Query 018646
Match_columns 352
No_of_seqs 341 out of 2111
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 02:50:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018646.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018646hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11498 bcsA cellulose syntha 100.0 2.7E-28 5.9E-33 260.7 24.7 187 142-350 190-378 (852)
2 TIGR03030 CelA cellulose synth 100.0 3.6E-27 7.8E-32 250.9 23.7 193 141-351 60-268 (713)
3 PRK11204 N-glycosyltransferase 99.9 5.6E-22 1.2E-26 198.2 22.0 121 219-349 52-172 (420)
4 PRK05454 glucosyltransferase M 99.9 4.7E-21 1E-25 202.3 25.7 173 172-350 78-259 (691)
5 PRK14583 hmsR N-glycosyltransf 99.9 2.4E-21 5.1E-26 196.0 22.5 121 219-349 73-193 (444)
6 TIGR03111 glyc2_xrt_Gpos1 puta 99.9 2.7E-21 5.9E-26 195.4 22.2 123 219-349 47-169 (439)
7 TIGR03472 HpnI hopanoid biosyn 99.9 3.8E-21 8.2E-26 190.3 19.8 124 219-348 39-162 (373)
8 cd06437 CESA_CaSu_A2 Cellulose 99.9 2.1E-21 4.5E-26 178.1 15.4 124 221-349 1-124 (232)
9 cd06427 CESA_like_2 CESA_like_ 99.8 2E-20 4.4E-25 173.1 15.1 121 221-348 1-122 (241)
10 cd06421 CESA_CelA_like CESA_Ce 99.8 2.3E-20 5E-25 169.8 14.2 122 221-350 1-123 (234)
11 cd02520 Glucosylceramide_synth 99.8 3.1E-20 6.7E-25 166.6 13.8 122 221-348 1-122 (196)
12 cd04191 Glucan_BSP_ModH Glucan 99.8 4.4E-20 9.5E-25 174.1 15.4 126 223-351 1-135 (254)
13 COG1215 Glycosyltransferases, 99.8 4.6E-19 1E-23 176.9 19.7 122 220-350 53-176 (439)
14 TIGR03469 HonB hopene-associat 99.8 9.4E-19 2E-23 174.0 16.9 123 219-347 38-168 (384)
15 cd06439 CESA_like_1 CESA_like_ 99.8 2.4E-18 5.2E-23 159.0 15.2 121 219-350 27-147 (251)
16 PF13641 Glyco_tranf_2_3: Glyc 99.8 9.7E-20 2.1E-24 165.8 4.5 122 221-350 1-124 (228)
17 cd06438 EpsO_like EpsO protein 99.8 2.7E-18 5.9E-23 152.2 13.4 114 225-348 1-116 (183)
18 cd06435 CESA_NdvC_like NdvC_li 99.8 3.8E-18 8.3E-23 156.3 14.7 119 224-349 1-121 (236)
19 PRK14716 bacteriophage N4 adso 99.8 3.3E-17 7.2E-22 167.8 19.5 169 170-349 18-193 (504)
20 cd04195 GT2_AmsE_like GT2_AmsE 99.8 1E-17 2.3E-22 149.3 13.9 115 224-349 1-118 (201)
21 cd04196 GT_2_like_d Subfamily 99.8 9.6E-18 2.1E-22 150.0 13.6 117 224-349 1-117 (214)
22 cd04184 GT2_RfbC_Mx_like Myxoc 99.8 1.7E-17 3.7E-22 147.8 15.1 119 221-349 1-121 (202)
23 cd04192 GT_2_like_e Subfamily 99.7 1.7E-17 3.7E-22 150.0 12.6 117 225-349 1-119 (229)
24 PRK10073 putative glycosyl tra 99.7 5.1E-17 1.1E-21 158.5 15.0 115 219-344 4-119 (328)
25 PTZ00260 dolichyl-phosphate be 99.7 3.3E-16 7.1E-21 153.2 20.3 127 219-349 68-202 (333)
26 PLN02726 dolichyl-phosphate be 99.7 7.5E-17 1.6E-21 149.7 14.8 122 219-349 7-130 (243)
27 cd06436 GlcNAc-1-P_transferase 99.7 5.1E-17 1.1E-21 145.6 12.9 115 225-349 1-126 (191)
28 cd06434 GT2_HAS Hyaluronan syn 99.7 7.9E-17 1.7E-21 147.1 12.9 113 222-349 1-114 (235)
29 PRK10018 putative glycosyl tra 99.7 1.8E-16 3.8E-21 151.6 15.4 120 219-348 3-122 (279)
30 PRK11234 nfrB bacteriophage N4 99.7 5E-16 1.1E-20 165.2 20.4 124 219-350 61-191 (727)
31 PF00535 Glycos_transf_2: Glyc 99.7 4.6E-17 1E-21 138.3 10.2 113 224-346 1-113 (169)
32 cd06423 CESA_like CESA_like is 99.7 2.1E-16 4.5E-21 134.2 13.1 117 225-350 1-117 (180)
33 cd04190 Chitin_synth_C C-termi 99.7 6.6E-17 1.4E-21 150.7 10.6 95 225-349 1-111 (244)
34 cd06433 GT_2_WfgS_like WfgS an 99.7 2.2E-16 4.8E-21 139.0 13.0 114 224-350 1-114 (202)
35 cd04185 GT_2_like_b Subfamily 99.7 3.6E-16 7.7E-21 139.9 12.8 117 225-350 1-117 (202)
36 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 4.7E-16 1E-20 148.8 13.8 113 224-342 1-114 (299)
37 cd02525 Succinoglycan_BP_ExoA 99.7 8.7E-16 1.9E-20 140.5 14.1 117 222-348 1-117 (249)
38 cd06913 beta3GnTL1_like Beta 1 99.7 1E-15 2.3E-20 139.1 14.4 112 225-341 1-114 (219)
39 cd06442 DPM1_like DPM1_like re 99.7 6.7E-16 1.4E-20 139.7 12.9 114 225-348 1-114 (224)
40 PRK13915 putative glucosyl-3-p 99.7 5.5E-16 1.2E-20 150.0 13.0 123 219-347 29-152 (306)
41 cd06420 GT2_Chondriotin_Pol_N 99.7 1.7E-15 3.8E-20 132.7 13.4 115 225-349 1-115 (182)
42 cd04188 DPG_synthase DPG_synth 99.6 1.3E-15 2.9E-20 137.6 12.2 115 225-346 1-117 (211)
43 PRK10063 putative glycosyl tra 99.6 3.6E-15 7.7E-20 140.0 14.8 115 221-347 1-118 (248)
44 cd04186 GT_2_like_c Subfamily 99.6 3.4E-15 7.3E-20 127.6 12.5 110 225-347 1-110 (166)
45 PLN02893 Cellulose synthase-li 99.6 1.2E-14 2.7E-19 152.5 19.1 134 218-351 98-342 (734)
46 PRK10714 undecaprenyl phosphat 99.6 6.6E-15 1.4E-19 143.6 15.6 113 220-341 5-120 (325)
47 cd04179 DPM_DPG-synthase_like 99.6 3.9E-15 8.5E-20 130.5 12.1 116 225-349 1-116 (185)
48 cd04187 DPM1_like_bac Bacteria 99.6 3.1E-14 6.7E-19 125.3 12.6 108 225-342 1-111 (181)
49 PRK15489 nfrB bacteriophage N4 99.6 1.5E-13 3.2E-18 145.2 19.7 122 219-348 69-197 (703)
50 cd02522 GT_2_like_a GT_2_like_ 99.6 4.7E-14 1E-18 127.3 13.4 100 223-339 1-100 (221)
51 COG0463 WcaA Glycosyltransfera 99.6 4.1E-14 9E-19 119.9 12.3 106 220-336 2-107 (291)
52 cd02511 Beta4Glucosyltransfera 99.6 6.9E-14 1.5E-18 128.9 14.0 105 222-345 1-105 (229)
53 cd02526 GT2_RfbF_like RfbF is 99.5 5.5E-14 1.2E-18 128.4 12.1 111 225-348 1-115 (237)
54 COG2943 MdoH Membrane glycosyl 99.5 8.8E-13 1.9E-17 132.2 18.3 166 173-347 102-276 (736)
55 PLN02190 cellulose synthase-li 99.5 6E-13 1.3E-17 139.6 17.3 133 219-351 91-331 (756)
56 cd00761 Glyco_tranf_GTA_type G 99.4 1.6E-12 3.6E-17 107.5 13.2 114 225-348 1-114 (156)
57 KOG2978 Dolichol-phosphate man 99.4 1.1E-12 2.4E-17 116.5 12.0 120 221-349 3-125 (238)
58 PLN02189 cellulose synthase 99.4 2.3E-12 5E-17 138.6 15.9 132 219-351 329-576 (1040)
59 PLN02195 cellulose synthase A 99.4 4.5E-12 9.7E-17 135.8 17.2 133 218-351 249-497 (977)
60 PLN02638 cellulose synthase A 99.4 7.8E-12 1.7E-16 135.0 17.7 133 218-351 346-594 (1079)
61 COG1216 Predicted glycosyltran 99.3 2.2E-11 4.8E-16 117.4 12.6 121 220-349 2-122 (305)
62 PLN02436 cellulose synthase A 99.3 1.2E-10 2.5E-15 125.8 17.0 133 218-351 362-610 (1094)
63 TIGR01556 rhamnosyltran L-rham 99.3 4.1E-11 8.8E-16 113.5 12.2 106 229-348 2-111 (281)
64 PLN02400 cellulose synthase 99.2 3E-10 6.5E-15 123.0 17.1 134 218-351 353-601 (1085)
65 PLN02248 cellulose synthase-li 99.2 3.9E-10 8.4E-15 122.1 16.4 68 284-351 587-662 (1135)
66 PF10111 Glyco_tranf_2_2: Glyc 99.2 4.2E-10 9.1E-15 107.4 14.4 109 224-341 1-121 (281)
67 PLN02915 cellulose synthase A 99.2 4.2E-10 9.2E-15 121.5 14.5 133 219-351 285-532 (1044)
68 KOG2547 Ceramide glucosyltrans 99.2 4.1E-10 8.9E-15 109.2 12.9 127 219-350 83-209 (431)
69 KOG2977 Glycosyltransferase [G 99.1 3.6E-09 7.8E-14 99.7 15.3 109 222-337 68-186 (323)
70 cd02514 GT13_GLCNAC-TI GT13_GL 99.0 3.5E-09 7.6E-14 103.6 13.0 116 223-348 2-137 (334)
71 PF03142 Chitin_synth_2: Chiti 98.7 8.8E-08 1.9E-12 98.7 12.8 129 219-348 23-238 (527)
72 PF03552 Cellulose_synt: Cellu 98.7 5.8E-08 1.3E-12 102.2 9.7 67 284-351 168-244 (720)
73 KOG3738 Predicted polypeptide 98.6 2.4E-07 5.2E-12 91.0 10.3 112 219-342 122-235 (559)
74 KOG3737 Predicted polypeptide 98.4 7.1E-07 1.5E-11 87.5 9.0 120 217-343 151-272 (603)
75 KOG3736 Polypeptide N-acetylga 98.4 4.4E-07 9.5E-12 94.1 6.5 115 219-341 140-256 (578)
76 PF13506 Glyco_transf_21: Glyc 98.3 2E-06 4.4E-11 76.8 7.4 65 283-350 5-69 (175)
77 PF13712 Glyco_tranf_2_5: Glyc 97.9 8.4E-05 1.8E-09 68.7 9.8 89 223-346 1-90 (217)
78 PF13704 Glyco_tranf_2_4: Glyc 97.7 0.00017 3.7E-09 57.4 7.7 85 230-326 1-86 (97)
79 PF03452 Anp1: Anp1; InterPro 97.6 0.00088 1.9E-08 63.8 12.6 117 219-335 23-167 (269)
80 PF03071 GNT-I: GNT-I family; 97.5 0.00042 9.2E-09 70.0 9.6 122 219-347 91-230 (434)
81 PRK14503 mannosyl-3-phosphogly 96.9 0.0076 1.6E-07 59.3 10.2 107 220-337 50-185 (393)
82 TIGR02460 osmo_MPGsynth mannos 96.9 0.0083 1.8E-07 58.7 10.3 107 220-337 49-184 (381)
83 PF09488 Osmo_MPGsynth: Mannos 96.8 0.0099 2.1E-07 58.4 10.2 106 220-336 49-183 (381)
84 KOG2571 Chitin synthase/hyalur 96.2 0.024 5.3E-07 61.6 9.6 39 310-348 439-477 (862)
85 PF11316 Rhamno_transf: Putati 96.2 0.057 1.2E-06 50.6 11.0 91 239-337 47-140 (234)
86 PRK14502 bifunctional mannosyl 96.2 0.036 7.9E-07 59.1 10.7 107 220-337 54-189 (694)
87 cd00218 GlcAT-I Beta1,3-glucur 95.3 0.28 6E-06 45.6 11.7 102 221-333 1-117 (223)
88 PLN02458 transferase, transfer 95.1 0.35 7.5E-06 47.3 12.0 104 219-332 110-223 (346)
89 PF05679 CHGN: Chondroitin N-a 95.0 0.2 4.4E-06 52.0 11.1 111 220-336 246-366 (499)
90 KOG1476 Beta-1,3-glucuronyltra 94.7 0.36 7.9E-06 46.8 11.0 101 220-331 86-201 (330)
91 PLN02917 CMP-KDO synthetase 94.2 1.6 3.6E-05 42.1 14.6 98 233-345 72-170 (293)
92 PF01644 Chitin_synth_1: Chiti 93.8 0.68 1.5E-05 41.0 10.0 52 282-336 109-163 (163)
93 KOG1413 N-acetylglucosaminyltr 93.5 0.68 1.5E-05 45.7 10.3 128 219-346 65-205 (411)
94 cd04182 GT_2_like_f GT_2_like_ 93.2 2 4.3E-05 37.2 12.1 96 231-341 24-121 (186)
95 PF12804 NTP_transf_3: MobA-li 92.8 1.3 2.8E-05 37.8 10.2 104 227-348 19-124 (160)
96 TIGR03310 matur_ygfJ molybdenu 92.3 3.3 7.2E-05 36.1 12.4 101 231-345 23-124 (188)
97 cd02540 GT2_GlmU_N_bac N-termi 92.3 2.6 5.6E-05 38.1 12.0 97 227-339 21-118 (229)
98 PF11735 CAP59_mtransfer: Cryp 92.2 2.8 6.1E-05 39.5 12.2 112 223-336 2-136 (241)
99 cd04181 NTP_transferase NTP_tr 91.7 2.3 5E-05 37.9 10.8 97 227-337 24-120 (217)
100 TIGR03202 pucB xanthine dehydr 91.1 5.7 0.00012 35.1 12.7 102 231-341 24-126 (190)
101 cd06422 NTP_transferase_like_1 90.8 3.3 7.2E-05 37.4 11.1 97 226-336 24-121 (221)
102 cd06915 NTP_transferase_WcbM_l 90.7 3.6 7.9E-05 36.7 11.1 98 227-338 24-121 (223)
103 PF06306 CgtA: Beta-1,4-N-acet 90.5 0.96 2.1E-05 44.2 7.4 105 220-332 86-196 (347)
104 PF09258 Glyco_transf_64: Glyc 90.3 0.92 2E-05 42.8 7.0 108 223-345 1-111 (247)
105 PRK13385 2-C-methyl-D-erythrit 90.3 4 8.6E-05 37.4 11.2 99 231-340 28-127 (230)
106 KOG4179 Lysyl hydrolase/glycos 90.0 0.66 1.4E-05 46.7 5.9 110 221-334 3-133 (568)
107 PRK14353 glmU bifunctional N-a 90.0 4.2 9.1E-05 41.1 12.0 106 226-345 27-133 (446)
108 TIGR03584 PseF pseudaminic aci 89.2 8.8 0.00019 35.3 12.6 95 231-338 22-122 (222)
109 TIGR01173 glmU UDP-N-acetylglu 89.0 5.5 0.00012 40.1 12.1 103 226-346 22-125 (451)
110 PRK05450 3-deoxy-manno-octulos 88.9 11 0.00024 34.5 13.2 97 227-339 22-119 (245)
111 cd04189 G1P_TT_long G1P_TT_lon 88.6 7.5 0.00016 35.3 11.7 107 226-345 25-131 (236)
112 TIGR00466 kdsB 3-deoxy-D-manno 88.3 10 0.00023 35.2 12.5 96 227-338 19-115 (238)
113 PRK13368 3-deoxy-manno-octulos 87.9 9 0.0002 34.9 11.8 91 233-340 27-118 (238)
114 PRK00317 mobA molybdopterin-gu 87.1 8.9 0.00019 33.9 10.9 91 231-341 28-119 (193)
115 cd02516 CDP-ME_synthetase CDP- 87.1 8.5 0.00018 34.5 10.9 102 227-340 23-125 (218)
116 PRK14352 glmU bifunctional N-a 86.8 12 0.00026 38.4 13.1 102 226-340 26-128 (482)
117 cd02503 MobA MobA catalyzes th 86.4 10 0.00023 32.9 10.9 85 231-336 24-109 (181)
118 PF05045 RgpF: Rhamnan synthes 85.5 19 0.00041 37.5 13.8 121 219-348 263-405 (498)
119 cd06425 M1P_guanylylT_B_like_N 85.5 10 0.00022 34.6 10.7 101 226-338 25-126 (233)
120 cd04183 GT2_BcE_like GT2_BcbE_ 85.5 15 0.00033 33.2 11.8 109 227-346 24-132 (231)
121 PF03214 RGP: Reversibly glyco 85.4 0.46 1E-05 46.5 1.7 109 221-339 8-119 (348)
122 cd02517 CMP-KDO-Synthetase CMP 84.9 22 0.00048 32.4 12.7 98 226-339 20-118 (239)
123 TIGR03552 F420_cofC 2-phospho- 84.9 16 0.00034 32.4 11.4 87 234-338 31-118 (195)
124 TIGR02665 molyb_mobA molybdopt 83.7 13 0.00029 32.4 10.3 90 231-338 25-115 (186)
125 cd06426 NTP_transferase_like_2 83.1 12 0.00026 33.5 9.9 105 227-346 24-129 (220)
126 PF00483 NTP_transferase: Nucl 82.2 8.7 0.00019 35.1 8.8 106 227-341 25-131 (248)
127 cd06428 M1P_guanylylT_A_like_N 82.2 19 0.00042 33.3 11.3 111 226-346 25-137 (257)
128 PRK14355 glmU bifunctional N-a 81.9 22 0.00048 36.1 12.4 99 226-339 25-124 (459)
129 cd02523 PC_cytidylyltransferas 81.8 9.2 0.0002 34.7 8.8 93 226-334 23-115 (229)
130 PF11051 Mannosyl_trans3: Mann 81.8 12 0.00026 35.6 9.8 23 309-331 88-112 (271)
131 PRK15480 glucose-1-phosphate t 81.0 22 0.00048 34.3 11.4 99 226-337 28-127 (292)
132 KOG3588 Chondroitin synthase 1 81.0 16 0.00035 36.6 10.4 108 219-335 227-337 (494)
133 cd02518 GT2_SpsF SpsF is a gly 80.7 31 0.00068 31.4 11.9 96 226-339 18-116 (233)
134 PF02348 CTP_transf_3: Cytidyl 80.2 29 0.00064 31.0 11.5 95 233-341 24-119 (217)
135 COG4092 Predicted glycosyltran 80.2 18 0.00038 34.9 10.0 107 221-333 2-116 (346)
136 PRK00155 ispD 2-C-methyl-D-ery 79.7 34 0.00075 30.9 11.8 96 231-340 29-125 (227)
137 PRK14356 glmU bifunctional N-a 79.2 27 0.0006 35.2 12.0 103 227-345 28-131 (456)
138 COG1213 Predicted sugar nucleo 79.1 3.5 7.6E-05 38.7 5.0 100 233-347 31-130 (239)
139 COG1208 GCD1 Nucleoside-diphos 78.7 17 0.00037 36.1 10.1 99 227-339 27-125 (358)
140 TIGR00454 conserved hypothetic 78.6 44 0.00095 29.8 11.9 95 227-339 22-117 (183)
141 PF01697 Glyco_transf_92: Glyc 78.0 15 0.00033 34.3 9.2 110 223-340 3-136 (285)
142 TIGR01105 galF UTP-glucose-1-p 78.0 41 0.00089 32.5 12.3 103 226-337 28-155 (297)
143 PF11397 GlcNAc: Glycosyltrans 77.9 14 0.00029 36.7 9.0 112 222-338 1-143 (343)
144 PF04666 Glyco_transf_54: N-Ac 77.5 44 0.00095 32.5 12.2 117 220-339 51-197 (297)
145 PRK14358 glmU bifunctional N-a 77.4 33 0.00071 35.3 12.1 100 226-341 29-129 (481)
146 PRK14360 glmU bifunctional N-a 75.8 39 0.00084 34.1 12.0 100 226-340 23-123 (450)
147 COG1212 KdsB CMP-2-keto-3-deox 74.9 76 0.0016 29.9 12.5 98 234-347 29-127 (247)
148 TIGR01207 rmlA glucose-1-phosp 74.7 53 0.0012 31.4 12.0 100 226-337 24-123 (286)
149 cd02513 CMP-NeuAc_Synthase CMP 74.1 55 0.0012 29.1 11.4 97 231-339 24-126 (223)
150 TIGR00453 ispD 2-C-methyl-D-er 73.9 61 0.0013 29.0 11.7 94 231-340 25-120 (217)
151 PF03360 Glyco_transf_43: Glyc 73.1 10 0.00022 35.0 6.2 73 253-332 11-98 (207)
152 cd02509 GDP-M1P_Guanylyltransf 73.1 53 0.0012 31.1 11.5 90 226-325 26-116 (274)
153 PRK02726 molybdopterin-guanine 72.7 45 0.00097 29.9 10.4 89 231-338 31-120 (200)
154 cd00505 Glyco_transf_8 Members 72.5 36 0.00077 31.5 10.0 116 225-345 3-128 (246)
155 PRK14354 glmU bifunctional N-a 71.7 58 0.0013 32.8 12.1 95 227-338 25-120 (458)
156 PRK14357 glmU bifunctional N-a 71.0 75 0.0016 32.0 12.7 102 226-346 22-125 (448)
157 cd02538 G1P_TT_short G1P_TT_sh 69.7 78 0.0017 28.8 11.5 98 227-337 26-124 (240)
158 cd06431 GT8_LARGE_C LARGE cata 69.5 44 0.00095 32.1 10.1 100 222-327 2-113 (280)
159 cd00899 b4GalT Beta-4-Galactos 69.5 11 0.00023 35.1 5.6 78 222-330 3-85 (219)
160 cd04194 GT8_A4GalT_like A4GalT 68.4 42 0.00092 30.9 9.5 91 234-327 13-111 (248)
161 cd02508 ADP_Glucose_PP ADP-glu 68.3 49 0.0011 29.4 9.6 107 226-339 23-137 (200)
162 cd02524 G1P_cytidylyltransfera 68.2 74 0.0016 29.4 11.2 102 226-338 23-143 (253)
163 TIGR01208 rmlA_long glucose-1- 67.4 64 0.0014 31.4 11.0 97 227-337 25-122 (353)
164 PF01762 Galactosyl_T: Galacto 67.0 23 0.0005 31.5 7.2 98 234-336 4-105 (195)
165 PRK09451 glmU bifunctional N-a 66.8 82 0.0018 31.9 12.0 103 226-346 27-130 (456)
166 cd04198 eIF-2B_gamma_N The N-t 66.4 73 0.0016 28.7 10.5 107 226-346 25-135 (214)
167 TIGR02623 G1P_cyt_trans glucos 66.2 90 0.0019 29.0 11.3 106 226-345 24-151 (254)
168 COG1209 RfbA dTDP-glucose pyro 65.9 71 0.0015 30.9 10.4 100 226-338 25-124 (286)
169 PLN02728 2-C-methyl-D-erythrit 65.7 95 0.0021 29.2 11.4 92 234-339 53-146 (252)
170 PF13733 Glyco_transf_7N: N-te 65.2 10 0.00022 32.6 4.2 77 220-327 46-127 (136)
171 PLN03180 reversibly glycosylat 63.4 5.3 0.00011 39.4 2.4 18 310-327 92-109 (346)
172 cd04197 eIF-2B_epsilon_N The N 61.8 1.1E+02 0.0023 27.5 10.7 103 226-338 25-129 (217)
173 COG0659 SUL1 Sulfate permease 61.4 2.2E+02 0.0048 30.1 16.9 49 234-287 460-512 (554)
174 cd02541 UGPase_prokaryotic Pro 60.2 90 0.0019 28.9 10.2 104 226-338 25-147 (267)
175 COG1861 SpsF Spore coat polysa 59.6 1E+02 0.0023 28.9 9.9 97 225-337 21-118 (241)
176 COG3967 DltE Short-chain dehyd 59.1 47 0.001 31.0 7.6 102 224-346 31-136 (245)
177 PRK09382 ispDF bifunctional 2- 57.6 1.4E+02 0.0029 30.1 11.4 92 231-338 31-123 (378)
178 PRK10122 GalU regulator GalF; 57.1 1.9E+02 0.004 27.8 12.5 104 226-338 28-156 (297)
179 PF09837 DUF2064: Uncharacteri 56.1 87 0.0019 26.1 8.3 43 296-339 45-88 (122)
180 COG2068 Uncharacterized MobA-r 54.4 1.8E+02 0.0038 26.8 11.4 96 231-339 29-125 (199)
181 PRK00844 glgC glucose-1-phosph 54.2 85 0.0018 31.4 9.4 103 226-337 30-141 (407)
182 PRK14359 glmU bifunctional N-a 53.7 1.9E+02 0.0042 28.7 11.9 91 227-334 25-116 (430)
183 PRK14489 putative bifunctional 52.2 1.4E+02 0.0031 29.6 10.5 41 296-339 80-121 (366)
184 PRK15171 lipopolysaccharide 1, 51.2 1.1E+02 0.0024 30.0 9.5 105 221-328 24-137 (334)
185 cd06432 GT8_HUGT1_C_like The C 48.1 1.7E+02 0.0038 27.3 9.9 98 232-333 12-116 (248)
186 TIGR01099 galU UTP-glucose-1-p 47.1 2.3E+02 0.005 26.0 11.0 104 226-338 25-147 (260)
187 PF03904 DUF334: Domain of unk 46.2 89 0.0019 29.2 7.3 27 99-125 151-177 (230)
188 PRK05293 glgC glucose-1-phosph 46.0 1.8E+02 0.0038 28.6 10.1 104 226-336 28-140 (380)
189 PF01128 IspD: 2-C-methyl-D-er 44.0 2.6E+02 0.0057 25.8 10.5 93 231-338 26-119 (221)
190 KOG1022 Acetylglucosaminyltran 43.9 1.1E+02 0.0025 32.2 8.3 113 219-346 441-556 (691)
191 PF13896 Glyco_transf_49: Glyc 43.0 24 0.00052 34.4 3.4 37 299-338 118-154 (317)
192 PF01501 Glyco_transf_8: Glyco 42.1 19 0.00042 32.3 2.4 44 228-271 4-49 (250)
193 PF09949 DUF2183: Uncharacteri 37.5 94 0.002 25.2 5.5 48 235-287 50-97 (100)
194 KOG2264 Exostosin EXT1L [Signa 37.4 64 0.0014 34.2 5.4 93 222-329 650-742 (907)
195 COG2266 GTP:adenosylcobinamide 37.0 2.6E+02 0.0057 25.2 8.6 90 227-337 22-112 (177)
196 TIGR02091 glgC glucose-1-phosp 37.0 1.5E+02 0.0033 28.8 8.0 103 226-337 23-135 (361)
197 COG0746 MobA Molybdopterin-gua 36.4 3.2E+02 0.007 24.6 10.0 90 230-340 26-116 (192)
198 PRK00725 glgC glucose-1-phosph 34.6 4.5E+02 0.0097 26.5 11.1 104 226-338 40-154 (425)
199 PF14097 SpoVAE: Stage V sporu 34.0 3.5E+02 0.0076 24.3 9.5 85 255-345 2-86 (180)
200 TIGR01479 GMP_PMI mannose-1-ph 31.2 3.6E+02 0.0079 27.7 9.9 99 227-335 27-128 (468)
201 PF15102 TMEM154: TMEM154 prot 30.7 37 0.0008 29.6 2.1 15 219-233 104-118 (146)
202 PF05060 MGAT2: N-acetylglucos 30.4 1.3E+02 0.0027 30.2 6.1 52 220-272 30-81 (356)
203 PF04724 Glyco_transf_17: Glyc 29.2 5.9E+02 0.013 25.4 12.2 117 221-343 79-209 (356)
204 PRK02862 glgC glucose-1-phosph 28.5 3.4E+02 0.0074 27.4 9.1 104 226-338 28-141 (429)
205 COG1207 GlmU N-acetylglucosami 28.4 6.8E+02 0.015 25.9 11.0 111 219-346 19-132 (460)
206 cd06430 GT8_like_2 GT8_like_2 28.2 5.7E+02 0.012 25.0 12.5 119 222-345 2-131 (304)
207 PHA02688 ORF059 IMV protein VP 28.0 1.1E+02 0.0023 30.1 5.0 41 310-351 115-156 (323)
208 COG5336 Uncharacterized protei 28.0 2.3E+02 0.0049 23.6 6.1 32 97-128 47-78 (116)
209 KOG3916 UDP-Gal:glucosylcerami 27.9 1.5E+02 0.0033 29.6 6.0 77 220-327 150-231 (372)
210 KOG1467 Translation initiation 27.7 1.8E+02 0.004 30.4 6.7 56 226-288 362-417 (556)
211 PF15609 PRTase_2: Phosphoribo 27.6 2.7E+02 0.006 25.4 7.3 65 254-320 123-189 (191)
212 PHA01631 hypothetical protein 26.2 50 0.0011 29.4 2.2 66 253-327 18-87 (176)
213 cd02507 eIF-2B_gamma_N_like Th 26.1 4.8E+02 0.01 23.3 9.2 97 226-333 25-123 (216)
214 PLN03133 beta-1,3-galactosyltr 25.9 7.5E+02 0.016 26.9 11.3 110 220-335 384-499 (636)
215 PF11119 DUF2633: Protein of u 25.2 1E+02 0.0022 22.7 3.3 35 32-66 1-35 (59)
216 PLN03181 glycosyltransferase; 25.2 3.6E+02 0.0078 27.8 8.2 62 264-327 148-215 (453)
217 COG0382 UbiA 4-hydroxybenzoate 24.9 6E+02 0.013 24.1 10.9 34 37-70 7-40 (289)
218 TIGR02092 glgD glucose-1-phosp 24.9 2.1E+02 0.0045 28.0 6.6 111 226-346 27-148 (369)
219 TIGR03501 gamma_C_targ gammapr 23.8 1E+02 0.0022 18.9 2.6 21 54-74 3-23 (26)
220 PF11181 YflT: Heat induced st 23.6 1.3E+02 0.0029 24.0 4.2 30 227-256 3-32 (103)
221 PF13768 VWA_3: von Willebrand 23.5 4.3E+02 0.0093 21.9 7.8 91 234-334 18-120 (155)
222 PF05637 Glyco_transf_34: gala 22.8 1.2E+02 0.0027 28.2 4.4 48 275-324 35-89 (239)
223 PRK00576 molybdopterin-guanine 22.8 4.9E+02 0.011 22.4 9.9 44 296-339 59-103 (178)
224 PLN03182 xyloglucan 6-xylosylt 22.1 5E+02 0.011 26.6 8.6 59 264-324 147-210 (429)
225 KOG0991 Replication factor C, 21.5 2.3E+02 0.0049 27.3 5.7 44 234-277 93-140 (333)
226 COG0041 PurE Phosphoribosylcar 20.7 6E+02 0.013 22.5 8.1 59 221-285 3-61 (162)
227 PRK13389 UTP--glucose-1-phosph 20.6 7.6E+02 0.016 23.7 11.8 103 226-338 33-161 (302)
228 PF14979 TMEM52: Transmembrane 20.4 4.2E+02 0.0091 23.2 6.6 31 220-250 61-91 (154)
229 cd06914 GT8_GNT1 GNT1 is a fun 20.3 4.7E+02 0.01 25.1 7.8 17 310-326 90-106 (278)
No 1
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.96 E-value=2.7e-28 Score=260.68 Aligned_cols=187 Identities=26% Similarity=0.410 Sum_probs=151.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccCCCCCC
Q 018646 142 LAIKGAFDLLYSSWVLVRVHYLAPPLQFLAN-ACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFF 220 (352)
Q Consensus 142 l~~~~~~~~~y~~W~~~r~~~~~p~l~~l~~-~~i~l~l~~~~~~l~l~l~~f~i~~~r~rp~~~~~~~~~~~~~~~~~~ 220 (352)
..++.+...+|++| |.+++++....+.. +.+.+++.+++..+.+.++++...++..|+.. +.+. ..+..
T Consensus 190 ~~l~~~~~~rY~~W---R~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~---~~~~----~~~~~ 259 (852)
T PRK11498 190 IVLSLTVSCRYIWW---RYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV---PLPK----DMSLW 259 (852)
T ss_pred HHHHHHHHHHHHHH---HHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC---CCCc----ccCCC
Confidence 45677789999999 99999997654333 33556677777777777777776655433211 1111 11257
Q ss_pred CeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHH
Q 018646 221 PMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (352)
Q Consensus 221 P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~a 299 (352)
|+|+|+||+|||+ +++++++.++++||||++++||+|+||+++|++.++++ +.+ +.++++++|.|+|++|
T Consensus 260 P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~-------~~~--v~yI~R~~n~~gKAGn 330 (852)
T PRK11498 260 PTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQ-------EVG--VKYIARPTHEHAKAGN 330 (852)
T ss_pred CcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHH-------HCC--cEEEEeCCCCcchHHH
Confidence 9999999999998 67899999999999999899999999999999988876 334 4566788888889999
Q ss_pred HHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 300 Ln~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
+|.|+++ ++||+|+++|||++++||+|++++++|.+||++|+||+|+.
T Consensus 331 LN~aL~~---a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~ 378 (852)
T PRK11498 331 INNALKY---AKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHH 378 (852)
T ss_pred HHHHHHh---CCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEccee
Confidence 9999996 79999999999999999999999999988999999999874
No 2
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.95 E-value=3.6e-27 Score=250.94 Aligned_cols=193 Identities=28% Similarity=0.326 Sum_probs=147.9
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhcchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccCCCCC
Q 018646 141 PLAIKGAFDLLYSSWVLVRVHYLAPPLQFLA-NACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGF 219 (352)
Q Consensus 141 ~l~~~~~~~~~y~~W~~~r~~~~~p~l~~l~-~~~i~l~l~~~~~~l~l~l~~f~i~~~r~rp~~~~~~~~~~~~~~~~~ 219 (352)
++.+..+...+|++| |.++++|.-..+. .+.+.+++.+.+..+...++++...++..|+.. +. + .+.+.
T Consensus 60 ~~~~~~~~~~~y~~w---r~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~-~~--~----~~~~~ 129 (713)
T TIGR03030 60 LLVLSVFISLRYLWW---RLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPV-PL--P----LDPEE 129 (713)
T ss_pred HHHHHHHHHHHHHHh---heeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcc-CC--C----CCccc
Confidence 467778889999999 9999999754443 344556667777677777777666544333221 11 1 11126
Q ss_pred CCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHH--------------HHHHHHHHHhhhcCCeE
Q 018646 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ--------------TLIKEEVLKWQEAGANI 284 (352)
Q Consensus 220 ~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~--------------~li~~~~~~~~~~~v~i 284 (352)
.|.|+|+||+|||+ +.+++|+.++++|+||.+++||+|+||+|+|.+. +..++.. .+. ++
T Consensus 130 ~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~---~~~--~v 204 (713)
T TIGR03030 130 WPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFC---RKL--GV 204 (713)
T ss_pred CCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHH---HHc--Cc
Confidence 79999999999998 5668899999999999888999999998877541 1122222 233 45
Q ss_pred EEeeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecccc
Q 018646 285 VYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESLM 351 (352)
Q Consensus 285 i~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~~ 351 (352)
.++.+++|.|+|++|+|.|+++ ++||+|+++|||++++||+|++++++|.+||++++||+++.+
T Consensus 205 ~yi~r~~n~~~KAgnLN~al~~---a~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f 268 (713)
T TIGR03030 205 NYITRPRNVHAKAGNINNALKH---TDGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFF 268 (713)
T ss_pred EEEECCCCCCCChHHHHHHHHh---cCCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeec
Confidence 5678888888899999999995 799999999999999999999999999889999999998753
No 3
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.89 E-value=5.6e-22 Score=198.24 Aligned_cols=121 Identities=20% Similarity=0.302 Sum_probs=107.7
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|+|+|+||+|||++.++++++|+.+|+||+ +||+|+||+|+|++.+.+++..+++ .++.+++..+|.| |++
T Consensus 52 ~~p~vsViIp~yne~~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~~~~----~~v~~i~~~~n~G-ka~ 124 (420)
T PRK11204 52 EYPGVSILVPCYNEGENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLAAQI----PRLRVIHLAENQG-KAN 124 (420)
T ss_pred CCCCEEEEEecCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHHHhC----CcEEEEEcCCCCC-HHH
Confidence 57899999999999999999999999999996 8999999999999988887665443 3456666677777 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
|+|.|+++ +++|+++++|+|+.++||+|++++..|+++|++++|+++.
T Consensus 125 aln~g~~~---a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~ 172 (420)
T PRK11204 125 ALNTGAAA---ARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNP 172 (420)
T ss_pred HHHHHHHH---cCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCc
Confidence 99999995 7999999999999999999999999998899999999754
No 4
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.88 E-value=4.7e-21 Score=202.34 Aligned_cols=173 Identities=18% Similarity=0.162 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccCCCCCCCeEEEEEeccCCc-----hhHHHHHHHHHcC
Q 018646 172 NACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEK-----EVYQQSIAAVCNL 246 (352)
Q Consensus 172 ~~~i~l~l~~~~~~l~l~l~~f~i~~~r~rp~~~~~~~~~~~~~~~~~~P~VsViIPayNE~-----~vl~~tL~sl~~q 246 (352)
.++.++|..+++......+|++.... ++.+.....+...+ ......|+|+|+||+|||+ +.++.+++|+.+|
T Consensus 78 ~lf~~~~~w~~~~~~~a~~g~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~ 154 (691)
T PRK05454 78 VLFALLFAWISLGFWTALMGFLQLLR-GRDKYSISASAAGD--PPPPPEARTAILMPIYNEDPARVFAGLRAMYESLAAT 154 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-cCCcccCCcccccC--CCCCCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhc
Confidence 34455556666655666666554422 22211111110011 1112578999999999999 3589999999999
Q ss_pred CCCCCeeEEEEEeCCCChhHHHHHH----HHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCC
Q 018646 247 DWPKSKILIQVLDDSDDPTAQTLIK----EEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADF 322 (352)
Q Consensus 247 dyP~~~leIiVvDDssdd~t~~li~----~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~ 322 (352)
+|+. +++++|+||++|+++....+ +..++++ .+.++.|++|.+|.|.|+||+|.++++. ..++||++++|||+
T Consensus 155 ~~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~-~~~~i~yr~R~~n~~~KaGNl~~~~~~~-~~~~eyivvLDADs 231 (691)
T PRK05454 155 GHGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELG-GEGRIFYRRRRRNVGRKAGNIADFCRRW-GGAYDYMVVLDADS 231 (691)
T ss_pred CCCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCCcEEEEECCcCCCccHHHHHHHHHhc-CCCcCEEEEEcCCC
Confidence 9985 69999999999998765332 2223332 2468889999999999999999999852 35789999999999
Q ss_pred CCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 323 QPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 323 ~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
++++|++.++++.|+.||++|+|||+..
T Consensus 232 ~m~~d~L~~lv~~m~~dP~vGlVQt~~~ 259 (691)
T PRK05454 232 LMSGDTLVRLVRLMEANPRAGLIQTLPV 259 (691)
T ss_pred CCCHHHHHHHHHHHhhCcCEEEEeCCcc
Confidence 9999999999999998999999999764
No 5
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.88 E-value=2.4e-21 Score=195.99 Aligned_cols=121 Identities=16% Similarity=0.174 Sum_probs=106.3
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|+|+||+|||++.++++++++++|+||+ +||+|+||+|+|.+.+.+++..++++ ++.+++...|.| |++
T Consensus 73 ~~p~vsViIP~yNE~~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~~~~----~v~vv~~~~n~G-ka~ 145 (444)
T PRK14583 73 GHPLVSILVPCFNEGLNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLAEDP----RLRVIHLAHNQG-KAI 145 (444)
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHHhCC----CEEEEEeCCCCC-HHH
Confidence 47899999999999999999999999999997 89999999999999888876655433 344445566667 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
|+|.|+++ +++|+++++|||++++||++++++.+|.++|++|+||++.
T Consensus 146 AlN~gl~~---a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~ 193 (444)
T PRK14583 146 ALRMGAAA---ARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNP 193 (444)
T ss_pred HHHHHHHh---CCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccc
Confidence 99999995 7999999999999999999999999998899999999864
No 6
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.88 E-value=2.7e-21 Score=195.38 Aligned_cols=123 Identities=18% Similarity=0.235 Sum_probs=106.0
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|+|+||+|||++.+.++++|+.+|+||.+++||+|+||+|+|++.+++++..++++ ++.+++ ...+.| |++
T Consensus 47 ~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~--~v~v~~--~~~~~G-ka~ 121 (439)
T TIGR03111 47 KLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFP--GLSLRY--MNSDQG-KAK 121 (439)
T ss_pred CCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCC--CeEEEE--eCCCCC-HHH
Confidence 579999999999999999999999999999998899999999999999888776654433 233332 334445 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
|+|.|+++ +++|+|+++|+|++++||++++++..|.+||+++++++..
T Consensus 122 AlN~gl~~---s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~ 169 (439)
T TIGR03111 122 ALNAAIYN---SIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVI 169 (439)
T ss_pred HHHHHHHH---ccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEE
Confidence 99999995 7899999999999999999999999999889999888753
No 7
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.87 E-value=3.8e-21 Score=190.35 Aligned_cols=124 Identities=20% Similarity=0.334 Sum_probs=105.0
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|||+||+|||++.++++|+|+++|+||+ +||+|+||++||.+.++++++.+++++..++++......+.++|.+
T Consensus 39 ~~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~ 116 (373)
T TIGR03472 39 AWPPVSVLKPLHGDEPELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRKVS 116 (373)
T ss_pred CCCCeEEEEECCCCChhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChHHH
Confidence 46899999999999999999999999999997 9999999999999988988887776654454442222223335889
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
|+++++++ +++|+++++|+|+.++||+|++++..|+ +|++++|++.
T Consensus 117 ~l~~~~~~---a~ge~i~~~DaD~~~~p~~L~~lv~~~~-~~~v~~V~~~ 162 (373)
T TIGR03472 117 NLINMLPH---ARHDILVIADSDISVGPDYLRQVVAPLA-DPDVGLVTCL 162 (373)
T ss_pred HHHHHHHh---ccCCEEEEECCCCCcChhHHHHHHHHhc-CCCcceEecc
Confidence 99998884 8999999999999999999999999997 6999999874
No 8
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.87 E-value=2.1e-21 Score=178.14 Aligned_cols=124 Identities=47% Similarity=0.714 Sum_probs=106.4
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHH
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aL 300 (352)
|.||||||+|||++.+.++|+|+++|+||.+.+||+|+|||+ |.+.+++++..+++...++++.++.+..+.|+|++++
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~s~-D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~ 79 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDST-DETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGAL 79 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEECCC-CcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHHH
Confidence 579999999999999999999999999998789999999955 5555666766666655567777777777778799999
Q ss_pred HHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 301 n~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
|.|++. +++|||+++|+|++++|++|+++...+. +|++++|+++.
T Consensus 80 n~g~~~---a~~~~i~~~DaD~~~~~~~l~~~~~~~~-~~~v~~v~~~~ 124 (232)
T cd06437 80 AEGMKV---AKGEYVAIFDADFVPPPDFLQKTPPYFA-DPKLGFVQTRW 124 (232)
T ss_pred HHHHHh---CCCCEEEEEcCCCCCChHHHHHhhhhhc-CCCeEEEecce
Confidence 999995 7999999999999999999999887776 69999999853
No 9
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.85 E-value=2e-20 Score=173.06 Aligned_cols=121 Identities=26% Similarity=0.370 Sum_probs=103.2
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHH
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aL 300 (352)
|.|||+||+|||++.+.++|+|+++|+||.+.+||+||||+|+|.+.++++++.. ....+++...+..+.| |+.++
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~---~~~~~i~~~~~~~~~G-~~~a~ 76 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRL---PSIFRVVVVPPSQPRT-KPKAC 76 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhcc---CCCeeEEEecCCCCCc-hHHHH
Confidence 6899999999999999999999999999977799999999999998888765421 1234555554445555 99999
Q ss_pred HHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC-CcEEEEEec
Q 018646 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT-KLIGFFLFE 348 (352)
Q Consensus 301 n~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d-p~vg~Vqtr 348 (352)
|.|+++ ++||||+++|+|++++|+++.+++..|.++ +++++++++
T Consensus 77 n~g~~~---a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~ 122 (241)
T cd06427 77 NYALAF---ARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAP 122 (241)
T ss_pred HHHHHh---cCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCc
Confidence 999995 799999999999999999999999999864 899999875
No 10
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.84 E-value=2.3e-20 Score=169.81 Aligned_cols=122 Identities=35% Similarity=0.520 Sum_probs=105.8
Q ss_pred CeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHH
Q 018646 221 PMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (352)
Q Consensus 221 P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~a 299 (352)
|.|+|+||+|||+ +.++++|+|+++|+||.+.++|+|+||+++|.+.++++++..++ ++.++....+.|+|+++
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 75 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-----GYRYLTRPDNRHAKAGN 75 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-----CceEEEeCCCCCCcHHH
Confidence 6899999999986 78999999999999998778999999999999998887654322 33444556667779999
Q ss_pred HHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 300 Ln~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
+|.|+++ +++|||+++|+|+.++|++|++++..|.++|++++|+++..
T Consensus 76 ~n~~~~~---a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~ 123 (234)
T cd06421 76 LNNALAH---TTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQF 123 (234)
T ss_pred HHHHHHh---CCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceE
Confidence 9999995 79999999999999999999999999998899999998754
No 11
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.84 E-value=3.1e-20 Score=166.65 Aligned_cols=122 Identities=21% Similarity=0.351 Sum_probs=101.0
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHH
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aL 300 (352)
|.|||+||+|||++.+.++|+|+.+|+||+ +||+||||+++|.+.++++++.+.++...++++...+..+.++|+.|+
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNL 78 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHH
Confidence 679999999999999999999999999998 999999999999998888877666553333333222222223478899
Q ss_pred HHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 301 n~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
|.|++. +++|+++++|+|+.++|++|++++.++. +|++++|++.
T Consensus 79 n~g~~~---a~~d~i~~~D~D~~~~~~~l~~l~~~~~-~~~~~~v~~~ 122 (196)
T cd02520 79 IKGYEE---ARYDILVISDSDISVPPDYLRRMVAPLM-DPGVGLVTCL 122 (196)
T ss_pred HHHHHh---CCCCEEEEECCCceEChhHHHHHHHHhh-CCCCCeEEee
Confidence 999995 7899999999999999999999999986 6899998874
No 12
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.84 E-value=4.4e-20 Score=174.11 Aligned_cols=126 Identities=20% Similarity=0.284 Sum_probs=104.6
Q ss_pred EEEEEeccCCch-hHHHHHHHHHc----CCCCCCeeEEEEEeCCCChhHHHHHH----HHHHHhhhcCCeEEEeeccCCC
Q 018646 223 VLVQIPMCNEKE-VYQQSIAAVCN----LDWPKSKILIQVLDDSDDPTAQTLIK----EEVLKWQEAGANIVYRHRILRD 293 (352)
Q Consensus 223 VsViIPayNE~~-vl~~tL~sl~~----qdyP~~~leIiVvDDssdd~t~~li~----~~~~~~~~~~v~ii~~~r~~~~ 293 (352)
|||+||+|||+. .+.++|.+.++ |+|++ ++||+|+||++|++.....+ +..+++++ ++++++.+|.++.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~-~~~v~~~~r~~~~ 78 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIWLAEEAAWLDLCEELGA-QGRIYYRRRRENT 78 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCCCC
Confidence 699999999994 58899988875 78733 39999999999987653222 23344443 7889999999999
Q ss_pred CchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecccc
Q 018646 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESLM 351 (352)
Q Consensus 294 G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~~ 351 (352)
|.|++|+|.++.. ..+++|+|+++|||++++||+|.+++++|..||++|+||+++.+
T Consensus 79 g~Kag~l~~~~~~-~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~ 135 (254)
T cd04191 79 GRKAGNIADFCRR-WGSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKL 135 (254)
T ss_pred CccHHHHHHHHHH-hCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCcee
Confidence 9999999999974 13688999999999999999999999999888999999999864
No 13
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=4.6e-19 Score=176.88 Aligned_cols=122 Identities=25% Similarity=0.403 Sum_probs=103.1
Q ss_pred CCeEEEEEeccCCch-hHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeec-cCCCCchH
Q 018646 220 FPMVLVQIPMCNEKE-VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHR-ILRDGYKA 297 (352)
Q Consensus 220 ~P~VsViIPayNE~~-vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r-~~~~G~Ka 297 (352)
.|.|+|+||+|||++ ++++++.++++||||. +||+|+||+++|++.+++++...++. ..+++. .. ..+.| |+
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~~~~~~~-~~~~~~--~~~~~~~g-K~ 126 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEELGAEYG-PNFRVI--YPEKKNGG-KA 126 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHHHHhhcC-cceEEE--eccccCcc-ch
Confidence 599999999999997 9999999999999998 89999999999999999987766543 123333 22 34444 99
Q ss_pred HHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 298 ~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
+++|.|+.. +++|+|+++|||+.++||+|+++++.|.+++..+++++++.
T Consensus 127 ~al~~~l~~---~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~ 176 (439)
T COG1215 127 GALNNGLKR---AKGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRI 176 (439)
T ss_pred HHHHHHHhh---cCCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCcee
Confidence 999999995 78999999999999999999999999997666668877753
No 14
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.80 E-value=9.4e-19 Score=173.95 Aligned_cols=123 Identities=16% Similarity=0.284 Sum_probs=100.0
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc---CCCCc
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI---LRDGY 295 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~---~~~G~ 295 (352)
..|+|||+||+|||++.++++|+|+.+|+||. .+||+|+||+|+|.|.+++++..++++.. .++++++.. .+.++
T Consensus 38 ~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~~~~~~-~~i~vi~~~~~~~g~~G 115 (384)
T TIGR03469 38 AWPAVVAVVPARNEADVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAARAYGRG-DRLTVVSGQPLPPGWSG 115 (384)
T ss_pred CCCCEEEEEecCCcHhHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHHhcCCC-CcEEEecCCCCCCCCcc
Confidence 57899999999999999999999999999995 48999999999999999998776554422 133334322 22335
Q ss_pred hHHHHHHHHhccCCCC-----ccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEe
Q 018646 296 KAGNLKSAMNCSYVKD-----YEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~-----gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
|..|+|.|+++ ++ +|+++++|+|+.++||++++++..+++ +++++|++
T Consensus 116 k~~A~n~g~~~---A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~-~~~~~vs~ 168 (384)
T TIGR03469 116 KLWAVSQGIAA---ARTLAPPADYLLLTDADIAHGPDNLARLVARARA-EGLDLVSL 168 (384)
T ss_pred hHHHHHHHHHH---HhccCCCCCEEEEECCCCCCChhHHHHHHHHHHh-CCCCEEEe
Confidence 99999999996 55 999999999999999999999999985 45555543
No 15
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.78 E-value=2.4e-18 Score=159.01 Aligned_cols=121 Identities=27% Similarity=0.381 Sum_probs=104.5
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|+++|+||+|||++.+.++|+++.+|+||.+.+||+|+||+++|.+.++++++.. . ++.++...++.| |++
T Consensus 27 ~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~----~--~v~~i~~~~~~g-~~~ 99 (251)
T cd06439 27 YLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYAD----K--GVKLLRFPERRG-KAA 99 (251)
T ss_pred CCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhh----C--cEEEEEcCCCCC-hHH
Confidence 578999999999999999999999999999987799999999999999888875432 2 344445666666 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
++|.|+++ +++|+|+++|+|++++|+++++++..+. +++++++++...
T Consensus 100 a~n~gi~~---a~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~ 147 (251)
T cd06439 100 ALNRALAL---ATGEIVVFTDANALLDPDALRLLVRHFA-DPSVGAVSGELV 147 (251)
T ss_pred HHHHHHHH---cCCCEEEEEccccCcCHHHHHHHHHHhc-CCCccEEEeEEE
Confidence 99999995 7889999999999999999999999997 588898887643
No 16
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.78 E-value=9.7e-20 Score=165.76 Aligned_cols=122 Identities=23% Similarity=0.418 Sum_probs=89.8
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCC--chHH
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG--YKAG 298 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G--~Ka~ 298 (352)
|+|+|+||+|||++.+.++|+|+++|+||+ ++|+|+||++++++.+.+++..+.++..+++++ .+..+.| +|+.
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi--~~~~~~g~~~k~~ 76 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAARYPRVRVRVI--RRPRNPGPGGKAR 76 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEE--E----HHHHHHHH
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHHHcCCCceEEe--ecCCCCCcchHHH
Confidence 679999999999999999999999999976 999999999888887777777777765444444 4444333 5999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
++|.|+++ .++|+|+++|+|++++|++|++++.+| ++|++++|+++.+
T Consensus 77 a~n~~~~~---~~~d~i~~lD~D~~~~p~~l~~~~~~~-~~~~~~~v~~~~~ 124 (228)
T PF13641_consen 77 ALNEALAA---ARGDYILFLDDDTVLDPDWLERLLAAF-ADPGVGAVGGPVF 124 (228)
T ss_dssp HHHHHHHH------SEEEEE-SSEEE-CHHHHHHHHHH-HBSS--EEEEEEE
T ss_pred HHHHHHHh---cCCCEEEEECCCcEECHHHHHHHHHHH-HhCCCCeEeeeEe
Confidence 99999996 689999999999999999999999999 5799999998764
No 17
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.78 E-value=2.7e-18 Score=152.21 Aligned_cols=114 Identities=25% Similarity=0.326 Sum_probs=92.8
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
|+||+|||++.+.++|+++++|+||.+.+||+|+||+|+|.|.+++++ .+..+.......+.| |+.++|.|+
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~-------~~~~~~~~~~~~~~g-k~~aln~g~ 72 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA-------AGATVLERHDPERRG-KGYALDFGF 72 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH-------cCCeEEEeCCCCCCC-HHHHHHHHH
Confidence 689999999999999999999999876799999999999999887763 334444433344555 999999999
Q ss_pred hccC--CCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 305 NCSY--VKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 305 ~~~~--~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
++.. .+++|+|+++|+|++++|+++.+++..|.++++ +|++.
T Consensus 73 ~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~~~~--~v~g~ 116 (183)
T cd06438 73 RHLLNLADDPDAVVVFDADNLVDPNALEELNARFAAGAR--VVQAY 116 (183)
T ss_pred HHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhhCCC--eeEEE
Confidence 8632 246999999999999999999999999986554 45543
No 18
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.78 E-value=3.8e-18 Score=156.26 Aligned_cols=119 Identities=28% Similarity=0.509 Sum_probs=96.7
Q ss_pred EEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhH-HHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHH
Q 018646 224 LVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (352)
Q Consensus 224 sViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t-~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn 301 (352)
||+||+|||+ +.++++++|+.+|+||. +||+|+||+++|.+ .+.+++..+++ +.++.++....+.|+|++++|
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~~~~~---~~~i~~i~~~~~~G~~~~a~n 75 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAHCAQL---GERFRFFHVEPLPGAKAGALN 75 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHHHHHh---CCcEEEEEcCCCCCCchHHHH
Confidence 6999999998 79999999999999997 88999999877765 34555544332 234445555666777899999
Q ss_pred HHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 302 ~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
.|+++. ..++|+|+++|+|++++|++|.+++..|+ +|++++|+++.
T Consensus 76 ~g~~~a-~~~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~ 121 (236)
T cd06435 76 YALERT-APDAEIIAVIDADYQVEPDWLKRLVPIFD-DPRVGFVQAPQ 121 (236)
T ss_pred HHHHhc-CCCCCEEEEEcCCCCcCHHHHHHHHHHhc-CCCeeEEecCc
Confidence 999962 13489999999999999999999999997 69999998764
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.76 E-value=3.3e-17 Score=167.82 Aligned_cols=169 Identities=16% Similarity=0.111 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccCCCCCCCeEEEEEeccCCchhHHHHHHHH-HcCCC
Q 018646 170 LANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAV-CNLDW 248 (352)
Q Consensus 170 l~~~~i~l~l~~~~~~l~l~l~~f~i~~~r~rp~~~~~~~~~~~~~~~~~~P~VsViIPayNE~~vl~~tL~sl-~~qdy 248 (352)
+..+..+++++.+++-+++-+.++.....|+..+...... ...+.. ..|+++|+||+|||+++|.++|+++ .+++|
T Consensus 18 ~~~~~~~~~~~~~~ddl~id~~y~~~~~~r~~~~~~~~~~-~~l~~~--~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY 94 (504)
T PRK14716 18 VLLVVAVLILLSGLDDLFIDAVYLARRLYRRRSRIPRLSL-ATLRSV--PEKRIAIFVPAWREADVIGRMLEHNLATLDY 94 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCh-hhcccC--CCCceEEEEeccCchhHHHHHHHHHHHcCCC
Confidence 3344455566666766666555543333222111111100 111122 5799999999999999999999996 57899
Q ss_pred CCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhcc---CC---CCccEEEEEcCCC
Q 018646 249 PKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCS---YV---KDYEFVAIFDADF 322 (352)
Q Consensus 249 P~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~---~~---a~gd~V~~lDAD~ 322 (352)
|+ ++|+|+||++||.|.+.+++..+++++ ++++...+ +++.+|++|+|.++++. .. .++|+|+++|||+
T Consensus 95 ~~--~eIiVv~d~ndd~T~~~v~~l~~~~p~--v~~vv~~~-~gp~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~ 169 (504)
T PRK14716 95 EN--YRIFVGTYPNDPATLREVDRLAARYPR--VHLVIVPH-DGPTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAED 169 (504)
T ss_pred CC--eEEEEEECCCChhHHHHHHHHHHHCCC--eEEEEeCC-CCCCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCC
Confidence 86 899999998888888888777666553 44444333 33345999999998752 11 2349999999999
Q ss_pred CCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 323 QPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 323 ~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
+++|++|+.+..++. +.++||.|.
T Consensus 170 ~v~Pd~Lr~~~~~~~---~~~~VQ~pv 193 (504)
T PRK14716 170 VIHPLELRLYNYLLP---RHDFVQLPV 193 (504)
T ss_pred CcCccHHHHHHhhcC---CCCEEecce
Confidence 999999998776653 456777764
No 20
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.76 E-value=1e-17 Score=149.27 Aligned_cols=115 Identities=14% Similarity=0.159 Sum_probs=98.0
Q ss_pred EEEEeccCCc--hhHHHHHHHHHcCCCCCCeeEEEEEeCCC-ChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHH
Q 018646 224 LVQIPMCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSD-DPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (352)
Q Consensus 224 sViIPayNE~--~vl~~tL~sl~~qdyP~~~leIiVvDDss-dd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aL 300 (352)
||+||+||++ +.++++|.|+.+|+|+. .||+|+||++ +|.+.++++.+.+++ + +.++..+.|.| +++++
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~~~~~---~--i~~i~~~~n~G-~~~a~ 72 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEFKRKL---P--LKVVPLEKNRG-LGKAL 72 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHHHhcC---C--eEEEEcCcccc-HHHHH
Confidence 6899999997 69999999999999996 7889888865 888888887665432 2 44555666767 99999
Q ss_pred HHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 301 n~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
|.|+++ +++|||+++|+|++++|+++++++..|.++|+++++++..
T Consensus 73 N~g~~~---a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~ 118 (201)
T cd04195 73 NEGLKH---CTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGV 118 (201)
T ss_pred HHHHHh---cCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccE
Confidence 999995 7999999999999999999999999999889999988764
No 21
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.76 E-value=9.6e-18 Score=150.05 Aligned_cols=117 Identities=19% Similarity=0.152 Sum_probs=101.0
Q ss_pred EEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHH
Q 018646 224 LVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 224 sViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
+|+||+||+++.+.++|.|+++|+||. +||+|+||+|+|.+.++++++..+++ ..+.+.....+.| +++++|.|
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~--~eiiVvddgS~d~t~~~~~~~~~~~~---~~~~~~~~~~~~G-~~~~~n~g 74 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKN--DELIISDDGSTDGTVEIIKEYIDKDP---FIIILIRNGKNLG-VARNFESL 74 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCCCcHHHHHHHHhcCC---ceEEEEeCCCCcc-HHHHHHHH
Confidence 689999999999999999999999995 99999999999999988887655433 3445555666666 99999999
Q ss_pred HhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 304 l~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
+.. +++|||+++|+|++++|++|.+++..+..+++.++++++.
T Consensus 75 ~~~---~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~ 117 (214)
T cd04196 75 LQA---ADGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDL 117 (214)
T ss_pred HHh---CCCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCc
Confidence 984 8999999999999999999999999977788988888764
No 22
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.76 E-value=1.7e-17 Score=147.78 Aligned_cols=119 Identities=19% Similarity=0.295 Sum_probs=98.3
Q ss_pred CeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCCh-hHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 221 PMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDP-TAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 221 P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd-~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
|+++|+||+||++ +.+++||+|+.+|+|+. ++|+|+||+++| ++.++.+.+..+ ..++.++..+.+.| ++.
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~~~~----~~~~~~~~~~~~~g-~~~ 73 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKYAAQ----DPRIKVVFREENGG-ISA 73 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHHHhc----CCCEEEEEcccCCC-HHH
Confidence 6799999999999 99999999999999997 899999998866 455555544322 22344455566666 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
++|.|+++ +++||++++|+|+.++|+++++++..+.++|++++|.+..
T Consensus 74 a~n~g~~~---a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 121 (202)
T cd04184 74 ATNSALEL---ATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDE 121 (202)
T ss_pred HHHHHHHh---hcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccH
Confidence 99999995 7899999999999999999999999997689998887643
No 23
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.74 E-value=1.7e-17 Score=149.98 Aligned_cols=117 Identities=20% Similarity=0.255 Sum_probs=94.7
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc--CCCCchHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--LRDGYKAGNLKS 302 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~--~~~G~Ka~aLn~ 302 (352)
|+||+|||++.++++|+|+++|+||.+.+||+|+||+|+|.+.++++ +..+.+ +.++.++... .+.| |+.++|.
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~-~~~~~~--~~~v~~~~~~~~~~~g-~~~a~n~ 76 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE-FAAAKP--NFQLKILNNSRVSISG-KKNALTT 76 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-HHHhCC--CcceEEeeccCcccch-hHHHHHH
Confidence 68999999999999999999999998779999999999999888776 333322 3344444443 3444 9999999
Q ss_pred HHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 303 al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
|+++ +++|||+++|+|+.++|++|++++..+.+ ++.++++++.
T Consensus 77 g~~~---~~~d~i~~~D~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~ 119 (229)
T cd04192 77 AIKA---AKGDWIVTTDADCVVPSNWLLTFVAFIQK-EQIGLVAGPV 119 (229)
T ss_pred HHHH---hcCCEEEEECCCcccCHHHHHHHHHHhhc-CCCcEEeeee
Confidence 9995 78999999999999999999999999885 4555555543
No 24
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.73 E-value=5.1e-17 Score=158.51 Aligned_cols=115 Identities=14% Similarity=0.212 Sum_probs=97.6
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|||+||+||+++.+++||+|+.+|+|++ +||+|+||||+|.+.++++++.++++ ++.+++. .|.| .+.
T Consensus 4 ~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~~~~~~~----~i~vi~~-~n~G-~~~ 75 (328)
T PRK10073 4 STPKLSIIIPLYNAGKDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKHYAENYP----HVRLLHQ-ANAG-VSV 75 (328)
T ss_pred CCCeEEEEEeccCCHHHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHHHHhhCC----CEEEEEC-CCCC-hHH
Confidence 35899999999999999999999999999987 99999999999999998887665433 4455543 5666 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC-CcEEE
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT-KLIGF 344 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d-p~vg~ 344 (352)
+.|.|+++ ++||||+|+|+|+.+.|+++++++..+.++ +++.+
T Consensus 76 arN~gl~~---a~g~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~ 119 (328)
T PRK10073 76 ARNTGLAV---ATGKYVAFPDADDVVYPTMYETLMTMALEDDLDVAQ 119 (328)
T ss_pred HHHHHHHh---CCCCEEEEECCCCccChhHHHHHHHHHHhCCCCEEE
Confidence 99999995 899999999999999999999999988743 34443
No 25
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.73 E-value=3.3e-16 Score=153.20 Aligned_cols=127 Identities=16% Similarity=0.154 Sum_probs=101.9
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcC------CCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCC
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNL------DWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR 292 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~q------dyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~ 292 (352)
..|.++|+||+|||++.++++++++.++ ..|...+||+||||+|+|.|.++++++.+++...+.++.++..+.|
T Consensus 68 ~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N 147 (333)
T PTZ00260 68 SDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN 147 (333)
T ss_pred CCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC
Confidence 5789999999999999999999988763 1333358999999999999999888776543112234555566777
Q ss_pred CCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc--CCcEEEEEecc
Q 018646 293 DGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV--TKLIGFFLFES 349 (352)
Q Consensus 293 ~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~--dp~vg~Vqtr~ 349 (352)
.| |++|+|.|+++ ++||+|+++|+|.+.+|+.+.+++..+.+ ++++++|.+.+
T Consensus 148 ~G-~~~A~~~Gi~~---a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR 202 (333)
T PTZ00260 148 KG-KGGAVRIGMLA---SRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSR 202 (333)
T ss_pred CC-hHHHHHHHHHH---ccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeec
Confidence 77 99999999995 78999999999999999999999999875 46777766643
No 26
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.72 E-value=7.5e-17 Score=149.71 Aligned_cols=122 Identities=19% Similarity=0.191 Sum_probs=99.8
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcC--CCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCch
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNL--DWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~q--dyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~K 296 (352)
..|.|+|+||+|||++.+..++.++.++ +++ .+||+|+||+|+|.|.++++++.+.++.. ++.++....+.| +
T Consensus 7 ~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~--~~eiivvDdgS~D~t~~i~~~~~~~~~~~--~v~~~~~~~n~G-~ 81 (243)
T PLN02726 7 GAMKYSIIVPTYNERLNIALIVYLIFKALQDVK--DFEIIVVDDGSPDGTQDVVKQLQKVYGED--RILLRPRPGKLG-L 81 (243)
T ss_pred CCceEEEEEccCCchhhHHHHHHHHHHHhccCC--CeEEEEEeCCCCCCHHHHHHHHHHhcCCC--cEEEEecCCCCC-H
Confidence 4689999999999999999999888653 343 48999999999999999888766544322 444455666677 9
Q ss_pred HHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 297 a~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
+.++|.|++. +++|+|+++|+|++++|++|.+++..+.+ ++.++|.+..
T Consensus 82 ~~a~n~g~~~---a~g~~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~g~r 130 (243)
T PLN02726 82 GTAYIHGLKH---ASGDFVVIMDADLSHHPKYLPSFIKKQRE-TGADIVTGTR 130 (243)
T ss_pred HHHHHHHHHH---cCCCEEEEEcCCCCCCHHHHHHHHHHHHh-cCCcEEEEcc
Confidence 9999999995 78999999999999999999999999975 5667776654
No 27
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.72 E-value=5.1e-17 Score=145.63 Aligned_cols=115 Identities=23% Similarity=0.344 Sum_probs=91.4
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeec--c-CCCCchHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHR--I-LRDGYKAGNLK 301 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r--~-~~~G~Ka~aLn 301 (352)
|+||+|||++++.++|+++.+|+ |. ++|+|+||+|+|.+.++++ .. ....++.++.+ . .+.| |++++|
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~~~~-~~----~~~~~v~~i~~~~~~~~~G-k~~aln 71 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAGIVR-LA----ITDSRVHLLRRHLPNARTG-KGDALN 71 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHHHHh-he----ecCCcEEEEeccCCcCCCC-HHHHHH
Confidence 68999999999999999999998 65 8999999999999988876 21 11123334433 2 3445 999999
Q ss_pred HHHhccC--------CCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 302 SAMNCSY--------VKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 302 ~al~~~~--------~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
.|+++.. ..++|+|+++|+|++++|++|+++...|. +|+++++|++.
T Consensus 72 ~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~~-~~~v~~v~~~~ 126 (191)
T cd06436 72 AAYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYFS-DPRVAGTQSRV 126 (191)
T ss_pred HHHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhhc-CCceEEEeeeE
Confidence 9998631 11358999999999999999999888887 79999998864
No 28
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.71 E-value=7.9e-17 Score=147.05 Aligned_cols=113 Identities=20% Similarity=0.314 Sum_probs=94.0
Q ss_pred eEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHH
Q 018646 222 MVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (352)
Q Consensus 222 ~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aL 300 (352)
.|+|+||+|||+ +.+.+||+++.+|+ | .+|+|+||+++|.+.+.+++. .....+.+. ...+.| |++++
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~-----~~~~~~~v~-~~~~~g-~~~a~ 69 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQT-----VKYGGIFVI-TVPHPG-KRRAL 69 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhh-----ccCCcEEEE-ecCCCC-hHHHH
Confidence 489999999999 99999999999998 3 689999999888887765322 112233333 445566 99999
Q ss_pred HHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 301 n~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
|.|+++ +++|+|+++|+|+.++|++|++++..|. +|++++|+++.
T Consensus 70 n~g~~~---a~~d~v~~lD~D~~~~~~~l~~l~~~~~-~~~v~~v~~~~ 114 (235)
T cd06434 70 AEGIRH---VTTDIVVLLDSDTVWPPNALPEMLKPFE-DPKVGGVGTNQ 114 (235)
T ss_pred HHHHHH---hCCCEEEEECCCceeChhHHHHHHHhcc-CCCEeEEcCce
Confidence 999995 7999999999999999999999999999 79999998764
No 29
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.71 E-value=1.8e-16 Score=151.60 Aligned_cols=120 Identities=18% Similarity=0.251 Sum_probs=98.3
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|||+||+||+++.+.++|+|+++|+||+ +||+|+||+|++ .+.++++.+.+. +.++.++..+.+.| .+.
T Consensus 3 ~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~~~~~--~~ri~~i~~~~n~G-~~~ 75 (279)
T PRK10018 3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYVTALN--DPRITYIHNDINSG-ACA 75 (279)
T ss_pred CCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHHHHcC--CCCEEEEECCCCCC-HHH
Confidence 46899999999999999999999999999997 999999998874 233444444332 34566667777777 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
++|.|++. ++||||+++|+|+.+.|+.|+.++.++.+.+..+++.+.
T Consensus 76 a~N~gi~~---a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~ 122 (279)
T PRK10018 76 VRNQAIML---AQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYAN 122 (279)
T ss_pred HHHHHHHH---cCCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEcc
Confidence 99999995 899999999999999999999999998765665555543
No 30
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.71 E-value=5e-16 Score=165.16 Aligned_cols=124 Identities=17% Similarity=0.133 Sum_probs=100.3
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHH-cCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVC-NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~-~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka 297 (352)
+.|+|+|+||+|||+.++.+++++++ +|+||+ ++|++++|.+|+.|.+.+++..+++++ ++++...+..++| |+
T Consensus 61 ~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~~~~p~--~~~v~~~~~g~~g-Ka 135 (727)
T PRK11234 61 DEKPLAIMVPAWNETGVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVCARFPN--VHKVVCARPGPTS-KA 135 (727)
T ss_pred CCCCEEEEEecCcchhhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHHHHCCC--cEEEEeCCCCCCC-HH
Confidence 67999999999999999999999987 799998 899999988888888888888776653 4545454544445 99
Q ss_pred HHHHHHHhccC------CCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 298 GNLKSAMNCSY------VKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 298 ~aLn~al~~~~------~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
+|+|.++.... ..++++++++|||++++||+|+ ++.++.+ +. ++||++..
T Consensus 136 ~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l~~-~~-~~VQ~p~~ 191 (727)
T PRK11234 136 DCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYLVE-RK-DLIQIPVY 191 (727)
T ss_pred HHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhhcC-CC-CeEeeccc
Confidence 99999998530 1245789999999999999998 6777763 55 99998753
No 31
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.71 E-value=4.6e-17 Score=138.26 Aligned_cols=113 Identities=20% Similarity=0.249 Sum_probs=92.8
Q ss_pred EEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHH
Q 018646 224 LVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 224 sViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
||+||+||+.+.+.++|.|+.+|+++. .||+|+||+++|.+.++++++.+ .+.++.+++.+.+.| ++.++|.|
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~----~~~~i~~i~~~~n~g-~~~~~n~~ 73 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE----SDPNIRYIRNPENLG-FSAARNRG 73 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC----CSTTEEEEEHCCCSH-HHHHHHHH
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc----ccccccccccccccc-cccccccc
Confidence 799999999999999999999997665 89999999999999888876543 355677778887776 99999999
Q ss_pred HhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 018646 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 304 l~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
+++ ++++|++++|+|+.++|++|++++..+.+++...+++
T Consensus 74 ~~~---a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~ 113 (169)
T PF00535_consen 74 IKH---AKGEYILFLDDDDIISPDWLEELVEALEKNPPDVVIG 113 (169)
T ss_dssp HHH-----SSEEEEEETTEEE-TTHHHHHHHHHHHCTTEEEEE
T ss_pred ccc---cceeEEEEeCCCceEcHHHHHHHHHHHHhCCCcEEEE
Confidence 996 8999999999999999999999999999855544333
No 32
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.70 E-value=2.1e-16 Score=134.16 Aligned_cols=117 Identities=25% Similarity=0.379 Sum_probs=98.2
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
|+||+||+++.+.++|.++.+|.++. ++|+|+||+++|.+.+.++++.... ...+.++....+.| ++.++|.|+
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~~~~---~~~~~~~~~~~~~g-~~~~~n~~~ 74 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELAALY---IRRVLVVRDKENGG-KAGALNAGL 74 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHhccc---cceEEEEEecccCC-chHHHHHHH
Confidence 68999999999999999999999976 8899999999998888776543322 12344555666666 999999999
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
+. +++|+|+++|+|..++|+++++++..+.++++++++++...
T Consensus 75 ~~---~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 117 (180)
T cd06423 75 RH---AKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVR 117 (180)
T ss_pred Hh---cCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEE
Confidence 95 69999999999999999999999777777899999887653
No 33
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.70 E-value=6.6e-17 Score=150.70 Aligned_cols=95 Identities=25% Similarity=0.295 Sum_probs=81.7
Q ss_pred EEEeccCCc-hhHHHHHHHHHcCCCC--------CCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCc
Q 018646 225 VQIPMCNEK-EVYQQSIAAVCNLDWP--------KSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (352)
Q Consensus 225 ViIPayNE~-~vl~~tL~sl~~qdyP--------~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~ 295 (352)
|+||+|||+ .+++++|+|+++|+|| .+++||+|+||+++| .+.|
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d--------------------------~~~g- 53 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK--------------------------KNRG- 53 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc--------------------------ccCc-
Confidence 689999997 7999999999999999 678999999998888 1233
Q ss_pred hHH-------HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 296 KAG-------NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 296 Ka~-------aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
|.. ++|.++. .+++|+|+++|+|++++||+|++++.+|..+|++|+|+++.
T Consensus 54 k~~~~~~~~~~~~~~~~---~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~ 111 (244)
T cd04190 54 KRDSQLWFFNYFCRVLF---PDDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEI 111 (244)
T ss_pred chHHHHHHHHHHHHHhh---cCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeee
Confidence 443 3455555 47999999999999999999999999998789999999875
No 34
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.69 E-value=2.2e-16 Score=139.01 Aligned_cols=114 Identities=18% Similarity=0.223 Sum_probs=96.8
Q ss_pred EEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHH
Q 018646 224 LVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 224 sViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
||+||+||+++.++++|.|+.+|++|+ +||+|+||+|+|.+.+.++++.. . ++++....+.| ++.++|.|
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~~~----~---~~~~~~~~~~g-~~~a~n~~ 70 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKYED----K---ITYWISEPDKG-IYDAMNKG 70 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHhHh----h---cEEEEecCCcC-HHHHHHHH
Confidence 689999999999999999999999997 89999999999999888775432 1 22333455556 99999999
Q ss_pred HhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 304 l~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
+++ +++|||+++|+|+++.++++.+++..+..+++.++|.++..
T Consensus 71 ~~~---a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~ 114 (202)
T cd06433 71 IAL---ATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVL 114 (202)
T ss_pred HHH---cCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeE
Confidence 995 78999999999999999999999988877899988887653
No 35
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.68 E-value=3.6e-16 Score=139.87 Aligned_cols=117 Identities=20% Similarity=0.252 Sum_probs=97.5
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
|+||+||+++.+.++|.|+.+|++|. .||+|+||+|+|.+.+++++.... .++.+++.+.+.| .+.++|.|+
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~~~-----~~i~~~~~~~n~g-~~~~~n~~~ 72 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLGDL-----DNIVYLRLPENLG-GAGGFYEGV 72 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhcCC-----CceEEEECccccc-hhhHHHHHH
Confidence 68999999999999999999999996 789999999999998888754321 2245566667777 788888888
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
+....+++|+++++|+|++++|+++++++..+. +|+++++.+..+
T Consensus 73 ~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~~-~~~~~~~~~~~~ 117 (202)
T cd04185 73 RRAYELGYDWIWLMDDDAIPDPDALEKLLAYAD-KDNPQFLAPLVL 117 (202)
T ss_pred HHHhccCCCEEEEeCCCCCcChHHHHHHHHHHh-cCCceEecceeE
Confidence 754345899999999999999999999999998 789998887554
No 36
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.68 E-value=4.7e-16 Score=148.78 Aligned_cols=113 Identities=18% Similarity=0.164 Sum_probs=94.1
Q ss_pred EEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHH
Q 018646 224 LVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKS 302 (352)
Q Consensus 224 sViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~ 302 (352)
|||||+|||. +.+.+||+|+.+|+++....|||||||+|+|.+.+.+.+.... ....++.++..+.+.| .+.+.|.
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~--~~~~~v~vi~~~~n~G-~~~a~N~ 77 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYK--KYLPKVKVLRLKKREG-LIRARIA 77 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHh--hcCCcEEEEEcCCCCC-HHHHHHH
Confidence 6999999999 9999999999999988645699999999888887766542211 2223455566677777 9999999
Q ss_pred HHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcE
Q 018646 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLI 342 (352)
Q Consensus 303 al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~v 342 (352)
|+++ ++||||+++|+|+.++|+||++++..+.++|..
T Consensus 78 g~~~---A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~ 114 (299)
T cd02510 78 GARA---ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKT 114 (299)
T ss_pred HHHH---ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCe
Confidence 9995 899999999999999999999999999987765
No 37
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.67 E-value=8.7e-16 Score=140.50 Aligned_cols=117 Identities=18% Similarity=0.198 Sum_probs=97.3
Q ss_pred eEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHH
Q 018646 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (352)
Q Consensus 222 ~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn 301 (352)
+++|+||+||+++.+.++|.++.+|+||...++|+|+||+++|.+.+.++.+.++ ...+.++... +.| ++.++|
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~----~~~v~~i~~~-~~~-~~~a~N 74 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAK----DPRIRLIDNP-KRI-QSAGLN 74 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhc----CCeEEEEeCC-CCC-chHHHH
Confidence 4899999999999999999999999998557899999999999998888765433 3345555443 445 889999
Q ss_pred HHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 302 ~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
.|++. +++|+++++|+|+.++|++|++++..+.+ ++..++++.
T Consensus 75 ~g~~~---a~~d~v~~lD~D~~~~~~~l~~~~~~~~~-~~~~~v~~~ 117 (249)
T cd02525 75 IGIRN---SRGDIIIRVDAHAVYPKDYILELVEALKR-TGADNVGGP 117 (249)
T ss_pred HHHHH---hCCCEEEEECCCccCCHHHHHHHHHHHhc-CCCCEEecc
Confidence 99995 79999999999999999999999998875 666666654
No 38
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.67 E-value=1e-15 Score=139.08 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=92.9
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeec--cCCCCchHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHR--ILRDGYKAGNLKS 302 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r--~~~~G~Ka~aLn~ 302 (352)
|+||+||+++.++++|+|+.+|+||. .+||+|+||+|+|.+.++++++.++.+..+++++.... ..+.| .+.++|.
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~a~N~ 78 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKG-VGYAKNQ 78 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCcc-HHHHHHH
Confidence 68999999999999999999999984 59999999999999998888876655444455443322 22345 8889999
Q ss_pred HHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCc
Q 018646 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 303 al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~ 341 (352)
|++. ++|||++++|+|+.++|+++++++..+.++|+
T Consensus 79 g~~~---a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~ 114 (219)
T cd06913 79 AIAQ---SSGRYLCFLDSDDVMMPQRIRLQYEAALQHPN 114 (219)
T ss_pred HHHh---cCCCEEEEECCCccCChhHHHHHHHHHHhCCC
Confidence 9995 89999999999999999999999988877665
No 39
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.67 E-value=6.7e-16 Score=139.70 Aligned_cols=114 Identities=15% Similarity=0.186 Sum_probs=93.5
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
|+||+|||++.+.++|+++.+|.++ ..+||+||||+|+|.+.++++++.++. .++.++....+.| ++.++|.|+
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~~~~~~----~~i~~~~~~~n~G-~~~a~n~g~ 74 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRELAKEY----PRVRLIVRPGKRG-LGSAYIEGF 74 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHHHHHhC----CceEEEecCCCCC-hHHHHHHHH
Confidence 6899999999999999999999982 249999999999999888887665432 2334555667767 999999999
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
++ +++|+|+++|+|++++|++++.++..+.+ ++.++|.+.
T Consensus 75 ~~---a~gd~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~g~ 114 (224)
T cd06442 75 KA---ARGDVIVVMDADLSHPPEYIPELLEAQLE-GGADLVIGS 114 (224)
T ss_pred HH---cCCCEEEEEECCCCCCHHHHHHHHHHHhc-CCCCEEEEe
Confidence 95 78999999999999999999999999754 455555554
No 40
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.67 E-value=5.5e-16 Score=150.02 Aligned_cols=123 Identities=16% Similarity=0.119 Sum_probs=96.7
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.++|+||+|||++.+.++|.++.+|.++....||+|+||+|+|.|.+++++.....-.. ..+. .....+.| |+.
T Consensus 29 ~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~-~~~~-~~~~~n~G-kg~ 105 (306)
T PRK13915 29 AGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSR-EEIL-PELPPRPG-KGE 105 (306)
T ss_pred CCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcc-hhhh-hccccCCC-HHH
Confidence 56899999999999999999999999886522247899999999999988887542111000 0111 01234556 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCCcEEEEEe
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
|+|.|+.. +++|+|+++|+|++ ++|+++.+++..+..+|++++|.+
T Consensus 106 A~~~g~~~---a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g 152 (306)
T PRK13915 106 ALWRSLAA---TTGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKA 152 (306)
T ss_pred HHHHHHHh---cCCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEE
Confidence 99999994 78999999999997 899999999999987799998876
No 41
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.65 E-value=1.7e-15 Score=132.65 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=92.0
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
|+||+||+++.++++|.|+.+|+|++ +||+|+||+++|.+.++++.+.++. ..+++.+.+.+...++++++|.|+
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~n~g~ 75 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFKSQF---PIPIKHVWQEDEGFRKAKIRNKAI 75 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHHhhc---CCceEEEEcCCcchhHHHHHHHHH
Confidence 68999999999999999999999887 8899999999999988887654432 223333333333224889999999
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
+. +++|+|+++|+|+.++|++|++++..+ +++++++.++.
T Consensus 76 ~~---a~g~~i~~lD~D~~~~~~~l~~~~~~~--~~~~~v~g~~~ 115 (182)
T cd06420 76 AA---AKGDYLIFIDGDCIPHPDFIADHIELA--EPGVFLSGSRV 115 (182)
T ss_pred HH---hcCCEEEEEcCCcccCHHHHHHHHHHh--CCCcEEeccee
Confidence 95 899999999999999999999999988 46766655543
No 42
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.64 E-value=1.3e-15 Score=137.61 Aligned_cols=115 Identities=18% Similarity=0.155 Sum_probs=93.1
Q ss_pred EEEeccCCchhHHHHHHHHHcCCC--CCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDW--PKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKS 302 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdy--P~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~ 302 (352)
|+||+|||++.+.++|+++.+|.+ +...+||+|+||+|+|.+.++++++.++++. .+.++....+.| +++++|.
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~---~i~~i~~~~n~G-~~~a~~~ 76 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPA---LIRVLTLPKNRG-KGGAVRA 76 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCC---cEEEEEcccCCC-cHHHHHH
Confidence 689999999999999999998865 2224899999999999999888877654432 234556667777 9999999
Q ss_pred HHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 018646 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 303 al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
|++. +++|+|+++|+|..++|+++.+++..+.+++...+++
T Consensus 77 g~~~---a~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g 117 (211)
T cd04188 77 GMLA---ARGDYILFADADLATPFEELEKLEEALKTSGYDIAIG 117 (211)
T ss_pred HHHH---hcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEE
Confidence 9995 7899999999999999999999999976544433333
No 43
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.64 E-value=3.6e-15 Score=140.02 Aligned_cols=115 Identities=8% Similarity=-0.058 Sum_probs=87.8
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHc---CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchH
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCN---LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~---qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka 297 (352)
|.||||||+||+++.++++|+|+.+ |.+++ +||+|+||+|+|.|.++++++..+ .++.++.. ++.| ++
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~--~EiIVvDdgStD~t~~i~~~~~~~-----~~i~~i~~-~~~G-~~ 71 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGIS--FEWIVVDGGSNDGTREFLENLNGI-----FNLRFVSE-PDNG-IY 71 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCC--EEEEEEECcCcccHHHHHHHhccc-----CCEEEEEC-CCCC-HH
Confidence 6899999999999999999999975 34554 999999999999999888754311 13444443 4556 99
Q ss_pred HHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEe
Q 018646 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 298 ~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
+++|.|++. ++||||+++|+|+...|+.++.+......+++..++++
T Consensus 72 ~A~N~Gi~~---a~g~~v~~ld~DD~~~~~~~~~~~~~~~~~~~~~v~g~ 118 (248)
T PRK10063 72 DAMNKGIAM---AQGRFALFLNSGDIFHQDAANFVRQLKMQKDNAMIIGD 118 (248)
T ss_pred HHHHHHHHH---cCCCEEEEEeCCcccCcCHHHHHHHHHhCCCCeEEEee
Confidence 999999995 89999999999999999886654443344455555544
No 44
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.63 E-value=3.4e-15 Score=127.62 Aligned_cols=110 Identities=13% Similarity=0.138 Sum_probs=94.6
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
|+||+||+.+.+++++.|+.+|+++. .+|+|+||++++.+.+.+++. ..++.++....+.| ++.++|.|+
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~-------~~~~~~~~~~~~~g-~~~a~n~~~ 70 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLREL-------FPEVRLIRNGENLG-FGAGNNQGI 70 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHh-------CCCeEEEecCCCcC-hHHHhhHHH
Confidence 68999999999999999999999865 889999999999887776532 11344555666667 999999999
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEe
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
++ +++|+++++|+|+.++|+++.+++..+.++++++++++
T Consensus 71 ~~---~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~ 110 (166)
T cd04186 71 RE---AKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGP 110 (166)
T ss_pred hh---CCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEc
Confidence 96 69999999999999999999999999988899998875
No 45
>PLN02893 Cellulose synthase-like protein
Probab=99.63 E-value=1.2e-14 Score=152.50 Aligned_cols=134 Identities=20% Similarity=0.295 Sum_probs=102.6
Q ss_pred CCCCeEEEEEec---cCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH---------------------
Q 018646 218 GFFPMVLVQIPM---CNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE--------------------- 272 (352)
Q Consensus 218 ~~~P~VsViIPa---yNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~--------------------- 272 (352)
+++|.|+|.|+| ++|+ -....|+-|+++.|||.+++.++|.|||...-|-+...+
T Consensus 98 ~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk~~ie~R~ 177 (734)
T PLN02893 98 SDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERC 177 (734)
T ss_pred ccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 379999999999 6776 678899999999999999999999999876644110000
Q ss_pred --------------------------------HH------HHh-------------hh----------------------
Q 018646 273 --------------------------------EV------LKW-------------QE---------------------- 279 (352)
Q Consensus 273 --------------------------------~~------~~~-------------~~---------------------- 279 (352)
.. +++ ..
T Consensus 178 P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~d 257 (734)
T PLN02893 178 PEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDKD 257 (734)
T ss_pred HHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCccc
Confidence 00 000 00
Q ss_pred ----cCCeEEEeeccCCC----CchHHHHHHHHhcc-CCCCccEEEEEcCCCCC-ChHHHHHHHHHHhc---CCcEEEEE
Q 018646 280 ----AGANIVYRHRILRD----GYKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKV---TKLIGFFL 346 (352)
Q Consensus 280 ----~~v~ii~~~r~~~~----G~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~-~pd~L~~lv~~f~~---dp~vg~Vq 346 (352)
.-.+++|+.|++++ ++||||||.+++.+ ..+++++|+++|+|+.+ +|+++++++++|.+ ++++|+||
T Consensus 258 ~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQ 337 (734)
T PLN02893 258 ITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQ 337 (734)
T ss_pred hhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEe
Confidence 00235688888874 67999999999854 23789999999999996 79999999999974 23799999
Q ss_pred ecccc
Q 018646 347 FESLM 351 (352)
Q Consensus 347 tr~~~ 351 (352)
+||.+
T Consensus 338 fPQ~F 342 (734)
T PLN02893 338 FPQIF 342 (734)
T ss_pred Ccccc
Confidence 99975
No 46
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.62 E-value=6.6e-15 Score=143.57 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=91.6
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHc---CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCch
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCN---LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~---qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~K 296 (352)
.+.+||+||+|||++.+.++++++.+ |..+ .+||+|+||+|+|.|.+++++..++ .+.+++.+....|.| |
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~--~~EIIvVDDgS~D~T~~il~~~~~~---~~~~v~~i~~~~n~G-~ 78 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGK--EYEILLIDDGSSDNSAEMLVEAAQA---PDSHIVAILLNRNYG-Q 78 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCC--CEEEEEEeCCCCCcHHHHHHHHHhh---cCCcEEEEEeCCCCC-H
Confidence 46799999999999999998887643 4333 4899999999999999888765432 234555544556667 9
Q ss_pred HHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCc
Q 018646 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 297 a~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~ 341 (352)
+.|++.|+++ +++|+++++|+|.+.+|+.+.+++..++++.+
T Consensus 79 ~~A~~~G~~~---A~gd~vv~~DaD~q~~p~~i~~l~~~~~~~~D 120 (325)
T PRK10714 79 HSAIMAGFSH---VTGDLIITLDADLQNPPEEIPRLVAKADEGYD 120 (325)
T ss_pred HHHHHHHHHh---CCCCEEEEECCCCCCCHHHHHHHHHHHHhhCC
Confidence 9999999995 79999999999999999999999999975444
No 47
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.62 E-value=3.9e-15 Score=130.53 Aligned_cols=116 Identities=16% Similarity=0.166 Sum_probs=95.8
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
|+||+||+++.+.++|.++.+|.|+...+||+|+||+++|.+.+.++.+..+.+ .+.++..+.+.| +++++|.|+
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~----~~~~~~~~~n~G-~~~a~n~g~ 75 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVP----RVRVIRLSRNFG-KGAAVRAGF 75 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCC----CeEEEEccCCCC-ccHHHHHHH
Confidence 689999999999999999999988434589999999999999888877655443 334556777777 999999999
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
++ +++|+++++|+|..+.|++|++++..+.. ++.++|.++.
T Consensus 76 ~~---a~gd~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~g~~ 116 (185)
T cd04179 76 KA---ARGDIVVTMDADLQHPPEDIPKLLEKLLE-GGADVVIGSR 116 (185)
T ss_pred HH---hcCCEEEEEeCCCCCCHHHHHHHHHHHhc-cCCcEEEEEe
Confidence 95 78899999999999999999999999664 4455555543
No 48
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.57 E-value=3.1e-14 Score=125.31 Aligned_cols=108 Identities=15% Similarity=0.184 Sum_probs=87.8
Q ss_pred EEEeccCCchhHHHHHHHHHcC---CCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNL---DWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~q---dyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn 301 (352)
|+||+|||++.+.+++.++.++ +++. +||+|+||+|+|.+.++++.+.++.+ ++.++....+.| ++.++|
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~--~eiivvdd~s~d~t~~~~~~~~~~~~----~i~~i~~~~n~G-~~~a~n 73 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYD--YEIIFVDDGSTDRTLEILRELAARDP----RVKVIRLSRNFG-QQAALL 73 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCC--eEEEEEeCCCCccHHHHHHHHHhhCC----CEEEEEecCCCC-cHHHHH
Confidence 6899999999999988887654 3454 89999999999998888876654332 445555666777 999999
Q ss_pred HHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcE
Q 018646 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLI 342 (352)
Q Consensus 302 ~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~v 342 (352)
.|+++ +++|+|+++|+|..++|++|++++..+..+.++
T Consensus 74 ~g~~~---a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~ 111 (181)
T cd04187 74 AGLDH---ARGDAVITMDADLQDPPELIPEMLAKWEEGYDV 111 (181)
T ss_pred HHHHh---cCCCEEEEEeCCCCCCHHHHHHHHHHHhCCCcE
Confidence 99995 789999999999999999999999997644443
No 49
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.56 E-value=1.5e-13 Score=145.20 Aligned_cols=122 Identities=16% Similarity=0.082 Sum_probs=85.9
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHH-cCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVC-NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~-~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka 297 (352)
+.|+++|+||+|||++++.+++++++ +++||+ ++|+|+.+.+|.+|.+.+++....++ .++++...+...+| |+
T Consensus 69 ~~~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~~~~~~~~~~~p--~~~~v~~~~~gp~g-Ka 143 (703)
T PRK15489 69 DEQPLAIMVPAWKEYDVIAKMIENMLATLDYRR--YVIFVGTYPNDAETITEVERMRRRYK--RLVRVEVPHDGPTC-KA 143 (703)
T ss_pred CCCceEEEEeCCCcHHHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHHHHHHHHhccCC--cEEEEEcCCCCCCC-HH
Confidence 57899999999999999999999975 789997 78888543333355555555544433 24444333333345 99
Q ss_pred HHHHHHHhcc---C-CCC--ccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 298 GNLKSAMNCS---Y-VKD--YEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 298 ~aLn~al~~~---~-~a~--gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
.++|+++... . ... .+.|++.|||++++|+.|+.+ .++..++ .++|.|
T Consensus 144 ~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~~~--~~iQ~p 197 (703)
T PRK15489 144 DCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYF-NYLLPRK--DLVQLP 197 (703)
T ss_pred HHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHH-HhhcCCc--ceeeee
Confidence 9999998752 0 112 344999999999999999877 5665445 467765
No 50
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.56 E-value=4.7e-14 Score=127.34 Aligned_cols=100 Identities=18% Similarity=0.280 Sum_probs=84.6
Q ss_pred EEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHH
Q 018646 223 VLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKS 302 (352)
Q Consensus 223 VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~ 302 (352)
|+|+||+||+++.+.++|.|+.+|+|+. +||+|+||+++|.+.+++++ .++.+.. .+.| ++.++|.
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~---------~~~~~~~--~~~g-~~~a~n~ 66 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS---------AGVVVIS--SPKG-RARQMNA 66 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc---------CCeEEEe--CCcC-HHHHHHH
Confidence 6899999999999999999999999965 89999999999988877652 2333332 3345 8999999
Q ss_pred HHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC
Q 018646 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 303 al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d 339 (352)
|++. +++|+|+++|+|+.++|+++++++..+.++
T Consensus 67 g~~~---a~~~~i~~~D~D~~~~~~~l~~l~~~~~~~ 100 (221)
T cd02522 67 GAAA---ARGDWLLFLHADTRLPPDWDAAIIETLRAD 100 (221)
T ss_pred HHHh---ccCCEEEEEcCCCCCChhHHHHHHHHhhcC
Confidence 9995 789999999999999999999998887753
No 51
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.56 E-value=4.1e-14 Score=119.92 Aligned_cols=106 Identities=22% Similarity=0.253 Sum_probs=88.6
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHH
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~a 299 (352)
.|.+||+||+||+++.+.++|.|+++|+|+. .||+|+||+|+|.+.++++++..+. ..+.......+.| +..+
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~~~~~~~~----~~~~~~~~~~~~g-~~~~ 74 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIAIEYGAKD----VRVIRLINERNGG-LGAA 74 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHHHHHhhhc----ceEEEeecccCCC-hHHH
Confidence 4789999999999999999999999999997 8899999999999998888765432 2344444556666 9999
Q ss_pred HHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 018646 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (352)
Q Consensus 300 Ln~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f 336 (352)
+|.++.. +.+|++.++|+|.+ +++.+..+....
T Consensus 75 ~~~~~~~---~~~~~~~~~d~d~~-~~~~~~~~~~~~ 107 (291)
T COG0463 75 RNAGLEY---ARGDYIVFLDADDQ-HPPELIPLVAAG 107 (291)
T ss_pred HHhhHHh---ccCCEEEEEccCCC-CCHHHHHHHHHh
Confidence 9999995 77899999999999 888887744433
No 52
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.55 E-value=6.9e-14 Score=128.93 Aligned_cols=105 Identities=21% Similarity=0.264 Sum_probs=88.8
Q ss_pred eEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHH
Q 018646 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (352)
Q Consensus 222 ~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn 301 (352)
++||+||+|||++.++++|+|+..|. -||+|+||+|+|.|.++++ ..+++++ +. .+.| .+.+.|
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~-----~eiivvD~gStD~t~~i~~-------~~~~~v~--~~-~~~g-~~~~~n 64 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV-----DEIIVVDSGSTDRTVEIAK-------EYGAKVY--QR-WWDG-FGAQRN 64 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc-----CEEEEEeCCCCccHHHHHH-------HcCCEEE--EC-CCCC-hHHHHH
Confidence 48999999999999999999998873 2799999999999988886 3456655 33 5556 899999
Q ss_pred HHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEE
Q 018646 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 302 ~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
.|++. +++|||+++|+|..++|++++++...+.++|..+..
T Consensus 65 ~~~~~---a~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~~~~~ 105 (229)
T cd02511 65 FALEL---ATNDWVLSLDADERLTPELADEILALLATDDYDGYY 105 (229)
T ss_pred HHHHh---CCCCEEEEEeCCcCcCHHHHHHHHHHHhCCCCcEEE
Confidence 99995 789999999999999999999999999987764433
No 53
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.54 E-value=5.5e-14 Score=128.39 Aligned_cols=111 Identities=18% Similarity=0.194 Sum_probs=88.3
Q ss_pred EEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHH
Q 018646 225 VQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 225 ViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
++||+||++ +.+.+||+|+.+| . .+|+|+||++++++....+. ...++.++..+.|.| +++++|.|
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q---~--~~iivvDn~s~~~~~~~~~~-------~~~~i~~i~~~~n~G-~~~a~N~g 67 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ---V--DKVVVVDNSSGNDIELRLRL-------NSEKIELIHLGENLG-IAKALNIG 67 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc---C--CEEEEEeCCCCccHHHHhhc-------cCCcEEEEECCCcee-hHHhhhHH
Confidence 589999999 9999999999998 2 57899999999887654431 123455666777777 99999999
Q ss_pred HhccCCCCccEEEEEcCCCCCChHHHHHHH---HHHhcCCcEEEEEec
Q 018646 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTV---PHFKVTKLIGFFLFE 348 (352)
Q Consensus 304 l~~~~~a~gd~V~~lDAD~~~~pd~L~~lv---~~f~~dp~vg~Vqtr 348 (352)
++.....++|||+++|+|+.++|++|++++ ..+.++++++++++.
T Consensus 68 ~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 115 (237)
T cd02526 68 IKAALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPR 115 (237)
T ss_pred HHHHHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeee
Confidence 996211245999999999999999999995 566667888887764
No 54
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.50 E-value=8.8e-13 Score=132.20 Aligned_cols=166 Identities=23% Similarity=0.252 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccCCCCCCCeEEEEEeccCCc-----hhHHHHHHHHHcCC
Q 018646 173 ACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEK-----EVYQQSIAAVCNLD 247 (352)
Q Consensus 173 ~~i~l~l~~~~~~l~l~l~~f~i~~~r~rp~~~~~~~~~~~~~~~~~~P~VsViIPayNE~-----~vl~~tL~sl~~qd 247 (352)
++..+|...+........|++...+.+.|+.....+ .+.+ +..+..|++|+|||+ .-++.+.+|+.+-.
T Consensus 102 Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~----~p~p--~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg 175 (736)
T COG2943 102 LFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPN----EPLP--DLHRTAILMPIYNEDVNRVFAGLRATYESLAATG 175 (736)
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCC----CCCC--cccceeEEeeccccCHHHHHHHHHHHHHHHHhhC
Confidence 345555556555555555666555555444221111 1111 345689999999998 46777788887754
Q ss_pred CCCCeeEEEEEeCCCChhHHHHHH--HHHHHhhhcC--CeEEEeeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCC
Q 018646 248 WPKSKILIQVLDDSDDPTAQTLIK--EEVLKWQEAG--ANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQ 323 (352)
Q Consensus 248 yP~~~leIiVvDDssdd~t~~li~--~~~~~~~~~~--v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~ 323 (352)
.- +.++++|+.|+.|+++. +++ ++..-+.+.+ .++.|+.|.+|.+-|+||+.--.++ +...|++.+++|||.+
T Consensus 176 ~~-~~FD~FVLSDs~dpdia-lAEq~a~~~l~~e~~g~~~ifYRrRr~n~~RKaGNIaDfcrR-wG~~Y~~MlVLDADSv 252 (736)
T COG2943 176 HA-EHFDFFVLSDSRDPDIA-LAEQKAWAELCRELGGEGNIFYRRRRRNVKRKAGNIADFCRR-WGSAYSYMLVLDADSV 252 (736)
T ss_pred Cc-ccceEEEEcCCCCchhh-hhHHHHHHHHHHHhCCCCceeeehHhhhhcccccCHHHHHHH-hCcccceEEEeecccc
Confidence 33 47999999999888764 222 2223333333 6889999999999999999988776 3678999999999999
Q ss_pred CChHHHHHHHHHHhcCCcEEEEEe
Q 018646 324 PNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 324 ~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
+.+|++.+++..|+.||+.|++||
T Consensus 253 Mtgd~lvrLv~~ME~~P~aGlIQt 276 (736)
T COG2943 253 MTGDCLVRLVRLMEANPDAGLIQT 276 (736)
T ss_pred cCchHHHHHHHHHhhCCCCceeec
Confidence 999999999999999999999997
No 55
>PLN02190 cellulose synthase-like protein
Probab=99.50 E-value=6e-13 Score=139.57 Aligned_cols=133 Identities=23% Similarity=0.367 Sum_probs=102.3
Q ss_pred CCCeEEEEEeccC---Cc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH----------------------
Q 018646 219 FFPMVLVQIPMCN---EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE---------------------- 272 (352)
Q Consensus 219 ~~P~VsViIPayN---E~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~---------------------- 272 (352)
++|.|+|.|+|+| |+ ..+..|+.|+++.|||.+++.++|.|||...-|-+...+
T Consensus 91 ~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~IepRaP 170 (756)
T PLN02190 91 DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAP 170 (756)
T ss_pred cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCCCcCCH
Confidence 5899999999999 77 788999999999999999999999999877655111110
Q ss_pred --------------------------H------HHH------hhh----------------------------------c
Q 018646 273 --------------------------E------VLK------WQE----------------------------------A 280 (352)
Q Consensus 273 --------------------------~------~~~------~~~----------------------------------~ 280 (352)
+ +++ ++. .
T Consensus 171 e~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~~~~~~~ 250 (756)
T PLN02190 171 FRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEKE 250 (756)
T ss_pred HHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEecCCCCcccccc
Confidence 0 000 000 0
Q ss_pred CCeEEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCCCC-ChHHHHHHHHHHhcCC----cEEEEEeccc
Q 018646 281 GANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKVTK----LIGFFLFESL 350 (352)
Q Consensus 281 ~v~ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~-~pd~L~~lv~~f~~dp----~vg~Vqtr~~ 350 (352)
=.+++|+.|++++| .|+||+|..++-+ ..+++++|+.+|+|+.. +|+.+++.+.+|.+++ ++++||.||.
T Consensus 251 lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~ 330 (756)
T PLN02190 251 VPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQE 330 (756)
T ss_pred CceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchh
Confidence 12356777777775 5999999987654 34789999999999976 8999999999998542 6999999996
Q ss_pred c
Q 018646 351 M 351 (352)
Q Consensus 351 ~ 351 (352)
+
T Consensus 331 F 331 (756)
T PLN02190 331 F 331 (756)
T ss_pred h
Confidence 5
No 56
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.45 E-value=1.6e-12 Score=107.50 Aligned_cols=114 Identities=19% Similarity=0.256 Sum_probs=93.7
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
|+||++|+.+.+.+++.++.+++++. .+++|+||++++++.+.+++.... ...........+.| +++++|.++
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g-~~~~~~~~~ 73 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAKK----DPRVIRVINEENQG-LAAARNAGL 73 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHhc----CCCeEEEEecCCCC-hHHHHHHHH
Confidence 68999999999999999999999865 789999999988888777654322 12334444555555 999999999
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
++ .++|+++++|+|..+.|+++..++..+..+++.++++++
T Consensus 74 ~~---~~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (156)
T cd00761 74 KA---ARGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP 114 (156)
T ss_pred HH---hcCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc
Confidence 96 589999999999999999999997777778888888764
No 57
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=99.44 E-value=1.1e-12 Score=116.50 Aligned_cols=120 Identities=20% Similarity=0.200 Sum_probs=93.4
Q ss_pred CeEEEEEeccCCchhHHHHHH---HHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchH
Q 018646 221 PMVLVQIPMCNEKEVYQQSIA---AVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~---sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka 297 (352)
++.||++|+|||.+++.-++. ....+. ..+.||+++||+|.|.|++.+++..+.+...++.+ ..|.+..| -+
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~~~~e~--~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l--~pR~~klG-Lg 77 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAKYMSEE--GKKYEIIIVDDASPDGTQEVAKALQKIYGEDNILL--KPRTKKLG-LG 77 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHhhhhhh--cCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEE--EeccCccc-ch
Confidence 578999999999976663333 333222 33589999999999999999998877777665544 45666566 77
Q ss_pred HHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 298 ~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
.|..+|+.+ ++|+|++++|||...+|.++.++.+..++ -+.++|.+-+
T Consensus 78 tAy~hgl~~---a~g~fiviMDaDlsHhPk~ipe~i~lq~~-~~~div~GTR 125 (238)
T KOG2978|consen 78 TAYIHGLKH---ATGDFIVIMDADLSHHPKFIPEFIRLQKE-GNYDIVLGTR 125 (238)
T ss_pred HHHHhhhhh---ccCCeEEEEeCccCCCchhHHHHHHHhhc-cCcceeeeee
Confidence 788899996 89999999999999999999999998885 5666666543
No 58
>PLN02189 cellulose synthase
Probab=99.43 E-value=2.3e-12 Score=138.62 Aligned_cols=132 Identities=22% Similarity=0.310 Sum_probs=101.5
Q ss_pred CCCeEEEEEeccC---Cc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH----------------------
Q 018646 219 FFPMVLVQIPMCN---EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE---------------------- 272 (352)
Q Consensus 219 ~~P~VsViIPayN---E~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~---------------------- 272 (352)
++|.|+|.|+|-+ |+ -+...|+-|+++.|||.+++.++|.|||...-|-+.+.+
T Consensus 329 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaP 408 (1040)
T PLN02189 329 MLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAP 408 (1040)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCH
Confidence 5999999999965 44 577899999999999999999999999876644111000
Q ss_pred -----------------------------H----------HHH---hhh-------------------------------
Q 018646 273 -----------------------------E----------VLK---WQE------------------------------- 279 (352)
Q Consensus 273 -----------------------------~----------~~~---~~~------------------------------- 279 (352)
+ .++ .+.
T Consensus 409 e~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~ 488 (1040)
T PLN02189 409 EFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSG 488 (1040)
T ss_pred HHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCCC
Confidence 0 000 000
Q ss_pred ----cC---CeEEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCCCC-ChHHHHHHHHHHhcCC----cE
Q 018646 280 ----AG---ANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKVTK----LI 342 (352)
Q Consensus 280 ----~~---v~ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~-~pd~L~~lv~~f~~dp----~v 342 (352)
.+ .+++|+.|++++| +||||||..++-+ ..++++||+.+|+|+.+ +|+.+++.+.+|. || ++
T Consensus 489 ~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCffl-Dp~~g~~v 567 (1040)
T PLN02189 489 GHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLM-DPQIGRKV 567 (1040)
T ss_pred CccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhc-CCccCcee
Confidence 00 1277888888776 4999999999654 34789999999999998 5699999999998 47 89
Q ss_pred EEEEecccc
Q 018646 343 GFFLFESLM 351 (352)
Q Consensus 343 g~Vqtr~~~ 351 (352)
++||+||.+
T Consensus 568 AfVQFPQrF 576 (1040)
T PLN02189 568 CYVQFPQRF 576 (1040)
T ss_pred EEEeCcccc
Confidence 999999965
No 59
>PLN02195 cellulose synthase A
Probab=99.42 E-value=4.5e-12 Score=135.79 Aligned_cols=133 Identities=20% Similarity=0.239 Sum_probs=100.0
Q ss_pred CCCCeEEEEEeccC---Cc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH---------------------
Q 018646 218 GFFPMVLVQIPMCN---EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE--------------------- 272 (352)
Q Consensus 218 ~~~P~VsViIPayN---E~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~--------------------- 272 (352)
.++|.|+|.|+|-+ |+ -+...|+-|+++.|||.+++.++|.|||...-|-+.+.+
T Consensus 249 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 328 (977)
T PLN02195 249 SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRA 328 (977)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 36999999999965 44 577899999999999999999999999876644111000
Q ss_pred ----------------------------------------HHHH---hhh------------------------------
Q 018646 273 ----------------------------------------EVLK---WQE------------------------------ 279 (352)
Q Consensus 273 ----------------------------------------~~~~---~~~------------------------------ 279 (352)
..++ .+.
T Consensus 329 Pe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~ 408 (977)
T PLN02195 329 PEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGET 408 (977)
T ss_pred HHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCC
Confidence 0000 000
Q ss_pred --------cCCeEEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCCCCCh-HHHHHHHHHHhcCC----c
Q 018646 280 --------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQPNP-DFLRRTVPHFKVTK----L 341 (352)
Q Consensus 280 --------~~v~ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~~p-d~L~~lv~~f~~dp----~ 341 (352)
.=.+++|+.|++++| +|+||+|..++.+ ..+++++|+.+|+|+.+.+ +++++++.+|. || +
T Consensus 409 ~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~-D~~~g~~ 487 (977)
T PLN02195 409 GARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLM-DPVVGRD 487 (977)
T ss_pred CCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhcc-CcccCCe
Confidence 002356777877775 4999999999754 2478999999999997755 79999999998 46 7
Q ss_pred EEEEEecccc
Q 018646 342 IGFFLFESLM 351 (352)
Q Consensus 342 vg~Vqtr~~~ 351 (352)
+++||+||.+
T Consensus 488 va~VQ~PQ~F 497 (977)
T PLN02195 488 VCYVQFPQRF 497 (977)
T ss_pred eEEEcCCccc
Confidence 8999999965
No 60
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=99.40 E-value=7.8e-12 Score=135.00 Aligned_cols=133 Identities=23% Similarity=0.303 Sum_probs=101.2
Q ss_pred CCCCeEEEEEeccC---Cc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH---------------------
Q 018646 218 GFFPMVLVQIPMCN---EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE--------------------- 272 (352)
Q Consensus 218 ~~~P~VsViIPayN---E~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~--------------------- 272 (352)
.++|.|+|.|+|-+ |+ -+...|+-|+++.|||.+++.++|.|||...-|-+.+.+
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 425 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 425 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 36999999999965 44 577899999999999999999999999876644111100
Q ss_pred ------------------------------H----------HHH---hhh------------------------------
Q 018646 273 ------------------------------E----------VLK---WQE------------------------------ 279 (352)
Q Consensus 273 ------------------------------~----------~~~---~~~------------------------------ 279 (352)
+ .++ .+.
T Consensus 426 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~ 505 (1079)
T PLN02638 426 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHS 505 (1079)
T ss_pred HHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCC
Confidence 0 000 000
Q ss_pred -----cC---CeEEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCCCCC-hHHHHHHHHHHhcCCc----
Q 018646 280 -----AG---ANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQPN-PDFLRRTVPHFKVTKL---- 341 (352)
Q Consensus 280 -----~~---v~ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~~-pd~L~~lv~~f~~dp~---- 341 (352)
.+ .+++|+.|++++| +||||||..++-+ ..++++||+.+|+|+.+. |+.+++.+.+|. ||+
T Consensus 506 ~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~l-Dp~~g~~ 584 (1079)
T PLN02638 506 GGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLM-DPNLGKS 584 (1079)
T ss_pred CccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhc-CcccCCe
Confidence 00 1347888888776 4999999999654 347899999999999875 999999999998 465
Q ss_pred EEEEEecccc
Q 018646 342 IGFFLFESLM 351 (352)
Q Consensus 342 vg~Vqtr~~~ 351 (352)
+++||+||.+
T Consensus 585 vafVQFPQrF 594 (1079)
T PLN02638 585 VCYVQFPQRF 594 (1079)
T ss_pred eEEecCCccc
Confidence 9999999965
No 61
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.30 E-value=2.2e-11 Score=117.36 Aligned_cols=121 Identities=17% Similarity=0.228 Sum_probs=100.7
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHH
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~a 299 (352)
.|.++++|++||..+.+.+|+.++.+|+|+. .+++++|++|.|.+.+.++... ..+++++....|.| -+++
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~~~~~~------~~~v~~i~~~~NlG-~agg 72 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEALKARF------FPNVRLIENGENLG-FAGG 72 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHHHHhhc------CCcEEEEEcCCCcc-chhh
Confidence 4789999999999999999999999999998 4455899998888887776311 35667778888888 8888
Q ss_pred HHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 300 Ln~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
.|.|++......++++++++.|+.++|++|++++..+..+|..++++...
T Consensus 73 ~n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i 122 (305)
T COG1216 73 FNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLI 122 (305)
T ss_pred hhHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeE
Confidence 89988864222233999999999999999999999999999999888754
No 62
>PLN02436 cellulose synthase A
Probab=99.27 E-value=1.2e-10 Score=125.80 Aligned_cols=133 Identities=22% Similarity=0.310 Sum_probs=100.4
Q ss_pred CCCCeEEEEEeccC---Cc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH---------------------
Q 018646 218 GFFPMVLVQIPMCN---EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE--------------------- 272 (352)
Q Consensus 218 ~~~P~VsViIPayN---E~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~--------------------- 272 (352)
.++|.|+|+|+|-+ |+ -+...|+-|+++.|||.+++.++|.|||...-|-+.+.+
T Consensus 362 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRa 441 (1094)
T PLN02436 362 SELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRA 441 (1094)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 36999999999965 44 578899999999999999999999999876544110000
Q ss_pred ----------------------------------------HHHH--------hh-h------------------------
Q 018646 273 ----------------------------------------EVLK--------WQ-E------------------------ 279 (352)
Q Consensus 273 ----------------------------------------~~~~--------~~-~------------------------ 279 (352)
..++ +. +
T Consensus 442 Pe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~ 521 (1094)
T PLN02436 442 PEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHS 521 (1094)
T ss_pred HHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCC
Confidence 0000 00 0
Q ss_pred --------cCCeEEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCC----c
Q 018646 280 --------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTK----L 341 (352)
Q Consensus 280 --------~~v~ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp----~ 341 (352)
.=.+++|+.|++++| +||||||..++-+ ..++++||+.+|+|+ +-+|+.+++.+.+|. || +
T Consensus 522 ~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfll-D~~~g~~ 600 (1094)
T PLN02436 522 GVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMM-DPQSGKK 600 (1094)
T ss_pred CCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhc-CCccCCe
Confidence 002356777777775 5999999988765 337899999999999 559999999999998 45 8
Q ss_pred EEEEEecccc
Q 018646 342 IGFFLFESLM 351 (352)
Q Consensus 342 vg~Vqtr~~~ 351 (352)
+++||.||-+
T Consensus 601 ~afVQFPQrF 610 (1094)
T PLN02436 601 ICYVQFPQRF 610 (1094)
T ss_pred eEEEcCCccc
Confidence 9999999954
No 63
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.27 E-value=4.1e-11 Score=113.46 Aligned_cols=106 Identities=18% Similarity=0.157 Sum_probs=83.5
Q ss_pred ccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCCh--hHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 229 MCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDP--TAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 229 ayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd--~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
|||++ +.++++|.|+.+|. .+|+||||+|++ ++.++.+ ...++.+++...|.| .++|+|.|++
T Consensus 2 tyn~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~~~~~~~~~--------~~~~i~~i~~~~N~G-~a~a~N~Gi~ 67 (281)
T TIGR01556 2 TFNPDLEHLGELITSLPKQV-----DRIIAVDNSPHSDQPLKNARL--------RGQKIALIHLGDNQG-IAGAQNQGLD 67 (281)
T ss_pred ccCccHHHHHHHHHHHHhcC-----CEEEEEECcCCCcHhHHHHhc--------cCCCeEEEECCCCcc-hHHHHHHHHH
Confidence 79975 89999999999984 469999998654 3333221 123556667777888 9999999998
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCC-cEEEEEec
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTK-LIGFFLFE 348 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp-~vg~Vqtr 348 (352)
.....++|||+++|+|+.++++++++++..+.+++ +++++++.
T Consensus 68 ~a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 111 (281)
T TIGR01556 68 ASFRRGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPR 111 (281)
T ss_pred HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCe
Confidence 74334789999999999999999999999998765 78887754
No 64
>PLN02400 cellulose synthase
Probab=99.22 E-value=3e-10 Score=122.98 Aligned_cols=134 Identities=22% Similarity=0.254 Sum_probs=101.3
Q ss_pred CCCCeEEEEEeccC---Cc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH---------------------
Q 018646 218 GFFPMVLVQIPMCN---EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE--------------------- 272 (352)
Q Consensus 218 ~~~P~VsViIPayN---E~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~--------------------- 272 (352)
.++|.|+|+|+|-+ |+ -+...|+-|+++.|||.+++.++|.|||...-|-+.+.+
T Consensus 353 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRa 432 (1085)
T PLN02400 353 SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRA 432 (1085)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCC
Confidence 36999999999965 44 577899999999999999999999999876644111000
Q ss_pred ----------------------------------------HHHH---hhh------------------------------
Q 018646 273 ----------------------------------------EVLK---WQE------------------------------ 279 (352)
Q Consensus 273 ----------------------------------------~~~~---~~~------------------------------ 279 (352)
..++ .+.
T Consensus 433 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~ 512 (1085)
T PLN02400 433 PEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHS 512 (1085)
T ss_pred HHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCC
Confidence 0000 000
Q ss_pred --------cCCeEEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCCCC-ChHHHHHHHHHHhcC---CcE
Q 018646 280 --------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKVT---KLI 342 (352)
Q Consensus 280 --------~~v~ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~-~pd~L~~lv~~f~~d---p~v 342 (352)
.=.+++|+.|++++| .||||||..++-+ ..++++||+.+|+|+.. +|+.+++.+.+|.+. +++
T Consensus 513 ~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~ 592 (1085)
T PLN02400 513 GGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKT 592 (1085)
T ss_pred CCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCcee
Confidence 002366888888876 5999999988754 34789999999999988 999999999999741 379
Q ss_pred EEEEecccc
Q 018646 343 GFFLFESLM 351 (352)
Q Consensus 343 g~Vqtr~~~ 351 (352)
++||.||-+
T Consensus 593 afVQFPQrF 601 (1085)
T PLN02400 593 CYVQFPQRF 601 (1085)
T ss_pred EEEeCCccc
Confidence 999999954
No 65
>PLN02248 cellulose synthase-like protein
Probab=99.19 E-value=3.9e-10 Score=122.14 Aligned_cols=68 Identities=24% Similarity=0.304 Sum_probs=54.8
Q ss_pred EEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCCCC-ChHHHHHHHHHHhc--CCcEEEEEecccc
Q 018646 284 IVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKV--TKLIGFFLFESLM 351 (352)
Q Consensus 284 ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~-~pd~L~~lv~~f~~--dp~vg~Vqtr~~~ 351 (352)
++|+.|++++| +||||||..++-+ ..++++||+.+|+|+.+ ++..+++.+.+|.+ .+++++||+||.+
T Consensus 587 LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~g~~vAfVQFPQrF 662 (1135)
T PLN02248 587 LVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICYVQFPQRF 662 (1135)
T ss_pred eEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCCCCceEEEcCCccc
Confidence 45666666664 4999998877543 34789999999999987 66699999999984 3799999999965
No 66
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.18 E-value=4.2e-10 Score=107.39 Aligned_cols=109 Identities=17% Similarity=0.267 Sum_probs=79.9
Q ss_pred EEEEeccCCc------hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCC---C
Q 018646 224 LVQIPMCNEK------EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD---G 294 (352)
Q Consensus 224 sViIPayNE~------~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~---G 294 (352)
|||||++|+. +.+..++.++.++.-+ ..+||||+||++++...+.+++..+ ..+.. .++...... |
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~-~~~eiIvvd~~s~~~~~~~l~~~~~---~~~~~-~~i~~~~~~~~f~ 75 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSD-PDFEIIVVDDGSSDEFDEELKKLCE---KNGFI-RYIRHEDNGEPFS 75 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCchhHHHHHHHHHh---ccCce-EEEEcCCCCCCcC
Confidence 6999999998 3455567777774333 3599999999998887555554443 22222 233333222 5
Q ss_pred chHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHH---HHhcCCc
Q 018646 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVP---HFKVTKL 341 (352)
Q Consensus 295 ~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~---~f~~dp~ 341 (352)
++.++|.|+++ +++|+|+|+|+|++++|+++++++. .+..+++
T Consensus 76 -~a~arN~g~~~---A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~ 121 (281)
T PF10111_consen 76 -RAKARNIGAKY---ARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPN 121 (281)
T ss_pred -HHHHHHHHHHH---cCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCC
Confidence 99999999995 8999999999999999999999999 5665553
No 67
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=99.15 E-value=4.2e-10 Score=121.49 Aligned_cols=133 Identities=22% Similarity=0.264 Sum_probs=99.8
Q ss_pred CCCeEEEEEeccC---Cc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH----------------------
Q 018646 219 FFPMVLVQIPMCN---EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE---------------------- 272 (352)
Q Consensus 219 ~~P~VsViIPayN---E~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~---------------------- 272 (352)
++|.|+|.|+|-+ |+ -+...|+-|+++.|||.+++.++|.|||...-|-+.+.+
T Consensus 285 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaP 364 (1044)
T PLN02915 285 RLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAP 364 (1044)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCH
Confidence 5999999999965 44 578899999999999999999999999876644111000
Q ss_pred ---------------------------------------HHHH---hhh-------------------------------
Q 018646 273 ---------------------------------------EVLK---WQE------------------------------- 279 (352)
Q Consensus 273 ---------------------------------------~~~~---~~~------------------------------- 279 (352)
..++ .+.
T Consensus 365 e~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~ 444 (1044)
T PLN02915 365 EFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEG 444 (1044)
T ss_pred HHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecCCC
Confidence 0000 000
Q ss_pred -------cCCeEEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCCCC-ChHHHHHHHHHHhc---CCcEE
Q 018646 280 -------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKV---TKLIG 343 (352)
Q Consensus 280 -------~~v~ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~-~pd~L~~lv~~f~~---dp~vg 343 (352)
.=.+++|+.|++++| .||||||.-++-+ ..++++||+.+|+|+.. +|..+++.+.+|.+ .++++
T Consensus 445 ~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~a 524 (1044)
T PLN02915 445 ALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLC 524 (1044)
T ss_pred CcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeE
Confidence 002356777887775 5999999988754 34689999999999976 89999999999974 23799
Q ss_pred EEEecccc
Q 018646 344 FFLFESLM 351 (352)
Q Consensus 344 ~Vqtr~~~ 351 (352)
+||.||-+
T Consensus 525 fVQFPQrF 532 (1044)
T PLN02915 525 YVQFPQRF 532 (1044)
T ss_pred EEeCCccc
Confidence 99999954
No 68
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.15 E-value=4.1e-10 Score=109.23 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=111.0
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
.+|.|||+.|..+-++.+...+++....+||. +|+..|-+++||...++++...++||..+.++.+-....+...|..
T Consensus 83 ~LPgVSiikPl~G~d~nl~~Nlesffts~Y~~--~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~vg~npKIn 160 (431)
T KOG2547|consen 83 KLPGVSIIKPLKGVDPNLYHNLESFFTSQYHK--YELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKVGLNPKIN 160 (431)
T ss_pred CCCCceEEeecccCCchhHHhHHHHHhhccCc--eEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEcccccccChhhh
Confidence 68999999999999999999999999999996 8888777777777778999999999988777776555555567888
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
|+--|.+ .+++|+|++.|+|..+.||.+..|+..+..+++.|+|+.-.+
T Consensus 161 N~mpgy~---~a~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py 209 (431)
T KOG2547|consen 161 NMMPGYR---AAKYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPY 209 (431)
T ss_pred ccCHHHH---HhcCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCce
Confidence 8888988 589999999999999999999999999998889999976443
No 69
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=99.08 E-value=3.6e-09 Score=99.68 Aligned_cols=109 Identities=16% Similarity=0.163 Sum_probs=84.9
Q ss_pred eEEEEEeccCCch----hHHHHHHHHHcCCC---CCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCC
Q 018646 222 MVLVQIPMCNEKE----VYQQSIAAVCNLDW---PKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (352)
Q Consensus 222 ~VsViIPayNE~~----vl~~tL~sl~~qdy---P~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G 294 (352)
-.+||||+|||+. .+.+++..+.. .| |.-++||+||||+|.|+|.+++-.+..++....++ ++.-..|.|
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~-ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~ir--V~~l~~nrg 144 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEK-RYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIR--VIKLKKNRG 144 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHH-HhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEE--EeehhccCC
Confidence 6899999999985 44555555543 33 33579999999999999999988777666555444 456677888
Q ss_pred chHHHHHHHHhccCCCCccEEEEEcCCC---CCChHHHHHHHHHHh
Q 018646 295 YKAGNLKSAMNCSYVKDYEFVAIFDADF---QPNPDFLRRTVPHFK 337 (352)
Q Consensus 295 ~Ka~aLn~al~~~~~a~gd~V~~lDAD~---~~~pd~L~~lv~~f~ 337 (352)
|+++...|+.+ +.|+++++.|||- ..+-+.|++.+....
T Consensus 145 -KGgAvR~g~l~---~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 145 -KGGAVRKGMLS---SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred -CCcceehhhHh---ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 99999999985 8999999999998 356678887777554
No 70
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=99.01 E-value=3.5e-09 Score=103.56 Aligned_cols=116 Identities=19% Similarity=0.239 Sum_probs=86.8
Q ss_pred EEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCC----C----
Q 018646 223 VLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD----G---- 294 (352)
Q Consensus 223 VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~----G---- 294 (352)
+.|+|.+||.++.++++|++|++|.+..+..+|+|.+||+++++.+.++.+. ..++ ++...... |
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~-----~~i~--~i~~~~~~~~~~~~~~~ 74 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFG-----DGVT--HIQHPPISIKNVNPPHK 74 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhc-----cccE--EEEcccccccccCcccc
Confidence 4689999999999999999999985333458899999999888777765431 1233 22221111 1
Q ss_pred ---c--hH----HHHHHHHhccCCCCccEEEEEcCCCCCChH---HHHHHHHHHhcCCcEEEEEec
Q 018646 295 ---Y--KA----GNLKSAMNCSYVKDYEFVAIFDADFQPNPD---FLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 295 ---~--Ka----~aLn~al~~~~~a~gd~V~~lDAD~~~~pd---~L~~lv~~f~~dp~vg~Vqtr 348 (352)
+ -+ .++|.++.. .+++.++++|.|..+.|| +++++++.+++||.+++|.+-
T Consensus 75 ~~~y~~ia~hyk~aln~vF~~---~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~ 137 (334)
T cd02514 75 FQGYYRIARHYKWALTQTFNL---FGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAW 137 (334)
T ss_pred cchhhHHHHHHHHHHHHHHHh---cCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEee
Confidence 0 02 267777773 579999999999999999 558888999999999999873
No 71
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.75 E-value=8.8e-08 Score=98.67 Aligned_cols=129 Identities=19% Similarity=0.273 Sum_probs=91.1
Q ss_pred CCCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCe-eEEEEEeC-----CCChhHHHHHHHHHHH---------------
Q 018646 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSK-ILIQVLDD-----SDDPTAQTLIKEEVLK--------------- 276 (352)
Q Consensus 219 ~~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~-leIiVvDD-----ssdd~t~~li~~~~~~--------------- 276 (352)
..+++-.+||+|||. +.+++||+|+..++||+.+ +.++|+|. |.+.+|.+++-+...+
T Consensus 23 ~~~~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~~~~~~~~~~~~~~~~~ 102 (527)
T PF03142_consen 23 PDKFVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILGDFVDPPEDPEPLSYVS 102 (527)
T ss_pred CCceEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhcccCCCcCCCCCcceEE
Confidence 456888899999998 8999999999999999754 44456663 4566777776654441
Q ss_pred -----------------hhhcC-----------CeEEE-ee----------ccCCCCchHHHHHHHHhcc----------
Q 018646 277 -----------------WQEAG-----------ANIVY-RH----------RILRDGYKAGNLKSAMNCS---------- 307 (352)
Q Consensus 277 -----------------~~~~~-----------v~ii~-~~----------r~~~~G~Ka~aLn~al~~~---------- 307 (352)
|...+ +..+. .. ++.|.| |++..-..++..
T Consensus 103 ~~~g~~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~~NrG-KRDsq~~~~~fl~~~~~~~~~~ 181 (527)
T PF03142_consen 103 LGEGSKQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKPGNRG-KRDSQILLMSFLNKVHFNNPMT 181 (527)
T ss_pred eccCchhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhcccccccCC-chHHHHHHHHHHHHHhcCCCCc
Confidence 00001 22222 22 356666 776443322110
Q ss_pred ----------------CCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 308 ----------------YVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 308 ----------------~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
....+||++.+|||+.+.|+.+.+++..+.+||+++.|.++
T Consensus 182 ~~~~e~~~~i~~~~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~ 238 (527)
T PF03142_consen 182 PLELELFHQIWNIIGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGE 238 (527)
T ss_pred hHHHHHHHHHHHHhccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEece
Confidence 12447999999999999999999999999999999999885
No 72
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=98.69 E-value=5.8e-08 Score=102.18 Aligned_cols=67 Identities=28% Similarity=0.460 Sum_probs=56.3
Q ss_pred EEEeeccCCCC----chHHHHHHHHhcc-CCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCCc----EEEEEecccc
Q 018646 284 IVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKVTKL----IGFFLFESLM 351 (352)
Q Consensus 284 ii~~~r~~~~G----~Ka~aLn~al~~~-~~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp~----vg~Vqtr~~~ 351 (352)
++|+.|++++| +|+||+|..++-+ ..+++++|+.+|+|+. -+|+.+++.+.+|.+ |+ +++||.||.+
T Consensus 168 lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d-~~~g~~~~~vQfpq~f 244 (720)
T PF03552_consen 168 LVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMD-PKIGKKIAFVQFPQRF 244 (720)
T ss_pred EEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhcc-CCCCCeeEEEeCCcee
Confidence 66888888775 5999999987643 3478999999999995 589999999999984 65 9999999975
No 73
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=2.4e-07 Score=90.96 Aligned_cols=112 Identities=16% Similarity=0.157 Sum_probs=87.5
Q ss_pred CCCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCCh-hHHHHHHHHHHHhhhcCCeEEEeeccCCCCch
Q 018646 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDP-TAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (352)
Q Consensus 219 ~~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd-~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~K 296 (352)
++|..||||+-+||+ ..+-+|+.|+++++-++--.|||+|||.|.| +.-..+. +++ ++...++..+.| -
T Consensus 122 dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped~~~L~----ri~----kvr~LRN~~ReG-L 192 (559)
T KOG3738|consen 122 DLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPEDGKLLK----RIP----KVRVLRNNEREG-L 192 (559)
T ss_pred CCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHHHHHHh----hhh----eeeeecccchhh-h
Confidence 799999999999998 8899999999999877666799999996554 4333332 222 444455666666 5
Q ss_pred HHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcE
Q 018646 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLI 342 (352)
Q Consensus 297 a~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~v 342 (352)
....+.|.+ .+.+.++.|+|+.+.+..+||+.++...++|+..
T Consensus 193 irSRvrGAd---vA~a~vltFLDSHcEvN~~WLePLL~Rvaed~tr 235 (559)
T KOG3738|consen 193 IRSRVRGAD---VAQATVLTFLDSHCEVNEGWLEPLLERVAEDTTR 235 (559)
T ss_pred hhhhccccc---cccceEEEEEecceeecchhhHHHHHHHhhcccc
Confidence 555566666 5889999999999999999999999999987653
No 74
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.45 E-value=7.1e-07 Score=87.52 Aligned_cols=120 Identities=18% Similarity=0.148 Sum_probs=92.7
Q ss_pred CCCCCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeC-CCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCC
Q 018646 217 KGFFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (352)
Q Consensus 217 ~~~~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDD-ssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G 294 (352)
..++|++||+|.-+||. ..+.+|+.|++.-+-+.-.-||+++|| |+.+..++-+.+++..+. --+++++.+.+.|
T Consensus 151 pe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLkekLDeYv~~fn---GlVkV~Rne~REG 227 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLKEKLDEYVKLFN---GLVKVFRNERREG 227 (603)
T ss_pred cccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHHHHHHHHHHHhc---CEEEEEecchhhh
Confidence 34799999999999999 999999999998776654567888888 555666666666766554 2344555666666
Q ss_pred chHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEE
Q 018646 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIG 343 (352)
Q Consensus 295 ~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg 343 (352)
-..+...|.++ +.|++++|+||.+.+.-+||..+++.+..|..|.
T Consensus 228 -LI~aRSiGA~~---atGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvm 272 (603)
T KOG3737|consen 228 -LIQARSIGAQK---ATGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVM 272 (603)
T ss_pred -hhhhhccchhh---ccccEEEEEecceeeecccccccccccccCceEE
Confidence 55555555553 7999999999999999999999999998775544
No 75
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.39 E-value=4.4e-07 Score=94.06 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=94.1
Q ss_pred CCCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhH-HHHHHHHHHHhhhcCCeEEEeeccCCCCch
Q 018646 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (352)
Q Consensus 219 ~~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t-~~li~~~~~~~~~~~v~ii~~~r~~~~G~K 296 (352)
.+|.+||||+-+||. .++.+++.|+.+.+-+.-.-||++|||+|+..- ...++++++.+.. +.+++...+.| .
T Consensus 140 ~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~~----v~i~r~~~R~G-L 214 (578)
T KOG3736|consen 140 KLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRFSK----VRILRTKKREG-L 214 (578)
T ss_pred ccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhhcc----eeEEeecchhh-h
Confidence 689999999999998 899999999999876665678999999766543 4456666655442 45556777777 8
Q ss_pred HHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCc
Q 018646 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 297 a~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~ 341 (352)
..|...|.+ .++||+++|+|+-+....+||+-++....+|..
T Consensus 215 IrARl~GA~---~A~geVL~FLDsHcE~n~gWLePLL~~I~~~r~ 256 (578)
T KOG3736|consen 215 IRARLLGAS---MATGEVLTFLDSHCEVNVGWLEPLLARIAEDRK 256 (578)
T ss_pred HHHHhhhhh---hhhchheeeeecceeEecCcchHHHHHhhhcCc
Confidence 888888888 489999999999999999999999999987643
No 76
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=98.29 E-value=2e-06 Score=76.78 Aligned_cols=65 Identities=22% Similarity=0.281 Sum_probs=55.3
Q ss_pred eEEEeeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 283 NIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 283 ~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
+++........++|..|+..+++. .+++|++++.|+|+.++||+|.+++..+++ |++|+|++..+
T Consensus 5 ~lvv~~~~~g~N~Kv~nL~~~~~~--~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~-p~vglVt~~~~ 69 (175)
T PF13506_consen 5 RLVVGGPPRGCNPKVNNLAQGLEA--GAKYDYLVISDSDIRVPPDYLRELVAPLAD-PGVGLVTGLPR 69 (175)
T ss_pred EEEECCCCCCCChHHHHHHHHHHh--hCCCCEEEEECCCeeECHHHHHHHHHHHhC-CCCcEEEeccc
Confidence 355555566667799999999993 289999999999999999999999999995 99999997654
No 77
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=97.88 E-value=8.4e-05 Score=68.70 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=61.0
Q ss_pred EEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHH
Q 018646 223 VLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKS 302 (352)
Q Consensus 223 VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~ 302 (352)
|+||++ .|.++.+++++.++.++..|. -+.+-+|+ ..+..+ -+.+.|.
T Consensus 1 isiI~c-~n~~~~~~~~~~~i~~~~~~~--~~~i~i~~----------------------------~~~~~s-~~~~yN~ 48 (217)
T PF13712_consen 1 ISIIIC-VNDEELYEECLRSIKRLIGPP--GELIEIDN----------------------------VRNAKS-MAAAYNE 48 (217)
T ss_dssp EEEEEE-ES-HHHHHHHHHHHHHTT--T--EEEEEEE-----------------------------SSS-S--TTTHHHH
T ss_pred CEEEEE-ECCHHHHHHHHHHHHhhCCCC--ceEEEEec----------------------------cCCCcC-HHHHHHH
Confidence 355554 566668889999999998887 33343332 111123 6778999
Q ss_pred HHhccCCCCccEEEEEcCCCCC-ChHHHHHHHHHHhcCCcEEEEE
Q 018646 303 AMNCSYVKDYEFVAIFDADFQP-NPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 303 al~~~~~a~gd~V~~lDAD~~~-~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
|+++ ++++|++|++.|..+ +++|+.+++..|+++|++|+++
T Consensus 49 a~~~---a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iG 90 (217)
T PF13712_consen 49 AMEK---AKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIG 90 (217)
T ss_dssp HGGG-----SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEE
T ss_pred HHHh---CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEE
Confidence 9995 899999999999976 7999999999997789987775
No 78
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=97.69 E-value=0.00017 Score=57.35 Aligned_cols=85 Identities=20% Similarity=0.233 Sum_probs=57.4
Q ss_pred cCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCch-HHHHHHHHhccC
Q 018646 230 CNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK-AGNLKSAMNCSY 308 (352)
Q Consensus 230 yNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~K-a~aLn~al~~~~ 308 (352)
+||+..+.+.|...+++.+.. ++|+||+|+|.+.+++++. .++.++....+...... ....+...++
T Consensus 1 rne~~~L~~wl~~~~~lG~d~----i~i~d~~s~D~t~~~l~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~-- 68 (97)
T PF13704_consen 1 RNEADYLPEWLAHHLALGVDH----IYIYDDGSTDGTREILRAL------PGVGIIRWVDPYRDERRQRAWRNALIER-- 68 (97)
T ss_pred CChHHHHHHHHHHHHHcCCCE----EEEEECCCCccHHHHHHhC------CCcEEEEeCCCccchHHHHHHHHHHHHh--
Confidence 699999999999998886653 7889999999998887642 34555544332222212 2233333332
Q ss_pred CCCccEEEEEcCCCCCCh
Q 018646 309 VKDYEFVAIFDADFQPNP 326 (352)
Q Consensus 309 ~a~gd~V~~lDAD~~~~p 326 (352)
..+++|++++|+|-.+.+
T Consensus 69 ~~~~dWvl~~D~DEfl~~ 86 (97)
T PF13704_consen 69 AFDADWVLFLDADEFLVP 86 (97)
T ss_pred CCCCCEEEEEeeeEEEec
Confidence 357899999999987543
No 79
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=97.63 E-value=0.00088 Score=63.79 Aligned_cols=117 Identities=17% Similarity=0.211 Sum_probs=78.7
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEE-EEEeCCC-ChhHHHHHHHHHHHhhh------cCCeEEEeecc
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILI-QVLDDSD-DPTAQTLIKEEVLKWQE------AGANIVYRHRI 290 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leI-iVvDDss-dd~t~~li~~~~~~~~~------~~v~ii~~~r~ 290 (352)
.-++|.|+.|..|-+..+.+-+..+.+++||++.+.+ +++.|++ .|.+.+.+++..++.+. .--.+......
T Consensus 23 ~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~~d 102 (269)
T PF03452_consen 23 NKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILRKD 102 (269)
T ss_pred cCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEcCC
Confidence 5689999999999999999999999999999999888 5555655 25555566655544432 11122222211
Q ss_pred C----------CCC---------chHHHHHHHHhccCCCCccEEEEEcCCCC-CChHHHHHHHHH
Q 018646 291 L----------RDG---------YKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPH 335 (352)
Q Consensus 291 ~----------~~G---------~Ka~aLn~al~~~~~a~gd~V~~lDAD~~-~~pd~L~~lv~~ 335 (352)
- +.. .-+.+.|..+........+||+.+|+|.+ .+|+.|++++.+
T Consensus 103 f~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~~ 167 (269)
T PF03452_consen 103 FGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIAH 167 (269)
T ss_pred CcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHhC
Confidence 1 111 02334566555544457899999999997 588888888764
No 80
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=97.54 E-value=0.00042 Score=70.01 Aligned_cols=122 Identities=22% Similarity=0.317 Sum_probs=69.9
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc--------
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI-------- 290 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~-------- 290 (352)
..+.+-|+|-+||.++.+.+||++|++..-..+++.|+|..||+++.+.+.++.+.. .+. +++..
T Consensus 91 ~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~y~~-----~v~--~i~~~~~~~i~~~ 163 (434)
T PF03071_consen 91 KEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKSYGD-----QVT--YIQHPDFSPITIP 163 (434)
T ss_dssp ------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHGGGG-----GSE--EEE-S--S-----
T ss_pred CCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHHhhh-----hhe--eeecCCcCCceeC
Confidence 467889999999999999999999998653335678999999999998877764311 122 11111
Q ss_pred CCC----Cch--HHHHHHHHhccC-CCCccEEEEEcCCCCCChHHHH---HHHHHHhcCCcEEEEEe
Q 018646 291 LRD----GYK--AGNLKSAMNCSY-VKDYEFVAIFDADFQPNPDFLR---RTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 291 ~~~----G~K--a~aLn~al~~~~-~a~gd~V~~lDAD~~~~pd~L~---~lv~~f~~dp~vg~Vqt 347 (352)
+.. |+. +.-...|+.+.. .-+++.|+++..|..+.|||++ .+.+.+++||.+-+|.+
T Consensus 164 ~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSa 230 (434)
T PF03071_consen 164 PKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISA 230 (434)
T ss_dssp TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES
T ss_pred cccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEc
Confidence 110 111 111122444321 2468999999999999999775 45666788999999875
No 81
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=96.88 E-value=0.0076 Score=59.25 Aligned_cols=107 Identities=17% Similarity=0.257 Sum_probs=61.7
Q ss_pred CCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhH---H---HHHHHHHHHhhhcCCeEEEeecc--
Q 018646 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA---Q---TLIKEEVLKWQEAGANIVYRHRI-- 290 (352)
Q Consensus 220 ~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t---~---~li~~~~~~~~~~~v~ii~~~r~-- 290 (352)
.-...|+||+.||. ..++-.|.+ -|+ ...||||.+|..+.. . ++++.+... .+. .++.+|..
T Consensus 50 ~~~mAIVVP~KdE~l~lleGVL~g-----IPh-~c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~-t~r--~~i~vHQkDp 120 (393)
T PRK14503 50 LGRMAIVVPVKNERLKLLEGVLKG-----IPH-ECPIIVVSNSKREPPDRFKLEVDLVRHFYRL-TQR--PIIIVHQKDP 120 (393)
T ss_pred HhCcEEEEEcCCCchhHHhhHhhc-----CCC-CCeEEEEeCCCCCCchHHHHHHHHHHHHHhh-hcC--ceEEEEcCCH
Confidence 45689999999998 555555554 455 355788888765322 1 222222211 111 22222221
Q ss_pred --------------------CCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 291 --------------------LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 291 --------------------~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
-+.| |+.++-.|+-.......+||.|+|||..++ +.+.+.+..|.
T Consensus 121 ~la~Af~~aGyp~il~~~g~VR~G-KgEGMiiG~lLAk~~g~~YVGFiDADNyiP-GaV~EYvk~yA 185 (393)
T PRK14503 121 GLAEALKEAGYPYILDENGLVRSG-KGEGMIIGLLLAKALGARYVGFVDADNYIP-GAVNEYVKIYA 185 (393)
T ss_pred HHHHHHHHcCChhhhCCCCceecC-cchHHHHHHHHHHHhCCCeEeEeecccCCC-chHHHHHHHHH
Confidence 2234 888877765432234679999999999875 44445555554
No 82
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=96.86 E-value=0.0083 Score=58.67 Aligned_cols=107 Identities=19% Similarity=0.255 Sum_probs=61.5
Q ss_pred CCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHH------HHHHHHHHHhhhcCCeEEEeecc--
Q 018646 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ------TLIKEEVLKWQEAGANIVYRHRI-- 290 (352)
Q Consensus 220 ~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~------~li~~~~~~~~~~~v~ii~~~r~-- 290 (352)
.....|+||+.||. ..++-.|.+ -|. ...|+||.+|+.+... ++++.+... .+. .++.+|..
T Consensus 49 ~~~maIVVP~KdE~l~lleGVL~g-----IPh-~c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~-t~r--~~i~vHQkDp 119 (381)
T TIGR02460 49 LGKTAIVVPVKNEKLHLLEGVLSG-----IPH-ECPIIIVSNSKREPPDRFKMEVDLIRHFSNL-THR--KIIIIHQKDP 119 (381)
T ss_pred HhCcEEEEEcCCCchhHHhhHhhc-----CCC-CCeEEEEeCCCCCChhHHHHHHHHHHHHHHh-hcC--ceEEEEcCCH
Confidence 45789999999998 555555554 455 3557888887653221 222222211 111 22222221
Q ss_pred --------------------CCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 291 --------------------LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 291 --------------------~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
-+.| |+.++-.|+-.......+||.|+|||...+- .+.+.+..+.
T Consensus 120 ~la~Af~~~gy~~il~~~g~VR~G-KgEGMiiG~lLAk~~g~~YVGFiDaDNyiPG-aV~EYvk~yA 184 (381)
T TIGR02460 120 ALAEAFKEVGYTSILGENGRVRSG-KGEGMLLGLLLAKAIGAEYVGFVDADNYFPG-AVNEYVKIYA 184 (381)
T ss_pred HHHHHHHHcCchhhhCCCCceecC-cchHHHHHHHHHHHhCCceEeEeecccCCCc-hHHHHHHHHH
Confidence 2234 8888777654322346799999999998754 4445555544
No 83
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=96.78 E-value=0.0099 Score=58.41 Aligned_cols=106 Identities=20% Similarity=0.304 Sum_probs=54.4
Q ss_pred CCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCC---hhHH---HHHHHHHHHhhhcCCeEEEeecc--
Q 018646 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDD---PTAQ---TLIKEEVLKWQEAGANIVYRHRI-- 290 (352)
Q Consensus 220 ~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssd---d~t~---~li~~~~~~~~~~~v~ii~~~r~-- 290 (352)
+....|+||+.||. ..++-.|.+ -|. ...||||.+|+. |.-. ++++++. ...+-+++.+|..
T Consensus 49 l~~maIVVP~KnE~l~lleGVL~g-----IPh-~C~IIvVSNS~r~~~d~f~~E~d~l~~f~---~~t~r~~~~vHQkDp 119 (381)
T PF09488_consen 49 LSKMAIVVPCKNEKLKLLEGVLSG-----IPH-DCLIIVVSNSSREPVDRFKMEVDLLKHFC---RLTRRQIIIVHQKDP 119 (381)
T ss_dssp HTTEEEEEEESS--HHHHHHHHHC-----S-T-TSEEEEEE---CSSSCHHHHHHHHHHHHH---HHCT--EEEEETT-H
T ss_pred HhCcEEEEECCCCchhhhhhhhhc-----CCC-CCeEEEEECCCCCCccHHHHHHHHHHHHH---HhhcCceEEEecCCH
Confidence 45689999999998 566555554 354 355788888776 4332 2333222 2222233334432
Q ss_pred --------------------CCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 018646 291 --------------------LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (352)
Q Consensus 291 --------------------~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f 336 (352)
-+.| |+.++-.|+-......-+||.|+|||...+ +.+.+.+..|
T Consensus 120 ~lA~Af~~aGy~~il~~~g~VR~G-KgEGMiiGillAk~~g~~YVGFvDADNyiP-GaV~EYvk~y 183 (381)
T PF09488_consen 120 GLAEAFKEAGYPEILDEDGLVRNG-KGEGMIIGILLAKAPGKRYVGFVDADNYIP-GAVNEYVKDY 183 (381)
T ss_dssp HHHHHHHHTT--TTB-TTSSB-SS-HHHHHHHHHHHHHHTT-SEEEE--TTBS-H-HHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHhCCCCceecC-chHHHHHHHHHHHhcCCceEeEeeccCCCc-chHHHHHHHH
Confidence 2234 998887765543235679999999999874 4444444444
No 84
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=96.19 E-value=0.024 Score=61.57 Aligned_cols=39 Identities=23% Similarity=0.295 Sum_probs=35.9
Q ss_pred CCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 310 KDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 310 a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
.+-++|.++|+|+.+.|+.+.++++.|+.||+||+++++
T Consensus 439 ~~v~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG~ 477 (862)
T KOG2571|consen 439 PSVDYILVVDADTRLDPDALYHLVKVFDEDPQVGGACGR 477 (862)
T ss_pred CcceEEEEecCCCccCcHHHHHHHHHhccCcccceeccc
Confidence 345799999999999999999999999999999999985
No 85
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=96.19 E-value=0.057 Score=50.64 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=61.6
Q ss_pred HHHHHHcCCCCCCeeEEE-EEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCccEEEE
Q 018646 239 SIAAVCNLDWPKSKILIQ-VLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAI 317 (352)
Q Consensus 239 tL~sl~~qdyP~~~leIi-VvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~ 317 (352)
|+.|+.+|+-|+ +..+ +.|+...+...+.++++.+.++ .++++ ..++ +....+++.+++......+++++.
T Consensus 47 ~LpSl~~QTd~d--F~~lv~~~~~~P~~~~~rL~~l~~~~p--~~~i~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 118 (234)
T PF11316_consen 47 CLPSLRAQTDQD--FTWLVLFDDDLPEPYRERLRDLLADYP--QFRIV--FRPP--GPHRDAMRRAINAARRDGADPVLQ 118 (234)
T ss_pred HhhHHHhccCCC--eEEEEEECCCCCHHHHHHHHHHhccCC--CcEEE--ecCC--chHHHHHHHHHhhhccCCCCEEEE
Confidence 799999999997 5554 4666777766666666655554 23433 3333 325567777763322345666655
Q ss_pred E--cCCCCCChHHHHHHHHHHh
Q 018646 318 F--DADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 318 l--DAD~~~~pd~L~~lv~~f~ 337 (352)
+ |+|+.++.||++++-.+..
T Consensus 119 ~RLDdDDAl~~dFV~rlr~~a~ 140 (234)
T PF11316_consen 119 FRLDDDDALHRDFVARLRRAAA 140 (234)
T ss_pred EEECCcchhhHHHHHHHHHHHH
Confidence 5 9999999999999999984
No 86
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.18 E-value=0.036 Score=59.14 Aligned_cols=107 Identities=16% Similarity=0.290 Sum_probs=62.3
Q ss_pred CCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHH------HHHHHHHHHhhhcCCeEEEeecc--
Q 018646 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ------TLIKEEVLKWQEAGANIVYRHRI-- 290 (352)
Q Consensus 220 ~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~------~li~~~~~~~~~~~v~ii~~~r~-- 290 (352)
.....|+||+.||. ..++-.|.+ -|+ ...||||.+|+..... ++++.+.+. .+. +++.+|..
T Consensus 54 ~~~~aivvp~k~e~~~~~~gvl~~-----ip~-~c~ii~vsns~r~~~d~~~~e~~~~~~~~~~-~~~--~~~~vhq~dp 124 (694)
T PRK14502 54 EKKMAIVLPIKDEDLKVFEGVLSG-----IPH-DCLMIVISNSSKQEVDNFKNEKDIVNRFCRI-THR--QAIVVHQKNP 124 (694)
T ss_pred HhCcEEEEEcCCCchhHHhhHhhc-----CCC-CCeEEEEeCCCCCchHHHHHHHHHHHHHHHh-hcC--ceEEEEcCCH
Confidence 45789999999998 555555554 455 3557888887753221 122222211 111 22222211
Q ss_pred --------------------CCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 291 --------------------LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 291 --------------------~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
-+.| |+.++-.|+-.......+||.|+|||..++- .+.+.+..+.
T Consensus 125 ~~a~a~~~~g~~~~~~~~~~vr~g-k~egm~~g~~la~~~g~~yvgfidadny~pg-~v~ey~~~ya 189 (694)
T PRK14502 125 ELANAIADAGYPELLGEDGLIRSG-KAEGMILGIILTMFSGRDYVGFIDTDNYIPG-AVWEYAKHFA 189 (694)
T ss_pred HHHHHHHHcCChhhhCCCCceecC-cchHHHHHHHHHHhcCCceEeEeeccCCCCc-hHHHHHHHHH
Confidence 2234 8888877665432456799999999998754 4445555554
No 87
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=95.33 E-value=0.28 Score=45.62 Aligned_cols=102 Identities=15% Similarity=0.130 Sum_probs=67.4
Q ss_pred CeEEEEEeccCCc---hhHHHHHHHHHcCCCCCCeeEEEEEeCCC--ChhHHHHHHHHHHHhhhcCCeEEEeeccCC---
Q 018646 221 PMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILR--- 292 (352)
Q Consensus 221 P~VsViIPayNE~---~vl~~tL~sl~~qdyP~~~leIiVvDDss--dd~t~~li~~~~~~~~~~~v~ii~~~r~~~--- 292 (352)
|.+.||-|||... ..+.+.-..+..- |+ +.-|||+|+. ++.+.++++ +.|+...++.-+.+
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~lV--p~--l~WIVVEd~~~~t~~va~lL~-------~sgl~y~HL~~~~~~~~ 69 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLRLV--PP--LHWIVVEDSEEKTPLVAELLR-------RSGLMYTHLNAKTPSDP 69 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHhcC--Cc--eEEEEEeCCCCCCHHHHHHHH-------HcCCceEEeccCCCCCc
Confidence 5789999999987 4555555555554 44 7778999964 555666655 55666665543322
Q ss_pred CCc---hHHHHHHHHhccC-C---CCccEEEEEcCCCCCChHHHHHHH
Q 018646 293 DGY---KAGNLKSAMNCSY-V---KDYEFVAIFDADFQPNPDFLRRTV 333 (352)
Q Consensus 293 ~G~---Ka~aLn~al~~~~-~---a~gd~V~~lDAD~~~~pd~L~~lv 333 (352)
... -....|.|+++.. . ...-+|.|.|.|...+-++.+++-
T Consensus 70 ~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~emR 117 (223)
T cd00218 70 TWLKPRGVEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEMR 117 (223)
T ss_pred ccCCcccHHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHHh
Confidence 111 1346677887652 1 355899999999999999888843
No 88
>PLN02458 transferase, transferring glycosyl groups
Probab=95.07 E-value=0.35 Score=47.33 Aligned_cols=104 Identities=12% Similarity=0.061 Sum_probs=66.4
Q ss_pred CCCeEEEEEeccCC-c---hhHHHHHHHHHcCCCCCCeeEEEEEeCC-CChhHHHHHHHHHHHhhhcCCeEEEeeccCCC
Q 018646 219 FFPMVLVQIPMCNE-K---EVYQQSIAAVCNLDWPKSKILIQVLDDS-DDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293 (352)
Q Consensus 219 ~~P~VsViIPayNE-~---~vl~~tL~sl~~qdyP~~~leIiVvDDs-sdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~ 293 (352)
..+.+.||.|||.. . ..+.+.-..|..-.+| +.-|||+|+ ..+++.++++ +-|+..+++.-+.+.
T Consensus 110 ~~rlIivVTPTY~rR~~Q~a~LTRLahTL~lVp~p---L~WIVVEd~~~t~~va~lLr-------rsGl~y~HL~~k~~~ 179 (346)
T PLN02458 110 PRRLVIIVTPISTKDRYQGVLLRRLANTLRLVPPP---LLWIVVEGQSDSEEVSEMLR-------KTGIMYRHLVFKENF 179 (346)
T ss_pred CCceEEEECCCCCCcchhHHHHHHHHHHHhcCCCC---ceEEEEeCCCCCHHHHHHHH-------HcCCceEEeccCCCC
Confidence 45679999999983 3 4555555555554433 556788874 4445555554 556665555433222
Q ss_pred ----CchHHHHHHHHhccC-CCCccEEEEEcCCCCCChHHHHHH
Q 018646 294 ----GYKAGNLKSAMNCSY-VKDYEFVAIFDADFQPNPDFLRRT 332 (352)
Q Consensus 294 ----G~Ka~aLn~al~~~~-~a~gd~V~~lDAD~~~~pd~L~~l 332 (352)
+......|.||++.. ....-+|.|.|.|...+-++.+++
T Consensus 180 ~~~~~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEm 223 (346)
T PLN02458 180 TDPEAELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEI 223 (346)
T ss_pred CCccchhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHH
Confidence 112345788887651 234589999999999998888875
No 89
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=95.02 E-value=0.2 Score=51.97 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=70.9
Q ss_pred CCeEEEEEeccCC-chhHHHHHHHHHc---CCCCCCeeEE-EEEeCC--CCh---hHHHHHHHHHHHhhhcCCeEEEeec
Q 018646 220 FPMVLVQIPMCNE-KEVYQQSIAAVCN---LDWPKSKILI-QVLDDS--DDP---TAQTLIKEEVLKWQEAGANIVYRHR 289 (352)
Q Consensus 220 ~P~VsViIPayNE-~~vl~~tL~sl~~---qdyP~~~leI-iVvDDs--sdd---~t~~li~~~~~~~~~~~v~ii~~~r 289 (352)
-..|.||||..+. .+.+.+-++...+ +. ++.... +|+.-+ +.+ .+.++++++.++++...+.++ ..
T Consensus 246 ~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~--~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i--~~ 321 (499)
T PF05679_consen 246 STRVHIIVPLSGREADWFRRFLENFEKVCLET--DDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWI--SV 321 (499)
T ss_pred CCEEEEEEEecCccHHHHHHHHHHHHHHhccc--CCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEE--Ee
Confidence 4799999999999 6555555544333 22 222333 333322 112 233456666666655555554 33
Q ss_pred cCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 018646 290 ILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (352)
Q Consensus 290 ~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f 336 (352)
..+.-.++.++..|++. ....+++.++|-|..+++++|.++-..-
T Consensus 322 ~~~~fsr~~~Ld~g~~~--~~~d~L~f~~Dvd~~f~~~fL~rcR~nt 366 (499)
T PF05679_consen 322 KTGEFSRGAALDVGAKK--FPPDSLLFFCDVDMVFTSDFLNRCRMNT 366 (499)
T ss_pred cCCCccHHHHHHhhccc--CCCCcEEEEEeCCcccCHHHHHHHHHhh
Confidence 32333488899999885 3567999999999999999999986653
No 90
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=94.72 E-value=0.36 Score=46.84 Aligned_cols=101 Identities=16% Similarity=0.175 Sum_probs=71.0
Q ss_pred CCeEEEEEeccCCc---hhHHHHHHHHHcCCCCCCeeEEEEEeCC--CChhHHHHHHHHHHHhhhcCCeEEEeeccCCCC
Q 018646 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDS--DDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (352)
Q Consensus 220 ~P~VsViIPayNE~---~vl~~tL~sl~~qdyP~~~leIiVvDDs--sdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G 294 (352)
.|+|-||-|+|+.. ..+.+.-..+.. .|+ +.-|||+|+ ..+++..+++ +-|+...+...+...+
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~~--V~n--LhWIVVEd~~~~~p~v~~~L~-------rtgl~ythl~~~t~~~ 154 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLRL--VPN--LHWIVVEDGEGTTPEVSGILR-------RTGLPYTHLVHKTPMG 154 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHhh--cCC--eeEEEEecCCCCCHHHHHHHH-------HcCCceEEEeccCCCC
Confidence 79999999999997 333333444443 454 667888886 4556666665 6677777777666677
Q ss_pred ch----HHHHHHHHhccC------CCCccEEEEEcCCCCCChHHHHH
Q 018646 295 YK----AGNLKSAMNCSY------VKDYEFVAIFDADFQPNPDFLRR 331 (352)
Q Consensus 295 ~K----a~aLn~al~~~~------~a~gd~V~~lDAD~~~~pd~L~~ 331 (352)
+| -...|.|+.+.- ....-+|-|-|.|...+-+..++
T Consensus 155 ~~~~rg~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e 201 (330)
T KOG1476|consen 155 YKARRGWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE 201 (330)
T ss_pred CccccchhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH
Confidence 77 446677776542 14567889999999999888877
No 91
>PLN02917 CMP-KDO synthetase
Probab=94.24 E-value=1.6 Score=42.09 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=59.9
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
...+..+++.+.+..... .|+|. .+++.+.+.++ ..++.++.. .....|+-.+ +..|++.. ..+.
T Consensus 72 kPLL~~vi~~a~~~~~~~---~VVV~--~~~e~I~~~~~-------~~~v~vi~~-~~~~~~GT~~-~~~a~~~l-~~~~ 136 (293)
T PLN02917 72 KPMIQRTWERAKLATTLD---HIVVA--TDDERIAECCR-------GFGADVIMT-SESCRNGTER-CNEALKKL-EKKY 136 (293)
T ss_pred EEHHHHHHHHHHcCCCCC---EEEEE--CChHHHHHHHH-------HcCCEEEeC-CcccCCchHH-HHHHHHhc-cCCC
Confidence 358888899888754222 24444 33445444332 335554432 2223343443 35677642 2347
Q ss_pred cEEEEEcCCCC-CChHHHHHHHHHHhcCCcEEEE
Q 018646 313 EFVAIFDADFQ-PNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 313 d~V~~lDAD~~-~~pd~L~~lv~~f~~dp~vg~V 345 (352)
|+|+++++|.- +.++.+++++..+.++++..+.
T Consensus 137 d~Vlil~gD~PlI~~~tI~~li~~~~~~~~~iv~ 170 (293)
T PLN02917 137 DIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 170 (293)
T ss_pred CEEEEecCCcCCCCHHHHHHHHHHHHhcCCceEE
Confidence 89999999995 7999999999988766655443
No 92
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=93.80 E-value=0.68 Score=41.03 Aligned_cols=52 Identities=13% Similarity=0.155 Sum_probs=37.5
Q ss_pred CeEEEeeccCCCCchHHHHHH---HHhccCCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 018646 282 ANIVYRHRILRDGYKAGNLKS---AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (352)
Q Consensus 282 v~ii~~~r~~~~G~Ka~aLn~---al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f 336 (352)
+++++.-.+.|.| |-..-.. |+.. .-+.++++++|+.+.|.++.|.++...|
T Consensus 109 vQ~ifclKe~N~k-KinSHrWfFnaf~~--~l~P~vcvllDvGT~P~~~siy~Lwkaf 163 (163)
T PF01644_consen 109 VQIIFCLKEKNAK-KINSHRWFFNAFCR--QLQPNVCVLLDVGTKPGKDSIYHLWKAF 163 (163)
T ss_pred EEEEEEecccccc-ccchhhHHHHHHHh--hcCCcEEEEEecCCCcCchHHHHHHhhC
Confidence 4455555666666 6554444 3333 3578999999999999999999987765
No 93
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=93.51 E-value=0.68 Score=45.73 Aligned_cols=128 Identities=16% Similarity=0.128 Sum_probs=85.2
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhh------cCCeEEEeec-cC
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE------AGANIVYRHR-IL 291 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~------~~v~ii~~~r-~~ 291 (352)
..|.+-|++=+||.++.++.++..++.+.-..+++-|+|.-|+++..+.+.++.+.+.... ....+.+..+ ..
T Consensus 65 ~~~v~pvvVf~csR~~~lr~~v~kll~yrPsaekfpiiVSQD~~~e~vk~~~~~~g~~v~~i~~~~h~~~ei~v~~~~~k 144 (411)
T KOG1413|consen 65 WPPVIPVVVFACSRADALRRHVKKLLEYRPSAEKFPIIVSQDCEKEAVKKKLLSYGSDVSHIQHPMHLKDEISVPPRHKK 144 (411)
T ss_pred CCCceeEEEEecCcHHHHHHHHHHHHHhCcchhhcCEEEeccCCcHHHHHHHHHhccchhhhcCccccccccccCCcccc
Confidence 4577889999999999999999999998733467788999999999888777655333210 1111111111 12
Q ss_pred CCCchHHHHHH--HHhcc-CCCCccEEEEEcCCCCCChHHHHHH---HHHHhcCCcEEEEE
Q 018646 292 RDGYKAGNLKS--AMNCS-YVKDYEFVAIFDADFQPNPDFLRRT---VPHFKVTKLIGFFL 346 (352)
Q Consensus 292 ~~G~Ka~aLn~--al~~~-~~a~gd~V~~lDAD~~~~pd~L~~l---v~~f~~dp~vg~Vq 346 (352)
..+++.-|..+ |+.+. ....++.+++.-.|.-..|||.... ...++.||.+-+|+
T Consensus 145 ~~~Yy~IarHYkwAL~q~F~~~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~siwcvs 205 (411)
T KOG1413|consen 145 FNAYYKIARHYKWALNQLFIVFRESRVIITEDDLNIAPDFFSYFRNTIILLKGDPSIWCVS 205 (411)
T ss_pred cchhHHHHHHHHHHHhhHHhhcCCceeEEecchhhhhhHHHHHHHHHHHHHhcCCceEEee
Confidence 22333332222 34333 1467899999999999999987654 44577888888884
No 94
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=93.17 E-value=2 Score=37.24 Aligned_cols=96 Identities=16% Similarity=0.206 Sum_probs=58.3
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc-CCCCchHHHHHHHHhccCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI-LRDGYKAGNLKSAMNCSYV 309 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~-~~~G~Ka~aLn~al~~~~~ 309 (352)
+....++.+++.+.+.. .++ |+|+-+..+....+.. ...++.++ ... ...| ...++..|+++. .
T Consensus 24 ~g~~li~~~i~~l~~~~--~~~--i~vv~~~~~~~~~~~~-------~~~~~~~~--~~~~~~~G-~~~~i~~al~~~-~ 88 (186)
T cd04182 24 DGKPLLRHALDAALAAG--LSR--VIVVLGAEADAVRAAL-------AGLPVVVV--INPDWEEG-MSSSLAAGLEAL-P 88 (186)
T ss_pred CCeeHHHHHHHHHHhCC--CCc--EEEECCCcHHHHHHHh-------cCCCeEEE--eCCChhhC-HHHHHHHHHHhc-c
Confidence 44568888899888752 223 3443332222222111 12334332 222 2234 778889999862 1
Q ss_pred CCccEEEEEcCCC-CCChHHHHHHHHHHhcCCc
Q 018646 310 KDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 310 a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~ 341 (352)
.+.|+++++.+|. .++++.+++++..+..++.
T Consensus 89 ~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~ 121 (186)
T cd04182 89 ADADAVLILLADQPLVTAETLRALIDAFREDGA 121 (186)
T ss_pred ccCCEEEEEeCCCCCCCHHHHHHHHHHHHhCCC
Confidence 1379999999999 6799999999998875444
No 95
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=92.80 E-value=1.3 Score=37.78 Aligned_cols=104 Identities=18% Similarity=0.261 Sum_probs=67.6
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|. +....++.+++.+.+.... + |+|+-.. +...+.. ...++.++.. .....| -..++..|+.+
T Consensus 19 ~~i-~g~~li~~~l~~l~~~~~~--~--Ivvv~~~--~~~~~~~-------~~~~~~~v~~-~~~~~G-~~~sl~~a~~~ 82 (160)
T PF12804_consen 19 LPI-GGKPLIERVLEALREAGVD--D--IVVVTGE--EEIYEYL-------ERYGIKVVVD-PEPGQG-PLASLLAALSQ 82 (160)
T ss_dssp SEE-TTEEHHHHHHHHHHHHTES--E--EEEEEST--HHHHHHH-------TTTTSEEEE--STSSCS-HHHHHHHHHHT
T ss_pred eeE-CCccHHHHHHHHhhccCCc--e--EEEecCh--HHHHHHH-------hccCceEEEe-ccccCC-hHHHHHHHHHh
Confidence 444 5667888889888876422 3 4444443 3332222 2456776533 223445 88899999995
Q ss_pred cCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC-CcEEEEEec
Q 018646 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT-KLIGFFLFE 348 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d-p~vg~Vqtr 348 (352)
..+.+.++++.+|. .++++.+++++..+.++ +++.++..+
T Consensus 83 --~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~~~ 124 (160)
T PF12804_consen 83 --LPSSEPVLVLPCDQPFLSPELLRRLLEALEKSPADIVVPVFR 124 (160)
T ss_dssp --STTSSEEEEEETTETTS-HHHHHHHHHHHHHTTTSEEEEEET
T ss_pred --cccCCCcEEEeCCccccCHHHHHHHHHHHhccCCcEEEEEEC
Confidence 22789999999999 46999999999999754 456655543
No 96
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=92.31 E-value=3.3 Score=36.13 Aligned_cols=101 Identities=13% Similarity=0.162 Sum_probs=60.1
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+.+... +++ ++|+.+.. +. +.+.+.. ..++.++.. .....| ...++..|++. ..
T Consensus 23 ~g~pll~~~i~~l~~~~~--~~i-ivv~~~~~-~~---~~~~~~~---~~~v~~v~~-~~~~~g-~~~si~~~l~~--~~ 88 (188)
T TIGR03310 23 KGKTILEHVVDNALRLFF--DEV-ILVLGHEA-DE---LVALLAN---HSNITLVHN-PQYAEG-QSSSIKLGLEL--PV 88 (188)
T ss_pred CCeeHHHHHHHHHHHcCC--CcE-EEEeCCcH-HH---HHHHhcc---CCCeEEEEC-cChhcC-HHHHHHHHhcC--CC
Confidence 345688889988886532 222 34444432 22 1221111 234444322 122234 66778888872 24
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEE
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
+.|.++++++|. .+.++.+++++..+..+++..++
T Consensus 89 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~ 124 (188)
T TIGR03310 89 QSDGYLFLLGDQPFVTPDIIQLLLEAFALKNDEIVV 124 (188)
T ss_pred CCCEEEEEeCCcCCCCHHHHHHHHHHHHhCCCcEEE
Confidence 578999999999 57999999999988766654433
No 97
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=92.26 E-value=2.6 Score=38.07 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=61.0
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|.-+. ..+..++.++.+... +++ +|+-....+...+.+. ..++.++ .+....| .++++..|+..
T Consensus 21 ~~v~gk-pli~~~i~~l~~~~i--~~i--~iv~~~~~~~i~~~~~-------~~~~~~~--~~~~~~g-~~~ai~~a~~~ 85 (229)
T cd02540 21 HPLAGK-PMLEHVLDAARALGP--DRI--VVVVGHGAEQVKKALA-------NPNVEFV--LQEEQLG-TGHAVKQALPA 85 (229)
T ss_pred ceeCCc-cHHHHHHHHHHhCCC--CeE--EEEECCCHHHHHHHhC-------CCCcEEE--ECCCCCC-CHHHHHHHHHh
Confidence 454454 789999999987542 233 3332322333333322 2345443 3444445 88899999885
Q ss_pred cCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
. ..+.|.++++++|. ...++.+.+++..+.++
T Consensus 86 ~-~~~~~~vli~~~D~p~~~~~~i~~l~~~~~~~ 118 (229)
T cd02540 86 L-KDFEGDVLVLYGDVPLITPETLQRLLEAHREA 118 (229)
T ss_pred h-ccCCCeEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 3 11268899999999 56889999999888653
No 98
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=92.16 E-value=2.8 Score=39.49 Aligned_cols=112 Identities=10% Similarity=0.128 Sum_probs=69.3
Q ss_pred EEEEEeccCCchhHHHHHH-HHHc---CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCC-----
Q 018646 223 VLVQIPMCNEKEVYQQSIA-AVCN---LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD----- 293 (352)
Q Consensus 223 VsViIPayNE~~vl~~tL~-sl~~---qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~----- 293 (352)
|.|-.-.||.++.+..... ++++ .--| +.+-|.|.+++|.|.|.+.++.+.......+++-.+.......
T Consensus 2 ~fIA~~l~~~~~iL~~~~~~~ll~li~~LGp-~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~ 80 (241)
T PF11735_consen 2 YFIAANLYNNEDILPSLWGDALLELIRFLGP-ENVFVSIYESGSWDGTKEALRALDAELDALGVPHSIVLSDITHRDEIE 80 (241)
T ss_pred EEEEEEcccCHhHHHHHHHHHHHHHHHHhCc-CeEEEEEEeCCCCccHHHHHHHHHHHHHhCCCCeEEEeCCCccccccc
Confidence 4455567877766665544 4443 2233 4688899999999999999988877777777765544422111
Q ss_pred --------CchHHHHHHHHhccC------CCCccEEEEEcCCCCCChHHHHHHHHHH
Q 018646 294 --------GYKAGNLKSAMNCSY------VKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (352)
Q Consensus 294 --------G~Ka~aLn~al~~~~------~a~gd~V~~lDAD~~~~pd~L~~lv~~f 336 (352)
.+-+.-.|.||+=.+ ..+.+.|+|++ |....+.=+-+++..-
T Consensus 81 ~~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~ 136 (241)
T PF11735_consen 81 RPPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTR 136 (241)
T ss_pred ccchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhc
Confidence 112344566665322 24568899999 7777655444555443
No 99
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=91.67 E-value=2.3 Score=37.89 Aligned_cols=97 Identities=15% Similarity=0.204 Sum_probs=58.1
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..|. ..+..++.++.+.... ++ ++++.. ..+.+.+.+. .....+.++.+.......| -++++..++.+
T Consensus 24 l~v~g~-pli~~~l~~l~~~g~~--~i-~vv~~~-~~~~i~~~~~----~~~~~~~~i~~~~~~~~~g-~~~al~~~~~~ 93 (217)
T cd04181 24 LPIAGK-PILEYIIERLARAGID--EI-ILVVGY-LGEQIEEYFG----DGSKFGVNIEYVVQEEPLG-TAGAVRNAEDF 93 (217)
T ss_pred cEECCe-eHHHHHHHHHHHCCCC--EE-EEEecc-CHHHHHHHHc----ChhhcCceEEEEeCCCCCc-cHHHHHHhhhh
Confidence 344554 7999999999886533 33 233333 3333333222 1111345555554444445 78889888885
Q ss_pred cCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 307 SYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
. ..+.++++++|.+...++.+ ++.++.
T Consensus 94 ~---~~~~~lv~~~D~~~~~~~~~-~~~~~~ 120 (217)
T cd04181 94 L---GDDDFLVVNGDVLTDLDLSE-LLRFHR 120 (217)
T ss_pred c---CCCCEEEEECCeecCcCHHH-HHHHHH
Confidence 2 57889999999998887554 445444
No 100
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=91.10 E-value=5.7 Score=35.10 Aligned_cols=102 Identities=17% Similarity=0.092 Sum_probs=59.6
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.++..+++.... + |+|+-....+....+ .+.. ....++.++.. .....| ...++..|+++....
T Consensus 24 ~g~~ll~~~i~~~~~~~~~--~--i~vv~~~~~~~~~~~-~~~~--~~~~~~~~~~~-~~~~~G-~~~si~~gl~~~~~~ 94 (190)
T TIGR03202 24 GETTLGSASLKTALSSRLS--K--VIVVIGEKYAHLSWL-DPYL--LADERIMLVCC-RDACEG-QAHSLKCGLRKAEAM 94 (190)
T ss_pred CCccHHHHHHHHHHhCCCC--c--EEEEeCCccchhhhh-hHhh--hcCCCeEEEEC-CChhhh-HHHHHHHHHHHhccC
Confidence 4566888888776653222 2 444443333222211 1111 01233444433 222234 667888888853223
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhcCCc
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~ 341 (352)
+.|+++++++|. .++++.+++++..++.+++
T Consensus 95 ~~d~vlv~~~D~P~v~~~~i~~L~~~~~~~~~ 126 (190)
T TIGR03202 95 GADAVVILLADQPFLTADVINALLALAKRRPD 126 (190)
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHhhCCC
Confidence 579999999999 5799999999999875554
No 101
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=90.80 E-value=3.3 Score=37.39 Aligned_cols=97 Identities=12% Similarity=0.123 Sum_probs=60.6
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc-CCCCchHHHHHHHH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI-LRDGYKAGNLKSAM 304 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~-~~~G~Ka~aLn~al 304 (352)
++|..+. ..++..+.++.+..... |+|+-....+...+.+. . ...++++.+.... ...| -++++..++
T Consensus 24 llpi~g~-~li~~~l~~l~~~gi~~----i~iv~~~~~~~i~~~~~----~-~~~~~~i~~~~~~~~~~g-~~~~l~~~~ 92 (221)
T cd06422 24 LVPVAGK-PLIDHALDRLAAAGIRR----IVVNTHHLADQIEAHLG----D-SRFGLRITISDEPDELLE-TGGGIKKAL 92 (221)
T ss_pred eeeECCE-EHHHHHHHHHHHCCCCE----EEEEccCCHHHHHHHHh----c-ccCCceEEEecCCCcccc-cHHHHHHHH
Confidence 3555565 79999999999876443 44443433343333332 1 1235666665443 2344 678898888
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f 336 (352)
... +.+.++++.+|.+...++...+..+-
T Consensus 93 ~~~---~~~~~lv~~~D~i~~~~~~~~~~~~~ 121 (221)
T cd06422 93 PLL---GDEPFLVVNGDILWDGDLAPLLLLHA 121 (221)
T ss_pred Hhc---CCCCEEEEeCCeeeCCCHHHHHHHHH
Confidence 862 33779999999999888776554443
No 102
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=90.65 E-value=3.6 Score=36.68 Aligned_cols=98 Identities=12% Similarity=0.123 Sum_probs=57.9
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..|. ..+..++..+.+.... + |+|+-+..++.+.+.+.. ....+.++.+.......| .++++..++++
T Consensus 24 l~i~g~-pli~~~l~~l~~~g~~--~--v~vv~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~G-~~~~l~~a~~~ 93 (223)
T cd06915 24 APVAGR-PFLEYLLEYLARQGIS--R--IVLSVGYLAEQIEEYFGD----GYRGGIRIYYVIEPEPLG-TGGAIKNALPK 93 (223)
T ss_pred cEECCc-chHHHHHHHHHHCCCC--E--EEEEcccCHHHHHHHHcC----ccccCceEEEEECCCCCc-chHHHHHHHhh
Confidence 444454 6888899988876422 2 444444333343333321 111244544444444455 77888888885
Q ss_pred cCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 307 SYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
.+.+.++++++|...+++ +.+++..+.+
T Consensus 94 ---~~~~~~lv~~~D~~~~~~-~~~~l~~~~~ 121 (223)
T cd06915 94 ---LPEDQFLVLNGDTYFDVD-LLALLAALRA 121 (223)
T ss_pred ---cCCCCEEEEECCcccCCC-HHHHHHHHHh
Confidence 245789999999987666 5567776653
No 103
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=90.50 E-value=0.96 Score=44.17 Aligned_cols=105 Identities=15% Similarity=0.094 Sum_probs=67.3
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc--CCC----
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--LRD---- 293 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~--~~~---- 293 (352)
+-.++-.|-+.||+..++++|.|++..- ++. |+.-.|+ +|.|.+++.++.+++|.. +.+.|.... .+.
T Consensus 86 pl~~~~~iRvKnE~~tl~~si~S~Lpai---~~g-VI~yNdc-~D~t~Eiil~fckkyP~f-ip~~Ypy~v~~~n~~~~~ 159 (347)
T PF06306_consen 86 PLNPWAFIRVKNEAMTLAESIESILPAI---DEG-VIGYNDC-TDGTEEIILEFCKKYPSF-IPIKYPYEVIIKNPKSEE 159 (347)
T ss_pred CCCcceEEEEcchhhhHHHHHHHHHHHH---hcc-EEEeecC-CCCHHHHHHHHHHhCccc-ccccCcchhhccCCchhh
Confidence 4456888999999999999999988631 121 3444455 555578888998888753 333322111 111
Q ss_pred CchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHH
Q 018646 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRT 332 (352)
Q Consensus 294 G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~l 332 (352)
.....=.|.+++. ..+++|++=+|+|.+..+.-|-+.
T Consensus 160 n~l~~YYNy~ls~--ipk~~w~iKID~DhIy~~~KL~ks 196 (347)
T PF06306_consen 160 NSLYNYYNYVLSF--IPKNEWAIKIDADHIYDTKKLYKS 196 (347)
T ss_pred hhhhhhhhhhhcc--cccceEEEEeccceeecHHHHhhh
Confidence 1122223445553 357899999999999998876443
No 104
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=90.26 E-value=0.92 Score=42.80 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=62.2
Q ss_pred EEEEEec-cCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHH
Q 018646 223 VLVQIPM-CNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (352)
Q Consensus 223 VsViIPa-yNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn 301 (352)
.+|+|.+ |+..+.+.+.|..+.+..+= -+|+|+=++..+.... .+++..++.+.++... ...+|
T Consensus 1 fTvvi~t~~~R~~~L~~~l~~l~~~~~l---~~IvVvWn~~~~~P~~------~~~~~~~vpV~~~~~~------~nsLn 65 (247)
T PF09258_consen 1 FTVVINTSYKRSDLLKRLLRHLASSPSL---RKIVVVWNNPNPPPPS------SKWPSTGVPVRVVRSS------RNSLN 65 (247)
T ss_dssp EEEEEEE-SS-HHHHHHHHHHHTTSTTE---EEEEEEEE-TS--THH------HHHT---S-EEEEEES------SHHGG
T ss_pred CEEEEEecccchHHHHHHHHHHHcCCCC---CeEEEEeCCCCCCCcc------cccCCCCceEEEEecC------CccHH
Confidence 3788888 99999999999999776443 2344433322222111 2233445666655322 22233
Q ss_pred HHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCc--EEEE
Q 018646 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKL--IGFF 345 (352)
Q Consensus 302 ~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~--vg~V 345 (352)
.-+.-...-+.+-|+.+|.|..++++-|+..-...+++|+ ||+.
T Consensus 66 nRF~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~W~~~pdrlVGf~ 111 (247)
T PF09258_consen 66 NRFLPDPEIETDAVLSLDDDVMLSCDELEFAFQVWREFPDRLVGFP 111 (247)
T ss_dssp GGGS--TT--SSEEEEEETTEEE-HHHHHHHHHHHCCSTTSEEES-
T ss_pred hcCcCccccCcceEEEecCCcccCHHHHHHHHHHHHhChhheeCCc
Confidence 3222111356899999999999999999999999988887 4443
No 105
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional
Probab=90.25 E-value=4 Score=37.44 Aligned_cols=99 Identities=10% Similarity=0.103 Sum_probs=57.4
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....+..++..+.+...-. ++ ++++++...+...+.+ .++.....++..+ ....+ ....+..|++.. .
T Consensus 28 ~gkpll~~~i~~~~~~~~~~-~i-vVv~~~~~~~~~~~~~----~~~~~~~~~~~~v--~~g~~-r~~sv~~gl~~~--~ 96 (230)
T PRK13385 28 VGEPIFIHALRPFLADNRCS-KI-IIVTQAQERKHVQDLM----KQLNVADQRVEVV--KGGTE-RQESVAAGLDRI--G 96 (230)
T ss_pred CCeEHHHHHHHHHHcCCCCC-EE-EEEeChhhHHHHHHHH----HhcCcCCCceEEc--CCCch-HHHHHHHHHHhc--c
Confidence 45578999999988653222 32 3444332222222222 2221111122222 12233 457888888852 3
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
+.+++++.|+|. .++++.+++++..+..+.
T Consensus 97 ~~d~vli~~~d~P~i~~~~i~~li~~~~~~~ 127 (230)
T PRK13385 97 NEDVILVHDGARPFLTQDIIDRLLEGVAKYG 127 (230)
T ss_pred CCCeEEEccCCCCCCCHHHHHHHHHHHhhCC
Confidence 468999999999 579999999999987543
No 106
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=89.99 E-value=0.66 Score=46.69 Aligned_cols=110 Identities=18% Similarity=0.119 Sum_probs=73.4
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc------CCCC
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI------LRDG 294 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~------~~~G 294 (352)
|.|.+.+-.+|-...+.--+..+-++|||..+.-|++--|.+.|.+.++.+++.+........+.+.... +..|
T Consensus 3 ptvl~alL~rn~ah~lp~Flg~le~~Dypk~r~aiw~~~dh~~d~~ie~freWL~nv~~~y~~V~~e~~~e~~s~~d~~~ 82 (568)
T KOG4179|consen 3 PTVLCALLFRNFAHSLPLFLGELEEGDYPKIRPAIWIGVDHEHDHAIEYFREWLENVGDLYHRVKWEPFIEPKSYPDEHG 82 (568)
T ss_pred ceeehHHHHHHHHhhhhhccCChhccCCcccccceEEecCccccchHHHHHHHHHhcCCccceeEEEecCCccccCcccC
Confidence 5666666777777777777777778999998888888888777777778888877654443344433221 1112
Q ss_pred c--------------hHHHHHHHHhccCCCCccEEEEEcCCCCC-ChHHHHHHHH
Q 018646 295 Y--------------KAGNLKSAMNCSYVKDYEFVAIFDADFQP-NPDFLRRTVP 334 (352)
Q Consensus 295 ~--------------Ka~aLn~al~~~~~a~gd~V~~lDAD~~~-~pd~L~~lv~ 334 (352)
. |-.++|.|=+ .-.||++|.|.|+.+ .+|.|.-++.
T Consensus 83 pk~W~~sr~q~lm~lKeea~~~~r~----~~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 83 PKHWPDSRFQHLMSLKEEALNWARS----GWADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred CccCchHHHHHHHHHHHHHHHHHHh----hhcceeEEeehhheeeCCchHhHHHh
Confidence 1 4445555444 346999999999986 6777766554
No 107
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=89.96 E-value=4.2 Score=41.07 Aligned_cols=106 Identities=13% Similarity=0.094 Sum_probs=61.6
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+. ..++.+++.+.+.... + |+|+-....+...+.+. ..+..+.+.......| .++++..++.
T Consensus 27 ll~v~gk-pli~~~l~~l~~~gi~--~--ivvv~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~G-~~~sl~~a~~ 93 (446)
T PRK14353 27 LHPVAGR-PMLAHVLAAAASLGPS--R--VAVVVGPGAEAVAAAAA-------KIAPDAEIFVQKERLG-TAHAVLAARE 93 (446)
T ss_pred cCEECCc-hHHHHHHHHHHhCCCC--c--EEEEECCCHHHHHHHhh-------ccCCCceEEEcCCCCC-cHHHHHHHHH
Confidence 3455554 6899999999886533 2 33333333333333322 1122222222333344 6777887776
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEE
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
.. ....|.++++++|. .++++.+++++.++..+.+..++
T Consensus 94 ~l-~~~~~~~lv~~~D~P~i~~~~l~~l~~~~~~~~~~~i~ 133 (446)
T PRK14353 94 AL-AGGYGDVLVLYGDTPLITAETLARLRERLADGADVVVL 133 (446)
T ss_pred HH-hccCCCEEEEeCCcccCCHHHHHHHHHhHhcCCcEEEE
Confidence 42 11246688899998 78999999999977654444443
No 108
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=89.20 E-value=8.8 Score=35.31 Aligned_cols=95 Identities=22% Similarity=0.214 Sum_probs=61.4
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc----CCCCchHHHHHHHHhc
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI----LRDGYKAGNLKSAMNC 306 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~----~~~G~Ka~aLn~al~~ 306 (352)
+....+..+++.+++...-. + |+| .++++++.+.++ ..+..+...+.. ...| ....+.+|++.
T Consensus 22 ~GkpLi~~ti~~a~~s~~~d-~--IvV--std~~~i~~~a~-------~~g~~v~~~r~~~l~~d~~~-~~~si~~~l~~ 88 (222)
T TIGR03584 22 CGKPMIAYSIEAALNSGLFD-K--VVV--STDDEEIAEVAK-------SYGASVPFLRPKELADDFTG-TAPVVKHAIEE 88 (222)
T ss_pred CCcCHHHHHHHHHHhCCCCC-E--EEE--eCCCHHHHHHHH-------HcCCEeEEeChHHHcCCCCC-chHHHHHHHHH
Confidence 44568999999998876543 2 333 223345444443 345555432111 1233 66788888875
Q ss_pred cCC-CCccEEEEEcCCCC-CChHHHHHHHHHHhc
Q 018646 307 SYV-KDYEFVAIFDADFQ-PNPDFLRRTVPHFKV 338 (352)
Q Consensus 307 ~~~-a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~ 338 (352)
... .+.|.|+++++|.- ..++.+.+++..|.+
T Consensus 89 l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~ 122 (222)
T TIGR03584 89 LKLQKQYDHACCIYATAPFLQAKILKEAFELLKQ 122 (222)
T ss_pred HhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHh
Confidence 311 34799999999995 699999999999975
No 109
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=89.04 E-value=5.5 Score=40.06 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=63.4
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..++ ..+..+++.+.+.... + ++|+-....+.+.+.++ +.++++. ......| .++++..++.
T Consensus 22 l~~i~gk-pli~~~l~~l~~~g~~--~--iiiv~~~~~~~i~~~~~-------~~~i~~~--~~~~~~G-~~~ai~~a~~ 86 (451)
T TIGR01173 22 LHPLAGK-PMLEHVIDAARALGPQ--K--IHVVYGHGAEQVRKALA-------NRDVNWV--LQAEQLG-TGHAVLQALP 86 (451)
T ss_pred hceeCCc-cHHHHHHHHHHhCCCC--e--EEEEECCCHHHHHHHhc-------CCCcEEE--EcCCCCc-hHHHHHHHHH
Confidence 3454554 6888999999886543 2 33333333333333322 2234433 3333334 7788888887
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEEE
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
.. .+.|.++++++|. ...++.+++++..++++ +..++.
T Consensus 87 ~l--~~~~~~lv~~~D~p~i~~~~~~~l~~~~~~~-~~~~~~ 125 (451)
T TIGR01173 87 FL--PDDGDVLVLYGDVPLISAETLERLLEAHRQN-GITLLT 125 (451)
T ss_pred hc--CCCCcEEEEECCcCCcCHHHHHHHHHHHhhC-CEEEEE
Confidence 52 3347899999998 67899999999988653 444444
No 110
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=88.93 E-value=11 Score=34.51 Aligned_cols=97 Identities=12% Similarity=0.146 Sum_probs=55.7
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..+ ...++.++..+.+.. . ++ |+|+-+ .+.+.+.+. ..++++++.......| ..+ +..++..
T Consensus 22 l~i~G-kpll~~~l~~l~~~~-i-~~--ivvv~~--~~~i~~~~~-------~~~~~v~~~~~~~~~g-t~~-~~~~~~~ 85 (245)
T PRK05450 22 ADIGG-KPMIVRVYERASKAG-A-DR--VVVATD--DERIADAVE-------AFGGEVVMTSPDHPSG-TDR-IAEAAAK 85 (245)
T ss_pred cccCC-cCHHHHHHHHHHhcC-C-Ce--EEEECC--cHHHHHHHH-------HcCCEEEECCCcCCCc-hHH-HHHHHHh
Confidence 44444 468888899888752 2 22 344333 233333222 3456665443333223 333 3334432
Q ss_pred cCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
....+.+.++++++|. .++++.+++++..+..+
T Consensus 86 ~~~~~~~~vlv~~~D~Pli~~~~l~~li~~~~~~ 119 (245)
T PRK05450 86 LGLADDDIVVNVQGDEPLIPPEIIDQVAEPLANP 119 (245)
T ss_pred cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHhcC
Confidence 1012468899999999 78999999999988654
No 111
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase. This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in
Probab=88.65 E-value=7.5 Score=35.33 Aligned_cols=107 Identities=13% Similarity=0.108 Sum_probs=60.3
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+. ..++.++..+.+.... + |+|+-....+...+.++ .....++++.+.......| -++++..|..
T Consensus 25 l~~i~g~-~li~~~l~~l~~~~~~--~--i~vv~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~g-~~~sl~~a~~ 94 (236)
T cd04189 25 LIPVAGK-PIIQYAIEDLREAGIE--D--IGIVVGPTGEEIKEALG----DGSRFGVRITYILQEEPLG-LAHAVLAARD 94 (236)
T ss_pred eeEECCc-chHHHHHHHHHHCCCC--E--EEEEcCCCHHHHHHHhc----chhhcCCeEEEEECCCCCC-hHHHHHHHHH
Confidence 4555555 7899999998876433 2 44443434444443332 2222345555554443345 6788888887
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEE
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
.. .+.++ +++.+|...+.++..-+..+...+.++.++
T Consensus 95 ~i--~~~~~-li~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 131 (236)
T cd04189 95 FL--GDEPF-VVYLGDNLIQEGISPLVRDFLEEDADASIL 131 (236)
T ss_pred hc--CCCCE-EEEECCeecCcCHHHHHHHHHhcCCceEEE
Confidence 52 23454 558899998887665443343433444443
No 112
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase.
Probab=88.29 E-value=10 Score=35.16 Aligned_cols=96 Identities=11% Similarity=0.119 Sum_probs=55.0
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
++..+ ...+..+++.+.+.. -++ |+|+-| ++.+.+.++ ..+++++.. .....|+ ...+..+++.
T Consensus 19 ~~l~G-kPli~~~le~~~~~~--~d~--VvVvt~--~~~i~~~~~-------~~g~~~v~~-~~~~~~G-t~r~~~~~~~ 82 (238)
T TIGR00466 19 EDIFG-KPMIVHVAENANESG--ADR--CIVATD--DESVAQTCQ-------KFGIEVCMT-SKHHNSG-TERLAEVVEK 82 (238)
T ss_pred cccCC-cCHHHHHHHHHHhCC--CCe--EEEEeC--HHHHHHHHH-------HcCCEEEEe-CCCCCCh-hHHHHHHHHH
Confidence 44434 458888888887653 223 344322 233333332 345654432 2233342 3334444432
Q ss_pred cCCCCccEEEEEcCCCC-CChHHHHHHHHHHhc
Q 018646 307 SYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKV 338 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~ 338 (352)
....+.|+|+++|+|.- ++++.+.+++..+.+
T Consensus 83 l~~~~~d~Vli~~gD~Pli~~~~I~~li~~~~~ 115 (238)
T TIGR00466 83 LALKDDERIVNLQGDEPFIPKEIIRQVADNLAT 115 (238)
T ss_pred hCCCCCCEEEEEcCCcCcCCHHHHHHHHHHHhc
Confidence 11135689999999995 799999999999863
No 113
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=87.94 E-value=9 Score=34.94 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=55.7
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
...++.+++.+.+...-. + |+|+-+ ++.+.+.++ ..++++++... ...++.+ .+..++.. .+.
T Consensus 27 kPli~~~i~~l~~~~~~~-~--ivv~t~--~~~i~~~~~-------~~~~~v~~~~~-~~~~g~~-~~~~a~~~---~~~ 89 (238)
T PRK13368 27 KPMIQHVYERAAQAAGVE-E--VYVATD--DQRIEDAVE-------AFGGKVVMTSD-DHLSGTD-RLAEVMLK---IEA 89 (238)
T ss_pred cCHHHHHHHHHHhcCCCC-e--EEEECC--hHHHHHHHH-------HcCCeEEecCc-cCCCccH-HHHHHHHh---CCC
Confidence 458888888888762222 2 344322 234443332 23566554322 2233233 45666664 356
Q ss_pred cEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 313 EFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 313 d~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
|.++++++|. ...++.+.+++..+..++
T Consensus 90 d~~lv~~~D~P~i~~~~i~~l~~~~~~~~ 118 (238)
T PRK13368 90 DIYINVQGDEPMIRPRDIDTLIQPMLDDP 118 (238)
T ss_pred CEEEEEcCCcCcCCHHHHHHHHHHHHHCC
Confidence 8999999999 678999999999886544
No 114
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=87.12 E-value=8.9 Score=33.92 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=55.9
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+.. .. +. |+|+-+.. ... .. ..++.++.-......| ..+++..|++. .
T Consensus 28 ~g~~ll~~~i~~l~~-~~--~~--i~vv~~~~---~~~-~~-------~~~~~~v~~~~~~~~g-~~~~i~~~l~~---~ 87 (193)
T PRK00317 28 NGKPLIQHVIERLAP-QV--DE--IVINANRN---LAR-YA-------AFGLPVIPDSLADFPG-PLAGILAGLKQ---A 87 (193)
T ss_pred CCEEHHHHHHHHHhh-hC--CE--EEEECCCC---hHH-HH-------hcCCcEEeCCCCCCCC-CHHHHHHHHHh---c
Confidence 456788889988872 21 12 44442211 111 11 2344443221111234 56788889884 4
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhcCCc
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~ 341 (352)
+.|+++++++|. .++++.+++++..+.+++.
T Consensus 88 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~ 119 (193)
T PRK00317 88 RTEWVLVVPCDTPFIPPDLVARLAQAAGKDDA 119 (193)
T ss_pred CCCeEEEEcCCcCCCCHHHHHHHHHhhhcCCC
Confidence 679999999999 6799999999998864443
No 115
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=87.07 E-value=8.5 Score=34.49 Aligned_cols=102 Identities=18% Similarity=0.170 Sum_probs=59.1
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|. +....++.+++.+....... + |+|+-+....... +.. ... .....+.... ...+ ...++..|+++
T Consensus 23 ~~i-~Gkpll~~~i~~l~~~~~~~-~--ivVv~~~~~~~~~---~~~-~~~-~~~~~~~~~~--~~~~-~~~si~~al~~ 90 (218)
T cd02516 23 LEL-GGKPVLEHTLEAFLAHPAID-E--IVVVVPPDDIDLA---KEL-AKY-GLSKVVKIVE--GGAT-RQDSVLNGLKA 90 (218)
T ss_pred eEE-CCeEHHHHHHHHHhcCCCCC-E--EEEEeChhHHHHH---HHH-Hhc-ccCCCeEEEC--CchH-HHHHHHHHHHh
Confidence 443 44578999999998754332 3 3333332222211 111 111 1111222221 1223 57788889986
Q ss_pred cCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
....+.++++++++|. .++++.+++++..+.++.
T Consensus 91 ~~~~~~~~vlv~~~D~P~i~~~~i~~li~~~~~~~ 125 (218)
T cd02516 91 LPDADPDIVLIHDAARPFVSPELIDRLIDALKEYG 125 (218)
T ss_pred cccCCCCEEEEccCcCCCCCHHHHHHHHHHHhhCC
Confidence 3113678999999999 479999999999987543
No 116
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=86.78 E-value=12 Score=38.38 Aligned_cols=102 Identities=10% Similarity=0.083 Sum_probs=59.9
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+.+ .++.+++++.+.... ++. +++ ....+...+.++ . ....+.+.......| .++++..|+.
T Consensus 26 llpi~gkp-li~~~l~~l~~~g~~--~ii-vvv-~~~~~~i~~~~~----~---~~~~~~~~~~~~~~G-t~~si~~al~ 92 (482)
T PRK14352 26 LHTLAGRS-MLGHVLHAAAGLAPQ--HLV-VVV-GHDRERVAPAVA----E---LAPEVDIAVQDEQPG-TGHAVQCALE 92 (482)
T ss_pred eceeCCcc-HHHHHHHHHHhcCCC--cEE-EEE-CCCHHHHHHHhh----c---cCCccEEEeCCCCCC-cHHHHHHHHH
Confidence 45655654 999999999876432 232 233 222233332222 1 111222333333334 6788888888
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
+......+.++++++|. .+.++.+++++..++.+.
T Consensus 93 ~l~~~~~~~vlV~~gD~P~~~~~~l~~li~~~~~~~ 128 (482)
T PRK14352 93 ALPADFDGTVVVTAGDVPLLDGETLADLVATHTAEG 128 (482)
T ss_pred HhccCCCCeEEEEeCCeeccCHHHHHHHHHHHHhcC
Confidence 53111247899999999 678999999999876543
No 117
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=86.43 E-value=10 Score=32.89 Aligned_cols=85 Identities=13% Similarity=0.235 Sum_probs=55.0
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+... .. + |+|+-+..... .. ..+++++.- .....| ...++..|+++ .
T Consensus 24 ~g~~ll~~~i~~l~~~-~~--~--iivv~~~~~~~----~~-------~~~~~~v~~-~~~~~G-~~~si~~~l~~---~ 82 (181)
T cd02503 24 GGKPLLEHVLERLKPL-VD--E--VVISANRDQER----YA-------LLGVPVIPD-EPPGKG-PLAGILAALRA---A 82 (181)
T ss_pred CCEEHHHHHHHHHHhh-cC--E--EEEECCCChHH----Hh-------hcCCcEeeC-CCCCCC-CHHHHHHHHHh---c
Confidence 3456888888887764 22 2 44443322221 11 234554422 223345 67889999985 4
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHH
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHF 336 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f 336 (352)
+.+.++++.+|. .++++.++.++..+
T Consensus 83 ~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 83 PADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 579999999999 57999999999988
No 118
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=85.49 E-value=19 Score=37.54 Aligned_cols=121 Identities=12% Similarity=0.236 Sum_probs=73.5
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhh-cCCeEEEeeccCCCCchH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE-AGANIVYRHRILRDGYKA 297 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~-~~v~ii~~~r~~~~G~Ka 297 (352)
..+++.|++-+|-.+ .+++.+..+.+...+ ++++|.=++.+. .+.+++...+.+. ..++++.+ .|.|-=.
T Consensus 263 ~~~kiav~lHv~Y~D-Ll~E~l~~l~~~p~~---~Dl~ITt~~~~~--~~~i~~~l~~~~~~~~~~v~vv---~NrGRDi 333 (498)
T PF05045_consen 263 SKKKIAVHLHVFYPD-LLEEILDYLANIPFP---YDLFITTDSEEK--KEEIEEILAKRPGFKNAEVRVV---ENRGRDI 333 (498)
T ss_pred CCCcEEEEEEEEcHh-hHHHHHHHHHhCCCC---eEEEEECCchhh--HHHHHHHHHhccCCCceEEEEe---CCCCccH
Confidence 357899999999886 777888888776443 566665443322 2334444433332 23455433 4445223
Q ss_pred HHHHHHHhcc-CCCCccEEEEEcCCCCCC--------------------hHHHHHHHHHHhcCCcEEEEEec
Q 018646 298 GNLKSAMNCS-YVKDYEFVAIFDADFQPN--------------------PDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 298 ~aLn~al~~~-~~a~gd~V~~lDAD~~~~--------------------pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
+.+=.++... ...+||+|+.+..--.++ ++.+.+++..|++||++|+|..+
T Consensus 334 ~pfLv~~~~~l~~~~YD~v~~~HtKKS~~~~~~~g~~wr~~l~~~LL~s~~~v~~Il~~F~~~p~lGlv~P~ 405 (498)
T PF05045_consen 334 LPFLVGLKDELLDSKYDYVCHLHTKKSPHNDRSDGDSWRRELLDNLLGSKEYVDNILSAFEDDPRLGLVIPD 405 (498)
T ss_pred HHHHHHHHHHhccCCccEEEEEEcccCcCcCcchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCCceEEeCC
Confidence 3333222211 126899999987644433 35677788899999999999875
No 119
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.
Probab=85.46 E-value=10 Score=34.64 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=58.8
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHh-hhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKW-QEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~-~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
++|..+. ..+..++..+.++.... + ++++ ....+.+.+.+. ++ .+.++++.+.......| -++++..+.
T Consensus 25 llpv~g~-pli~~~l~~l~~~g~~~--v-~iv~-~~~~~~~~~~l~----~~~~~~~~~i~~~~~~~~~G-~~~al~~a~ 94 (233)
T cd06425 25 LVEFCNK-PMIEHQIEALAKAGVKE--I-ILAV-NYRPEDMVPFLK----EYEKKLGIKITFSIETEPLG-TAGPLALAR 94 (233)
T ss_pred cCeECCc-chHHHHHHHHHHCCCcE--E-EEEe-eeCHHHHHHHHh----cccccCCeEEEeccCCCCCc-cHHHHHHHH
Confidence 3455565 69999999999875432 3 2333 322333333332 22 13456666543333344 778888887
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
.+....+.+ ++++.+|.+.+.++ ++++..+.+
T Consensus 95 ~~~~~~~~~-~lv~~~D~~~~~~~-~~~~~~~~~ 126 (233)
T cd06425 95 DLLGDDDEP-FFVLNSDVICDFPL-AELLDFHKK 126 (233)
T ss_pred HHhccCCCC-EEEEeCCEeeCCCH-HHHHHHHHH
Confidence 753111245 57779999887774 777776654
No 120
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule. GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=85.46 E-value=15 Score=33.20 Aligned_cols=109 Identities=15% Similarity=0.091 Sum_probs=60.2
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..+. ..++.+++.+.++... ++ ++|+ . .+......++...... ..++++.+. .....| -++++..|+..
T Consensus 24 l~i~g~-pli~~~l~~l~~~g~~--~i-vvv~-~-~~~~~~~~~~~~~~~~-~~~~~i~~~-~~~~~g-~~~~l~~a~~~ 94 (231)
T cd04183 24 IEVDGK-PMIEWVIESLAKIFDS--RF-IFIC-R-DEHNTKFHLDESLKLL-APNATVVEL-DGETLG-AACTVLLAADL 94 (231)
T ss_pred eEECCE-EHHHHHHHhhhccCCc--eE-EEEE-C-hHHhhhhhHHHHHHHh-CCCCEEEEe-CCCCCc-HHHHHHHHHhh
Confidence 566665 6999999999887522 23 2333 2 1121112222222111 234565443 233445 78888888875
Q ss_pred cCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 018646 307 SYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
. .+.+.++++.+|.+...++...+..+...+.+..++.
T Consensus 95 l--~~~~~~lv~~~D~i~~~~~~~~~~~~~~~~~~~~i~~ 132 (231)
T cd04183 95 I--DNDDPLLIFNCDQIVESDLLAFLAAFRERDLDGGVLT 132 (231)
T ss_pred c--CCCCCEEEEecceeeccCHHHHHHHhhccCCceEEEE
Confidence 2 2346778899999988887655544434333444443
No 121
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=85.36 E-value=0.46 Score=46.50 Aligned_cols=109 Identities=10% Similarity=0.086 Sum_probs=60.2
Q ss_pred CeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHH-HHhhhcCCeEEEeeccCCCCchHH
Q 018646 221 PMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEV-LKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 221 P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~-~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|+||+-+.. ...-+.-+.+.+ .+.+|||-|++-.+...+-+-+- +-|.+.++. .....+....+|..
T Consensus 8 ~~~divi~~~~~~l~~~~~~wr~~~~------~~hliiv~d~~~~~~~~~p~g~~~~~y~~~di~-~~lg~~~~i~~~~~ 80 (348)
T PF03214_consen 8 DEVDIVIPALRPNLTDFLEEWRPFFS------PYHLIIVQDPDPNEEIKVPEGFDYEVYNRNDIE-RVLGAKTLIPFKGD 80 (348)
T ss_pred CcccEEeecccccHHHHHHHHHHhhc------ceeEEEEeCCCccccccCCcccceeeecHhhHH-hhcCCccccccccc
Confidence 3589999998754 244444555543 26678888876554332221110 000011111 01111122334555
Q ss_pred HHHH-HHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC
Q 018646 299 NLKS-AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 299 aLn~-al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d 339 (352)
|..+ |+- .++.+|++++|.|+.|..|.....+..+.++
T Consensus 81 a~R~fGyL---~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh 119 (348)
T PF03214_consen 81 ACRNFGYL---VSKKDYIVSIDDDCLPAKDDFGTHIDAVAQH 119 (348)
T ss_pred chhhhHhh---hcccceEEEEccccccccCCccceehhhhcc
Confidence 5433 555 3577999999999999888777777777654
No 122
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide. CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.
Probab=84.91 E-value=22 Score=32.38 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=56.7
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+ ...++.+++.+.+..-.. + |+|+-+ .+.+.+.+ . ..++.+++.......| .+ .+..++.
T Consensus 20 l~~i~g-kpll~~~l~~l~~~~~i~-~--ivvv~~--~~~i~~~~----~---~~~~~~~~~~~~~~~g-t~-~~~~~~~ 84 (239)
T cd02517 20 LADIAG-KPMIQHVYERAKKAKGLD-E--VVVATD--DERIADAV----E---SFGGKVVMTSPDHPSG-TD-RIAEVAE 84 (239)
T ss_pred CcccCC-cCHHHHHHHHHHhCCCCC-E--EEEECC--cHHHHHHH----H---HcCCEEEEcCcccCch-hH-HHHHHHH
Confidence 344444 568888899888762222 2 344322 23333222 2 2356665443222223 44 3555665
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
.. ..+.|.++++++|. .+.++.+.+++..+..+
T Consensus 85 ~~-~~~~d~vlv~~gD~Pli~~~~l~~l~~~~~~~ 118 (239)
T cd02517 85 KL-DADDDIVVNVQGDEPLIPPEMIDQVVAALKDD 118 (239)
T ss_pred hc-CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhC
Confidence 31 12248899999999 78999999999988755
No 123
>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC. Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis.
Probab=84.89 E-value=16 Score=32.37 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCcc
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd 313 (352)
..++.++..+..... ++ ++|+.+. +...+... ..++.++ ... ..| ....+..|+++. ..+++
T Consensus 31 ~ll~~~l~~l~~~~~--~~--vvvv~~~--~~~~~~~~-------~~~v~~i--~~~-~~G-~~~si~~al~~~-~~~~~ 92 (195)
T TIGR03552 31 AMLRDVITALRGAGA--GA--VLVVSPD--PALLEAAR-------NLGAPVL--RDP-GPG-LNNALNAALAEA-REPGG 92 (195)
T ss_pred HHHHHHHHHHHhcCC--CC--EEEECCC--HHHHHHHH-------hcCCEEE--ecC-CCC-HHHHHHHHHHHh-hccCC
Confidence 466667777665432 22 4455442 33322221 3455544 222 234 788888888853 23457
Q ss_pred EEEEEcCCCC-CChHHHHHHHHHHhc
Q 018646 314 FVAIFDADFQ-PNPDFLRRTVPHFKV 338 (352)
Q Consensus 314 ~V~~lDAD~~-~~pd~L~~lv~~f~~ 338 (352)
.++++-+|.- +.++.+++++..++.
T Consensus 93 ~vlv~~~D~P~l~~~~i~~l~~~~~~ 118 (195)
T TIGR03552 93 AVLILMADLPLLTPRELKRLLAAATE 118 (195)
T ss_pred eEEEEeCCCCCCCHHHHHHHHHhccc
Confidence 9999999995 799999999998864
No 124
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=83.70 E-value=13 Score=32.39 Aligned_cols=90 Identities=11% Similarity=0.128 Sum_probs=56.1
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....+..+++.+... .++ |+|+-+... . .... ...+++++........| ..+++..|+++ .
T Consensus 25 ~g~pll~~~l~~l~~~---~~~--ivv~~~~~~-~--~~~~------~~~~~~~i~~~~~~~~g-~~~si~~al~~---~ 86 (186)
T TIGR02665 25 GGKPLIEHVLARLRPQ---VSD--LAISANRNP-E--RYAQ------AGFGLPVVPDALADFPG-PLAGILAGLRW---A 86 (186)
T ss_pred CCEEHHHHHHHHHHhh---CCE--EEEEcCCCH-H--HHhh------ccCCCcEEecCCCCCCC-CHHHHHHHHHh---c
Confidence 3456888888887642 222 444433221 1 1111 02244544221123345 77889999985 3
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhc
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKV 338 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~ 338 (352)
+.|+++++++|. .+.++.+++++..+..
T Consensus 87 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 115 (186)
T TIGR02665 87 GTDWVLTVPCDTPFLPEDLVARLAAALEA 115 (186)
T ss_pred CCCeEEEEecCCCcCCHHHHHHHHHHhhc
Confidence 568999999999 6899999999999874
No 125
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=83.07 E-value=12 Score=33.54 Aligned_cols=105 Identities=12% Similarity=0.095 Sum_probs=57.8
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..|. ..++.++..+.+..... + +|+-+...+... +...+....++++.+.......| -++++..+.+
T Consensus 24 l~~~g~-pli~~~l~~l~~~~~~~--i--ivv~~~~~~~i~----~~~~~~~~~~~~i~~~~~~~~~g-~~~~l~~~~~- 92 (220)
T cd06426 24 LKVGGK-PILETIIDRFIAQGFRN--F--YISVNYLAEMIE----DYFGDGSKFGVNISYVREDKPLG-TAGALSLLPE- 92 (220)
T ss_pred CeECCc-chHHHHHHHHHHCCCcE--E--EEECccCHHHHH----HHHCCccccCccEEEEECCCCCc-chHHHHHHHh-
Confidence 555665 59999999998864442 3 333332222222 22221112345555554333334 4666655544
Q ss_pred cCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC-CcEEEEE
Q 018646 307 SYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT-KLIGFFL 346 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d-p~vg~Vq 346 (352)
...+.++++.+|.+...+ +.+++..+.+. .++.++.
T Consensus 93 ---~~~~~~lv~~~D~i~~~~-~~~l~~~~~~~~~~~~~~~ 129 (220)
T cd06426 93 ---KPTDPFLVMNGDILTNLN-YEHLLDFHKENNADATVCV 129 (220)
T ss_pred ---hCCCCEEEEcCCEeeccC-HHHHHHHHHhcCCCEEEEE
Confidence 225778888999877654 56777777643 3444443
No 126
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=82.17 E-value=8.7 Score=35.05 Aligned_cols=106 Identities=18% Similarity=0.223 Sum_probs=64.4
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..|....+..+|..+.+...- ++ |+|+-....+... +........++++.++..+...| -++++..+...
T Consensus 25 l~i~g~~pli~~~l~~l~~~g~~--~i-i~V~~~~~~~~i~----~~~~~~~~~~~~i~~i~~~~~~G-ta~al~~a~~~ 96 (248)
T PF00483_consen 25 LPIGGKYPLIDYVLENLANAGIK--EI-IVVVNGYKEEQIE----EHLGSGYKFGVKIEYIVQPEPLG-TAGALLQALDF 96 (248)
T ss_dssp SEETTEEEHHHHHHHHHHHTTCS--EE-EEEEETTTHHHHH----HHHTTSGGGTEEEEEEEESSSSC-HHHHHHHTHHH
T ss_pred ceecCCCcchhhhhhhhcccCCc--eE-EEEEeeccccccc----ccccccccccccceeeecccccc-hhHHHHHHHHH
Confidence 56667757999999999985433 33 3444333333333 33333333455666665555556 89999998876
Q ss_pred cCCCC-ccEEEEEcCCCCCChHHHHHHHHHHhcCCc
Q 018646 307 SYVKD-YEFVAIFDADFQPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 307 ~~~a~-gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~ 341 (352)
..... .+.++++.+|+..+.+ +..++..+.+...
T Consensus 97 i~~~~~~~~~lv~~gD~i~~~~-~~~~l~~~~~~~~ 131 (248)
T PF00483_consen 97 IEEEDDDEDFLVLNGDIIFDDD-LQDMLEFHRESNA 131 (248)
T ss_dssp HTTSEE-SEEEEETTEEEESTT-HHHHHHHHHHHSS
T ss_pred hhhccccceEEEEeccccccch-hhhHHHhhhcccc
Confidence 31111 3469999999998884 4566665554333
No 127
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase. N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre
Probab=82.16 E-value=19 Score=33.33 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=63.4
Q ss_pred EEeccCCchhHHHHHHHHHcC-CCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNL-DWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~q-dyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
++|..+. ..++..|.++.+. ... + |+|+-....+...+.+... ....++.+.+.......| -++++..+.
T Consensus 25 llpv~g~-plI~~~l~~l~~~~gi~--~--i~iv~~~~~~~i~~~l~~~---~~~~~~~i~~~~~~~~~G-t~~al~~a~ 95 (257)
T cd06428 25 LFPVAGK-PMIHHHIEACAKVPDLK--E--VLLIGFYPESVFSDFISDA---QQEFNVPIRYLQEYKPLG-TAGGLYHFR 95 (257)
T ss_pred cCeECCe-eHHHHHHHHHHhcCCCc--E--EEEEecCCHHHHHHHHHhc---ccccCceEEEecCCccCC-cHHHHHHHH
Confidence 4666776 7999999999874 433 2 3444333333333333211 112355666554444445 677877776
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCC-cEEEEE
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTK-LIGFFL 346 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp-~vg~Vq 346 (352)
......+.+.++++.+|.....+ +..++..++++. ++.++.
T Consensus 96 ~~l~~~~~~~~lv~~gD~~~~~d-l~~~~~~h~~~~~~~tl~~ 137 (257)
T cd06428 96 DQILAGNPSAFFVLNADVCCDFP-LQELLEFHKKHGASGTILG 137 (257)
T ss_pred HHhhccCCCCEEEEcCCeecCCC-HHHHHHHHHHcCCCEEEEE
Confidence 54211234678889999987665 777777665432 344443
No 128
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=81.91 E-value=22 Score=36.12 Aligned_cols=99 Identities=12% Similarity=0.110 Sum_probs=60.0
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+. ..++.++.++.+.... ++ ++++-+ ..+...+.+. + +..+.+.......| .++++..++.
T Consensus 25 l~pi~g~-pli~~~l~~l~~~gi~--~i-iiv~~~-~~~~i~~~~~-------~-~~~i~~~~~~~~~G-t~~al~~a~~ 90 (459)
T PRK14355 25 MHPLAGR-PMVSWPVAAAREAGAG--RI-VLVVGH-QAEKVREHFA-------G-DGDVSFALQEEQLG-TGHAVACAAP 90 (459)
T ss_pred eceeCCc-cHHHHHHHHHHhcCCC--eE-EEEECC-CHHHHHHHhc-------c-CCceEEEecCCCCC-HHHHHHHHHH
Confidence 4565565 6888899998876433 23 233332 2233322221 1 11344443344345 7788888887
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
.. ....|.++++++|. ...+..+++++..+...
T Consensus 91 ~l-~~~~~~vlv~~gD~p~~~~~~i~~l~~~~~~~ 124 (459)
T PRK14355 91 AL-DGFSGTVLILCGDVPLLRAETLQGMLAAHRAT 124 (459)
T ss_pred Hh-hccCCcEEEEECCccCcCHHHHHHHHHHHHhc
Confidence 52 12247899999999 67899999999988643
No 129
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=81.83 E-value=9.2 Score=34.68 Aligned_cols=93 Identities=15% Similarity=0.234 Sum_probs=55.6
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+. ..++.++.++.+.... + |+|+-....+...+.++ .. .++.+++.......| .++++..++.
T Consensus 23 l~~~~g~-~li~~~l~~l~~~gi~--~--i~vv~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~g-~~~s~~~~~~ 90 (229)
T cd02523 23 LLEINGK-PLLERQIETLKEAGID--D--IVIVTGYKKEQIEELLK----KY--PNIKFVYNPDYAETN-NIYSLYLARD 90 (229)
T ss_pred eeeECCE-EHHHHHHHHHHHCCCc--e--EEEEeccCHHHHHHHHh----cc--CCeEEEeCcchhhhC-cHHHHHHHHH
Confidence 3444444 7999999999886443 2 33333333333332221 11 345555332222344 6788888888
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHH
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVP 334 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~ 334 (352)
+. .+.++++.+|....++.++.+..
T Consensus 91 ~~----~~~~lv~~~D~~~~~~~~~~~~~ 115 (229)
T cd02523 91 FL----DEDFLLLEGDVVFDPSILERLLS 115 (229)
T ss_pred Hc----CCCEEEEeCCEecCHHHHHHHHc
Confidence 62 46789999999998887776553
No 130
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=81.77 E-value=12 Score=35.58 Aligned_cols=23 Identities=35% Similarity=0.547 Sum_probs=17.9
Q ss_pred CCCccEEEEEcCCCCC--ChHHHHH
Q 018646 309 VKDYEFVAIFDADFQP--NPDFLRR 331 (352)
Q Consensus 309 ~a~gd~V~~lDAD~~~--~pd~L~~ 331 (352)
.+.-+=|+++|+|+++ +|+.+-+
T Consensus 88 ~ssFeevllLDaD~vpl~~p~~lF~ 112 (271)
T PF11051_consen 88 FSSFEEVLLLDADNVPLVDPEKLFE 112 (271)
T ss_pred hCCcceEEEEcCCcccccCHHHHhc
Confidence 3678889999999987 6665544
No 131
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional
Probab=80.98 E-value=22 Score=34.26 Aligned_cols=99 Identities=12% Similarity=0.103 Sum_probs=59.4
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeC-CCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDD-ssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
++|.++. ..+.-.|..+.+..-. +|+|+-. ...+.. +++..+..+.++++.+...+...| -++++..|.
T Consensus 28 Llpv~gk-PmI~~~l~~l~~aGi~----~I~ii~~~~~~~~~----~~~l~~g~~~g~~i~y~~q~~~~G-ta~Al~~a~ 97 (292)
T PRK15480 28 LLPIYDK-PMIYYPLSTLMLAGIR----DILIISTPQDTPRF----QQLLGDGSQWGLNLQYKVQPSPDG-LAQAFIIGE 97 (292)
T ss_pred EeEECCE-EHHHHHHHHHHHCCCC----EEEEEecCCchHHH----HHHHcCccccCceeEEEECCCCCC-HHHHHHHHH
Confidence 5788887 6888899998876432 2443322 222222 333322234566777776655555 899988887
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
... .+.++++++ +|++....-+.+++..+.
T Consensus 98 ~~i--~~~~~~lv~-gD~i~~~~~l~~ll~~~~ 127 (292)
T PRK15480 98 EFI--GGDDCALVL-GDNIFYGHDLPKLMEAAV 127 (292)
T ss_pred HHh--CCCCEEEEE-CCeeeeccCHHHHHHHHH
Confidence 752 344666665 676554444677777654
No 132
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=80.97 E-value=16 Score=36.61 Aligned_cols=108 Identities=11% Similarity=0.178 Sum_probs=68.9
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEe-CCCChhHH--HHHHHHHHHhhhcCCeEEEeeccCCCCc
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLD-DSDDPTAQ--TLIKEEVLKWQEAGANIVYRHRILRDGY 295 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvD-Dssdd~t~--~li~~~~~~~~~~~v~ii~~~r~~~~G~ 295 (352)
+.|.+.+++|...+.........++|... ++++.++|+- ..|+++-. +.+..+..++ .++..+ .....=.
T Consensus 227 ~~pgih~i~pl~gr~~~f~rf~q~~c~~~--d~~l~l~vv~f~~se~e~ak~e~~tslra~f----~~~q~l-~lngeFS 299 (494)
T KOG3588|consen 227 EDPGIHMIMPLRGRAAIFARFAQSICARG--DDRLALSVVYFGYSEDEMAKRETITSLRASF----IPVQFL-GLNGEFS 299 (494)
T ss_pred cCCCceEEEeccchHHHhhhhhHHHhccC--CCceEEEEEEecCCChHHHhhhHHHHHhhcC----CceEEe-cccchhh
Confidence 46789999999999999999999888753 4456665444 33443322 2222233222 233322 2222223
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHH
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPH 335 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~ 335 (352)
++.|+..|.++. ...-.+.|+|-|.....+||+++-.-
T Consensus 300 Ra~aL~vGAe~~--~~nvLLFfcDVDi~FT~efL~rcr~N 337 (494)
T KOG3588|consen 300 RAKALMVGAETL--NANVLLFFCDVDIYFTTEFLNRCRLN 337 (494)
T ss_pred hhHHHHhhHHHh--ccceeEEEeccceeehHHHHHHHhhc
Confidence 667788887762 24567788999999999999987543
No 133
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.
Probab=80.68 E-value=31 Score=31.36 Aligned_cols=96 Identities=11% Similarity=0.197 Sum_probs=54.5
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCC--hhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDD--PTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssd--d~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
+.+. +....++.++..+.+..... . |+|+-+.+. +...+.+. ..++.++ ..+. .+.-. ....+
T Consensus 18 ll~l-~Gkpli~~~i~~l~~~~~~~-~--ivVv~~~~~~~~~i~~~~~-------~~~v~~v--~~~~-~~~l~-~~~~~ 82 (233)
T cd02518 18 LKPL-GGKPLLEHLLDRLKRSKLID-E--IVIATSTNEEDDPLEALAK-------KLGVKVF--RGSE-EDVLG-RYYQA 82 (233)
T ss_pred cccc-CCccHHHHHHHHHHhCCCCC-e--EEEECCCCcccHHHHHHHH-------HcCCeEE--ECCc-hhHHH-HHHHH
Confidence 3443 44568889999888754222 2 344433322 33333322 3345543 2222 12111 22234
Q ss_pred HhccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 304 MNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 304 l~~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
++ ..+.|+++++++|. .++++.+++++..+..+
T Consensus 83 ~~---~~~~d~vli~~~D~P~i~~~~i~~li~~~~~~ 116 (233)
T cd02518 83 AE---EYNADVVVRITGDCPLIDPEIIDAVIRLFLKS 116 (233)
T ss_pred HH---HcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhC
Confidence 43 24578999999999 57999999999988753
No 134
>PF02348 CTP_transf_3: Cytidylyltransferase; InterPro: IPR003329 Synonym(s): CMP-N-acetylneuraminic acid synthetase Acylneuraminate cytidylyltransferase (2.7.7.43 from EC) (CMP-NeuAc synthetase) catalyzes the reaction of CTP and NeuAc to form CMP-NeuAc, which is the nucleotide sugar donor used by sialyltransferases []. The outer membrane lipooligosaccharides of some microorganisms contain terminal sialic acid attached to N-acetyllactosamine and so this modification may be important in pathogenesis.; GO: 0009103 lipopolysaccharide biosynthetic process; PDB: 3K8D_C 1VH1_B 3K8E_C 1QWJ_A 3EWI_A 1VIC_B 3DUV_A 1VH3_C 3TQD_A 2Y6P_C ....
Probab=80.25 E-value=29 Score=30.97 Aligned_cols=95 Identities=17% Similarity=0.262 Sum_probs=58.5
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
...+.-+++.+++..+.. + |+| ..++++..+.++ ..++.+..... .-.. -......++.+....+.
T Consensus 24 kpLi~~~i~~a~~s~~~d-~--IvV--aTd~~~i~~~~~-------~~g~~v~~~~~-~~~~-~~~r~~~~~~~~~~~~~ 89 (217)
T PF02348_consen 24 KPLIEYVIERAKQSKLID-E--IVV--ATDDEEIDDIAE-------EYGAKVIFRRG-SLAD-DTDRFIEAIKHFLADDE 89 (217)
T ss_dssp EEHHHHHHHHHHHTTTTS-E--EEE--EESSHHHHHHHH-------HTTSEEEE--T-TSSS-HHHHHHHHHHHHTCSTT
T ss_pred ccHHHHHHHHHHhCCCCC-e--EEE--eCCCHHHHHHHH-------HcCCeeEEcCh-hhcC-CcccHHHHHHHhhhhHH
Confidence 468999999999877665 3 343 344556655665 44566654433 2222 23333344443212245
Q ss_pred cEEEEEcCCCC-CChHHHHHHHHHHhcCCc
Q 018646 313 EFVAIFDADFQ-PNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 313 d~V~~lDAD~~-~~pd~L~~lv~~f~~dp~ 341 (352)
++++.+.+|+- .+|..+.+++..+.++..
T Consensus 90 ~~vv~~~~d~Pll~~~~i~~~i~~~~~~~~ 119 (217)
T PF02348_consen 90 DIVVRLQGDSPLLDPTSIDRAIEDIREANE 119 (217)
T ss_dssp SEEEEESTTETT--HHHHHHHHHHHHHSTT
T ss_pred hhccccCCeeeECCHHHHHHHHHHHhcCch
Confidence 69999999995 699999999999987654
No 135
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=80.18 E-value=18 Score=34.86 Aligned_cols=107 Identities=10% Similarity=0.108 Sum_probs=54.5
Q ss_pred CeEEEEEeccCCc--h-hHHHHHH--HHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCc
Q 018646 221 PMVLVQIPMCNEK--E-VYQQSIA--AVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (352)
Q Consensus 221 P~VsViIPayNE~--~-vl~~tL~--sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~ 295 (352)
|..+++||.--.. . .-.+.+. ++..---|.+-.+|+++|.++--. ..++.+. +...++.|+.-......
T Consensus 2 ~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d--~~i~~~i----~~~~~~~yl~~~s~~~F 75 (346)
T COG4092 2 QPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMD--RLIRSYI----DPMPRVLYLDFGSPEPF 75 (346)
T ss_pred CCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhHH--HHHHHHh----ccccceEEEecCCCccc
Confidence 4567788875432 1 2222233 222211244557888888765222 2334443 33345555543222110
Q ss_pred --hHHHHHHHHhcc-CCCCccEEEEEcCCCCCChHHHHHHH
Q 018646 296 --KAGNLKSAMNCS-YVKDYEFVAIFDADFQPNPDFLRRTV 333 (352)
Q Consensus 296 --Ka~aLn~al~~~-~~a~gd~V~~lDAD~~~~pd~L~~lv 333 (352)
-+.--|.|..++ ...+.++|+|+|.|+....|-..+++
T Consensus 76 ~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l 116 (346)
T COG4092 76 ASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKML 116 (346)
T ss_pred cchhhhhhccchhhhccccccEEEEEeccccccHHHHHHHH
Confidence 111223344432 23568999999999999866555555
No 136
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed
Probab=79.74 E-value=34 Score=30.95 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=56.8
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....+..+++.+.+..... + |+|+-+..+ ...+.+.... ....+.... ...+ ...++..|++.. .
T Consensus 29 ~g~pli~~~l~~l~~~~~~~-~--ivvv~~~~~--~~~~~~~~~~----~~~~~~~~~--~~~~-~~~sv~~~l~~~--~ 94 (227)
T PRK00155 29 GGKPILEHTLEAFLAHPRID-E--IIVVVPPDD--RPDFAELLLA----KDPKVTVVA--GGAE-RQDSVLNGLQAL--P 94 (227)
T ss_pred CCEEHHHHHHHHHHcCCCCC-E--EEEEeChHH--HHHHHHHhhc----cCCceEEeC--Ccch-HHHHHHHHHHhC--C
Confidence 44568899999988753332 3 333333222 1222221111 111222221 2223 677888888852 3
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
+.|+++++|+|. .++++.+++++..+.++.
T Consensus 95 ~~d~vlv~~~D~P~i~~~~i~~li~~~~~~~ 125 (227)
T PRK00155 95 DDDWVLVHDAARPFLTPDDIDRLIEAAEETG 125 (227)
T ss_pred CCCEEEEccCccCCCCHHHHHHHHHHHhhCC
Confidence 578999999998 579999999999887543
No 137
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=79.16 E-value=27 Score=35.24 Aligned_cols=103 Identities=11% Similarity=0.080 Sum_probs=59.0
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..+ ...++.+++.+.... .++ |+|+-....+...+.. ...+++++ ......| -++++..+++.
T Consensus 28 ~~i~g-kpli~~~l~~l~~~~--~~~--iivv~~~~~~~i~~~~-------~~~~~~~v--~~~~~~G-t~~al~~a~~~ 92 (456)
T PRK14356 28 QTLLG-EPMLRFVYRALRPLF--GDN--VWTVVGHRADMVRAAF-------PDEDARFV--LQEQQLG-TGHALQCAWPS 92 (456)
T ss_pred cccCC-CcHHHHHHHHHHhcC--CCc--EEEEECCCHHHHHHhc-------cccCceEE--EcCCCCC-cHHHHHHHHHH
Confidence 44444 458888888887653 222 3333232223222211 12334443 3333334 56778777764
Q ss_pred cCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEE
Q 018646 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
....+.|.++++++|. .++++.++.++.... ..++.++
T Consensus 93 l~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~-~~~~~l~ 131 (456)
T PRK14356 93 LTAAGLDRVLVVNGDTPLVTTDTIDDFLKEAA-GADLAFM 131 (456)
T ss_pred HhhcCCCcEEEEeCCcccCCHHHHHHHHHHHh-cCCEEEE
Confidence 3123468999999999 678999999998776 3444433
No 138
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=79.12 E-value=3.5 Score=38.69 Aligned_cols=100 Identities=16% Similarity=0.119 Sum_probs=57.3
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
.+.+.++|++|.+..-. +++||-.+-.. ++++++..+++- ..++++.++...++ -...+-.|..+ .++
T Consensus 31 r~ii~~~i~~L~~~gi~----e~vvV~~g~~~---~lve~~l~~~~~-~~~iv~N~~y~ktN-~~~Sl~~akd~---~~~ 98 (239)
T COG1213 31 REIIYRTIENLAKAGIT----EFVVVTNGYRA---DLVEEFLKKYPF-NAKIVINSDYEKTN-TGYSLLLAKDY---MDG 98 (239)
T ss_pred eEeHHHHHHHHHHcCCc----eEEEEeccchH---HHHHHHHhcCCc-ceEEEeCCCcccCC-ceeEEeeehhh---hcC
Confidence 35899999999987433 34555543322 244555555542 34444332222221 11123335553 344
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEe
Q 018646 313 EFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 313 d~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
+ ++++|+|++.+|.++++++..= .+.+++...
T Consensus 99 ~-fii~~sD~vye~~~~e~l~~a~--~~~li~d~~ 130 (239)
T COG1213 99 R-FILVMSDHVYEPSILERLLEAP--GEGLIVDRR 130 (239)
T ss_pred c-EEEEeCCEeecHHHHHHHHhCc--CCcEEEecc
Confidence 4 8899999999999999998854 245554443
No 139
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=78.71 E-value=17 Score=36.07 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=69.1
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|.-|.+ .++-.|.++.++..- +++++-..-.+ .++++..+....++++.|.......| -++++..+..+
T Consensus 27 lpI~gkP-ii~~~l~~L~~~Gv~----eivi~~~y~~~----~i~~~~~d~~~~~~~I~y~~e~~~lG-Tag~l~~a~~~ 96 (358)
T COG1208 27 LPIAGKP-LIEYVLEALAAAGVE----EIVLVVGYLGE----QIEEYFGDGEGLGVRITYVVEKEPLG-TAGALKNALDL 96 (358)
T ss_pred ceeCCcc-HHHHHHHHHHHCCCc----EEEEEeccchH----HHHHHHhcccccCCceEEEecCCcCc-cHHHHHHHHHh
Confidence 5666665 888899999886543 35555333333 33333333234467888877666667 89999999996
Q ss_pred cCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC
Q 018646 307 SYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d 339 (352)
. ..+-++++.+|...+-| +..++...+.+
T Consensus 97 l---~~~~f~v~~GDv~~~~d-l~~l~~~~~~~ 125 (358)
T COG1208 97 L---GGDDFLVLNGDVLTDLD-LSELLEFHKKK 125 (358)
T ss_pred c---CCCcEEEEECCeeeccC-HHHHHHHHHhc
Confidence 2 33888999999999999 99999888765
No 140
>TIGR00454 conserved hypothetical protein TIGR00454. At this time this gene appears to be present only in Archea
Probab=78.62 E-value=44 Score=29.75 Aligned_cols=95 Identities=12% Similarity=0.179 Sum_probs=59.2
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|.. ....+..+++.+.+... +. |+|+-+..++.++..++ .....+ ....+.| -...+..|+++
T Consensus 22 l~i~-GkplI~~vi~~l~~~~i--~~--I~Vv~~~~~~~~~~~l~-------~~~~~~---~~~~g~G-~~~~l~~al~~ 85 (183)
T TIGR00454 22 IEVC-GRCLIDHVLSPLLKSKV--NN--IIIATSPHTPKTEEYIN-------SAYKDY---KNASGKG-YIEDLNECIGE 85 (183)
T ss_pred eEEC-CEEHHHHHHHHHHhCCC--CE--EEEEeCCCHHHHHHHHh-------hcCcEE---EecCCCC-HHHHHHHHhhc
Confidence 3434 45688888888876542 23 34443434445544443 222222 2244445 66788889884
Q ss_pred cCCCCccEEEEEcCCCC-CChHHHHHHHHHHhcC
Q 018646 307 SYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKVT 339 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~d 339 (352)
. ...+.++++-+|.- +.++.+..++..+...
T Consensus 86 ~--~~~~~~lv~~~D~P~i~~~~i~~li~~~~~~ 117 (183)
T TIGR00454 86 L--YFSEPFLVVSSDLINLRSKIIDSIVDYYYCI 117 (183)
T ss_pred c--cCCCCEEEEeCCcCcCCHHHHHHHHHHHHhc
Confidence 2 23577999999995 6999999999988543
No 141
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=78.02 E-value=15 Score=34.29 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=64.0
Q ss_pred EEEEE-eccC-Cch--hHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEee-c--------
Q 018646 223 VLVQI-PMCN-EKE--VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRH-R-------- 289 (352)
Q Consensus 223 VsViI-PayN-E~~--vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~-r-------- 289 (352)
++|+| |.|. |++ .+.+-|..-..+. .++ +++-|.+.++.+.++++.+.+. ..++++... +
T Consensus 3 ~~vCv~pl~~~~~~~~~l~e~ie~~~~~G--~~~--~~~Y~~~~~~~~~~vL~~Y~~~---g~v~~~~w~~~~~~~~~~~ 75 (285)
T PF01697_consen 3 FVVCVSPLFGNEDDWLQLIEWIEYHRLLG--VDH--FYFYDNSSSPSVRKVLKEYERS---GYVEVIPWPLRPKFPDFPS 75 (285)
T ss_pred EEEEccchhcccccHHHHHHHHHHHHHhC--CCE--EEEEEccCCHHHHHhHHHHhhc---CeEEEEEcccccccCCccc
Confidence 45555 5555 643 7888888777763 334 4566677888888888765432 223443331 0
Q ss_pred ---cCCC----CchHHHHHHHHhccCCCCccEEEEEcCCCCCChHH----HHHHHHHHhcCC
Q 018646 290 ---ILRD----GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDF----LRRTVPHFKVTK 340 (352)
Q Consensus 290 ---~~~~----G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~----L~~lv~~f~~dp 340 (352)
..+. .+...+.+.++-+. ....+|++++|-|..+-|.- .+.+...+++.+
T Consensus 76 ~~~~~~~~~~~~~q~~a~~DCl~r~-~~~~~~v~f~DiDE~lvP~~~~~~~~~~~~~l~~~~ 136 (285)
T PF01697_consen 76 PFPDPNSSVERRGQIAAYNDCLLRY-RYRAKWVAFIDIDEFLVPTNAPTYPEEFEDLLREFP 136 (285)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHh-hhhceEEEEeccccEEEeccccchhhHHHHHHhhcc
Confidence 0000 01344556665542 45679999999999764433 566666665543
No 142
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit. GalF is a non-catalytic subunit of the UTP-glucose pyrophosphorylase modulating the enzyme activity to increase the formation of UDP-glucose
Probab=78.01 E-value=41 Score=32.46 Aligned_cols=103 Identities=13% Similarity=0.202 Sum_probs=60.9
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHH---------------HHHh---hhcCCeEEEe
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE---------------VLKW---QEAGANIVYR 287 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~---------------~~~~---~~~~v~ii~~ 287 (352)
++|+.+.+ .++-.+..+.+.... + |+|+-....+...+..... .+.. .+.++++.+.
T Consensus 28 LvpV~gkP-iI~~vl~~l~~~Gi~--~--ivivv~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 102 (297)
T TIGR01105 28 MLPIVDKP-MIQYIVDEIVAAGIK--E--IVLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV 102 (297)
T ss_pred eeEECCEE-HHHHHHHHHHHCCCC--E--EEEEecCChHHHHHHHhchHHHHHHHHHhcchhhhhhhhhcCCCCceEEEe
Confidence 56777766 888889998886533 2 4444443333333332210 0000 0125566666
Q ss_pred eccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCCh-------HHHHHHHHHHh
Q 018646 288 HRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNP-------DFLRRTVPHFK 337 (352)
Q Consensus 288 ~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~p-------d~L~~lv~~f~ 337 (352)
......| -++++..|.... .+.+++++. +|+..++ -.+.+++..+.
T Consensus 103 ~q~~~lG-tg~Av~~a~~~l--~~~~flvv~-gD~l~~~~~~~~~~~~l~~li~~~~ 155 (297)
T TIGR01105 103 RQAQPLG-LGHSILCARPVV--GDNPFVVVL-PDIIIDDATADPLRYNLAAMIARFN 155 (297)
T ss_pred eCCCcCc-hHHHHHHHHHHh--CCCCEEEEE-CCeeccccccccchhHHHHHHHHHH
Confidence 5655556 899999988862 344666665 8887654 37778887665
No 143
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=77.93 E-value=14 Score=36.75 Aligned_cols=112 Identities=12% Similarity=0.182 Sum_probs=68.3
Q ss_pred eEEEEEeccCCchhHHHHHHHHHcC-CCCCCeeEEEEEeCC--CChhHH--------------------HHHHH-H----
Q 018646 222 MVLVQIPMCNEKEVYQQSIAAVCNL-DWPKSKILIQVLDDS--DDPTAQ--------------------TLIKE-E---- 273 (352)
Q Consensus 222 ~VsViIPayNE~~vl~~tL~sl~~q-dyP~~~leIiVvDDs--sdd~t~--------------------~li~~-~---- 273 (352)
+|.|.|++|...+ ...||..+.++ .+| +++.|-|++-. +|+... ..... .
T Consensus 1 tIFvsiasyRD~~-c~~Tl~~~~~~A~~P-~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 78 (343)
T PF11397_consen 1 TIFVSIASYRDPE-CAPTLKDLFARATNP-ERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEW 78 (343)
T ss_pred CEEEEEeeecCch-HHHHHHHHHHhcCCC-ceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhccccccc
Confidence 3788999999975 78888888775 666 58888788742 222210 11110 0
Q ss_pred ---HHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 274 ---VLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 274 ---~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
...+....++++.++...-.| -..|...+.+. -.+-+|++.+|+.+...++|=..++..++.
T Consensus 79 ~~~~~~~~~~~Ir~~~~~~~~a~G-p~~AR~la~~l--~~gE~y~LqiDSH~rF~~~WD~~li~~~~~ 143 (343)
T PF11397_consen 79 PDGALCLRSDQIRVIRVDASEARG-PCWARYLAQKL--YRGEDYYLQIDSHMRFVPGWDEILIEMLKS 143 (343)
T ss_pred ccccccccCCeEEEEEeCHHHCcC-hHHHHHHHHHH--hCCCeEEEEEeccceeeccHHHHHHHHHHh
Confidence 000112334444443333334 33444444443 356799999999999999999999988864
No 144
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=77.49 E-value=44 Score=32.53 Aligned_cols=117 Identities=18% Similarity=0.256 Sum_probs=68.1
Q ss_pred CCeEEEEEeccCCc--hhHHHHHHHHHcCCCCCCe--eEE-EEEeCCCChhHHHHHHHHHHHhhh---cC-CeEEEeecc
Q 018646 220 FPMVLVQIPMCNEK--EVYQQSIAAVCNLDWPKSK--ILI-QVLDDSDDPTAQTLIKEEVLKWQE---AG-ANIVYRHRI 290 (352)
Q Consensus 220 ~P~VsViIPayNE~--~vl~~tL~sl~~qdyP~~~--leI-iVvDDssdd~t~~li~~~~~~~~~---~~-v~ii~~~r~ 290 (352)
-+.+.|=||+-..+ ..+.+||.|+++.--|.++ +.| +.+-|.+.+......+++...+.. .| +.++ +.+
T Consensus 51 ~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp~~~~~~~~~i~~~f~~~i~sG~l~VI--~~p 128 (297)
T PF04666_consen 51 GKKLCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDPDYHPSVAQNISTRFADHIESGLLEVI--SPP 128 (297)
T ss_pred CCeEEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCChhhhHHHHHHHHHHhHHHHHhCceEEE--ecc
Confidence 34588889987654 7899999999987666542 333 334454444444444444333321 12 2222 221
Q ss_pred CC-----------CCc--h------HHHHHHH--HhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC
Q 018646 291 LR-----------DGY--K------AGNLKSA--MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 291 ~~-----------~G~--K------a~aLn~a--l~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d 339 (352)
.. .|- + ..++.++ |.+. ...++|++.+..|.+..|+|+.++.......
T Consensus 129 ~~~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~-~~~~~YyL~LEDDVia~~~f~~~i~~~v~~~ 197 (297)
T PF04666_consen 129 PSYYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYC-QNLGDYYLQLEDDVIAAPGFLSRIKRFVEAW 197 (297)
T ss_pred cccCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHH-HhcCCeEEEecCCeEechhHHHHHHHHHHHh
Confidence 11 010 0 1123222 2221 2468999999999999999999998887653
No 145
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=77.35 E-value=33 Score=35.33 Aligned_cols=100 Identities=16% Similarity=0.193 Sum_probs=58.7
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|.-+. ..++.++..+.+.... + |+|+-....+...+.+ . ..++.+ .......| .++++..+++
T Consensus 29 llpi~gk-pli~~~l~~l~~~gi~--~--ivvv~~~~~~~i~~~~----~---~~~i~~--v~~~~~~G-t~~al~~~~~ 93 (481)
T PRK14358 29 LHPVAGR-PMVAWAVKAARDLGAR--K--IVVVTGHGAEQVEAAL----Q---GSGVAF--ARQEQQLG-TGDAFLSGAS 93 (481)
T ss_pred ecEECCe-eHHHHHHHHHHhCCCC--e--EEEEeCCCHHHHHHHh----c---cCCcEE--ecCCCcCC-cHHHHHHHHH
Confidence 3555554 6888999998876432 3 3333332223332222 1 234443 33333345 6888888877
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCc
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~ 341 (352)
.....+.+ ++++++|. .+.++.+++++..+.++..
T Consensus 94 ~l~~~~~~-~lV~~gD~P~i~~~~l~~ll~~~~~~~~ 129 (481)
T PRK14358 94 ALTEGDAD-ILVLYGDTPLLRPDTLRALVADHRAQGS 129 (481)
T ss_pred HhhCCCCc-EEEEeCCeeccCHHHHHHHHHHHHhcCC
Confidence 53112335 67799998 6788899999988765443
No 146
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=75.81 E-value=39 Score=34.05 Aligned_cols=100 Identities=8% Similarity=0.138 Sum_probs=57.3
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+. ..++.++.++.+.... ++ ++|+ ....+...+.++ +. .+++++ ......| -++++..+++
T Consensus 23 ll~v~gk-pli~~~l~~l~~~g~~--~i-ivvv-~~~~~~i~~~~~----~~--~~i~~v--~~~~~~G-~~~sv~~~~~ 88 (450)
T PRK14360 23 LHPLGGK-SLVERVLDSCEELKPD--RR-LVIV-GHQAEEVEQSLA----HL--PGLEFV--EQQPQLG-TGHAVQQLLP 88 (450)
T ss_pred cCEECCh-hHHHHHHHHHHhCCCC--eE-EEEE-CCCHHHHHHHhc----cc--CCeEEE--EeCCcCC-cHHHHHHHHH
Confidence 3454444 7999999999876443 23 2333 323333332221 11 134433 3333334 5677777776
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
... ...+.++++|+|. .+.++.+++++..+.+.+
T Consensus 89 ~l~-~~~~~vlV~~~D~P~i~~~~l~~ll~~~~~~~ 123 (450)
T PRK14360 89 VLK-GFEGDLLVLNGDVPLLRPETLEALLNTHRSSN 123 (450)
T ss_pred Hhh-ccCCcEEEEeCCccccCHHHHHHHHHHHHhcC
Confidence 421 1235678899998 578899999998876543
No 147
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=74.89 E-value=76 Score=29.90 Aligned_cols=98 Identities=12% Similarity=0.165 Sum_probs=64.0
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCcc
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd 313 (352)
..+.++.+...+.. .++ |+|.-| |+.+.+.++ ..|..++.......+| ..-+..+.+..-..+.+
T Consensus 29 pmI~rV~e~a~~s~--~~r--vvVATD--de~I~~av~-------~~G~~avmT~~~h~SG--TdR~~Ev~~~l~~~~~~ 93 (247)
T COG1212 29 PMIVRVAERALKSG--ADR--VVVATD--DERIAEAVQ-------AFGGEAVMTSKDHQSG--TDRLAEVVEKLGLPDDE 93 (247)
T ss_pred hHHHHHHHHHHHcC--CCe--EEEEcC--CHHHHHHHH-------HhCCEEEecCCCCCCc--cHHHHHHHHhcCCCcce
Confidence 45666666666542 223 344333 455555554 5677776554444445 55667777765345789
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEEEe
Q 018646 314 FVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 314 ~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
+|+-+-+|. ..+|..+.+++..++.+ +..+++.
T Consensus 94 iIVNvQGDeP~i~p~~I~~~~~~L~~~-~~~~aTl 127 (247)
T COG1212 94 IIVNVQGDEPFIEPEVIRAVAENLENS-NADMATL 127 (247)
T ss_pred EEEEccCCCCCCCHHHHHHHHHHHHhC-Ccceeee
Confidence 999999999 57999999999999964 6666653
No 148
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form. This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.
Probab=74.66 E-value=53 Score=31.44 Aligned_cols=100 Identities=14% Similarity=0.097 Sum_probs=58.9
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|.++. ..+.-.|..+...... ++. +|+.....+... +...+....++++.+...+...| -++++..+..
T Consensus 24 Llpv~gk-PmI~~~L~~l~~aGi~--~I~-iv~~~~~~~~~~----~~lg~g~~~g~~i~~~~q~~~~G-ta~al~~a~~ 94 (286)
T TIGR01207 24 LLPIYDK-PMIYYPLSTLMLAGIR--DIL-IISTPQDTPRFQ----QLLGDGSQWGVNLSYAVQPSPDG-LAQAFIIGED 94 (286)
T ss_pred eeEECCE-EhHHHHHHHHHHCCCC--EEE-EEecCCcHHHHH----HHhccccccCceEEEEEccCCCC-HHHHHHHHHH
Confidence 5788887 6888889888876533 222 233222222222 22222223467777776555455 8899988888
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
.. .+.++++++ +|+.....-+.+++....
T Consensus 95 ~l--~~~~~~li~-gD~i~~~~~l~~ll~~~~ 123 (286)
T TIGR01207 95 FI--GGDPSALVL-GDNIFYGHDLSDLLKRAA 123 (286)
T ss_pred Hh--CCCCEEEEE-CCEeccccCHHHHHHHHH
Confidence 63 344566655 776654455666666553
No 149
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety. CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.
Probab=74.07 E-value=55 Score=29.15 Aligned_cols=97 Identities=11% Similarity=0.164 Sum_probs=56.1
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc---CCCCchHHHHHHHHhcc
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI---LRDGYKAGNLKSAMNCS 307 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~---~~~G~Ka~aLn~al~~~ 307 (352)
+....++.+++.+.+..... . |+|+-| ++...+.++ ..++.+.+.... ....+..+.+..+++..
T Consensus 24 ~Gkpll~~~l~~l~~~~~~~-~--IvV~~~--~~~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 91 (223)
T cd02513 24 GGKPLIAWTIEAALESKLFD-R--VVVSTD--DEEIAEVAR-------KYGAEVPFLRPAELATDTASSIDVILHALDQL 91 (223)
T ss_pred CCccHHHHHHHHHHhCCCCC-E--EEEECC--cHHHHHHHH-------HhCCCceeeCChHHCCCCCCcHHHHHHHHHHH
Confidence 34568888999988754322 2 444332 334433332 223322222221 11112566777777642
Q ss_pred CC--CCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 308 YV--KDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 308 ~~--a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
.. .+.|.++++++|. .+.++.+++++..+..+
T Consensus 92 ~~~~~~~d~vlv~~~D~P~i~~~~i~~~i~~~~~~ 126 (223)
T cd02513 92 EELGRDFDIVVLLQPTSPLRSAEDIDEAIELLLSE 126 (223)
T ss_pred HHhCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHhC
Confidence 11 1258999999999 47999999999998753
No 150
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase. Members of this protein family are 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, the IspD protein of the deoxyxylulose pathway of IPP biosynthesis. In about twenty percent of bacterial genomes, this protein occurs as IspDF, a bifunctional fusion protein.
Probab=73.87 E-value=61 Score=28.97 Aligned_cols=94 Identities=14% Similarity=0.157 Sum_probs=55.8
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCC-ChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSD-DPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV 309 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDss-dd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~ 309 (352)
+....++.+++.+.+..... + |+|+-+.. .+....... .. ..+.++ . ...+ ...++..|+...
T Consensus 25 ~gkpll~~~l~~l~~~~~~~-~--ivVv~~~~~~~~~~~~~~-------~~-~~~~~~-~-~~~~-~~~sl~~~l~~~-- 88 (217)
T TIGR00453 25 GGRPLLEHTLDAFLAHPAID-E--VVVVVSPEDQEFFQKYLV-------AR-AVPKIV-A-GGDT-RQDSVRNGLKAL-- 88 (217)
T ss_pred CCeEHHHHHHHHHhcCCCCC-E--EEEEEChHHHHHHHHHhh-------cC-CcEEEe-C-CCch-HHHHHHHHHHhC--
Confidence 44578999999998753222 3 33333322 122221111 11 112222 1 1222 457788888852
Q ss_pred CCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 310 KDYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 310 a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
.+.|+++++++|. .++++.+++++..+..++
T Consensus 89 ~~~d~vlv~~~D~P~i~~~~i~~li~~~~~~~ 120 (217)
T TIGR00453 89 KDAEWVLVHDAARPFVPKELLDRLLEALRKAG 120 (217)
T ss_pred CCCCEEEEccCccCCCCHHHHHHHHHHHhhCC
Confidence 2578999999999 689999999999887543
No 151
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=73.13 E-value=10 Score=34.99 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=40.8
Q ss_pred eEEEEEeCCCChh--HHHHHHHHHHHhhhcCCeEEEeeccCCCCc------h---HHHHHHHHhccC----CCCccEEEE
Q 018646 253 ILIQVLDDSDDPT--AQTLIKEEVLKWQEAGANIVYRHRILRDGY------K---AGNLKSAMNCSY----VKDYEFVAI 317 (352)
Q Consensus 253 leIiVvDDssdd~--t~~li~~~~~~~~~~~v~ii~~~r~~~~G~------K---a~aLn~al~~~~----~a~gd~V~~ 317 (352)
+.-|||+|+...+ +..+++ +.|+...+..-+..... | ....|.|++..- ....-+|.|
T Consensus 11 l~WIVVEd~~~~~~~v~~lL~-------~sgl~y~hL~~~~p~~~~~~~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyF 83 (207)
T PF03360_consen 11 LHWIVVEDSEETTPLVARLLR-------RSGLPYTHLNVKTPSNFKDPRWIKPRGVHQRNAALRWIRNNANHRLDGVVYF 83 (207)
T ss_dssp EEEEEEESSSS--HHHHHHHH-------HHTSEEEEEE----HHHH-------TSHHHHHHHHHHHHSTTTSSS-EEEEE
T ss_pred eEEEEEeCCCCCCHHHHHHHH-------HcCCceeEEecCCccccccccccccccHHHHHHHHHHHHhcccCCCCcEEEE
Confidence 7779999975443 444544 45666665544331111 1 346677876542 245678889
Q ss_pred EcCCCCCChHHHHHH
Q 018646 318 FDADFQPNPDFLRRT 332 (352)
Q Consensus 318 lDAD~~~~pd~L~~l 332 (352)
.|.|...+....+++
T Consensus 84 aDDdNtYdl~LF~em 98 (207)
T PF03360_consen 84 ADDDNTYDLRLFDEM 98 (207)
T ss_dssp --TTSEE-HHHHHHH
T ss_pred CCCCCeeeHHHHHHH
Confidence 999999999888874
No 152
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=73.08 E-value=53 Score=31.09 Aligned_cols=90 Identities=16% Similarity=0.174 Sum_probs=50.5
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+....++.++..+....... + |+|+-.... .+.+++.... ...+++++ ..+...| .++++..+..
T Consensus 26 ll~l~g~~~li~~~l~~l~~~~~~~-~--i~vvt~~~~---~~~v~~~l~~-~~~~~~ii--~ep~~~g-Ta~ai~~a~~ 95 (274)
T cd02509 26 FLKLFGDKSLLQQTLDRLKGLVPPD-R--ILVVTNEEY---RFLVREQLPE-GLPEENII--LEPEGRN-TAPAIALAAL 95 (274)
T ss_pred EeEcCCCCcHHHHHHHHHhcCCCCC-c--EEEEechHH---HHHHHHHHhh-cCCCceEE--ECCCCCC-cHHHHHHHHH
Confidence 4666776789999999988764222 3 333333211 1223322222 11234443 3343445 6778877766
Q ss_pred ccCC-CCccEEEEEcCCCCCC
Q 018646 306 CSYV-KDYEFVAIFDADFQPN 325 (352)
Q Consensus 306 ~~~~-a~gd~V~~lDAD~~~~ 325 (352)
+... ...++++++.+|+...
T Consensus 96 ~~~~~~~~~~vlVl~~D~~i~ 116 (274)
T cd02509 96 YLAKRDPDAVLLVLPSDHLIE 116 (274)
T ss_pred HHHhcCCCCeEEEecchhccc
Confidence 4311 2357999999999875
No 153
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=72.68 E-value=45 Score=29.88 Aligned_cols=89 Identities=9% Similarity=0.097 Sum_probs=54.6
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+... . +. |+|+-. ..+.. +... ..+++++.. .....| -..++..|+++ .
T Consensus 31 ~g~~ll~~~i~~l~~~-~--~~--ivvv~~-~~~~~----~~~~----~~~~~~i~~-~~~~~G-~~~si~~~l~~---~ 91 (200)
T PRK02726 31 QGVPLLQRVARIAAAC-A--DE--VYIITP-WPERY----QSLL----PPGCHWLRE-PPPSQG-PLVAFAQGLPQ---I 91 (200)
T ss_pred CCEeHHHHHHHHHHhh-C--CE--EEEECC-CHHHH----Hhhc----cCCCeEecC-CCCCCC-hHHHHHHHHHh---C
Confidence 4456888888888653 1 22 344432 11111 1111 224444321 222244 66788999985 3
Q ss_pred CccEEEEEcCCCC-CChHHHHHHHHHHhc
Q 018646 311 DYEFVAIFDADFQ-PNPDFLRRTVPHFKV 338 (352)
Q Consensus 311 ~gd~V~~lDAD~~-~~pd~L~~lv~~f~~ 338 (352)
+.++++++++|.- ++++.+++++..+..
T Consensus 92 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 120 (200)
T PRK02726 92 KTEWVLLLACDLPRLTVDVLQEWLQQLEN 120 (200)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHhhc
Confidence 5699999999994 699999999998864
No 154
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=72.50 E-value=36 Score=31.50 Aligned_cols=116 Identities=10% Similarity=-0.031 Sum_probs=57.2
Q ss_pred EEEeccCC--chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCC--------
Q 018646 225 VQIPMCNE--KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG-------- 294 (352)
Q Consensus 225 ViIPayNE--~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G-------- 294 (352)
|++.+.+. ...+.-++.|++..+-. .+.++|++|+-.++..+.++...+.+ ...+.++.........
T Consensus 3 i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 79 (246)
T cd00505 3 IVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLY-NFNYELIPVDILDSVDSEHLKRPI 79 (246)
T ss_pred EEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhcc-CceEEEEeccccCcchhhhhcCcc
Confidence 44445443 37778889998875432 47788887765555555554433221 2223333221111110
Q ss_pred chHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEE
Q 018646 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 295 ~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
.+..-....+..... +.+-|+.+|+|+++..| +.++-....++..+|+|
T Consensus 80 ~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~d-i~~L~~~~l~~~~~aav 128 (246)
T cd00505 80 KIVTLTKLHLPNLVP-DYDKILYVDADILVLTD-IDELWDTPLGGQELAAA 128 (246)
T ss_pred ccceeHHHHHHHHhh-ccCeEEEEcCCeeeccC-HHHHhhccCCCCeEEEc
Confidence 001001112222223 68999999999988644 23333322223445554
No 155
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=71.70 E-value=58 Score=32.84 Aligned_cols=95 Identities=9% Similarity=0.125 Sum_probs=57.5
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|.-+. ..++.++.++.+.... ++ ++++. ..++...+.+ ..++.+ .......| .++++..++..
T Consensus 25 l~i~Gk-pli~~~l~~l~~~gi~--~i-ivvv~-~~~~~i~~~~--------~~~~~~--~~~~~~~g-~~~al~~a~~~ 88 (458)
T PRK14354 25 HKVCGK-PMVEHVVDSVKKAGID--KI-VTVVG-HGAEEVKEVL--------GDRSEF--ALQEEQLG-TGHAVMQAEEF 88 (458)
T ss_pred CEeCCc-cHHHHHHHHHHhCCCC--eE-EEEeC-CCHHHHHHHh--------cCCcEE--EEcCCCCC-HHHHHHHHHHH
Confidence 455565 7899999999875432 23 23333 2233332222 112332 23333344 67888888775
Q ss_pred cCCCCccEEEEEcCCC-CCChHHHHHHHHHHhc
Q 018646 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKV 338 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~ 338 (352)
. ....|.++++++|. ...++.+++++..+++
T Consensus 89 l-~~~~d~vlv~~~D~p~i~~~~l~~li~~~~~ 120 (458)
T PRK14354 89 L-ADKEGTTLVICGDTPLITAETLKNLIDFHEE 120 (458)
T ss_pred h-cccCCeEEEEECCccccCHHHHHHHHHHHHh
Confidence 2 11247899999998 6789999999988754
No 156
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=70.96 E-value=75 Score=32.00 Aligned_cols=102 Identities=12% Similarity=0.078 Sum_probs=61.3
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+. ..++.+|.++.+.. ++ |+|+-+...+.. ++.. ..++.+ .......| .++++..++.
T Consensus 22 l~~v~gk-pli~~~l~~l~~~~---~~--i~vv~~~~~~~i----~~~~----~~~~~~--~~~~~~~g-~~~ai~~a~~ 84 (448)
T PRK14357 22 LHKISGK-PMINWVIDTAKKVA---QK--VGVVLGHEAELV----KKLL----PEWVKI--FLQEEQLG-TAHAVMCARD 84 (448)
T ss_pred eeEECCe-eHHHHHHHHHHhcC---Cc--EEEEeCCCHHHH----HHhc----ccccEE--EecCCCCC-hHHHHHHHHH
Confidence 4566565 68889999888752 23 333333222222 2221 223443 23333345 7888888887
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC-CcEEEEE
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT-KLIGFFL 346 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d-p~vg~Vq 346 (352)
.. .+.|.++++++|. ...+..+++++..+++. .++.++.
T Consensus 85 ~l--~~~~~vlv~~gD~p~i~~~~i~~l~~~~~~~~~d~ti~~ 125 (448)
T PRK14357 85 FI--EPGDDLLILYGDVPLISENTLKRLIEEHNRKGADVTILV 125 (448)
T ss_pred hc--CcCCeEEEEeCCcccCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 52 2358899999998 56788889999887643 3444443
No 157
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase. This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.
Probab=69.65 E-value=78 Score=28.83 Aligned_cols=98 Identities=14% Similarity=0.099 Sum_probs=53.9
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCC-CChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDS-DDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDs-sdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
+|.-+ ...+..++.++.+.... + |+++-.. ..+... +........++++.+.......| -++++..+..
T Consensus 26 lpv~~-~pli~~~l~~l~~~gi~--~--i~vv~~~~~~~~~~----~~l~~~~~~~~~i~~~~~~~~~G-~~~al~~a~~ 95 (240)
T cd02538 26 LPVYD-KPMIYYPLSTLMLAGIR--E--ILIISTPEDLPLFK----ELLGDGSDLGIRITYAVQPKPGG-LAQAFIIGEE 95 (240)
T ss_pred eEECC-EEhHHHHHHHHHHCCCC--E--EEEEeCcchHHHHH----HHHhcccccCceEEEeeCCCCCC-HHHHHHHHHH
Confidence 45444 46888899988875433 2 4443332 212222 22222122345666554433344 7888888877
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
.. +.|-++++.+|....+.-+.+++....
T Consensus 96 ~~---~~~~~lv~~gD~~~~~~~~~~~~~~~~ 124 (240)
T cd02538 96 FI---GDDPVCLILGDNIFYGQGLSPILQRAA 124 (240)
T ss_pred hc---CCCCEEEEECCEEEccHHHHHHHHHHH
Confidence 52 334456668887665555667776554
No 158
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=69.54 E-value=44 Score=32.06 Aligned_cols=100 Identities=13% Similarity=0.168 Sum_probs=55.5
Q ss_pred eEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc---C------C
Q 018646 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI---L------R 292 (352)
Q Consensus 222 ~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~---~------~ 292 (352)
+++|+....|-.+.+..++.|++.-. ...+.+.|++|+.+++..+.+.+. ....++++....-. . +
T Consensus 2 ~~~iv~~~~~y~~~~~~~i~Sil~n~--~~~~~fhii~d~~s~~~~~~l~~~---~~~~~~~i~f~~i~~~~~~~~~~~~ 76 (280)
T cd06431 2 HVAIVCAGYNASRDVVTLVKSVLFYR--RNPLHFHLITDEIARRILATLFQT---WMVPAVEVSFYNAEELKSRVSWIPN 76 (280)
T ss_pred EEEEEEccCCcHHHHHHHHHHHHHcC--CCCEEEEEEECCcCHHHHHHHHHh---ccccCcEEEEEEhHHhhhhhccCcc
Confidence 46777777555578888999998743 234788888775544433222222 22234444443321 0 1
Q ss_pred CCchHHH---HHHHHhccCCCCccEEEEEcCCCCCChH
Q 018646 293 DGYKAGN---LKSAMNCSYVKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 293 ~G~Ka~a---Ln~al~~~~~a~gd~V~~lDAD~~~~pd 327 (352)
.+ .... ....+....+.+.|-|+.+|+|.++..|
T Consensus 77 ~~-~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~d 113 (280)
T cd06431 77 KH-YSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATD 113 (280)
T ss_pred cc-hhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCC
Confidence 11 1111 1222332233468999999999998655
No 159
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=69.52 E-value=11 Score=35.09 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=48.8
Q ss_pred eEEEEEeccCCchhHHHHHHHHHc----CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchH
Q 018646 222 MVLVQIPMCNEKEVYQQSIAAVCN----LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (352)
Q Consensus 222 ~VsViIPayNE~~vl~~tL~sl~~----qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka 297 (352)
+|.||||-+|..+.+...+..+.. |.- .+.|+|++-.++.. -. |+
T Consensus 3 ~~aiivpyr~R~~~l~~~l~~~~~~L~rq~~---~~~i~vi~Q~~~~~---------------------------FN-R~ 51 (219)
T cd00899 3 KVAIIVPFRNRFEHLLIFLPHLHPFLQRQQL---DYRIFVIEQVGNFR---------------------------FN-RA 51 (219)
T ss_pred ceEEEEecCCHHHHHHHHHHHHHHHHHhcCC---cEEEEEEEecCCcc---------------------------ch-hh
Confidence 689999999998777777665432 322 24566654322110 11 44
Q ss_pred HHHHHHHhccC-CCCccEEEEEcCCCCCChHHHH
Q 018646 298 GNLKSAMNCSY-VKDYEFVAIFDADFQPNPDFLR 330 (352)
Q Consensus 298 ~aLn~al~~~~-~a~gd~V~~lDAD~~~~pd~L~ 330 (352)
..+|.|+.... ..+.+++++-|-|..|..+.+.
T Consensus 52 ~llNvG~~~a~k~~~~dc~i~hDVDllP~~~~~~ 85 (219)
T cd00899 52 KLLNVGFLEALKDGDWDCFIFHDVDLLPENDRNL 85 (219)
T ss_pred hhhhHHHHHHhhcCCccEEEEecccccccCcccc
Confidence 44555433211 2357999999999999988765
No 160
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=68.35 E-value=42 Score=30.86 Aligned_cols=91 Identities=16% Similarity=0.122 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCC------C-Cc-hHHHHHHHHh
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR------D-GY-KAGNLKSAMN 305 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~------~-G~-Ka~aLn~al~ 305 (352)
..+..++.|+.... +...+.++|+.++-++...+.+++..... ..++++..+..+.. . .. +..-...-+.
T Consensus 13 ~~~~~~l~Sl~~~~-~~~~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl~l~ 90 (248)
T cd04194 13 PYLAVTIKSILANN-SKRDYDFYILNDDISEENKKKLKELLKKY-NSSIEFIKIDNDDFKFFPATTDHISYATYYRLLIP 90 (248)
T ss_pred HHHHHHHHHHHhcC-CCCceEEEEEeCCCCHHHHHHHHHHHHhc-CCeEEEEEcCHHHHhcCCcccccccHHHHHHHHHH
Confidence 67778888888743 22347788777766666666665554331 22333332221101 0 10 1111111222
Q ss_pred ccCCCCccEEEEEcCCCCCChH
Q 018646 306 CSYVKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd 327 (352)
... .+.+-|+.+|+|.++..|
T Consensus 91 ~ll-~~~~rvlylD~D~lv~~d 111 (248)
T cd04194 91 DLL-PDYDKVLYLDADIIVLGD 111 (248)
T ss_pred HHh-cccCEEEEEeCCEEecCC
Confidence 212 368999999999987554
No 161
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch. ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.
Probab=68.28 E-value=49 Score=29.36 Aligned_cols=107 Identities=14% Similarity=0.181 Sum_probs=58.4
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhh----hcCCeEEEee----ccCCCCchH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ----EAGANIVYRH----RILRDGYKA 297 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~----~~~v~ii~~~----r~~~~G~Ka 297 (352)
++|..|....++-++..+.+.... + |+|+-....+...+...+. ..+. ..++.+.+.. .....| -+
T Consensus 23 llpv~g~~pli~~~l~~l~~~gi~--~--iivv~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G-ta 96 (200)
T cd02508 23 AVPFGGRYRLIDFPLSNMVNSGIR--N--VGVLTQYKSRSLNDHLGSG-KEWDLDRKNGGLFILPPQQRKGGDWYRG-TA 96 (200)
T ss_pred eeEECCeeeeHHHHHHHHHHCCCC--E--EEEEeCCChHHHHHHHhCC-CcccCCCCCCCEEEeCcccCCCCCcccC-cH
Confidence 677778746888899998886432 2 4444443334333322210 0010 1122333211 112234 78
Q ss_pred HHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC
Q 018646 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 298 ~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d 339 (352)
+++..|.......+.|.++++-+|.+. +.-+.+++..++++
T Consensus 97 ~al~~a~~~i~~~~~~~~lv~~gD~v~-~~~~~~~l~~~~~~ 137 (200)
T cd02508 97 DAIYQNLDYIERSDPEYVLILSGDHIY-NMDYREMLDFHIES 137 (200)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCCEEE-ecCHHHHHHHHHHc
Confidence 888888775312235778899999954 44577777766543
No 162
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.
Probab=68.22 E-value=74 Score=29.37 Aligned_cols=102 Identities=10% Similarity=0.071 Sum_probs=57.3
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEe------ecc---------
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYR------HRI--------- 290 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~------~r~--------- 290 (352)
++|..+.+ .+.-++..+.+.+.. + |+|+-....+.+.+.++..... ..++++.+. ..+
T Consensus 23 llpv~~~p-~i~~~~~~~~~~gi~--~--i~iv~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (253)
T cd02524 23 MVEIGGRP-ILWHIMKIYSHYGHN--D--FILCLGYKGHVIKEYFLNYFLH--NSDVTIDLGTNRIELHNSDIEDWKVTL 95 (253)
T ss_pred EEEECCEE-HHHHHHHHHHhCCCc--e--EEEECCCCHHHHHHHHHhhhhh--cCceeEeecccceeeecccccccceee
Confidence 56766665 888888888876433 2 4444443344444333321100 111222110 011
Q ss_pred ----CCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 291 ----LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 291 ----~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
...| .++++-.++++. .+.+.++++++|.+.+.+. ..++..+..
T Consensus 96 ~~~~~~~~-t~~al~~a~~~~--~~~~~~lv~~gD~i~~~dl-~~ll~~h~~ 143 (253)
T cd02524 96 VDTGLNTM-TGGRLKRVRRYL--GDDETFMLTYGDGVSDVNI-NALIEFHRS 143 (253)
T ss_pred cccCcccc-cHHHHHHHHHhc--CCCCeEEEEcCCEEECCCH-HHHHHHHHH
Confidence 1223 577888888852 2227899999999988887 888876654
No 163
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form. Alternate name: dTDP-D-glucose synthase
Probab=67.45 E-value=64 Score=31.43 Aligned_cols=97 Identities=19% Similarity=0.243 Sum_probs=57.1
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCC-CChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDS-DDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDs-sdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
+|.-+. ..+..++.++.+.... + |+|+-.. ..+...+.+. .....++++.+.......| .++++..++.
T Consensus 25 ~pv~g~-pli~~~l~~l~~~gi~--~--i~vv~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~G-~~~al~~a~~ 94 (353)
T TIGR01208 25 IPVANK-PILQYAIEDLAEAGIT--D--IGIVVGPVTGEEIKEIVG----EGERFGAKITYIVQGEPLG-LAHAVYTARD 94 (353)
T ss_pred cEECCE-eHHHHHHHHHHHCCCC--E--EEEEeCCCCHHHHHHHHh----cccccCceEEEEECCCCCC-HHHHHHHHHH
Confidence 455555 7899999999886422 2 4444343 3344333332 2122345555655444455 8889988888
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
.. .+.+ ++++.+|...+.+ +.+++..+.
T Consensus 95 ~l--~~~~-~li~~gD~~~~~~-l~~l~~~~~ 122 (353)
T TIGR01208 95 FL--GDDD-FVVYLGDNLIQDG-ISRFVKSFE 122 (353)
T ss_pred hc--CCCC-EEEEECCeecCcc-HHHHHHHHH
Confidence 52 3345 4566799987654 566777665
No 164
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=67.02 E-value=23 Score=31.54 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=55.1
Q ss_pred hhHHHHHHHHHcCCCCCCeeEE-EEEeCCC--ChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchH-HHHHHHHhccCC
Q 018646 234 EVYQQSIAAVCNLDWPKSKILI-QVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA-GNLKSAMNCSYV 309 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leI-iVvDDss--dd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka-~aLn~al~~~~~ 309 (352)
+.+++|-.+...+.-.. +.+ +|+-.+. +....+.++++.+++.+. +.......-.+...|. .+++.+.++ .
T Consensus 4 ~~IR~TW~~~~~~~~~~--~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Di-l~~d~~D~y~nlt~K~~~~~~w~~~~--c 78 (195)
T PF01762_consen 4 QAIRETWGNQRNFKGVR--VKVVFVVGESPNSDSDLQEALQEEAEKYGDI-LQGDFVDSYRNLTLKTLAGLKWASKH--C 78 (195)
T ss_pred HHHHHHHhcccccCCCc--EEEEEEEecCCCCcHHHHHHhhhhhhhcCce-EeeecccccchhhHHHHHHHHHHHhh--C
Confidence 45666666655433222 444 4444433 555666566555554422 1111111112222344 345556664 3
Q ss_pred CCccEEEEEcCCCCCChHHHHHHHHHH
Q 018646 310 KDYEFVAIFDADFQPNPDFLRRTVPHF 336 (352)
Q Consensus 310 a~gd~V~~lDAD~~~~pd~L~~lv~~f 336 (352)
.+.+||+.+|.|+.+.++-|.+.+...
T Consensus 79 ~~~~~v~k~DDD~~vn~~~l~~~L~~~ 105 (195)
T PF01762_consen 79 PNAKYVLKVDDDVFVNPDRLVSFLKSL 105 (195)
T ss_pred CchhheeecCcEEEEehHHhhhhhhhc
Confidence 558999999999999999888877776
No 165
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=66.80 E-value=82 Score=31.90 Aligned_cols=103 Identities=16% Similarity=0.111 Sum_probs=58.7
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..+ ...++.+++.+.+..-. ++.+ ++ ....+... +... ..++++ +......| -++++..++.
T Consensus 27 l~~i~g-kpli~~~i~~l~~~gi~--~i~v-v~-~~~~~~i~----~~~~---~~~~~~--i~~~~~~G-t~~al~~a~~ 91 (456)
T PRK09451 27 LHTLAG-KPMVQHVIDAANELGAQ--HVHL-VY-GHGGDLLK----QTLA---DEPLNW--VLQAEQLG-TGHAMQQAAP 91 (456)
T ss_pred cceeCC-hhHHHHHHHHHHhcCCC--cEEE-EE-CCCHHHHH----Hhhc---cCCcEE--EECCCCCC-cHHHHHHHHH
Confidence 345555 45888888888776432 3333 32 22222222 2211 223443 33333334 7888888887
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEEE
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
.. .+.+.++++++|. .+.++.+++++....+ .++.++.
T Consensus 92 ~l--~~~~~vlV~~gD~P~i~~~~i~~l~~~~~~-~~~~i~~ 130 (456)
T PRK09451 92 FF--ADDEDILMLYGDVPLISVETLQRLRDAKPQ-GGIGLLT 130 (456)
T ss_pred hh--ccCCcEEEEeCCcccCCHHHHHHHHHHhhc-CCEEEEE
Confidence 52 3457899999998 5688889888876543 3344443
No 166
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of gamma subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit gamma shares sequence similarity with epsilon subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=66.40 E-value=73 Score=28.65 Aligned_cols=107 Identities=11% Similarity=0.131 Sum_probs=57.1
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhh---hcCCeEEEeeccCCCCchHHHHHH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ---EAGANIVYRHRILRDGYKAGNLKS 302 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~---~~~v~ii~~~r~~~~G~Ka~aLn~ 302 (352)
++|.-|. ..+.-++..+.+.... ++ ++|+.....+..+ ...+.+. ..+..+++.......| -++++..
T Consensus 25 Llpv~g~-pli~~~l~~l~~~g~~--~i-ivv~~~~~~~~i~----~~l~~~~~~~~~~~~~~~~~~~~~~g-t~~al~~ 95 (214)
T cd04198 25 LLPVANK-PMIWYPLDWLEKAGFE--DV-IVVVPEEEQAEIS----TYLRSFPLNLKQKLDEVTIVLDEDMG-TADSLRH 95 (214)
T ss_pred cCEECCe-eHHHHHHHHHHHCCCC--eE-EEEECHHHHHHHH----HHHHhcccccCcceeEEEecCCCCcC-hHHHHHH
Confidence 4566676 6888899998875332 23 2333221222233 3332221 1123333443344445 7888888
Q ss_pred HHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC-CcEEEEE
Q 018646 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT-KLIGFFL 346 (352)
Q Consensus 303 al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d-p~vg~Vq 346 (352)
+..+ .+.+ ++++.+|.+.+.+ +..++..+..+ ..+.++.
T Consensus 96 ~~~~---i~~d-~lv~~~D~i~~~~-l~~~l~~h~~~~~~~t~~~ 135 (214)
T cd04198 96 IRKK---IKKD-FLVLSCDLITDLP-LIELVDLHRSHDASLTVLL 135 (214)
T ss_pred HHhh---cCCC-EEEEeCccccccC-HHHHHHHHhccCCcEEEEE
Confidence 8885 2334 7888999776555 45666666543 3444443
No 167
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase. Members of this family are the enzyme glucose-1-phosphate cytidylyltransferase, also called CDP-glucose pyrophosphorylase, the product of the rfbF gene.
Probab=66.18 E-value=90 Score=29.03 Aligned_cols=106 Identities=8% Similarity=-0.010 Sum_probs=56.2
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhh--cCCeEEE-----------------
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE--AGANIVY----------------- 286 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~--~~v~ii~----------------- 286 (352)
++|.-|.+ .+..++.++.+.... + |+|+-....+.+.+.+. +... .++++.+
T Consensus 24 llpv~g~p-ii~~~l~~l~~~gi~--~--i~iv~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (254)
T TIGR02623 24 MVEIGGKP-ILWHIMKIYSHHGIN--D--FIICCGYKGYVIKEYFA----NYFLHMSDVTFHMADNTMEVHHKRVEPWRV 94 (254)
T ss_pred eeEECCEE-HHHHHHHHHHHCCCC--E--EEEEcCCCHHHHHHHHH----hhhhcccCeeEEecccccccccccCCccce
Confidence 46666666 888889998876322 2 44444433333333332 2111 1222221
Q ss_pred --eeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHH-hcCCcEEEE
Q 018646 287 --RHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF-KVTKLIGFF 345 (352)
Q Consensus 287 --~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f-~~dp~vg~V 345 (352)
.......| -++++..+..+. +.+.++++++|.+.+.|+- +++... +.+.++-++
T Consensus 95 ~~~~~~~~~g-t~~al~~~~~~i---~~e~flv~~gD~i~~~dl~-~~~~~h~~~~~d~tl~ 151 (254)
T TIGR02623 95 TLVDTGESTQ-TGGRLKRVREYL---DDEAFCFTYGDGVADIDIK-ALIAFHRKHGKKATVT 151 (254)
T ss_pred eeeecCCcCC-cHHHHHHHHHhc---CCCeEEEEeCCeEecCCHH-HHHHHHHHcCCCEEEE
Confidence 11112233 678888888752 3456779999998766544 555543 433444443
No 168
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=65.86 E-value=71 Score=30.86 Aligned_cols=100 Identities=22% Similarity=0.273 Sum_probs=63.4
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|+|+.+ .+.-+|..+....-.. + ++|+...+.+..+++.. +-.+.++++.|...+...| -+.|+-.|-.
T Consensus 25 LlpV~~KP-mi~y~l~~L~~aGI~d--I-~II~~~~~~~~~~~llG----dgs~~gv~itY~~Q~~p~G-lA~Av~~a~~ 95 (286)
T COG1209 25 LLPVYDKP-MIYYPLETLMLAGIRD--I-LIVVGPEDKPTFKELLG----DGSDFGVDITYAVQPEPDG-LAHAVLIAED 95 (286)
T ss_pred cceecCcc-hhHhHHHHHHHcCCce--E-EEEecCCchhhhhhhhc----CccccCcceEEEecCCCCc-HHHHHHHHHh
Confidence 37888876 6667777777654332 2 24444445555544432 2235688999998877777 8888777766
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
. ..+.++++++. |.+..- =+.+.+.+|.+
T Consensus 96 f--v~~~~f~l~LG-DNi~~~-~l~~~~~~~~~ 124 (286)
T COG1209 96 F--VGDDDFVLYLG-DNIFQD-GLSELLEHFAE 124 (286)
T ss_pred h--cCCCceEEEec-Cceecc-ChHHHHHHHhc
Confidence 5 34566666665 555544 66777777764
No 169
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=65.71 E-value=95 Score=29.25 Aligned_cols=92 Identities=14% Similarity=0.121 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeC-CCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDD-ssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
..+..+++.+.+..... + |+|+-. ...+.. +....+ .+..+.+. ..+.+ ..+.+..|++.. ..+.
T Consensus 53 pll~~tl~~~~~~~~i~-~--IvVV~~~~~~~~~----~~~~~~---~~~~i~~v--~gg~~-r~~SV~~gl~~l-~~~~ 118 (252)
T PLN02728 53 PIALYSLYTFARMPEVK-E--IVVVCDPSYRDVF----EEAVEN---IDVPLKFA--LPGKE-RQDSVFNGLQEV-DANS 118 (252)
T ss_pred EHHHHHHHHHHhCCCCC-e--EEEEeCHHHHHHH----HHHHHh---cCCceEEc--CCCCc-hHHHHHHHHHhc-cCCC
Confidence 57888888887642222 3 333333 222222 222222 22334332 12233 466788888753 2357
Q ss_pred cEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 313 EFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 313 d~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
++|++.|+|- .+.++.+.+++.....+
T Consensus 119 ~~VlihDaarP~vs~~~i~~li~~~~~~ 146 (252)
T PLN02728 119 ELVCIHDSARPLVTSADIEKVLKDAAVH 146 (252)
T ss_pred CEEEEecCcCCCCCHHHHHHHHHHHhhC
Confidence 8999999977 67999999999887654
No 170
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=65.19 E-value=10 Score=32.64 Aligned_cols=77 Identities=16% Similarity=0.225 Sum_probs=43.1
Q ss_pred CCeEEEEEeccCCchhHHHHHHHH----HcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCc
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAV----CNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl----~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~ 295 (352)
.-+|.||||-+|.++.+...+..+ .+|.. .+.|+|++-.++..- .
T Consensus 46 ~~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~---~y~I~vieQ~~~~~F---------------------------N- 94 (136)
T PF13733_consen 46 RHKVAIIIPYRDREEHLRIFLPHLHPFLQRQQL---DYRIFVIEQVDNGPF---------------------------N- 94 (136)
T ss_dssp S-EEEEEEEESS-HHHHHHHHHHHHHHHHHTT----EEEEEEEEE-SSS-------------------------------
T ss_pred ccceEEEEEeCCHHHHHHHHHHHHHHHHhhCcc---eEEEEEEeeccCCCC---------------------------c-
Confidence 348999999999997777776654 23432 477888875443221 1
Q ss_pred hHHHHHHHHhccC-CCCccEEEEEcCCCCCChH
Q 018646 296 KAGNLKSAMNCSY-VKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 296 Ka~aLn~al~~~~-~a~gd~V~~lDAD~~~~pd 327 (352)
|+.=+|.|+.... ..+.|+++|=|-|.+|..+
T Consensus 95 Rg~L~NvGf~eA~~~~~~dc~ifHDVDllP~~~ 127 (136)
T PF13733_consen 95 RGKLMNVGFLEALKDDDFDCFIFHDVDLLPEND 127 (136)
T ss_dssp HHHHHHHHHHHHHHHS--SEEEEE-TTEEESBT
T ss_pred hhhhhhHHHHHHhhccCCCEEEEecccccccCC
Confidence 2223333322110 1368999999999988654
No 171
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=63.42 E-value=5.3 Score=39.38 Aligned_cols=18 Identities=17% Similarity=0.255 Sum_probs=16.3
Q ss_pred CCccEEEEEcCCCCCChH
Q 018646 310 KDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 310 a~gd~V~~lDAD~~~~pd 327 (352)
++.+|++.+|.|+.|..|
T Consensus 92 s~~~yivsiDDD~~Pa~d 109 (346)
T PLN03180 92 SKKKYIFTIDDDCFVAKD 109 (346)
T ss_pred ecceEEEEECCCCCCCCC
Confidence 578999999999999777
No 172
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2. N-terminal domain of epsilon subunit of the eukaryotic translation initiation factor 2B (eIF-2B): eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=61.81 E-value=1.1e+02 Score=27.51 Aligned_cols=103 Identities=11% Similarity=0.039 Sum_probs=53.1
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhc--CCeEEEeeccCCCCchHHHHHHH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEA--GANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~--~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
++|..|. ..+.-.+..+.+..... |+|+-....+.+.+.++... .+... +..+.+.......| -++++...
T Consensus 25 llpi~g~-piI~~~l~~l~~~Gi~~----I~iv~~~~~~~i~~~l~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~al~~~ 97 (217)
T cd04197 25 LLPLANV-PLIDYTLEFLALNGVEE----VFVFCCSHSDQIKEYIEKSK-WSKPKSSLMIVIIIMSEDCRS-LGDALRDL 97 (217)
T ss_pred eeEECCE-ehHHHHHHHHHHCCCCe----EEEEeCCCHHHHHHHHhhcc-ccccccCcceEEEEeCCCcCc-cchHHHHH
Confidence 5677787 59999999999865332 44444444444444333210 01100 13444443333233 44555433
Q ss_pred HhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 304 l~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
..+. .-+ +.++++.+|.+...+ +.+++.++++
T Consensus 98 ~~~~-~~~-~~flv~~gD~i~~~d-l~~~l~~h~~ 129 (217)
T cd04197 98 DAKG-LIR-GDFILVSGDVVSNID-LKEILEEHKE 129 (217)
T ss_pred hhcc-ccC-CCEEEEeCCeeeccC-HHHHHHHHHH
Confidence 2211 112 346699999988766 4466666653
No 173
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=61.39 E-value=2.2e+02 Score=30.12 Aligned_cols=49 Identities=10% Similarity=0.169 Sum_probs=30.7
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeCC----CChhHHHHHHHHHHHhhhcCCeEEEe
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDDS----DDPTAQTLIKEEVLKWQEAGANIVYR 287 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDDs----sdd~t~~li~~~~~~~~~~~v~ii~~ 287 (352)
+.+.+.+....++ +. +.++.|.. =|.+..+..++..+++.++|.++...
T Consensus 460 ~~~~~~i~~~~~~--~~---~~~il~~~~v~~iD~ta~~al~~~~~~~~~~g~~~~i~ 512 (554)
T COG0659 460 DRLERALLGLIEE--RP---ERVILDLKSVPYIDASAAEALEDLIKELERRGIQLLIV 512 (554)
T ss_pred HHHHHHHHHHHhc--cC---CEEEEEcccCCcCChhHHHHHHHHHHHHHHcCCEEEEe
Confidence 5666666666654 22 23455543 24455667777888888888887655
No 174
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.
Probab=60.24 E-value=90 Score=28.92 Aligned_cols=104 Identities=14% Similarity=0.130 Sum_probs=58.4
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH------HHHHhh-----------hcCCeEEEee
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE------EVLKWQ-----------EAGANIVYRH 288 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~------~~~~~~-----------~~~v~ii~~~ 288 (352)
++|..+. ..+..++.++.+.... ++ +|+-....+.+.+.... ...+.. ..+.++.+..
T Consensus 25 llpv~gk-pli~~~l~~l~~~gi~--~i--~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 99 (267)
T cd02541 25 MLPIVDK-PVIQYIVEEAVAAGIE--DI--IIVTGRGKRAIEDHFDRSYELEETLEKKGKTDLLEEVRIISDLANIHYVR 99 (267)
T ss_pred eeEECCE-EHHHHHHHHHHHCCCC--EE--EEEeCCchHHHHHHhCCcHHHHHHHHhcccHHHhhhhhcccCCceEEEEE
Confidence 4566665 7999999999886433 23 33333222222222210 000000 0134555554
Q ss_pred ccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCCh-H-HHHHHHHHHhc
Q 018646 289 RILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNP-D-FLRRTVPHFKV 338 (352)
Q Consensus 289 r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~p-d-~L~~lv~~f~~ 338 (352)
.....| -++++..++.+. +.+-++++.+|..... + .+++++..+..
T Consensus 100 ~~~~~G-t~~al~~~~~~i---~~~~~lv~~gD~~~~~~~~~~~~l~~~~~~ 147 (267)
T cd02541 100 QKEPLG-LGHAVLCAKPFI---GDEPFAVLLGDDLIDSKEPCLKQLIEAYEK 147 (267)
T ss_pred cCCCCC-hHHHHHHHHHHh---CCCceEEEECCeEEeCCchHHHHHHHHHHH
Confidence 444455 788998888862 3355777788887654 2 68888887754
No 175
>COG1861 SpsF Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog [Cell envelope biogenesis, outer membrane]
Probab=59.57 E-value=1e+02 Score=28.92 Aligned_cols=97 Identities=15% Similarity=0.216 Sum_probs=63.8
Q ss_pred EEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHH
Q 018646 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 225 ViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al 304 (352)
++.|.-.++ .+..+|+.+....+-. ++.|--.|+-.|+...+.+. ..|+.+. .|.-..-+..-.
T Consensus 21 vLlpL~~~p-mI~~~lervrks~~~d-~ivvATS~~~~d~~l~~~~~-------~~G~~vf-------rGs~~dVL~Rf~ 84 (241)
T COG1861 21 VLLPLGGEP-MIEYQLERVRKSKDLD-KIVVATSDKEEDDALEEVCR-------SHGFYVF-------RGSEEDVLQRFI 84 (241)
T ss_pred hhhhcCCCc-hHHHHHHHHhcccccc-ceEEEecCCcchhHHHHHHH-------HcCeeEe-------cCCHHHHHHHHH
Confidence 345555554 7788888888876643 44444555566666666665 6677655 354455555533
Q ss_pred hccCCCCccEEEEEcCCC-CCChHHHHHHHHHHh
Q 018646 305 NCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFK 337 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~ 337 (352)
.....-.++.|+-+-+|+ .++|+.+..++..+-
T Consensus 85 ~a~~a~~~~~VVRvTGD~P~~dp~l~d~~v~~~l 118 (241)
T COG1861 85 IAIKAYSADVVVRVTGDNPFLDPELVDAAVDRHL 118 (241)
T ss_pred HHHHhcCCCeEEEeeCCCCCCCHHHHHHHHHHHH
Confidence 322245678999999999 579999999988654
No 176
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=59.07 E-value=47 Score=31.00 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=57.9
Q ss_pred EEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHH
Q 018646 224 LVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 224 sViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
.|||+-+||+ . |..+.++ .|. +.-.|+|-.+.+..+++++..++.||..++ . + +|.| - ...
T Consensus 31 ~VIi~gR~e~-~----L~e~~~~-~p~--~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv--l-i---NNAG-I----qr~ 91 (245)
T COG3967 31 TVIICGRNEE-R----LAEAKAE-NPE--IHTEVCDVADRDSRRELVEWLKKEYPNLNV--L-I---NNAG-I----QRN 91 (245)
T ss_pred EEEEecCcHH-H----HHHHHhc-Ccc--hheeeecccchhhHHHHHHHHHhhCCchhe--e-e---eccc-c----cch
Confidence 7899999985 3 3334433 565 555788888899999999888888875543 2 1 2223 1 111
Q ss_pred HhccCCCCccEEE----EEcCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 018646 304 MNCSYVKDYEFVA----IFDADFQPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 304 l~~~~~a~gd~V~----~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
... ....|.+- -++-...-+-.....+++||...|+-.+++
T Consensus 92 ~dl--t~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IIn 136 (245)
T COG3967 92 EDL--TGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIIN 136 (245)
T ss_pred hhc--cCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEE
Confidence 110 00111111 111222334445667889998888876665
No 177
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=57.58 E-value=1.4e+02 Score=30.07 Aligned_cols=92 Identities=16% Similarity=0.204 Sum_probs=53.7
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+.+...- ++ |+|+-+..+.. ..+.... ... .+.++ ....+ ....+..|++. .
T Consensus 31 ~GkPll~~tl~~l~~~~~i-~~--IvVVv~~~~~~---~~~~~~~---~~~-~v~~v--~gG~~-r~~SV~~gL~~---l 94 (378)
T PRK09382 31 GGKPLWLHVLENLSSAPAF-KE--IVVVIHPDDIA---YMKKALP---EIK-FVTLV--TGGAT-RQESVRNALEA---L 94 (378)
T ss_pred CCeeHHHHHHHHHhcCCCC-Ce--EEEEeChHHHH---HHHHhcc---cCC-eEEEe--CCCch-HHHHHHHHHHh---c
Confidence 4456899999998875321 12 33333322221 2221111 111 12222 12222 56778888885 2
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhc
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKV 338 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~ 338 (352)
+.|+|++.|+|. .++++.+++++..+.+
T Consensus 95 ~~d~VLVhdadrPfv~~e~I~~li~~~~~ 123 (378)
T PRK09382 95 DSEYVLIHDAARPFVPKELIDRLIEALDK 123 (378)
T ss_pred CCCeEEEeeccccCCCHHHHHHHHHHhhc
Confidence 449999999997 5799999999998764
No 178
>PRK10122 GalU regulator GalF; Provisional
Probab=57.11 E-value=1.9e+02 Score=27.84 Aligned_cols=104 Identities=13% Similarity=0.177 Sum_probs=60.2
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH---------------HHH---HhhhcCCeEEEe
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE---------------EVL---KWQEAGANIVYR 287 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~---------------~~~---~~~~~~v~ii~~ 287 (352)
++|..+. ..++-.+.++.+..-. ++ +|+-....+.+.+.... ..+ .....++++.+.
T Consensus 28 llpi~gk-piI~~~l~~l~~~Gi~--~i--~iv~~~~~~~i~~~~~~~~~l~~~~~~~~k~~~l~~~~~~~~~~~~i~~~ 102 (297)
T PRK10122 28 MLPIVDK-PMIQYIVDEIVAAGIK--EI--VLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV 102 (297)
T ss_pred eeEECCE-EHHHHHHHHHHHCCCC--EE--EEEcCCChHHHHHHHhcchhHHHHHhhcchhhhHHhhhhccCCCceEEEe
Confidence 4666666 7999999999986533 33 33333222333222210 000 000134566666
Q ss_pred eccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChH-------HHHHHHHHHhc
Q 018646 288 HRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPD-------FLRRTVPHFKV 338 (352)
Q Consensus 288 ~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd-------~L~~lv~~f~~ 338 (352)
......| -++++..+.... .+.+++++. +|+..+++ .+.+++..+.+
T Consensus 103 ~q~~~lG-tg~al~~a~~~l--~~~~fvvi~-gD~l~~~~~~~~~~~dl~~li~~h~~ 156 (297)
T PRK10122 103 RQGQPLG-LGHSILCARPAI--GDNPFVVVL-PDVVIDDASADPLRYNLAAMIARFNE 156 (297)
T ss_pred ecCCcCc-hHHHHHHHHHHc--CCCCEEEEE-CCeeccCccccccchhHHHHHHHHHH
Confidence 5555556 899999888863 345777766 88877543 47788876653
No 179
>PF09837 DUF2064: Uncharacterized protein conserved in bacteria (DUF2064); InterPro: IPR018641 This entry contains proteins that have no known function. ; PDB: 3CGX_A.
Probab=56.10 E-value=87 Score=26.10 Aligned_cols=43 Identities=19% Similarity=0.319 Sum_probs=30.5
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
-+.-|++++++. ...++-|+++.+|+ .++++.|++....++++
T Consensus 45 LG~Rm~~a~~~~-~~g~~~vvliGsD~P~l~~~~l~~A~~~L~~~ 88 (122)
T PF09837_consen 45 LGERMANAFQQA-ARGYEPVVLIGSDCPDLTPDDLEQAFEALQRH 88 (122)
T ss_dssp HHHHHHHHHHHH-HTT-SEEEEE-SS-TT--HHHHHHHHHHTTT-
T ss_pred HHHHHHHHHHHH-HcCCCcEEEEcCCCCCCCHHHHHHHHHHhccC
Confidence 566677787764 45788999999999 58999999999999753
No 180
>COG2068 Uncharacterized MobA-related protein [General function prediction only]
Probab=54.42 E-value=1.8e+02 Score=26.76 Aligned_cols=96 Identities=16% Similarity=0.247 Sum_probs=61.1
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+-...+..+++.+++-.+.. |||+-..... +..++. ....++++++. .....| -+..+..|++... .
T Consensus 29 ~g~plv~~~~~~a~~a~~~~----vivV~g~~~~---~~~~a~---~~~~~~~~v~n-pd~~~G-ls~Sl~ag~~a~~-~ 95 (199)
T COG2068 29 DGKPLVRASAETALSAGLDR----VIVVTGHRVA---EAVEAL---LAQLGVTVVVN-PDYAQG-LSTSLKAGLRAAD-A 95 (199)
T ss_pred CCCcHHHHHHHHHHhcCCCe----EEEEeCcchh---hHHHhh---hccCCeEEEeC-cchhhh-HhHHHHHHHHhcc-c
Confidence 33457888888877644332 5666554411 111211 12455665533 233344 8888999998632 2
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
+++.++++=+|. .+.++.+.+++..|..+
T Consensus 96 ~~~~v~~~lgDmP~V~~~t~~rl~~~~~~~ 125 (199)
T COG2068 96 EGDGVVLMLGDMPQVTPATVRRLIAAFRAR 125 (199)
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHhcccc
Confidence 236999999999 48999999999999865
No 181
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=54.21 E-value=85 Score=31.44 Aligned_cols=103 Identities=19% Similarity=0.242 Sum_probs=57.3
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeec---cC------CCCch
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHR---IL------RDGYK 296 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r---~~------~~G~K 296 (352)
++|.-|....++-.|.++.+..... |+|+-....+.+.+.+. ..+...+....+... .. ..| -
T Consensus 30 llPv~gk~plI~~~L~~l~~~Gi~~----i~iv~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-t 101 (407)
T PRK00844 30 AVPFGGSYRLIDFVLSNLVNSGYLR----IYVLTQYKSHSLDRHIS---QTWRLSGLLGNYITPVPAQQRLGKRWYLG-S 101 (407)
T ss_pred ceeeCCcceEhHHHHHHHHHCCCCE----EEEEeccCHHHHHHHHH---hCcCccccCCCeEEECCcccCCCCCcccC-C
Confidence 4677776568889999998865443 44444444444444332 122211221122211 11 134 7
Q ss_pred HHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 297 a~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
++++..+.........|+++++.+|.+.+.++ .+++.+..
T Consensus 102 a~al~~a~~~i~~~~~~~~lv~~gD~v~~~dl-~~l~~~h~ 141 (407)
T PRK00844 102 ADAIYQSLNLIEDEDPDYVVVFGADHVYRMDP-RQMVDFHI 141 (407)
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCCEEEcCCH-HHHHHHHH
Confidence 88888877653122337899999999776554 55566444
No 182
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=53.75 E-value=1.9e+02 Score=28.74 Aligned_cols=91 Identities=12% Similarity=0.175 Sum_probs=48.6
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..+. ..+..+++.+.+. . +++.|++ ....+...+.++ +. ..++++.+.......| .++++..+ .
T Consensus 25 lpi~gk-Pli~~~i~~l~~~-~--~~i~Ivv--~~~~~~i~~~~~----~~-~~~v~~~~~~~~~~~g-t~~al~~~-~- 90 (430)
T PRK14359 25 HTICGK-PMLFYILKEAFAI-S--DDVHVVL--HHQKERIKEAVL----EY-FPGVIFHTQDLENYPG-TGGALMGI-E- 90 (430)
T ss_pred CEECCc-cHHHHHHHHHHHc-C--CcEEEEE--CCCHHHHHHHHH----hc-CCceEEEEecCccCCC-cHHHHhhc-c-
Confidence 455554 5788888888764 1 2333333 333333333332 11 1134444332222234 56666542 2
Q ss_pred cCCCCccEEEEEcCCC-CCChHHHHHHHH
Q 018646 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVP 334 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~-~~~pd~L~~lv~ 334 (352)
...|.++++++|. ...++.++++..
T Consensus 91 ---~~~d~vlv~~gD~p~~~~~~l~~l~~ 116 (430)
T PRK14359 91 ---PKHERVLILNGDMPLVEKDELEKLLE 116 (430)
T ss_pred ---cCCCeEEEEECCccCCCHHHHHHHHh
Confidence 2468899999998 457888877653
No 183
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=52.23 E-value=1.4e+02 Score=29.58 Aligned_cols=41 Identities=10% Similarity=0.231 Sum_probs=34.1
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
..+++..|+++ .+.++++++++|. .++++.+++++..+..+
T Consensus 80 ~~~si~~gl~~---~~~~~vlv~~~D~P~i~~~~i~~L~~~~~~~ 121 (366)
T PRK14489 80 PLSGILAGLEH---ADSEYLFVVACDTPFLPENLVKRLSKALAIE 121 (366)
T ss_pred hHHHHHHHHHh---cCCCcEEEeeCCcCCCCHHHHHHHHHHhhcc
Confidence 67788889985 4678999999997 57999999999987543
No 184
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=51.22 E-value=1.1e+02 Score=29.99 Aligned_cols=105 Identities=13% Similarity=0.103 Sum_probs=58.3
Q ss_pred CeEEEEEeccCCc--hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCC-----C
Q 018646 221 PMVLVQIPMCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR-----D 293 (352)
Q Consensus 221 P~VsViIPayNE~--~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~-----~ 293 (352)
..+.|+..+ |+. ..+.-+|.|++.-+ +...+.+.|++|+-+++..+.+++..+.++ ..+.+..+....- .
T Consensus 24 ~~i~Iv~~~-D~ny~~~~~vsi~Sil~nn-~~~~~~f~Il~~~is~e~~~~l~~l~~~~~-~~i~~~~id~~~~~~~~~~ 100 (334)
T PRK15171 24 NSLDIAYGI-DKNFLFGCGVSIASVLLNN-PDKSLVFHVFTDYISDADKQRFSALAKQYN-TRINIYLINCERLKSLPST 100 (334)
T ss_pred CceeEEEEC-cHhhHHHHHHHHHHHHHhC-CCCCEEEEEEeCCCCHHHHHHHHHHHHhcC-CeEEEEEeCHHHHhCCccc
Confidence 456665554 443 78888999998542 333578888888766666555555554442 2234333321100 0
Q ss_pred -C-chHHHHHHHHhccCCCCccEEEEEcCCCCCChHH
Q 018646 294 -G-YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDF 328 (352)
Q Consensus 294 -G-~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~ 328 (352)
. .++.=....+....+.+.|-|+.+|+|.++..|.
T Consensus 101 ~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl 137 (334)
T PRK15171 101 KNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSI 137 (334)
T ss_pred CcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCH
Confidence 0 1221112222222234689999999999886653
No 185
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=48.09 E-value=1.7e+02 Score=27.33 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=55.2
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeec-----cCCCCch-HHHHHH-HH
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHR-----ILRDGYK-AGNLKS-AM 304 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r-----~~~~G~K-a~aLn~-al 304 (352)
....+..++.|++..+ . ..+.+.|++|+-+++-.+.+++..+++. ..+.++.+.. ....... ..+... .+
T Consensus 12 y~~~~~v~l~Sll~nn-~-~~~~fyil~~~is~e~~~~l~~~~~~~~-~~i~~i~i~~~~~~~~~~~~~~~~~~y~rL~~ 88 (248)
T cd06432 12 YERFLRIMMLSVMKNT-K-SPVKFWFIKNFLSPQFKEFLPEMAKEYG-FEYELVTYKWPRWLHKQTEKQRIIWGYKILFL 88 (248)
T ss_pred HHHHHHHHHHHHHHcC-C-CCEEEEEEeCCCCHHHHHHHHHHHHHhC-CceEEEEecChhhhhcccccchhHHHHHHHHH
Confidence 3467888999998764 2 3588999998877766666666665543 2233333321 0011100 011111 12
Q ss_pred hccCCCCccEEEEEcCCCCCChHHHHHHH
Q 018646 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTV 333 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~~pd~L~~lv 333 (352)
....+.+.|-|+.+|+|.++..+ |.++.
T Consensus 89 ~~lLP~~vdkvLYLD~Dilv~~d-L~eL~ 116 (248)
T cd06432 89 DVLFPLNVDKVIFVDADQIVRTD-LKELM 116 (248)
T ss_pred HHhhhhccCEEEEEcCCceeccc-HHHHH
Confidence 21123467999999999988744 33443
No 186
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase. Built to distinquish between the highly similar genes galU and galF
Probab=47.14 E-value=2.3e+02 Score=25.97 Aligned_cols=104 Identities=12% Similarity=0.136 Sum_probs=56.8
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHH---------------HHHhh--hcCCeEEEee
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE---------------VLKWQ--EAGANIVYRH 288 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~---------------~~~~~--~~~v~ii~~~ 288 (352)
++|.-+. ..+.-++.++.+.... + |+|+-....+.+.+.+... ..... ....++.+..
T Consensus 25 llpi~g~-pli~~~l~~l~~~gi~--~--v~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 99 (260)
T TIGR01099 25 MLPIVDK-PLIQYVVEEAVEAGIE--D--ILIVTGRGKRAIEDHFDTSYELEHQLEKRGKEELLKEVRSISPLATIFYVR 99 (260)
T ss_pred eEEECCE-EHHHHHHHHHHhCCCC--E--EEEEeCCcHHHHHHHhcccHHHHHHHHhhhhHHHHHHhhhccccceEEEEe
Confidence 4666665 7889999998875433 2 4444433333333222100 00000 0123444443
Q ss_pred ccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChH--HHHHHHHHHhc
Q 018646 289 RILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPD--FLRRTVPHFKV 338 (352)
Q Consensus 289 r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd--~L~~lv~~f~~ 338 (352)
.....| -++++..+.... ..+-++++-+|.....+ .+.+++..+.+
T Consensus 100 ~~~~~G-~~~al~~~~~~~---~~~~~lv~~gD~~~~~~~~~~~~l~~~~~~ 147 (260)
T TIGR01099 100 QKEQKG-LGHAVLCAEPFV---GDEPFAVILGDDIVVSEEPALKQMIDLYEK 147 (260)
T ss_pred cCCCCC-HHHHHHHHHHhh---CCCCEEEEeccceecCCcHHHHHHHHHHHH
Confidence 333445 788888888752 23456777788776543 67888887754
No 187
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=46.22 E-value=89 Score=29.23 Aligned_cols=27 Identities=4% Similarity=0.186 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCc
Q 018646 99 FYSCIKLFLWLSVVLFAFELCAYFKGW 125 (352)
Q Consensus 99 ~~~~~~~~l~~~~~ll~~~~~~~~~~w 125 (352)
.++|..+|+++.+..++..+.-++-+|
T Consensus 151 ~~gi~aml~Vf~LF~lvmt~g~d~m~f 177 (230)
T PF03904_consen 151 YKGIGAMLFVFMLFALVMTIGSDFMDF 177 (230)
T ss_pred HHhHHHHHHHHHHHHHHHHhcccchhh
Confidence 466777777777777766666665555
No 188
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=45.99 E-value=1.8e+02 Score=28.61 Aligned_cols=104 Identities=16% Similarity=0.241 Sum_probs=55.6
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhh----hcCCeEE--EeeccCC---CCch
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ----EAGANIV--YRHRILR---DGYK 296 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~----~~~v~ii--~~~r~~~---~G~K 296 (352)
++|.-+....++-+|..+.+.... + |+|+-....+...+.+.+. .+|. ..++.+. +.....+ .| -
T Consensus 28 llpv~gk~pli~~~l~~l~~~Gi~--~--i~iv~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~G-t 101 (380)
T PRK05293 28 AVPFGGKYRIIDFTLSNCANSGID--T--VGVLTQYQPLELNNHIGIG-SPWDLDRINGGVTILPPYSESEGGKWYKG-T 101 (380)
T ss_pred eeeeCCceeehhHHHHHHHhCCCC--E--EEEEecCCHHHHHHHHhCC-CcccccCCCCCEEEeCCcccCCCCcccCC-c
Confidence 567777656899999998886443 2 4444343333333322210 1111 0112332 2222221 34 6
Q ss_pred HHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 018646 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (352)
Q Consensus 297 a~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f 336 (352)
++++..+.......+.|.++++.+|.+.+.++. +++..+
T Consensus 102 a~al~~a~~~l~~~~~~~~lV~~gD~l~~~d~~-~ll~~h 140 (380)
T PRK05293 102 AHAIYQNIDYIDQYDPEYVLILSGDHIYKMDYD-KMLDYH 140 (380)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCEEEcCCHH-HHHHHH
Confidence 788888777531122478999999998776655 455543
No 189
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=44.01 E-value=2.6e+02 Score=25.78 Aligned_cols=93 Identities=17% Similarity=0.223 Sum_probs=56.8
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+...++..+++.+.+...-. + .|+|+.++..+..++++. + ..+.++ . .+. -......+|++.. ..
T Consensus 26 ~Gkpvl~~tl~~f~~~~~i~-~-Ivvv~~~~~~~~~~~~~~----~---~~v~iv--~--GG~-tR~~SV~ngL~~l-~~ 90 (221)
T PF01128_consen 26 GGKPVLEYTLEAFLASPEID-E-IVVVVPPEDIDYVEELLS----K---KKVKIV--E--GGA-TRQESVYNGLKAL-AE 90 (221)
T ss_dssp TTEEHHHHHHHHHHTTTTES-E-EEEEESGGGHHHHHHHHH----H---TTEEEE--E----S-SHHHHHHHHHHCH-HC
T ss_pred CCeEeHHHHHHHHhcCCCCC-e-EEEEecchhHHHHHHhhc----C---CCEEEe--c--CCh-hHHHHHHHHHHHH-Hc
Confidence 44569999999998854333 3 244544444455555443 2 333332 2 111 2556677777753 23
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhc
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKV 338 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~ 338 (352)
+.|+|++-|+== .++++.+.+++...++
T Consensus 91 ~~d~VlIHDaaRPfv~~~~i~~~i~~~~~ 119 (221)
T PF01128_consen 91 DCDIVLIHDAARPFVSPELIDRVIEAARE 119 (221)
T ss_dssp TSSEEEEEETTSTT--HHHHHHHHHHHHH
T ss_pred CCCEEEEEccccCCCCHHHHHHHHHHHHh
Confidence 448999999876 5699999999999986
No 190
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=43.94 E-value=1.1e+02 Score=32.22 Aligned_cols=113 Identities=12% Similarity=0.104 Sum_probs=69.9
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCC-CChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDS-DDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDs-sdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka 297 (352)
.....+.+|-|||.-+.+...+...... |.- -+|+|+=+. ......+..+. ...+.+++.. . |.
T Consensus 441 ~~qgFTlim~TYdR~d~L~k~v~~ys~v--PsL-~kIlVVWNnq~k~PP~es~~~------~~~VPlr~r~-----q-ke 505 (691)
T KOG1022|consen 441 HSQGFTLIMLTYDRVDLLKKLVKHYSRV--PSL-KKILVVWNNQGKNPPPESLEP------DIAVPLRFRQ-----Q-KE 505 (691)
T ss_pred cccceeeeeehHHHHHHHHHHHHHHhhC--CCc-ceEEEEecCCCCCCChhhccc------cCCccEEEEe-----h-hh
Confidence 3456899999999878888888877664 542 234444332 11111112221 1223433321 2 56
Q ss_pred HHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCc--EEEEE
Q 018646 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKL--IGFFL 346 (352)
Q Consensus 298 ~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~--vg~Vq 346 (352)
..+|+-+.-.-.-+.+-|+-+|.|.+++-|-|.-.-.-.++.|+ ||++.
T Consensus 506 NsLnNRF~~~peieT~AVL~IDDDIim~~ddldFgf~VWrefPD~lVGF~p 556 (691)
T KOG1022|consen 506 NSLNNRFEPYPEIETEAVLEIDDDIIMPCDDLDFGFEVWREFPDRLVGFVP 556 (691)
T ss_pred hhhhcccccCcccccceeEEecCceeeecchhHHHHHHHHhCccceeccCc
Confidence 66776555333457899999999999988888888888887776 55543
No 191
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=43.00 E-value=24 Score=34.45 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=30.3
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
-.|.|+. .++.++|+++|.|.+|.+++-+.+......
T Consensus 118 LRNvAr~---~a~T~~v~~~DvD~~ps~~l~~~l~~~~~~ 154 (317)
T PF13896_consen 118 LRNVARS---GARTDYVFLLDVDFLPSPGLYEKLLRFARR 154 (317)
T ss_pred HHHHHHH---hcCcceEEEecceeeeCcchHHHHHHHhhh
Confidence 3466777 478999999999999999988888776653
No 192
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=42.11 E-value=19 Score=32.33 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=25.9
Q ss_pred eccCCc--hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHH
Q 018646 228 PMCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIK 271 (352)
Q Consensus 228 PayNE~--~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~ 271 (352)
-+.|+. ..+..++.|+..-.-....+.+++++|+.+++..+.++
T Consensus 4 ~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~ 49 (250)
T PF01501_consen 4 LACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLR 49 (250)
T ss_dssp EECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHh
Confidence 345554 66777888888755421347677777765555444444
No 193
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=37.46 E-value=94 Score=25.16 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=27.0
Q ss_pred hHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEe
Q 018646 235 VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYR 287 (352)
Q Consensus 235 vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~ 287 (352)
.=...|+.+++ +||..++ |+|-|+|..| . ++-.+..++++.. +..+++
T Consensus 50 ~K~~~i~~i~~-~fP~~kf-iLIGDsgq~D-p-eiY~~ia~~~P~~-i~ai~I 97 (100)
T PF09949_consen 50 HKRDNIERILR-DFPERKF-ILIGDSGQHD-P-EIYAEIARRFPGR-ILAIYI 97 (100)
T ss_pred HHHHHHHHHHH-HCCCCcE-EEEeeCCCcC-H-HHHHHHHHHCCCC-EEEEEE
Confidence 44455666664 6998554 5667776544 2 3334555666543 444555
No 194
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=37.39 E-value=64 Score=34.24 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=64.7
Q ss_pred eEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHH
Q 018646 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (352)
Q Consensus 222 ~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn 301 (352)
..+|++-+|..++++..+++.+-.+.|-+ + |+||=++..+...++ .|+..|+.+.+++...|. +|
T Consensus 650 QFTvVmLTYERe~VLm~sLeRL~gLPYLn-K--vvVVWNspk~P~ddl------~WPdigvPv~viR~~~Ns------LN 714 (907)
T KOG2264|consen 650 QFTVVMLTYEREAVLMGSLERLHGLPYLN-K--VVVVWNSPKDPPDDL------TWPDIGVPVEVIRVAENS------LN 714 (907)
T ss_pred eEEEEEEEehHHHHHHHHHHHhhCCcccc-e--EEEEeCCCCCChhcc------cCcCCCCceEEEEccccc------cc
Confidence 68999999999999999999999998886 4 566666655554433 267888888777544432 33
Q ss_pred HHHhccCCCCccEEEEEcCCCCCChHHH
Q 018646 302 SAMNCSYVKDYEFVAIFDADFQPNPDFL 329 (352)
Q Consensus 302 ~al~~~~~a~gd~V~~lDAD~~~~pd~L 329 (352)
+-+--....+.|-|+-+|.|.-+..|-+
T Consensus 715 NRFlPwd~IETEAvLS~DDDahLrhdEI 742 (907)
T KOG2264|consen 715 NRFLPWDRIETEAVLSLDDDAHLRHDEI 742 (907)
T ss_pred ccccCchhhhheeeeecccchhhhhhhe
Confidence 3211001246799999999987765544
No 195
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=37.03 E-value=2.6e+02 Score=25.16 Aligned_cols=90 Identities=14% Similarity=0.271 Sum_probs=63.5
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+.++..+ .+...+.++.+ -. -+|+|.-+-+.+.|++.++ ..++.++ +.++.| ...-++++++.
T Consensus 22 leV~Gkp-LI~~v~~al~~---~~--d~i~v~isp~tp~t~~~~~-------~~gv~vi---~tpG~G-Yv~Dl~~al~~ 84 (177)
T COG2266 22 LEVCGKP-LIDRVLEALRK---IV--DEIIVAISPHTPKTKEYLE-------SVGVKVI---ETPGEG-YVEDLRFALES 84 (177)
T ss_pred hhhCCcc-HHHHHHHHHHh---hc--CcEEEEeCCCCHhHHHHHH-------hcCceEE---EcCCCC-hHHHHHHHHHh
Confidence 3445554 55666666665 12 2367777888888888776 5567666 556666 66779999995
Q ss_pred cCCCCccEEEEEcCCCC-CChHHHHHHHHHHh
Q 018646 307 SYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFK 337 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~ 337 (352)
-+.=++++-+|.. +.|..+......+.
T Consensus 85 ----l~~P~lvvsaDLp~l~~~~i~~vi~~~~ 112 (177)
T COG2266 85 ----LGTPILVVSADLPFLNPSIIDSVIDAAA 112 (177)
T ss_pred ----cCCceEEEecccccCCHHHHHHHHHHHh
Confidence 2336778888984 69999999999987
No 196
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase. This enzyme, glucose-1-phosphate adenylyltransferase, is also called ADP-glucose pyrophosphorylase. The plant form is an alpha2,beta2 heterodimer, allosterically regulated in plants. Both subunits are homologous and included in this model. In bacteria, both homomeric forms of GlgC and more active heterodimers of GlgC and GlgD have been described. This model describes the GlgC subunit only. This enzyme appears in variants of glycogen synthesis pathways that use ADP-glucose, rather than UDP-glucose as in animals.
Probab=37.01 E-value=1.5e+02 Score=28.76 Aligned_cols=103 Identities=16% Similarity=0.189 Sum_probs=53.5
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcC---CeEEEee------ccC-CCCc
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAG---ANIVYRH------RIL-RDGY 295 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~---v~ii~~~------r~~-~~G~ 295 (352)
++|..+....++..+.++.+.... + |+|+-....+...+.+. +.+.... ..+.+.. .+. ..|
T Consensus 23 llpv~g~~pli~~~l~~l~~~gi~--~--i~iv~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G- 94 (361)
T TIGR02091 23 AVPFGGKYRIIDFPLSNCINSGIR--R--IGVLTQYKSHSLNRHIQ---RGWDFDGFIDGFVTLLPAQQRESGTDWYQG- 94 (361)
T ss_pred cceecceeeEeeehhhhhhhcCCc--e--EEEEeccChHHHHHHHH---hccCccCccCCCEEEeCCcccCCCCccccC-
Confidence 356566545777888888876433 2 44443333334433332 1221111 1122211 111 124
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
.++++..++......+.+.++++.+|.+.+.+ +.+++..+.
T Consensus 95 t~~al~~a~~~~~~~~~~~~lv~~gD~l~~~~-l~~~l~~~~ 135 (361)
T TIGR02091 95 TADAVYQNLDLIEDYDPEYVLILSGDHIYKMD-YEKMLDYHI 135 (361)
T ss_pred cHHHHHHHHHHHHhcCCCEEEEecCCEEEcCC-HHHHHHHHH
Confidence 67888877765312335778999999987666 455555544
No 197
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism]
Probab=36.36 E-value=3.2e+02 Score=24.57 Aligned_cols=90 Identities=17% Similarity=0.245 Sum_probs=59.5
Q ss_pred cCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCC
Q 018646 230 CNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV 309 (352)
Q Consensus 230 yNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~ 309 (352)
.|....++..++.+..|. . .++|+-+.+.+. .. ..++.++.- .....| --.++-.|+++
T Consensus 26 ~~g~~lie~v~~~L~~~~----~-~vvi~~~~~~~~----~~-------~~g~~vv~D-~~~~~G-PL~Gi~~al~~--- 84 (192)
T COG0746 26 LNGRPLIEHVIDRLRPQV----D-VVVISANRNQGR----YA-------EFGLPVVPD-ELPGFG-PLAGILAALRH--- 84 (192)
T ss_pred eCCeEHHHHHHHHhcccC----C-EEEEeCCCchhh----hh-------ccCCceeec-CCCCCC-CHHHHHHHHHh---
Confidence 355567777788777763 2 234443333221 11 445555422 222224 67788999996
Q ss_pred CCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 310 KDYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 310 a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
..+++++++=+|+ .++++.+.++...+.+++
T Consensus 85 ~~~~~~~v~~~D~P~i~~~lv~~l~~~~~~~~ 116 (192)
T COG0746 85 FGTEWVLVLPCDMPFIPPELVERLLSAFKQTG 116 (192)
T ss_pred CCCCeEEEEecCCCCCCHHHHHHHHHhhcccC
Confidence 5689999999999 579999999999998655
No 198
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=34.61 E-value=4.5e+02 Score=26.51 Aligned_cols=104 Identities=14% Similarity=0.146 Sum_probs=58.2
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhh---c-CCeEEEee------ccC-CCC
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE---A-GANIVYRH------RIL-RDG 294 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~---~-~v~ii~~~------r~~-~~G 294 (352)
++|.-+.+..+.-.+..+.+..... |+|+-....+...+.+.+ .|.. . +..+.+.. .+. ..|
T Consensus 40 llpv~gkp~lI~~~l~~l~~~Gi~~----i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~i~i~~~~~~~~~e~~~lG 112 (425)
T PRK00725 40 AVYFGGKFRIIDFALSNCINSGIRR----IGVLTQYKAHSLIRHIQR---GWSFFREELGEFVDLLPAQQRVDEENWYRG 112 (425)
T ss_pred eEEECCEEEEhHHHHHHHHHCCCCe----EEEEecCCHHHHHHHHHh---hhcccccCCCCeEEEeCCcccCCCCccccC
Confidence 5777777668889999998864432 444444444444433321 1211 1 11121111 011 134
Q ss_pred chHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 295 ~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
-++++..+.......+.|.++++.+|++.+.+ +.+++....+
T Consensus 113 -Ta~al~~a~~~l~~~~~d~~lVl~gD~l~~~d-l~~ll~~h~~ 154 (425)
T PRK00725 113 -TADAVYQNLDIIRRYDPKYVVILAGDHIYKMD-YSRMLADHVE 154 (425)
T ss_pred -cHHHHHHHHHHHHhcCCCEEEEecCCeEeccC-HHHHHHHHHH
Confidence 78888887765312235789999999976655 6677775543
No 199
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=33.98 E-value=3.5e+02 Score=24.32 Aligned_cols=85 Identities=8% Similarity=0.039 Sum_probs=52.3
Q ss_pred EEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHH
Q 018646 255 IQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVP 334 (352)
Q Consensus 255 IiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~ 334 (352)
||++-|++.-.-+ .++...+ +.+.+++-....+.+.-...-+-..+.+ ....++++++|.--....+-=++.+.
T Consensus 2 VIlvTDGD~~A~r-avE~aa~---~iGgRCIS~S~GNPT~lsG~elV~lIk~--a~~DPV~VMfDD~G~~g~G~GE~Al~ 75 (180)
T PF14097_consen 2 VILVTDGDEYAKR-AVEIAAK---NIGGRCISQSAGNPTPLSGEELVELIKQ--APHDPVLVMFDDKGFIGEGPGEQALE 75 (180)
T ss_pred EEEEECChHHHHH-HHHHHHH---HhCcEEEeccCCCCCcCCHHHHHHHHHh--CCCCCEEEEEeCCCCCCCCccHHHHH
Confidence 5666676544332 2322221 5677777554333333234455666664 34557778888777888888888999
Q ss_pred HHhcCCcEEEE
Q 018646 335 HFKVTKLIGFF 345 (352)
Q Consensus 335 ~f~~dp~vg~V 345 (352)
+...+|++-++
T Consensus 76 ~v~~h~~IeVL 86 (180)
T PF14097_consen 76 YVANHPDIEVL 86 (180)
T ss_pred HHHcCCCceEE
Confidence 99888986543
No 200
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal.
Probab=31.21 E-value=3.6e+02 Score=27.71 Aligned_cols=99 Identities=12% Similarity=0.183 Sum_probs=48.9
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..+....++.++..+.... +. .+ ++|+.+... ..+++....+.....+++ ..+...| .++++..+..+
T Consensus 27 l~l~g~~~ll~~tl~~l~~~~-~~-~i-viv~~~~~~----~~~~~~l~~~~~~~~~~i--~Ep~~~g-Ta~ai~~aa~~ 96 (468)
T TIGR01479 27 LALVGDLTMLQQTLKRLAGLP-CS-SP-LVICNEEHR----FIVAEQLREIGKLASNII--LEPVGRN-TAPAIALAALL 96 (468)
T ss_pred eEcCCCCcHHHHHHHHHhcCC-Cc-Cc-EEecCHHHH----HHHHHHHHHcCCCcceEE--ecccccC-chHHHHHHHHH
Confidence 455566678999999988874 32 22 233322111 122222222210111232 2333334 55555543332
Q ss_pred cCC--CCccEEEEEcCCCCC-ChHHHHHHHHH
Q 018646 307 SYV--KDYEFVAIFDADFQP-NPDFLRRTVPH 335 (352)
Q Consensus 307 ~~~--a~gd~V~~lDAD~~~-~pd~L~~lv~~ 335 (352)
... ...++++++-+|+.. +++.+.+++..
T Consensus 97 ~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l~~ 128 (468)
T TIGR01479 97 AARRNGEDPLLLVLAADHVITDEDAFQAAVKL 128 (468)
T ss_pred HHHHHCCCcEEEEecCceeecCHHHHHHHHHH
Confidence 101 235789999999765 44556666554
No 201
>PF15102 TMEM154: TMEM154 protein family
Probab=30.66 E-value=37 Score=29.59 Aligned_cols=15 Identities=20% Similarity=0.279 Sum_probs=11.5
Q ss_pred CCCeEEEEEeccCCc
Q 018646 219 FFPMVLVQIPMCNEK 233 (352)
Q Consensus 219 ~~P~VsViIPayNE~ 233 (352)
.+..-.|.+|.|-|+
T Consensus 104 e~~~Env~~PiFEed 118 (146)
T PF15102_consen 104 ELGSENVKVPIFEED 118 (146)
T ss_pred ccCcccccccccccC
Confidence 456678889988886
No 202
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=30.37 E-value=1.3e+02 Score=30.20 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=43.3
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE 272 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~ 272 (352)
.+.+-|+|-++|..+.++..|+||.+...=. +..+|+.-|.-++++.++++.
T Consensus 30 ~~~~vivvqVH~r~~yl~~li~sL~~~~~I~-~~llifSHd~~~~ein~~v~~ 81 (356)
T PF05060_consen 30 NDSIVIVVQVHNRPEYLKLLIDSLSQARGIE-EALLIFSHDFYSEEINDLVQS 81 (356)
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHHHhhCcc-ceEEEEeccCChHHHHHHHHh
Confidence 3678999999999999999999999876554 456788889989998888864
No 203
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=29.25 E-value=5.9e+02 Score=25.41 Aligned_cols=117 Identities=13% Similarity=0.144 Sum_probs=57.8
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCCh--hHHHH-HHHHHHHhhhcCCeEEEeecc--CCCCc
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDP--TAQTL-IKEEVLKWQEAGANIVYRHRI--LRDGY 295 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd--~t~~l-i~~~~~~~~~~~v~ii~~~r~--~~~G~ 295 (352)
.+|-=.+...||-+.++--+..+... - |.+ +||+...+- ....+ .....+.+....-+++++.-. ...|.
T Consensus 79 RrV~D~~~f~~ElDlLeiRl~eL~~v--V-D~F--VIvEs~~Tf~G~~KpL~f~~~~~~f~~~~~KIiy~~l~~~~~~g~ 153 (356)
T PF04724_consen 79 RRVYDCFLFNNELDLLEIRLNELYDV--V-DYF--VIVESNRTFTGKPKPLYFAENKERFAFFHDKIIYVTLDDPPEKGR 153 (356)
T ss_pred CeEEEEEEeCChHHHHHHHHHHhhCc--c-eEE--EEEEECCCcCCCCCCccHHHHHHHHHhhhcceEEEEecCcCCCCC
Confidence 45655666678888888777776642 2 232 445532211 11110 111111222222234443322 12221
Q ss_pred ---------hHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEE
Q 018646 296 ---------KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIG 343 (352)
Q Consensus 296 ---------Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg 343 (352)
...+++.........++|+|++-|.|.+|.|+.|+.+ ......|..-
T Consensus 154 ~~~w~~E~~qR~~l~~l~~~~~~~~dDliivSDvDEIP~p~~l~~L-r~cd~~p~~l 209 (356)
T PF04724_consen 154 KDPWDRENYQRNALNGLLRLAGIQDDDLIIVSDVDEIPSPETLKFL-RWCDGFPEPL 209 (356)
T ss_pred CchhHHHHHHHHHHHHHhhhcCCCCCCEEEEcCcccccCHHHHHHH-HhcCCCCCee
Confidence 2223322222223468899999999999999999766 3333334433
No 204
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=28.49 E-value=3.4e+02 Score=27.39 Aligned_cols=104 Identities=16% Similarity=0.179 Sum_probs=56.6
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhh--hc--C-CeEEEeecc-CC----CCc
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ--EA--G-ANIVYRHRI-LR----DGY 295 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~--~~--~-v~ii~~~r~-~~----~G~ 295 (352)
++|..|....++-+|..+.+.... + |+|+-....+...+.+++ .+. .. + +.+.+.... .+ .|
T Consensus 28 Llpi~gk~plI~~~L~~l~~~Gi~--~--vivv~~~~~~~i~~~l~~---~~~~~~~~~g~~~i~~~~~~~~~~~~~lG- 99 (429)
T PRK02862 28 AVPLAGKYRLIDIPISNCINSGIN--K--IYVLTQFNSASLNRHISQ---TYNFDGFSGGFVEVLAAQQTPENPSWFQG- 99 (429)
T ss_pred eeEECCeeEEeHHHHHHHHHCCCC--E--EEEEecCCHHHHHHHHhc---CcCccccCCCEEEEeCCcccCCCCccccC-
Confidence 577777756888888888875433 2 444444344444443331 111 00 1 112211111 11 34
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
.++++..+.......+.+.++++.+|.+.+. -+++++.++.+
T Consensus 100 Ta~al~~a~~~l~~~~~~~~lVl~gD~l~~~-dl~~ll~~h~~ 141 (429)
T PRK02862 100 TADAVRKYLWHFQEWDVDEYLILSGDQLYRM-DYRLFVQHHRE 141 (429)
T ss_pred cHHHHHHHHHHHHhcCCCEEEEecCCEEEeC-CHHHHHHHHHH
Confidence 7888888876531223467899999997654 45666766543
No 205
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]
Probab=28.36 E-value=6.8e+02 Score=25.89 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=64.4
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
++|+| +=|.... ..++..|+++....-. + ++++-...-+..++.+. + ..++. +.......| -++
T Consensus 19 ~lPKV--LH~vaGk-pMl~hVi~~a~~l~~~--~--i~vVvGh~ae~V~~~~~----~--~~~v~--~v~Q~eqlG-TgH 82 (460)
T COG1207 19 DLPKV--LHPVAGK-PMLEHVIDAARALGPD--D--IVVVVGHGAEQVREALA----E--RDDVE--FVLQEEQLG-TGH 82 (460)
T ss_pred CCccc--chhccCc-cHHHHHHHHHhhcCcc--e--EEEEEcCCHHHHHHHhc----c--ccCce--EEEecccCC-hHH
Confidence 56765 3344444 4777888888876532 3 33333433333333222 1 11244 334455556 889
Q ss_pred HHHHHHhccCCCCcc-EEEEEcCCC-CCChHHHHHHHHHHhcC-CcEEEEE
Q 018646 299 NLKSAMNCSYVKDYE-FVAIFDADF-QPNPDFLRRTVPHFKVT-KLIGFFL 346 (352)
Q Consensus 299 aLn~al~~~~~a~gd-~V~~lDAD~-~~~pd~L~~lv~~f~~d-p~vg~Vq 346 (352)
|+..|+.+. ..+++ .++++-+|+ ...++.|++++..-... -++.+++
T Consensus 83 AV~~a~~~l-~~~~~g~vLVl~GD~PLit~~TL~~L~~~~~~~~~~~tvLt 132 (460)
T COG1207 83 AVLQALPAL-ADDYDGDVLVLYGDVPLITAETLEELLAAHPAHGAAATVLT 132 (460)
T ss_pred HHHhhhhhh-hcCCCCcEEEEeCCcccCCHHHHHHHHHhhhhcCCceEEEE
Confidence 999988863 13344 788888998 56999999888766432 3444444
No 206
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=28.19 E-value=5.7e+02 Score=24.96 Aligned_cols=119 Identities=7% Similarity=-0.042 Sum_probs=57.9
Q ss_pred eEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEE-eCCCChhHHHHHHHHHHHhh-hcCCeEEEeeccCCC--Cc--
Q 018646 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVL-DDSDDPTAQTLIKEEVLKWQ-EAGANIVYRHRILRD--GY-- 295 (352)
Q Consensus 222 ~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVv-DDssdd~t~~li~~~~~~~~-~~~v~ii~~~r~~~~--G~-- 295 (352)
++.|+.+-.| -+.+..+|.|++..+. ..+.+.|+ ||..+++..+..+++...+. ..+.++..+.-+... +.
T Consensus 2 ~~~vv~~g~~-~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~ 78 (304)
T cd06430 2 HLAVVACGER-LEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKK 78 (304)
T ss_pred EEEEEEcCCc-HHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhh
Confidence 3455555555 3666777888765442 24666544 44577777666665533221 112243333222111 10
Q ss_pred --hHHH-HHHHHhccCCCCccEEEEEcCCCCCChH--HHHHHHHHHhcCCcEEEE
Q 018646 296 --KAGN-LKSAMNCSYVKDYEFVAIFDADFQPNPD--FLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 296 --Ka~a-Ln~al~~~~~a~gd~V~~lDAD~~~~pd--~L~~lv~~f~~dp~vg~V 345 (352)
|..+ ....+....+ +.|-|+.+|+|.+...+ -|-++..-|.+ ..++++
T Consensus 79 l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~-~~~aA~ 131 (304)
T cd06430 79 LFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNS-TQLAAM 131 (304)
T ss_pred cccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCC-CeEEEE
Confidence 1011 1112222223 67999999999987554 33333333432 334444
No 207
>PHA02688 ORF059 IMV protein VP55; Provisional
Probab=28.05 E-value=1.1e+02 Score=30.14 Aligned_cols=41 Identities=17% Similarity=0.285 Sum_probs=34.7
Q ss_pred CCccEEEEEcCCCCC-ChHHHHHHHHHHhcCCcEEEEEecccc
Q 018646 310 KDYEFVAIFDADFQP-NPDFLRRTVPHFKVTKLIGFFLFESLM 351 (352)
Q Consensus 310 a~gd~V~~lDAD~~~-~pd~L~~lv~~f~~dp~vg~Vqtr~~~ 351 (352)
.+.+|+++++.|+.+ ++..+..++..|++ .++.++|-++.+
T Consensus 115 ~~~~yivVlEDDnTi~~~~~~~~~I~~M~~-n~idilQLre~~ 156 (323)
T PHA02688 115 KEDEYIVVVEDDNTLRDITTLHPIIKAMKE-KNIDILQLRETL 156 (323)
T ss_pred cCCCeEEEEcCCCcccccHHHHHHHHHHHh-cCeEEEEeehhh
Confidence 568999999999976 67788999999996 679999988654
No 208
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.98 E-value=2.3e+02 Score=23.63 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhccCcccc
Q 018646 97 RFFYSCIKLFLWLSVVLFAFELCAYFKGWHFA 128 (352)
Q Consensus 97 r~~~~~~~~~l~~~~~ll~~~~~~~~~~w~~~ 128 (352)
|+.--||...++-+++-.+..-.++.+.|-++
T Consensus 47 klssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 47 KLSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 54566777777777777777777778888655
No 209
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=27.92 E-value=1.5e+02 Score=29.57 Aligned_cols=77 Identities=17% Similarity=0.216 Sum_probs=45.5
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHH---c-CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCc
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVC---N-LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~---~-qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~ 295 (352)
.-+|.||||-+|.++.+.-.+..+. + |.- .+-|+|++--.++.- .
T Consensus 150 r~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL---~y~iyVieQ~g~~~F---------------------------N- 198 (372)
T KOG3916|consen 150 RHKVAIIIPFRNREEHLRYLLHHLHPFLQRQRL---DYRIYVIEQAGNKPF---------------------------N- 198 (372)
T ss_pred cceeEEEeecccHHHHHHHHHHHhhHHHHhhhh---ceeEEEEEecCCCcc---------------------------c-
Confidence 4589999999999987777666543 2 211 244566654222211 1
Q ss_pred hHHHHHHHHhccC-CCCccEEEEEcCCCCCChH
Q 018646 296 KAGNLKSAMNCSY-VKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 296 Ka~aLn~al~~~~-~a~gd~V~~lDAD~~~~pd 327 (352)
++.=+|.|+.... ....|.++|-|-|..|..|
T Consensus 199 RakL~NVGf~eAlkd~~wdCfIFHDVDllPenD 231 (372)
T KOG3916|consen 199 RAKLLNVGFLEALKDYGWDCFIFHDVDLLPEND 231 (372)
T ss_pred HHHhhhhHHHHHHHhcCCCEEEEecccccccCC
Confidence 2222333322211 2567999999999998655
No 210
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=27.75 E-value=1.8e+02 Score=30.36 Aligned_cols=56 Identities=18% Similarity=0.254 Sum_probs=43.3
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEee
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRH 288 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~ 288 (352)
+|-+|.-..++...|....++. + ++.|+|||..+.-+-+.+++.+. ..|+++.|.+
T Consensus 362 viltyg~s~vV~~ill~A~~~~-k--~frVvVVDSRP~~EG~~~lr~Lv----~~GinctYv~ 417 (556)
T KOG1467|consen 362 VLLTYGSSSVVNMILLEAKELG-K--KFRVVVVDSRPNLEGRKLLRRLV----DRGINCTYVL 417 (556)
T ss_pred EEEEecchHHHHHHHHHHHHhC-c--ceEEEEEeCCCCcchHHHHHHHH----HcCCCeEEEE
Confidence 3667888889988888877663 3 48899999988777777777665 6788888774
No 211
>PF15609 PRTase_2: Phosphoribosyl transferase
Probab=27.60 E-value=2.7e+02 Score=25.35 Aligned_cols=65 Identities=15% Similarity=0.098 Sum_probs=36.3
Q ss_pred EEEEEeC--CCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCccEEEEEcC
Q 018646 254 LIQVLDD--SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDA 320 (352)
Q Consensus 254 eIiVvDD--ssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDA 320 (352)
.+++||| ++..+...+++++.+.++.... +...-.+..+.+..+....+..-....-++|..+.+
T Consensus 123 ~lVLVDDEiSTG~T~lnli~al~~~~p~~~y--vvasL~d~~~~~~~~~~~~~~~~lgi~i~~vsL~~G 189 (191)
T PF15609_consen 123 TLVLVDDEISTGNTFLNLIRALHAKYPRKRY--VVASLLDWRSEEDRARFEALAEELGIPIDVVSLLSG 189 (191)
T ss_pred CEEEEecCccchHHHHHHHHHHHHhCCCceE--EEEEEeeCCCHHHHHHHHHHHHHcCCcEEEEEeecc
Confidence 4788898 6677777888888888874433 333334444423322222222212345677766654
No 212
>PHA01631 hypothetical protein
Probab=26.17 E-value=50 Score=29.45 Aligned_cols=66 Identities=17% Similarity=0.166 Sum_probs=34.2
Q ss_pred eEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCc----hHHHHHHHHhccCCCCccEEEEEcCCCCCChH
Q 018646 253 ILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY----KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 253 leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~----Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd 327 (352)
+..++|||+=.+-++...+ ....++++. ..+... -|..|-..++....-+.|+++++|+|..+++-
T Consensus 18 ~D~V~VD~~~~~~~~c~~~-------~~~~~Ii~~--~t~~e~Rr~RIAk~Ll~Iln~~s~i~DDi~~iIDSDV~ipn~ 87 (176)
T PHA01631 18 FDYVVVDKTFNDMTECQIP-------KYQEKIIWI--MTNTEIRWLRIAKQLLTIVNFAKNIEDDIIAIIDSDLIIPNL 87 (176)
T ss_pred ccEEEEccccccccccccc-------ccCCceEEe--cccchhHHHHHHHHHHHHHHhhccCCccEEEEeccceEecCc
Confidence 5678889876654433222 123444433 222221 22233334332112567899999999976654
No 213
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity. N-terminal domain of eEIF-2B epsilon and gamma, subunits of eukaryotic translation initiators, is a subfamily of glycosyltranferase 2 and is predicted to have glycosyltranferase activity. eIF-2B is a guanine nucleotide-exchange factor which mediates the exchange of GDP (bound to initiation factor eIF2) for GTP, generating active eIF2.GTP complex. EIF2B is a complex multimeric protein consisting of five subunits named alpha, beta, gamma, delta and epsilon. Subunit epsilon shares sequence similarity with gamma subunit, and with a family of bifunctional nucleotide-binding enzymes such as ADP-glucose pyrophosphorylase, suggesting that epsilon subunit may play roles in nucleotide binding activity. In yeast, eIF2B gamma enhances the activity of eIF2B-epsilon leading to the idea that these subunits form the catalytic subcomplex.
Probab=26.12 E-value=4.8e+02 Score=23.34 Aligned_cols=97 Identities=8% Similarity=0.073 Sum_probs=50.7
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHH-Hh-hhcCCeEEEeeccCCCCchHHHHHHH
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVL-KW-QEAGANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~-~~-~~~~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
++|..|. ..+.-++..+.+.... + |+|+-....+...+.+..... .+ ...++.+.+.......| -+.++..+
T Consensus 25 llpv~g~-pli~~~l~~l~~~gi~--~--i~vv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~G-ta~~l~~~ 98 (216)
T cd02507 25 LLPVANV-PLIDYTLEWLEKAGVE--E--VFVVCCEHSQAIIEHLLKSKWSSLSSKMIVDVITSDLCESAG-DALRLRDI 98 (216)
T ss_pred cceECCE-EHHHHHHHHHHHCCCC--e--EEEEeCCcHHHHHHHHHhcccccccCCceEEEEEccCCCCCc-cHHHHHHH
Confidence 4566676 6888899988875433 2 333333333333222221100 00 01123444443333444 66777777
Q ss_pred HhccCCCCccEEEEEcCCCCCChHHHHHHH
Q 018646 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTV 333 (352)
Q Consensus 304 l~~~~~a~gd~V~~lDAD~~~~pd~L~~lv 333 (352)
... -+.+ ++++.+|.+.+.++- .++
T Consensus 99 ~~~---i~~d-flv~~gD~i~~~~l~-~~l 123 (216)
T cd02507 99 RGL---IRSD-FLLLSCDLVSNIPLS-ELL 123 (216)
T ss_pred hhc---CCCC-EEEEeCCEeecCCHH-HHH
Confidence 664 2444 678999998777644 444
No 214
>PLN03133 beta-1,3-galactosyltransferase; Provisional
Probab=25.93 E-value=7.5e+02 Score=26.85 Aligned_cols=110 Identities=6% Similarity=-0.035 Sum_probs=58.1
Q ss_pred CCeEEEEEeccCCc----hhHHHHHHHHHcCCCCCCeeE-EEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCC
Q 018646 220 FPMVLVQIPMCNEK----EVYQQSIAAVCNLDWPKSKIL-IQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (352)
Q Consensus 220 ~P~VsViIPayNE~----~vl~~tL~sl~~qdyP~~~le-IiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G 294 (352)
.+.+.|+|.+.-.. +.|++|-..-... ....+. ++++--+.++.+.+.++++.+.|.+. +...+...-.+.-
T Consensus 384 ~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~--~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDI-Iq~dF~DsY~NLT 460 (636)
T PLN03133 384 PLDLFIGVFSTANNFKRRMAVRRTWMQYDAV--RSGAVAVRFFVGLHKNQMVNEELWNEARTYGDI-QLMPFVDYYSLIT 460 (636)
T ss_pred ceEEEEEEeCCcccHHHHHHHHHhhcccccc--CCCceEEEEEEecCCcHHHHHHHHHHHHHcCCe-EEEeeechhhhhH
Confidence 44566666664322 5666665542211 111122 34554455566666666666655422 2222222222222
Q ss_pred chHHH-HHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHH
Q 018646 295 YKAGN-LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPH 335 (352)
Q Consensus 295 ~Ka~a-Ln~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~ 335 (352)
.|.-. +..+.. ..+.+||+-.|.|+.+..+-|-+.+..
T Consensus 461 lKtl~~~~wa~~---c~~akFilK~DDDvFVnv~~Ll~~L~~ 499 (636)
T PLN03133 461 WKTLAICIFGTE---VVSAKYVMKTDDDAFVRVDEVLASLKR 499 (636)
T ss_pred HHHHHHHHHHHh---CCCceEEEEcCCceEEcHHHHHHHHHh
Confidence 34422 233444 357899999999999988876666643
No 215
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=25.23 E-value=1e+02 Score=22.71 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=28.3
Q ss_pred cccccCcchhhHHhhhhhhhhhhhHHHHHHHHHHH
Q 018646 32 KTRNRNAKQLTWVLLLKAHKAAGCLTSIASAFFSL 66 (352)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (352)
++|.||..--.||||.-+==..|.+.+.+-+.|.-
T Consensus 1 ~r~k~~~~mtriVLLISfiIlfgRl~Y~~I~a~~h 35 (59)
T PF11119_consen 1 MRRKKNSRMTRIVLLISFIILFGRLIYSAIGAWVH 35 (59)
T ss_pred CCCcccchHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 35678888889999999999999888877766643
No 216
>PLN03181 glycosyltransferase; Provisional
Probab=25.23 E-value=3.6e+02 Score=27.75 Aligned_cols=62 Identities=19% Similarity=0.186 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHHhhhcCCeEEEeecc---CCCC--chHHHHHHHHhccCCCCccEEEEEcCCCCC-ChH
Q 018646 264 PTAQTLIKEEVLKWQEAGANIVYRHRI---LRDG--YKAGNLKSAMNCSYVKDYEFVAIFDADFQP-NPD 327 (352)
Q Consensus 264 d~t~~li~~~~~~~~~~~v~ii~~~r~---~~~G--~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~-~pd 327 (352)
.-...++++.+..+..+|..+.+..-. ...+ .|..++.++|.. ..+.+||..+|+|+++ +++
T Consensus 148 ~~LlriikNR~dYArrHGY~lf~~~a~Ld~~~p~~WaKipalRaAM~a--~PeAEWfWWLDsDALIMNp~ 215 (453)
T PLN03181 148 HLLLRFFKNKVDYCRIHGYDIFYNNALLHPKMNSYWAKLPVVRAAMLA--HPEAEWIWWVDSDAVFTDMD 215 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEeccccCccCchhhhHHHHHHHHHHH--CCCceEEEEecCCceeecCC
Confidence 334555555555555667666543211 1111 277788888875 4789999999999965 554
No 217
>COG0382 UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism]
Probab=24.95 E-value=6e+02 Score=24.07 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=27.7
Q ss_pred CcchhhHHhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 018646 37 NAKQLTWVLLLKAHKAAGCLTSIASAFFSLGSLV 70 (352)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (352)
+.+--++.-+++.||-.+|+..+..+.++...+.
T Consensus 7 ~~~~~~~~~l~r~~r~i~~l~~~~~~~~~~~~~~ 40 (289)
T COG0382 7 PNKLKALLKLLRLDRPIFNLLLLLPALLGLLLAA 40 (289)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 4455678889999999999999888888877764
No 218
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit. This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, TIGR02091) in a subset of bacteria that use GlgC for glycogen biosynthesis.
Probab=24.90 E-value=2.1e+02 Score=28.01 Aligned_cols=111 Identities=8% Similarity=0.095 Sum_probs=54.6
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCC-CChhHHHHHHHHHHHhhhcCCe-------EEEeeccCC--CCc
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDS-DDPTAQTLIKEEVLKWQEAGAN-------IVYRHRILR--DGY 295 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDs-sdd~t~~li~~~~~~~~~~~v~-------ii~~~r~~~--~G~ 295 (352)
++|.-|....++-.++.+.++... + |+|+-.. .++...+.+. +....+++ +.+...... +|
T Consensus 27 LlpV~gk~PlIe~~l~~L~~~Gi~--~--I~iv~~~~~~~~I~~~l~----~~~~~~~~~~~~~~~~~~~~e~~~l~tg- 97 (369)
T TIGR02092 27 SLPFGGRYRLIDFPLSNMVNAGIR--N--VFIFFKNKERQSLFDHLG----SGREWDLHRKRDGLFVFPYNDRDDLSEG- 97 (369)
T ss_pred ccccCCeeeEEEEEhhhhhccCCC--E--EEEEeCCCcHHHHHHHHh----CCCCCCcccccCcEEEEeccCCCCcccC-
Confidence 366667645777788888876433 2 4444343 2224433332 11111222 112222211 13
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHH-hcCCcEEEEE
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF-KVTKLIGFFL 346 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f-~~dp~vg~Vq 346 (352)
-+.++..+.+.....+.|.++++.+|.+.+.|+. +++..+ +.+..+.++.
T Consensus 98 ~~~a~~~a~~~l~~~~~~~~lvlnGD~l~~~dl~-~ll~~h~~~~a~~tl~~ 148 (369)
T TIGR02092 98 GKRYFSQNLEFLKRSTSEYTVVLNSHMVCNIDLK-AVLKYHEETGKDITVVY 148 (369)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEECCCEEEecCHH-HHHHHHHHcCCCEEEEE
Confidence 3445655555321123478999999998777755 455544 4334454443
No 219
>TIGR03501 gamma_C_targ gammaproteobacterial enzyme C-terminal transmembrane domain. This homology domain, largely restricted to a subset of the gamma proteobacteria that excludes the enterobacteria, is found at the extreme carboxyl-terminus of a diverse set of proteins, most of which are enzymes with conventional signal sequences and with hydrolytic activities: nucleases, proteases, agarases, etc. Species that have this domain at all typically have from two to fifteen proteins tagged with this domain at the C-terminus. The agarase AgaA from Vibro sp. strain JT0107 is secreted into the medium, while the same protein heterologously expressed in E. coli is retained in the cell fraction. This suggests cleavage and release in species with this domain. Both this suggestion, and the chemical structure of the domain (motif, hydrophobic predicted transmembrane helix, cluster of basic residues) closely parallels that of the LPXTG/sortase system and the PEP-CTERM/exosortase(EpsH) system.
Probab=23.85 E-value=1e+02 Score=18.87 Aligned_cols=21 Identities=33% Similarity=0.400 Sum_probs=14.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhh
Q 018646 54 GCLTSIASAFFSLGSLVRRRV 74 (352)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~ 74 (352)
|.+.|++-.+..++...|||.
T Consensus 3 GSlGwl~LllL~~~~~rRr~~ 23 (26)
T TIGR03501 3 GSLGWLSLLLLLLLGLRRRRX 23 (26)
T ss_pred chHHHHHHHHHHHHHHHHhhc
Confidence 788998887776665444443
No 220
>PF11181 YflT: Heat induced stress protein YflT
Probab=23.59 E-value=1.3e+02 Score=24.00 Aligned_cols=30 Identities=13% Similarity=0.230 Sum_probs=23.4
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEE
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQ 256 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIi 256 (352)
|=+|+-.+.+...|+.+.++.|..+.+.|+
T Consensus 3 Igv~~~~~E~~~~I~~L~~~Gy~~ddI~Vv 32 (103)
T PF11181_consen 3 IGVYDNEEEALSAIEELKAQGYSEDDIYVV 32 (103)
T ss_pred EEEECCHHHHHHHHHHHHHcCCCcccEEEE
Confidence 556777777889999999999998765333
No 221
>PF13768 VWA_3: von Willebrand factor type A domain
Probab=23.52 E-value=4.3e+02 Score=21.92 Aligned_cols=91 Identities=11% Similarity=-0.010 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHH----------HHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHH
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQT----------LIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~----------li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~a 303 (352)
+...+++..++++--|.+++.|+..++........ .+.++++. . . ....++. -..+++.+
T Consensus 18 ~~~k~al~~~l~~L~~~d~fnii~f~~~~~~~~~~~~~~~~~~~~~a~~~I~~-----~--~--~~~G~t~-l~~aL~~a 87 (155)
T PF13768_consen 18 ELVKDALRAILRSLPPGDRFNIIAFGSSVRPLFPGLVPATEENRQEALQWIKS-----L--E--ANSGGTD-LLAALRAA 87 (155)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEeCCEeeEcchhHHHHhHHHHHHHHHHHHH-----h--c--ccCCCcc-HHHHHHHH
Confidence 57778888888876678899999998864321111 11111111 0 0 0012222 55678887
Q ss_pred Hhcc--CCCCccEEEEEcCCCCCChHHHHHHHH
Q 018646 304 MNCS--YVKDYEFVAIFDADFQPNPDFLRRTVP 334 (352)
Q Consensus 304 l~~~--~~a~gd~V~~lDAD~~~~pd~L~~lv~ 334 (352)
+... ......++++.|+...-.++-+...+.
T Consensus 88 ~~~~~~~~~~~~IilltDG~~~~~~~~i~~~v~ 120 (155)
T PF13768_consen 88 LALLQRPGCVRAIILLTDGQPVSGEEEILDLVR 120 (155)
T ss_pred HHhcccCCCccEEEEEEeccCCCCHHHHHHHHH
Confidence 7741 113457888888886334433334443
No 222
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=22.84 E-value=1.2e+02 Score=28.19 Aligned_cols=48 Identities=23% Similarity=0.178 Sum_probs=27.2
Q ss_pred HHhhhcCCeEEEeeccC--CCC-----chHHHHHHHHhccCCCCccEEEEEcCCCCC
Q 018646 275 LKWQEAGANIVYRHRIL--RDG-----YKAGNLKSAMNCSYVKDYEFVAIFDADFQP 324 (352)
Q Consensus 275 ~~~~~~~v~ii~~~r~~--~~G-----~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~ 324 (352)
.....+|-.+.+..... ..+ .|..++..+|.. -.+++||+.+|+|.++
T Consensus 35 ~Ya~~HgY~~~~~~~~~~~~~~~~~~W~K~~~lr~~m~~--~P~~~wv~~lD~Dali 89 (239)
T PF05637_consen 35 DYARRHGYDLYYRNIQEYDDPERPGSWAKIPALRAAMKK--YPEAEWVWWLDSDALI 89 (239)
T ss_dssp HHHHHHT-EEEEE-S--S--SHHHHHHTHHHHHHHHHHH---TT-SEEEEE-TTEEE
T ss_pred HHHHhcCCEEEEEChHHcCCCCCChhhHHHHHHHHHHHh--CCCCCEEEEEcCCeEE
Confidence 33446677766532221 111 277788888874 3678999999999964
No 223
>PRK00576 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=22.83 E-value=4.9e+02 Score=22.35 Aligned_cols=44 Identities=5% Similarity=-0.016 Sum_probs=31.3
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
-..++..|++.....+.|+++++=+|. .++++.+++++..+...
T Consensus 59 pl~~~~~gl~~~~~~~~~~~lv~~~DmP~i~~~~i~~L~~~~~~~ 103 (178)
T PRK00576 59 PLPATGRGLRAAAEAGARLAFVCAVDMPYLTVELIDDLARPAAQT 103 (178)
T ss_pred cHHHHHHHHHHHHhcCCCEEEEEeCCCCCCCHHHHHHHHHHhhcC
Confidence 455555556532123579999999999 56999999999877543
No 224
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=22.07 E-value=5e+02 Score=26.61 Aligned_cols=59 Identities=19% Similarity=0.134 Sum_probs=38.3
Q ss_pred hhHHHHHHHHHHHhhhcCCeEEEee---ccCCCC--chHHHHHHHHhccCCCCccEEEEEcCCCCC
Q 018646 264 PTAQTLIKEEVLKWQEAGANIVYRH---RILRDG--YKAGNLKSAMNCSYVKDYEFVAIFDADFQP 324 (352)
Q Consensus 264 d~t~~li~~~~~~~~~~~v~ii~~~---r~~~~G--~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~ 324 (352)
.-....++..+..+..+|..+.+-. .....+ .|..++.++|.. ..+.|||.-+|+|.++
T Consensus 147 ~yLlks~kNK~dYAr~HGY~~fyn~~~ld~~~p~~WaKlpaLR~aM~~--~PeaEWiWWLDsDALI 210 (429)
T PLN03182 147 HYLLKSLKNKIDYCRLHGIEIFYNMAHLDAEMAGFWAKLPLLRKLMLA--HPEVEWIWWMDSDALF 210 (429)
T ss_pred HHHHHHHHHHHHHHHHhCCEEEeehhhcCcCCCcchhHHHHHHHHHHH--CCCceEEEEecCCcee
Confidence 3335555555555566777766532 111222 277888888874 3689999999999975
No 225
>KOG0991 consensus Replication factor C, subunit RFC2 [Replication, recombination and repair]
Probab=21.49 E-value=2.3e+02 Score=27.25 Aligned_cols=44 Identities=20% Similarity=0.305 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHcC--CCCCCeeEEEEEeC--CCChhHHHHHHHHHHHh
Q 018646 234 EVYQQSIAAVCNL--DWPKSKILIQVLDD--SDDPTAQTLIKEEVLKW 277 (352)
Q Consensus 234 ~vl~~tL~sl~~q--dyP~~~leIiVvDD--ssdd~t~~li~~~~~~~ 277 (352)
++++..|....++ +.|+.+..|+|+|. |-++..++..++-.+-|
T Consensus 93 DvVRn~IK~FAQ~kv~lp~grhKIiILDEADSMT~gAQQAlRRtMEiy 140 (333)
T KOG0991|consen 93 DVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTAGAQQALRRTMEIY 140 (333)
T ss_pred HHHHHHHHHHHHhhccCCCCceeEEEeeccchhhhHHHHHHHHHHHHH
Confidence 7899999998875 56777889999994 66666666666544433
No 226
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=20.69 E-value=6e+02 Score=22.52 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=44.5
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEE
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIV 285 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii 285 (352)
|.|.||+=....-++.++..+-+-...+| +|+-|+.-..+++ ...++.+.....|++++
T Consensus 3 ~~V~IIMGS~SD~~~mk~Aa~~L~~fgi~---ye~~VvSAHRTPe---~m~~ya~~a~~~g~~vi 61 (162)
T COG0041 3 PKVGIIMGSKSDWDTMKKAAEILEEFGVP---YEVRVVSAHRTPE---KMFEYAEEAEERGVKVI 61 (162)
T ss_pred ceEEEEecCcchHHHHHHHHHHHHHcCCC---eEEEEEeccCCHH---HHHHHHHHHHHCCCeEE
Confidence 47899998888889999999999888888 6777887765554 33455555567788766
No 227
>PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional
Probab=20.57 E-value=7.6e+02 Score=23.67 Aligned_cols=103 Identities=16% Similarity=0.206 Sum_probs=55.2
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhh-------------------hcCCeEEE
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ-------------------EAGANIVY 286 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~-------------------~~~v~ii~ 286 (352)
++|..+. ..+.-++.++.+...- + |+|+-....+...+..... ..+. ..+.++.+
T Consensus 33 l~pv~g~-pii~~~l~~l~~~gi~--~--i~vv~~~~~~~i~~~~~~~-~~~~~~l~~~~~~~~~~e~~~i~~~~~~i~~ 106 (302)
T PRK13389 33 MLPLVDK-PLIQYVVNECIAAGIT--E--IVLVTHSSKNSIENHFDTS-FELEAMLEKRVKRQLLDEVQSICPPHVTIMQ 106 (302)
T ss_pred eeEECCE-EHHHHHHHHHHHCCCC--E--EEEEeCCCHHHHHHHHccc-hhhhhhhhhhhhhHHHHhhhhccccCceEEE
Confidence 4666666 7999999999886422 3 3344333333333333210 0000 01234444
Q ss_pred eeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCC-------hHHHHHHHHHHhc
Q 018646 287 RHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN-------PDFLRRTVPHFKV 338 (352)
Q Consensus 287 ~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~-------pd~L~~lv~~f~~ 338 (352)
.......| -++++..+... ..+.+ ++++-+|...+ ...+.+++.++.+
T Consensus 107 ~~q~~~~G-tg~Av~~a~~~--~~~~~-~lVl~gD~~~~~~~~~~~~~dl~~l~~~h~~ 161 (302)
T PRK13389 107 VRQGLAKG-LGHAVLCAHPV--VGDEP-VAVILPDVILDEYESDLSQDNLAEMIRRFDE 161 (302)
T ss_pred eecCCCCC-hHHHHHHHHHH--cCCCC-EEEEeCcceecccccccccccHHHHHHHHHh
Confidence 43333334 78888887775 23334 55666888764 2567778876653
No 228
>PF14979 TMEM52: Transmembrane 52
Probab=20.43 E-value=4.2e+02 Score=23.23 Aligned_cols=31 Identities=6% Similarity=0.191 Sum_probs=24.0
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHcCCCCC
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPK 250 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~qdyP~ 250 (352)
++...+-|-+.+.+..+..|+.|+..-.||.
T Consensus 61 ~~P~~~TVia~D~DSt~hsTvTS~sSVq~P~ 91 (154)
T PF14979_consen 61 PQPYEVTVIAVDSDSTLHSTVTSYSSVQYPA 91 (154)
T ss_pred CCCceEEEEeccCCccccchhhhhhcccccc
Confidence 4455555556777789999999999888886
No 229
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=20.26 E-value=4.7e+02 Score=25.14 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=14.7
Q ss_pred CCccEEEEEcCCCCCCh
Q 018646 310 KDYEFVAIFDADFQPNP 326 (352)
Q Consensus 310 a~gd~V~~lDAD~~~~p 326 (352)
.++|-|+++|+|+++-.
T Consensus 90 ~~y~kvlyLDaD~l~~~ 106 (278)
T cd06914 90 TEYDRIIYFDSDSIIRH 106 (278)
T ss_pred cceeeEEEecCChhhhc
Confidence 68999999999998644
Done!