BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018645
(352 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 34/273 (12%)
Query: 58 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECV 114
G+R+G S+QG R EMED AV+ GL+ +SF AV+DGH G + L +
Sbjct: 23 GLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHIT 82
Query: 115 ------AALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFI 168
AA + G L + +K ++ F +D + N ++ D SG+TA + I
Sbjct: 83 TNEDFRAAGKSGSALE-LSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMI 141
Query: 169 GRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICG 228
++ + GD VL R G+ T H+P + +E RI+ AGG + R+ G
Sbjct: 142 SPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP-----CNPREKERIQNAGGSVMIQRVNG 196
Query: 229 DIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDA 288
+AVSRA GD +K KG E LV P+++++ +
Sbjct: 197 SLAVSRALGDYDYKCVDG----KGPTE---------------QLVSPEPEVYEILRAEED 237
Query: 289 EFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDV 321
EF++LA DG+WD M++ + ++V+++L+ D+
Sbjct: 238 EFIILAXDGIWDVMSNEELCEYVKSRLEVSDDL 270
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 58 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECV 114
G+R+G S+QG R EMED AVI GL+ +SF AV+DGH G K+ + L
Sbjct: 21 GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHIT 80
Query: 115 AALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILF 174
+ +K ++ F +D + E D SG+TA + I +
Sbjct: 81 NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTY 140
Query: 175 ISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSR 234
+ GD +L R K T H+P E RI+ AGG + R+ G +AVSR
Sbjct: 141 FINCGDSRGLLCRNRKVHFFTQDHKPSNP-----LEKERIQNAGGSVMIQRVNGSLAVSR 195
Query: 235 AFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS-DAEFVLL 293
A GD +K + KG E LV P++ + D +F++L
Sbjct: 196 ALGDFDYKC----VHGKGPTE---------------QLVSPEPEVHDIERSEEDDQFIIL 236
Query: 294 ASDGLWDYMNSSDAVKFVRNQLQQHGDV 321
A DG+WD M + + FVR++L+ D+
Sbjct: 237 ACDGIWDVMGNEELCDFVRSRLEVTDDL 264
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 58 GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECV 114
G+R+G S+QG R EMED AVI GL+ +SF AV+DGH G K+ + L
Sbjct: 21 GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHIT 80
Query: 115 AALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILF 174
+ +K ++ F +D + E D SG+TA + I +
Sbjct: 81 NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTY 140
Query: 175 ISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSR 234
+ GD +L R K T H+P E RI+ AGG + R+ G +AVSR
Sbjct: 141 FINCGDSRGLLCRNRKVHFFTQDHKPSNP-----LEKERIQNAGGSVMIQRVNGSLAVSR 195
Query: 235 AFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS-DAEFVLL 293
A GD +K + KG E LV P++ + D +F++L
Sbjct: 196 ALGDFDYKC----VHGKGPTE---------------QLVSPEPEVHDIERSEEDDQFIIL 236
Query: 294 ASDGLWDYMNSSDAVKFVRNQLQQHGDV 321
A DG+WD M + + FVR++L+ D+
Sbjct: 237 ACDGIWDVMGNEELCDFVRSRLEVTDDL 264
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 46/273 (16%)
Query: 62 GSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGL 121
GS S+QG R ED + D SF AV+DGHGG ++ L L+
Sbjct: 26 GSSSMQGWRISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLHL----PTFLKTVE 81
Query: 122 LLSGKDFDAIKKALQEAFENVDMKLLNRLEM-------------NAEE-DESGATATVMF 167
K+F+ KAL+EAF D LL + +AE +SG TA V
Sbjct: 82 AYGRKEFE---KALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVAL 138
Query: 168 IGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWIS-NGRI 226
+ L++++ GD V+ R GKA ++ H+P + E +RI +AGG ++ +GR+
Sbjct: 139 LHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDT-----VEYQRIEKAGGRVTLDGRV 193
Query: 227 CGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS 286
G + +SRA GD +K K+ + + ++ A PDI ++++G
Sbjct: 194 NGGLNLSRAIGDHGYKMNKS-------------------LPAEEQMISALPDIEKITVGP 234
Query: 287 DAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHG 319
+ EF++LA DG+W++M S V+FV+ ++ + G
Sbjct: 235 EDEFMVLACDGIWNFMTSEQVVQFVQERINKPG 267
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 115/281 (40%), Gaps = 63/281 (22%)
Query: 61 WGSVSLQGLREEMEDGA--------VIQSDGLDG-----------FSFAAVFDGHGGVST 101
+G S+ G R EMED V S LDG F V+DGHGG
Sbjct: 14 YGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQV 73
Query: 102 VKFLRDELYKECVAALQGGLLLSGKDF---DAIKKALQEAFENVDMKLLNRLEMNAEEDE 158
+ R+ ++ AL ++ +F D ++ ++A N M++ + +E A E
Sbjct: 74 ANYCRERMH----LALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAHAPE 129
Query: 159 S-GATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREA 217
+ G+T+ V + +F+++ GD VL R L+ H+P E RI A
Sbjct: 130 TVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRD-----DEAARIEAA 184
Query: 218 GGWI---SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVI 274
GG + + R+ G +A+SR+ GD K VI
Sbjct: 185 GGKVIRWNGARVFGVLAMSRSIGDRYLKPS----------------------------VI 216
Query: 275 ASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
P++ V + + ++LASDGLWD M + + R ++
Sbjct: 217 PDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRI 257
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 77/297 (25%)
Query: 61 WGSVSLQGLREEMEDGAVIQSDGL-----------DGFS---------FAAVFDGHGGVS 100
WG+VS+QG R EMED + L +G S F V+DGHGG
Sbjct: 29 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 88
Query: 101 TVKFLRDELY---KECVAALQGGLLL----SGKDFDAIKKALQEAFENVDMKLLNR---- 149
+ RD L+ E + ++ L G+ K F VD ++ +
Sbjct: 89 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQ-WDKVFTSCFLTVDGEIEGKIGRA 147
Query: 150 --------LEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPY 201
LE A E G+TA V + + +S+ GD VL R +A L+ H+P
Sbjct: 148 VVGSSDKVLEAVASE-TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 206
Query: 202 GSGQVSLQEIRRIREAGGWI---SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRW 258
E RI AGG + R+ G +A+SR+ GD
Sbjct: 207 RE-----DEYARIENAGGKVIQWQGARVFGVLAMSRSIGD-------------------- 241
Query: 259 SEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
+ K VI P++ + + E ++LASDGLWD MN+ + + R ++
Sbjct: 242 --------RYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRI 290
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 115/276 (41%), Gaps = 59/276 (21%)
Query: 61 WGSVSLQGLREEMEDGA-----VIQSDG---LDG-------FSFAAVFDGHGGVSTVKFL 105
+G S+ G R EMED +QS LDG F V+DGHGG +
Sbjct: 14 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 73
Query: 106 RDELY---KECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGAT 162
R+ ++ E +A + L + KKAL +F VD + +E A E G+T
Sbjct: 74 RERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVD----SEIESVAPE-TVGST 128
Query: 163 ATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWI- 221
+ V + +F+++ GD VL R A L+ H+P E RI AGG +
Sbjct: 129 SVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDRE-----DEAARIEAAGGKVI 183
Query: 222 --SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDI 279
+ R+ G +A+SR+ GD K +I P++
Sbjct: 184 QWNGARVFGVLAMSRSIGDRYLKPS----------------------------IIPDPEV 215
Query: 280 FQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
V + + ++LASDG+WD M +A + R ++
Sbjct: 216 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRI 251
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 77/297 (25%)
Query: 61 WGSVSLQGLREEMEDGAVIQSDGL-----------DGFS---------FAAVFDGHGGVS 100
WG+VS+QG R EMED + L +G S F V+DGHGG
Sbjct: 20 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 79
Query: 101 TVKFLRDELY---KECVAALQGGLLL----SGKDFDAIKKALQEAFENVDMKLLNR---- 149
+ RD L+ E + ++ L G+ K F VD ++ +
Sbjct: 80 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQ-WDKVFTSCFLTVDGEIEGKIGRA 138
Query: 150 --------LEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPY 201
LE A E G+TA V + + +S+ GD VL R +A L+ H+P
Sbjct: 139 VVGSSDKVLEAVASE-TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 197
Query: 202 GSGQVSLQEIRRIREAGGWI---SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRW 258
E RI AGG + R+ G +A+SR+ GD
Sbjct: 198 RE-----DEYARIENAGGKVIQWQGARVFGVLAMSRSIGD-------------------- 232
Query: 259 SEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
+ K VI P++ + + E ++LASDGLWD MN+ + + R ++
Sbjct: 233 --------RYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRI 281
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 77/297 (25%)
Query: 61 WGSVSLQGLREEMEDGAVIQSDGL-----------DGFS---------FAAVFDGHGGVS 100
WG+VS+QG R EMED + L +G S F V+DGHGG
Sbjct: 22 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 81
Query: 101 TVKFLRDELY---KECVAALQGGLLL----SGKDFDAIKKALQEAFENVDMKLLNR---- 149
+ RD L+ E + ++ L G+ K F VD ++ +
Sbjct: 82 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQ-WDKVFTSCFLTVDGEIEGKIGRA 140
Query: 150 --------LEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPY 201
LE A E G+TA V + + +S+ GD VL R +A L+ H+P
Sbjct: 141 VVGSSDKVLEAVASE-TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 199
Query: 202 GSGQVSLQEIRRIREAGGWI---SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRW 258
E RI AGG + R+ G +A+SR+ GD
Sbjct: 200 RE-----DEYARIENAGGKVIQWQGARVFGVLAMSRSIGD-------------------- 234
Query: 259 SEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
+ K VI P++ + + E ++LASDGLWD MN+ + + R ++
Sbjct: 235 --------RYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRI 283
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 77/297 (25%)
Query: 61 WGSVSLQGLREEMEDGAVIQSDGL-----------DGFS---------FAAVFDGHGGVS 100
WG+VS+QG R EMED + L +G S F V+DGHGG
Sbjct: 16 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 75
Query: 101 TVKFLRDELY---KECVAALQGGLLL----SGKDFDAIKKALQEAFENVDMKLLNR---- 149
+ RD L+ E + ++ L G+ K F VD ++ +
Sbjct: 76 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQ-WDKVFTSCFLTVDGEIEGKIGRA 134
Query: 150 --------LEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPY 201
LE A E G+TA V + + +S+ GD VL R +A L+ H+P
Sbjct: 135 VVGSSDKVLEAVASE-TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 193
Query: 202 GSGQVSLQEIRRIREAGGWI---SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRW 258
E RI AGG + R+ G +A+SR+ GD
Sbjct: 194 RE-----DEYARIENAGGKVIQWQGARVFGVLAMSRSIGD-------------------- 228
Query: 259 SEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
+ K VI P++ + + E ++LASDGLWD MN+ + + R ++
Sbjct: 229 --------RYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRI 277
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 77/297 (25%)
Query: 61 WGSVSLQGLREEMEDGAVIQSDGL-----------DGFS---------FAAVFDGHGGVS 100
WG+VS+QG R EMED + L +G S F V+DGHGG
Sbjct: 5 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 64
Query: 101 TVKFLRDELY---KECVAALQGGLLL----SGKDFDAIKKALQEAFENVDMKLLNR---- 149
+ RD L+ E + ++ L G+ K F VD ++ +
Sbjct: 65 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQ-WDKVFTSCFLTVDGEIEGKIGRA 123
Query: 150 --------LEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPY 201
LE A E G+TA V + + +S+ GD VL R +A L+ H+P
Sbjct: 124 VVGSSDKVLEAVASE-TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 182
Query: 202 GSGQVSLQEIRRIREAGGWI---SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRW 258
E RI AGG + R+ G +A+SR+ GD
Sbjct: 183 RE-----DEYARIENAGGKVIQWQGARVFGVLAMSRSIGD-------------------- 217
Query: 259 SEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
+ K VI P++ + + E ++LASDGLWD MN+ + + R ++
Sbjct: 218 --------RYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRI 266
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 115/276 (41%), Gaps = 59/276 (21%)
Query: 61 WGSVSLQGLREEMEDGA-----VIQSDG---LDG-------FSFAAVFDGHGGVSTVKFL 105
+G S+ G R EMED +QS LDG F V+DGHGG +
Sbjct: 26 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 85
Query: 106 RDELY---KECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGAT 162
R+ ++ E +A + L + KKAL +F VD + +E A E G+T
Sbjct: 86 RERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVD----SEIESVAPE-TVGST 140
Query: 163 ATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWI- 221
+ V + +F+++ GD VL R A L+ H+P E RI AGG +
Sbjct: 141 SVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDRE-----DEAARIEAAGGKVI 195
Query: 222 --SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDI 279
+ R+ G +A+SR+ GD K +I P++
Sbjct: 196 QWNGARVFGVLAMSRSIGDRYLKPS----------------------------IIPDPEV 227
Query: 280 FQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
V + + ++LASDG+WD M +A + R ++
Sbjct: 228 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRI 263
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 116/276 (42%), Gaps = 59/276 (21%)
Query: 61 WGSVSLQGLREEMEDGA-----VIQSDG---LDG-------FSFAAVFDGHGGVSTVKFL 105
+G S+ G R EMED +QS LDG F V+DGHGG +
Sbjct: 11 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 70
Query: 106 RDELYKECVAAL-QGGLLLSGKD--FDAIKKALQEAFENVDMKLLNRLEMNAEEDESGAT 162
R+ ++ + + +LS D + KKAL +F VD + +E A E G+T
Sbjct: 71 RERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVD----SEIESVAPE-TVGST 125
Query: 163 ATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWI- 221
+ V + +F+++ GD VL R A L+ H+P E RI AGG +
Sbjct: 126 SVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDRE-----DEAARIEAAGGKVI 180
Query: 222 --SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDI 279
+ R+ G +A+SR+ GD K +I P++
Sbjct: 181 QWNGARVFGVLAMSRSIGDRYLKPS----------------------------IIPDPEV 212
Query: 280 FQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
V + + ++LASDG+WD M +A + R ++
Sbjct: 213 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRI 248
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 77/297 (25%)
Query: 61 WGSVSLQGLREEMEDGAVIQSDGL-----------DGFS---------FAAVFDGHGGVS 100
WG+VS+QG R EMED + L +G S F V+DGHGG
Sbjct: 19 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 78
Query: 101 TVKFLRDELY---KECVAALQGGL----LLSGKDFDAIKKALQEAFENVDMKLLNR---- 149
+ RD L+ E + ++ L G+ K F VD ++ +
Sbjct: 79 VADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQ-WDKVFTSCFLTVDGEIEGKIGRA 137
Query: 150 --------LEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPY 201
LE A E G+TA V + + +S+ GD VL R +A L+ H+P
Sbjct: 138 VVGSSDKVLEAVASE-TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPD 196
Query: 202 GSGQVSLQEIRRIREAGGWI---SNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRW 258
E RI AGG + R+ G +A+SR+ GD
Sbjct: 197 RE-----DEYARIENAGGKVIQWQGARVFGVLAMSRSIGD-------------------- 231
Query: 259 SEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315
+ K VI P++ + + E ++LASDGLWD MN+ + + R ++
Sbjct: 232 --------RYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRI 280
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 50/259 (19%)
Query: 62 GSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGL 121
G S G R+E ED + D + AV+DGHGG + F + K C+ L
Sbjct: 125 GCASQIGKRKENEDRFDF-AQLTDEVLYFAVYDGHGGPAAADFCHTHMEK-CIM----DL 178
Query: 122 LLSGKDFDAIKKALQEAFENVDMKLLN--RLEMNAEEDESGATATVMFIGRDI-LFISHV 178
L K+ + + L AF +D + RL +A SG TATV + I L ++ V
Sbjct: 179 LPKEKNLETL---LTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASV 235
Query: 179 GDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWIS-----NGRICGDIAVS 233
GD +L R GK LT H P E RI++ GG+++ + G +A++
Sbjct: 236 GDSRAILCRKGKPMKLTIDHTPERK-----DEKERIKKCGGFVAWNSLGQPHVNGRLAMT 290
Query: 234 RAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSL-GSDAEFVL 292
R+ GD+ KT VIA P+ ++ L +D F++
Sbjct: 291 RSIGDLDLKTSG---------------------------VIAEPETKRIKLHHADDSFLV 323
Query: 293 LASDGLWDYMNSSDAVKFV 311
L +DG+ +NS + FV
Sbjct: 324 LTTDGINFMVNSQEICDFV 342
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 50/259 (19%)
Query: 62 GSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGL 121
G S G R+E ED + D + AV+DGHGG + F + K C+ L
Sbjct: 11 GCASQIGKRKENEDRFDF-AQLTDEVLYFAVYDGHGGPAAADFCHTHMEK-CIM----DL 64
Query: 122 LLSGKDFDAIKKALQEAFENVDMKLLN--RLEMNAEEDESGATATVMFIGRDI-LFISHV 178
L K+ + + L AF +D + RL +A SG TATV + I L ++ V
Sbjct: 65 LPKEKNLETL---LTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASV 121
Query: 179 GDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWIS-----NGRICGDIAVS 233
GD +L R GK LT H P E RI++ GG+++ + G +A++
Sbjct: 122 GDSRAILCRKGKPMKLTIDHTPERK-----DEKERIKKCGGFVAWNSLGQPHVNGRLAMT 176
Query: 234 RAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSL-GSDAEFVL 292
R+ GD+ KT VIA P+ ++ L +D F++
Sbjct: 177 RSIGDLDLKTSG---------------------------VIAEPETKRIKLHHADDSFLV 209
Query: 293 LASDGLWDYMNSSDAVKFV 311
L +DG+ +NS + FV
Sbjct: 210 LTTDGINFMVNSQEICDFV 228
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 159 SGATATVMFIGRDILFISHVGDCCVVL-----SRTGKADVLTNPHRPYGSGQVSLQEIRR 213
SGATA V + L +++ GD +L + A L+N H +V ++
Sbjct: 199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEH 258
Query: 214 IR-EAGGWISNGRICGDIAVSRAFGDIRFKTK---KNEMLKKG---VNEGRWSEKFVSRV 266
+ EA + R+ G + RAFGD++FK + +++ G +N+ ++ KF+
Sbjct: 259 PKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT-KFIPPN 317
Query: 267 QLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFV 311
+ A P++ L +F++LA+DGLW+ M+ D V+ V
Sbjct: 318 YYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 159 SGATATVMFIGRDILFISHVGDCCVVL-----SRTGKADVLTNPHRPYGSGQVSLQEIRR 213
SGATA V + L +++ GD +L + A L+N H ++ ++
Sbjct: 199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEH 258
Query: 214 IR-EAGGWISNGRICGDIAVSRAFGDIRFKTK---KNEMLKKG---VNEGRWSEKFVSRV 266
+ EA + R+ G + RAFGD++FK + +++ G +N+ ++ KF+
Sbjct: 259 PKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT-KFIPPN 317
Query: 267 QLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFV 311
+ A P++ L +F++LA+DGLW+ M+ D V+ V
Sbjct: 318 YHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 29/253 (11%)
Query: 83 GLDGFSFAAVFDGHGG---------VSTVKFLRDELYKECVAALQGGLLLSGKD---FDA 130
G D +F VFDG G + + + ++E L+ + + D
Sbjct: 49 GRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEXLRSDVPATEVDEKLPQL 108
Query: 131 IKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCV---VLSR 187
+ +A+ + ++N D +L+ E +D + +T+ + + + + H+GD + V +
Sbjct: 109 LDQAVDDXYKNADNELVKXCEQ-LNKDYASSTSVTAVLAKGFVAVGHLGDSRIAXGVETP 167
Query: 188 TG-KADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKN 246
G + LT H+P E RI GG + + R GD F+ +
Sbjct: 168 NGLNCEFLTVDHKPDXP-----HEKLRIXRNGGSVEYLHNHNNKPFIRG-GDFSFRKSRG 221
Query: 247 EMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSD 306
E + ++S F + L + PD+ V + +LA+DGLWD +++
Sbjct: 222 EQPX----QLQYSRAFGGK-DLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQ 276
Query: 307 AVKFVRNQLQQHG 319
AV+ + Q +Q G
Sbjct: 277 AVE-IAXQARQEG 288
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 194 LTNPHRPYGSGQVSLQEIRRIREAGGWISN---GRICGDIAVSRAFGDIRFKTKKN 246
L+ H+P + S RI +AGG + R+ G +A+SRAFGD FK N
Sbjct: 197 LSKDHKPNHPTEAS-----RIEKAGGSVETFDVPRVDGVLALSRAFGDSDFKXNPN 247
>pdb|1Q16|B Chain B, Crystal Structure Of Nitrate Reductase A, Narghi, From
Escherichia Coli
pdb|1R27|B Chain B, Crystal Structure Of Nargh Complex
pdb|1R27|D Chain D, Crystal Structure Of Nargh Complex
pdb|1SIW|B Chain B, Crystal Structure Of The Apomolybdo-Narghi
pdb|1Y5I|B Chain B, The Crystal Structure Of The Narghi Mutant Nari-K86a
pdb|1Y5L|B Chain B, The Crystal Structure Of The Narghi Mutant Nari-H66y
pdb|1Y5N|B Chain B, The Crystal Structure Of The Narghi Mutant Nari-K86a In
Complex With Pentachlorophenol
pdb|3IR5|B Chain B, Crystal Structure Of Narghi Mutant Narg-H49c
pdb|3IR6|B Chain B, Crystal Structure Of Narghi Mutant Narg-H49s
pdb|3IR7|B Chain B, Crystal Structure Of Narghi Mutant Narg-R94s
Length = 512
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 122 LLSGKDFDAIKKALQEAFENVDMKLLNRL 150
L K+FD I+KA+ FEN M L RL
Sbjct: 155 LAKDKNFDNIQKAMYSQFENTFMMYLPRL 183
>pdb|2AKO|A Chain A, Crystal Structure Of Glutamate 5-Kinase From Campylobacter
Jejuni
pdb|2AKO|B Chain B, Crystal Structure Of Glutamate 5-Kinase From Campylobacter
Jejuni
pdb|2AKO|C Chain C, Crystal Structure Of Glutamate 5-Kinase From Campylobacter
Jejuni
pdb|2AKO|D Chain D, Crystal Structure Of Glutamate 5-Kinase From Campylobacter
Jejuni
Length = 251
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 109 LYKECVAA---LQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATV 165
+Y E +A L G +LL+GKDFD+ +KA + A +D + + E+++ A +
Sbjct: 79 VYNELLAKFNKLGGQILLTGKDFDS-RKATKHAKNAIDXXINLGILPIINENDATAIEEI 137
Query: 166 MFIGRDIL--FISHV--GDCCVVLS 186
+F D L + +H D V+LS
Sbjct: 138 VFGDNDSLSAYATHFFDADLLVILS 162
>pdb|1Y4Z|B Chain B, The Crystal Structure Of Nitrate Reductase A, Narghi, In
Complex With The Q-Site Inhibitor Pentachlorophenol
Length = 512
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 122 LLSGKDFDAIKKALQEAFENVDMKLLNRL 150
L K+FD I+KA+ FEN M L RL
Sbjct: 155 LAKDKNFDNIQKAMYSQFENTFMMYLPRL 183
>pdb|3EGW|B Chain B, The Crystal Structure Of The Narghi Mutant Narh - C16a
Length = 509
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 122 LLSGKDFDAIKKALQEAFENVDMKLLNRL 150
L K+FD I+KA+ FEN M L RL
Sbjct: 155 LAKDKNFDNIQKAMYSQFENTFMMYLPRL 183
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 151 EMNAEEDESGATAT---VMFIGRDILFISHVGDCCVVLSRTGKADVLTNPH 198
E+ +D G T V +G +I+F +HVGD + + R G+ +LT+ H
Sbjct: 92 ELGQSDDYKGMGTTIEAVAIVGDNIIF-AHVGDSRIGIVRQGEYHLLTSDH 141
>pdb|1IBX|B Chain B, Nmr Structure Of Dff40 And Dff45 N-Terminal Domain Complex
Length = 145
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 268 LNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNS 304
L +D I D + + L S+ +FV LAS+ W Y NS
Sbjct: 108 LAEDGTIVDDDDYFLCLPSNTKFVALASNEKWAYNNS 144
>pdb|2GD4|I Chain I, Crystal Structure Of The Antithrombin-S195a Factor
Xa-Pentasaccharide Complex
pdb|2GD4|C Chain C, Crystal Structure Of The Antithrombin-S195a Factor
Xa-Pentasaccharide Complex
Length = 443
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 19/88 (21%)
Query: 85 DGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDM 144
DGFS G V +L+ +AL G++ G+D + A +AF
Sbjct: 338 DGFSLKEQLQDMGLV--------DLFSPAASAL-PGIVAEGRDDLYVSDAFHKAF----- 383
Query: 145 KLLNRLEMNAEEDESGATATVMFIGRDI 172
LE+N E E+ A+ V+ GR +
Sbjct: 384 -----LEVNEEGSEAAASTAVVIAGRSL 406
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,572,339
Number of Sequences: 62578
Number of extensions: 375159
Number of successful extensions: 1104
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1031
Number of HSP's gapped (non-prelim): 52
length of query: 352
length of database: 14,973,337
effective HSP length: 100
effective length of query: 252
effective length of database: 8,715,537
effective search space: 2196315324
effective search space used: 2196315324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)