Query 018642
Match_columns 352
No_of_seqs 162 out of 1493
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 03:49:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 3.1E-80 1.1E-84 636.3 27.7 326 1-347 191-521 (546)
2 1kp8_A Groel protein; chaperon 100.0 7.7E-79 2.6E-83 626.7 31.0 327 1-347 192-523 (547)
3 1iok_A Chaperonin 60; chaperon 100.0 8.2E-79 2.8E-83 626.5 28.2 328 1-347 193-525 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 6.2E-78 2.1E-82 620.0 31.3 328 1-347 191-525 (543)
5 3p9d_C T-complex protein 1 sub 100.0 1.4E-63 4.9E-68 516.9 19.0 310 3-348 219-587 (590)
6 3iyg_E T-complex protein 1 sub 100.0 1.2E-60 4.2E-65 489.3 27.0 279 1-346 206-514 (515)
7 3iyg_H T-complex protein 1 sub 100.0 3E-60 1E-64 486.2 28.2 278 1-348 205-515 (515)
8 3aq1_B Thermosome subunit; gro 100.0 3.1E-60 1.1E-64 484.7 26.1 274 1-347 170-476 (500)
9 3iyg_B T-complex protein 1 sub 100.0 6.4E-60 2.2E-64 483.7 27.9 273 1-347 205-511 (513)
10 3p9d_A T-complex protein 1 sub 100.0 4.4E-60 1.5E-64 489.1 21.0 275 1-346 222-547 (559)
11 3ruv_A Chaperonin, CPN; double 100.0 1.5E-59 5.3E-64 483.7 24.4 274 1-347 212-519 (543)
12 3p9d_E T-complex protein 1 sub 100.0 5.3E-60 1.8E-64 488.8 20.7 281 1-348 243-559 (562)
13 3iyg_Z T-complex protein 1 sub 100.0 4E-59 1.4E-63 478.2 26.6 273 1-346 202-516 (517)
14 1q3q_A Thermosome alpha subuni 100.0 1.6E-59 5.5E-64 484.0 23.4 274 1-347 219-525 (548)
15 1a6d_A Thermosome (alpha subun 100.0 1.8E-59 6.2E-64 483.4 23.3 274 1-347 216-522 (545)
16 3ko1_A Chaperonin; 9-fold symm 100.0 2.2E-59 7.4E-64 483.2 23.5 274 1-347 226-533 (553)
17 1a6d_B Thermosome (beta subuni 100.0 2.3E-59 7.7E-64 482.6 23.4 274 1-347 217-523 (543)
18 3p9d_D T-complex protein 1 sub 100.0 1.2E-59 3.9E-64 483.2 20.4 277 1-346 213-527 (528)
19 3iyg_D T-complex protein 1 sub 100.0 1.5E-58 5.2E-63 474.0 26.4 273 1-346 206-517 (518)
20 3iyg_A T-complex protein 1 sub 100.0 1.1E-58 3.9E-63 476.0 25.5 275 1-346 208-527 (529)
21 3iyg_G T-complex protein 1 sub 100.0 3.1E-58 1.1E-62 471.4 27.8 276 1-347 206-514 (515)
22 3iyg_Q T-complex protein 1 sub 100.0 8.7E-58 3E-62 467.9 27.0 280 1-346 205-511 (512)
23 3p9d_F T-complex protein 1 sub 100.0 7.8E-59 2.7E-63 478.8 17.7 275 1-348 213-538 (546)
24 3p9d_B T-complex protein 1 sub 100.0 4.9E-59 1.7E-63 478.6 13.8 273 1-347 212-518 (527)
25 3p9d_G T-complex protein 1 sub 100.0 1.6E-58 5.4E-63 476.7 17.5 279 1-347 218-527 (550)
26 3p9d_H T-complex protein 1 sub 100.0 6.5E-57 2.2E-61 466.2 6.6 266 17-347 234-548 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.4E-55 4.7E-60 392.2 12.8 183 1-201 8-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 2.6E-55 9.1E-60 391.3 13.7 182 1-200 15-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 8.6E-44 2.9E-48 303.2 11.4 139 1-157 2-144 (145)
30 1gml_A T-complex protein 1 sub 99.8 2.5E-19 8.4E-24 159.6 11.0 141 3-209 6-174 (178)
31 1ass_A Thermosome; chaperonin, 99.7 8.4E-17 2.9E-21 140.8 10.1 128 5-161 2-154 (159)
32 3v7e_A Ribosome-associated pro 30.5 56 0.0019 24.1 4.1 23 49-71 23-45 (82)
33 3iyg_E T-complex protein 1 sub 28.7 33 0.0011 34.3 3.3 33 3-35 202-234 (515)
34 3s6g_A N-acetylglutamate kinas 24.9 1.6E+02 0.0054 29.1 7.4 57 189-248 47-108 (460)
35 2bty_A Acetylglutamate kinase; 24.1 2.8E+02 0.0096 24.8 8.6 54 191-248 16-73 (282)
36 3swy_A Cyclic nucleotide-gated 21.1 1.2E+02 0.004 20.4 3.8 32 164-195 3-43 (46)
37 2ap9_A NAG kinase, acetylgluta 21.1 3.2E+02 0.011 24.7 8.4 55 190-248 19-77 (299)
38 2buf_A Acetylglutamate kinase; 20.5 2.7E+02 0.0091 25.4 7.6 54 191-248 21-78 (300)
39 2v5h_A Acetylglutamate kinase; 20.3 1.6E+02 0.0055 27.3 6.1 50 190-243 43-96 (321)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.1e-80 Score=636.26 Aligned_cols=326 Identities=33% Similarity=0.496 Sum_probs=311.4
Q ss_pred CeecceecccccccC-cCceeEeeCceeeeecCCCCCHHHHHHHHhhcccccCCCcEEEEecCchhhhhhhhhhcccccc
Q 018642 1 MKLNWGSMSRYFLYE-EDQTLDLKNPFILIHENKILDKNIFAQAIGAISCNEVKRPLLVVANDVEEEVAGFVVTNETFSK 79 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~~~~~l~~~~il~~d~~i~~~~~i~~~l~~~~~~~~~~pllii~~~i~~~al~~l~~n~~~~~ 79 (352)
|+||+||+||||+|+ ++|+.+++||+||++|++|+++++++|++++ +.+.|+||||++++|+++||++|+.|+++|.
T Consensus 191 m~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~--I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~ 268 (546)
T 3rtk_A 191 MRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEK--VIGAGKPLLIIAEDVEGEALSTLVVNKIRGT 268 (546)
T ss_dssp EEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHH--HHTTTCCEEEEESEECHHHHHHHHHHHHHSS
T ss_pred EEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHH--HHhcCCCEEEEcCCCCHHHHHHHHHhCCCCc
Confidence 689999999999999 8999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC---CCCCCCCceeecEEEEecceEEEEc
Q 018642 80 TKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN---SLYIPLMLGSCKKVKVTNNEMIIHG 156 (352)
Q Consensus 80 ~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~---~~~~~~~LG~a~~v~v~~~~~~~i~ 156 (352)
+++++||+|+|++ .|+++|+|||++|||+++++..| +++++++||+|++|++++++|+++.
T Consensus 269 ~~v~aVk~~~~~~----------------~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~ 332 (546)
T 3rtk_A 269 FKSVAVKAPGFGD----------------RRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVE 332 (546)
T ss_dssp CCEEEEECSSCHH----------------HHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEE
T ss_pred eEEEEeccccccc----------------cchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEc
Confidence 9999999999999 99999999999999999996543 8899999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 018642 157 GSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEGIIPG 236 (352)
Q Consensus 157 ~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~gvVpG 236 (352)
+|++++.+..||++|+++++.++++|++++|+||+++|+|++|||+|||+|+.+++|+||+++||||++|+++++|+|||
T Consensus 333 g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpG 412 (546)
T 3rtk_A 333 GAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAG 412 (546)
T ss_dssp ECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEET
T ss_pred CCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHccCCCCeeeeCCCCcccchhhCCc
Q 018642 237 GGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAI 315 (352)
Q Consensus 237 GGaael~~s~~L~~~~~~~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~~~~~~~~G~d~~~g~~~dm~~~GI 315 (352)
||++|+++|.+|++++ .++++|+|+++|++||++||++||+|||+|+. ++++|++. ..++|||+.+|+++||++.||
T Consensus 413 GGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI 490 (546)
T 3rtk_A 413 GGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGV 490 (546)
T ss_dssp TTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTC
T ss_pred CcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCC
Confidence 9999999999999987 78999999999999999999999999999999 99999986 356999999999999999999
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 316 VDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 316 iDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
||| ++||+++|++|+++|++||.+|++|...
T Consensus 491 ~dp-~~vk~~al~~A~e~A~~iL~id~iI~~~ 521 (546)
T 3rtk_A 491 ADP-VKVTRSALQNAASIAGLFLTTEAVVADK 521 (546)
T ss_dssp EEE-HHHHHHHHHHHHHHHHHHHHCC------
T ss_pred Eec-HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999 9999999999999999999999998754
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=7.7e-79 Score=626.67 Aligned_cols=327 Identities=33% Similarity=0.522 Sum_probs=316.5
Q ss_pred CeecceecccccccC-cCceeEeeCceeeeecCCCCCHHHHHHHHhhcccccCCCcEEEEecCchhhhhhhhhhcccccc
Q 018642 1 MKLNWGSMSRYFLYE-EDQTLDLKNPFILIHENKILDKNIFAQAIGAISCNEVKRPLLVVANDVEEEVAGFVVTNETFSK 79 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~~~~~l~~~~il~~d~~i~~~~~i~~~l~~~~~~~~~~pllii~~~i~~~al~~l~~n~~~~~ 79 (352)
|+||+||+||||+++ ++|+.+++||+||++|++|+++++++|+|+. +.+.|+||||++++|+++||++|+.|++++.
T Consensus 192 ~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~--i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~ 269 (547)
T 1kp8_A 192 MQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEA--VAKAGKPLLIIAEDVEGEALATLVVNTMRGI 269 (547)
T ss_dssp EEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHH--HHGGGCCEEEEESEECHHHHHHHHHHGGGTS
T ss_pred EEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHH--HHhcCCCEEEECCCcCHHHHHHHHhcccccc
Confidence 689999999999999 8899999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC---CCCCCCCceeecEEEEecceEEEEc
Q 018642 80 TKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN---SLYIPLMLGSCKKVKVTNNEMIIHG 156 (352)
Q Consensus 80 ~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~---~~~~~~~LG~a~~v~v~~~~~~~i~ 156 (352)
++|+|||+|+||+ +|+++|+|||++|||+++++..| +++++++||+|++|++++++|++++
T Consensus 270 ~~v~aVk~~~~~~----------------~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~ 333 (547)
T 1kp8_A 270 VKVAAVKAPGFGD----------------RRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID 333 (547)
T ss_dssp SCEEEEECSSCHH----------------HHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEE
T ss_pred eeEEEEecccccc----------------ccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEc
Confidence 9999999999999 99999999999999999998433 8999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 018642 157 GSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEGIIPG 236 (352)
Q Consensus 157 ~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~gvVpG 236 (352)
||++++.++.||++|+.+++.++++|+|++|+||+++|+|++|||+|||+|+.+++|+||++|||||++|+++++|+|||
T Consensus 334 g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpG 413 (547)
T 1kp8_A 334 GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAG 413 (547)
T ss_dssp ECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEET
T ss_pred CCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHccCCCCeeeeCCCCcccchhhCCc
Q 018642 237 GGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAI 315 (352)
Q Consensus 237 GGaael~~s~~L~~~~~~~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~~~~~~~~G~d~~~g~~~dm~~~GI 315 (352)
||++|++++.+|++++..++++|+|+++|++||+.||++||+|||+|+. ++++|++. +.++|||+.+|+++||++.||
T Consensus 414 GGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI 492 (547)
T 1kp8_A 414 GGVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGI 492 (547)
T ss_dssp TTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTC
T ss_pred CcHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCc
Confidence 9999999999999987568899999999999999999999999999999 99999976 468999999999999999999
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 316 VDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 316 iDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
||| ++||+++|++|+++|++||.+|++|...
T Consensus 493 ~Dp-~~vk~~al~~A~~~A~~iL~id~iI~~~ 523 (547)
T 1kp8_A 493 LDP-TKVTRSALQYAASVAGLMITTECMVTDL 523 (547)
T ss_dssp EEE-HHHHHHHHHHHHHHHHHHHTEEEEEEEC
T ss_pred eec-hHhHHHHHHHHHHHHHHHHhHhheeecC
Confidence 999 9999999999999999999999988653
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=8.2e-79 Score=626.54 Aligned_cols=328 Identities=33% Similarity=0.553 Sum_probs=280.4
Q ss_pred CeecceecccccccC-cCceeEeeCceeeeecCCCCCHHHHHHHHhhcccccCCCcEEEEecCchhhhhhhhhhcccccc
Q 018642 1 MKLNWGSMSRYFLYE-EDQTLDLKNPFILIHENKILDKNIFAQAIGAISCNEVKRPLLVVANDVEEEVAGFVVTNETFSK 79 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~~~~~l~~~~il~~d~~i~~~~~i~~~l~~~~~~~~~~pllii~~~i~~~al~~l~~n~~~~~ 79 (352)
|+||+||+||||+++ ++|+.+++||+||++|++|+++++++|+|+. +.+.|+||||++++|+++||++|+.|++++.
T Consensus 193 ~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~--i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~ 270 (545)
T 1iok_A 193 MQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLES--VIQSQKPLLIVAEDVEGEALATLVVNKLRGG 270 (545)
T ss_dssp EECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-------------CCCCEEEESCBC---------------
T ss_pred EEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHH--HHhcCCCEEEECCCcCHHHHHHHHHcccccc
Confidence 689999999999999 8899999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC---CCCCCCCceeecEEEEecceEEEEc
Q 018642 80 TKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN---SLYIPLMLGSCKKVKVTNNEMIIHG 156 (352)
Q Consensus 80 ~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~---~~~~~~~LG~a~~v~v~~~~~~~i~ 156 (352)
++++|||+|+||+ +|+++|+|||++|||+++++..| +++++++||+|++|++++++|++++
T Consensus 271 ~~v~aVk~~~~~~----------------~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~ 334 (545)
T 1iok_A 271 LKIAAVKAPGFGD----------------RRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVD 334 (545)
T ss_dssp --CEEEECSCCTT----------------HHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEES
T ss_pred ceeEEEecchhhh----------------ccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEe
Confidence 9999999999999 99999999999999999998433 8999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 018642 157 GSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEGIIPG 236 (352)
Q Consensus 157 ~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~gvVpG 236 (352)
||++++.+++||++++++++.++++|+|++|+||+++|+|++|||+|||+|+.+++|+||++|||||++|+++++|+|||
T Consensus 335 g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpG 414 (545)
T 1iok_A 335 GAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVG 414 (545)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEET
T ss_pred CCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHccCCCCeeeeCCCCcccchhhCCc
Q 018642 237 GGVALLHASEELEKLPAMNIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQENPDLEYDPPRDEYVDAVKSAI 315 (352)
Q Consensus 237 GGaael~~s~~L~~~~~~~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~~~~~~~~G~d~~~g~~~dm~~~GI 315 (352)
||++|++++.+|++++..++++|+|+++|++||+.||++||+|||+|+. ++++|++.+++++|||+.+|+++||++.||
T Consensus 415 GGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI 494 (545)
T 1iok_A 415 GGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGV 494 (545)
T ss_dssp TTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTC
T ss_pred chHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCc
Confidence 9999999999999987568899999999999999999999999999999 999999876678999999999999999999
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 316 VDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 316 iDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
||| ++||+++|++|+++|++||.+|++|...
T Consensus 495 ~dp-~~vk~~al~~A~~~A~~iL~id~iI~~~ 525 (545)
T 1iok_A 495 IDP-AKVVRTALEDAASVAGLLITTEAMIAEK 525 (545)
T ss_dssp EEE-HHHHHHHHHHHHHHHHHHHTEEEEEEEC
T ss_pred EEc-cHHHHHHHHHHHHHHHHHHhHHHhhccC
Confidence 999 9999999999999999999999988653
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=6.2e-78 Score=620.04 Aligned_cols=328 Identities=34% Similarity=0.547 Sum_probs=316.7
Q ss_pred CeecceecccccccC-cCceeEeeCceeeeecCCCCCHHHHHHHHhhcccccCCCcEEEEecCchhhhhhhhhhcccccc
Q 018642 1 MKLNWGSMSRYFLYE-EDQTLDLKNPFILIHENKILDKNIFAQAIGAISCNEVKRPLLVVANDVEEEVAGFVVTNETFSK 79 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~~~~~l~~~~il~~d~~i~~~~~i~~~l~~~~~~~~~~pllii~~~i~~~al~~l~~n~~~~~ 79 (352)
|+||+||++|||+++ ++|+.+++||+||++|++|+++++++|+|+. +.+.|+||||++++|+++|+++|+.|++++.
T Consensus 191 ~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~--i~~~g~~lvii~~~I~~~Al~~L~~n~irg~ 268 (543)
T 1we3_A 191 YQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ--VAQTGKPLLIIAEDVEGEALATLVVNKLRGT 268 (543)
T ss_dssp EEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHH--HHTTTCCEEEEESCBCHHHHHHHHHHHHHTS
T ss_pred EEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHH--HHhcCCCEEEEcCCccHHHHHHHHHhccccc
Confidence 689999999999999 8899999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC---CCCCCCCceeecEEEEecceEEEEc
Q 018642 80 TKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN---SLYIPLMLGSCKKVKVTNNEMIIHG 156 (352)
Q Consensus 80 ~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~---~~~~~~~LG~a~~v~v~~~~~~~i~ 156 (352)
++++|||+|+||+ +|+++|+|||++|||+++++..| +++++++||+|++|+++++++++++
T Consensus 269 ~~v~aVk~~~~~~----------------~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~ 332 (543)
T 1we3_A 269 LSVAAVKAPGFGD----------------RRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVG 332 (543)
T ss_dssp CCEEEEECSSSHH----------------HHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEE
T ss_pred eeEEEEeccchhh----------------hhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEc
Confidence 9999999999999 99999999999999999998433 8899999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 018642 157 GSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEGIIPG 236 (352)
Q Consensus 157 ~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~gvVpG 236 (352)
||++++.++.||++|+.+++.++++|++++|+||+++|+|++|||+|||+|+.+++|+||++|||||++|+++++|+|||
T Consensus 333 g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpG 412 (543)
T 1we3_A 333 GKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPG 412 (543)
T ss_dssp ECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEET
T ss_pred CCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHcc-CCCCeeeeCCCCcccchhhC
Q 018642 237 GGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQ-ENPDLEYDPPRDEYVDAVKS 313 (352)
Q Consensus 237 GGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~~~-~~~~~G~d~~~g~~~dm~~~ 313 (352)
||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++++|++. +++++|||+.+|+++||++.
T Consensus 413 GGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~ 492 (543)
T 1we3_A 413 GGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEA 492 (543)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTT
T ss_pred ccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccC
Confidence 999999999999998765 8999999999999999999999999999999 99999975 35689999999999999999
Q ss_pred CcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 314 AIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 314 GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
||||| ++||+++|++|+++|++||.+|++|...
T Consensus 493 gI~dp-~~vk~~al~~A~e~a~~iL~id~iI~~~ 525 (543)
T 1we3_A 493 GIVDP-AKVTRSALQNAASIGALILTTEAVVAEK 525 (543)
T ss_dssp TCEEE-HHHHHHHHHHHHHHHHHHHTEEEEEEEC
T ss_pred CcCcc-HHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999 9999999999999999999999988653
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.4e-63 Score=516.86 Aligned_cols=310 Identities=14% Similarity=0.176 Sum_probs=249.3
Q ss_pred ecceecccccccCcCceeEeeCceeeeecCC-------------CCCHHHHHHHHhh--------cc-cccCCCcEEEEe
Q 018642 3 LNWGSMSRYFLYEEDQTLDLKNPFILIHENK-------------ILDKNIFAQAIGA--------IS-CNEVKRPLLVVA 60 (352)
Q Consensus 3 ~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~-------------i~~~~~i~~~l~~--------~~-~~~~~~pllii~ 60 (352)
+-+|++.++.+++++|+.+++||+||++|++ |++++++.|+++. ++ +.+.| |+||++
T Consensus 219 lv~Gmvfdk~~~~~~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g-~~vII~ 297 (590)
T 3p9d_C 219 VLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVR-PTLVIT 297 (590)
T ss_dssp CCSSEEECCCCSCTTSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTC-CSEECC
T ss_pred eeeEEEEecccCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEe
Confidence 4567777777778789999999999999994 4567788887742 12 77765 777777
Q ss_pred cC-chhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCCCCc
Q 018642 61 ND-VEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIPLML 139 (352)
Q Consensus 61 ~~-i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~~~L 139 (352)
++ |+++|+++|..|++ ++++. .|+.+|+|||++|||+++++. +++++++|
T Consensus 298 e~~I~d~Al~~L~k~~I------~av~~---------------------~~k~~le~ia~~TGa~iis~l--~~~~~~~L 348 (590)
T 3p9d_C 298 EKGVSDLAQHYLLKGGC------SVLRR---------------------VKKSDNNRIARVTGATIVNRV--EDLKESDV 348 (590)
T ss_dssp SSCCCTHHHHHHHHTTC------CCCCC---------------------CCHHHHHHHHHHHTCCCCSCS--TTCCTTSC
T ss_pred cCCcCHHHHHHHHhccc------eeecc---------------------CCHHHHHHHHHHhCCceeecc--cCCCHHHh
Confidence 75 99999999998764 45554 778889999999999999998 99999999
Q ss_pred ee-ecEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHHhhccCHHHHHHHHH
Q 018642 140 GS-CKKVK---VTNNEMIIHGGSGNQVY--------------------------IEDRCEQLSDAIEMSTSDYEIKLLEE 189 (352)
Q Consensus 140 G~-a~~v~---v~~~~~~~i~~~~~~~~--------------------------i~~ri~~l~~~~~~~~~~~e~~~L~e 189 (352)
|+ |++|+ +++++|+++.||+++.. ++.|+++|+.+++.++++|+++
T Consensus 349 G~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~---- 424 (590)
T 3p9d_C 349 GTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH---- 424 (590)
T ss_dssp BCCCSEEECCEETTEECEEECC----------------------------------------------------------
T ss_pred CCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH----
Confidence 99 99996 57899999999999988 9999999999999999999966
Q ss_pred HHHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHH
Q 018642 190 RLQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQH 267 (352)
Q Consensus 190 Rl~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~ 267 (352)
+++|+||+|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++
T Consensus 425 -~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ 503 (590)
T 3p9d_C 425 -HHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVAD 503 (590)
T ss_dssp ----CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHH
T ss_pred -HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999995 9999999999999999998654 8899999999999
Q ss_pred HHHHHHHHHHHhcCCCHH-HHHHHHcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhH
Q 018642 268 AVKMPLYTIASTAGFQVS-VVEKLLGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEK 343 (352)
Q Consensus 268 AL~~pp~~La~NAG~d~~-vv~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~ 343 (352)
||+.||++||+|||+|+. ++.+|++. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++
T Consensus 504 ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp-~~vk~~al~~A~e~a~~iL~id~i 582 (590)
T 3p9d_C 504 AMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEP-EVIKQQSVKTAIESACLLLRVDDI 582 (590)
T ss_dssp HTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEE-HHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 99999874 4568999999999999999999999 999999999999999999999998
Q ss_pred hhccC
Q 018642 344 LQRQK 348 (352)
Q Consensus 344 i~~~~ 348 (352)
|...+
T Consensus 583 i~~~~ 587 (590)
T 3p9d_C 583 VSGVR 587 (590)
T ss_dssp ECCCC
T ss_pred HhcCC
Confidence 86543
No 6
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-60 Score=489.26 Aligned_cols=279 Identities=18% Similarity=0.195 Sum_probs=255.3
Q ss_pred CeecceecccccccC-cC-ceeEeeCceeee-----ecCCCCCHHHH-----------HHHHhhcccccCCCcEEEEecC
Q 018642 1 MKLNWGSMSRYFLYE-ED-QTLDLKNPFILI-----HENKILDKNIF-----------AQAIGAISCNEVKRPLLVVAND 62 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~-~~~~l~~~~il~-----~d~~i~~~~~i-----------~~~l~~~~~~~~~~pllii~~~ 62 (352)
|+||+||.||||.++ ++ +...|.+|+.+. ++.+|++++++ .|+++. +.+.|+||||++++
T Consensus 206 ~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lek--I~~~g~~vvi~~~~ 283 (515)
T 3iyg_E 206 VIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQ--IKETGANLAVCQWG 283 (515)
T ss_pred EEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHH--HHhcCCCEEEEeCC
Confidence 689999999999998 65 455778888877 56678998886 667787 99999999999999
Q ss_pred chhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCCCCceee
Q 018642 63 VEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIPLMLGSC 142 (352)
Q Consensus 63 i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~~~LG~a 142 (352)
|+++|+++|+.|++. ++++++ +.+|+|||++|||+++++. +++++++||+|
T Consensus 284 I~~~al~~L~~~~I~------~v~~v~---------------------k~~le~ia~~tGa~ii~~l--~~l~~~~LG~a 334 (515)
T 3iyg_E 284 FDDEANHLLLQNDLP------AVRWVG---------------------GPEIELIAIATGGRIVPRF--SELTAEKLGFA 334 (515)
T ss_pred CCHHHHHHHHHCCCE------EEeccC---------------------HHHHHHHHHHhCCEEeccc--ccCCHHHCCcc
Confidence 999999999999875 778754 4569999999999999999 99999999999
Q ss_pred cEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHHHHH
Q 018642 143 KKVKV-----TNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKKRKR 217 (352)
Q Consensus 143 ~~v~v-----~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~er~ 217 (352)
++|++ ++++++++.||+++ +.|||+|||+|+.+++|+||+
T Consensus 335 ~~v~~~~ig~~k~~~~~~~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~ 379 (515)
T 3iyg_E 335 GLVKEISFGTTKDKMLVIEQCKNS-----------------------------------RAVTIFIRGGNKMIIEEAKRS 379 (515)
T ss_pred eEEEEEEeccccceEEEEEcCCCC-----------------------------------ceEEEEEeCCcHHHHHHHHHH
Confidence 99987 45899999999873 468999999999999999999
Q ss_pred HHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHcc-
Q 018642 218 ATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQ- 293 (352)
Q Consensus 218 i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~~~- 293 (352)
++||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.+|++.
T Consensus 380 i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 459 (515)
T 3iyg_E 380 LHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQ 459 (515)
T ss_pred HHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999998766 8999999999999999999999999999999 99999863
Q ss_pred ---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhc
Q 018642 294 ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQR 346 (352)
Q Consensus 294 ---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~ 346 (352)
+++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|.+
T Consensus 460 ~~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 460 VKEVNPALGIDCLHKGTNDMKHQHVIET-LIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred hccCCCeeeEecCCCcccchHhccCEEc-HHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 3468999999999999999999999 999999999999999999999999875
No 7
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3e-60 Score=486.19 Aligned_cols=278 Identities=12% Similarity=0.192 Sum_probs=251.5
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecC-------------CCCCHHHH-----------HHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHEN-------------KILDKNIF-----------AQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~-------------~i~~~~~i-----------~~~l~~~~~~~~~~pl 56 (352)
|+||+||.||||+++ +.+++||+||++|+ +|++++++ .+.++. +.+.|+||
T Consensus 205 ~~~dk~~~~p~~~~~---p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~--I~~~g~~v 279 (515)
T 3iyg_H 205 VAFKKTFSYAGFEMQ---PKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEK--IHHSGAKV 279 (515)
T ss_pred eEEecCccCcccccC---CccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHhcCCcE
Confidence 689999999999865 33899999999999 47788887 555777 89999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCC
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIP 136 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~ 136 (352)
||++++|++.++++|..++ ++++++ .++.+|+|||++|||+++++. +++++
T Consensus 280 vi~~~~I~dla~~~l~~~g------I~~v~~---------------------~~k~~leria~~tGa~ii~~l--~~~~~ 330 (515)
T 3iyg_H 280 VLSKLPIGDVATQYFADRD------MFCAGR---------------------VPEEDLKRTMMACGGSIQTSV--NALSS 330 (515)
T ss_pred EEECCcccHHHHHHHHHcC------Cccccc---------------------ccHHHHHHHHHHhCCEEeecc--ccCCH
Confidence 9999999999999976443 345554 677889999999999999999 99999
Q ss_pred CCceeecEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHH
Q 018642 137 LMLGSCKKVKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRK 213 (352)
Q Consensus 137 ~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E 213 (352)
++||+|++|++. +++++++.+|+++ ++|||++||+|+.+++|
T Consensus 331 ~~LG~a~~v~~~~ig~~~~~~i~g~~~~-----------------------------------~~~tI~lrG~t~~~l~E 375 (515)
T 3iyg_H 331 DVLGRCQVFEETQIGGERYNFFTGCPKA-----------------------------------KTCTIILRGGAEQFMEE 375 (515)
T ss_pred HHCCcccEEEEEEEcCeEEEEEecCCCC-----------------------------------ceEEEEEeCCcHHHHHH
Confidence 999999999865 7899999998763 57999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHH
Q 018642 214 KRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKL 290 (352)
Q Consensus 214 ~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl 290 (352)
+||++|||||++|++++++ +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.+|
T Consensus 376 ~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 455 (515)
T 3iyg_H 376 TERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKL 455 (515)
T ss_pred HHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 9999999999999999985 9999999999999999998765 8999999999999999999999999999999 99999
Q ss_pred Hcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhccC
Q 018642 291 LGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQK 348 (352)
Q Consensus 291 ~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~~ 348 (352)
++. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|...+
T Consensus 456 ~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp-~~vk~~al~~A~~~a~~iL~iD~ii~~~~ 515 (515)
T 3iyg_H 456 RARHAQGGMWYGVDINTEDIADNFEAFVWEP-AMVRINALTAASEAACLIVSVDETIKNPR 515 (515)
T ss_pred HHHhhccCCCeeEeCCCCcccccHhccCEEC-HHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 875 3457999999999999999999999 99999999999999999999999998653
No 8
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.1e-60 Score=484.68 Aligned_cols=274 Identities=15% Similarity=0.221 Sum_probs=243.3
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCC-------------CCCHHHH-----------HHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENK-------------ILDKNIF-----------AQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~-------------i~~~~~i-----------~~~l~~~~~~~~~~pl 56 (352)
|.|++||.+||| +.+++||+||++|++ |++++++ .|.++. +.+.|+||
T Consensus 170 ~v~dk~~~~~~m------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~--I~~~g~~l 241 (500)
T 3aq1_B 170 LVIDKERSHPNM------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEK--VIASGANV 241 (500)
T ss_dssp EEESCCCSSTTS------CSEEEEEEEEEESSCBCC-------------------------CHHHHHHHH--HHTTCCSE
T ss_pred eEEeecCCCCCC------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHH--HHHhCcCE
Confidence 578899988877 558999999999998 7777776 888999 99999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCC
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIP 136 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~ 136 (352)
||++++|+++|+++|+.|+ ++||+. .++++|+|||++|||+++++. +++++
T Consensus 242 vi~~~~I~~~al~~L~~~~------I~av~~---------------------~~k~~le~ia~~tGa~iis~l--~~~~~ 292 (500)
T 3aq1_B 242 VFCQKGIDDMAQYYIEKAG------IYAVRR---------------------VKKSDLKRLSKVTGATIIQDL--DQITT 292 (500)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECS---------------------CCHHHHHHHHHHHCCCCBSCT--TCCCS
T ss_pred EEECCCcCHHHHHHHHHCC------EEEEEe---------------------CCHHHHHHHHHHhCCeEeccc--ccCCH
Confidence 9999999999999999877 468876 678889999999999999998 99999
Q ss_pred CCceeecEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHH
Q 018642 137 LMLGSCKKVKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRK 213 (352)
Q Consensus 137 ~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E 213 (352)
++||+|++|++. +++++++.+|++ +++|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEecCCcHHHHHH
Confidence 999999999875 889999999876 468999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHH
Q 018642 214 KRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKL 290 (352)
Q Consensus 214 ~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl 290 (352)
+||++|||||++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++++|
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 417 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVEL 417 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 9999999999999999999 9999999999999999998755 8899999999999999999999999999999 99999
Q ss_pred Hcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 291 LGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 291 ~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
++. +..++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 418 ~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~e~a~~iL~iD~iI~~~ 476 (500)
T 3aq1_B 418 RSQHEKGNKNAGLNVYTGEVVDMWENDVIEP-LRIKTQAINAAMEATVMILRIDDVVASK 476 (500)
T ss_dssp HHHHHTTCTTEEECTTTCCEEETTTTTCEEE-HHHHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHhcCCCCCeeEeCCCCCccchHhcCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 864 3458999999999999999999999 9999999999999999999999998763
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=6.4e-60 Score=483.69 Aligned_cols=273 Identities=16% Similarity=0.191 Sum_probs=250.1
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecC--------------CCCCHHHHHH-----------HHhhcccccCCCc
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHEN--------------KILDKNIFAQ-----------AIGAISCNEVKRP 55 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~--------------~i~~~~~i~~-----------~l~~~~~~~~~~p 55 (352)
|.||+||.+| |+.+++||+||++|+ +|++++++.+ .++. +.+.|+|
T Consensus 205 ~v~dk~~~~~-------m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~--I~~~g~~ 275 (513)
T 3iyg_B 205 FLLDKKIGVN-------QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVER--ILKHGIN 275 (513)
T ss_pred EEEeccccCC-------CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHH--HHhcCCC
Confidence 4677777655 788999999999999 5778888876 4666 8899999
Q ss_pred EEEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCC
Q 018642 56 LLVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYI 135 (352)
Q Consensus 56 llii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~ 135 (352)
|||++++|+++|+++|..+ +++|||+|++.+ |+|||++|||+++++. ++++
T Consensus 276 vvi~~~~I~~~al~~L~~~------~I~av~~~~~~~---------------------le~ia~~tGa~ii~~l--~~l~ 326 (513)
T 3iyg_B 276 CFINRQLIYNYPEQLFGAA------GVMAIEHADFVG---------------------VERLALVTGGEIASTF--DHPE 326 (513)
T ss_pred EEEEcCCccHHHHHHHHHc------CceEEecCCHHH---------------------HHHHHHHhCCEEeccc--ccCC
Confidence 9999999999999998864 468999998776 9999999999999999 8999
Q ss_pred CCCceeecEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHH
Q 018642 136 PLMLGSCKKVK---VTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESR 212 (352)
Q Consensus 136 ~~~LG~a~~v~---v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~ 212 (352)
+++||+|++|+ +++++++++.+|++ +++|||+|||+|+.+++
T Consensus 327 ~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~tI~lrG~t~~~l~ 371 (513)
T 3iyg_B 327 LVKLGSCKLIEEVMIGEDKLIHFSGVAL-----------------------------------GEACTIVLRGATQQILD 371 (513)
T ss_pred HhHCCcccEEEEEEECCeEEEEEecCCC-----------------------------------CceEEEEecCCCHHHHH
Confidence 99999999997 57889999999875 56899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc-CccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHH
Q 018642 213 KKRKRATNALNAAKAAMEE-GIIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEK 289 (352)
Q Consensus 213 E~er~i~DAl~a~k~a~~~-gvVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~k 289 (352)
|+||++|||||++|+++++ ++|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.+
T Consensus 372 E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 451 (513)
T 3iyg_B 372 EAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQ 451 (513)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 9999999999999999998 59999999999999999998765 8999999999999999999999999999999 9999
Q ss_pred HHcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 290 LLGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 290 l~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
|++. +++++|||+.+|++.||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 452 l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~~~a~~iL~id~ii~~~ 511 (513)
T 3iyg_B 452 LRAAHSEGKTTAGLDMKEGTIGDMSVLGITES-FQVKRQVLLSAAEAAEVILRVDNIIKAA 511 (513)
T ss_pred HHHHHhcCCCceeecCCCCCccchHhccCEec-HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9875 3568999999999999999999999 9999999999999999999999998753
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=4.4e-60 Score=489.15 Aligned_cols=275 Identities=19% Similarity=0.242 Sum_probs=250.8
Q ss_pred CeecceecccccccCcCceeEee--CceeeeecCCC-------------CCHHH-----------HHHHHhhcccccCCC
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLK--NPFILIHENKI-------------LDKNI-----------FAQAIGAISCNEVKR 54 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~--~~~il~~d~~i-------------~~~~~-----------i~~~l~~~~~~~~~~ 54 (352)
|.||+||.+|||. .+++ ||+||++|++| +++++ +.|+++. +.+.|+
T Consensus 222 ~v~dk~~~~~~m~------~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~--I~~~g~ 293 (559)
T 3p9d_A 222 YALNCTVASQAMP------KRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKK--IIDAGA 293 (559)
T ss_dssp ECCCCCCSSTTSC------SEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHH--HHTTCC
T ss_pred EEEeecccCCCcc------eeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHhhCC
Confidence 5789999999864 4777 99999999987 34444 6888888 999999
Q ss_pred cEEEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC---
Q 018642 55 PLLVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN--- 131 (352)
Q Consensus 55 pllii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~--- 131 (352)
||||++++|+++|+++|+.|++ ++|++ .++.+|+|||++|||+++++..+
T Consensus 294 ~lvI~~~~I~~~al~~L~~~~I------~av~~---------------------~~k~~le~ia~~TGa~iis~~~~l~~ 346 (559)
T 3p9d_A 294 QVVLTTKGIDDLCLKEFVEAKI------MGVRR---------------------CKKEDLRRIARATGATLVSSMSNLEG 346 (559)
T ss_dssp SEEEESSCCCGGGTHHHHHTTC------EEESS---------------------CCHHHHHHHHHHSSCCCBCCSCCSTT
T ss_pred CEEEEcCCCCHHHHHHHHHcCC------ceEcc---------------------CCHHHHHHHHHHhCCEEEeccccccc
Confidence 9999999999999999999985 68876 56777999999999999999843
Q ss_pred -CCCCCCCceeecEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcc
Q 018642 132 -SLYIPLMLGSCKKVK---VTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGAT 207 (352)
Q Consensus 132 -~~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~t 207 (352)
+++++++||+|++|+ +++++|+++.||++ +++|||+|||+|
T Consensus 347 ~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~tI~lrG~t 391 (559)
T 3p9d_A 347 EETFESSYLGLCDEVVQAKFSDDECILIKGTSK-----------------------------------HSSSSIILRGAN 391 (559)
T ss_dssp CCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-----------------------------------SCCCCEEEEESC
T ss_pred cccCCHhHCccceEEEEEEEcCceEEEEEcCCC-----------------------------------CCEEEEEEcCCC
Confidence 578899999999998 57999999999876 578999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Q 018642 208 TAESRKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS 285 (352)
Q Consensus 208 e~~l~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~ 285 (352)
+.+++|+||+++||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||++||++||+|||+|+.
T Consensus 392 e~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~ 471 (559)
T 3p9d_A 392 DYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSS 471 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Confidence 9999999999999999999999999 9999999999999999998765 8999999999999999999999999999999
Q ss_pred -HHHHHHcc---CCC------------CeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhc
Q 018642 286 -VVEKLLGQ---ENP------------DLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQR 346 (352)
Q Consensus 286 -vv~kl~~~---~~~------------~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~ 346 (352)
++.+|++. +++ ++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|..
T Consensus 472 ~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp-~~vk~~al~~A~e~a~~iL~id~ii~~ 547 (559)
T 3p9d_A 472 ELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEP-TISKVKSLKSALEACVAILRIDTMITV 547 (559)
T ss_dssp HHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEE-HHHHHHHHHHHHHHHHHHHTEEEEEEC
T ss_pred HHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEec-HHHHHHHHHHHHHHHHHHHhHHhhhhc
Confidence 99999874 233 7999999999999999999999 999999999999999999999999854
No 11
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.5e-59 Score=483.70 Aligned_cols=274 Identities=15% Similarity=0.227 Sum_probs=249.8
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecC-------------CCCCHHH-----------HHHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHEN-------------KILDKNI-----------FAQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~-------------~i~~~~~-----------i~~~l~~~~~~~~~~pl 56 (352)
|+||+||.+||| +.+++||+||++|+ +|+++++ +.+.++. +.+.|+||
T Consensus 212 ~v~dk~~~~~~m------~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~--I~~~g~~v 283 (543)
T 3ruv_A 212 VLVDKERVSAQM------PKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAE--IKASGANV 283 (543)
T ss_dssp EEESCCCSCTTS------CSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHH--HHHHTCSE
T ss_pred eEEeccccCccc------cccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHH--HHHcCCCE
Confidence 579999999986 55899999999999 4677776 5566677 88999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCC
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIP 136 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~ 136 (352)
||++++|+++|+++|..++ +++|++ +++++|+|||++|||+++++. +++++
T Consensus 284 vi~~~~I~~~al~~L~~~g------I~~v~~---------------------v~k~~le~ia~~tGa~iis~l--~~l~~ 334 (543)
T 3ruv_A 284 LFCQKGIDDLAQHYLAKEG------IVAARR---------------------VKKSDMEKLAKATGANVIAAI--AALSA 334 (543)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECS---------------------CCHHHHHHHHHHHCCCEESCG--GGCCG
T ss_pred EEEeCCccHHHHHHHHHcC------cEEEee---------------------CCHHHHHHHHHHhCCceeccc--ccCCH
Confidence 9999999999999998544 568887 567789999999999999998 89999
Q ss_pred CCceeecEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHH
Q 018642 137 LMLGSCKKVKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRK 213 (352)
Q Consensus 137 ~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E 213 (352)
++||+|++|++. +++++++.+|+++ ..|||+|||+|+.+++|
T Consensus 335 ~~LG~a~~v~~~~ig~~~~~~i~g~~~~-----------------------------------~~~TI~lrG~te~~l~E 379 (543)
T 3ruv_A 335 QDLGDAGLVEERKISGDSMIFVEECKHP-----------------------------------KAVTMLIRGTTEHVIEE 379 (543)
T ss_dssp GGCEEEEEEEEEEETTEEEEEEECCSSC-----------------------------------SSEEEEEEESSHHHHHH
T ss_pred HHCCcccEEEEEEeCCceEEEEECCCCC-----------------------------------ceeEEEecCCCHHHHHH
Confidence 999999999875 8899999999874 45899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHH
Q 018642 214 KRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKL 290 (352)
Q Consensus 214 ~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl 290 (352)
+||++|||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.+|
T Consensus 380 ~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 459 (543)
T 3ruv_A 380 VARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKV 459 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 9999999999999999999 9999999999999999998755 8999999999999999999999999999999 99999
Q ss_pred Hcc----CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 291 LGQ----ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 291 ~~~----~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
++. +++++|||+.+|++.||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 460 ~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp-~~vk~~al~~A~~~a~~iL~id~ii~~~ 519 (543)
T 3ruv_A 460 RAAHASNGNKCAGLNVFTGAVEDMCENGVVEP-LRVKTQAIQSAAESTEMLLRIDDVIAAE 519 (543)
T ss_dssp HHHHTTTCCTTEEECTTTCSEEETTTTTCEEE-HHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHhhcCCceeeeeCCCCccccHHHcCCEec-HHHHHHHHHHHHHHHHHHHhHHhheecC
Confidence 874 3468999999999999999999999 9999999999999999999999998754
No 12
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=5.3e-60 Score=488.76 Aligned_cols=281 Identities=16% Similarity=0.143 Sum_probs=249.1
Q ss_pred CeecceecccccccCcCce--------eEeeCceeeeec-----CCCCCHHH-----------HHHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQT--------LDLKNPFILIHE-----NKILDKNI-----------FAQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~--------~~l~~~~il~~d-----~~i~~~~~-----------i~~~l~~~~~~~~~~pl 56 (352)
|+||+||.+|||.++.+++ ..|++|+.+..+ .+|+++++ +.|.++. +.+.|+||
T Consensus 243 mv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lek--I~~~g~~v 320 (562)
T 3p9d_E 243 VILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDD--VKKAGADV 320 (562)
T ss_dssp EEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHH--HHHHTCSC
T ss_pred EEEecCCCCCCcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHH--HHHcCCcE
Confidence 6799999999998863122 234555554433 35667766 6788888 99999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCC
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIP 136 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~ 136 (352)
||++++|+++|+++|+.|++. +|++++..+ |+|||++|||+++++. +++++
T Consensus 321 vI~~~~I~~~Al~~L~~~~I~------~v~~v~k~~---------------------le~ia~~TGa~iis~l--~~l~~ 371 (562)
T 3p9d_E 321 VICQWGFDDEANHLLLQNDLP------AVRWVGGQE---------------------LEHIAISTNGRIVPRF--QDLSK 371 (562)
T ss_dssp CEECSSCCSHHHHHHHTTTCC------CEECCCTTT---------------------HHHHHHHHCCCEEESS--SCCCT
T ss_pred EEEeCCCCHHHHHHHHHCCCE------EEeccCHHH---------------------HHHHHHHhCCEEEecc--ccCCH
Confidence 999999999999999999975 788876655 9999999999999999 99999
Q ss_pred CCceeecEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHH
Q 018642 137 LMLGSCKKVKV-----TNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAES 211 (352)
Q Consensus 137 ~~LG~a~~v~v-----~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l 211 (352)
++||+|++|++ ++++++++.+|+++ ++|||+|||+|+.++
T Consensus 372 ~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~-----------------------------------~~~TIllrG~te~~l 416 (562)
T 3p9d_E 372 DKLGTCSRIYEQEFGTTKDRMLIIEQSKET-----------------------------------KTVTCFVRGSNKMIV 416 (562)
T ss_dssp TSCEECSCEEEECCSSSSCCEEEECCCSCC-----------------------------------SCCEEEEECTTTTTH
T ss_pred HHCCcceEEEEEEeccCCceEEEEecCCCC-----------------------------------CeEEEEEeCCCHHHH
Confidence 99999999998 46899999999873 468999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHH
Q 018642 212 RKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVE 288 (352)
Q Consensus 212 ~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~ 288 (352)
+|+||++|||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.
T Consensus 417 ~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~ 496 (562)
T 3p9d_E 417 DEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLS 496 (562)
T ss_dssp HHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 999999999999999999999 9999999999999999998765 8999999999999999999999999999999 999
Q ss_pred HHHcc----CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhccC
Q 018642 289 KLLGQ----ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQK 348 (352)
Q Consensus 289 kl~~~----~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~~ 348 (352)
+|++. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|.+.+
T Consensus 497 ~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp-~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 559 (562)
T 3p9d_E 497 TLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDP-FIGKKQQILLATQLCRMILKIDNVIISGK 559 (562)
T ss_dssp HHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEE-HHHHHHHHHHHHHHHHHHHTEEEEEECCC
T ss_pred HHHHHHhhcCCCceeEecCCCcccchHhccCEEc-HHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99863 3468999999999999999999999 99999999999999999999999988654
No 13
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4e-59 Score=478.15 Aligned_cols=273 Identities=15% Similarity=0.244 Sum_probs=241.4
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCCCC-------------CHHHHHH------------------HHhhccc
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENKIL-------------DKNIFAQ------------------AIGAISC 49 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~i~-------------~~~~i~~------------------~l~~~~~ 49 (352)
|.||+||.+|| |+.+++||+||++|++|+ +++++.+ +...+ +
T Consensus 202 ~v~dk~~~~p~------m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v-~ 274 (517)
T 3iyg_Z 202 LVLDHGARHPD------MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKV-C 274 (517)
T ss_pred EEEeccCCCCC------ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-h
Confidence 57889998886 677999999999999763 3333333 22220 2
Q ss_pred ccCCCcEEEEe-cCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeec
Q 018642 50 NEVKRPLLVVA-NDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTA 128 (352)
Q Consensus 50 ~~~~~pllii~-~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~ 128 (352)
.+.++|+||++ ++|+++|+++|..++ +++|++ .++.+|+|||++|||+++++
T Consensus 275 ~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v~~---------------------v~~~~leria~~tGa~iv~~ 327 (517)
T 3iyg_Z 275 GDSDKGFVVINQKGIDPFSLDALAKEG------IIALRR---------------------AKRRNMERLTLACGGIALNS 327 (517)
T ss_pred hccCCceEEEecccCCHHHHHHHHHCC------CEEEEe---------------------cCHHHHHHHHHHhCCEEecc
Confidence 34578999887 799999999998765 468887 44566999999999999999
Q ss_pred cCCCCCCCCC-ceeecEE---EEecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEc
Q 018642 129 ASNSLYIPLM-LGSCKKV---KVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVG 204 (352)
Q Consensus 129 ~~~~~~~~~~-LG~a~~v---~v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vg 204 (352)
. +++++++ ||+|+ | .+++++++++.+|+++ ..|||+||
T Consensus 328 l--~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lr 369 (517)
T 3iyg_Z 328 L--DDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNP-----------------------------------RSVTLLIK 369 (517)
T ss_pred h--hhCcccccCCcce-EEEEEEcCceEEEEeCCCCc-----------------------------------hhheeeec
Confidence 9 9999999 99999 9 5688999999999874 34899999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018642 205 GATTAESRKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGF 282 (352)
Q Consensus 205 G~te~~l~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~ 282 (352)
|+|+++++|+||++|||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+++|++||+|||+
T Consensus 370 G~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~ 449 (517)
T 3iyg_Z 370 GPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGF 449 (517)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999 9999999999999999999875 8999999999999999999999999999
Q ss_pred CHH-HHHHHHcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhc
Q 018642 283 QVS-VVEKLLGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQR 346 (352)
Q Consensus 283 d~~-vv~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~ 346 (352)
|+. ++.+|++. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+||+|++
T Consensus 450 d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 450 DLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDN-YCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeec-HHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999 99999875 3568999999999999999999999 999999999999999999999999875
No 14
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.6e-59 Score=484.02 Aligned_cols=274 Identities=16% Similarity=0.275 Sum_probs=254.1
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCC-------------CCCHHHH-----------HHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENK-------------ILDKNIF-----------AQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~-------------i~~~~~i-----------~~~l~~~~~~~~~~pl 56 (352)
|.||+||.+||| +.+++||+||++|++ |++++++ .|.++. +.+.|+||
T Consensus 219 ~v~dk~~~~~~m------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~--I~~~g~~l 290 (548)
T 1q3q_A 219 VVIDKEVVHPRM------PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDH--IAQTGANV 290 (548)
T ss_dssp EEESCCCSSTTS------CSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHH--HHHHTCCE
T ss_pred EEEeccCCCCCC------cceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHHhCcCE
Confidence 579999999987 347899999999999 8888886 788888 99999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCC
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIP 136 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~ 136 (352)
||++++|+++|+++|+.|+ ++||+. +++++|+|||++|||+++++. +++++
T Consensus 291 vi~~~~I~~~al~~L~~~~------I~av~~---------------------~~k~~le~ia~~tGa~ii~~l--~~~~~ 341 (548)
T 1q3q_A 291 VFVQKGIDDLAQHYLAKYG------IMAVRR---------------------VKKSDMEKLAKATGAKIVTNV--KDLTP 341 (548)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECS---------------------CCHHHHHHHHHHHCCCCBSSG--GGCCG
T ss_pred EEEcCCcCHHHHHHHHHCC------cEEEcc---------------------CCHHHHHHHHHHhCCeEeccc--ccCCH
Confidence 9999999999999999887 478876 678889999999999999998 99999
Q ss_pred CCceeecEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHH
Q 018642 137 LMLGSCKKVKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRK 213 (352)
Q Consensus 137 ~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E 213 (352)
++||+|++|++. +++++++.+|++ +++|||+|||+|+.+++|
T Consensus 342 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~te~~l~E 386 (548)
T 1q3q_A 342 EDLGYAEVVEERKLAGENMIFVEGCKN-----------------------------------PKAVTILIRGGTEHVIDE 386 (548)
T ss_dssp GGCEEESEEEEEEETTEEEEEEECCSS-----------------------------------CSSEEEEEEESSHHHHHH
T ss_pred HHCCCceEEEEEEecCceEEEEecCCC-----------------------------------CCeEEEEECCCChHHHHH
Confidence 999999999875 889999999876 468999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHH
Q 018642 214 KRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKL 290 (352)
Q Consensus 214 ~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl 290 (352)
+||++|||||++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++++|
T Consensus 387 ~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 466 (548)
T 1q3q_A 387 VERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKV 466 (548)
T ss_dssp HHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 9999999999999999999 9999999999999999998765 8899999999999999999999999999999 99999
Q ss_pred Hcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 291 LGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 291 ~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
++. +..++|||+.+|++.||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 467 ~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~e~a~~iL~iD~iI~~~ 525 (548)
T 1q3q_A 467 ISEHKNRGLGIGIDVFEGKPADMLEKGIIEP-LRVKKQAIKSASEAAIMILRIDDVIAAK 525 (548)
T ss_dssp HHHHHHHCTTEEEETTTTEEEETTTTTCEEE-HHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred HHHhhcCCCCcceeCCCCCccchhhcCCEec-HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 864 3468999999999999999999999 9999999999999999999999998763
No 15
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.8e-59 Score=483.36 Aligned_cols=274 Identities=18% Similarity=0.250 Sum_probs=251.9
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCC-------------CCCHHHH-----------HHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENK-------------ILDKNIF-----------AQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~-------------i~~~~~i-----------~~~l~~~~~~~~~~pl 56 (352)
|.||+||.+||| +..++||+||++|++ |++++++ .|.++. +.+.|+||
T Consensus 216 ~v~dk~~~~~~m------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~--I~~~g~~l 287 (545)
T 1a6d_A 216 IVIDKEKVHSKM------PDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEK--IKKSGANV 287 (545)
T ss_dssp EEESCCCSCTTS------CSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHH--HHHTTCCE
T ss_pred EEEeccCCCCCC------cceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHHhCCCE
Confidence 579999999987 356899999999999 7777776 788888 99999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCC
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIP 136 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~ 136 (352)
||++++|+++|+++|+.|+ ++||+. +++++|+|||++|||+++++. +++++
T Consensus 288 vi~~~~I~~~al~~L~~~~------I~av~~---------------------~~k~~le~ia~~tGa~iis~l--~~~~~ 338 (545)
T 1a6d_A 288 VLCQKGIDDVAQHYLAKEG------IYAVRR---------------------VKKSDMEKLAKATGAKIVTDL--DDLTP 338 (545)
T ss_dssp EEESSCBCHHHHHHHHHHT------CEEECS---------------------CCHHHHHHHHHHHCCCEESSG--GGCCG
T ss_pred EEECCCccHHHHHHHHHCC------eeEecc---------------------CCHHHHHHHHHHhCCeeeccc--ccCCH
Confidence 9999999999999999887 478876 677889999999999999998 99999
Q ss_pred CCceeecEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHH
Q 018642 137 LMLGSCKKVKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRK 213 (352)
Q Consensus 137 ~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E 213 (352)
++||+|++|++. +++++++.+|++ +++|||+|||+|+.+++|
T Consensus 339 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~te~~l~E 383 (545)
T 1a6d_A 339 SVLGEAETVEERKIGDDRMTFVMGCKN-----------------------------------PKAVSILIRGGTDHVVSE 383 (545)
T ss_dssp GGCEEEEEEEEEEETTEEEEEEEEESC-----------------------------------SSCEEEEECCSSSTTHHH
T ss_pred HHCCCceEEEEEEecCceEEEEecCCC-----------------------------------CceEEEEEcCCCHHHHHH
Confidence 999999999875 789999999876 468999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHH
Q 018642 214 KRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKL 290 (352)
Q Consensus 214 ~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl 290 (352)
+||++|||||++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.+|
T Consensus 384 ~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 463 (545)
T 1a6d_A 384 VERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKL 463 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 9999999999999999999 9999999999999999998755 8999999999999999999999999999999 99999
Q ss_pred Hcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 291 LGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 291 ~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
++. +..++|||+.+|++.||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 464 ~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~e~a~~iL~id~iI~~~ 522 (545)
T 1a6d_A 464 KADDEKGRISVGVDLDNNGVGDMKAKGVVDP-LRVKTHALESAVEVATMILRIDDVIASK 522 (545)
T ss_dssp HHHHHTTCTTEEEETTTTEEEEHHHHTCEEE-HHHHHHHHHHHHHHHHHHHTCCEEC---
T ss_pred HHHhhcCCCCcceecccCccccchhcCcccc-HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 864 3458999999999999999999999 9999999999999999999999988753
No 16
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.2e-59 Score=483.24 Aligned_cols=274 Identities=16% Similarity=0.234 Sum_probs=250.2
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecC-------------CCCCHHH-----------HHHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHEN-------------KILDKNI-----------FAQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~-------------~i~~~~~-----------i~~~l~~~~~~~~~~pl 56 (352)
|.||+||.+||| +.+++||+||++|+ +|+++++ +.+.++. +.+.|+||
T Consensus 226 ~v~dk~~~~~~m------~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vek--I~~~g~~v 297 (553)
T 3ko1_A 226 IVVDKEVVHPGM------PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDK--ILATGANV 297 (553)
T ss_dssp EEECSCBSCTTS------CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHH--HHTTCCSE
T ss_pred EEecccccCCCC------ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHhhcceE
Confidence 579999999976 55789999999999 5778887 4555677 89999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCC
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIP 136 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~ 136 (352)
||++++|+++|+++|..++ +++|++ .++++|+|||++|||+++++. +++++
T Consensus 298 vI~~~~I~~~al~~L~~~g------I~~v~~---------------------v~k~~leria~~tGa~ivs~l--~~l~~ 348 (553)
T 3ko1_A 298 IICQKGIDEVAQSYLAKKG------VLAVRR---------------------AKKSDLEKLARATGGRVVSNI--DEISE 348 (553)
T ss_dssp EECSSCBCSHHHHHHHHHT------CEEECC---------------------CCHHHHHHHHTTTTCCEESCG--GGCCS
T ss_pred EEeccChHHHHHHHHHhcc------hhhhhh---------------------hhhhhHHHHHHhhCCeeeccc--ccCCh
Confidence 9999999999999998654 468887 567789999999999999999 99999
Q ss_pred CCceeecEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHH
Q 018642 137 LMLGSCKKVKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRK 213 (352)
Q Consensus 137 ~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E 213 (352)
++||+|++|++. +++++|+.+|+++ ..|||+|||+|+++++|
T Consensus 349 ~~LG~a~~v~~~~ig~d~~~~i~g~~~~-----------------------------------~~~TI~lrG~te~~l~E 393 (553)
T 3ko1_A 349 QDLGYASLIEERKVGEDKMVFVEGAKNP-----------------------------------KSISILIRGGLERLVDE 393 (553)
T ss_dssp SSSEECSEEECCCCSSSCCEEEESCSSS-----------------------------------SCEEEEECCSSTTHHHH
T ss_pred hhcchHHHHHHhhcCcceEEEeccCCCC-----------------------------------ceEEEeeeccHHHHHHH
Confidence 999999999875 8899999999874 46899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHH
Q 018642 214 KRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKL 290 (352)
Q Consensus 214 ~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl 290 (352)
+||++|||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.+|
T Consensus 394 ~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 473 (553)
T 3ko1_A 394 TERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKL 473 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHH
Confidence 9999999999999999999 9999999999999999998765 8999999999999999999999999999999 99999
Q ss_pred HccC---C-CCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 291 LGQE---N-PDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 291 ~~~~---~-~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
++.+ + +++|||+.+|++.||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 474 ~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~e~a~~iL~iD~ii~~~ 533 (553)
T 3ko1_A 474 RSTHENENNKWYGIDLYAGQPVDMWQKGVIEP-ALVKMNAIKAATEAATLVLRIDDVVSAG 533 (553)
T ss_dssp HHTTCSGGGTTEEEETTTTEEEESGGGSCEEE-TTHHHHHHHHHHHHHHHHHHEEEECCC-
T ss_pred HHHhhCcCCceEeEEeecCCchHHHHhCccch-hhhhhhhhhhcchhheEEEehHHHHHhh
Confidence 8753 3 67999999999999999999999 9999999999999999999999998754
No 17
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.3e-59 Score=482.57 Aligned_cols=274 Identities=16% Similarity=0.246 Sum_probs=252.5
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCC-------------CCCHHHH-----------HHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENK-------------ILDKNIF-----------AQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~-------------i~~~~~i-----------~~~l~~~~~~~~~~pl 56 (352)
|.|++||.+||| +..++||+||++|++ |++++++ .|+++. +.+.|+||
T Consensus 217 ~v~dk~~~~~~m------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~--I~~~g~~l 288 (543)
T 1a6d_B 217 IIVDKEKVHPGM------PDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDK--IKSVGANV 288 (543)
T ss_dssp EEESCCCSSTTS------CSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHH--HHHTTCCE
T ss_pred EEEecCCCCCCC------cceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHHcCCCE
Confidence 578999999987 356899999999999 7778776 788888 99999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCC
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIP 136 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~ 136 (352)
||++++|+++|+++|+.|+ ++||+. .++++|+|||++|||+++++. +++++
T Consensus 289 vi~~~~I~~~al~~L~~~~------I~av~~---------------------v~k~~le~ia~~tGa~iis~l--~~l~~ 339 (543)
T 1a6d_B 289 VITQKGIDDMAQHYLSRAG------IYAVRR---------------------VKKSDMDKLAKATGASIVSTI--DEISS 339 (543)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEECS---------------------CCHHHHHHHHHHHTCCEESCG--GGCCG
T ss_pred EEECCCcCHHHHHHHHHCC------eeEecc---------------------CCHHHHHHHHHHhCCceeccc--ccCCH
Confidence 9999999999999999886 578876 677889999999999999998 89999
Q ss_pred CCceeecEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHH
Q 018642 137 LMLGSCKKVKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRK 213 (352)
Q Consensus 137 ~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E 213 (352)
++||+|++|++. +++++++.+|++ +++|||+|||+|+.+++|
T Consensus 340 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t~~~l~E 384 (543)
T 1a6d_B 340 SDLGTAERVEQVKVGEDYMTFVTGCKN-----------------------------------PKAVSILVRGETEHVVDE 384 (543)
T ss_dssp GGCEEEEEEEEEEETTEEEEEEEEESS-----------------------------------SSCEEEEEEESSHHHHHH
T ss_pred HHCCCceEEEEEEecCceEEEEecCCC-----------------------------------CceEEEEecCCCHHHHHH
Confidence 999999999874 889999999876 468999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHH
Q 018642 214 KRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKL 290 (352)
Q Consensus 214 ~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl 290 (352)
+||++|||||++|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.+|
T Consensus 385 ~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l 464 (543)
T 1a6d_B 385 MERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKL 464 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9999999999999999999 9999999999999999998754 8899999999999999999999999999999 99999
Q ss_pred Hcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 291 LGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 291 ~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
++. +..++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 465 ~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~e~a~~iL~id~iI~~~ 523 (543)
T 1a6d_B 465 RAEHAKGNKTYGINVFTGEIEDMVKNGVIEP-IRVGKQAIESATEAAIMILRIDDVIATK 523 (543)
T ss_dssp HHHHHTTCTTEEEETTTTEEEETTTTTCEEE-HHHHHHHHHHHHHHHHHHHHEEEEEC--
T ss_pred HHHHhCCCCCeeEeCCCCcccchhhcCceec-HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 864 3468999999999999999999999 9999999999999999999999988764
No 18
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1.2e-59 Score=483.20 Aligned_cols=277 Identities=15% Similarity=0.134 Sum_probs=252.4
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCCCC-------------CHHH-----------HHHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENKIL-------------DKNI-----------FAQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~i~-------------~~~~-----------i~~~l~~~~~~~~~~pl 56 (352)
|.||+||.|||| |+.+++||+||++|++|+ ++++ +.|+++. +.+.|+||
T Consensus 213 ~v~dk~~~~~~~-----m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~--I~~~g~~v 285 (528)
T 3p9d_D 213 VVLTQTAIKSAG-----GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKK--IKKAKCNV 285 (528)
T ss_dssp CBCCCCCCCSSS-----CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHH--HHHTTCCE
T ss_pred eEEeecccCccc-----CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHhcCCCE
Confidence 689999999998 788999999999999876 4443 7888888 99999999
Q ss_pred EEEecCc-----hhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC
Q 018642 57 LVVANDV-----EEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN 131 (352)
Q Consensus 57 lii~~~i-----~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~ 131 (352)
||++++| +++|+++|..|+ ++||+++ ++++|+|||++|||+++++.
T Consensus 286 vi~~~~I~~~a~~~~al~~L~~~~------I~av~~~---------------------~k~~le~ia~~tGa~ii~~~-- 336 (528)
T 3p9d_D 286 LLIQKSILRDAVNDLALHFLSKLN------IMVVKDI---------------------EREEIEFLSKGLGCKPIADI-- 336 (528)
T ss_dssp EEESSCSCTTSCSCHHHHHHTTTS------CCEEECC---------------------CTHHHHHHHHHHTCCCCSCS--
T ss_pred EEEeCCcccccCCHHHHHHHHHcC------cEEEEeC---------------------CHHHHHHHHHHHCCEEeccc--
Confidence 9999999 999999999876 4689875 45569999999999999999
Q ss_pred CCCCCCCceeecEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcch
Q 018642 132 SLYIPLMLGSCKKVKV---TNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATT 208 (352)
Q Consensus 132 ~~~~~~~LG~a~~v~v---~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te 208 (352)
+++++++||+|++|++ ++++++++.+|.... .+++|||+|||+|+
T Consensus 337 ~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~--------------------------------~~~~~tI~lrG~te 384 (528)
T 3p9d_D 337 ELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN--------------------------------ARPTVSVVIRGANN 384 (528)
T ss_dssp TTCCSSSEEEESCEECCEETTEECCBCTTBCCGG--------------------------------GCCCCEEECCCSST
T ss_pred ccCCHHHCCcccEEEEEEECCEEEEEEEcccccC--------------------------------CCceEEEEEcCCCH
Confidence 9999999999999975 466888888875311 15789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-
Q 018642 209 AESRKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS- 285 (352)
Q Consensus 209 ~~l~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~- 285 (352)
.+++|+||++|||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.
T Consensus 385 ~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~ 464 (528)
T 3p9d_D 385 MIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIK 464 (528)
T ss_dssp THHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 999999999999999999999999 9999999999999999999766 8999999999999999999999999999999
Q ss_pred HHHHHHcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhc
Q 018642 286 VVEKLLGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQR 346 (352)
Q Consensus 286 vv~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~ 346 (352)
++.+|++. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|.+
T Consensus 465 vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp-~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (528)
T 3p9d_D 465 VVTELRSKHENGELNDGISVRRSGTTNTYEEHILQP-VLVSTSAITLASECVKSILRIDDIAFS 527 (528)
T ss_dssp HHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEE-HHHHHHHHHHHHHHHHHHHHCSCCCBC
T ss_pred HHHHHHHHHhccCCccceecCCCCccchHhccCeec-HHHHHHHHHHHHHHHHHHHhhhHheec
Confidence 99999875 3568999999999999999999999 999999999999999999999999865
No 19
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-58 Score=474.00 Aligned_cols=273 Identities=15% Similarity=0.178 Sum_probs=243.4
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCC-------------CCCHH-----------HHHHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENK-------------ILDKN-----------IFAQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~-------------i~~~~-----------~i~~~l~~~~~~~~~~pl 56 (352)
|.||+||.+ +|+..++||+|++++++ |++++ .+.|.++. +.+.|+||
T Consensus 206 ~~~dk~~~~-------~mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~--I~~~g~~l 276 (518)
T 3iyg_D 206 LVLTQKVAN-------SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQ--IKKTGCNV 276 (518)
T ss_pred EEEeccccc-------CCCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHH--HHhcCCCE
Confidence 578888877 23334566666666664 45554 46788888 99999999
Q ss_pred EEE-----ecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC
Q 018642 57 LVV-----ANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN 131 (352)
Q Consensus 57 lii-----~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~ 131 (352)
||+ +++|+++|+++|..|+ ++|||+|++++ |+|||++|||+++++.
T Consensus 277 vi~~k~i~~~~I~~~Al~~L~~~~------I~av~~~~~~~---------------------le~ia~~tGa~ii~~l-- 327 (518)
T 3iyg_D 277 LLIQKSILRDALSDLALHFLNKMK------IMVVKDIERED---------------------IEFICKTIGTKPVAHV-- 327 (518)
T ss_pred EEEeccccccCcCHHHHHHHHHcC------cEEEecCCHHH---------------------HHHHHHHhCCEEeccc--
Confidence 999 8999999999999875 68999998776 9999999999999999
Q ss_pred CCCCCCCceeecEEEEe---c-ceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcc
Q 018642 132 SLYIPLMLGSCKKVKVT---N-NEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGAT 207 (352)
Q Consensus 132 ~~~~~~~LG~a~~v~v~---~-~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~t 207 (352)
+++++++||+|++|++. + ++++++.+|++ ++++|||+|||+|
T Consensus 328 ~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~----------------------------------~~~~~tI~lrG~t 373 (518)
T 3iyg_D 328 DQFTADMLGSAELAEEVSLNGSGKLIKITGCAS----------------------------------PGKTVTIVVRGSN 373 (518)
T ss_pred ccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC----------------------------------CCceEEEEECCCC
Confidence 99999999999999863 4 57889999864 2578999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Q 018642 208 TAESRKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS 285 (352)
Q Consensus 208 e~~l~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~ 285 (352)
+.+++|+||++|||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.
T Consensus 374 e~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~ 453 (518)
T 3iyg_D 374 KLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPI 453 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 9999999999999999999999999 9999999999999999998765 8999999999999999999999999999999
Q ss_pred -HHHHHHcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhc
Q 018642 286 -VVEKLLGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQR 346 (352)
Q Consensus 286 -vv~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~ 346 (352)
++.+|++. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|.+
T Consensus 454 ~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~e~a~~iL~iD~ii~~ 517 (518)
T 3iyg_D 454 STVTELRNRHAQGEKTTGINVRKGGISNILEELVVQP-LLVSVSALTLATETVRSILKIDDVVNT 517 (518)
T ss_pred HHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEc-HHHHHHHHHHHHHHHHHHHhhcceEec
Confidence 99999874 4568999999999999999999999 999999999999999999999999865
No 20
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-58 Score=475.99 Aligned_cols=275 Identities=17% Similarity=0.194 Sum_probs=246.4
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCCCC-------------CHHH-----------HHHHHhhcccccCCCcE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENKIL-------------DKNI-----------FAQAIGAISCNEVKRPL 56 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~i~-------------~~~~-----------i~~~l~~~~~~~~~~pl 56 (352)
|.||+||.+|||.+ .++||+|+++|++++ ++++ +.+.++. +.+.|+||
T Consensus 208 ~v~dk~~~~~~m~~------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~k--I~~~g~nv 279 (529)
T 3iyg_A 208 YALNCVVGSQGMPK------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQK--ILATGANV 279 (529)
T ss_pred eEEecCcccccCCc------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHhcCCCE
Confidence 57888998887653 688999999999653 3333 5566777 99999999
Q ss_pred EEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC----C
Q 018642 57 LVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN----S 132 (352)
Q Consensus 57 lii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~----~ 132 (352)
||++++|+++|+++|+.|+ ++||++ .++++|+|||++|||+++++..+ +
T Consensus 280 vi~~~~I~d~al~~L~~~g------I~av~~---------------------v~k~~leria~~tGa~iv~~~~~l~~~e 332 (529)
T 3iyg_A 280 ILTTGGIDDMCLKYFVEAG------AMAVRR---------------------VLKRDLKRIAKASGATVLSTLANLEGEE 332 (529)
T ss_pred EEECCCCCHHHHHHHHHcC------Cceecc---------------------CCHHHHHHHHHHhCCeeecchhcccchh
Confidence 9999999999999999987 468887 56777999999999999999822 2
Q ss_pred CCCCCCceeecEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchH
Q 018642 133 LYIPLMLGSCKKVK---VTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTA 209 (352)
Q Consensus 133 ~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~ 209 (352)
++++++||+|++|+ +++++++++.+|+++ ++|||+|||+|+.
T Consensus 333 ~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~ 377 (529)
T 3iyg_A 333 TFEASMLGQAEEVVQERICDDELILIKNTKAR-----------------------------------TSASVILRGANDF 377 (529)
T ss_pred ccChhhCccceEEEEEEeCCceEEEEEcCCCC-----------------------------------ceEEEEECCchHH
Confidence 34578899999997 789999999998763 5799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-H
Q 018642 210 ESRKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-V 286 (352)
Q Consensus 210 ~l~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-v 286 (352)
+++|+||++|||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||++||++||+|||+|+. +
T Consensus 378 ~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~ 457 (529)
T 3iyg_A 378 MCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDL 457 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999999999999999999 9999999999999999999766 8999999999999999999999999999999 9
Q ss_pred HHHHHccC---C--------CCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhc
Q 018642 287 VEKLLGQE---N--------PDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQR 346 (352)
Q Consensus 287 v~kl~~~~---~--------~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~ 346 (352)
+++|++.+ . .++|||+.+|++.||++.||||| +.||+++|++|+++|++||.+|++|+.
T Consensus 458 v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp-~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (529)
T 3iyg_A 458 VAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEP-TIVKVKSLKFATEAAITILRIDDLIKL 527 (529)
T ss_pred HHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEec-HHHHHHHHHHHHHHHHHHHhHHhhhcC
Confidence 99998742 2 57999999999999999999999 999999999999999999999999975
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-58 Score=471.42 Aligned_cols=276 Identities=13% Similarity=0.194 Sum_probs=245.0
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecC-------------CCCCHHHHHHHHhh--------cc-cccCCCcEEE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHEN-------------KILDKNIFAQAIGA--------IS-CNEVKRPLLV 58 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~-------------~i~~~~~i~~~l~~--------~~-~~~~~~plli 58 (352)
|.||+||.+| +|+.+++||+||++|+ +|++++++.|+++. ++ +.+.|..++|
T Consensus 206 ~v~dk~~~~~------~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi 279 (515)
T 3iyg_G 206 VMINKDVTHP------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVI 279 (515)
T ss_pred EEEeCCCCCC------CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 5677777777 5778999999999999 78899999999982 11 7776655555
Q ss_pred EecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCCCC
Q 018642 59 VANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIPLM 138 (352)
Q Consensus 59 i~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~~~ 138 (352)
+.++|++.|+++|..++ ++||++ .++++|+|||++|||+++++. +++++++
T Consensus 280 ~~~~I~~~al~~L~~~~------I~av~~---------------------~~k~~leria~~tGa~ii~~l--~~l~~~~ 330 (515)
T 3iyg_G 280 TEKGISDLAQHYLMRAN------ITAIRR---------------------VRKTDNNRIARACGARIVSRP--EELREED 330 (515)
T ss_pred ECCccCHHHHHHHHHCC------ceeecc---------------------CCHHHHHHHHHHhCCeeeccc--cccChhh
Confidence 55589999999988644 467766 677889999999999999999 9999999
Q ss_pred cee-ecEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHH
Q 018642 139 LGS-CKKVKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKK 214 (352)
Q Consensus 139 LG~-a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~ 214 (352)
||+ |+.|++. +++++|+.||+++ ++|||+|||+|+++++|+
T Consensus 331 LG~~a~~v~~~~~g~~~~~~i~g~~~~-----------------------------------~~~TIllrG~t~~~l~E~ 375 (515)
T 3iyg_G 331 VGTGAGLLEIKKIGDEYFTFITECKDP-----------------------------------KACTILLRGASKEILSEV 375 (515)
T ss_pred cCCcccEEEEEEECCceEEEEeCCCCC-----------------------------------CeEEEEEcCCCHHHHHHH
Confidence 999 9999864 5689999999873 469999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHH
Q 018642 215 RKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLL 291 (352)
Q Consensus 215 er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~ 291 (352)
||++|||||++|++++++ +|||||++|+++|.+|++++.. ++++|+|+++|++||++||++||+|||+|+. ++.+|+
T Consensus 376 er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~ 455 (515)
T 3iyg_G 376 ERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLR 455 (515)
T ss_pred HHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 999999999999999765 9999999999999999998765 8999999999999999999999999999999 999998
Q ss_pred ccC----CCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 292 GQE----NPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 292 ~~~----~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
+.+ ++++|||+.+|++.||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 456 ~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp-~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 456 AKHTQENCETWGVNGETGTLVDMKELGIWEP-LAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHhcCCCceeeeCCCCcccccHHcCCEEc-HHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 752 457999999999999999999999 9999999999999999999999998643
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.7e-58 Score=467.89 Aligned_cols=280 Identities=14% Similarity=0.217 Sum_probs=251.5
Q ss_pred CeecceecccccccC-cCcee-EeeCce-eeeecCC----CCCHHHHHHH-------Hhh-cc-cccCCCcEEEEecCch
Q 018642 1 MKLNWGSMSRYFLYE-EDQTL-DLKNPF-ILIHENK----ILDKNIFAQA-------IGA-IS-CNEVKRPLLVVANDVE 64 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~~~~-~l~~~~-il~~d~~----i~~~~~i~~~-------l~~-~~-~~~~~~pllii~~~i~ 64 (352)
|+||+||.+ |.++ ++.++ .|.+|+ ++.+|.+ |++++++.|+ |+. ++ +.+.|+||||++++|+
T Consensus 205 ~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~ 282 (512)
T 3iyg_Q 205 MVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVA 282 (512)
T ss_pred EEEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCcc
Confidence 689999976 7787 64444 568888 8888888 9999999998 551 12 8889999999999999
Q ss_pred hhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCCCCceeecE
Q 018642 65 EEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIPLMLGSCKK 144 (352)
Q Consensus 65 ~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~~~LG~a~~ 144 (352)
+.++++|.. .+++|||+|+++| |+|||++|||+++++. +++++++||+|++
T Consensus 283 ~la~~~l~k------~~I~av~~~~~~d---------------------le~ia~~tGa~iis~l--~~~~~~~LG~a~~ 333 (512)
T 3iyg_Q 283 DMALHYANK------YNIMLVRLNSKWD---------------------LRRLCKTVGATALPRL--NPPVLEEMGHCDS 333 (512)
T ss_pred HHHHHHHHH------CCeEEEEeCCHHH---------------------HHHHHHHhCCEEeccc--ccCCHHHCCcccE
Confidence 999999764 4589999998777 9999999999999999 9999999999999
Q ss_pred EEEe---cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHHHHHHHHH
Q 018642 145 VKVT---NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKKRKRATNA 221 (352)
Q Consensus 145 v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~er~i~DA 221 (352)
|++. +++++++.+|+. ++++|||+|||+|+.+++|+||++|||
T Consensus 334 v~~~~~g~~~~~~~~~~~~----------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DA 379 (512)
T 3iyg_Q 334 VYLSEVGDTQVVVFKHEKE----------------------------------DGAISTIVLRGSTDNLMDDIERAVDDG 379 (512)
T ss_pred EEEEEeCCeEEEEEEcccC----------------------------------CCceEEEEECCCcHHHHHHHHHHHHHH
Confidence 9864 558888888743 367999999999999999999999999
Q ss_pred HHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHcc---CC
Q 018642 222 LNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQ---EN 295 (352)
Q Consensus 222 l~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~~~---~~ 295 (352)
||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++.+|++. ++
T Consensus 380 l~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 459 (512)
T 3iyg_Q 380 VNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGN 459 (512)
T ss_pred HHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
Confidence 99999999999 9999999999999999998765 8999999999999999999999999999999 99999874 45
Q ss_pred CCeeeeCCCC--cccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhc
Q 018642 296 PDLEYDPPRD--EYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQR 346 (352)
Q Consensus 296 ~~~G~d~~~g--~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~ 346 (352)
+++|||+.+| +++||++.||||| ++||+++|++|+++|++||.+|++|.+
T Consensus 460 ~~~G~d~~~~~g~~~d~~~~gI~dp-~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 460 KNVGLDIEAEVPAVKDMLEAGVLDT-YLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred CcEEEecCCCCCcccchHhccCeEc-HHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 7899999965 9999999999999 999999999999999999999999864
No 23
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=7.8e-59 Score=478.83 Aligned_cols=275 Identities=16% Similarity=0.240 Sum_probs=234.7
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCCCC-------------CHH------------------HHHHHHhhccc
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENKIL-------------DKN------------------IFAQAIGAISC 49 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~i~-------------~~~------------------~i~~~l~~~~~ 49 (352)
|.||+||.+| +|+.+++||+||++|++|+ +++ +|+|+++. +
T Consensus 213 ~v~dk~~~~~------~m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~--v 284 (546)
T 3p9d_F 213 LVLDHGGRHP------DMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNE--V 284 (546)
T ss_dssp CEESCCCCSS------SSCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred EEEecccccc------cCcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 3455555555 6888999999999998654 222 22222222 2
Q ss_pred cc--CCCcEEEEec-CchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEe
Q 018642 50 NE--VKRPLLVVAN-DVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVV 126 (352)
Q Consensus 50 ~~--~~~pllii~~-~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~ii 126 (352)
.+ .|+|+||+++ +|+++|+++|..|++ ++|+++ ++.+|+|||++|||+++
T Consensus 285 ~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI------~~vr~v---------------------~~~~leria~~tGa~ii 337 (546)
T 3p9d_F 285 CGMDPDKGFVIINQKGIDPMSLDVFAKHNI------LALRRA---------------------KRRNMERLQLVTGGEAQ 337 (546)
T ss_dssp --------CEEEESSCCCHHHHHHHTTTTC------EEECCC---------------------CHHHHHHHHHTTTBCCC
T ss_pred hhhccCCceEEEecCcCcHHHHHHHHHCCC------eeEecC---------------------CHHHHHHHHHHhCCEEe
Confidence 33 5789888775 999999999999885 588874 45669999999999999
Q ss_pred eccCCCCCCCCCceeecEE---EEecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEE
Q 018642 127 TAASNSLYIPLMLGSCKKV---KVTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKV 203 (352)
Q Consensus 127 s~~~~~~~~~~~LG~a~~v---~v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~v 203 (352)
++. +++++++||+|++| .+++++++|+.||+++ .+|||+|
T Consensus 338 ~~l--~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-----------------------------------~~~tI~l 380 (546)
T 3p9d_F 338 NSV--EDLSPQILGFSGLVYQETIGEEKFTYVTENTDP-----------------------------------KSCTILI 380 (546)
T ss_dssp CCC--SSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-----------------------------------SCEEEEC
T ss_pred cch--hhCCHhHCCcccEEEEEEecCceEEEEecCCCC-----------------------------------ceEEEEE
Confidence 999 99999999999999 5688999999999874 4699999
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhc---cCCC-ChhHHHHHHHHHHHHHHHHHHHHH
Q 018642 204 GGATTAESRKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEK---LPAM-NIGEKIGVKLLQHAVKMPLYTIAS 278 (352)
Q Consensus 204 gG~te~~l~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~---~~~~-~~~eq~gi~~~a~AL~~pp~~La~ 278 (352)
||+|+.+++|+||++|||||++|+++++| +|||||++|+++|.+|++ |+.. ++++|+|+++|++||+.||++||+
T Consensus 381 rG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~ 460 (546)
T 3p9d_F 381 KGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVK 460 (546)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999998 5655 899999999999999999999999
Q ss_pred hcCCCHH-HHHHHHcc--------CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhccC
Q 018642 279 TAGFQVS-VVEKLLGQ--------ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQK 348 (352)
Q Consensus 279 NAG~d~~-vv~kl~~~--------~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~~ 348 (352)
|||+|+. ++.+|++. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|.+.+
T Consensus 461 NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp-~~vk~~al~~A~~~a~~iL~iD~ii~~~~ 538 (546)
T 3p9d_F 461 NSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDS-YRVLRNAITGATGIASNLLLCDELLRAGR 538 (546)
T ss_dssp TTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEE-HHHHHHHHHHHHHHHHHHHTEEEEEEECC
T ss_pred HcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEec-HHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999 99999863 3457999999999999999999999 99999999999999999999999998753
No 24
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=4.9e-59 Score=478.64 Aligned_cols=273 Identities=17% Similarity=0.206 Sum_probs=248.3
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCC--------------CCCHHHH-----------HHHHhhcccccCCCc
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENK--------------ILDKNIF-----------AQAIGAISCNEVKRP 55 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~--------------i~~~~~i-----------~~~l~~~~~~~~~~p 55 (352)
|.||+||.+|| +..++||+||+++++ +++++++ .+.++. +.+.|.|
T Consensus 212 ~~~dk~~~~~~-------p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~--I~~~g~~ 282 (527)
T 3p9d_B 212 FILAKKFGNNQ-------PKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAK--ISKFGIN 282 (527)
T ss_dssp CCCSCCCSSSC-------CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHH--HTTTCCB
T ss_pred EEEecccCCCC-------CeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHH--HHhcCCC
Confidence 68999999997 224689999998774 4455554 567777 8899999
Q ss_pred EEEEecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCC
Q 018642 56 LLVVANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYI 135 (352)
Q Consensus 56 llii~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~ 135 (352)
|||++++|+++|+++|..|+ +++|++|+++| |+|||++|||+++++. ++++
T Consensus 283 vvi~~~~I~~~al~~L~~~~------i~av~~~~~~d---------------------le~ia~~tGa~iv~~~--~~~~ 333 (527)
T 3p9d_B 283 TFINRQLIYDYPEQLFTDLG------INSIEHADFEG---------------------VERLALVTGGEVVSTF--DEPS 333 (527)
T ss_dssp EEESSCCCTTTHHHHHHHTC------BCCCCCCHHHH---------------------HHHHHHHTCCCCCSTT--SCCT
T ss_pred EEEECCCCCHHHHHHHHHCC------CEEEecCCHHH---------------------HHHHHHHhCCEEecch--hhCC
Confidence 99999999999999999877 47999987666 9999999999999999 8999
Q ss_pred CCCceeecEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHH
Q 018642 136 PLMLGSCKKVK---VTNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESR 212 (352)
Q Consensus 136 ~~~LG~a~~v~---v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~ 212 (352)
+++||+|++|+ +++++++++.||++ +++|||+|||+|+.+++
T Consensus 334 ~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~tI~lrg~te~~l~ 378 (527)
T 3p9d_B 334 KCKLGECDVIEEIMLGEQPFLKFSGCKA-----------------------------------GEACTIVLRGATDQTLD 378 (527)
T ss_dssp TSCEECSBCCBCCCSSSCCBCCBCSSCC-----------------------------------SCCEECBCCTTCTTHHH
T ss_pred HHHCCCCcEEEEEEecceEEEEEECCCC-----------------------------------CCEEEEEEcCCCHHHHH
Confidence 99999999997 57889999999875 57899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHH
Q 018642 213 KKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEK 289 (352)
Q Consensus 213 E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~k 289 (352)
|+||+++||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++++
T Consensus 379 E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~ 458 (527)
T 3p9d_B 379 EAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSK 458 (527)
T ss_dssp HHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHH
Confidence 99999999999999999999 9999999999999999998765 8999999999999999999999999999999 9999
Q ss_pred HHcc---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 290 LLGQ---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 290 l~~~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
|++. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 459 l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp-~~vk~~al~~A~e~a~~iL~id~ii~~~ 518 (527)
T 3p9d_B 459 LRSSIYNGISTSGLDLNNGTIADMRQLGIVES-YKLKRAVVSSASEAAEVLLRVDNIIRAR 518 (527)
T ss_dssp HHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEE-TTHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_pred HHHHHhcCCCceeEECCCCCCcchHhccCEEc-HHHHHHHHHHHHHHHHHHHhHHHHHhcC
Confidence 9875 4568999999999999999999999 9999999999999999999999988654
No 25
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.6e-58 Score=476.73 Aligned_cols=279 Identities=14% Similarity=0.181 Sum_probs=250.6
Q ss_pred CeecceecccccccCcCceeEeeCceeeeecCC-------------CCCHHHHHHHHhh--------cc-cccCCCcEEE
Q 018642 1 MKLNWGSMSRYFLYEEDQTLDLKNPFILIHENK-------------ILDKNIFAQAIGA--------IS-CNEVKRPLLV 58 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~-------------i~~~~~i~~~l~~--------~~-~~~~~~plli 58 (352)
|+||+||.||||.+. +..++||+||++|++ |++++++.|+++. ++ +.+.|.+|||
T Consensus 218 ~~~dk~~~s~yf~~~---~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi 294 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQ---PKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVL 294 (550)
T ss_dssp EEECCCSSCTTCSCS---CSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEE
T ss_pred EEEeccccccccccC---cccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 689999999999864 445999999999998 5677777775432 22 8899999999
Q ss_pred EecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCCCC
Q 018642 59 VANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIPLM 138 (352)
Q Consensus 59 i~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~~~ 138 (352)
++++|++.++++|..++ ++++++ .++++|++||++|||+++++. +++++++
T Consensus 295 ~~~~I~dla~~~L~~~g------I~~v~~---------------------v~k~~lerIa~~tGa~iis~l--~~l~~~~ 345 (550)
T 3p9d_G 295 SKLPIGDLATQFFADRN------IFCAGR---------------------VSADDMNRVIQAVGGSIQSTT--SDIKPEH 345 (550)
T ss_dssp ESSCCCHHHHHTTGGGT------CEEEEC---------------------CCTTHHHHHHHHTCCCCBSSG--GGCCGGG
T ss_pred ECCCccHHHHHHHHHcC------CccccC---------------------cCHHHHHHHHHHhCCceecch--hhCCHHH
Confidence 99999999999977544 457776 455669999999999999999 8999999
Q ss_pred ceeecEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHHH
Q 018642 139 LGSCKKVKV---TNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKKR 215 (352)
Q Consensus 139 LG~a~~v~v---~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~e 215 (352)
||+|++|++ ++++++++.||++ +++|||+|||+|+.+++|+|
T Consensus 346 LG~a~~v~~~~ig~e~~~~~~g~~~-----------------------------------~~~~tI~lrG~te~~l~E~k 390 (550)
T 3p9d_G 346 LGTCALFEEMQIGSERYNLFQGCPQ-----------------------------------AKTCTLLLRGGAEQVIAEVE 390 (550)
T ss_dssp CCCCSBCCCCCCSSSCCEEEBCCTT-----------------------------------CCCCCCCBCSSSHHHHHHHH
T ss_pred cCCceEEEEEEeCCeEEEEEecCCC-----------------------------------CceeEEEEeCCcHHHHHHHH
Confidence 999999976 6889999999876 35799999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHc
Q 018642 216 KRATNALNAAKAAMEEG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLG 292 (352)
Q Consensus 216 r~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~~ 292 (352)
|++|||||++|+++++| +|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+. ++++|++
T Consensus 391 r~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 470 (550)
T 3p9d_G 391 RSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRL 470 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999999999999 9999999999999999998655 8999999999999999999999999999999 9999987
Q ss_pred c---CCCCeeeeCCCCcccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 293 Q---ENPDLEYDPPRDEYVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 293 ~---~~~~~G~d~~~g~~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
. +++++|||+.+|+++||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 471 ~h~~~~~~~G~d~~~g~~~dm~~~gI~dp-~~vk~~al~~A~~~a~~iL~id~ii~~~ 527 (550)
T 3p9d_G 471 AHSKGEKWYGVVFETENIGDNFAKFVWEP-ALVKINALNSATEATNLILSVDETITNK 527 (550)
T ss_dssp HHHHSCSCCCBCSSSSSBCCHHHHTCEEE-HHHHHHHHHHHHHHHHHHHTEEEEECCC
T ss_pred HHhcCCCceeeeCCCCcccchHhccCEec-HHHHHHHHHHHHHHHHHHHhHHHHhhCC
Confidence 4 3568999999999999999999999 9999999999999999999999998754
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6.5e-57 Score=466.21 Aligned_cols=266 Identities=16% Similarity=0.189 Sum_probs=233.1
Q ss_pred CceeEee---CceeeeecCC-------------CCCHHHHHH-----------HHhhcccccCCCcEEEEecCchhhhhh
Q 018642 17 DQTLDLK---NPFILIHENK-------------ILDKNIFAQ-----------AIGAISCNEVKRPLLVVANDVEEEVAG 69 (352)
Q Consensus 17 ~~~~~l~---~~~il~~d~~-------------i~~~~~i~~-----------~l~~~~~~~~~~pllii~~~i~~~al~ 69 (352)
+|+.+++ ||+||++|++ |++++++.+ .++. +.+.|.||||++++|+++|++
T Consensus 234 ~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~--I~~~g~~vvi~~~~I~~~al~ 311 (568)
T 3p9d_H 234 GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKE--IADMGVECIVAGAGVGELALH 311 (568)
T ss_dssp SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHH--HHHTTCCEEEECSCCCHHHHH
T ss_pred CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH--HHhcCCeEEEECCCcChHHHH
Confidence 5778888 9999999997 777888877 4555 889999999999999999999
Q ss_pred hhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCCCCceeecEEEEe-
Q 018642 70 FVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIPLMLGSCKKVKVT- 148 (352)
Q Consensus 70 ~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~~~LG~a~~v~v~- 148 (352)
+|..++ ++|||+|++.+ |+|||++|||+++++. +++++++||+|++|++.
T Consensus 312 ~L~~~g------I~av~~v~~~~---------------------leria~~tGa~ivs~l--~~l~~~~LG~a~~v~~~~ 362 (568)
T 3p9d_H 312 YLNRYG------ILVLKVPSKFE---------------------LRRLCRVCGATPLPRL--GAPTPEELGLVETVKTME 362 (568)
T ss_dssp HHHHHT------CEEECCCCHHH---------------------HHHHHHHHSCCCCSSS--SCCCGGGCEECSCCCCCE
T ss_pred HHHHCC------eEEEecCCHHH---------------------HHHHHHHhCCEEEecc--ccCCHHHCCcceEEEEEE
Confidence 998865 58999987555 9999999999999999 89999999999999754
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHH
Q 018642 149 --NNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTAESRKKRKRATNALNAAK 226 (352)
Q Consensus 149 --~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k 226 (352)
+++++++.+|+. +++++|||+|||+|+.+++|+||++|||||++|
T Consensus 363 ig~~~~~~~~g~~~---------------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr 409 (568)
T 3p9d_H 363 IGGDRVTVFKQEQG---------------------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVK 409 (568)
T ss_dssp ETTEECBCCCCCSS---------------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCC---------------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHH
Confidence 589999999862 236789999999999999999999999999999
Q ss_pred HHHh--cC-ccccchHHHHHHHHHHhccCCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHccC-------
Q 018642 227 AAME--EG-IIPGGGVALLHASEELEKLPAM-NIGEKIGVKLLQHAVKMPLYTIASTAGFQVS-VVEKLLGQE------- 294 (352)
Q Consensus 227 ~a~~--~g-vVpGGGaael~~s~~L~~~~~~-~~~eq~gi~~~a~AL~~pp~~La~NAG~d~~-vv~kl~~~~------- 294 (352)
++++ ++ +|||||++|+++|.+|++++.. ++++|+|+++|++||++||++||+|||+|+. ++.+|++.+
T Consensus 410 ~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 489 (568)
T 3p9d_H 410 GLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGA 489 (568)
T ss_dssp HTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCC
T ss_pred HHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccc
Confidence 9999 65 9999999999999999998765 8999999999999999999999999999999 999998753
Q ss_pred ----CCCeeeeCCCCc---ccchhhCCcccCchhHHHHHHHHHHHHHHHHHhhHhHhhcc
Q 018642 295 ----NPDLEYDPPRDE---YVDAVKSAIVDPPLKLIRNELDDAVSYFVSRWCSTEKLQRQ 347 (352)
Q Consensus 295 ----~~~~G~d~~~g~---~~dm~~~GIiDP~~~Vk~~al~~A~~~A~~iL~~de~i~~~ 347 (352)
++++|||+.+|+ +.||++.||||| ++||+++|++|+++|++||.+|++|...
T Consensus 490 ~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp-~~vk~~al~~A~e~a~~iL~iD~ii~~~ 548 (568)
T 3p9d_H 490 VKTDHLYKGVDIDGESDEGVKDIREENIYDM-LATKKFAINVATEAATTVLSIDQIIMAK 548 (568)
T ss_dssp CCCTTSSSCCCHHHHTCCCCHHHHHHHHHHH-HHHHHHHHHCCEECBCCC----------
T ss_pred cccCCCceeEcccCCCcccccChHHccCEEc-HHHHHHHHHHHHHHHHHHHhHHHHhhcc
Confidence 347999999997 999999999999 9999999999999999999999999764
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-55 Score=392.20 Aligned_cols=183 Identities=31% Similarity=0.492 Sum_probs=179.5
Q ss_pred CeecceecccccccC-cCceeEeeCceeeeecCCCCCHHHHHHHHhhcccccCCCcEEEEecCchhhhhhhhhhcccccc
Q 018642 1 MKLNWGSMSRYFLYE-EDQTLDLKNPFILIHENKILDKNIFAQAIGAISCNEVKRPLLVVANDVEEEVAGFVVTNETFSK 79 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~~~~~l~~~~il~~d~~i~~~~~i~~~l~~~~~~~~~~pllii~~~i~~~al~~l~~n~~~~~ 79 (352)
|+||+||+||||+|+ ++|+++|+||+||+||+||+++++++|+|+. +.+.++||||||+||++|||++|+.|+++|.
T Consensus 8 mqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~--~~~~~kpLlIIAedvegeaLatLvvNklrg~ 85 (194)
T 3m6c_A 8 IGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEK--VAGTGKPLLIVAEDVEGEALATLVVNAIRKT 85 (194)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHH--HHHHTCCEEEEESEECHHHHHHHHHHHHHTS
T ss_pred eEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHH--HHHhCCCeEEEecccccchhhhhhhhhccce
Confidence 899999999999999 9999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC---CCCCCCCceeecEEEEecceEEEEc
Q 018642 80 TKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN---SLYIPLMLGSCKKVKVTNNEMIIHG 156 (352)
Q Consensus 80 ~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~---~~~~~~~LG~a~~v~v~~~~~~~i~ 156 (352)
++|||||+|+||| +||++|+|||++|||+++++..| ++++.++||+|++|.+++|+|++++
T Consensus 86 l~v~AVKAPgfGd----------------~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~ 149 (194)
T 3m6c_A 86 LKAVAVKGPYFGD----------------RRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVD 149 (194)
T ss_dssp SCEEEEECSSCHH----------------HHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEE
T ss_pred EEEEEEECCCCch----------------hhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEec
Confidence 9999999999999 99999999999999999999977 8899999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEE
Q 018642 157 GSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAIL 201 (352)
Q Consensus 157 ~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI 201 (352)
|.++++.|++||++|+++++.++|+|+|++|+|||++|+||+|+|
T Consensus 150 G~g~~~~I~~Rv~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 150 GGGTAEAVANRAKHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp ECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999999999999999865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=2.6e-55 Score=391.29 Aligned_cols=182 Identities=32% Similarity=0.506 Sum_probs=178.4
Q ss_pred CeecceecccccccC-cCceeEeeCceeeeecCCCCCHHHHHHHHhhcccccCCCcEEEEecCchhhhhhhhhhcccccc
Q 018642 1 MKLNWGSMSRYFLYE-EDQTLDLKNPFILIHENKILDKNIFAQAIGAISCNEVKRPLLVVANDVEEEVAGFVVTNETFSK 79 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~~~~~l~~~~il~~d~~i~~~~~i~~~l~~~~~~~~~~pllii~~~i~~~al~~l~~n~~~~~ 79 (352)
|+||+||+||||+|+ ++|+++|+||+||++|+||+++++++|+|+. +.+.++||||||+||++|||++|+.|+++|.
T Consensus 15 ~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~--v~~~~rpLlIIAEDvegEALatLvvNklrg~ 92 (201)
T 3osx_A 15 MQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEG--VAKASKPLVIIAEDVEGEALATLVVNNMRGI 92 (201)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHH--HHTSSCCEEEEEEEECHHHHHHHHHHHHHTS
T ss_pred cEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHH--HHHhCCCeEEEeccccchhhhHHHHhhccce
Confidence 799999999999999 9999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC---CCCCCCCceeecEEEEecceEEEEc
Q 018642 80 TKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN---SLYIPLMLGSCKKVKVTNNEMIIHG 156 (352)
Q Consensus 80 ~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~---~~~~~~~LG~a~~v~v~~~~~~~i~ 156 (352)
++|||||+|+||| +||++|+|||++|||+++++..| ++++.++||+|++|.+++|+|++++
T Consensus 93 l~v~AVKAPgFGd----------------rRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~ 156 (201)
T 3osx_A 93 VKVASVKAPGFGD----------------RRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIID 156 (201)
T ss_dssp CCEEEEECSSCHH----------------HHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEE
T ss_pred EEEEEEeCCCCcc----------------chhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEec
Confidence 9999999999999 99999999999999999999977 8899999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEE
Q 018642 157 GSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAI 200 (352)
Q Consensus 157 ~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~at 200 (352)
|.++++.|++||++|+++++.++|+|+|++|+|||++|+||+|+
T Consensus 157 G~G~~~~I~~Rv~qIr~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 157 GVGEEGAIAARVTQIRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp ECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999999999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=8.6e-44 Score=303.20 Aligned_cols=139 Identities=31% Similarity=0.497 Sum_probs=136.1
Q ss_pred CeecceecccccccC-cCceeEeeCceeeeecCCCCCHHHHHHHHhhcccccCCCcEEEEecCchhhhhhhhhhcccccc
Q 018642 1 MKLNWGSMSRYFLYE-EDQTLDLKNPFILIHENKILDKNIFAQAIGAISCNEVKRPLLVVANDVEEEVAGFVVTNETFSK 79 (352)
Q Consensus 1 ~~~~~G~~s~~f~~~-~~~~~~l~~~~il~~d~~i~~~~~i~~~l~~~~~~~~~~pllii~~~i~~~al~~l~~n~~~~~ 79 (352)
|+|||||+||||+|+ ++|+++|+||+||++|+||+++++++|+||. +.+.++||||||+|+++|||++|+.||++|.
T Consensus 2 mqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~--v~~~~~pLlIIAedvegeaLatLvvNklrg~ 79 (145)
T 1srv_A 2 YQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ--VAQTGKPLLIIAEDVEGEALATLVVNKLRGT 79 (145)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHH--HHTTTCCEEEEESEECHHHHHHHHHHHHTTS
T ss_pred ccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHH--HHHHCCCEEEEecccchhhhhhhhhhhhccc
Confidence 899999999999999 9999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCC---CCCCCCCceeecEEEEecceEEEEc
Q 018642 80 TKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASN---SLYIPLMLGSCKKVKVTNNEMIIHG 156 (352)
Q Consensus 80 ~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~---~~~~~~~LG~a~~v~v~~~~~~~i~ 156 (352)
++|||||+|+||| +||++|+|||++|||+++++..| ++++.++||+|++|++++++|++++
T Consensus 80 l~v~AVKAPgfGd----------------~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~ 143 (145)
T 1srv_A 80 LSVAAVKAPGFGD----------------RRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVG 143 (145)
T ss_dssp CCEEEEECCSSHH----------------HHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEE
T ss_pred ceEEEEeCCCcch----------------hhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeC
Confidence 9999999999999 99999999999999999999977 8889999999999999999999998
Q ss_pred C
Q 018642 157 G 157 (352)
Q Consensus 157 ~ 157 (352)
|
T Consensus 144 G 144 (145)
T 1srv_A 144 G 144 (145)
T ss_dssp E
T ss_pred C
Confidence 6
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.79 E-value=2.5e-19 Score=159.58 Aligned_cols=141 Identities=12% Similarity=0.171 Sum_probs=114.9
Q ss_pred ecceecccccccCcCceeEeeCceeeeecCCCC-------------CHHHHHHH-----------HhhcccccCCCcEEE
Q 018642 3 LNWGSMSRYFLYEEDQTLDLKNPFILIHENKIL-------------DKNIFAQA-----------IGAISCNEVKRPLLV 58 (352)
Q Consensus 3 ~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~i~-------------~~~~i~~~-----------l~~~~~~~~~~plli 58 (352)
+.+|++.++-+.+++|+..++||+|+++++.++ +++++.++ ++. +.+.|.++|+
T Consensus 6 lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~k--I~~~g~nVVl 83 (178)
T 1gml_A 6 VLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCED--IIQLKPDVVI 83 (178)
T ss_dssp EEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHH--HHTTCCSEEE
T ss_pred EEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHH--HhhcCCcEEE
Confidence 567999988888888999999999999999655 33334433 444 8899999999
Q ss_pred EecCchhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCCCC
Q 018642 59 VANDVEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIPLM 138 (352)
Q Consensus 59 i~~~i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~~~ 138 (352)
+.++|++.|+++|..+++ +||++. ++++|++||++|||+++++. +++++++
T Consensus 84 ~~k~I~d~a~~~l~k~gI------~~vr~v---------------------~~~dleria~atGa~iv~~~--~~l~~~~ 134 (178)
T 1gml_A 84 TEKGISDLAQHYLMRANV------TAIRRV---------------------RKTDNNRIARACGARIVSRP--EELREDD 134 (178)
T ss_dssp ESSCBCHHHHHHHHHTTC------EEECCC---------------------CHHHHHHHHHHHCCCEESCG--GGCCGGG
T ss_pred ECCcccHHHHHHHHHCCC------EEEecC---------------------CHHHHHHHHHHhCCeEeCCh--hhCChhh
Confidence 999999999999998775 688885 45569999999999999999 8999999
Q ss_pred cee-ecEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHhhccCHHHHHHHHHHHHhhcCceEEEEEcCcchH
Q 018642 139 LGS-CKKVKV---TNNEMIIHGGSGNQVYIEDRCEQLSDAIEMSTSDYEIKLLEERLQMLSSRVAILKVGGATTA 209 (352)
Q Consensus 139 LG~-a~~v~v---~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~e~~~L~eRl~~l~g~~atI~vgG~te~ 209 (352)
||+ |+.|++ ++++++++.||+++ ++|||++||+|.+
T Consensus 135 LG~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 135 VGTGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp SBCCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred hCCcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 999 999974 67899999999763 4689999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.68 E-value=8.4e-17 Score=140.76 Aligned_cols=128 Identities=16% Similarity=0.205 Sum_probs=106.2
Q ss_pred ceecccccccCcCceeEeeCceeeeecCCCC-------------CHHHHHHHHhh--------cc-cccCCCcEEEEecC
Q 018642 5 WGSMSRYFLYEEDQTLDLKNPFILIHENKIL-------------DKNIFAQAIGA--------IS-CNEVKRPLLVVAND 62 (352)
Q Consensus 5 ~G~~s~~f~~~~~~~~~l~~~~il~~d~~i~-------------~~~~i~~~l~~--------~~-~~~~~~pllii~~~ 62 (352)
+|++.++-+.+++|+..++||+|+++++.++ +++++.++++. ++ +.+.|.++|++.++
T Consensus 2 ~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~ 81 (159)
T 1ass_A 2 SGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKG 81 (159)
T ss_dssp CCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESSC
T ss_pred ceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECCc
Confidence 5888888877788999999999999999665 44455444333 22 88889999999999
Q ss_pred chhhhhhhhhhccccccceEEEecCCCCCCchhhhhcccchhhhhHhhHHHHHHHHHHhCCeEeeccCCCCCCCCCceee
Q 018642 63 VEEEVAGFVVTNETFSKTKLCFVKPPVFEESWKAVYGENCELVYEENCKAIMRDIAILTGGRVVTAASNSLYIPLMLGSC 142 (352)
Q Consensus 63 i~~~al~~l~~n~~~~~~~v~avk~p~~~d~~~~~~~~~~~~~~~~~r~~~Ledia~~tG~~iis~~~~~~~~~~~LG~a 142 (352)
|++.|+++|..+++ +||++. ++++|++||++|||+++++. ++++++.||+|
T Consensus 82 I~d~a~~~l~k~gI------~~v~~v---------------------~~~dleria~atGa~iv~~~--~~l~~~~LG~~ 132 (159)
T 1ass_A 82 IDDVAQHYLAKEGI------YAVRRV---------------------KKSDMEKLAKATGAKIVTDL--DDLTPSVLGEA 132 (159)
T ss_dssp BCHHHHHHHHHTTC------EEECSC---------------------CHHHHHHHHHHHTCCCBSST--TSCCTTSCEEE
T ss_pred cCHHHHHHHHHCCC------EEEccC---------------------CHHHHHHHHHHhCCeeeCcc--ccCCcccCccc
Confidence 99999999988765 688885 45569999999999999999 99999999999
Q ss_pred cEEEE---ecceEEEEcCCCCh
Q 018642 143 KKVKV---TNNEMIIHGGSGNQ 161 (352)
Q Consensus 143 ~~v~v---~~~~~~~i~~~~~~ 161 (352)
+.|++ ++++++++.+|++-
T Consensus 133 ~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 133 ETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEEEEEEETTEEEEEEESCC--
T ss_pred eEEEEEEECCeEEEEEECCCCc
Confidence 99974 67899999999863
No 32
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=30.49 E-value=56 Score=24.15 Aligned_cols=23 Identities=22% Similarity=0.156 Sum_probs=16.7
Q ss_pred cccCCCcEEEEecCchhhhhhhh
Q 018642 49 CNEVKRPLLVVANDVEEEVAGFV 71 (352)
Q Consensus 49 ~~~~~~pllii~~~i~~~al~~l 71 (352)
+.+-..-|||+|+|++++....+
T Consensus 23 i~~gkaklViiA~D~~~~~~~~i 45 (82)
T 3v7e_A 23 LKRGSVKEVVVAKDADPILTSSV 45 (82)
T ss_dssp HTTTCEEEEEEETTSCHHHHHHH
T ss_pred HHcCCeeEEEEeCCCCHHHHHHH
Confidence 33334789999999999766554
No 33
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=28.73 E-value=33 Score=34.35 Aligned_cols=33 Identities=12% Similarity=-0.002 Sum_probs=27.7
Q ss_pred ecceecccccccCcCceeEeeCceeeeecCCCC
Q 018642 3 LNWGSMSRYFLYEEDQTLDLKNPFILIHENKIL 35 (352)
Q Consensus 3 ~~~G~~s~~f~~~~~~~~~l~~~~il~~d~~i~ 35 (352)
+-+|++..+-+.++.|+..++||+|+++++++.
T Consensus 202 lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le 234 (515)
T 3iyg_E 202 LIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFE 234 (515)
T ss_pred EEeeEEEecccccccccccCCCceEEEEcCccc
Confidence 457888877777788999999999999999874
No 34
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=24.93 E-value=1.6e+02 Score=29.06 Aligned_cols=57 Identities=32% Similarity=0.364 Sum_probs=33.4
Q ss_pred HHHHhhcC----ceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcC-ccccchHHHHHHHHHH
Q 018642 189 ERLQMLSS----RVAILKVGGATTAESRKKRKRATNALNAAKAAMEEG-IIPGGGVALLHASEEL 248 (352)
Q Consensus 189 eRl~~l~g----~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~g-vVpGGGaael~~s~~L 248 (352)
--|.+|+| +..+|++||+ .+++.-+++-.-+.-.+..=... +|.|||...-.....+
T Consensus 47 pyi~~f~~~~~~~~iViK~GGs---v~~~~l~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~ 108 (460)
T 3s6g_A 47 EYLHRFSGIDQERFAVIKVGGA---VIQDDLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAA 108 (460)
T ss_dssp HHHHHTSSSCGGGSEEEEECHH---HHHHCHHHHHHHHHHHHHHTCCCEEEECCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEEEEChH---HhhhHHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHc
Confidence 34556776 7899999995 34443233333333333322234 7899998666655544
No 35
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=24.10 E-value=2.8e+02 Score=24.77 Aligned_cols=54 Identities=19% Similarity=0.372 Sum_probs=30.4
Q ss_pred HHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcC----ccccchHHHHHHHHHH
Q 018642 191 LQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEG----IIPGGGVALLHASEEL 248 (352)
Q Consensus 191 l~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~g----vVpGGGaael~~s~~L 248 (352)
+.++.++..+|++||+.-.. +..++.....+....+.| +|.|||..-=.....+
T Consensus 16 i~~~~~~~iViKlGGs~l~~----~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~ 73 (282)
T 2bty_A 16 IKEFYGKTFVIKFGGSAMKQ----ENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDL 73 (282)
T ss_dssp HHHHTTCEEEEEECSHHHHS----HHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHH
T ss_pred HHHhcCCeEEEEECchhhCC----hhHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHc
Confidence 44566788999999975331 123333333333333444 7899887654333333
No 36
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=21.14 E-value=1.2e+02 Score=20.38 Aligned_cols=32 Identities=25% Similarity=0.503 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHhhccCH-------H--HHHHHHHHHHhhc
Q 018642 164 IEDRCEQLSDAIEMSTSD-------Y--EIKLLEERLQMLS 195 (352)
Q Consensus 164 i~~ri~~l~~~~~~~~~~-------~--e~~~L~eRl~~l~ 195 (352)
++.+++.++..++..... | ...+|+.|+.++.
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE 43 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666555433322 2 2455666665543
No 37
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=21.07 E-value=3.2e+02 Score=24.66 Aligned_cols=55 Identities=20% Similarity=0.303 Sum_probs=31.3
Q ss_pred HHHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcC----ccccchHHHHHHHHHH
Q 018642 190 RLQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEG----IIPGGGVALLHASEEL 248 (352)
Q Consensus 190 Rl~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~g----vVpGGGaael~~s~~L 248 (352)
.+.++.++..+|++||++-. + +..++.....+....+.| +|.|||..-=.....+
T Consensus 19 yi~~~~~k~iViKlGGs~l~--~--~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~ 77 (299)
T 2ap9_A 19 WLKQLHGKVVVVKYGGNAMT--D--DTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRL 77 (299)
T ss_dssp HHHHHTTCEEEEEECTHHHH--S--HHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHH
T ss_pred HHHHhCCCeEEEEECchhhC--C--chHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHc
Confidence 34456788899999997532 1 123333444444444444 7899887643333333
No 38
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=20.52 E-value=2.7e+02 Score=25.35 Aligned_cols=54 Identities=15% Similarity=0.291 Sum_probs=30.9
Q ss_pred HHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcC----ccccchHHHHHHHHHH
Q 018642 191 LQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEG----IIPGGGVALLHASEEL 248 (352)
Q Consensus 191 l~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~g----vVpGGGaael~~s~~L 248 (352)
+.++.++..+|++||+.-.. + ..++.....+....+.| +|.|||..-=.....+
T Consensus 21 i~~~~~k~iVIKlGGs~l~~-~---~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~ 78 (300)
T 2buf_A 21 IRRFVGKTLVIKYGGNAMES-E---ELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRL 78 (300)
T ss_dssp HHHHTTCEEEEEECCTTTTS-S---HHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHT
T ss_pred HHHhcCCeEEEEECchhhCC-c---hHHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHc
Confidence 44567889999999986432 1 22333333333333444 7899987654443333
No 39
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=20.30 E-value=1.6e+02 Score=27.31 Aligned_cols=50 Identities=22% Similarity=0.366 Sum_probs=29.5
Q ss_pred HHHhhcCceEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHhcC----ccccchHHHHH
Q 018642 190 RLQMLSSRVAILKVGGATTAESRKKRKRATNALNAAKAAMEEG----IIPGGGVALLH 243 (352)
Q Consensus 190 Rl~~l~g~~atI~vgG~te~~l~E~er~i~DAl~a~k~a~~~g----vVpGGGaael~ 243 (352)
.+.++.++..+|++||+.-.. +..+......+....+.| +|.|||..-=.
T Consensus 43 yi~~~~~k~iVIKlGGs~l~~----~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i~~ 96 (321)
T 2v5h_A 43 YLQQFAGRTVVVKYGGAAMKQ----EELKEAVMRDIVFLACVGMRPVVVHGGGPEINA 96 (321)
T ss_dssp HHHHTTTCEEEEEECTHHHHS----HHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHH
T ss_pred HHHHhCCCeEEEEECchhhCC----chHHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 345677888999999975322 123333333333333444 78999875433
Done!