK14512 167 RDFWLDSSSAVKYGLVFEVVET 188 (197)
T ss_pred cCcccCHHHHHHcCCccEeecC
Confidence 5677999999999999999975
No 117
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.09 E-value=7.6e-05 Score=70.11 Aligned_cols=135 Identities=13% Similarity=0.062 Sum_probs=92.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCC--Cccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 55 LNALNTNMGAKLNKLFKAWENDP--NIGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 55 ~Nal~~~~~~~L~~~l~~~~~d~--~v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
.-+++++-+......++.++.-. -|.+ -.+++++ |.+-.+ ....+.+.+++..+....+|+|+
T Consensus 129 ~G~~~peg~rKa~R~m~lA~~f~lPIVtlvDTpGa~~-G~~aE~-------------~G~~~aia~~l~~~a~~~VP~Is 194 (319)
T PRK05724 129 FGMPRPEGYRKALRLMKMAEKFGLPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLKVPIIC 194 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC-CHHHHh-------------ccHHHHHHHHHHHHhCCCCCEEE
Confidence 45688999999999988887643 3333 3333333 332211 11234556677888899999999
Q ss_pred EEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH-H-HHHHHhcCCCCCHHHHHHcCccce
Q 018632 132 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L-GEFLALTGAKLNGAEMMACGLATH 209 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~-a~~l~ltG~~~~a~eA~~~Glv~~ 209 (353)
.|-|.|.|||......||++++.+++.++ ++++-|.+..+.+-... . +.+ ...+++.++++.|+||.
T Consensus 195 VIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~~a~~aae----~~~ita~~l~~~g~iD~ 263 (319)
T PRK05724 195 TVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDASKAPEAAE----AMKITAQDLKELGIIDE 263 (319)
T ss_pred EEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCchhHHHHHH----HcCCCHHHHHHCCCceE
Confidence 99999988887655679999999888776 44444444455443322 1 333 45689999999999999
Q ss_pred ecCCC
Q 018632 210 YSVSE 214 (353)
Q Consensus 210 vv~~~ 214 (353)
|+|..
T Consensus 264 II~Ep 268 (319)
T PRK05724 264 IIPEP 268 (319)
T ss_pred eccCC
Confidence 99743
No 118
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=98.08 E-value=3.3e-05 Score=68.23 Aligned_cols=132 Identities=12% Similarity=0.090 Sum_probs=91.7
Q ss_pred CCHHHHHHHHHHHHHHhcCC---Cccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 58 LNTNMGAKLNKLFKAWENDP---NIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~---~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
+|.++..++...|-.++.++ .+.+ +.| +|+.. ...++..+...+.||..
T Consensus 39 i~~~~a~~ii~~ll~L~~~~~~~~I~l~INSpG------G~v~~-------------------g~aIyd~m~~~~~~V~T 93 (200)
T CHL00028 39 VDDEIANQLIGLMVYLSIEDDTKDLYLFINSPG------GSVIS-------------------GLAIYDTMQFVKPDVHT 93 (200)
T ss_pred ecHHHHHHHHHHHHHHhccCCCCCEEEEEeCCC------cchhh-------------------HHHHHHHHHhcCCCEEE
Confidence 88999999999998887443 3333 443 22211 12355667778999999
Q ss_pred EEccccccccccccccCC--eEEEeCceEEeccCCCcccccCccH----------------HHHHhhcChHH---HHHHH
Q 018632 132 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGA----------------SFYLSHLPGHL---GEFLA 190 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~g~----------------~~~l~r~~g~~---a~~l~ 190 (353)
.+.|.|.+.|..|++++| .|++.++++|.+.....|..-+... ...+....|.. ..+++
T Consensus 94 v~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~~ 173 (200)
T CHL00028 94 ICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVISEDM 173 (200)
T ss_pred EEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 999999999999999999 6999999999998766552211100 11112222321 34555
Q ss_pred hcCCCCCHHHHHHcCccceecCCC
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSE 214 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~ 214 (353)
-...-++|+||+++||||+|+.+.
T Consensus 174 ~r~~~lta~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 174 ERDVFMSATEAKAYGIVDLVAVNN 197 (200)
T ss_pred hcCccCCHHHHHHcCCCcEEeecC
Confidence 566679999999999999999654
No 119
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.91 E-value=5.1e-05 Score=67.87 Aligned_cols=132 Identities=12% Similarity=0.089 Sum_probs=89.6
Q ss_pred CCCHHHHHHHHHHHHHHhc---CCCccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018632 57 ALNTNMGAKLNKLFKAWEN---DPNIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 130 (353)
Q Consensus 57 al~~~~~~~L~~~l~~~~~---d~~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvI 130 (353)
.+|..+.+.+...|..++. +..+.+ +.|+...+| ..++..+...+-||.
T Consensus 62 ~Idd~~a~~i~aqLl~L~~~~~~~~I~lyINSpGGsv~aG-------------------------laIyd~m~~~~~~V~ 116 (221)
T PRK14514 62 QIDDYTANTIQAQLLYLDSVDPGKDISIYINSPGGSVYAG-------------------------LGIYDTMQFISSDVA 116 (221)
T ss_pred EEcHHHHHHHHHHHHHHhccCCCCCEEEEEECCCcchhhH-------------------------HHHHHHHHhcCCCEE
Confidence 3788888888887766654 334554 444332222 124556677889999
Q ss_pred EEEccccccccccccccCCe--EEEeCceEEeccCCCcccccCccHHH---------------HHhhcChHH---HHHHH
Q 018632 131 AILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGHL---GEFLA 190 (353)
Q Consensus 131 aav~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~~---a~~l~ 190 (353)
..+-|.|.+.|..|++++|. |++.++++|.+....-|......-.. .+....|.. ..+++
T Consensus 117 tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~~ 196 (221)
T PRK14514 117 TICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWADS 196 (221)
T ss_pred EEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 99999999999999999996 89999999998776544321111000 111222321 34555
Q ss_pred hcCCCCCHHHHHHcCccceecCC
Q 018632 191 LTGAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~ 213 (353)
-...-++|+||+++||||+|+..
T Consensus 197 ~rd~wmtA~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 197 DRDYWMTAQEAKEYGMIDEVLIK 219 (221)
T ss_pred hcCccCCHHHHHHcCCccEEeec
Confidence 56667999999999999999864
No 120
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=97.91 E-value=9.5e-05 Score=65.01 Aligned_cols=130 Identities=16% Similarity=0.082 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHHhcCC---Cccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 58 LNTNMGAKLNKLFKAWENDP---NIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~---~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
++.++..++...|..++.++ .+.+ +. |+|+.. ...++..+..++.||..
T Consensus 35 I~~~~~~~ii~~L~~l~~~~~~~~i~l~InSp------GG~v~~-------------------g~~I~d~l~~~~~~v~t 89 (191)
T TIGR00493 35 VNDSVANLIVAQLLFLEAEDPEKDIYLYINSP------GGSITA-------------------GLAIYDTMQFIKPDVST 89 (191)
T ss_pred EChHHHHHHHHHHHHhhccCCCCCEEEEEECC------CCCHHH-------------------HHHHHHHHHhcCCCEEE
Confidence 67778888888888887644 2333 33 333321 12244455666778888
Q ss_pred EEccccccccccccccCC--eEEEeCceEEeccCCCcccccCccHH---------------HHHhhcChH--H-HHHHHh
Q 018632 132 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS---------------FYLSHLPGH--L-GEFLAL 191 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r~~g~--~-a~~l~l 191 (353)
.+.|.|.+.|..+++++| .|++.++++|.+.+..-|......-. ..+....|. . ..+++-
T Consensus 90 ~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~~i~~~~~ 169 (191)
T TIGR00493 90 ICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLEQIEKDTE 169 (191)
T ss_pred EEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhh
Confidence 888999999988888655 69999999999977653332111111 112233343 2 456667
Q ss_pred cCCCCCHHHHHHcCccceecC
Q 018632 192 TGAKLNGAEMMACGLATHYSV 212 (353)
Q Consensus 192 tG~~~~a~eA~~~Glv~~vv~ 212 (353)
.+.-++|+||+++||+|+|+.
T Consensus 170 ~~~~lta~EA~~~GliD~ii~ 190 (191)
T TIGR00493 170 RDFFMSAEEAKEYGLIDSVLT 190 (191)
T ss_pred CCccCcHHHHHHcCCccEEec
Confidence 778899999999999999975
No 121
>PRK10949 protease 4; Provisional
Probab=97.89 E-value=7.6e-05 Score=76.71 Aligned_cols=150 Identities=16% Similarity=0.164 Sum_probs=92.8
Q ss_pred eCCEEEEEEcC-----CCCCCCCCHHHHHHHHHHHHHHhcCCCccc------CCCCCcccCcchhhHHHhhhcCChHHHH
Q 018632 41 KANSRMAILNR-----PSALNALNTNMGAKLNKLFKAWENDPNIGF------GSGRAFCAGGDIVSLYHFMNQGKLEECK 109 (353)
Q Consensus 41 ~~~v~~I~lnr-----p~~~Nal~~~~~~~L~~~l~~~~~d~~v~v------g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 109 (353)
.+.|++|.++- +...+.++. +.+.+.|+.+..|++|++ +.|+. . ..
T Consensus 325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrInSpGGs------~------------~a-- 381 (618)
T PRK10949 325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVNSPGGS------V------------TA-- 381 (618)
T ss_pred CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEecCCCCc------H------------HH--
Confidence 46688887752 222233444 467778899999999987 33321 1 00
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCC------------CcccccCccHH--
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAGAS-- 175 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~------------~~G~~p~~g~~-- 175 (353)
.+.+.+.+..+....||||+.+.|.|.-||.-++++||.++|.+.+..+--.+ ++|+-+....+
T Consensus 382 --se~i~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~ 459 (618)
T PRK10949 382 --SEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSP 459 (618)
T ss_pred --HHHHHHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccc
Confidence 12222333444567899999999999999999999999999999665443221 13332211100
Q ss_pred ---------------HHHhhc-----------------ChHHHHHHHhcCCCCCHHHHHHcCccceecCCCC
Q 018632 176 ---------------FYLSHL-----------------PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEK 215 (353)
Q Consensus 176 ---------------~~l~r~-----------------~g~~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~ 215 (353)
..+... +...-.+-+..|+.+++++|++.||||++-.-++
T Consensus 460 ~~~~~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG~~~~ 531 (618)
T PRK10949 460 LADVSITKALPPEFQQMMQLSIENGYKRFITLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDD 531 (618)
T ss_pred cCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCCCHHH
Confidence 001111 1111123356899999999999999999975433
No 122
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.88 E-value=0.00011 Score=64.96 Aligned_cols=132 Identities=14% Similarity=0.123 Sum_probs=92.2
Q ss_pred CCCHHHHHHHHHHHHHHhcC---CCccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018632 57 ALNTNMGAKLNKLFKAWEND---PNIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 130 (353)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d---~~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvI 130 (353)
.++.++-+.+...|-.++.+ ..+.+ +.| +|+.. ...++..|...+-||.
T Consensus 35 ~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~INSpG------G~v~~-------------------GlaIyd~m~~~~~~V~ 89 (201)
T PRK14513 35 PIESQMANTIVAQLLLLDSQNPEQEIQMYINCPG------GEVYA-------------------GLAIYDTMRYIKAPVS 89 (201)
T ss_pred EEcHHHHHHHHHHHHHhhccCCCCCEEEEEECCC------Cchhh-------------------HHHHHHHHHhcCCCEE
Confidence 48888988888888777753 24554 444 33321 1235566777889999
Q ss_pred EEEccccccccccccccCCe--EEEeCceEEeccCCCcccccCccHHHH-----------------HhhcChHH---HHH
Q 018632 131 AILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY-----------------LSHLPGHL---GEF 188 (353)
Q Consensus 131 aav~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~g~~~~-----------------l~r~~g~~---a~~ 188 (353)
..+.|.|.+.|..|++++|- |++.+++++-+.....|.. +-...+ +.+..|.. -.+
T Consensus 90 Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~~ 167 (201)
T PRK14513 90 TICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLLR 167 (201)
T ss_pred EEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 99999999999999999996 9999999999987765531 111111 12222321 344
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCC
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVSEK 215 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~~~ 215 (353)
++-...-++|+||+++||||+|+++..
T Consensus 168 ~~~rd~~msa~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 168 DMERDYFMSPEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred HhccCcccCHHHHHHcCCCcEEeccCC
Confidence 455556699999999999999997654
No 123
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=97.82 E-value=0.0021 Score=58.34 Aligned_cols=152 Identities=13% Similarity=0.014 Sum_probs=90.0
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHH-hcCCCccc----CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHH
Q 018632 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAW-ENDPNIGF----GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 115 (353)
Q Consensus 41 ~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~-~~d~~v~v----g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 115 (353)
+|.-..|.=|.|.. .++.+-...+...+... +.+..+-+ -.+ .|-.|.. ++.....+.+
T Consensus 30 ~G~~V~vIa~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDtp-G~~~g~~-------------aE~~G~~~a~ 93 (238)
T TIGR03134 30 AGGKVTVIGVVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDTP-SQAYGRR-------------EELLGINQAL 93 (238)
T ss_pred CCEEEEEEEECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeCC-CCCCCHH-------------HHHHHHHHHH
Confidence 34444444566643 78877777777777774 44444332 222 1222221 2222233344
Q ss_pred HHHHHHHh---hCCCcEEEEEcccccccccc-ccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHHHHh
Q 018632 116 YSFIYLLG---THLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL 191 (353)
Q Consensus 116 ~~l~~~l~---~~~kpvIaav~G~a~GgG~~-lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~l 191 (353)
.++...+. ..+.|+|+.|-|.++|||+. +.+.+|.++|.+++.+ +..++-+++..+.+-... ..++.-
T Consensus 94 A~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A~i-------~vm~~e~aa~I~~~~~~~-~~e~a~ 165 (238)
T TIGR03134 94 AHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGAMV-------HVMDLESMARVTKRSVEE-LEALAK 165 (238)
T ss_pred HHHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCcEE-------EecCHHHHHHHHccCHhH-HHHHHH
Confidence 44445554 45699999999999998765 5556888877766554 555555555555444432 222221
Q ss_pred c--CCCCCHHHHHHcCccceecCCCCh
Q 018632 192 T--GAKLNGAEMMACGLATHYSVSEKL 216 (353)
Q Consensus 192 t--G~~~~a~eA~~~Glv~~vv~~~~l 216 (353)
+ -...+++.+.++|+||.|+++.+-
T Consensus 166 ~~~~~a~~~~~~~~~G~vd~vi~~~~~ 192 (238)
T TIGR03134 166 SSPVFAPGIENFVKLGGVHALLDVADA 192 (238)
T ss_pred hhhhhccCHHHHHhCCCccEEeCCCCc
Confidence 1 134677889999999999987654
No 124
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.70 E-value=0.00033 Score=61.71 Aligned_cols=133 Identities=14% Similarity=0.077 Sum_probs=90.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCC---Cccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018632 57 ALNTNMGAKLNKLFKAWENDP---NIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 130 (353)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~---~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvI 130 (353)
.+|.++..++...|..++.++ .+.+ +.|+..-+| ..++..+...+.||.
T Consensus 33 ~i~~~~a~~ii~~Ll~l~~~~~~~~I~l~INSpGG~v~~g-------------------------~aIyd~m~~~~~~V~ 87 (196)
T PRK12551 33 PVTSDSANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDG-------------------------LGIFDTMQHVKPDVH 87 (196)
T ss_pred eecHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCcchhhH-------------------------HHHHHHHHhcCCCEE
Confidence 388999999999998887533 3444 444222222 235556667888999
Q ss_pred EEEccccccccccccccCCe--EEEeCceEEeccCCCcccccCccHHH---------------HHhhcChHH---HHHHH
Q 018632 131 AILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGHL---GEFLA 190 (353)
Q Consensus 131 aav~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~~---a~~l~ 190 (353)
..+.|.|.+.|..|++++|- |++.+++++.+....-|..-...-.. .+....|.. ..+++
T Consensus 88 t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~ 167 (196)
T PRK12551 88 TVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDT 167 (196)
T ss_pred EEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 99999999999999999985 88999999998776433211110000 111222321 34455
Q ss_pred hcCCCCCHHHHHHcCccceecCCC
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSE 214 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~ 214 (353)
-...-++|+||+++||+|+|++..
T Consensus 168 ~rd~~msa~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 168 DRDFFMSPSEAVEYGLIDLVIDKR 191 (196)
T ss_pred hcCcCCCHHHHHHcCCCcEEeccC
Confidence 555669999999999999999764
No 125
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.66 E-value=0.00094 Score=61.66 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=91.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcC-------CCccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWEND-------PNIGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 115 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d-------~~v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 115 (353)
|+++-.+..-..-++....-..+..+++.+.+| |-|.+ - |+|+.+.+-. .....+.+ .
T Consensus 61 v~v~a~D~t~~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~d-----SgGaRlqEg~--------~~L~~~a~-i 126 (274)
T TIGR03133 61 VVVAAQEGRFQGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLD-----TGGVRLQEAN--------AGLIAIAE-I 126 (274)
T ss_pred EEEEEECCCccCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEc-----CCCcChhhhH--------HHHHHHHH-H
Confidence 555555555566788888889999999988762 22322 2 2233332211 11111111 1
Q ss_pred HHHHHHHhhCCCcEEEEEccc--cccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH--H-HHHHH
Q 018632 116 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLA 190 (353)
Q Consensus 116 ~~l~~~l~~~~kpvIaav~G~--a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~--~-a~~l~ 190 (353)
...+..+... +|+|+.+-|+ |+||+..++..||++|+++++++++. +...+....|. . ..+--
T Consensus 127 ~~~~~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~a-----------GP~VIe~~~G~e~~~~~d~~ 194 (274)
T TIGR03133 127 MRAILDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA 194 (274)
T ss_pred HHHHHHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEecc-----------CHHHHHHhcCCCccCHHHhc
Confidence 2222333344 9999999999 89999999999999999999887763 12223333442 1 44444
Q ss_pred hcCCCCCHHHHHHcCccceecCCCC
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSEK 215 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~~ 215 (353)
|..+.+.+......|++|.+++++.
T Consensus 195 l~~~~lGG~~~~~sG~~D~~v~dd~ 219 (274)
T TIGR03133 195 LVWRTTGGKHRFLSGDADVLVEDDV 219 (274)
T ss_pred ccccccchHhHhhcccceEEeCCHH
Confidence 4555666677888999999998754
No 126
>PRK11778 putative inner membrane peptidase; Provisional
Probab=97.53 E-value=0.00038 Score=65.92 Aligned_cols=151 Identities=12% Similarity=0.073 Sum_probs=90.3
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc---CCCC-CcccCcchhhHHHhhhcCChHHHHHHHHHHH
Q 018632 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF---GSGR-AFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 116 (353)
Q Consensus 41 ~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v---g~g~-~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 116 (353)
.+.|++|.|+.+=..+ -...+..++...+..+..++.|.+ +.|+ ...+|. ..
T Consensus 89 ~~~v~VI~~~G~I~~~-~~~~l~e~i~a~l~~A~~~~aVvLridSpGG~v~~s~~-----------------------a~ 144 (330)
T PRK11778 89 KPRLFVLDFKGDIDAS-EVESLREEITAILAVAKPGDEVLLRLESPGGVVHGYGL-----------------------AA 144 (330)
T ss_pred CCeEEEEEEEEEECCC-cchhhHHHHHHHHHhccCCCeEEEEEeCCCCchhHHHH-----------------------HH
Confidence 4678888887542111 112344666666666665554444 3332 121110 00
Q ss_pred HHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccH----------------------
Q 018632 117 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA---------------------- 174 (353)
Q Consensus 117 ~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~---------------------- 174 (353)
..+.++....||+|+.+++.|.-||..++++||-+++.+.+.++.-.+... .|....
T Consensus 145 ~~l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~-~~~~~~lLeKlGI~~evi~aG~yK~a~~ 223 (330)
T PRK11778 145 SQLQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQ-IPNFHRLLKKHDIDVELHTAGEYKRTLT 223 (330)
T ss_pred HHHHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeee-ccCHHHHHHHCCCceEEEEecCccCCCC
Confidence 113345567899999999999999999999999999999888775433211 111100
Q ss_pred -----H----HHHhhcCh-------------H--HHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 018632 175 -----S----FYLSHLPG-------------H--LGEFLALTGAKLNGAEMMACGLATHYSVSEKL 216 (353)
Q Consensus 175 -----~----~~l~r~~g-------------~--~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l 216 (353)
+ ..+...+. + .-.+-+.+|+.+++++|++.||||++...+++
T Consensus 224 pf~~~see~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~ 289 (330)
T PRK11778 224 LFGENTEEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDY 289 (330)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHH
Confidence 0 00111111 0 11234568999999999999999999876554
No 127
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=97.50 E-value=0.0016 Score=59.37 Aligned_cols=112 Identities=14% Similarity=0.147 Sum_probs=81.5
Q ss_pred EEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcccCCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHH
Q 018632 38 VEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYS 117 (353)
Q Consensus 38 ~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~vg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 117 (353)
+++++.+..+.+ |- .+-++.+...++.++++....+..+-+= .-+-|+++. ...+
T Consensus 55 Ihrqe~~~~~gi--Pi-~~~I~i~dse~v~raI~~~~~~~~IdLi---i~TpGG~v~-------------------AA~~ 109 (285)
T PF01972_consen 55 IHRQERVSFLGI--PI-YRYIDIDDSEFVLRAIREAPKDKPIDLI---IHTPGGLVD-------------------AAEQ 109 (285)
T ss_pred EEeccccceecc--cc-ceeEcHhhHHHHHHHHHhcCCCCceEEE---EECCCCcHH-------------------HHHH
Confidence 334444444444 42 3668889999999999888776655440 001222221 1223
Q ss_pred HHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccH
Q 018632 118 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA 174 (353)
Q Consensus 118 l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~ 174 (353)
+...+..++.|+++.|...|+-+|..+|++||-+++.+.+.+|.-+.++|-.|..+.
T Consensus 110 I~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~si 166 (285)
T PF01972_consen 110 IARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAASI 166 (285)
T ss_pred HHHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHHH
Confidence 556677899999999999999999999999999999999999999999998886543
No 128
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.46 E-value=0.0012 Score=61.64 Aligned_cols=146 Identities=14% Similarity=0.113 Sum_probs=86.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC-----C--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDP-----N--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 115 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~-----~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 115 (353)
|+++-.+..-..-++.......+..+++.+.++. - |.+ -. +|+.+.+-. .....+.+ .
T Consensus 70 v~v~a~D~tf~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dS-----GGaRlqEg~--------~~L~~~a~-i 135 (301)
T PRK07189 70 VVVAAQEGRFMGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFET-----GGVRLQEAN--------AGLAAIAE-I 135 (301)
T ss_pred EEEEEECCCccCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecC-----CCcCccchH--------HHHHHHHH-H
Confidence 5555556555678899999999999999987655 2 222 21 223332110 01111111 1
Q ss_pred HHHHHHHhhCCCcEEEEEccc--cccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChH--H-HHHHH
Q 018632 116 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLA 190 (353)
Q Consensus 116 ~~l~~~l~~~~kpvIaav~G~--a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~--~-a~~l~ 190 (353)
...+..+... +|+|+.+-|+ |+||+...+.+||++|+++++++++. +...+....|. - ..+.-
T Consensus 136 ~~~~~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla-----------GP~VIe~~~G~e~~d~~d~~ 203 (301)
T PRK07189 136 MRAIVDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA 203 (301)
T ss_pred HHHHHHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc-----------CHHHHHHhcCCcccCHHHhc
Confidence 2222333344 9999999999 99999999999999999999887763 12222222331 1 33323
Q ss_pred hcCCCCCHHHHHHcCccceecCCCC
Q 018632 191 LTGAKLNGAEMMACGLATHYSVSEK 215 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~vv~~~~ 215 (353)
+..+.+.+......|.+|.+++++.
T Consensus 204 ~vw~~lGG~h~~~sG~~D~~v~dd~ 228 (301)
T PRK07189 204 LVWRTTGGKHRYLSGLADALVDDDV 228 (301)
T ss_pred ccccccCcceeeecccceEEeCCHH
Confidence 3222222334456899999998754
No 129
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=97.37 E-value=0.0023 Score=57.27 Aligned_cols=139 Identities=19% Similarity=0.108 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCC---Cccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018632 57 ALNTNMGAKLNKLFKAWENDP---NIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 130 (353)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~---~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvI 130 (353)
..+.++.+.+...|-.++.++ .|.+ +.|+...+|-=+... .....++..+...+-||.
T Consensus 48 ~~~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpGGsv~~G~~iG~v----------------~~glaIyD~m~~ik~~V~ 111 (222)
T PRK12552 48 QVGMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGFE----------------TEAFAICDTMRYIKPPVH 111 (222)
T ss_pred chhHhHHHHHHHHHHHHhccCCCCCEEEEEeCCCCCcccccccccc----------------ccHHHHHHHHHhcCCCeE
Confidence 344558888888877776543 4555 666555555111100 111235566667788999
Q ss_pred EEEccccccccccccccCCe--EEEeCceEEeccCCCcccccCccHHHH-----------------HhhcChHH---HHH
Q 018632 131 AILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY-----------------LSHLPGHL---GEF 188 (353)
Q Consensus 131 aav~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~g~~~~-----------------l~r~~g~~---a~~ 188 (353)
..+-|.|.+.|..|++++|- |++.+++++-+.....|.. +-.+-+ +....|.. -.+
T Consensus 112 Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~--G~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~~ 189 (222)
T PRK12552 112 TICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR--GQATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLSK 189 (222)
T ss_pred EEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc--cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999999999999995 8999999999877654432 111111 11111211 122
Q ss_pred HHhcCCCCCHHHHHHcCccceecCC
Q 018632 189 LALTGAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 189 l~ltG~~~~a~eA~~~Glv~~vv~~ 213 (353)
++-...-++|+||+++||||+|+.+
T Consensus 190 d~~rd~wmsA~EA~eyGliD~Ii~~ 214 (222)
T PRK12552 190 DTDRMFYLTPQEAKEYGLIDRVLES 214 (222)
T ss_pred HhcCCCcCCHHHHHHcCCCcEEecc
Confidence 3333345999999999999999965
No 130
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=97.32 E-value=0.0049 Score=57.62 Aligned_cols=147 Identities=14% Similarity=0.148 Sum_probs=89.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCC--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 120 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (353)
|+++-.+-.-..-+++....+.+..+++.+....- |.+ ..| |+.+.+ + ......+ ......+.
T Consensus 123 V~v~a~D~~f~gGS~g~~~~eKi~r~~e~A~~~~lPlV~l~dsg-----GarmqE-------g-i~sL~~~-ak~~~a~~ 188 (292)
T PRK05654 123 VVLAVMDFSFMGGSMGSVVGEKIVRAVERAIEEKCPLVIFSASG-----GARMQE-------G-LLSLMQM-AKTSAALK 188 (292)
T ss_pred EEEEEEecccccCCccHHHHHHHHHHHHHHHHcCCCEEEEEcCC-----Ccchhh-------h-hhHHHhH-HHHHHHHH
Confidence 34333443336788999999999999999877633 333 222 222211 1 0111111 22223344
Q ss_pred HHhhCCCcEEEEEcccccccccc-ccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHHHHhcCCCCCHH
Q 018632 121 LLGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA 199 (353)
Q Consensus 121 ~l~~~~kpvIaav~G~a~GgG~~-lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~ 199 (353)
++....+|.|+.+-|+|+||+.. .++.+|++|+.++|.+++-.. ..+...+|. ++ .-+.-+++
T Consensus 189 ~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGp-----------rvie~~~~e---~l--pe~~~~ae 252 (292)
T PRK05654 189 RLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGP-----------RVIEQTVRE---KL--PEGFQRAE 252 (292)
T ss_pred HHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCH-----------HHHHhhhhh---hh--hhhhcCHH
Confidence 45567899999999999999655 577899999999887776322 111111221 11 11223567
Q ss_pred HHHHcCccceecCCCChhHHH
Q 018632 200 EMMACGLATHYSVSEKLPLIE 220 (353)
Q Consensus 200 eA~~~Glv~~vv~~~~l~~~~ 220 (353)
-+.+.|+||.|+++.++....
T Consensus 253 ~~~~~G~vD~Vv~~~e~r~~l 273 (292)
T PRK05654 253 FLLEHGAIDMIVHRRELRDTL 273 (292)
T ss_pred HHHhCCCCcEEECHHHHHHHH
Confidence 778999999999998876533
No 131
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.23 E-value=0.0072 Score=56.31 Aligned_cols=147 Identities=13% Similarity=0.131 Sum_probs=90.9
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCC--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 120 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (353)
|+++..|-.-..-+++....+.+..+++.+.+..- |.+ ..|+ +-+.+ + ......+ ......+.
T Consensus 122 V~v~a~D~~f~gGSmg~~~geKi~r~~e~A~~~~lPlV~l~dSgG-----aRmqE-------g-~~sL~~~-ak~~~~~~ 187 (285)
T TIGR00515 122 IVVAVFDFAFMGGSMGSVVGEKFVRAIEKALEDNCPLIIFSASGG-----ARMQE-------A-LLSLMQM-AKTSAALA 187 (285)
T ss_pred EEEEEEeccccCCCccHHHHHHHHHHHHHHHHcCCCEEEEEcCCC-----ccccc-------c-hhHHHhH-HHHHHHHH
Confidence 44444554446788999999999999999876533 333 2222 21111 1 1111111 12222334
Q ss_pred HHhhCCCcEEEEEcccccccccc-ccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHHHHhcCCCCCHH
Q 018632 121 LLGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA 199 (353)
Q Consensus 121 ~l~~~~kpvIaav~G~a~GgG~~-lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~ 199 (353)
++....+|.|+.+-|+|+||+.. .++.+|++|+.++|.+++-... .+...+|.. +.-+.-+|+
T Consensus 188 ~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e~-----lpe~~q~ae 251 (285)
T TIGR00515 188 KMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVREK-----LPEGFQTSE 251 (285)
T ss_pred HHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcCc-----cchhcCCHH
Confidence 45667899999999999999655 5679999999999888774221 112222211 111233566
Q ss_pred HHHHcCccceecCCCChhHHH
Q 018632 200 EMMACGLATHYSVSEKLPLIE 220 (353)
Q Consensus 200 eA~~~Glv~~vv~~~~l~~~~ 220 (353)
-+.+.|+||.|+++.++....
T Consensus 252 ~~~~~G~vD~iv~~~~~r~~l 272 (285)
T TIGR00515 252 FLLEHGAIDMIVHRPEMKKTL 272 (285)
T ss_pred HHHhCCCCcEEECcHHHHHHH
Confidence 688999999999998876533
No 132
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=97.19 E-value=0.0025 Score=61.89 Aligned_cols=145 Identities=10% Similarity=0.128 Sum_probs=105.1
Q ss_pred EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC-Cccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHH
Q 018632 40 GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDP-NIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 115 (353)
Q Consensus 40 ~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~-~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 115 (353)
-++.|.+|.++. .+++.+.+.+.+.++.++++. +..+ -.++. +.+.+
T Consensus 24 ~~~~v~vi~i~g-----~I~~~s~~~l~r~l~~A~~~~a~~vvl~ldTPGG------------------------l~~sm 74 (436)
T COG1030 24 AEKKVYVIEIDG-----AIDPASADYLQRALQSAEEENAAAVVLELDTPGG------------------------LLDSM 74 (436)
T ss_pred cCCeEEEEEecC-----ccCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCc------------------------hHHHH
Confidence 345677777754 599999999999999999876 3333 22211 23556
Q ss_pred HHHHHHHhhCCCcEEEEEc---cccccccccccccCCeEEEeCceEEeccCCCccc---ccCcc-HHHH------HhhcC
Q 018632 116 YSFIYLLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF---HPDAG-ASFY------LSHLP 182 (353)
Q Consensus 116 ~~l~~~l~~~~kpvIaav~---G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~---~p~~g-~~~~------l~r~~ 182 (353)
.++..++.+.+.|||..|. +.|.-+|.-++++||+..+.+.+.++--..-.+- .+... .... +.+.-
T Consensus 75 ~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~ 154 (436)
T COG1030 75 RQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEER 154 (436)
T ss_pred HHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHc
Confidence 6788899999999999884 4699999999999999999999998875544322 11111 1122 22233
Q ss_pred hH--H-HHHHHhcCCCCCHHHHHHcCccceecCC
Q 018632 183 GH--L-GEFLALTGAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 183 g~--~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~ 213 (353)
|+ . |.+++.....++++||++.|++|-+..+
T Consensus 155 gRN~~~ae~~v~~~~~l~a~eA~~~~vid~iA~~ 188 (436)
T COG1030 155 GRNPTWAERFVTENLSLTAEEALRQGVIDLIARD 188 (436)
T ss_pred CCChHHHHHHhhhccCCChhHHHhcCccccccCC
Confidence 43 2 7889999999999999999999988754
No 133
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.16 E-value=0.0024 Score=60.72 Aligned_cols=77 Identities=18% Similarity=0.276 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhcCCCccc------CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 018632 63 GAKLNKLFKAWENDPNIGF------GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 136 (353)
Q Consensus 63 ~~~L~~~l~~~~~d~~v~v------g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~ 136 (353)
.+.+.+.|+.+..|+.++. +.|+.-.+ ...+.+.+..+..-. ||++.|++.
T Consensus 82 ~~~~~~~l~~~~~~~~vk~vvL~inSPGG~v~a----------------------s~~i~~~l~~l~~~~-PV~v~v~~~ 138 (317)
T COG0616 82 GDDIEEILRAARADPSVKAVVLRINSPGGSVVA----------------------SELIARALKRLRAKK-PVVVSVGGY 138 (317)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEEECcCCchhH----------------------HHHHHHHHHHHhhcC-CEEEEECCe
Confidence 4556666777778887775 33321111 122233344444444 999999999
Q ss_pred cccccccccccCCeEEEeCceEEecc
Q 018632 137 TMGGGAGVSIPGTFRVACGKTVFATP 162 (353)
Q Consensus 137 a~GgG~~lal~cD~ria~~~a~f~~p 162 (353)
|.-||..++++||.+||++.+..|--
T Consensus 139 AASGGY~IA~aAd~I~a~p~si~GSI 164 (317)
T COG0616 139 AASGGYYIALAADKIVADPSSITGSI 164 (317)
T ss_pred ecchhhhhhccCCEEEecCCceeeec
Confidence 99999999999999999998887753
No 134
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=96.98 E-value=0.00057 Score=57.93 Aligned_cols=95 Identities=18% Similarity=0.135 Sum_probs=59.2
Q ss_pred hhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCC------------cccc---------cCcc-----HH-
Q 018632 123 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFH---------PDAG-----AS- 175 (353)
Q Consensus 123 ~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~------------~G~~---------p~~g-----~~- 175 (353)
....|||||.++|.+..+|.-|+++||-+++.+.+.++...+. +|+- -..+ .+
T Consensus 3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~ 82 (154)
T PF01343_consen 3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE 82 (154)
T ss_dssp HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence 4678999999999999999999999999999998887764332 2221 1111 00
Q ss_pred ---HHHhhcC-------------hH----HHHHHHhcCCCCCHHHHHHcCccceecCCCChh
Q 018632 176 ---FYLSHLP-------------GH----LGEFLALTGAKLNGAEMMACGLATHYSVSEKLP 217 (353)
Q Consensus 176 ---~~l~r~~-------------g~----~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~ 217 (353)
..+.+.+ ++ ...+-+..|..+++++|++.||||++-..+++.
T Consensus 83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~~~~~~ 144 (154)
T PF01343_consen 83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGTFDEAI 144 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCCHHHHH
Confidence 1111111 11 112235788999999999999999998655543
No 135
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=96.97 E-value=0.017 Score=53.79 Aligned_cols=149 Identities=13% Similarity=0.131 Sum_probs=88.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcC--CCccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWEND--PNIGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 120 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d--~~v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (353)
|+++-++-.-..-++....-+.+..+++.+.+. |-|.+ .+ +|+-+.+ +- .....+.+....+..
T Consensus 135 v~v~a~Dftf~gGSmG~v~geKi~ra~e~A~~~rlPlV~l~~S-----GGARmQE-------g~-~sL~qmak~saa~~~ 201 (296)
T CHL00174 135 VALGVMDFQFMGGSMGSVVGEKITRLIEYATNESLPLIIVCAS-----GGARMQE-------GS-LSLMQMAKISSALYD 201 (296)
T ss_pred EEEEEECCcccccCcCHHHHHHHHHHHHHHHHcCCCEEEEECC-----CCccccc-------cc-hhhhhhHHHHHHHHH
Confidence 555555555567889999999999999988765 33333 22 2233321 11 111111111111111
Q ss_pred HHhhCCCcEEEEEccccccccccc-cccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHHHHhcCCCCCHH
Q 018632 121 LLGTHLKPHVAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA 199 (353)
Q Consensus 121 ~l~~~~kpvIaav~G~a~GgG~~l-al~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~ 199 (353)
....-.+|.|+.+.|+|.||+... ++.||++|+.+++.+++... ..+...+|.. +.-.-=+|+
T Consensus 202 ~~~~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGP-----------rVIe~t~ge~-----lpe~fq~ae 265 (296)
T CHL00174 202 YQSNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGK-----------RVIEQTLNKT-----VPEGSQAAE 265 (296)
T ss_pred HHHcCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCH-----------HHHHHhcCCc-----CCcccccHH
Confidence 122457999999999999998765 67799999988887776421 1111111210 111123567
Q ss_pred HHHHcCccceecCCCChhHHHH
Q 018632 200 EMMACGLATHYSVSEKLPLIEE 221 (353)
Q Consensus 200 eA~~~Glv~~vv~~~~l~~~~~ 221 (353)
-.++.|+||.||+..++.....
T Consensus 266 ~l~~~G~vD~iV~r~~lr~~l~ 287 (296)
T CHL00174 266 YLFDKGLFDLIVPRNLLKGVLS 287 (296)
T ss_pred HHHhCcCceEEEcHHHHHHHHH
Confidence 7889999999999888765433
No 136
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=96.92 E-value=0.021 Score=57.80 Aligned_cols=149 Identities=15% Similarity=0.096 Sum_probs=92.8
Q ss_pred EcCCC-CCCCCCHHHHHHHHHHHHHHhcCCC--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhh
Q 018632 49 LNRPS-ALNALNTNMGAKLNKLFKAWENDPN--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGT 124 (353)
Q Consensus 49 lnrp~-~~Nal~~~~~~~L~~~l~~~~~d~~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 124 (353)
=|+|. ..-+++++......+.++.+++..- |.+ -.++ |..|.+-. .....+...+++.++..
T Consensus 321 And~~~~~G~~~~~~~~K~~r~i~~a~~~~lPlV~lvDs~G-~~~g~~~E-------------~~g~~~~~a~~~~a~~~ 386 (512)
T TIGR01117 321 ANQPKVMAGCLDIDSSDKIARFIRFCDAFNIPIVTFVDVPG-FLPGVNQE-------------YGGIIRHGAKVLYAYSE 386 (512)
T ss_pred EeccccccCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCcC-ccccHHHH-------------HHHHHHHHHHHHHHHHh
Confidence 34443 3456999999999999998876433 333 2222 54443321 12233455567788888
Q ss_pred CCCcEEEEEccccccccccccc----cCCeEEEeCceEEeccCCCcccccCccHHHHHhh-cCh----HH-HHHHH---h
Q 018632 125 HLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPG----HL-GEFLA---L 191 (353)
Q Consensus 125 ~~kpvIaav~G~a~GgG~~lal----~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~g----~~-a~~l~---l 191 (353)
..+|.|+.|-|.++|||..-.+ .+|++++.+++.++. .++-++...+.+ .+. .. +..-. .
T Consensus 387 ~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~v-------~~pe~a~~i~~~~~l~~~~~~~~~~~~~~~~~ 459 (512)
T TIGR01117 387 ATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIAV-------MGPAGAANIIFRKDIKEAKDPAATRKQKIAEY 459 (512)
T ss_pred CCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEee-------cCHHHHHHHHhhhhcccccCHHHHHHHHHHHH
Confidence 9999999999999988654333 389988888776654 333333333322 111 01 11111 1
Q ss_pred cCCCCCHHHHHHcCccceecCCCChhH
Q 018632 192 TGAKLNGAEMMACGLATHYSVSEKLPL 218 (353)
Q Consensus 192 tG~~~~a~eA~~~Glv~~vv~~~~l~~ 218 (353)
.-+..++..+.+.|+||.|+++.+...
T Consensus 460 ~~~~~~~~~~a~~g~vD~VI~P~~tR~ 486 (512)
T TIGR01117 460 REEFANPYKAAARGYVDDVIEPKQTRP 486 (512)
T ss_pred HHhhcCHHHHHhcCCCCeeEChHHHHH
Confidence 123457889999999999999988764
No 137
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.89 E-value=0.0071 Score=53.01 Aligned_cols=96 Identities=16% Similarity=0.041 Sum_probs=64.7
Q ss_pred HHHHHhhCCCcEEEEEccccccccccccccCCeE--EEeCceEEeccCCCcccccCccHHHH-----------------H
Q 018632 118 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR--VACGKTVFATPETLIGFHPDAGASFY-----------------L 178 (353)
Q Consensus 118 l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~r--ia~~~a~f~~pe~~~G~~p~~g~~~~-----------------l 178 (353)
++..+...+.||...|-|.|...|..|++++|.. ++.+++++-+....-|+. +. .+-+ +
T Consensus 77 Iydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~gg~~-G~-a~Di~i~A~ei~~~~~~l~~i~ 154 (200)
T COG0740 77 IYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPSGGAQ-GQ-ASDIEIHAREILKIKERLNRIY 154 (200)
T ss_pred HHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCCccCc-cC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667899999999999999999999999986 888888888766653321 11 1111 0
Q ss_pred hhcChHH---HHHHHhcCCCCCHHHHHHcCccceecCCCC
Q 018632 179 SHLPGHL---GEFLALTGAKLNGAEMMACGLATHYSVSEK 215 (353)
Q Consensus 179 ~r~~g~~---a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~ 215 (353)
....|.. -....-...-++|+||+++||+|+|.....
T Consensus 155 a~~TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~ 194 (200)
T COG0740 155 AEHTGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESRE 194 (200)
T ss_pred HHHcCCCHHHHHHhhcccccCCHHHHHHcCCcceeccccc
Confidence 0111111 112222344599999999999999997654
No 138
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=96.79 E-value=0.01 Score=59.96 Aligned_cols=143 Identities=13% Similarity=0.098 Sum_probs=91.1
Q ss_pred EeCC--EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcccCCCCCcccCc--chhhHHHhhhcCChHHHHHHHHHH
Q 018632 40 GKAN--SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFGSGRAFCAGG--DIVSLYHFMNQGKLEECKDFFRTL 115 (353)
Q Consensus 40 ~~~~--v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~vg~g~~F~aG~--Dl~~~~~~~~~~~~~~~~~~~~~~ 115 (353)
.-+| |.++-.+..-...+++......+..+++.+.++.--.+.- .=|+|+ ++.+-.. ....+.. .
T Consensus 53 ~I~G~~v~v~a~D~t~~gGs~g~~~~~Ki~ra~~~A~~~~~P~v~l--~dsgGa~~r~~eg~~--------~l~~~g~-i 121 (493)
T PF01039_consen 53 KINGRPVVVIAQDFTVLGGSVGEVHGEKIARAIELALENGLPLVYL--VDSGGAFLRMQEGVE--------SLMGMGR-I 121 (493)
T ss_dssp EETTEEEEEEEEETTSGGGTBSHHHHHHHHHHHHHHHHHTEEEEEE--EEESSBCGGGGGHHH--------HHHHHHH-H
T ss_pred eeCCeeEEEEEeccceecCCCCcccceeeehHHHHHHHcCCCcEEe--ccccccccccchhhh--------hhhhhHH-H
Confidence 3444 4444445444678899999999999999887653322200 004444 4433222 1122222 2
Q ss_pred HHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCc-eEEeccCCCcccccCccHHHHHhhcChHHHHHHHhcCC
Q 018632 116 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA 194 (353)
Q Consensus 116 ~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltG~ 194 (353)
..-...+.. ..|+|+++.|+|.|||..++..||++|++++ +.+++. +...+ + ..+|+
T Consensus 122 ~~~~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~-----------GP~vv---------~-~~~Ge 179 (493)
T PF01039_consen 122 FRAIARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA-----------GPRVV---------E-SATGE 179 (493)
T ss_dssp HHHHHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS-----------THHHH---------H-HHHSS
T ss_pred HHHHHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEEec-----------ccccc---------c-cccCc
Confidence 223334455 9999999999999999999999999999997 887754 11111 1 24578
Q ss_pred CCCHHHH-------HHcCccceecCCCC
Q 018632 195 KLNGAEM-------MACGLATHYSVSEK 215 (353)
Q Consensus 195 ~~~a~eA-------~~~Glv~~vv~~~~ 215 (353)
.++.++. ...|.+|.++++++
T Consensus 180 ~~~~~~lgG~~~h~~~sG~~d~v~~de~ 207 (493)
T PF01039_consen 180 EVDSEELGGADVHAAKSGVVDYVVDDEE 207 (493)
T ss_dssp CTSHHHHHBHHHHHHTSSSSSEEESSHH
T ss_pred cccchhhhhhhhhcccCCCceEEEechH
Confidence 8887764 46899999998754
No 139
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=96.47 E-value=0.0028 Score=58.10 Aligned_cols=90 Identities=12% Similarity=0.117 Sum_probs=66.7
Q ss_pred HHHHHHHHHhhCCCcEEEEEccccccccccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHH-HHHHHhc
Q 018632 114 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT 192 (353)
Q Consensus 114 ~~~~l~~~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~lt 192 (353)
.+.+-+..+..+++|+||.|=|---+||.--...+|.+.+-++++|+. +.|.+.++.++..---.. |.+
T Consensus 176 AIA~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILWkD~~ka~eAAe---- 245 (317)
T COG0825 176 AIARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILWKDASKAKEAAE---- 245 (317)
T ss_pred HHHHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhhcChhhhHHHHH----
Confidence 344455667889999999999987777766667789999999999984 456665554433222222 333
Q ss_pred CCCCCHHHHHHcCccceecCC
Q 018632 193 GAKLNGAEMMACGLATHYSVS 213 (353)
Q Consensus 193 G~~~~a~eA~~~Glv~~vv~~ 213 (353)
.-.++|++.+++|+||.|+|.
T Consensus 246 ~mkita~dLk~lgiID~II~E 266 (317)
T COG0825 246 AMKITAHDLKELGIIDGIIPE 266 (317)
T ss_pred HcCCCHHHHHhCCCcceeccC
Confidence 468999999999999999975
No 140
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=96.14 E-value=0.033 Score=57.37 Aligned_cols=84 Identities=12% Similarity=-0.109 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHhcCCCccc--CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccc
Q 018632 61 NMGAKLNKLFKAWENDPNIGF--GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 138 (353)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~v--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~ 138 (353)
-.+.++.+.|+.+..|+.|+. =.-.. +.|+.+..+ +.+.+.+..+....|||||..++.+
T Consensus 76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~-~~g~~~~~~----------------~ei~~ai~~fk~sgKpVvA~~~~~~- 137 (584)
T TIGR00705 76 ISLFDIVNAIRQAADDRRIEGLVFDLSN-FSGWDSPHL----------------VEIGSALSEFKDSGKPVYAYGTNYS- 137 (584)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEccC-CCCCCHHHH----------------HHHHHHHHHHHhcCCeEEEEEcccc-
Confidence 356799999999999999997 00001 113333211 1223344445567899999888775
Q ss_pred cccccccccCCeEEEeCceEEecc
Q 018632 139 GGGAGVSIPGTFRVACGKTVFATP 162 (353)
Q Consensus 139 GgG~~lal~cD~ria~~~a~f~~p 162 (353)
-+|.-|+.+||-+++.+.+.+++.
T Consensus 138 s~~YylAs~AD~I~~~p~G~v~~~ 161 (584)
T TIGR00705 138 QGQYYLASFADEIILNPMGSVDLH 161 (584)
T ss_pred chhhhhhhhCCEEEECCCceEEee
Confidence 578999999999999998877553
No 141
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=95.86 E-value=0.12 Score=52.85 Aligned_cols=140 Identities=14% Similarity=0.115 Sum_probs=82.9
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCC--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 120 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (353)
|+++-.+..-+.-+++......+..+++.+.+..- |.+ -.|++ .+.+ + .........+. .......
T Consensus 131 V~v~a~D~tv~GGs~g~~~~~Ki~r~~elA~~~~lPlV~l~DSgGa-----rl~~--q---~e~~~~~~~~g-~if~~~~ 199 (569)
T PLN02820 131 CMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGA-----NLPR--Q---AEVFPDRDHFG-RIFYNQA 199 (569)
T ss_pred EEEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCc-----CCcc--c---ccccchHhHHH-HHHHHHH
Confidence 44444444446789999999999999999876543 333 22222 2211 0 00000000111 1111222
Q ss_pred HHhhCCCcEEEEEccccccccccccccCCeEEEeC-ceEEeccCCCcccccCccHHHHHhhcChHHHHHHHhcCCCCCHH
Q 018632 121 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA 199 (353)
Q Consensus 121 ~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~ 199 (353)
.+....+|.|+++-|+|.|||.....+||++|+++ ++.+++. +...+ + ..+|+.++++
T Consensus 200 ~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~a-----------GP~vV---------~-~~~Ge~v~~e 258 (569)
T PLN02820 200 RMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLA-----------GPPLV---------K-AATGEEVSAE 258 (569)
T ss_pred HHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEec-----------CHHHH---------H-hhcCcccCHH
Confidence 34556799999999999999999999999999987 4555542 11111 1 2356667766
Q ss_pred HHH-------HcCccceecCCCC
Q 018632 200 EMM-------ACGLATHYSVSEK 215 (353)
Q Consensus 200 eA~-------~~Glv~~vv~~~~ 215 (353)
|.- .-|.+|.+++++.
T Consensus 259 eLGGa~~h~~~sGv~d~~~~de~ 281 (569)
T PLN02820 259 DLGGADVHCKVSGVSDHFAQDEL 281 (569)
T ss_pred HhCCHHHhcccccccccccCchH
Confidence 652 4688888877653
No 142
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=95.53 E-value=0.087 Score=53.36 Aligned_cols=135 Identities=14% Similarity=0.199 Sum_probs=80.4
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCC--ccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--IGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 120 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~--v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (353)
|+++-.+-.-+.-+++......+..+++.+.++.- |.+ -+ +|+.+.+-. .....+.+.+...
T Consensus 84 v~v~a~D~t~~gGS~g~~~~~K~~r~~e~A~~~~lPlV~l~dS-----gGarm~eg~--------~~l~~~~~~~~~~-- 148 (512)
T TIGR01117 84 VYAFAQDFTVMGGSLGEMHAAKIVKIMDLAMKMGAPVVGLNDS-----GGARIQEAV--------DALKGYGDIFYRN-- 148 (512)
T ss_pred EEEEEECCcccccCCCHHHHHHHHHHHHHHHHcCCCEEEEecC-----CCCCccccc--------hhhhhHHHHHHHH--
Confidence 44444444446778999999999999998876543 332 21 222221100 0001111111111
Q ss_pred HHhhCCCcEEEEEccccccccccccccCCeEEEeCc-eEEeccCCCcccccCccHHHHHhhcChHHHHHHHhcCCCCCHH
Q 018632 121 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA 199 (353)
Q Consensus 121 ~l~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~ 199 (353)
....-.+|.|+++-|+|.||+......||++|++++ +.+++. +...+. ..+|+.++++
T Consensus 149 ~~~s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~a-----------GP~vv~----------~~~Ge~v~~e 207 (512)
T TIGR01117 149 TIASGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFIT-----------GPQVIK----------TVTGEEVTAE 207 (512)
T ss_pred HHHcCCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEec-----------ChHHHH----------hhcCcccchh
Confidence 112345899999999999999888789999999996 445542 111111 1356666666
Q ss_pred HH-------HHcCccceecCCC
Q 018632 200 EM-------MACGLATHYSVSE 214 (353)
Q Consensus 200 eA-------~~~Glv~~vv~~~ 214 (353)
|. ..-|++|.+++++
T Consensus 208 ~lGGa~~h~~~sGv~d~~~~de 229 (512)
T TIGR01117 208 QLGGAMAHNSVSGVAHFIAEDD 229 (512)
T ss_pred hcchHHHhccccceeEEecCCh
Confidence 65 2579999888764
No 143
>PRK10949 protease 4; Provisional
Probab=94.71 E-value=0.23 Score=51.45 Aligned_cols=84 Identities=15% Similarity=0.028 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHhcCCCccc--CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccccc
Q 018632 61 NMGAKLNKLFKAWENDPNIGF--GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 138 (353)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~v--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a~ 138 (353)
-.+.++.++|+.+..|+.|+. =.-..+. |..+.. .+.+.+.+..+....|||||.-+.. -
T Consensus 95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~g-G~~~a~----------------~~eI~~ai~~fk~sGKpVvA~~~~~-~ 156 (618)
T PRK10949 95 NSLFDIVNTIRQAKDDRNITGIVLDLKNFA-GADQPS----------------MQYIGKALREFRDSGKPVYAVGDSY-S 156 (618)
T ss_pred ccHHHHHHHHHHHhcCCCceEEEEEeCCCC-CccHHH----------------HHHHHHHHHHHHHhCCeEEEEecCc-c
Confidence 345689999999999999997 0001111 111111 1222334444556789999864444 4
Q ss_pred cccccccccCCeEEEeCceEEecc
Q 018632 139 GGGAGVSIPGTFRVACGKTVFATP 162 (353)
Q Consensus 139 GgG~~lal~cD~ria~~~a~f~~p 162 (353)
-+|.-||.+||-+++.+.+.+++.
T Consensus 157 s~~YyLASaAD~I~l~P~G~v~~~ 180 (618)
T PRK10949 157 QGQYYLASFANKIYLSPQGVVDLH 180 (618)
T ss_pred chhhhhhhhCCEEEECCCceEEEe
Confidence 568899999999999998877653
No 144
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=93.36 E-value=0.3 Score=50.03 Aligned_cols=141 Identities=13% Similarity=0.049 Sum_probs=83.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCC--cccCCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEc
Q 018632 57 ALNTNMGAKLNKLFKAWENDPN--IGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN 134 (353)
Q Consensus 57 al~~~~~~~L~~~l~~~~~d~~--v~vg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~ 134 (353)
+++++-.....+.++..+.-.- |.+-....|-.|.+-. .....+...+++.++....+|.|+.|=
T Consensus 381 ~l~~~~a~Kaarfi~lc~~~~iPlv~l~D~pGf~~G~~~E-------------~~G~~~~~a~l~~A~a~~~VP~isvi~ 447 (569)
T PLN02820 381 ILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSE-------------ASGIAKAGAKMVMAVACAKVPKITIIV 447 (569)
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCEEEEEECCCCCCCHHHH-------------HhhHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 4666666666666665554211 1111112244433222 233456677888999999999999999
Q ss_pred cccccccccccc----cCCeEEEeCceEEeccCCCcccccCccHHHHHhhc-C------h------HH-H-HHH--HhcC
Q 018632 135 GVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------G------HL-G-EFL--ALTG 193 (353)
Q Consensus 135 G~a~GgG~~lal----~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~------g------~~-a-~~l--~ltG 193 (353)
|.++|+|..-.+ ..|++++.+++ .+|+.++-++...+.+. + | .. + .+. -..-
T Consensus 448 g~a~G~g~~aM~g~~~~~d~~~awp~A-------~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (569)
T PLN02820 448 GGSFGAGNYGMCGRAYSPNFLFMWPNA-------RIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVEAYE 520 (569)
T ss_pred CCcchHHHHHhcCcCCCCCEEEECCCC-------eEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHHHHH
Confidence 999998755443 55676666555 55565555555555431 1 0 00 0 010 1112
Q ss_pred CCCCHHHHHHcCccceecCCCChh
Q 018632 194 AKLNGAEMMACGLATHYSVSEKLP 217 (353)
Q Consensus 194 ~~~~a~eA~~~Glv~~vv~~~~l~ 217 (353)
+..++-.|-+.|++|.|+++.+..
T Consensus 521 ~~~~p~~aa~~~~vD~VIdP~dTR 544 (569)
T PLN02820 521 REANPYYSTARLWDDGVIDPADTR 544 (569)
T ss_pred HhCCHHHHHHcCCcCcccCHHHHH
Confidence 356777888999999999887654
No 145
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=92.97 E-value=0.45 Score=43.11 Aligned_cols=125 Identities=15% Similarity=0.135 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHHhcCCCcc---c---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018632 58 LNTNMGAKLNKLFKAWENDPNIG---F---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 131 (353)
Q Consensus 58 l~~~~~~~L~~~l~~~~~d~~v~---v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIa 131 (353)
+|.++-+.+...|-.++.++.-+ . +.|+.-.+|.- ++..+..++-||-.
T Consensus 101 Idd~va~~viaqlL~Ld~ed~~K~I~lyINSPGG~vtaglA-------------------------IYDtMq~ik~~V~T 155 (275)
T KOG0840|consen 101 IDDDVANLVIAQLLYLDSEDPKKPIYLYINSPGGSVTAGLA-------------------------IYDTMQYIKPDVST 155 (275)
T ss_pred CcHHHHHHHHHHHHHhhccCCCCCeEEEEeCCCCccchhhh-------------------------HHHHHHhhCCCcee
Confidence 77888888888887777654433 2 55544433332 33344456667766
Q ss_pred EEccccccccccccccCCeEEEeCceEEeccCCCcccc-cCcc----HHHHHhh---cChHH----HHHHHhcC------
Q 018632 132 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH-PDAG----ASFYLSH---LPGHL----GEFLALTG------ 193 (353)
Q Consensus 132 av~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~-p~~g----~~~~l~r---~~g~~----a~~l~ltG------ 193 (353)
.+=|.|.+-|..|..+ .+.+-++++|..++=+. |-+| .+-+..+ ++-.. -.+.--||
T Consensus 156 ic~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i 230 (275)
T KOG0840|consen 156 ICVGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEVI 230 (275)
T ss_pred eehhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 6777777766554433 24455555555555443 2222 1111111 11100 01111244
Q ss_pred -------CCCCHHHHHHcCccceecC
Q 018632 194 -------AKLNGAEMMACGLATHYSV 212 (353)
Q Consensus 194 -------~~~~a~eA~~~Glv~~vv~ 212 (353)
+.++|+||+++||+|+|+.
T Consensus 231 ~~d~dRd~fmsa~EA~eyGliD~v~~ 256 (275)
T KOG0840|consen 231 EKDMDRDRFMSAEEAKEYGLIDKVID 256 (275)
T ss_pred HhhhcccccCCHHHHHHhcchhhhhc
Confidence 4489999999999999986
No 146
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=92.96 E-value=1.3 Score=40.61 Aligned_cols=145 Identities=12% Similarity=0.099 Sum_probs=91.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018632 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 120 (353)
Q Consensus 44 v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 120 (353)
++...++-.--.-+|..-.=+.+..+++.+-++.---+ .+| |+-+.+-. -...+ +......+.
T Consensus 124 vv~av~df~FmgGSmGsVvGeki~ra~E~A~e~k~P~v~f~aSG-----GARMQEg~--------lSLMQ-MaktsaAl~ 189 (294)
T COG0777 124 VVLAVMDFAFMGGSMGSVVGEKITRAIERAIEDKLPLVLFSASG-----GARMQEGI--------LSLMQ-MAKTSAALK 189 (294)
T ss_pred EEEEEEeccccccchhHHHHHHHHHHHHHHHHhCCCEEEEecCc-----chhHhHHH--------HHHHH-HHHHHHHHH
Confidence 55555655555678888888999999998876543222 322 33332210 01111 122334556
Q ss_pred HHhhCCCcEEEEEccccccc-cccccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHHHHhcCCCCCHH
Q 018632 121 LLGTHLKPHVAILNGVTMGG-GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA 199 (353)
Q Consensus 121 ~l~~~~kpvIaav~G~a~Gg-G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltG~~~~a~ 199 (353)
.+.....|.|+.+..+..|| -..+++..|+.||.++|.+++... |.+-....+-+- -.-=+++
T Consensus 190 ~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGp---------------RVIEQTire~LP-egfQ~aE 253 (294)
T COG0777 190 RLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGP---------------RVIEQTIREKLP-EGFQTAE 253 (294)
T ss_pred HHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcc---------------hhhhhhhcccCC-cchhhHH
Confidence 66778999999999999998 466999999999988887776522 222211111111 1133466
Q ss_pred HHHHcCccceecCCCChhH
Q 018632 200 EMMACGLATHYSVSEKLPL 218 (353)
Q Consensus 200 eA~~~Glv~~vv~~~~l~~ 218 (353)
-.++.|+||.||+..++..
T Consensus 254 fLlehG~iD~iv~R~elr~ 272 (294)
T COG0777 254 FLLEHGMIDMIVHRDELRT 272 (294)
T ss_pred HHHHcCCceeeecHHHHHH
Confidence 7789999999999877764
No 147
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=92.51 E-value=0.54 Score=47.54 Aligned_cols=152 Identities=14% Similarity=0.100 Sum_probs=88.9
Q ss_pred EEEcCCCCCC-CCCHHHHHHHHHHHHHHhcCCC--cccCCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHh
Q 018632 47 AILNRPSALN-ALNTNMGAKLNKLFKAWENDPN--IGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 123 (353)
Q Consensus 47 I~lnrp~~~N-al~~~~~~~L~~~l~~~~~d~~--v~vg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 123 (353)
|.-|+|.... +++++-.....+.++..+...- |.+-.-..|..|-+- +.....+...+++.++.
T Consensus 298 iian~~~~~~G~~~~~~a~K~arfi~lcd~~~iPlv~l~dtpGf~~g~~~-------------E~~g~~~~ga~~~~a~~ 364 (493)
T PF01039_consen 298 IIANNPRQRAGALDPDGARKAARFIRLCDAFNIPLVTLVDTPGFMPGPEA-------------ERAGIIRAGARLLYALA 364 (493)
T ss_dssp EEEE-TTCGGGEB-HHHHHHHHHHHHHHHHTT--EEEEEEECEB--SHHH-------------HHTTHHHHHHHHHHHHH
T ss_pred EEEeccccccccCChHHHHHHHHHHHHHHhhCCceEEEeecccccccchh-------------hhcchHHHHHHHHHHHH
Confidence 4446664222 6999999999999988886322 222111224333322 22334566678899999
Q ss_pred hCCCcEEEEEccccccccccccccC----CeEEEeCceEEeccCCCcccccCccHHHHHhhcChH---------HH--HH
Q 018632 124 THLKPHVAILNGVTMGGGAGVSIPG----TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH---------LG--EF 188 (353)
Q Consensus 124 ~~~kpvIaav~G~a~GgG~~lal~c----D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~---------~a--~~ 188 (353)
.+++|+|..|-|.++|+|....... |+++|.++++++ +.++-+....+.+.--. .+ .+
T Consensus 365 ~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~~-------vm~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~ 437 (493)
T PF01039_consen 365 EATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEIG-------VMGPEGAASILYRDELEAAEAEGADPEAQRAE 437 (493)
T ss_dssp HH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EEE-------SS-HHHHHHHHTHHHHHHSCHCCHSHHHHHHH
T ss_pred cCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcceee-------ecChhhhheeeehhhhhhhhcccchhHHHHHH
Confidence 9999999999999999887554444 788777666665 44444444333321100 00 11
Q ss_pred HHh--cCCCCCHHHHHHcCccceecCCCChhH
Q 018632 189 LAL--TGAKLNGAEMMACGLATHYSVSEKLPL 218 (353)
Q Consensus 189 l~l--tG~~~~a~eA~~~Glv~~vv~~~~l~~ 218 (353)
.+- .-...++..+...|++|.|+++.+...
T Consensus 438 ~~~~~~~~~~~~~~~a~~~~~D~ii~p~~tR~ 469 (493)
T PF01039_consen 438 KIAEYEDELSSPYRAASRGYVDDIIDPAETRK 469 (493)
T ss_dssp HHHHHHHHHSSHHHHHHTTSSSEESSGGGHHH
T ss_pred HHHHHHHhcCCHHHHHhcCCCCCccCHHHHHH
Confidence 110 112268889999999999999988764
No 148
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=90.80 E-value=0.33 Score=48.76 Aligned_cols=99 Identities=14% Similarity=0.091 Sum_probs=60.5
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCC--cccCCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHH
Q 018632 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--IGFGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 122 (353)
Q Consensus 45 ~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~--v~vg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 122 (353)
.++--+.+.+.-++.+-....+..+.+.+.++.. |.+ .=|+|+.+.+-. .....+.+ ...-...+
T Consensus 94 ~v~a~D~TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l----~dsgGari~~~v--------~~l~g~g~-iF~~~a~~ 160 (526)
T COG4799 94 FVFANDFTVKGGTLGEMTAKKILRAQELAIENGLPVIGL----NDSGGARIQEGV--------PSLAGYGR-IFYRNARA 160 (526)
T ss_pred EEEEecCceecccccccccchHHHHHHHHHHcCCCEEEE----EcccccccccCc--------cccccchH-HHHHHHHh
Confidence 3333344557778888778888888887776433 333 002223332110 11111111 11122334
Q ss_pred hhCCCcEEEEEccccccccccccccCCeEEEeCce
Q 018632 123 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 157 (353)
Q Consensus 123 ~~~~kpvIaav~G~a~GgG~~lal~cD~ria~~~a 157 (353)
... +|.|++|-|.|.|||.-+-..||++|+.++.
T Consensus 161 Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 161 SGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred ccC-CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 444 9999999999999999999999999999973
No 149
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=89.94 E-value=0.62 Score=45.72 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=47.7
Q ss_pred HHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhhe---eccC
Q 018632 289 STLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ---ILNK 351 (353)
Q Consensus 289 ~~a~~i~~~~p~a~~~~k~~l~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~egi~af---l~~~ 351 (353)
+.+.+|+..+|.++..+|+.++.. .....+.+..|...+..++. ++|+.|++.+| +++|
T Consensus 228 ~~~~~i~~~~p~av~~~k~~~~~~-~~~~~~~l~~~~~~i~~~f~---~~d~~ei~~al~~~~~kr 289 (401)
T PLN02157 228 EQLKKLLTDDPSVVESCLEKCAEV-AHPEKTGVIRRIDLLEKCFS---HDTVEEIIDSLEIEAGRR 289 (401)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhcc-cCCcchhHHHHHHHHHHHhc---CCCHHHHHHHHHhhhccc
Confidence 457888889999999999999865 34466777778888888776 99999999999 6554
No 150
>smart00250 PLEC Plectin repeat.
Probab=62.10 E-value=6.3 Score=24.67 Aligned_cols=18 Identities=39% Similarity=0.470 Sum_probs=16.9
Q ss_pred cCCCCCHHHHHHcCccce
Q 018632 192 TGAKLNGAEMMACGLATH 209 (353)
Q Consensus 192 tG~~~~a~eA~~~Glv~~ 209 (353)
||+++|-.||++.|+++.
T Consensus 18 t~~~lsv~eA~~~glid~ 35 (38)
T smart00250 18 TGQKLSVEEALRRGLIDP 35 (38)
T ss_pred CCCCcCHHHHHHcCCCCc
Confidence 899999999999999975
No 151
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=59.98 E-value=23 Score=32.03 Aligned_cols=98 Identities=14% Similarity=0.027 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEEcccccccccc-ccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhcChHHHHH
Q 018632 110 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 188 (353)
Q Consensus 110 ~~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~-lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~ 188 (353)
.++......+.....-.=|||+.|-|.+++|||- -.+.+|-.||-+ ++.+-..+-..+ .+..++.=..-.+
T Consensus 89 ~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~GlqA~rl~AL~-------ga~i~vM~~~s~-ARVTk~~ve~Le~ 160 (234)
T PF06833_consen 89 QALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQANRLIALP-------GAMIHVMGKPSA-ARVTKRPVEELEE 160 (234)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHHhcchhcCC-------CCeeecCChHHh-HHHhhcCHHHHHH
Confidence 3444455566666778999999999999999976 668888887755 333333322222 2333222111334
Q ss_pred HHhcCCC--CCHHHHHHcCccceecCCCC
Q 018632 189 LALTGAK--LNGAEMMACGLATHYSVSEK 215 (353)
Q Consensus 189 l~ltG~~--~~a~eA~~~Glv~~vv~~~~ 215 (353)
+.-+--. .+.+--.++|.++++++.+.
T Consensus 161 la~s~PvfA~gi~ny~~lG~l~~l~~~~~ 189 (234)
T PF06833_consen 161 LAKSVPVFAPGIENYAKLGALDELWDGDL 189 (234)
T ss_pred HhhcCCCcCCCHHHHHHhccHHHHhcccc
Confidence 4333333 45667789999999998544
No 152
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=59.38 E-value=73 Score=32.41 Aligned_cols=149 Identities=17% Similarity=0.142 Sum_probs=87.6
Q ss_pred EEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHh
Q 018632 48 ILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 123 (353)
Q Consensus 48 ~lnrp~-~~Nal~~~~~~~L~~~l~~~~~d~~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 123 (353)
.=|.|. ..-+|+.+-...-.+.++.-+.. ++-+ -.-..|..|-|-.. ....+....++.++.
T Consensus 329 IANqp~~~~G~l~~~sa~KaArFI~~cd~~-~iPlv~L~d~pGFm~G~~~E~-------------~giik~Gakl~~A~a 394 (526)
T COG4799 329 IANQPRHLGGVLDIDSADKAARFIRLCDAF-NIPLVFLVDTPGFMPGTDQEY-------------GGIIKHGAKLLYAVA 394 (526)
T ss_pred EecCccccccccchHHHHHHHHHHHhhhcc-CCCeEEEeCCCCCCCChhHHh-------------ChHHHhhhHHHhhHh
Confidence 335444 45678888888877777444332 2222 33345777665432 234566677999999
Q ss_pred hCCCcEEEEEcccccccccccc----ccCCeEEEeCceEEeccCCCcccccCccHHHHHhh-cChHH-H--H-H------
Q 018632 124 THLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL-G--E-F------ 188 (353)
Q Consensus 124 ~~~kpvIaav~G~a~GgG~~la----l~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~g~~-a--~-~------ 188 (353)
...+|.|..|-|.++|||.... +.+|+.+|.+++ ++|+.-+-|+.-.+.+ .+... . . +
T Consensus 395 eatVPkitvI~rkayGga~~~M~~~~~~~~~~~AwP~a-------~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~~~~ 467 (526)
T COG4799 395 EATVPKITVITRKAYGGAYYVMGGKALGPDFNYAWPTA-------EIAVMGPEGAVSILYRKELAAAERPEEREALLRKQ 467 (526)
T ss_pred hccCCeEEEEecccccceeeeecCccCCCceeEecCcc-------eeeecCHHHHHHHHHHHHhhcccCchhHHHHHHHH
Confidence 9999999999999999996544 345555555554 4455433333333332 22111 0 0 0
Q ss_pred H--HhcCCCCCHHHHHHcCccceecCCCChh
Q 018632 189 L--ALTGAKLNGAEMMACGLATHYSVSEKLP 217 (353)
Q Consensus 189 l--~ltG~~~~a~eA~~~Glv~~vv~~~~l~ 217 (353)
+ -+.-+-.++--|.+.|++|.|+++.+..
T Consensus 468 ~~~eY~~~~~~p~~aa~r~~iD~vI~p~~tR 498 (526)
T COG4799 468 LIAEYEEQFSNPYYAAERGYIDAVIDPADTR 498 (526)
T ss_pred HHHHHHHhccchHHHHHhCCCCcccCHHHHH
Confidence 0 0111224556677889999999876543
No 153
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=54.15 E-value=4.5 Score=26.45 Aligned_cols=19 Identities=32% Similarity=0.408 Sum_probs=16.2
Q ss_pred hcCCCCCHHHHHHcCccce
Q 018632 191 LTGAKLNGAEMMACGLATH 209 (353)
Q Consensus 191 ltG~~~~a~eA~~~Glv~~ 209 (353)
-||++++-++|++.||++.
T Consensus 17 ~tg~~lsv~~A~~~glId~ 35 (45)
T PF00681_consen 17 ETGERLSVEEAIQRGLIDS 35 (45)
T ss_dssp TTTEEEEHHHHHHTTSS-H
T ss_pred CCCeEEcHHHHHHCCCcCH
Confidence 3789999999999999975
No 154
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=50.68 E-value=25 Score=34.80 Aligned_cols=74 Identities=11% Similarity=0.190 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhcCCCccc---CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccc
Q 018632 61 NMGAKLNKLFKAWENDPNIGF---GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 137 (353)
Q Consensus 61 ~~~~~L~~~l~~~~~d~~v~v---g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav~G~a 137 (353)
..-.++.++++.++..+++.+ |.| |+-+. +++.|.+. .+.++++.+++|||++| ||-
T Consensus 176 ~A~~eIv~aI~~an~~~~~DvlIVaRG-----GGSiE------------DLW~FNdE--~vaRAi~~s~iPvISAV-GHE 235 (440)
T COG1570 176 GAAEEIVEAIERANQRGDVDVLIVARG-----GGSIE------------DLWAFNDE--IVARAIAASRIPVISAV-GHE 235 (440)
T ss_pred CcHHHHHHHHHHhhccCCCCEEEEecC-----cchHH------------HHhccChH--HHHHHHHhCCCCeEeec-ccC
Confidence 445667777777776655554 443 22333 33333332 47889999999999988 221
Q ss_pred cccccccc-ccCCeEEEeCc
Q 018632 138 MGGGAGVS-IPGTFRVACGK 156 (353)
Q Consensus 138 ~GgG~~la-l~cD~ria~~~ 156 (353)
. =+.|+ +.+|+|-.|+.
T Consensus 236 t--D~tL~DfVAD~RApTPT 253 (440)
T COG1570 236 T--DFTLADFVADLRAPTPT 253 (440)
T ss_pred C--CccHHHhhhhccCCCch
Confidence 1 12333 55677766653
No 155
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=50.23 E-value=27 Score=33.03 Aligned_cols=75 Identities=13% Similarity=0.204 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhcCC-----Cccc-CCCCCcccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 018632 60 TNMGAKLNKLFKAWENDP-----NIGF-GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 133 (353)
Q Consensus 60 ~~~~~~L~~~l~~~~~d~-----~v~v-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kpvIaav 133 (353)
.....++..+|+.++... ++-+ +.| |+.+.++.. |.. ..+.+++..++.|||++|
T Consensus 54 ~~A~~~I~~al~~~~~~~~~~~~Dviii~RG-----GGs~eDL~~------------FN~--e~varai~~~~~PvisaI 114 (319)
T PF02601_consen 54 EGAAASIVSALRKANEMGQADDFDVIIIIRG-----GGSIEDLWA------------FND--EEVARAIAASPIPVISAI 114 (319)
T ss_pred cchHHHHHHHHHHHHhccccccccEEEEecC-----CCChHHhcc------------cCh--HHHHHHHHhCCCCEEEec
Confidence 345667777777776543 4444 333 222222222 211 247889999999999987
Q ss_pred cccccccccccc-ccCCeEEEeCc
Q 018632 134 NGVTMGGGAGVS-IPGTFRVACGK 156 (353)
Q Consensus 134 ~G~a~GgG~~la-l~cD~ria~~~ 156 (353)
||-.- +.|+ +.||+|..||.
T Consensus 115 -GHe~D--~ti~D~vAd~ra~TPt 135 (319)
T PF02601_consen 115 -GHETD--FTIADFVADLRAPTPT 135 (319)
T ss_pred -CCCCC--chHHHHHHHhhCCCHH
Confidence 33221 2222 56777766664
No 156
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=48.21 E-value=78 Score=28.71 Aligned_cols=132 Identities=11% Similarity=0.021 Sum_probs=75.0
Q ss_pred ccccccccccccccC-CeEEEeCceEEeccCCCcccccCccHH-----HHHhhcChHH-HHHHHhcCCCCCHHHHHHcCc
Q 018632 134 NGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGFHPDAGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMMACGL 206 (353)
Q Consensus 134 ~G~a~GgG~~lal~c-D~ria~~~a~f~~pe~~~G~~p~~g~~-----~~l~r~~g~~-a~~l~ltG~~~~a~eA~~~Gl 206 (353)
-|..+...+-+..++ |-+++.+.+.++++....-+..-.|.. .+..+.+... |.++.+-.+.++.++..+.
T Consensus 108 gG~~Lal~cD~ria~~~a~f~~pe~~~G~~g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~-- 185 (249)
T PRK07938 108 GGIGLVGNADVIVASDDATFGLPEVDRGALGAATHLQRLVPQHLMRALFFTAATITAAELHHFGSVEEVVPRDQLDEA-- 185 (249)
T ss_pred hHHHHHHhCCEEEEeCCCEeeCccceecCchhHHHHHHhcCHHHHHHHHHhCCcCCHHHHHHCCCccEEeCHHHHHHH--
Confidence 344455555555554 567778888888763222121112221 1234556666 8888888888887765532
Q ss_pred cceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCC-hhhHHHHHHHHHHhcCc-CCHHHHHHHHHhcc
Q 018632 207 ATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFGL-DTVEEIIDSLESEA 279 (353)
Q Consensus 207 v~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~i~~~l~~~~ 279 (353)
..+.++.+ +..+|.++..+|+.++...... .............++.. +..+.+.++++|++
T Consensus 186 ---------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~ekr~ 248 (249)
T PRK07938 186 ---------ALEVARKI---AAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNLAGVSDEHRDAFVEKRK 248 (249)
T ss_pred ---------HHHHHHHH---HhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCccHHHHHHHHHhcCC
Confidence 33345444 4568899999999887653322 22233334456666654 55555556666653
No 157
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=44.52 E-value=39 Score=33.46 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEcccccccccc---ccccCCeEEEeCceEEeccCCCcccccCccHHHHHhhc-----C
Q 018632 111 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAG---VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-----P 182 (353)
Q Consensus 111 ~~~~~~~l~~~l~~~~kpvIaav~G~a~GgG~~---lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r~-----~ 182 (353)
..+....++.+.....+|-|..+-|.++||-.. -.+.-|+.++.++|+++.-..+ ++.-.+.+. .
T Consensus 407 IaK~gAklv~a~a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~IavmG~~-------~a~~Vi~q~~~e~a~ 479 (536)
T KOG0540|consen 407 IAKHGAKLVYAVACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAVMGGK-------QAANVIFQITLEKAV 479 (536)
T ss_pred hhhhhhhhhhhhhhccCceEEEEecCccCCcccccccccCCceeEEcccceeeecccc-------chhhhhhhhhhhhhh
Confidence 345556788889999999999999999997544 5577899999888887754221 111122222 2
Q ss_pred hH--HHHHHHhcCCCCCHHHHHHcCccceecCCCChhH
Q 018632 183 GH--LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL 218 (353)
Q Consensus 183 g~--~a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~ 218 (353)
.. ...|.+ |.++. |...||+|.|+++.+...
T Consensus 480 ~~~~~~~E~f--~npy~---a~~Rg~~D~II~p~~tR~ 512 (536)
T KOG0540|consen 480 ALKAPYIEKF--GNPYY---AAARGWDDGIIDPSDTRK 512 (536)
T ss_pred hhcchHHHHh--cCccH---HHHhhccccccChhHhhH
Confidence 22 233433 55443 567899999999877553
No 158
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=43.62 E-value=39 Score=33.62 Aligned_cols=37 Identities=11% Similarity=0.089 Sum_probs=24.8
Q ss_pred HHHHHHhhCCCcEEEEEcccccccccccc-ccCCeEEEeCc
Q 018632 117 SFIYLLGTHLKPHVAILNGVTMGGGAGVS-IPGTFRVACGK 156 (353)
Q Consensus 117 ~l~~~l~~~~kpvIaav~G~a~GgG~~la-l~cD~ria~~~ 156 (353)
.+.++++.+|.|||++| ||-.- +.|+ +.+|.|..|+.
T Consensus 210 ~~~rai~~~~~Pvis~i-GHe~D--~ti~D~vAd~ra~TPt 247 (432)
T TIGR00237 210 KVARAIFLSKIPIISAV-GHETD--FTISDFVADLRAPTPS 247 (432)
T ss_pred HHHHHHHcCCCCEEEec-CcCCC--ccHHHHhhhccCCCcH
Confidence 47889999999999987 22111 2233 66777777663
No 159
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=36.14 E-value=1.5e+02 Score=27.21 Aligned_cols=140 Identities=10% Similarity=0.030 Sum_probs=77.9
Q ss_pred CCCcEEEEEccccccccccccccC-CeEEEeCceEEeccCCCccc---ccCccHH------HHHhhcChHH-HHHHHhcC
Q 018632 125 HLKPHVAILNGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGF---HPDAGAS------FYLSHLPGHL-GEFLALTG 193 (353)
Q Consensus 125 ~~kpvIaav~G~a~GgG~~lal~c-D~ria~~~a~f~~pe~~~G~---~p~~g~~------~~l~r~~g~~-a~~l~ltG 193 (353)
..-+.++. |..+...+.+..++ |-+++.+.+.++++...+|. .|..-+. .+..+.+... |.++.+-.
T Consensus 116 v~G~a~Gg--G~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~~a~eA~~~Glv~ 193 (276)
T PRK05864 116 VNGPAIGG--GLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVDAEEAERIGLVS 193 (276)
T ss_pred ECCEeehh--HHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCccCHHHHHHcCCcc
Confidence 34444433 55666667666554 56778888888987655553 3332221 1233445555 77777777
Q ss_pred CCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCC-C-hhhHHHHHH-HHHHhc-CcCCHH
Q 018632 194 AKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-D-KNSVIHRID-IVDKCF-GLDTVE 269 (353)
Q Consensus 194 ~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~-~~~~~~-~~~~~~ 269 (353)
+.++.++..+ ...+.++.+ +..+|.++..+|+.++..... . ......... ....++ +.+..+
T Consensus 194 ~vv~~~~l~~-----------~a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~d~~e 259 (276)
T PRK05864 194 RQVPDEQLLD-----------TCYAIAARM---AGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLLTANFEE 259 (276)
T ss_pred eeeCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccChhHHH
Confidence 7787776543 233455544 456888999999888754321 1 111111111 111234 455566
Q ss_pred HHHHHHHhccC
Q 018632 270 EIIDSLESEAS 280 (353)
Q Consensus 270 ~i~~~l~~~~~ 280 (353)
.+.++++++.+
T Consensus 260 ~~~af~~kr~p 270 (276)
T PRK05864 260 AVAARAEKRPP 270 (276)
T ss_pred HHHHHhccCCC
Confidence 66666777654
No 160
>KOG3997 consensus Major apurinic/apyrimidinic endonuclease/3'-repair diesterase APN1 [Replication, recombination and repair]
Probab=36.13 E-value=58 Score=29.23 Aligned_cols=57 Identities=23% Similarity=0.287 Sum_probs=45.5
Q ss_pred EEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc--CCCCCcccCcchhh
Q 018632 38 VEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF--GSGRAFCAGGDIVS 95 (353)
Q Consensus 38 ~~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v--g~g~~F~aG~Dl~~ 95 (353)
++...+|.+++=|-....|.+. ..+.+|...+..++..+.+.| ..-..|.+|.|++.
T Consensus 134 ~eetk~V~ivlEnMAGqGn~vG-~tfeelk~ii~~Ikdk~RigVClDTCH~FaaGyDI~T 192 (281)
T KOG3997|consen 134 VEETKNVIIVLENMAGQGNSVG-GTFEELKFIIGKIKDKSRIGVCLDTCHTFAAGYDIRT 192 (281)
T ss_pred HHhccceEEEeecccCCCCccc-ccHHHHHHHHHhhcchhhheeeHhhhhhhccccccch
Confidence 3444567777778788889988 567889999999998888888 66688999999974
No 161
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=33.41 E-value=60 Score=32.21 Aligned_cols=37 Identities=8% Similarity=0.157 Sum_probs=24.9
Q ss_pred HHHHHHhhCCCcEEEEEcccccccccccc-ccCCeEEEeCc
Q 018632 117 SFIYLLGTHLKPHVAILNGVTMGGGAGVS-IPGTFRVACGK 156 (353)
Q Consensus 117 ~l~~~l~~~~kpvIaav~G~a~GgG~~la-l~cD~ria~~~ 156 (353)
.+.++++.++.|||++| ||-.- +.|+ +.||.|..||.
T Consensus 215 ~v~~ai~~~~~Pvis~I-GHE~D--~tl~D~vAd~ra~TPt 252 (438)
T PRK00286 215 AVARAIAASRIPVISAV-GHETD--FTIADFVADLRAPTPT 252 (438)
T ss_pred HHHHHHHcCCCCEEEec-cCCCC--ccHHHHhhhccCCChH
Confidence 57889999999999987 22211 2222 66777777664
No 162
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=32.24 E-value=2e+02 Score=26.93 Aligned_cols=89 Identities=8% Similarity=-0.107 Sum_probs=60.7
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccC--CChhhHHH
Q 018632 178 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY--PDKNSVIH 254 (353)
Q Consensus 178 l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 254 (353)
..+.++.. |.++.|-.+.+..++.... ..+.+..+ +..+|.++...|+.++.... +.......
T Consensus 176 tg~~i~A~eA~~~GLV~~vv~~~~l~~~-----------a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~l~~~~~~ 241 (298)
T PRK12478 176 TGRPLTGVQAAEAELINEAVPFERLEAR-----------VAEVATEL---ARIPLSQLQAQKLIVNQAYENMGLASTQTL 241 (298)
T ss_pred cCCccCHHHHHHcCCcceecCHHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 34566666 8888888888888876652 44455544 45789999999998876433 23444455
Q ss_pred HHHHHHHhcCcCCH---------HHHHHHHHhccC
Q 018632 255 RIDIVDKCFGLDTV---------EEIIDSLESEAS 280 (353)
Q Consensus 255 ~~~~~~~~~~~~~~---------~~i~~~l~~~~~ 280 (353)
.......++..++. |.+-++++||.+
T Consensus 242 e~~~~~~~~~s~d~~e~~~~~~~egv~Af~ekR~p 276 (298)
T PRK12478 242 GGILDGLMRNTPDALEFIRTAETQGVRAAVERRDG 276 (298)
T ss_pred HHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhcCC
Confidence 56667777876655 477788888865
No 163
>PLN02921 naphthoate synthase
Probab=30.25 E-value=1.8e+02 Score=27.68 Aligned_cols=90 Identities=12% Similarity=0.007 Sum_probs=55.9
Q ss_pred HhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHH
Q 018632 178 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI 256 (353)
Q Consensus 178 l~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (353)
..+.+... |.++.|-.+.++.++..+ ...+.++.+ +..+|.++..+|+.++..............
T Consensus 228 tG~~~~A~eA~~~GLV~~vv~~~~l~~-----------~a~~~a~~l---a~~~p~al~~~K~~l~~~~~~~~~~~~~~~ 293 (327)
T PLN02921 228 LARFYTASEALKMGLVNTVVPLDELEG-----------ETVKWCREI---LRNSPTAIRVLKSALNAADDGHAGLQELGG 293 (327)
T ss_pred cCCcCCHHHHHHCCCceEEeCHHHHHH-----------HHHHHHHHH---HccCHHHHHHHHHHHHHhhcchhHHHHHHH
Confidence 44556666 888888878888877654 234455544 456889999999988765433222222223
Q ss_pred HHHHHhcC-cCCHHHHHHHHHhccCC
Q 018632 257 DIVDKCFG-LDTVEEIIDSLESEASL 281 (353)
Q Consensus 257 ~~~~~~~~-~~~~~~i~~~l~~~~~~ 281 (353)
.....++. .+..+.+.++++++.+.
T Consensus 294 ~~~~~~~~s~d~~egi~Af~ekr~p~ 319 (327)
T PLN02921 294 NATLLFYGSEEGNEGRTAYLEGRAPD 319 (327)
T ss_pred HHHHHHhcCHHHHHHHHHHhccCCCC
Confidence 45666665 45666666777877553
No 164
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=28.27 E-value=1.8e+02 Score=27.87 Aligned_cols=150 Identities=11% Similarity=0.042 Sum_probs=80.4
Q ss_pred hhCCCcEEEEEccccccccccccccC-CeEEEeCceEEeccCCCcc--cccCccHH-----HHHhhcChHH-HHHHHhcC
Q 018632 123 GTHLKPHVAILNGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIG--FHPDAGAS-----FYLSHLPGHL-GEFLALTG 193 (353)
Q Consensus 123 ~~~~kpvIaav~G~a~GgG~~lal~c-D~ria~~~a~f~~pe~~~G--~~p~~g~~-----~~l~r~~g~~-a~~l~ltG 193 (353)
....-+.++. |..+...+.+..++ |-+++.+.+.++++-..-| ..|..++. .+..+.+... |.++.+-.
T Consensus 105 AaVnG~a~Gg--G~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~llltG~~i~A~eA~~~GLv~ 182 (342)
T PRK05617 105 ALMDGIVMGG--GVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAADALYAGLAD 182 (342)
T ss_pred EEEcCEEEcc--HhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHHHHHcCCCCCHHHHHHcCCcc
Confidence 3444444444 55566666666554 5677788888888432211 12332221 1122344555 67776666
Q ss_pred CCCCHHHHHHc------------------------------------CccceecCCCChhH------------HHHHHHh
Q 018632 194 AKLNGAEMMAC------------------------------------GLATHYSVSEKLPL------------IEEELGK 225 (353)
Q Consensus 194 ~~~~a~eA~~~------------------------------------Glv~~vv~~~~l~~------------~~~~l~~ 225 (353)
+.++.++.... ..+++++....+.. ..+.+.+
T Consensus 183 ~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~a~~~a~~ 262 (342)
T PRK05617 183 HFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDIIAALEADGGEFAAKTADT 262 (342)
T ss_pred eecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHHhccHHHHHHHHHH
Confidence 77777765432 11122222111111 2233467
Q ss_pred hhcCCHHHHHHHHHHhhcccCCC-hhhHHHHHHHHHHhcCcCCHHHHHHH
Q 018632 226 LVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFGLDTVEEIIDS 274 (353)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~ 274 (353)
+...+|.++...|+.+....... .............++..++..+.+++
T Consensus 263 i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~egv~a 312 (342)
T PRK05617 263 LRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLRSPDFVEGVRA 312 (342)
T ss_pred HHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCchhhccce
Confidence 88889999999999987654332 33344445566777765555555444
No 165
>PLN02888 enoyl-CoA hydratase
Probab=26.77 E-value=1.4e+02 Score=27.25 Aligned_cols=92 Identities=8% Similarity=0.086 Sum_probs=56.4
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCC-hhhHHHHH
Q 018632 179 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 256 (353)
Q Consensus 179 ~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 256 (353)
.+.+... |.++.+-.+.++.++..+. ..+.++.+ +..+|.++..+|+.++...... ........
T Consensus 167 g~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~ 232 (265)
T PLN02888 167 AMPLTAETAERWGLVNHVVEESELLKK-----------AREVAEAI---IKNNQGMVLRYKSVINDGLKLDLGHALQLEK 232 (265)
T ss_pred CCccCHHHHHHcCCccEeeChHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 3455555 7888777788876655432 23345444 4567889999999887643322 22233333
Q ss_pred HHHHHhc---CcCCHHHHHHHHHhccCCCCC
Q 018632 257 DIVDKCF---GLDTVEEIIDSLESEASLIND 284 (353)
Q Consensus 257 ~~~~~~~---~~~~~~~i~~~l~~~~~~~~~ 284 (353)
.....++ +.+..+.+.++++++.++..+
T Consensus 233 ~~~~~~~~~~~~d~~e~~~af~ekr~~~~~~ 263 (265)
T PLN02888 233 ERAHDYYNGMTKEQFQKMQEFIAGRSSKKPS 263 (265)
T ss_pred HHHHHHhccCCHHHHHHHHHHHhcCCCCCCC
Confidence 4455553 456777777888888776543
No 166
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=25.97 E-value=3.1e+02 Score=24.86 Aligned_cols=87 Identities=10% Similarity=0.098 Sum_probs=53.9
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCC-ChhhHHHHHH
Q 018632 180 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIHRID 257 (353)
Q Consensus 180 r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 257 (353)
+.+... |.++.|-.+.++.++..+ ...+.++.+ +..+|.++..+|+.++..... ..........
T Consensus 169 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~ 234 (260)
T PRK05980 169 DAFSAERALEIGLVNAVVPHEELLP-----------AARALARRI---IRHSPVAVAAILTAVTRGLNLSIAEGLLIESE 234 (260)
T ss_pred CccCHHHHHHcCCCCcccCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 445555 888888888888777554 234455544 446788999999888765332 2333444455
Q ss_pred HHHHhcCcC-CHHHHHHHHHhccC
Q 018632 258 IVDKCFGLD-TVEEIIDSLESEAS 280 (353)
Q Consensus 258 ~~~~~~~~~-~~~~i~~~l~~~~~ 280 (353)
.+..++..+ ..+.+.++++++.+
T Consensus 235 ~~~~~~~~~~~~e~~~af~~kr~p 258 (260)
T PRK05980 235 QFARMAGSADLREGLAAWIERRRP 258 (260)
T ss_pred HHHHHhcChhHHHHHHHHhccCCC
Confidence 677777654 55555556666643
No 167
>COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
Probab=24.90 E-value=4.1e+02 Score=23.88 Aligned_cols=55 Identities=13% Similarity=0.075 Sum_probs=36.3
Q ss_pred ccCccHHHHHhhcChHH-HHHHHhcC---CCCCHHHHHHcCccceecCCCChhHHHHHH
Q 018632 169 HPDAGASFYLSHLPGHL-GEFLALTG---AKLNGAEMMACGLATHYSVSEKLPLIEEEL 223 (353)
Q Consensus 169 ~p~~g~~~~l~r~~g~~-a~~l~ltG---~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l 223 (353)
.|++-|..+|+.+.... .-+.++.. +.=+-++|+++|.+|.++.|=.++.+.++|
T Consensus 56 mPd~~Gi~lL~~ir~~~~~~DVI~iTAA~d~~tI~~alr~Gv~DYLiKPf~~eRl~~aL 114 (224)
T COG4565 56 MPDGNGIELLPELRSQHYPVDVIVITAASDMETIKEALRYGVVDYLIKPFTFERLQQAL 114 (224)
T ss_pred cCCCccHHHHHHHHhcCCCCCEEEEeccchHHHHHHHHhcCchhheecceeHHHHHHHH
Confidence 57777777777655443 33333222 223457999999999999987777666655
No 168
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=24.15 E-value=2.1e+02 Score=26.00 Aligned_cols=87 Identities=9% Similarity=-0.092 Sum_probs=51.9
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHH
Q 018632 180 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 258 (353)
Q Consensus 180 r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
+.+... |.++.|-.+.++.++..+. ..+.++.+ +..+|.++..+|+.++................
T Consensus 166 ~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~~ 231 (259)
T TIGR01929 166 RQYDAEQALDMGLVNTVVPLADLEKE-----------TVRWCREI---LQKSPMAIRMLKAALNADCDGQAGLQELAGNA 231 (259)
T ss_pred CccCHHHHHHcCCcccccCHHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHhhhccchHHHHHHHHH
Confidence 445555 7888788888887776542 33445544 45688899999988876433222222222345
Q ss_pred HHHhcCc-CCHHHHHHHHHhccC
Q 018632 259 VDKCFGL-DTVEEIIDSLESEAS 280 (353)
Q Consensus 259 ~~~~~~~-~~~~~i~~~l~~~~~ 280 (353)
...++.. +..+.+.++++++.+
T Consensus 232 ~~~~~~~~d~~egi~af~~kr~p 254 (259)
T TIGR01929 232 TMLFYMTEEGQEGRNAFLEKRQP 254 (259)
T ss_pred HHHHhcCccHHHHHHHHhccCCC
Confidence 5666654 455555566777654
No 169
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=22.38 E-value=1.8e+02 Score=26.45 Aligned_cols=89 Identities=13% Similarity=0.118 Sum_probs=53.2
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCC-hhhHHHHHH
Q 018632 180 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 257 (353)
Q Consensus 180 r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 257 (353)
+.+... |.++.+-.+.+..++..+. ..+.++.+ +..+|.++...|+.++...... .........
T Consensus 161 ~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 226 (255)
T PRK08150 161 RVYDAQEGERLGLAQYLVPAGEALDK-----------AMELARRI---AQNAPLTNFAVLNALPRIADMSADDGLFVESL 226 (255)
T ss_pred CcCCHHHHHHcCCccEeeCchHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 445555 7787777787877765432 23345444 4568888989998887643322 222333344
Q ss_pred HHHHhcCc-CCHHHHHHHHHhccCCC
Q 018632 258 IVDKCFGL-DTVEEIIDSLESEASLI 282 (353)
Q Consensus 258 ~~~~~~~~-~~~~~i~~~l~~~~~~~ 282 (353)
....+++. +..+.+.++++++.++.
T Consensus 227 ~~~~~~~s~d~~eg~~af~~kr~p~~ 252 (255)
T PRK08150 227 MAAVAQSAPEAKERLRAFLEKKAAKV 252 (255)
T ss_pred HHHHHhcCHHHHHHHHHHhccCCCCC
Confidence 55666754 55666666677775543
No 170
>PLN02600 enoyl-CoA hydratase
Probab=22.23 E-value=2.1e+02 Score=25.90 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=54.7
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCC-hhhHHHHHH
Q 018632 180 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 257 (353)
Q Consensus 180 r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 257 (353)
+.+... |.++.+-.+.++.++..+ +..+.++.+ +..+|.++..+|+.++...... .........
T Consensus 157 ~~~~a~eA~~~Glv~~vv~~~~~~~-----------~a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~ 222 (251)
T PLN02600 157 RRIGAREAASMGLVNYCVPAGEAYE-----------KALELAQEI---NQKGPLAIKMAKKAINEGSEVDMASGLEIEEE 222 (251)
T ss_pred CccCHHHHHHcCCCcEeeChhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHccCCHHHHHHHHHH
Confidence 455555 778777778888777554 233345544 5578899999999887654332 233334455
Q ss_pred HHHHhcCc-CCHHHHHHHHHhccC
Q 018632 258 IVDKCFGL-DTVEEIIDSLESEAS 280 (353)
Q Consensus 258 ~~~~~~~~-~~~~~i~~~l~~~~~ 280 (353)
....++.. +..+.+.++++++.+
T Consensus 223 ~~~~~~~~~d~~eg~~af~ekr~p 246 (251)
T PLN02600 223 CYEQVLKTKDRLEGLAAFAEKRKP 246 (251)
T ss_pred HHHHHhCCHHHHHHHHHHhcCCCC
Confidence 67777765 455556566777754
No 171
>PRK08321 naphthoate synthase; Validated
Probab=21.35 E-value=2.1e+02 Score=26.80 Aligned_cols=134 Identities=10% Similarity=0.045 Sum_probs=73.8
Q ss_pred ccccccccccccccC--CeEEEeCceEEeccCCCcc--cccC-ccH-----HHHHhhcChHH-HHHHHhcCCCCCHHHHH
Q 018632 134 NGVTMGGGAGVSIPG--TFRVACGKTVFATPETLIG--FHPD-AGA-----SFYLSHLPGHL-GEFLALTGAKLNGAEMM 202 (353)
Q Consensus 134 ~G~a~GgG~~lal~c--D~ria~~~a~f~~pe~~~G--~~p~-~g~-----~~~l~r~~g~~-a~~l~ltG~~~~a~eA~ 202 (353)
-|..+...+.+..++ |-+++-+.+.+++.-...| ..|. .|. ..+..+.++.. |.++.+--+.+..++..
T Consensus 149 gG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~ 228 (302)
T PRK08321 149 GGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELE 228 (302)
T ss_pred HHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHH
Confidence 344455566666666 4677777777775322111 1222 111 11223445555 77777777888877654
Q ss_pred HcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHHHHHhcCc-CCHHHHHHHHHhccCC
Q 018632 203 ACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL-DTVEEIIDSLESEASL 281 (353)
Q Consensus 203 ~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~l~~~~~~ 281 (353)
+ ...+.++.+ +..++.+++.+|+.+....................++.. +..+.+.++++++.+.
T Consensus 229 ~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~~~~~~~~~~d~~egi~af~ekr~p~ 294 (302)
T PRK08321 229 T-----------EALEWAREI---NGKSPTAMRMLKYAFNLTDDGLVGQQLFAGEATRLAYMTDEAQEGRDAFLEKRDPD 294 (302)
T ss_pred H-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHhcCHHHHHHHHHHhccCCCC
Confidence 3 233345444 456888889999888654332222223334456667765 4555566667776543
No 172
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=21.01 E-value=2.1e+02 Score=26.26 Aligned_cols=89 Identities=7% Similarity=-0.114 Sum_probs=52.2
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHH
Q 018632 179 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 257 (353)
Q Consensus 179 ~r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (353)
.+.++.. |.++.|-.+.++.++..+. ..+.++.+ +..+|.++..+|+.++...............
T Consensus 175 g~~~~A~eA~~~GLv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~ 240 (273)
T PRK07396 175 CRQYDAQEALDMGLVNTVVPLADLEKE-----------TVRWCREM---LQNSPMALRCLKAALNADCDGQAGLQELAGN 240 (273)
T ss_pred CCCcCHHHHHHcCCcCeecCHHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHhhhccHHHHHHHHHH
Confidence 4556666 8888888888887765542 23344444 4568888888998876543221111112234
Q ss_pred HHHHhcCcC-CHHHHHHHHHhccCC
Q 018632 258 IVDKCFGLD-TVEEIIDSLESEASL 281 (353)
Q Consensus 258 ~~~~~~~~~-~~~~i~~~l~~~~~~ 281 (353)
....++..+ ..+.+.++++++.+.
T Consensus 241 ~~~~~~~~~d~~egi~af~~kr~p~ 265 (273)
T PRK07396 241 ATMLFYMTEEAQEGRNAFNEKRQPD 265 (273)
T ss_pred HHHHHhcChhHHHHHHHHhCCCCCC
Confidence 455666554 455555667776543
No 173
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=20.85 E-value=2.3e+02 Score=26.53 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=43.7
Q ss_pred EEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCccc--CCCCCcccCcchhhHHHhhhcCChHHH--------
Q 018632 39 EGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF--GSGRAFCAGGDIVSLYHFMNQGKLEEC-------- 108 (353)
Q Consensus 39 ~~~~~v~~I~lnrp~~~Nal~~~~~~~L~~~l~~~~~d~~v~v--g~g~~F~aG~Dl~~~~~~~~~~~~~~~-------- 108 (353)
.+.++|++|. | .-.++-++..+|.++ .-.+.. |-|.-=-.|.++-+....+.+++..+.
T Consensus 143 ~~~G~IGiVS--r---SGTLTyE~~~qlt~~------G~GqS~~IGiGGDpi~Gt~fid~L~~fe~Dp~T~~ivmiGEiG 211 (293)
T COG0074 143 YKPGNIGIVS--R---SGTLTYEAVSQLTEA------GLGQSTAIGIGGDPIPGTSFIDALEMFEADPETEAIVMIGEIG 211 (293)
T ss_pred ccCCceEEEe--c---CcchHHHHHHHHHhc------CCceEEEEEeCCCCcCCccHHHHHHHHhcCccccEEEEEecCC
Confidence 3467777653 3 345777777777532 222222 444334456665555444333221000
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccccc
Q 018632 109 KDFFRTLYSFIYLLGTHLKPHVAILNGVTM 138 (353)
Q Consensus 109 ~~~~~~~~~l~~~l~~~~kpvIaav~G~a~ 138 (353)
...-....+++.. ...+||||+.+-|.+.
T Consensus 212 G~aEe~AA~~i~~-~~~~KPVVa~iaG~ta 240 (293)
T COG0074 212 GPAEEEAAEYIKA-NATRKPVVAYIAGRTA 240 (293)
T ss_pred CcHHHHHHHHHHH-hccCCCEEEEEeccCC
Confidence 0001112223333 3355999999999865
No 174
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=20.76 E-value=2e+02 Score=26.09 Aligned_cols=85 Identities=11% Similarity=-0.056 Sum_probs=46.1
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCChhhHHHHHHH
Q 018632 180 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 258 (353)
Q Consensus 180 r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
+.+... |.++-+-.+.++..+.. +. ++ .+ ++...+|.++..+|+.++................
T Consensus 164 ~~~~a~eA~~~Glv~~vv~~~~~~----~~------~~---a~---~l~~~~p~a~~~~K~~~~~~~~~~~~~~~~e~~~ 227 (255)
T PRK07112 164 QPVTAQQAFSWGLVDAYGANSDTL----LR------KH---LL---RLRCLNKAAVARYKSYASTLDDTVAAARPAALAA 227 (255)
T ss_pred CcccHHHHHHcCCCceecCcHHHH----HH------HH---HH---HHHhCCHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 444555 77776666766644421 11 11 22 2345578888888887765422222233333445
Q ss_pred HHHhcCcC-CHHHHHHHHHhccC
Q 018632 259 VDKCFGLD-TVEEIIDSLESEAS 280 (353)
Q Consensus 259 ~~~~~~~~-~~~~i~~~l~~~~~ 280 (353)
...++..+ ..+.+-++++++.+
T Consensus 228 ~~~~~~~~~~~eg~~af~~kr~p 250 (255)
T PRK07112 228 NIEMFADPENLRKIARYVETGKF 250 (255)
T ss_pred HHHHHcChHHHHHHHHHHcCCCC
Confidence 56677554 45555566666644
No 175
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=20.70 E-value=1.7e+02 Score=28.87 Aligned_cols=37 Identities=22% Similarity=0.421 Sum_probs=25.2
Q ss_pred cccCcchhhHHHhhhcCChHHHHHHHHHHHHHHHHHh
Q 018632 87 FCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 123 (353)
Q Consensus 87 F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 123 (353)
||.|+||..+......-.......|+.++...+..+.
T Consensus 90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6999999998775433445556667766666555554
No 176
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=20.47 E-value=2.6e+02 Score=25.73 Aligned_cols=87 Identities=7% Similarity=0.003 Sum_probs=53.8
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHHhhhcCCHHHHHHHHHHhhcccCCC-hhhHHHHHH
Q 018632 180 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 257 (353)
Q Consensus 180 r~~g~~-a~~l~ltG~~~~a~eA~~~Glv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 257 (353)
+.+... |.++.|-.+.++.++..+ ...+.+..+ +..+|.++..+|+.++...... .........
T Consensus 183 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~ 248 (277)
T PRK08258 183 RSMSAEEGERWGFFNRLVEPEELLA-----------EAQALARRL---AAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQ 248 (277)
T ss_pred CCCCHHHHHHcCCCcEecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhccCCHHHHHHHHHH
Confidence 445555 777777777777666543 233445444 5568999999999887654332 333344455
Q ss_pred HHHHhcCcC-CHHHHHHHHHhccC
Q 018632 258 IVDKCFGLD-TVEEIIDSLESEAS 280 (353)
Q Consensus 258 ~~~~~~~~~-~~~~i~~~l~~~~~ 280 (353)
....++..+ ..+.+.++++++.+
T Consensus 249 ~~~~~~~s~d~~eg~~af~ekr~p 272 (277)
T PRK08258 249 AQAICMQTEDFRRAYEAFVAKRKP 272 (277)
T ss_pred HHHHHhcCchHHHHHHHHhcCCCC
Confidence 677777655 45555566777654
Done!