Query 018646
Match_columns 352
No_of_seqs 341 out of 2111
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 03:53:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 99.9 9.9E-24 3.4E-28 225.9 21.3 194 141-350 69-277 (802)
2 1qg8_A Protein (spore coat pol 99.8 5.8E-20 2E-24 167.9 12.2 118 221-349 1-126 (255)
3 3bcv_A Putative glycosyltransf 99.8 6.3E-19 2.2E-23 159.4 14.8 115 219-344 3-118 (240)
4 1xhb_A Polypeptide N-acetylgal 99.7 1.2E-17 4.1E-22 167.5 14.1 121 219-346 27-149 (472)
5 3ckj_A Putative uncharacterize 99.7 9.9E-18 3.4E-22 161.2 12.4 118 219-348 46-169 (329)
6 2d7i_A Polypeptide N-acetylgal 99.7 5.4E-17 1.8E-21 167.5 11.0 118 219-344 110-229 (570)
7 3f1y_A Mannosyl-3-phosphoglyce 99.7 6.9E-17 2.3E-21 159.6 11.1 117 220-348 93-217 (387)
8 2z86_A Chondroitin synthase; G 99.7 1.1E-16 3.9E-21 165.6 13.1 120 219-349 373-492 (625)
9 2z86_A Chondroitin synthase; G 99.7 2.5E-16 8.4E-21 163.1 14.1 123 219-350 91-213 (625)
10 2ffu_A Ppgalnact-2, polypeptid 99.7 1.5E-16 5.2E-21 161.0 10.6 116 219-346 64-180 (501)
11 3l7i_A Teichoic acid biosynthe 99.6 1E-16 3.6E-21 169.5 0.0 118 220-347 1-118 (729)
12 4fix_A UDP-galactofuranosyl tr 99.6 3.3E-15 1.1E-19 156.7 8.2 124 219-348 178-305 (657)
13 2bo4_A Mannosylglycerate synth 99.3 4.1E-12 1.4E-16 125.8 12.0 117 224-347 3-127 (397)
14 2nxv_A ATP synthase subunits r 99.3 4.2E-12 1.4E-16 117.2 10.7 97 219-347 14-114 (249)
15 2wvl_A Mannosyl-3-phosphoglyce 99.2 2.6E-10 8.9E-15 110.3 13.3 105 219-332 51-180 (391)
16 2fy7_A Beta-1,4-galactosyltran 99.1 1.7E-10 5.7E-15 109.5 6.9 77 219-328 63-146 (287)
17 1fo8_A Alpha-1,3-mannosyl-glyc 99.0 6E-10 2E-14 108.2 10.2 118 221-347 2-138 (343)
18 2zu9_A Mannosyl-3-phosphoglyce 98.9 4E-09 1.4E-13 103.8 10.0 106 221-337 51-185 (394)
19 1v84_A Galactosylgalactosylxyl 95.9 0.04 1.4E-06 50.8 10.2 103 220-333 2-128 (253)
20 3cu0_A Galactosylgalactosylxyl 95.8 0.094 3.2E-06 48.9 12.3 103 219-332 19-153 (281)
21 4fcu_A 3-deoxy-manno-octuloson 95.6 0.13 4.3E-06 47.2 12.3 100 233-347 26-129 (253)
22 2d0j_A Galactosylgalactosylxyl 95.5 0.1 3.6E-06 47.8 11.0 102 220-332 2-121 (246)
23 3tqd_A 3-deoxy-manno-octuloson 95.0 0.17 5.8E-06 46.4 11.1 93 234-341 35-128 (256)
24 3oam_A 3-deoxy-manno-octuloson 94.1 1.1 3.6E-05 40.5 14.1 104 228-347 23-128 (252)
25 3k8d_A 3-deoxy-manno-octuloson 92.9 1.4 4.7E-05 40.4 12.7 99 234-347 44-144 (264)
26 1qwj_A Cytidine monophospho-N- 91.8 5.5 0.00019 34.9 15.0 93 233-340 28-124 (229)
27 2y6p_A 3-deoxy-manno-octuloson 90.3 3.9 0.00013 35.6 12.4 95 232-346 26-121 (234)
28 2wee_A MOBA-related protein; u 89.7 2.3 7.9E-05 35.9 10.1 96 232-342 30-126 (197)
29 1h7e_A 3-deoxy-manno-octuloson 88.9 8.6 0.00029 33.6 13.6 92 231-339 25-117 (245)
30 2waw_A MOBA relate protein; un 88.3 3.4 0.00012 34.8 10.2 97 231-342 29-126 (199)
31 1vic_A 3-deoxy-manno-octuloson 87.6 6.9 0.00024 34.9 12.3 100 232-346 26-127 (262)
32 3q80_A 2-C-methyl-D-erythritol 86.0 7.5 0.00025 34.6 11.5 99 231-345 33-134 (231)
33 3f1c_A Putative 2-C-methyl-D-e 85.6 2.9 9.8E-05 37.3 8.5 99 232-340 31-134 (246)
34 1omz_A Alpha-1,4-N-acetylhexos 85.6 4 0.00014 38.2 9.7 109 220-341 27-136 (293)
35 3st8_A Bifunctional protein GL 85.3 6.4 0.00022 38.9 11.7 112 226-346 34-147 (501)
36 1ezi_A CMP-N-acetylneuraminic 85.1 5.3 0.00018 34.7 9.9 92 233-339 29-125 (228)
37 3juk_A UDP-glucose pyrophospho 85.1 0.89 3.1E-05 41.4 4.9 104 227-340 28-153 (281)
38 3ngw_A Molybdopterin-guanine d 84.6 6.9 0.00024 34.2 10.4 91 231-343 24-116 (208)
39 2qh5_A PMI, ALGA, mannose-6-ph 84.3 8.4 0.00029 35.5 11.3 95 227-335 31-128 (308)
40 4fce_A Bifunctional protein GL 84.2 5.4 0.00018 38.5 10.4 97 233-346 36-133 (459)
41 2vsh_A TARI, 2-C-methyl-D-eryt 84.0 4.8 0.00016 34.9 9.1 99 232-340 30-135 (236)
42 2v0h_A Bifunctional protein GL 82.7 10 0.00035 36.5 11.7 96 233-345 33-129 (456)
43 1vgw_A 4-diphosphocytidyl-2C-m 82.4 20 0.00067 30.9 12.5 97 231-340 32-133 (231)
44 2c0n_A A197; thermophil protei 82.2 2.1 7E-05 38.0 5.7 25 309-333 51-78 (203)
45 3d5n_A Q97W15_sulso; NESG, SSR 81.5 3.6 0.00012 35.3 7.1 86 231-336 26-112 (197)
46 3lw6_A FI08434P, beta-4-galact 81.0 3.9 0.00013 38.1 7.4 76 220-327 50-129 (287)
47 2ux8_A Glucose-1-phosphate uri 79.6 3 0.0001 38.2 6.3 105 227-340 40-162 (297)
48 2yc3_A 2-C-methyl-D-erythritol 78.7 8.7 0.0003 33.2 8.8 94 233-339 32-126 (228)
49 3pnn_A Conserved domain protei 78.1 11 0.00038 34.7 9.8 108 226-346 25-153 (303)
50 3rsb_A Adenosylcobinamide-phos 77.9 3.5 0.00012 34.9 5.8 93 232-338 26-119 (196)
51 2xwl_A 2-C-methyl-D-erythritol 77.2 17 0.00057 31.1 10.2 91 232-338 29-121 (223)
52 2e3d_A UTP--glucose-1-phosphat 75.6 6 0.00021 36.2 7.1 106 227-341 34-164 (302)
53 2pa4_A UTP-glucose-1-phosphate 75.5 6.4 0.00022 36.6 7.3 58 281-340 104-162 (323)
54 1i52_A 4-diphosphocytidyl-2-C- 75.0 14 0.00048 32.1 9.1 94 232-340 34-128 (236)
55 1e5k_A Molybdopterin-guanine d 72.1 16 0.00055 31.3 8.6 83 232-335 32-116 (201)
56 4ecm_A Glucose-1-phosphate thy 70.4 10 0.00035 34.0 7.2 101 233-346 55-157 (269)
57 1hm9_A GLMU, UDP-N-acetylgluco 65.7 13 0.00044 36.0 7.3 103 227-346 34-138 (468)
58 1lvw_A Glucose-1-phosphate thy 64.0 20 0.00069 32.9 7.9 98 227-337 29-127 (295)
59 1fxo_A Glucose-1-phosphate thy 62.4 15 0.00053 33.6 6.8 98 227-337 28-126 (293)
60 1w55_A ISPD/ISPF bifunctional 58.1 38 0.0013 32.4 8.9 87 232-339 30-117 (371)
61 3tzt_A Glycosyl transferase fa 54.1 71 0.0024 28.9 9.8 101 222-327 5-116 (276)
62 1mc3_A Glucose-1-phosphate thy 50.8 25 0.00087 32.2 6.2 98 227-337 29-127 (296)
63 1vpa_A 2-C-methyl-D-erythritol 49.6 56 0.0019 28.0 8.0 94 233-339 41-135 (234)
64 4evw_A Nucleoside-diphosphate- 43.9 42 0.0014 29.9 6.4 92 227-326 25-120 (255)
65 1yp2_A Glucose-1-phosphate ade 41.9 1.2E+02 0.0039 29.0 9.6 110 227-345 46-169 (451)
66 3cgx_A Putative nucleotide-dip 39.2 2E+02 0.0069 25.3 11.0 51 294-345 85-136 (242)
67 3brk_X Glucose-1-phosphate ade 38.6 86 0.003 29.7 8.1 110 227-345 38-159 (420)
68 1tzf_A Glucose-1-phosphate cyt 38.1 1.4E+02 0.005 25.6 9.0 42 293-338 106-147 (259)
69 2e8b_A Probable molybdopterin- 34.1 2.1E+02 0.007 23.9 9.5 78 234-333 41-120 (201)
70 1g9r_A Glycosyl transferase; a 31.8 76 0.0026 29.0 6.2 88 234-327 13-111 (311)
71 2xme_A CTP-inositol-1-phosphat 31.3 68 0.0023 27.5 5.5 85 233-334 45-130 (232)
72 2x65_A Mannose-1-phosphate gua 31.0 1.4E+02 0.0046 27.8 7.9 93 227-332 28-121 (336)
73 2dpw_A Hypothetical protein TT 29.4 1.5E+02 0.0051 25.4 7.5 87 232-346 31-118 (232)
74 1ll2_A Glycogenin-1; protein-s 29.3 1.9E+02 0.0067 26.8 8.7 90 229-327 10-110 (333)
75 2px7_A 2-C-methyl-D-erythritol 25.0 1.5E+02 0.005 25.6 6.6 41 296-339 93-134 (236)
76 3rht_A (gatase1)-like protein; 23.6 3.2E+02 0.011 24.5 8.7 39 310-348 49-88 (259)
77 4dik_A Flavoprotein; TM0755, e 22.6 4.5E+02 0.015 25.0 10.1 116 223-347 233-360 (410)
78 2p6w_A VP54, putative glycosyl 20.6 2.2E+02 0.0075 25.0 6.4 58 269-328 25-90 (213)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.91 E-value=9.9e-24 Score=225.95 Aligned_cols=194 Identities=25% Similarity=0.321 Sum_probs=137.3
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhcchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCccccCCCC
Q 018646 141 PLAIKGAFDLLYSSWVLVRVHYLAPPLQF--LANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKG 218 (352)
Q Consensus 141 ~l~~~~~~~~~y~~W~~~r~~~~~p~l~~--l~~~~i~l~l~~~~~~l~l~l~~f~i~~~r~rp~~~~~~~~~~~~~~~~ 218 (352)
+..+..+...+|++| |..+++|.... ...+.+.+++++.+..+...++.++...+..|+. .+. ..++
T Consensus 69 ~~~~~~~~~~~y~~w---r~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~-~~~-------~~~~ 137 (802)
T 4hg6_A 69 LLSAASMLVMRYWFW---RLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPF-PRP-------LQPE 137 (802)
T ss_dssp HHHHHHHHHHHHHHH---HHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC-CCC-------CCTT
T ss_pred HHHHHHHHHHHHHHH---HhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC-CCC-------CCcc
Confidence 355667788999999 99999885431 2223333444444433333444443322222211 111 1112
Q ss_pred CCCeEEEEEeccCCchh-HHHHHHHHHcCCCCCCeeEEEEEeCCCChhHH-----HHHHHH------HHH-hhhcCCeEE
Q 018646 219 FFPMVLVQIPMCNEKEV-YQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ-----TLIKEE------VLK-WQEAGANIV 285 (352)
Q Consensus 219 ~~P~VsViIPayNE~~v-l~~tL~sl~~qdyP~~~leIiVvDDssdd~t~-----~li~~~------~~~-~~~~~v~ii 285 (352)
+.|+|+|+||+|||++. +++||+|+.+|+||++++||+|+||+|+|.+. +++++. .++ ..+.++.
T Consensus 138 ~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~-- 215 (802)
T 4hg6_A 138 ELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVV-- 215 (802)
T ss_dssp TCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCE--
T ss_pred CCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcE--
Confidence 67999999999999955 59999999999999988999999999988872 222211 111 1233454
Q ss_pred EeeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 286 YRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 286 ~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
++.++++.++|++|+|.|+++ +++|||+++|+|++++||++++++..|.+||++++||++..
T Consensus 216 ~i~~~~~~~GKa~alN~gl~~---a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~ 277 (802)
T 4hg6_A 216 YSTRERNEHAKAGNMSAALER---LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHF 277 (802)
T ss_dssp EEECSSCCSHHHHHHHHHHHH---CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCC
T ss_pred EEEecCCCCcchHHHHHHHHh---cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEE
Confidence 456777766799999999996 79999999999999999999999999988999999999764
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.82 E-value=5.8e-20 Score=167.95 Aligned_cols=118 Identities=15% Similarity=0.205 Sum_probs=103.8
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc--------CC
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--------LR 292 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~--------~~ 292 (352)
|+|||+||+||+++.+.++|.|+++|+||+ +||+|+||+|+|.+.++++++.+ +.++.+++.+ .+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~~-----~~~i~~i~~~~~~~~~~~~n 73 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFLN-----DNRVRFYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGGG-----STTEEEEECCCCSHHHHHSS
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHhh-----cCCEEEEecccccccccccc
Confidence 689999999999999999999999999996 99999999999999888765432 3455566665 56
Q ss_pred CCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 293 DGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 293 ~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
.| ++.++|.|+++ +++|||+++|+|+.++|++|++++..+.++|++++|++..
T Consensus 74 ~G-~~~a~N~gi~~---a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~ 126 (255)
T 1qg8_A 74 TR-YAALINQAIEM---AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSAS 126 (255)
T ss_dssp CH-HHHHHHHHHHH---CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEE
T ss_pred cC-HHHHHHHHHHH---cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEece
Confidence 66 99999999996 7999999999999999999999999999889999998764
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.80 E-value=6.3e-19 Score=159.37 Aligned_cols=115 Identities=21% Similarity=0.243 Sum_probs=98.9
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|||+||+||+++.++++|.|+++|+||+ +||+|+||+|+|.+.++++++.++++ ++.+++ ..+.| ++.
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~~~~----~i~~i~-~~n~G-~~~ 74 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAAQYP----NIKVIH-KKNAG-LGM 74 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHHHCS----SEEEEE-CCCCC-HHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHhhCC----CEEEEE-CCCCC-hHH
Confidence 35899999999999999999999999999996 99999999999999988887765443 445554 45666 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc-CCcEEE
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV-TKLIGF 344 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~-dp~vg~ 344 (352)
++|.|+++ +++|||+++|+|+.++|++|++++..+.+ ++++.+
T Consensus 75 a~N~g~~~---a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 75 ACNSGLDV---ATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp HHHHHHHH---CCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHH---cCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 99999996 79999999999999999999999999986 445443
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.74 E-value=1.2e-17 Score=167.46 Aligned_cols=121 Identities=15% Similarity=0.114 Sum_probs=105.0
Q ss_pred CCCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCCh-hHHHHHHHHHHHhhhcCCeEEEeeccCCCCch
Q 018646 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDP-TAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (352)
Q Consensus 219 ~~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd-~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~K 296 (352)
..|.||||||+|||+ +.+.++|.|+++|+||...+||+||||+|+| .+.++++++.++++ .++.+++.+.|.| +
T Consensus 27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~---~~v~vi~~~~n~G-~ 102 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK---VPVHVIRMEQRSG-L 102 (472)
T ss_dssp CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS---SCEEEEECSSCCC-H
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCC---CcEEEEECCCCCC-h
Confidence 689999999999999 9999999999999999756899999998887 58888876654332 2456667777788 9
Q ss_pred HHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 018646 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 297 a~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
+.++|.|+++ +++|||+|+|+|+.++|++|++++..+.++|+++++.
T Consensus 103 ~~a~N~g~~~---A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~ 149 (472)
T 1xhb_A 103 IRARLKGAAV---SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCP 149 (472)
T ss_dssp HHHHHHHHHH---CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHHh---ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEe
Confidence 9999999995 7999999999999999999999999999888877664
No 5
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.73 E-value=9.9e-18 Score=161.20 Aligned_cols=118 Identities=19% Similarity=0.179 Sum_probs=100.3
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEE----e-eccCCC
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVY----R-HRILRD 293 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~----~-~r~~~~ 293 (352)
..|.|||+||+|||++.+.++|.|+.+|+||. .+||+|+||+|+|.+.++++++ +.++.. + ....|.
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~~-------~~~~~~~~~~~~~~~~n~ 117 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVAA-------GARVVSREQALPEVPIRP 117 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHHT-------TCEEEEHHHHCTTSCCCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHHh-------hhhhccceeeeccCCCCC
Confidence 35899999999999999999999999999984 5899999999999998887643 233221 1 145666
Q ss_pred CchHHHHHHHHhccCCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCCcEEEEEec
Q 018646 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 294 G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
| |+.|+|.|++. +++|||+++|+|+. ++|++|++++..+.++|++++|++.
T Consensus 118 G-~~~a~n~g~~~---a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~ 169 (329)
T 3ckj_A 118 G-KGEALWRSLAA---SRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSF 169 (329)
T ss_dssp S-HHHHHHHHHHH---CCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEE
T ss_pred C-HHHHHHHHHHh---CCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEE
Confidence 6 99999999995 79999999999999 8999999999998778999988875
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.69 E-value=5.4e-17 Score=167.47 Aligned_cols=118 Identities=14% Similarity=0.191 Sum_probs=102.2
Q ss_pred CCCeEEEEEeccCCc-hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhH-HHHHHHHHHHhhhcCCeEEEeeccCCCCch
Q 018646 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (352)
Q Consensus 219 ~~P~VsViIPayNE~-~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t-~~li~~~~~~~~~~~v~ii~~~r~~~~G~K 296 (352)
..|.||||||+|||+ +.+.++|.|+++|+||...+|||||||+|+|.+ .++++++.+++ .++.+++...+.| +
T Consensus 110 ~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~----~~v~vi~~~~n~G-~ 184 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF----PSVRILRTKKREG-L 184 (570)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS----TTEEEEECSSCCC-H
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC----CeEEEEECCCCCC-H
Confidence 579999999999999 999999999999999875569999999888887 77777665433 3455666677777 9
Q ss_pred HHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEE
Q 018646 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGF 344 (352)
Q Consensus 297 a~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~ 344 (352)
+.++|.|++. +++|||+|+|+|+.++|++|+.++..+.+++++++
T Consensus 185 ~~A~N~G~~~---A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv 229 (570)
T 2d7i_A 185 IRTRMLGASV---ATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIV 229 (570)
T ss_dssp HHHHHHHHHH---CCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHh---cCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEE
Confidence 9999999995 79999999999999999999999999998887644
No 7
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.69 E-value=6.9e-17 Score=159.61 Aligned_cols=117 Identities=16% Similarity=0.099 Sum_probs=97.9
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHc--CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEE-----eeccCC
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCN--LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVY-----RHRILR 292 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~--qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~-----~~r~~~ 292 (352)
.|.|||+||+|||++.+.++|.++.+ |+||. .+||+||||+|+|.|.++++++ +.++.. +....|
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~~-------~~~v~~~~~~~i~~~~n 164 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAASH-------GAEVYSENELMSGYGDA 164 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHHT-------TCEEEEGGGTTGGGCSC
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHHh-------CchhcccceeEecCCcc
Confidence 58899999999999999999999987 46664 3899999999999999888743 333321 123456
Q ss_pred CCchHHHHHHHHhccCCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCCcEEEEEec
Q 018646 293 DGYKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 293 ~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
.| |+.|+|.|++. +++|||+++|+|.+ ++|++|.+++..+.++|++++|.+.
T Consensus 165 ~G-~g~A~n~G~~~---A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~ 217 (387)
T 3f1y_A 165 HG-KGDAMWRALSV---TRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAA 217 (387)
T ss_dssp CS-HHHHHHHHTTT---CCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEE
T ss_pred CC-HHHHHHHHHHh---cCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEe
Confidence 66 99999999995 79999999999999 8999999999999888888888763
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.68 E-value=1.1e-16 Score=165.57 Aligned_cols=120 Identities=13% Similarity=0.194 Sum_probs=104.1
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|+|+||+||+++.+.++|+|+++|+|++ +||+|+||+|+|.+.++++++.+++ .++.++. ..+.| +++
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~~~~----~~i~~~~-~~n~G-~~~ 444 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHYANH----PRVRFIS-QKNKG-IGS 444 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHHTTC----TTEEEEE-ECCCC-HHH
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHHhhC----CcEEEEe-CCCCC-HHH
Confidence 46899999999999999999999999999997 9999999999999988887654332 2444454 56666 999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEecc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFES 349 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~ 349 (352)
++|.|+++ +++|||+++|+|++++|++|++++..|.++|++++|++..
T Consensus 445 a~n~g~~~---a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 492 (625)
T 2z86_A 445 ASNTAVRL---CRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTN 492 (625)
T ss_dssp HHHHHHHH---CCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEE
T ss_pred HHHHHHHh---cCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeee
Confidence 99999996 7999999999999999999999999998889999988753
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.67 E-value=2.5e-16 Score=163.06 Aligned_cols=123 Identities=19% Similarity=0.272 Sum_probs=104.3
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..|.|+|+||+|||++.+.++|.|+.+|++|. .+||+|+||+++|.+.++++++. ...++.++...++.+++++
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~-----~~~~i~~i~~~~~~~g~~~ 164 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFE-----SLLNIKYVRQKDYGYQLCA 164 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTT-----TTSCEEEEEECCCSCCHHH
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhh-----hcCCeEEEEeCCCCcchhH
Confidence 45899999999999999999999999998875 59999999999999988876432 1234455555554445999
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEeccc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFESL 350 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr~~ 350 (352)
++|.|+++ +++|+|+++|+|+.++|++|+.++..|.++|++++++++..
T Consensus 165 a~N~g~~~---a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 213 (625)
T 2z86_A 165 VRNLGLRA---AKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKY 213 (625)
T ss_dssp HHHHHHHH---CCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEE
T ss_pred HHHHHHHh---CCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeee
Confidence 99999996 79999999999999999999999999998999999887653
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.66 E-value=1.5e-16 Score=160.98 Aligned_cols=116 Identities=14% Similarity=0.140 Sum_probs=97.0
Q ss_pred CCCeEEEEEeccCCch-hHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchH
Q 018646 219 FFPMVLVQIPMCNEKE-VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (352)
Q Consensus 219 ~~P~VsViIPayNE~~-vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka 297 (352)
..|.||||||+|||++ .+.++|.|+++|+||...+|||||||+|+|.+.+.. .++ ..++.+++...|.| ++
T Consensus 64 ~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---~~~----~~~v~vi~~~~n~G-~~ 135 (501)
T 2ffu_A 64 DLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---LGK----IEKVRVLRNDRREG-LM 135 (501)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG---GGG----BTTEEEEECSSCCH-HH
T ss_pred CCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH---Hhc----CCCEEEEECCCCcC-HH
Confidence 6899999999999997 999999999999998755799999998888764221 112 23456666677777 99
Q ss_pred HHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEE
Q 018646 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 298 ~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
.|+|.|+++ +++|||+|+|+|++++|++|+.++..+.+++.. +|+
T Consensus 136 ~A~N~G~~~---A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~-vv~ 180 (501)
T 2ffu_A 136 RSRVRGADA---AQAKVLTFLDSHCECNEHWLEPLLERVAEDRTR-VVS 180 (501)
T ss_dssp HHHHHHHHH---CCSSEEEECCSSEEECTTCHHHHHHHHHHCTTE-EEE
T ss_pred HHHHHHHHh---cCCCEEEEECCCcccCccHHHHHHHHHHhCCCe-EEE
Confidence 999999996 799999999999999999999999999987764 444
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.59 E-value=1e-16 Score=169.51 Aligned_cols=118 Identities=12% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHH
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~a 299 (352)
.|.||||||+||+++.+++||+|+++|+||+ +||+||||+|+|.+.++++++.++++ .++.++..+.|.| .++|
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~~~~---~~i~~i~~~~n~G-~~~a 74 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIKDYD---KNIRFIDLDENSG-HAHA 74 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHHhCC---CCEEEEECCCCCC-HHHH
Confidence 3789999999999999999999999999996 89999999999999988887655432 3455566666777 9999
Q ss_pred HHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEe
Q 018646 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 300 Ln~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
+|.|++. ++||||+++|+|+.+.|++|++++..+. ++++.+...
T Consensus 75 rN~gi~~---A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~ 118 (729)
T 3l7i_A 75 RNIALEE---VETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPI 118 (729)
T ss_dssp ------------------------------------------------
T ss_pred HHHHHHh---ccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEee
Confidence 9999995 8999999999999999999999999998 566655443
No 12
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.56 E-value=3.3e-15 Score=156.75 Aligned_cols=124 Identities=14% Similarity=0.135 Sum_probs=95.6
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCC-eeEEEEEeCCCChh--HHHHHHHHHHHhhhcCCeEEEeeccCCCCc
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKS-KILIQVLDDSDDPT--AQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~-~leIiVvDDssdd~--t~~li~~~~~~~~~~~v~ii~~~r~~~~G~ 295 (352)
..|.|+|+||+||+++.+.+||+|+.+|+|+.+ ..||+||||+|+|. +..+.+ ..+.. +.++.++... |.|
T Consensus 178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e-~~~~~---~~~I~vI~~~-N~G- 251 (657)
T 4fix_A 178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPA-AAARL---GSRLSIHDQP-NLG- 251 (657)
T ss_dssp SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHH-HHHHH---GGGEEEEECC-CCH-
T ss_pred CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHH-HHHhc---CCCEEEEECC-CCC-
Confidence 458999999999999999999999999998322 25899999988652 222222 11111 1245556655 777
Q ss_pred hHHHHHHHHhccCCC-CccEEEEEcCCCCCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 296 KAGNLKSAMNCSYVK-DYEFVAIFDADFQPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 296 Ka~aLn~al~~~~~a-~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
.+++.|.|++..... ++|||+++|+|++++|++|++++..++.+|++++|++.
T Consensus 252 ~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~ 305 (657)
T 4fix_A 252 GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQ 305 (657)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeE
Confidence 899999999863111 67999999999999999999999999998998888864
No 13
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.34 E-value=4.1e-12 Score=125.78 Aligned_cols=117 Identities=16% Similarity=0.241 Sum_probs=85.6
Q ss_pred EEEEeccCCchhHHHHHHHHHc-CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhh-hcCCeEEEee-c-cC--CCCchH
Q 018646 224 LVQIPMCNEKEVYQQSIAAVCN-LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ-EAGANIVYRH-R-IL--RDGYKA 297 (352)
Q Consensus 224 sViIPayNE~~vl~~tL~sl~~-qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~-~~~v~ii~~~-r-~~--~~G~Ka 297 (352)
.||||++|| .+..++..+.. +.+|. +||+||||||+|.|.+++++..++.+ ..+++++... + .. +.| |+
T Consensus 3 lVIiP~~eE--~I~~vl~~l~~~~~~~~--~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~G-kG 77 (397)
T 2bo4_A 3 LVVFPFKHE--HPEVLLHNVRVAAAHPR--VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPG-KG 77 (397)
T ss_dssp EEEEECCSS--CHHHHHHHHHHHHHSTT--CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSS-HH
T ss_pred EEEEeCCcc--CHHHHHHHHHHhccCCC--eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCC-HH
Confidence 355665543 57888887752 34565 78999999999999999987766665 4566665432 2 13 566 99
Q ss_pred HHHHHHHhccC-CCCccEEEEEcCCCC-CChHHHHHHHHHHhcCCcEEEEEe
Q 018646 298 GNLKSAMNCSY-VKDYEFVAIFDADFQ-PNPDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 298 ~aLn~al~~~~-~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
.|++.|+++.. .++||+|+++|||.+ .+|+++.+++..+.+ +.++|.+
T Consensus 78 ~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~--g~D~V~g 127 (397)
T 2bo4_A 78 DGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF--GYGLVRH 127 (397)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc--CCCEEEE
Confidence 99999992211 379999999999997 899999999999864 3444444
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.33 E-value=4.2e-12 Score=117.16 Aligned_cols=97 Identities=9% Similarity=-0.001 Sum_probs=78.1
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
..+.+|| ||+||+.+.+++||+|+.+.-.....+||+||||+|+|. .| .+.
T Consensus 14 ~~~~iSI-I~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~---------------------------~g-~a~ 64 (249)
T 2nxv_A 14 STLMFSV-CSLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ---------------------------FH-GFS 64 (249)
T ss_dssp CCCSEEE-EEEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS---------------------------CC-TTT
T ss_pred CcceEEE-EEeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc---------------------------cc-HHH
Confidence 3578997 567999999999999776422111128999999988651 23 577
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc----CCcEEEEEe
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV----TKLIGFFLF 347 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~----dp~vg~Vqt 347 (352)
++|.|+++ ++|||++|+|+|+.++|++|++++..+++ +|++|+++.
T Consensus 65 a~N~Gi~~---A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~ 114 (249)
T 2nxv_A 65 WHKQMLPR---CKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGV 114 (249)
T ss_dssp HHHHHGGG---CCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEES
T ss_pred HHHHHHHh---cCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEee
Confidence 89999995 79999999999999999999999999987 599988763
No 15
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.16 E-value=2.6e-10 Score=110.30 Aligned_cols=105 Identities=20% Similarity=0.162 Sum_probs=76.6
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHH---HHHHHHHHHhhhcCCeEEEeecc-----
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ---TLIKEEVLKWQEAGANIVYRHRI----- 290 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~---~li~~~~~~~~~~~v~ii~~~r~----- 290 (352)
....++||||+|||+.. +++++++|.+.+ ++||+|||||.|.+. ++++++.+. .+-+++.+|..
T Consensus 51 i~~klSIVVPvYNEe~~---lLesVl~qi~~d--~eIIlVdDGS~D~s~~e~dil~~~~~~---~~~ri~viHQkn~gls 122 (391)
T 2wvl_A 51 VLEQTAIVVPTRNERLK---LLEGVLSGIPHE--ALILVASNSSPDRFQMERDLLEEFAHL---TERPALIFHQKDPALA 122 (391)
T ss_dssp HHTTEEEEEEESSCCHH---HHHHHHHTSCTT--SEEEEEECCCHHHHHHHHHHHHHHHHH---TTCCEEEEETTCHHHH
T ss_pred HHhceEEEEeccCcHHH---HHHHHHhcCCCC--ceEEEEECCCCCChHhHHHHHHHHHhh---cccceEEEeccChHHH
Confidence 35789999999999963 699999998876 899999999999884 455555431 22344444521
Q ss_pred -----------------CCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHH
Q 018646 291 -----------------LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRT 332 (352)
Q Consensus 291 -----------------~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~l 332 (352)
.|.| |+.++-.|+.....++++||.|+|||..++.+..+.+
T Consensus 123 ~Ar~~~G~~~il~~~~~vR~G-KGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyv 180 (391)
T 2wvl_A 123 EALRAGGYPHPIGEDGLVRSG-KAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYV 180 (391)
T ss_dssp HHHHHTTCCTTBCTTSSBCCS-HHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHH
T ss_pred HHHHhcCcchhhccccccccc-chHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHH
Confidence 2334 8888888887521237999999999999977765444
No 16
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.05 E-value=1.7e-10 Score=109.47 Aligned_cols=77 Identities=21% Similarity=0.183 Sum_probs=65.2
Q ss_pred CCCeEEEEEeccCCchhHHHHHHHHH---cCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCc
Q 018646 219 FFPMVLVQIPMCNEKEVYQQSIAAVC---NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (352)
Q Consensus 219 ~~P~VsViIPayNE~~vl~~tL~sl~---~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~ 295 (352)
..|.||||||+||+++.+.++|.|+. +|.|+. +||+|+||++|+. .+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d~~---------------------------f~- 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLD--YGIYVINQAGDTI---------------------------FN- 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSSC---------------------------CC-
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCCCc---------------------------cc-
Confidence 35899999999999999999999999 678886 9999999965421 13
Q ss_pred hHHHHHHHH----hccCCCCccEEEEEcCCCCCChHH
Q 018646 296 KAGNLKSAM----NCSYVKDYEFVAIFDADFQPNPDF 328 (352)
Q Consensus 296 Ka~aLn~al----~~~~~a~gd~V~~lDAD~~~~pd~ 328 (352)
++.++|.|+ +. +++|||+|+|+|+++.|++
T Consensus 113 ~a~a~N~G~~~al~~---A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 113 RAKLLNVGFQEALKD---YDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHHHHH---SCCCEEEEECTTEEESBTT
T ss_pred hhhhhhhHHHHHHHh---CCCCEEEEECCCcccCCCc
Confidence 677788887 63 7999999999999999996
No 17
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=99.04 E-value=6e-10 Score=108.25 Aligned_cols=118 Identities=13% Similarity=0.195 Sum_probs=86.7
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEe-------eccCCC
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYR-------HRILRD 293 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~-------~r~~~~ 293 (352)
+.+.|+|++||.++ ++++|+|+++|..+.+..+|+|.||++.+++.++++.+. ..+..+.. .++.|.
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~-----~~I~~~~~~d~~~~~~~~~N~ 75 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYG-----SAVTHIRQPDLSNIAVQPDHR 75 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTG-----GGSEEEECSCCCCCCCCTTCG
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcC-----CceEEEEcCCccccccchhhc
Confidence 46789999999998 999999999998665567899999999999988887432 11221110 023333
Q ss_pred Cch-----H----HHHHHHHhccCCCCccEEEEEcCCCCCChHHH---HHHHHHHhcCCcEEEEEe
Q 018646 294 GYK-----A----GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFL---RRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 294 G~K-----a----~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L---~~lv~~f~~dp~vg~Vqt 347 (352)
|.+ + .++|.+++ ..++++++++|.|+++.|||+ .++++.++.||.+.+|.+
T Consensus 76 g~~~y~~ia~h~~~al~~vf~---~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa 138 (343)
T 1fo8_A 76 KFQGYYKIARHYRWALGQIFH---NFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSA 138 (343)
T ss_dssp GGHHHHHHHHHHHHHHHHHHT---TSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEES
T ss_pred CcccchhHhHHHHHHHHHHHH---hccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEec
Confidence 321 1 35555565 357999999999999999988 555556688899998875
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.90 E-value=4e-09 Score=103.83 Aligned_cols=106 Identities=22% Similarity=0.258 Sum_probs=69.8
Q ss_pred CeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhH------HHHHHHHHHHhhhcCCeEEEeec-----
Q 018646 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA------QTLIKEEVLKWQEAGANIVYRHR----- 289 (352)
Q Consensus 221 P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t------~~li~~~~~~~~~~~v~ii~~~r----- 289 (352)
..++|+||+|||++.+ |..++.+- |. ..+|++|||+|.|.+ .+.++++.+.. ..+..+++...
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i-~~-~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~-~~~~~Vl~~~~p~v~~ 124 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAI-PH-KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLT-HSKIIMIHQKDPGLAK 124 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHS-CT-TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHH-CCCEEEEETTCHHHHH
T ss_pred CCEEEEEecCcccHHH---HHHHHHcC-CC-CcEEEEEECcCcccccchhhHHHHHHHHhhcc-ccceEEEecCCcchhH
Confidence 4699999999999543 44433321 21 267999999885544 34444433321 23333332211
Q ss_pred ---------------cCCCCchHHHHHHHHhccCCC---CccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 290 ---------------ILRDGYKAGNLKSAMNCSYVK---DYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 290 ---------------~~~~G~Ka~aLn~al~~~~~a---~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
..+.| |+.|+-.|+.. + ++|+|+++|||. ..|.++.+.+..+.
T Consensus 125 ~~~~~g~~~il~~~~~~r~G-KG~Am~aGl~~---A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 125 AFKEVGYTDILDENGMIRSG-KGEGMLVGLLL---AKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp HHHHHTCCTTBCTTSSBCCS-HHHHHHHHHHH---HHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred HhhhccccccccccccccCC-hHHHHHHHHHH---HhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 11245 99999999985 5 899999999999 77888888777665
No 19
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=95.95 E-value=0.04 Score=50.79 Aligned_cols=103 Identities=16% Similarity=0.199 Sum_probs=68.8
Q ss_pred CCeEEEEEeccCCc---hhHHHHHHHHHcCCCCCCeeEEEEEeCCC--ChhHHHHHHHHHHHhhhcCCeEEEeeccCCCC
Q 018646 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (352)
Q Consensus 220 ~P~VsViIPayNE~---~vl~~tL~sl~~qdyP~~~leIiVvDDss--dd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G 294 (352)
+|.+.||-|||... ..+.+.-..++. -|+ +.-|||+|+. .+.+.++++ +-|+...++.-+....
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~--L~WIVVEd~~~~t~~va~lL~-------~sgl~y~HL~~~~p~~ 70 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLLH--VPN--LHWLVVEDAPRRTPLTARLLR-------DTGLNYTHLHVETPRN 70 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTT--SSS--EEEEEEESSSSCCHHHHHHHH-------HHCCEEEEEECCCCHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhcc--CCc--eEEEEEeCCCCCCHHHHHHHH-------HcCCceEEeecCCCcc
Confidence 68999999999987 344444444433 365 7778999954 577777776 5567766554331100
Q ss_pred c-------------hHHHHHHHHhccC------CCCccEEEEEcCCCCCChHHHHHHH
Q 018646 295 Y-------------KAGNLKSAMNCSY------VKDYEFVAIFDADFQPNPDFLRRTV 333 (352)
Q Consensus 295 ~-------------Ka~aLn~al~~~~------~a~gd~V~~lDAD~~~~pd~L~~lv 333 (352)
+ -....|.||++.- ....-+|.|.|.|...+-+..+++-
T Consensus 71 ~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 71 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp HHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred ccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 0 1346777886641 1245789999999999999888753
No 20
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=95.85 E-value=0.094 Score=48.94 Aligned_cols=103 Identities=11% Similarity=0.109 Sum_probs=67.1
Q ss_pred CCCeEEEEEeccCCc---hhHHHHHHHHHcCCCCCCeeEEEEEeCCC--ChhHHHHHHHHHHHhhhcCCeEEEeeccCCC
Q 018646 219 FFPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293 (352)
Q Consensus 219 ~~P~VsViIPayNE~---~vl~~tL~sl~~qdyP~~~leIiVvDDss--dd~t~~li~~~~~~~~~~~v~ii~~~r~~~~ 293 (352)
..|.|.||-|||... ..+.+.-..|.. .|+ +.-|||+|+. .+.+.++++ +-|+...++.-+...
T Consensus 19 ~~p~IivVTPTy~R~~Q~a~LtRLa~TL~~--Vp~--L~WIVVEd~~~~t~~va~lL~-------rsGl~y~HL~~~~p~ 87 (281)
T 3cu0_A 19 SHMTIYVVTPTYARLVQKAELVRLSQTLSL--VPR--LHWLLVEDAEGPTPLVSGLLA-------ASGLLFTHLVVLTPK 87 (281)
T ss_dssp --CEEEEEEEECCSTTHHHHHHHHHHHHTT--SSS--EEEEEEESSSSCCHHHHHHHH-------HHCSEEEEEECCCC-
T ss_pred CCCeEEEEeCCCCCcchhHHHHHHHHHHhc--CCc--eEEEEEcCCCCCCHHHHHHHH-------HcCCceEEeccCCCc
Confidence 689999999999987 233333444443 354 7778999963 577777776 556776666444322
Q ss_pred Cch-------------HHHHHHHHhccC--------C--C----CccEEEEEcCCCCCChHHHHHH
Q 018646 294 GYK-------------AGNLKSAMNCSY--------V--K----DYEFVAIFDADFQPNPDFLRRT 332 (352)
Q Consensus 294 G~K-------------a~aLn~al~~~~--------~--a----~gd~V~~lDAD~~~~pd~L~~l 332 (352)
.+| ....|.||++.- . . ..-+|.|.|.|...+-+..+++
T Consensus 88 ~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 88 AQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp ----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 222 356788887643 1 1 3478999999999999988874
No 21
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=95.64 E-value=0.13 Score=47.18 Aligned_cols=100 Identities=8% Similarity=0.034 Sum_probs=62.8
Q ss_pred chhHHHHH-HHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 233 KEVYQQSI-AAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 233 ~~vl~~tL-~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
...+..++ +.+.+.. -++ |+|+-| ++.+.+.++ ..++++++. +....++. +.+..+++.....+
T Consensus 26 kPli~~~i~~~~~~~~--~~~--vvVvt~--~~~i~~~~~-------~~g~~v~~~-~~~~~~Gt-~~i~~a~~~~~~~~ 90 (253)
T 4fcu_A 26 RPMILRVVDQAKKVEG--FDD--LCVATD--DERIAEICR-------AEGVDVVLT-SADHPSGT-DRLSEVARIKGWDA 90 (253)
T ss_dssp EEHHHHHHHHHHTCTT--CCE--EEEEES--CHHHHHHHH-------TTTCCEEEC-CTTCCCHH-HHHHHHHHHHTCCT
T ss_pred eEhHHHHHHHHHHhcC--CCE--EEEECC--HHHHHHHHH-------HcCCeEEEe-CCCCCChH-HHHHHHHHhcCcCC
Confidence 35888999 8887653 223 444433 344444433 456776543 33333323 46777776531225
Q ss_pred ccEEEEEcCCC-CCChHHHHHHHHHHhcCCc--EEEEEe
Q 018646 312 YEFVAIFDADF-QPNPDFLRRTVPHFKVTKL--IGFFLF 347 (352)
Q Consensus 312 gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~--vg~Vqt 347 (352)
.|+|+++++|. .++++.+.+++..+.++|+ ++.+.+
T Consensus 91 ~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~ 129 (253)
T 4fcu_A 91 DDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCE 129 (253)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEE
T ss_pred CCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeE
Confidence 69999999999 6799999999999987654 444433
No 22
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=95.49 E-value=0.1 Score=47.82 Aligned_cols=102 Identities=10% Similarity=0.111 Sum_probs=66.4
Q ss_pred CCeEEEEEeccCCc---hhHHHHHHHHHcCCCCCCeeEEEEEeCCCC--hhHHHHHHHHHHHhhhcCCeEEEeeccCCCC
Q 018646 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSDD--PTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (352)
Q Consensus 220 ~P~VsViIPayNE~---~vl~~tL~sl~~qdyP~~~leIiVvDDssd--d~t~~li~~~~~~~~~~~v~ii~~~r~~~~G 294 (352)
+|.+.||-|||... ..+.+.-..+.. -|+ +.-|||+|+.. +.+.++++ +-|+...++.-+....
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~--l~WIVVEd~~~~~~~v~~lL~-------~sgl~y~HL~~~~~~~ 70 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFRQ--VAQ--LHWILVEDAAARSELVSRFLA-------RAGLPSTHLHVPTPRR 70 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHTT--STT--EEEEEEESSSSCCHHHHHHHH-------HSCSCEEEEECCCCCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHhc--CCc--eEEEEEcCCCCCCHHHHHHHH-------HcCCceEEEecCCccc
Confidence 68999999999987 333444444443 465 66789999643 44556665 6677766664332111
Q ss_pred ch-------HHHHHHHHhcc---C---CCCccEEEEEcCCCCCChHHHHHH
Q 018646 295 YK-------AGNLKSAMNCS---Y---VKDYEFVAIFDADFQPNPDFLRRT 332 (352)
Q Consensus 295 ~K-------a~aLn~al~~~---~---~a~gd~V~~lDAD~~~~pd~L~~l 332 (352)
+| ....|.|+++. . ....-+|.|.|.|...+-+..+++
T Consensus 71 ~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 71 YKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 11 35677788553 1 123578999999999999888774
No 23
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=95.04 E-value=0.17 Score=46.42 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCcc
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd 313 (352)
..+..+++.+.+.. -++ |+|+-| ++.+.+.++ ..++++++.......| .++ +..+++.....+.|
T Consensus 35 Pli~~~l~~l~~~~--i~~--VvVvt~--~~~i~~~~~-------~~g~~v~~~~~~~~~G-t~~-i~~a~~~l~~~~~d 99 (256)
T 3tqd_A 35 PMIQHVYESAIKSG--AEE--VVIATD--DKRIRQVAE-------DFGAVVCMTSSDHQSG-TER-IAEAAVALGFEDDE 99 (256)
T ss_dssp EHHHHHHHHHHHTT--CSE--EEEEES--CHHHHHHHH-------HTTCEEEECCTTCCSH-HHH-HHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHhCC--CCE--EEEECC--HHHHHHHHH-------HcCCeEEEeCCCCCCc-HHH-HHHHHHHhCcCCCC
Confidence 48888999888754 223 444433 344444443 4567776543333333 443 67777752113679
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHHhcCCc
Q 018646 314 FVAIFDADF-QPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 314 ~V~~lDAD~-~~~pd~L~~lv~~f~~dp~ 341 (352)
.++++++|. ..+++.+.+++..+.++++
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~ 128 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAEDLDEHDN 128 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHCC-
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCC
Confidence 999999999 6789999999999986554
No 24
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=94.10 E-value=1.1 Score=40.47 Aligned_cols=104 Identities=11% Similarity=0.140 Sum_probs=63.2
Q ss_pred eccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhcc
Q 018646 228 PMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCS 307 (352)
Q Consensus 228 PayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~ 307 (352)
|..+. ..+..+++.+.+.. . +++ ++++ | ++.+.+.++ ..++++++.......| .++ +..+++..
T Consensus 23 ~i~Gk-Pli~~~l~~l~~~~-~-~~i-vVv~-~--~~~i~~~~~-------~~g~~v~~~~~~~~~G-t~~-~~~~~~~l 86 (252)
T 3oam_A 23 DIGGK-PMIQWVYEQAMQAG-A-DRV-IIAT-D--DERVEQAVQ-------AFGGVVCMTSPNHQSG-TER-LAEVVAKM 86 (252)
T ss_dssp EETTE-EHHHHHHHHHHHTT-C-SEE-EEEE-S--CHHHHHHHH-------HTTCEEEECCTTCCSH-HHH-HHHHHHHT
T ss_pred eECCE-EHHHHHHHHHHhCC-C-CeE-EEEC-C--HHHHHHHHH-------HcCCEEEEcCCCCCCc-HHH-HHHHHHhc
Confidence 33443 48889999988765 2 343 3333 3 344444333 4567776553333333 554 55555542
Q ss_pred CCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC-CcEEEEEe
Q 018646 308 YVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT-KLIGFFLF 347 (352)
Q Consensus 308 ~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d-p~vg~Vqt 347 (352)
...+.|.++++++|. .+.++.+.+++..+.++ .++.++.+
T Consensus 87 ~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~ 128 (252)
T 3oam_A 87 AIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAV 128 (252)
T ss_dssp TCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEE
T ss_pred CcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEee
Confidence 112579999999999 67899999999998753 34544443
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=92.89 E-value=1.4 Score=40.43 Aligned_cols=99 Identities=9% Similarity=0.091 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCcc
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd 313 (352)
..+..+++.+.+.. -++ |+|+-| ++.+.+.++ ..++++++.. ....++..+ +..+++.....+.|
T Consensus 44 Pmi~~~l~~l~~~~--i~~--IvV~t~--~~~i~~~~~-------~~g~~v~~~~-~~~~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 44 PMIVHVLERARESG--AER--IIVATD--HEDVARAVE-------AAGGEVCMTR-ADHQSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EHHHHHHHHHHHTT--CSE--EEEEES--CHHHHHHHH-------HTTCEEEECC-TTCCSHHHH-HHHHHHHHTCCTTC
T ss_pred EHHHHHHHHHHhCC--CCE--EEEECC--HHHHHHHHH-------HcCCEEEEec-CCCCCCHHH-HHHHHHHhccCCCC
Confidence 48888999888764 233 344333 344444433 4467765542 333333444 66666542123679
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHHhcC-CcEEEEEe
Q 018646 314 FVAIFDADF-QPNPDFLRRTVPHFKVT-KLIGFFLF 347 (352)
Q Consensus 314 ~V~~lDAD~-~~~pd~L~~lv~~f~~d-p~vg~Vqt 347 (352)
+|+++++|. .+.++.+++++..+.+. .++..+..
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~ 144 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAV 144 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEE
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEE
Confidence 999999999 57999999999999753 23454444
No 26
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=91.84 E-value=5.5 Score=34.89 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=58.1
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeec---cCCCCchHHHHHHHHhccCC
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHR---ILRDGYKAGNLKSAMNCSYV 309 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r---~~~~G~Ka~aLn~al~~~~~ 309 (352)
...++.+++.+.+...- ++ |+|+-+ ++...+.++ ..+++++.... ....+ ..+++..|++..
T Consensus 28 kpli~~~i~~~~~~~~~-~~--ivv~~~--~~~i~~~~~-------~~g~~~~~~~~~~~~~~~~-~~~~v~~al~~~-- 92 (229)
T 1qwj_A 28 VPLIGWVLRAALDAGVF-QS--VWVSTD--HDEIENVAK-------QFGAQVHRRSSETSKDSST-SLDAIVEFLNYH-- 92 (229)
T ss_dssp EEHHHHHHHHHHHHTCC-SE--EEEEES--CHHHHHHHH-------HTTCEEEECCGGGSSTTCC-HHHHHHHHHTTC--
T ss_pred EEHHHHHHHHHHhCCCc-CE--EEEECC--hHHHHHHHH-------HcCCEEEeChhhhcCCCCc-HHHHHHHHHHhc--
Confidence 35888888888875432 23 333332 344443332 34677642211 12223 346778888852
Q ss_pred CCccEEEEEcCCCC-CChHHHHHHHHHHhcCC
Q 018646 310 KDYEFVAIFDADFQ-PNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 310 a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp 340 (352)
.+.|.++++++|.- .+++.+.+++..+.++.
T Consensus 93 ~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~ 124 (229)
T 1qwj_A 93 NEVDIVGNIQATSPCLHPTDLQKVAEMIREEG 124 (229)
T ss_dssp TTCSEEEEECTTCTTCCHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEecCCCCcCCHHHHHHHHHHHHhCC
Confidence 36799999999994 68999999999887543
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=90.29 E-value=3.9 Score=35.63 Aligned_cols=95 Identities=6% Similarity=0.059 Sum_probs=57.7
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
....++.+++.+.+. . +++ ++++++ +...+.++ .. +++++. .....++.++.+ .+++. .+
T Consensus 26 g~pli~~~l~~~~~~-~--~~i-~v~~~~---~~i~~~~~-------~~-~~~~~~-~~~~~~g~~~~~-~~~~~---~~ 85 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT-G--ERV-ILATDS---ERVKEVVE-------DL-CEVFLT-PSDLPSGSDRVL-YVVRD---LD 85 (234)
T ss_dssp TEEHHHHHHHHHHTT-T--SCE-EEEESC---HHHHHHHT-------TT-SEEEEC-CTTCCSHHHHHH-HHHTT---CC
T ss_pred CEEHHHHHHHHHHHh-C--CEE-EEECCh---HHHHHHHH-------hc-eEEEEC-CcccccchHHHH-HHHHh---CC
Confidence 346889999998876 2 233 333332 33332221 22 555433 222234355544 46664 35
Q ss_pred ccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEEE
Q 018646 312 YEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 312 gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
.|.++++++|. ..++..+.+++..+.++.++..+.
T Consensus 86 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~ 121 (234)
T 2y6p_A 86 VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLA 121 (234)
T ss_dssp CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEe
Confidence 78999999999 789999999999887654544333
No 28
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=89.70 E-value=2.3 Score=35.89 Aligned_cols=96 Identities=15% Similarity=0.154 Sum_probs=57.7
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
....++.+++.+.+.. -++ |+|+-+...+...+.+ ...++++++. .....| ..+++..|++.. ..+
T Consensus 30 g~pll~~~l~~l~~~~--~~~--i~vv~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~g-~~~~i~~al~~~-~~~ 95 (197)
T 2wee_A 30 DTTVLGATLDVARQAG--FDQ--LILTLGGAASAVRAAM-------ALDGTDVVVV-EDVERG-CAASLRVALARV-HPR 95 (197)
T ss_dssp TEEHHHHHHHHHHHTT--CSE--EEEEECTTHHHHHHHS-------CCTTSEEEEC-C----C-CHHHHHHHHTTS-CTT
T ss_pred CccHHHHHHHHHHhcC--CCc--EEEEeCCCHHHHHHHh-------ccCCCEEEEC-CCcccC-HHHHHHHHHHHh-ccc
Confidence 3468899999988764 223 4444332222222211 1345665532 112234 678889999852 125
Q ss_pred ccEEEEEcCCC-CCChHHHHHHHHHHhcCCcE
Q 018646 312 YEFVAIFDADF-QPNPDFLRRTVPHFKVTKLI 342 (352)
Q Consensus 312 gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~v 342 (352)
.+.++++++|. .++++.+++++.. ..+..+
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~-~~~~~i 126 (197)
T 2wee_A 96 ATGIVLMLGDQPQVAPATLRRIIDV-GPATEI 126 (197)
T ss_dssp EEEEEEEETTCTTCCHHHHHHHHHH-GGGSSE
T ss_pred CCeEEEEeCCcCCCCHHHHHHHHhh-cCCCCE
Confidence 79999999999 5789999999988 543343
No 29
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=88.87 E-value=8.6 Score=33.65 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=56.2
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+.+..... + |+|+-+. +.+.+.++ ..+++++.. .....++-++ +..+++. .
T Consensus 25 ~g~pli~~~i~~~~~~~~~~-~--ivvv~~~--~~i~~~~~-------~~~~~~~~~-~~~~~~g~~~-~~~~~~~---~ 87 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGVA-E--VWVATDD--PRVEQAVQ-------AFGGKAIMT-RNDHESGTDR-LVEVMHK---V 87 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTCC-E--EEEEESC--HHHHHHHH-------HTTCEEEEC-CSCCSSHHHH-HHHHHHH---S
T ss_pred CCchHHHHHHHHHHhCCCCC-e--EEEECCc--HHHHHHHH-------HcCCeEEeC-CCccCCcHHH-HHHHHHh---C
Confidence 34468999999998865422 3 3333332 44433332 345666532 1222332444 3345553 2
Q ss_pred CccEEEEEcCCCC-CChHHHHHHHHHHhcC
Q 018646 311 DYEFVAIFDADFQ-PNPDFLRRTVPHFKVT 339 (352)
Q Consensus 311 ~gd~V~~lDAD~~-~~pd~L~~lv~~f~~d 339 (352)
+.|.++++++|.- ..++.+++++..+.++
T Consensus 88 ~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 88 EADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp CCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 5689999999995 6899999999988765
No 30
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=88.28 E-value=3.4 Score=34.80 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=59.1
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+.+.. . ++ |+|+-+...+...+.+ ...++++++. .....| ..+++..|++.. ..
T Consensus 29 ~g~pli~~~l~~l~~~~-~-~~--i~vv~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~g-~~~~i~~al~~~-~~ 94 (199)
T 2waw_A 29 GDTTLLGATLAMARRCP-F-DQ--LIVTLGGAADEVLEKV-------ELDGLDIVLV-DDAGLG-CSSSLKSALTWV-DP 94 (199)
T ss_dssp TTEEHHHHHHHHHHTSS-C-SE--EEEEECTTHHHHHHHS-------CCTTSEEEEC-CCCCTT-CCCHHHHHHHTS-CT
T ss_pred CccCHHHHHHHHHHhCC-C-Cc--EEEEeCCCHHHHHHHh-------ccCCCEEEEC-CCcccC-HHHHHHHHHHhh-hc
Confidence 33468999999998764 2 23 4444433223322221 1345666532 222234 567888898852 12
Q ss_pred CccEEEEEcCCCC-CChHHHHHHHHHHhcCCcE
Q 018646 311 DYEFVAIFDADFQ-PNPDFLRRTVPHFKVTKLI 342 (352)
Q Consensus 311 ~gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp~v 342 (352)
+.+.++++++|.- ++++.+++++.. ..+.++
T Consensus 95 ~~~~vlv~~~D~P~~~~~~i~~l~~~-~~~~~~ 126 (199)
T 2waw_A 95 TAEGIVLMLGDQPGITASAVASLIAG-GRGATI 126 (199)
T ss_dssp TCSEEEEEETTCTTCCHHHHHHHHHH-HTTCSE
T ss_pred cCCeEEEEeCCcccCCHHHHHHHHhh-cCCCCE
Confidence 5699999999996 589999999988 533333
No 31
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=87.59 E-value=6.9 Score=34.93 Aligned_cols=100 Identities=13% Similarity=0.149 Sum_probs=57.7
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
....++.+++.+.+... ++ |+|+-+. +...+.++ ..++.+++. .....++.+ .+..+++.....+
T Consensus 26 gkpli~~~l~~l~~~~~--~~--ivvv~~~--~~i~~~~~-------~~~~~~~~~-~~~~~~g~~-~~~~~~~~l~~~~ 90 (262)
T 1vic_A 26 GKPMIQHVFEKALQSGA--SR--VIIATDN--ENVADVAK-------SFGAEVCMT-SVNHNSGTE-RLAEVVEKLAIPD 90 (262)
T ss_dssp TEEHHHHHHHHHHHTTC--SE--EEEEESC--HHHHHHHH-------HTTCEEEEC-CCSSCCHHH-HHHHHHHHTTCCT
T ss_pred CeEHHHHHHHHHHhCCC--ce--EEEECCc--HHHHHHHH-------hcCCEEEEC-CccccCChH-HHHHHHHHhccCC
Confidence 34689999999988754 23 4444332 33333332 345665432 122233233 3444443311235
Q ss_pred ccEEEEEcCCC-CCChHHHHHHHHHHhcC-CcEEEEE
Q 018646 312 YEFVAIFDADF-QPNPDFLRRTVPHFKVT-KLIGFFL 346 (352)
Q Consensus 312 gd~V~~lDAD~-~~~pd~L~~lv~~f~~d-p~vg~Vq 346 (352)
.|+++++++|. .+.++.+++++..+.++ .++.++.
T Consensus 91 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~ 127 (262)
T 1vic_A 91 NEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLA 127 (262)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEE
Confidence 78999999999 57899999999988643 2444433
No 32
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=86.02 E-value=7.5 Score=34.64 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=58.7
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCC-hhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDD-PTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV 309 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssd-d~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~ 309 (352)
+....+..+++.+.+..... + |+|+-+..+ +...+.+ . . ++.++ . ...+ ...++..|++....
T Consensus 33 ~Gkpll~~~l~~~~~~~~~~-~--ivVv~~~~~~~~~~~~~----~---~-~v~~v--~--gg~~-r~~sv~~gl~~~~~ 96 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVVD-T--VVVAVPADRTDEARQIL----G---H-RAMIV--A--GGSN-RTDTVNLALTVLSG 96 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCCC-E--EEEEECGGGHHHHHHHH----G---G-GCEEE--E--CCSS-HHHHHHHHHGGGC-
T ss_pred CCeEHHHHHHHHHHhCCCCC-e--EEEECChHHHHHHHHHh----c---C-CeEEE--c--CCCc-hHHHHHHHHHHhhh
Confidence 34468999999988753322 3 444433322 2222221 1 1 34433 1 1222 56778888886311
Q ss_pred -CCccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEE
Q 018646 310 -KDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 310 -a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
.+.|+|++.|+|. .++++.+++++..+.++.+.++.
T Consensus 97 ~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~~i~ 134 (231)
T 3q80_A 97 TAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVP 134 (231)
T ss_dssp --CCSEEEECCTTCTTCCHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCCEEEEEcCCcCCCCHHHHHHHHHHHhhcCCeEEE
Confidence 1258999999998 57999999999999863344433
No 33
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=85.64 E-value=2.9 Score=37.33 Aligned_cols=99 Identities=12% Similarity=0.031 Sum_probs=58.8
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCC--
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV-- 309 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~-- 309 (352)
....+..+++.+.+..... ++ ++|+.+...+...+.+ +.+... ..+.+.. ...+ ..+++..|++....
T Consensus 31 Gkpll~~~l~~~~~~~~~~-~i-vvv~~~~~~~~~~~~~----~~~~~~-~~~~~~~--~~~~-~~~sv~~al~~l~~~~ 100 (246)
T 3f1c_A 31 GKPIIVHTVEKFILNTRFD-KI-LISSPKEWMNHAEDNI----KKYISD-DRIVVIE--GGED-RNETIMNGIRFVEKTY 100 (246)
T ss_dssp TEEHHHHHHHHHHTCTTCS-EE-EEEECGGGHHHHHHHH----HHHCCC-TTEEEEE--CCSS-HHHHHHHHHHHHHHHT
T ss_pred CeeHHHHHHHHHHcCCCCC-EE-EEEeCHHHHHHHHHHH----HHhCCC-CCEEEEC--CCCc-hHHHHHHHHHHHhhhh
Confidence 3469999999998765333 32 3344332222233333 233211 1223332 2234 66777778775311
Q ss_pred --CCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 310 --KDYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 310 --a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
.+.++|+++|+|. .+.++.+.+++..+.++.
T Consensus 101 ~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~ 134 (246)
T 3f1c_A 101 GLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG 134 (246)
T ss_dssp CCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS
T ss_pred cCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 1368999999998 679999999999988654
No 34
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=85.59 E-value=4 Score=38.23 Aligned_cols=109 Identities=6% Similarity=0.022 Sum_probs=70.0
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCC-hhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHH
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDD-PTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssd-d~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~ 298 (352)
....+|+|-+|+..+.+.+.+..+.+..+= -+|+|+=++.. ........ ......+.++++....+
T Consensus 27 ~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v---~~IvVvWn~~~~~pp~~~~~----~~~~~~vpv~v~~~~~n------ 93 (293)
T 1omz_A 27 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSL---HKVIVVWNNVGEKGPEELWN----SLGPHPIPVIFKPQTAN------ 93 (293)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTE---EEEEEEECCTTCCCTHHHHH----HTCCCSSCEEEEECSSC------
T ss_pred CCceEEEEEeecccHHHHHHHHHHhcCCCC---CeEEEEeCCCCCCCChhhcc----ccCCCCccEEEEeCCCC------
Confidence 457999999999989999999888765433 34554444332 22222121 11122355555433322
Q ss_pred HHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCc
Q 018646 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVTKL 341 (352)
Q Consensus 299 aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~dp~ 341 (352)
.+|.-+.-...-+.|-|+.+|.|..++.+-|+..-...+++|+
T Consensus 94 sLnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~Pd 136 (293)
T 1omz_A 94 KMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPD 136 (293)
T ss_dssp CGGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTT
T ss_pred chhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCcc
Confidence 2344333222357899999999999999999999999998887
No 35
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=85.30 E-value=6.4 Score=38.94 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=68.4
Q ss_pred EEeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 226 iIPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
++|..|.+ .++-.|+.+.+.... + |+|+-....+..++.+.+.. ...+.++.+.......| -++|+..++.
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~g~~--~--i~vv~~~~~~~i~~~~~~~~---~~~~~~i~~~~q~~~lG-Ta~Av~~a~~ 104 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKLAPQ--R--LIVVLGHDHQRIAPLVGELA---DTLGRTIDVALQDRPLG-TGHAVLCGLS 104 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHHCCS--E--EEEEECTTHHHHHHHHHHHH---HHHTSCCEEEECSSCCC-HHHHHHHHHT
T ss_pred HeEECChh-HHHHHHHHHHhCCCC--E--EEEEeCCCHHHHHHHHHHHH---HhcCCcEEEEEcCCCCC-cHHHHHHHHH
Confidence 57778876 788888888776422 3 44444444444444443222 23345666665555556 8999999988
Q ss_pred ccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC-CcEEEEE
Q 018646 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT-KLIGFFL 346 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d-p~vg~Vq 346 (352)
.......+.++++.+|+ ....+.+.+++...+.+ .++.++.
T Consensus 105 ~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~ 147 (501)
T 3st8_A 105 ALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLT 147 (501)
T ss_dssp TSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEee
Confidence 63222234566666666 67889999998887644 3444444
No 36
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=85.14 E-value=5.3 Score=34.74 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=56.2
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccC----CCCchHHHHHHHHhccC
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRIL----RDGYKAGNLKSAMNCSY 308 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~----~~G~Ka~aLn~al~~~~ 308 (352)
...++.+++.+.+...-. + |+|+-+ ++...+.++ ..+++++ . ++. ...+...++..|++..
T Consensus 29 kpll~~~l~~~~~~~~~~-~--ivvv~~--~~~i~~~~~-------~~~~~~~-~-~~~~~~~~~~g~~~sv~~~l~~~- 93 (228)
T 1ezi_A 29 ISLLGHTINAAISSKCFD-R--IIVSTD--GGLIAEEAK-------NFGVEVV-L-RPAELASDTASSISGVIHALETI- 93 (228)
T ss_dssp EEHHHHHHHHHHHHCCCS-E--EEEEES--CHHHHHHHH-------HTTCEEE-E-CCC------CHHHHHHHHHHHHH-
T ss_pred cCHHHHHHHHHHhCCCCC-E--EEEECC--CHHHHHHHH-------HcCCEEE-e-CchHHcCCCCChHHHHHHHHHHh-
Confidence 368888999888754222 3 444433 233333332 3456653 2 221 1122567788888753
Q ss_pred CCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 309 VKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 309 ~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
..+.|.++++++|. ...++.+++++..+.++
T Consensus 94 ~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~ 125 (228)
T 1ezi_A 94 GSNSGTVTLLQPTSPLRTGAHIREAFSLFDEK 125 (228)
T ss_dssp TCCSEEEEECCTTCTTCCHHHHHHHHTTCCTT
T ss_pred CCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhc
Confidence 12468999999999 46899999999887643
No 37
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=85.13 E-value=0.89 Score=41.36 Aligned_cols=104 Identities=9% Similarity=0.118 Sum_probs=63.1
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHH------------------HHHhhhcCCeEEEee
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE------------------VLKWQEAGANIVYRH 288 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~------------------~~~~~~~~v~ii~~~ 288 (352)
+|..+. ..++.++..+.+.... + |+|+-....+.+.+.+... .+.. ..+.++.+..
T Consensus 28 l~i~gk-pli~~~l~~l~~~gi~--~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~i~~~~ 101 (281)
T 3juk_A 28 LPIVDK-PLIQYAVEEAMEAGCE--V--MAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNI-IEKCCFSYVR 101 (281)
T ss_dssp CBSSSS-BHHHHHHHHHHHHTCC--E--EEEEECTTHHHHHHHTSCCC--------CCHHHHHHHHHHH-HHHCEEEEEE
T ss_pred ceECCE-EHHHHHHHHHHhCCCC--E--EEEEecCCHHHHHHHHhcchhhhhhhhcccchhhhhhhhcc-ccCccEEEEe
Confidence 455565 6888899988875422 3 4444333323333221100 0000 0245666665
Q ss_pred ccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChH----HHHHHHHHHhcCC
Q 018646 289 RILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPD----FLRRTVPHFKVTK 340 (352)
Q Consensus 289 r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd----~L~~lv~~f~~dp 340 (352)
.....| -++++..|+... +.+.++++.+|....++ .+++++..+.+..
T Consensus 102 ~~~~~G-t~~al~~a~~~l---~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~ 153 (281)
T 3juk_A 102 QKQMKG-LGHAILTGEALI---GNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQ 153 (281)
T ss_dssp CSSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHC
T ss_pred cCCCCC-cHHHHHHHHHHc---CCCCEEEEeCCeeccCccchHHHHHHHHHHHHcC
Confidence 555556 788998888752 34778999999988888 8999999886533
No 38
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=84.60 E-value=6.9 Score=34.19 Aligned_cols=91 Identities=11% Similarity=0.044 Sum_probs=58.5
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+... +|+|+-+. ++....+. + ..++.++. ......| ...++..|++. .
T Consensus 24 ~G~pli~~~~~~l~~~-------~vvvv~~~-~~~~~~~~----~---~~~~~~v~-d~~~~~G-~~~si~~gl~~---~ 83 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-------QTVFVCRD-EKQAEKLS----S---RYEAEFIW-DLHKGVG-SIAGIHAALRH---F 83 (208)
T ss_dssp TTEEHHHHHHHHHTTS-------EEEEECSS-HHHHHHHH----T---TSCSCEEC-CTTCCCS-HHHHHHHHHHH---H
T ss_pred CCeeHHHHHHHHhcCC-------CEEEEECC-HHHHHHHH----H---hcCCeEEe-cCCCCCC-hHHHHHHHHHH---c
Confidence 5557899999998765 35555432 22222111 1 24566542 2223334 67889999996 3
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHHhc-CCcEE
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKV-TKLIG 343 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f~~-dp~vg 343 (352)
.+++ ++++|. .++++.+++++..+.+ +.++.
T Consensus 84 -~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v 116 (208)
T 3ngw_A 84 -GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDAL 116 (208)
T ss_dssp -SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred -CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEE
Confidence 6899 999999 5699999999999874 34443
No 39
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=84.29 E-value=8.4 Score=35.52 Aligned_cols=95 Identities=11% Similarity=0.128 Sum_probs=57.9
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhh-cCC-eEEEeeccCCCCchHHHHHHHH
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE-AGA-NIVYRHRILRDGYKAGNLKSAM 304 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~-~~v-~ii~~~r~~~~G~Ka~aLn~al 304 (352)
+|..+....++.++..+.+. .. ++ ++++++...+.+.+.+ . . .++ ++.++..+...| -++++..++
T Consensus 31 l~i~gg~pli~~~l~~l~~~--~~-~i-~vv~~~~~~~~i~~~~----~---~~~~~~~~~~i~~~~~~g-t~~al~~a~ 98 (308)
T 2qh5_A 31 LKLFDHKSLFELSFKRNASL--VD-ET-LIVCNEKHYFLALEEI----K---NEIKNKSVGFLLESLSKN-TANAIALSA 98 (308)
T ss_dssp CTTBTTBCHHHHHHHHHHTT--CS-EE-EEEEEGGGHHHHHHHT----T---TTCSSCEEEEEEESSCCC-HHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHcc--CC-CE-EEEEChhHHHHHHHHH----H---HhhCCCccEEEeCCCCCC-hHHHHHHHH
Confidence 45544556899999999876 22 33 3444432212222222 1 2 344 444444444445 888888888
Q ss_pred hccCCCCccEEEEEcCCCCC-ChHHHHHHHHH
Q 018646 305 NCSYVKDYEFVAIFDADFQP-NPDFLRRTVPH 335 (352)
Q Consensus 305 ~~~~~a~gd~V~~lDAD~~~-~pd~L~~lv~~ 335 (352)
... ...++++++.+|... +++.+.+++..
T Consensus 99 ~~l--~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 99 LMS--DKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HTS--CTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHh--CCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 752 235689999999987 78888888875
No 40
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=84.24 E-value=5.4 Score=38.53 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=60.3
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
...++.+++.+.+... ++ |+|+-...++...+.++ ..++.++ ......| -.+++..|++.. .+.
T Consensus 36 ~pli~~~l~~l~~~~~--~~--i~vv~~~~~~~i~~~~~-------~~~~~~v--~~~~~~g-~~~~i~~~~~~~--~~~ 99 (459)
T 4fce_A 36 KPMVQHVIDAAMKLGA--QH--VHLVYGHGGELLKKTLA-------DPSLNWV--LQAEQLG-TGHAMQQAAPHF--ADD 99 (459)
T ss_dssp EEHHHHHHHHHHHHTC--SC--EEEEESSCHHHHHHHC------------CEE--ECSSCCC-HHHHHHHHGGGS--CTT
T ss_pred eeHHHHHHHHHHhCCC--Cc--EEEEeCCCHHHHHHHhc-------cCCcEEE--eCCCCCC-cHHHHHHHHHhc--CCC
Confidence 3688899999887652 23 33333323333333222 2234443 3444445 788899999862 346
Q ss_pred cEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEEE
Q 018646 313 EFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 313 d~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
|.++++++|. .+.++.+++++..+.+ .+..++.
T Consensus 100 ~~~lv~~~D~P~i~~~~i~~l~~~~~~-~~~~~~~ 133 (459)
T 4fce_A 100 EDILMLYGDVPLISVDTLQRLLAAKPE-GGIGLLT 133 (459)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT-TSEEEEE
T ss_pred CcEEEEeCCcccCCHHHHHHHHHHHhh-CCEEEEE
Confidence 8999999999 6799999999998875 4444443
No 41
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=83.96 E-value=4.8 Score=34.93 Aligned_cols=99 Identities=12% Similarity=0.079 Sum_probs=57.4
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCC-hhHHHHHHHHHHHhhh-cCCeEEEeeccCCCCchHHHHHHHHhccCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDD-PTAQTLIKEEVLKWQE-AGANIVYRHRILRDGYKAGNLKSAMNCSYV 309 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssd-d~t~~li~~~~~~~~~-~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~ 309 (352)
....++.+++.+.+...-. + |+|+-+... +...+.++ .+.- ........ ....| ...++..|++....
T Consensus 30 g~pli~~~l~~l~~~~~~~-~--i~vv~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~-~~~~i~~~l~~~~~ 99 (236)
T 2vsh_A 30 DRPILIHTIEKFVLEPSIE-K--IVVGVHGDWVSHAEDLVD----KYLPLYKERIIIT--KGGAD-RNTSIKNIIEAIDA 99 (236)
T ss_dssp TEEHHHHHHHHHHTCTTCC-C--EEEEECGGGHHHHHHHHH----HHCGGGGGGEEEE--ECCSS-HHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHcCCCCC-e--EEEEeCHHHHHHHHHHHH----hccccccCceEEE--CCCCc-hHHHHHHHHHHHHh
Confidence 4468999999988763222 2 344333322 33333332 2210 00111211 12234 67778888775210
Q ss_pred --C--CccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 310 --K--DYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 310 --a--~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
. +.++++++++|. ...++.+++++..+.++.
T Consensus 100 ~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2vsh_A 100 YRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHD 135 (236)
T ss_dssp HSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSS
T ss_pred hccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 2 358999999999 779999999999887644
No 42
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=82.72 E-value=10 Score=36.48 Aligned_cols=96 Identities=17% Similarity=0.145 Sum_probs=59.6
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
...++.+++.+.+.... ++ ++++++ ..+...+.+ ...++.++ ......| ..+++..+++.. .+.
T Consensus 33 kpli~~~l~~l~~~~~~--~i-ivv~~~-~~~~i~~~~-------~~~~~~~v--~~~~~~g-~~~~~~~~~~~~--~~~ 96 (456)
T 2v0h_A 33 KPMVKHVIDTAHQLGSE--NI-HLIYGH-GGDLMRTHL-------ANEQVNWV--LQTEQLG-TAHAVQQAAPFF--KDN 96 (456)
T ss_dssp EEHHHHHHHHHHHTTCS--CE-EEEECT-THHHHHHHT-------TTCCCEEE--ECSCCCC-HHHHHHHHGGGC--CTT
T ss_pred ccHHHHHHHHHHhCCCC--cE-EEEeCC-CHHHHHHHh-------hcCCcEEE--eCCCCCC-cHHHHHHHHHhc--CCC
Confidence 36888999999886522 33 334433 222222221 12245543 3333445 778888898852 337
Q ss_pred cEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEE
Q 018646 313 EFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 313 d~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
|.++++++|. ...+..+++++..+.+ .++.++
T Consensus 97 ~~vlv~~~D~P~i~~~~i~~l~~~~~~-~~~~~~ 129 (456)
T 2v0h_A 97 ENIVVLYGDAPLITKETLEKLIEAKPE-NGIALL 129 (456)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT-TSEEEE
T ss_pred CeEEEEcCCcceeCHHHHHHHHHHHhc-CCEEEE
Confidence 8999999999 5788999999988764 444443
No 43
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=82.37 E-value=20 Score=30.86 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=58.5
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCC-
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV- 309 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~- 309 (352)
+....++.+++.+.+..... + |+|+-+...+...+ +. ++... .+.+. ....| ..+++..|++....
T Consensus 32 ~gkpli~~~l~~l~~~~~~~-~--ivvv~~~~~~~~~~-~~----~~~~~--~i~~~--~~~~~-~~~si~~~l~~~~~~ 98 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAVD-L--TVVVVSPEDTFADK-VQ----TAFPQ--VRVWK--NGGQT-RAETVRNGVAKLLET 98 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTCC-E--EEEECCTTCSTHHH-HH----HHCTT--SEEEC--CCCSS-HHHHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHcCCCCC-e--EEEEECccHHHHHH-HH----hcCCC--ceEEE--cCCCc-HHHHHHHHHHHHhhh
Confidence 34568999999988754332 3 44444333334433 22 11111 23332 23344 77888888875211
Q ss_pred ---CCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 310 ---KDYEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 310 ---a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
.+.+.++++++|. ..+++.+.+++..+.++.
T Consensus 99 ~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 99 GLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp SSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred ccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 1468999999998 568999999999887544
No 44
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=82.19 E-value=2.1 Score=37.99 Aligned_cols=25 Identities=24% Similarity=0.432 Sum_probs=23.0
Q ss_pred CCCccEEEEEcCC---CCCChHHHHHHH
Q 018646 309 VKDYEFVAIFDAD---FQPNPDFLRRTV 333 (352)
Q Consensus 309 ~a~gd~V~~lDAD---~~~~pd~L~~lv 333 (352)
..++|+++++||| ...+|+.+.+++
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl 78 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKF 78 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHH
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHH
Confidence 4678999999999 999999999998
No 45
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=81.48 E-value=3.6 Score=35.28 Aligned_cols=86 Identities=15% Similarity=0.239 Sum_probs=52.7
Q ss_pred CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCC
Q 018646 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 231 NE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a 310 (352)
+....++.+++.+... ++ ++|+.+. .+.. ++.. ..++ ++.. .....| -.+++..|++.. .
T Consensus 26 ~g~pll~~~l~~l~~~-----~i-vvv~~~~-~~~~----~~~~----~~~~-~v~~-~~~~~G-~~~si~~al~~~--~ 85 (197)
T 3d5n_A 26 DNTPIIMRTIRIYGDL-----EK-IIIVGKY-VNEM----LPLL----MDQI-VIYN-PFWNEG-ISTSLKLGLRFF--K 85 (197)
T ss_dssp SSSBHHHHHHHHTTTS-----BC-CEEECTT-HHHH----GGGC----TTSC-EEEC-TTGGGC-HHHHHHHHHHHT--T
T ss_pred CceEHHHHHHHHHHhC-----CE-EEEECCC-HHHH----HHHh----cCCE-EEEC-CCCCCC-HHHHHHHHHHhh--c
Confidence 3446888899888765 12 2333332 2222 2111 1345 3321 212235 678888898862 2
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHHH
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPHF 336 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~f 336 (352)
+.|.++++++|. .++++.+++++..+
T Consensus 86 ~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 86 DYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp TSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred cCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 348999999999 57999999999887
No 46
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=80.95 E-value=3.9 Score=38.14 Aligned_cols=76 Identities=20% Similarity=0.298 Sum_probs=52.8
Q ss_pred CCeEEEEEeccCCchhHHHHHHHHH----cCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCc
Q 018646 220 FPMVLVQIPMCNEKEVYQQSIAAVC----NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (352)
Q Consensus 220 ~P~VsViIPayNE~~vl~~tL~sl~----~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~ 295 (352)
.-+|.||||-+|..+.+...+..+. +|.. .+.|+|++..++ ..-+
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l---~y~I~VieQ~~~---------------------------~~FN- 98 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV---AHHIFVLNQVDR---------------------------FRFN- 98 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC---EEEEEEEEECSS---------------------------SCCC-
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC---ceEEEEEecCCC---------------------------Cccc-
Confidence 4589999999999988877775543 3432 366788775431 0113
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCCCCChH
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd 327 (352)
++.-+|.|+... ..++|+++|-|.|.+|..|
T Consensus 99 Ra~LlNvGf~ea-~~~~d~~ifHDVDLlP~dd 129 (287)
T 3lw6_A 99 RASLINVGFQFA-SDVYDYIAMHDVDLLPLND 129 (287)
T ss_dssp HHHHHHHHHHHS-CTTCCEEEEECTTEEECCT
T ss_pred hhheecccHHHH-hccCCEEEEecccccccCC
Confidence 666777777643 2458999999999998765
No 47
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=79.60 E-value=3 Score=38.19 Aligned_cols=105 Identities=12% Similarity=0.118 Sum_probs=62.0
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHH---HHHhh----------h---cCCeEEEeecc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE---VLKWQ----------E---AGANIVYRHRI 290 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~---~~~~~----------~---~~v~ii~~~r~ 290 (352)
+|..+. ..++.++..+.+.... + |+|+-+...+.+.+.+... ..+.. . .+.++.+....
T Consensus 40 l~i~gk-pli~~~l~~l~~~g~~--~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~ 114 (297)
T 2ux8_A 40 LPVVDR-PLIQYAVDEAVEAGIE--Q--MIFVTGRGKSALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQ 114 (297)
T ss_dssp CEETTE-EHHHHHHHHHHHTTCC--E--EEEEECTTCHHHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECC
T ss_pred eeECCe-EHHHHHHHHHHhCCCC--E--EEEEeCCCHHHHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCC
Confidence 344443 6888899998876422 3 4444443344444332210 00000 0 24455555444
Q ss_pred CCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCC--hHHHHHHHHHHhcCC
Q 018646 291 LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN--PDFLRRTVPHFKVTK 340 (352)
Q Consensus 291 ~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~--pd~L~~lv~~f~~dp 340 (352)
...| -++++..|+... +.+.++++.+|.... +..+++++..+.++.
T Consensus 115 ~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~ 162 (297)
T 2ux8_A 115 EPMG-LGHAVWCARDIV---GDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVG 162 (297)
T ss_dssp SCCC-HHHHHHTTHHHH---CSSCEEEECTTEEEESSSCHHHHHHHHHHHHC
T ss_pred CCCC-hHHHHHHHHHHc---CCCcEEEEeCCeecCCChHHHHHHHHHHHhcC
Confidence 4445 788888877752 357899999999887 678999998876433
No 48
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=78.69 E-value=8.7 Score=33.20 Aligned_cols=94 Identities=12% Similarity=0.029 Sum_probs=57.1
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
...++.+++.+.+...- -+|+|+-+...+.. .+.... ..+..+.+.. ...| ..+++..|++.. ..+.
T Consensus 32 ~pli~~~l~~l~~~~~~---~~ivvv~~~~~~~~---~~~~~~---~~~~~v~~~~--~~~~-~~~sv~~al~~~-~~~~ 98 (228)
T 2yc3_A 32 QPIALYSFFTFSRMPEV---KEIVVVCDPFFRDI---FEEYEE---SIDVDLSFAI--PGKE-RQDSVYSGLQEI-DVNS 98 (228)
T ss_dssp EEHHHHHHHHHHHCTTE---EEEEEECCGGGHHH---HHTTTT---TSSSEEEEEC--CCSS-HHHHHHHHHTTS-CTTC
T ss_pred EEHHHHHHHHHHcCCCC---CeEEEEEChHHHHH---HHHHHH---hCCCcEEEEC--CCCC-HHHHHHHHHHhh-ccCC
Confidence 46888899988875221 13455443322222 111111 2233444442 2245 778888898853 2246
Q ss_pred cEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 313 EFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 313 d~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
++|+++|+|. .+.++.+++++..+.++
T Consensus 99 ~~vl~~d~d~P~~~~~~i~~l~~~~~~~ 126 (228)
T 2yc3_A 99 ELVCIHDSARPLVNTEDVEKVLKDGSAV 126 (228)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCccCCHHHHHHHHHHHHhc
Confidence 8999999997 67999999999988653
No 49
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=78.13 E-value=11 Score=34.68 Aligned_cols=108 Identities=6% Similarity=-0.062 Sum_probs=62.3
Q ss_pred EEecc-CCchhHHHHHHHHHcCCCCCCeeEEEEEeCCC-ChhHHHHHHHHHHHhhhcCCeEEEeecc-------------
Q 018646 226 QIPMC-NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSD-DPTAQTLIKEEVLKWQEAGANIVYRHRI------------- 290 (352)
Q Consensus 226 iIPay-NE~~vl~~tL~sl~~qdyP~~~leIiVvDDss-dd~t~~li~~~~~~~~~~~v~ii~~~r~------------- 290 (352)
++|.- +....+..++..+.+.... + |+|+-... .+...+.+. .....+.++.+....
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~~~~--~--i~vv~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 96 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRAGFG--R--LVFVIRHSFEKEFREKIL----TKYEGRIPVELVFQELDRLPEGFSCPEG 96 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHHTCC--E--EEEEECGGGHHHHHHHTH----HHHTTTSCEEEEECCTTCCCTTCCCCTT
T ss_pred EeEcCCCCeeHHHHHHHHHHHCCCC--e--EEEEcCchHHHHHHHHHH----HHhccCCcEEEEeccccccccccccccc
Confidence 45653 3346888888888775422 3 44443332 233333322 111223455554433
Q ss_pred --CCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc----CCcEEEEE
Q 018646 291 --LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV----TKLIGFFL 346 (352)
Q Consensus 291 --~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~----dp~vg~Vq 346 (352)
...| -++++..+... -+.+ ++++.+|...+++.+++++.+..+ +.++.++.
T Consensus 97 ~~~~~G-t~~al~~a~~~---i~~~-~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~~ 153 (303)
T 3pnn_A 97 REKPWG-TNHAVLMGRDA---IREP-FAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMVG 153 (303)
T ss_dssp CCSCCC-HHHHHHTTTTT---CCSC-EEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEEE
T ss_pred ccccCC-cHHHHHHHHHh---cCCC-EEEEECCeecCHHHHHHHHHHHHHhccccCceEEEE
Confidence 2345 77888877775 2444 566789999999999999998864 23455544
No 50
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=77.85 E-value=3.5 Score=34.93 Aligned_cols=93 Identities=13% Similarity=0.191 Sum_probs=54.9
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
....++.+++.+.+.... + |+|+-+..++.+.+.++. .+. ....+.++. ....| ..+++..|++. .
T Consensus 26 g~pli~~~l~~l~~~~~~--~--v~vv~~~~~~~i~~~~~~---~~~-~~~~~~~~~-~~~~g-~~~si~~al~~---~- 91 (196)
T 3rsb_A 26 GRCLIDYVVSPLLKSKVN--N--IFIATSPNTPKTKEYINS---AYK-DYKNIVVID-TSGKG-YIEDLNECIGY---F- 91 (196)
T ss_dssp TEEHHHHHHHHHHSSSCC--C--EEEECCTTCHHHHHHHHH---HTT-TTTEEEE----------CCCCCTTTTT---C-
T ss_pred CEEHHHHHHHHHHHCCCC--E--EEEEeCCChHHHHHHHHh---hcc-CCCCEEEEE-CCCCC-cHHHHHHHHHh---C-
Confidence 346899999999986522 3 444444345555444432 121 111333332 22333 45566667774 2
Q ss_pred ccEEEEEcCCC-CCChHHHHHHHHHHhc
Q 018646 312 YEFVAIFDADF-QPNPDFLRRTVPHFKV 338 (352)
Q Consensus 312 gd~V~~lDAD~-~~~pd~L~~lv~~f~~ 338 (352)
.+.++++++|. .+.++.+++++..+.+
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 92 SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 78999999999 5799999999999974
No 51
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=77.20 E-value=17 Score=31.08 Aligned_cols=91 Identities=15% Similarity=0.166 Sum_probs=54.8
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
....++.+++.+.+..... + |+|+-+..... .+++.. . +..+.+... ..+ ...++..|++.. .+
T Consensus 29 g~pli~~~l~~l~~~~~~~-~--i~vv~~~~~~~---~~~~~~---~--~~~v~~~~~--~~~-~~~~i~~al~~~--~~ 92 (223)
T 2xwl_A 29 GTPLLEHALSGLRASGVID-R--IVIAVPPALTD---ESKLVF---G--GEDSVIVSG--GVD-RTESVALALEAA--GD 92 (223)
T ss_dssp TEEHHHHHHHHHHHHSCCS-E--EEEEECGGGHH---HHHHHT---C--BTTEEEEEC--CSS-HHHHHHHHHTTC--TT
T ss_pred CeEHHHHHHHHHhcCCCCC-e--EEEEEcccHHH---HHHHHh---c--cCCeEEEcC--CCC-HHHHHHHHHHhc--CC
Confidence 3468888888887654222 3 44443322211 122111 1 123333322 234 678888899852 25
Q ss_pred ccEEEEEcCCC-CCChHHHHHHHHHH-hc
Q 018646 312 YEFVAIFDADF-QPNPDFLRRTVPHF-KV 338 (352)
Q Consensus 312 gd~V~~lDAD~-~~~pd~L~~lv~~f-~~ 338 (352)
.++++++++|. .++++.+++++..+ .+
T Consensus 93 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 121 (223)
T 2xwl_A 93 AEFVLVHDAARALTPPALIARVVAALKEG 121 (223)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 78999999999 57899999999988 53
No 52
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=75.62 E-value=6 Score=36.17 Aligned_cols=106 Identities=15% Similarity=0.123 Sum_probs=61.3
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHH---HHHHh------------h---hcCCeEEEee
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE---EVLKW------------Q---EAGANIVYRH 288 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~---~~~~~------------~---~~~v~ii~~~ 288 (352)
+|..+. ..++.++..+.+... ++ |+|+-+...+.+.+.+.. ..... . ..++++.+..
T Consensus 34 l~i~gk-pli~~~l~~l~~~gi--~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~ 108 (302)
T 2e3d_A 34 LPLVDK-PLIQYVVNECIAAGI--TE--IVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVR 108 (302)
T ss_dssp CEETTE-EHHHHHHHHHHHTTC--CE--EEEEECGGGHHHHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEEEE
T ss_pred eEECCe-EHHHHHHHHHHHCCC--CE--EEEEeCCCHHHHHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEEee
Confidence 344444 688899999887642 23 444333323333332211 00000 0 1255665554
Q ss_pred ccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCC----hH---HHHHHHHHHhcCCc
Q 018646 289 RILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN----PD---FLRRTVPHFKVTKL 341 (352)
Q Consensus 289 r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~----pd---~L~~lv~~f~~dp~ 341 (352)
.....| -++++..|+... +.+.++++.+|.... +. .+++++..+.++..
T Consensus 109 ~~~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~ 164 (302)
T 2e3d_A 109 QGLAKG-LGHAVLCAHPVV---GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH 164 (302)
T ss_dssp CSSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred CCccCC-HHHHHHHHHHHc---CCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence 444455 888888888752 346789999999876 45 68999988764333
No 53
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=75.45 E-value=6.4 Score=36.59 Aligned_cols=58 Identities=14% Similarity=-0.087 Sum_probs=39.9
Q ss_pred CCeEEEeeccCCCCchHHHHHHHHhccCCCCccEEEEEcCCCCCC-hHHHHHHHHHHhcCC
Q 018646 281 GANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN-PDFLRRTVPHFKVTK 340 (352)
Q Consensus 281 ~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~-pd~L~~lv~~f~~dp 340 (352)
+.++.+.......| -++++..|+... ..+.|.++++.+|.... +..+.+++..+.++.
T Consensus 104 g~~i~~~~~~~~~G-t~~al~~a~~~l-~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~ 162 (323)
T 2pa4_A 104 LIKAVPVTQDKPLG-LGHAVGLAESVL-DDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFG 162 (323)
T ss_dssp HCEEEEEECSSCCC-HHHHHHTTGGGS-CSSCCEEEEECTTEEEESSCHHHHHHHHHHTTC
T ss_pred CcceEEEeCCccCC-cHHHHHHHHHHh-cCCCCeEEEEeCCcccCchHHHHHHHHHHHhcC
Confidence 35555554444445 788888887752 12345689999999886 588999999887544
No 54
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=74.96 E-value=14 Score=32.11 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=57.2
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
....++.+++.+.+..... +|+|+-+..++...+ +. .+... .+.+.. ...| ...++..|++.. .+
T Consensus 34 g~pll~~~i~~l~~~~~~~---~ivvv~~~~~~~~~~-~~----~~~~~--~v~~~~--~~~g-~~~~i~~al~~~--~~ 98 (236)
T 1i52_A 34 NQTILEHSVHALLAHPRVK---RVVIAISPGDSRFAQ-LP----LANHP--QITVVD--GGDE-RADSVLAGLKAA--GD 98 (236)
T ss_dssp TEEHHHHHHHHHHTSTTEE---EEEEEECTTCCSGGG-SG----GGGCT--TEEEEE--CCSS-HHHHHHHHHHTS--TT
T ss_pred CEEHHHHHHHHHHhCCCCC---eEEEEeCccHHHHHH-HH----hcCCC--CEEEEC--CCCC-HHHHHHHHHHhc--CC
Confidence 3468888999988653221 344443333333222 21 11111 232222 2245 778888898852 24
Q ss_pred ccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 018646 312 YEFVAIFDADF-QPNPDFLRRTVPHFKVTK 340 (352)
Q Consensus 312 gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp 340 (352)
.|.++++++|. .++++.+++++..+.+++
T Consensus 99 ~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 99 AQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred CCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 68999999998 469999999999887544
No 55
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=72.08 E-value=16 Score=31.26 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=52.3
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCC-CCchHHHHHHHHhccCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR-DGYKAGNLKSAMNCSYVK 310 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~-~G~Ka~aLn~al~~~~~a 310 (352)
....++.+++.+... .++ |+|+-+...+ ++ . ..++.++.. .... .| ..+++..|++. .
T Consensus 32 G~pli~~~l~~l~~~---~~~--ivvv~~~~~~---~~-~-------~~~~~~v~~-~~~~~~G-~~~si~~~l~~---~ 90 (201)
T 1e5k_A 32 GKPLWQHVADALMTQ---LSH--VVVNANRHQE---IY-Q-------ASGLKVIED-SLADYPG-PLAGMLSVMQQ---E 90 (201)
T ss_dssp TEEHHHHHHHHHHHH---CSC--EEEECSSSHH---HH-H-------TTSCCEECC-CTTCCCS-HHHHHHHHHHH---C
T ss_pred ceeHHHHHHHHHHhh---CCE--EEEEcCCcHH---HH-h-------hcCCeEEec-CCCCCCC-HHHHHHHHHHh---C
Confidence 346888888887742 123 4444332211 11 1 345655422 1122 34 78889999985 3
Q ss_pred CccEEEEEcCCC-CCChHHHHHHHHH
Q 018646 311 DYEFVAIFDADF-QPNPDFLRRTVPH 335 (352)
Q Consensus 311 ~gd~V~~lDAD~-~~~pd~L~~lv~~ 335 (352)
+.|+++++++|. .+.++.+++++..
T Consensus 91 ~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 91 AGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp CSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 579999999999 6799999999887
No 56
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=70.43 E-value=10 Score=34.02 Aligned_cols=101 Identities=16% Similarity=0.108 Sum_probs=60.0
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCC-CChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDS-DDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDs-sdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
...++.+++.+.+... ++ |+|+-+. ..+...+ ........++++.+.......| -++++..+++.. +
T Consensus 55 ~pli~~~l~~l~~~g~--~~--iivv~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~G-~~~al~~a~~~~---~ 122 (269)
T 4ecm_A 55 YPMIYHAVYKLKQCDI--TD--IMIITGKEHMGDVVS----FLGSGQEFGVSFTYRVQDKAGG-IAQALGLCEDFV---G 122 (269)
T ss_dssp EEHHHHHHHHHHHTTC--CE--EEEEECTTTHHHHHH----HHTTSGGGTCEEEEEECSSCCC-HHHHHHTTHHHH---T
T ss_pred EEHHHHHHHHHHHCCC--CE--EEEECChhhHHHHHH----HHhhccccCceEEEeeCCccCc-HHHHHHHHHHhc---C
Confidence 3688899999988642 23 4443332 2233322 2221113456766665444445 778888887752 3
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHhcC-CcEEEEE
Q 018646 312 YEFVAIFDADFQPNPDFLRRTVPHFKVT-KLIGFFL 346 (352)
Q Consensus 312 gd~V~~lDAD~~~~pd~L~~lv~~f~~d-p~vg~Vq 346 (352)
.+.++++.+|.... .-+.+++..+.+. .++.++.
T Consensus 123 ~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~~~~~~~ 157 (269)
T 4ecm_A 123 NDRMVVILGDNIFS-DDIRPYVEEFTNQKEGAKVLL 157 (269)
T ss_dssp TSEEEEEETTEEES-SCSHHHHHHHHTSSSSEEEEE
T ss_pred CCcEEEEeCCccCc-cCHHHHHHHHHhcCCCeEEEE
Confidence 68899999999766 5677788777643 3444433
No 57
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=65.68 E-value=13 Score=35.99 Aligned_cols=103 Identities=8% Similarity=0.029 Sum_probs=61.3
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..+. ..++.+++.+.+.. -++ |+|+-+...+.. ++.. ..++.++ ......| .++++..|++.
T Consensus 34 ~~i~gk-pli~~~l~~l~~~g--~~~--iivv~~~~~~~i----~~~~----~~~i~~v--~~~~~~G-~~~sl~~a~~~ 97 (468)
T 1hm9_A 34 HKVAGI-SMLEHVFRSVGAIQ--PEK--TVTVVGHKAELV----EEVL----AGQTEFV--TQSEQLG-TGHAVMMTEPI 97 (468)
T ss_dssp SEETTE-EHHHHHHHHHHTTC--CSE--EEEEECTTHHHH----HHSS----SSSSEEE--ECSSCCC-HHHHHHTTHHH
T ss_pred eEECCc-cHHHHHHHHHHhcC--CCC--EEEEECCCHHHH----HHHh----CCCcEEE--eCCccCC-hHHHHHHHHHH
Confidence 344444 68999999998764 223 344333222222 2111 1145544 3333345 78888888775
Q ss_pred cCCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCC-cEEEEE
Q 018646 307 SYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKVTK-LIGFFL 346 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp-~vg~Vq 346 (352)
. ..+.|.++++++|.- +.++.+++++..+.++. ++.++.
T Consensus 98 ~-~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~ 138 (468)
T 1hm9_A 98 L-EGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILT 138 (468)
T ss_dssp H-TTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred h-ccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3 123689999999995 68899999999886543 344433
No 58
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=63.99 E-value=20 Score=32.91 Aligned_cols=98 Identities=11% Similarity=0.124 Sum_probs=56.4
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeC-CCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDD-ssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
+|.++. ..+..++..+.+... ++ |+|+-. ...+... +...+..+.++++.+...+...| -+.++..|+.
T Consensus 29 lpi~gk-pli~~~l~~l~~~gi--~~--Iivv~~~~~~~~i~----~~l~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 98 (295)
T 1lvw_A 29 LPIYDK-PMIYYPLSVLMLAGI--RD--ILIISTPRDLPLYR----DLLGDGSQFGVRFSYRVQEEPRG-IADAFIVGKD 98 (295)
T ss_dssp SEETTE-ETTHHHHHHHHHTTC--CE--EEEEECTTTHHHHH----HHHTTSGGGTSEEEEEECSSCCC-GGGHHHHTHH
T ss_pred cEECCe-eHHHHHHHHHHHCCC--Ce--EEEEeccchHHHHH----HHhhhccccCceEEEeeCCCCCC-hHHHHHHHHH
Confidence 566665 588888888887542 23 444432 2223332 22222112466766654444445 7788888777
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
.. .+.+++++. +|......-+.+++..+.
T Consensus 99 ~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (295)
T 1lvw_A 99 FI--GDSKVALVL-GDNVFYGHRFSEILRRAA 127 (295)
T ss_dssp HH--TTSCEEEEE-TTCCEECTTHHHHHHHHH
T ss_pred Hh--CCCcEEEEE-CCccccCcCHHHHHHHHH
Confidence 52 245666666 998763356777777774
No 59
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=62.41 E-value=15 Score=33.59 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=55.3
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCC-CChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDS-DDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDs-sdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
+|.++. ..+..++..+.+... ++ |+|+-.. +.+...+. ..+..+.++++.+...+...| -++++..|++
T Consensus 28 lpi~gk-pli~~~l~~l~~~gi--~~--I~vv~~~~~~~~i~~~----l~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 97 (293)
T 1fxo_A 28 LPVYDK-PMIYYPLSTLMLAGI--RE--ILIISTPQDTPRFQQL----LGDGSNWGLDLQYAVQPSPDG-LAQAFLIGES 97 (293)
T ss_dssp SEETTE-ETTHHHHHHHHHTTC--CE--EEEEECTTTHHHHHHH----HTTSGGGTCEEEEEECSSCCC-GGGHHHHTHH
T ss_pred CeECCE-eHHHHHHHHHHHCCC--CE--EEEEeccccHHHHHHH----HhcccccCceEEEeeCCCCCC-HHHHHHHHHH
Confidence 566665 588888888887542 22 4444322 22333322 222112466766654444445 7788888877
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
.. .+.+++++. +|......-+.+++..+.
T Consensus 98 ~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 126 (293)
T 1fxo_A 98 FI--GNDLSALVL-GDNLYYGHDFHELLGSAS 126 (293)
T ss_dssp HH--TTSEEEEEE-TTEEEECTTHHHHHHHHH
T ss_pred Hh--CCCCEEEEE-CChhccCccHHHHHHHHH
Confidence 52 233455544 998654356778888774
No 60
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=58.06 E-value=38 Score=32.43 Aligned_cols=87 Identities=18% Similarity=0.195 Sum_probs=55.4
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
....++.+++.+.+..... + |+|+-+ ..+. +++. ..++.++ ....| ...++..|++. .+
T Consensus 30 GkPLi~~~l~~l~~~~~~~-~--IvVvt~-~~~~----i~~~-----~~~v~~v----~~g~g-~~~sv~~aL~~---l~ 88 (371)
T 1w55_A 30 NDPLWLYATKNLSSFYPFK-K--IVVTSS-NITY----MKKF-----TKNYEFI----EGGDT-RAESLKKALEL---ID 88 (371)
T ss_dssp TEEHHHHHHHHHHTTSCCS-C--EEEEES-CHHH----HHTT-----CSSSEEE----ECCSS-HHHHHHHHHTT---CC
T ss_pred CeEHHHHHHHHHHccCCCC-e--EEEEcC-CHHH----HHHH-----hCCCEEE----eCCCC-hHHHHHHHHHh---cC
Confidence 4468899999988643222 3 344433 2222 2211 1124433 22334 67888999985 34
Q ss_pred ccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 312 YEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 312 gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
.|+++++|+|. .++++.+++++..+.++
T Consensus 89 ~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 89 SEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp SSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred CCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 79999999999 56999999999988754
No 61
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=54.06 E-value=71 Score=28.88 Aligned_cols=101 Identities=6% Similarity=-0.021 Sum_probs=55.2
Q ss_pred eEEEEEeccCCc--hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCC--C---
Q 018646 222 MVLVQIPMCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD--G--- 294 (352)
Q Consensus 222 ~VsViIPayNE~--~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~--G--- 294 (352)
.+.|++.+ |+. ..+.-++.|++.-+ +...+.+.|++|+-+++..+.+++..+ ..+.++..+.-.... +
T Consensus 5 ~i~I~~~~-d~~Y~~~~~v~i~Sl~~~~-~~~~~~~~il~~~is~~~~~~L~~~~~---~~~~~i~~~~~~~~~~~~~~~ 79 (276)
T 3tzt_A 5 ADALLLTL-DENYIPQMKVLMTSIYINN-PGRIFDVYLIHSRISEDKLKDLGEDLK---KFSYTLYPIRATDDLFSFAKV 79 (276)
T ss_dssp CEEEEEEC-CGGGHHHHHHHHHHHHHHS-TTCCEEEEEEESCCCHHHHHHHHHHHH---TTTCEEEEEECC---------
T ss_pred eEEEEEEe-CHhHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCCHHHHHHHHHHHH---HcCCEEEEEEeCHHHHhcCcc
Confidence 36666544 443 77778888888743 223578878877766666555555443 334555544332211 1
Q ss_pred ---chHHHH-HHHHhccCCCCccEEEEEcCCCCCChH
Q 018646 295 ---YKAGNL-KSAMNCSYVKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 295 ---~Ka~aL-n~al~~~~~a~gd~V~~lDAD~~~~pd 327 (352)
....+. ...+....+.+.+-|+.+|+|.++..|
T Consensus 80 ~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~d 116 (276)
T 3tzt_A 80 TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINP 116 (276)
T ss_dssp ----CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSC
T ss_pred ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCC
Confidence 000111 111221123468999999999987554
No 62
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=50.77 E-value=25 Score=32.21 Aligned_cols=98 Identities=12% Similarity=0.077 Sum_probs=54.6
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeC-CCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDD-ssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
+|.++. ..+..++..+.+... + +|+|+-. ...+... +...+..+.++++.+...+...| -++++..|+.
T Consensus 29 lpi~gk-pli~~~l~~l~~~gi--~--~I~vv~~~~~~~~i~----~~l~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 98 (296)
T 1mc3_A 29 LPIYDK-PMIYYPLSVLMLAGI--R--EILIITTPEDKGYFQ----RLLGDGSEFGIQLEYAEQPSPDG-LAQAFIIGET 98 (296)
T ss_dssp SEETTE-ETTHHHHHHHHHTTC--C--EEEEEECTTTHHHHH----HHHTTSGGGTCEEEEEECSSCCC-STHHHHHTHH
T ss_pred eEECCe-eHHHHHHHHHHhCCC--C--cEEEEechhHHHHHH----HHHhcccccCceEEEeccCCCCC-HHHHHHHHHH
Confidence 455665 588888888876532 2 3444432 2223332 22222122466766654444445 6778888776
Q ss_pred ccCCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 018646 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (352)
Q Consensus 306 ~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~ 337 (352)
.. .+.+++++. +|......-+.+++..+.
T Consensus 99 ~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (296)
T 1mc3_A 99 FL--NGEPSCLVL-GDNIFFGQGFSPKLRHVA 127 (296)
T ss_dssp HH--TTSCEEEEE-TTEEEECSSCHHHHHHHT
T ss_pred Hh--CCCCEEEEE-CCccccccCHHHHHHHHH
Confidence 52 234566666 998653355677777664
No 63
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=49.61 E-value=56 Score=27.99 Aligned_cols=94 Identities=7% Similarity=0.060 Sum_probs=52.8
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCc
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~g 312 (352)
...++.+++.+.+..... + |+|+-+..... .+++.. ..+..+... ..+.+ ....+..|++.....+.
T Consensus 41 kpli~~~i~~l~~~~~~~-~--ivVv~~~~~~~---~~~~~~----~~~~~~~~~--~gg~~-~~~sv~~al~~~~~~~~ 107 (234)
T 1vpa_A 41 RMLFEYPLSTFLKSEAID-G--VVIVTRREWFE---VVEKRV----FHEKVLGIV--EGGDT-RSQSVRSALEFLEKFSP 107 (234)
T ss_dssp EETTHHHHHHHHHCTTCS-E--EEEEECGGGHH---HHHTTC----CCTTEEEEE--ECCSS-HHHHHHHHHHHHGGGCC
T ss_pred eEHHHHHHHHHHcCCCCC-e--EEEEEChHHHH---HHHHHh----ccCCceEEe--CCCCc-HHHHHHHHHHHhhhcCC
Confidence 358888999888754332 3 44443322211 112111 111222211 11112 55667777775211146
Q ss_pred cEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 313 EFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 313 d~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
|+++++++|. .++++.+.+++..+.++
T Consensus 108 ~~vlv~~~D~Pli~~~~i~~l~~~~~~~ 135 (234)
T 1vpa_A 108 SYVLVHDSARPFLRKKHVSEVLRRARET 135 (234)
T ss_dssp SEEEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred CEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 8999999999 67999999999988653
No 64
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=43.91 E-value=42 Score=29.87 Aligned_cols=92 Identities=11% Similarity=0.152 Sum_probs=49.8
Q ss_pred EeccCCchhHHHHHHHHHc-CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHh
Q 018646 227 IPMCNEKEVYQQSIAAVCN-LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~-qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~ 305 (352)
+|..+. ..++.+|+++.+ .... ++. +|+-...+ ..+.+++...++....+.+.+. .....| -++++..|+.
T Consensus 25 lpv~gk-pli~~~l~~l~~~~gi~--~ii-vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~G-t~~av~~a~~ 96 (255)
T 4evw_A 25 LEAHGQ-TLFEHSVNSFAAYFAST--PFL-FIVRNVYD--TAVFVREKATQLGIKQFYIAEL-HTETRG-QAETVTLGLE 96 (255)
T ss_dssp CEETTE-EHHHHHHGGGGGGTTTS--CEE-EEEESSTT--HHHHHHHHHHHHTCSSEEEEEE-SSCCSS-HHHHHHHHHH
T ss_pred cEECCe-EHHHHHHHHHhccCCCc--eEE-EEECchhh--hHHHHHHHHHHcCCCCceEEEe-CCCCCC-HHHHHHHHHH
Confidence 455554 699999999887 3332 343 33333222 4344443333332122333333 334445 7888888877
Q ss_pred ccC---CCCccEEEEEcCCCCCCh
Q 018646 306 CSY---VKDYEFVAIFDADFQPNP 326 (352)
Q Consensus 306 ~~~---~a~gd~V~~lDAD~~~~p 326 (352)
... ....+-++++.+|+....
T Consensus 97 ~l~~~~~~~~~~~lV~~gD~l~~~ 120 (255)
T 4evw_A 97 ELAKQGVDYQGSITVFNIDTFRPN 120 (255)
T ss_dssp HHHHTTCCCCSCEEECCTTEECTT
T ss_pred HHhhcccCCCCcEEEEeCCEEEec
Confidence 520 023455889999997743
No 65
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=41.86 E-value=1.2e+02 Score=29.04 Aligned_cols=110 Identities=13% Similarity=0.110 Sum_probs=59.3
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhh--------hcCCeEEEeecc----C-CC
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ--------EAGANIVYRHRI----L-RD 293 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~--------~~~v~ii~~~r~----~-~~ 293 (352)
+|..+....++.+++.+.+.... + |+|+-....+...+.+.+ .+. ...+++...... . ..
T Consensus 46 lpi~g~~pli~~~l~~l~~~g~~--~--i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 118 (451)
T 1yp2_A 46 VPLGANYRLIDIPVSNCLNSNIS--K--IYVLTQFNSASLNRHLSR---AYASNMGGYKNEGFVEVLAAQQSPENPDWFQ 118 (451)
T ss_dssp CEETTTEETTHHHHHHHHHTTCC--E--EEEEESCCCHHHHHHHHH---HCC--------CCEEEEEESCSSTTSCCCCC
T ss_pred eEECCcceeHHHHHHHHHHCCCC--E--EEEEeccCHHHHHHHHhh---hhhcccccccccCcEEEeccccccccccccc
Confidence 45556546888889888876422 3 444444444444333321 110 001233321111 1 13
Q ss_pred CchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC-CcEEEE
Q 018646 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT-KLIGFF 345 (352)
Q Consensus 294 G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d-p~vg~V 345 (352)
| -++++..++........+.++++.+|.+.+.+ +.+++..+.++ ..+.++
T Consensus 119 G-t~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~~~~~~tl~ 169 (451)
T 1yp2_A 119 G-TADAVRQYLWLFEEHTVLEYLILAGDHLYRMD-YEKFIQAHRETDADITVA 169 (451)
T ss_dssp S-HHHHHHHTHHHHTTSCCSEEEEECSCEECCCC-HHHHHHHHHHTTCSEEEE
T ss_pred C-cHHHHHHHHHHHHhcCCCeEEEecCcEEEcCC-HHHHHHHHHHcCCcEEEE
Confidence 4 77888887765311235889999999976654 67888776543 344443
No 66
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=39.23 E-value=2e+02 Score=25.33 Aligned_cols=51 Identities=12% Similarity=0.161 Sum_probs=37.7
Q ss_pred CchHHHHHHHHhccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEE
Q 018646 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFF 345 (352)
Q Consensus 294 G~Ka~aLn~al~~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~V 345 (352)
++-+..++.|++......++-|+++-+|. .+.++.|.++...+.+ .++.++
T Consensus 85 ~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~-~d~Vig 136 (242)
T 3cgx_A 85 LDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH-YDAAIG 136 (242)
T ss_dssp SSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT-CSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc-CCeEEE
Confidence 34888888888753223567899999999 5799999999998875 444443
No 67
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=38.63 E-value=86 Score=29.72 Aligned_cols=110 Identities=9% Similarity=0.075 Sum_probs=58.2
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhh----cCCeEEEeecc----CC---CCc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE----AGANIVYRHRI----LR---DGY 295 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~----~~v~ii~~~r~----~~---~G~ 295 (352)
+|..+....++.+++.+.+.... + |+|+-+...+...+.++. .+.. ....+.++... .. .|
T Consensus 38 lpi~gk~pli~~~l~~l~~~gi~--~--i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~v~i~~~~~~~~~~~~~~G- 109 (420)
T 3brk_X 38 VYFGGKARIIDFALSNALNSGIR--R--IGVATQYKAHSLIRHLQR---GWDFFRPERNESFDILPASQRVSETQWYEG- 109 (420)
T ss_dssp SEETTTEETHHHHHHHHHHTTCC--E--EEEEECTTCHHHHHHHHH---HSCCCCGGGTCEEEEECCC-------CCCC-
T ss_pred cccCCCCcHHHHHHHHHHhCCCC--e--EEEEeCCChHHHHHHHhh---hhccccccccCCEEEeCccccccCCccccC-
Confidence 45555546888999998886422 3 444444444444433321 1210 00122222211 11 34
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhcC-CcEEEE
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKVT-KLIGFF 345 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~d-p~vg~V 345 (352)
-++++..++......+.+.++++.+|.+.+.+ +.+++..+.++ .++.++
T Consensus 110 t~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~~~~~~tl~ 159 (420)
T 3brk_X 110 TADAVYQNIDIIEPYAPEYMVILAGDHIYKMD-YEYMLQQHVDSGADVTIG 159 (420)
T ss_dssp HHHHHHTTHHHHHHHCCSEEEEEESSCEECBC-THHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEecccEEEchH-HHHHHHHHHHcCCeEEEE
Confidence 77888877764211134789999999965554 67777776543 344333
No 68
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=38.10 E-value=1.4e+02 Score=25.63 Aligned_cols=42 Identities=21% Similarity=0.137 Sum_probs=29.2
Q ss_pred CCchHHHHHHHHhccCCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 018646 293 DGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKV 338 (352)
Q Consensus 293 ~G~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~~pd~L~~lv~~f~~ 338 (352)
.| -++++..++... ...+.++++.+|.+.+ .-+.+++..+.+
T Consensus 106 ~g-t~~al~~a~~~~--~~~~~~lv~~~D~~~~-~~~~~~~~~~~~ 147 (259)
T 1tzf_A 106 SM-TGGRLKRVAEYV--KDDEAFLFTYGDGVAD-LDIKATIDFHKA 147 (259)
T ss_dssp CC-HHHHHHHTGGGT--TTSSCEEEEETTEEEC-CCHHHHHHHHHH
T ss_pred cC-cHHHHHHHHHhc--CCCCcEEEEECCEecc-cCHHHHHHHHHH
Confidence 34 778888887752 2357788889999654 457788877753
No 69
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=34.05 E-value=2.1e+02 Score=23.92 Aligned_cols=78 Identities=10% Similarity=0.115 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCCcc
Q 018646 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (352)
Q Consensus 234 ~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~gd 313 (352)
..++.+++.+.+. .++ |+|+-+.... +. + . +++++.. .....| -.+++..|++. .+.+
T Consensus 41 pll~~~l~~l~~~---~~~--i~vv~~~~~~------~~----~-~-~~~~v~~-~~~~~g-~~~~i~~al~~---~~~~ 98 (201)
T 2e8b_A 41 KVIERVYETAKSV---FKE--VYIVAKDREK------FS----F-L-NAPVVLD-EFEESA-SIIGLYTALKH---AKEE 98 (201)
T ss_dssp HHHHHHHHHHHTT---CSE--EEEEESCSGG------GG----G-G-TCCEEEC-CCSSCC-HHHHHHHHHHH---CSSS
T ss_pred EHHHHHHHHHHHh---CCE--EEEEeCcHHH------hh----c-C-CceEEec-CCCCCC-cHHHHHHHHHH---cCCC
Confidence 4677778877765 223 3443332221 10 1 1 4555422 223345 88889999985 3468
Q ss_pred EEEEEcCCCC-CChHHHHH-HH
Q 018646 314 FVAIFDADFQ-PNPDFLRR-TV 333 (352)
Q Consensus 314 ~V~~lDAD~~-~~pd~L~~-lv 333 (352)
.++++++|.- ++++.+++ ++
T Consensus 99 ~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 99 NVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEEEEETTCTTCCHHHHHHHHH
T ss_pred CEEEEeCCcCcCCHHHHHHHHh
Confidence 9999999995 58999988 77
No 70
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=31.77 E-value=76 Score=29.04 Aligned_cols=88 Identities=14% Similarity=0.115 Sum_probs=46.4
Q ss_pred hhHHHHHHHH-HcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCC--------CCc-hHHHH-HH
Q 018646 234 EVYQQSIAAV-CNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR--------DGY-KAGNL-KS 302 (352)
Q Consensus 234 ~vl~~tL~sl-~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~--------~G~-Ka~aL-n~ 302 (352)
..+.-++.|+ +..+ + ..+.++|++|+-+++..+.+++.... .+..+..+.-... .+. ...+. ..
T Consensus 13 ~~~~vli~Sl~l~~~-~-~~~~f~il~~~ls~~~~~~L~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 87 (311)
T 1g9r_A 13 AYLCVAAKSVEAAHP-D-TEIRFHVLDAGISEANRAAVAANLRG---GGGNIRFIDVNPEDFAGFPLNIRHISITTYARL 87 (311)
T ss_dssp HHHHHHHHHHHHTCT-T-SCCEEEEEESSCCHHHHHHHHHHSGG---GTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGG
T ss_pred HHHHHHHHHHHHHcC-C-CCceEEEEECCCCHHHHHHHHHHHHH---cCCEEEEEEcCHHHHhcCccccccCCHHHHHHH
Confidence 6677788898 6543 2 34777777777666665555544322 2344433321110 010 00010 00
Q ss_pred HHhccCCCCccEEEEEcCCCCCChH
Q 018646 303 AMNCSYVKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 303 al~~~~~a~gd~V~~lDAD~~~~pd 327 (352)
.+... ..+.|-|+++|+|.++..|
T Consensus 88 ~l~~l-l~~~~kvlyLD~D~iv~~d 111 (311)
T 1g9r_A 88 KLGEY-IADCDKVLYLDIDVLVRDS 111 (311)
T ss_dssp GHHHH-CCSCSCEEEECSSEEECSC
T ss_pred HHHHH-hhhcCEEEEEcCCeEeccC
Confidence 11111 1477999999999988665
No 71
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=31.31 E-value=68 Score=27.51 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=48.7
Q ss_pred chhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCC-CCchHHHHHHHHhccCCCC
Q 018646 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR-DGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 233 ~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~-~G~Ka~aLn~al~~~~~a~ 311 (352)
...++.+++.+.+. . ++ |+|+- ...+...+. +.+ ..+.++.++..... .| -.+++..|++. .+
T Consensus 45 ~pli~~~l~~l~~~-~--~~--i~vv~-~~~~~~~~~---~~~---~~~~~~~~v~~~~~~~g-~~~~i~~a~~~---~~ 108 (232)
T 2xme_A 45 CEIILRTMKLLSPH-V--SE--FIIVA-SRYADDIDA---FLK---DKGFNYKIVRHDRPEKG-NGYSLLVAKNH---VE 108 (232)
T ss_dssp EEHHHHHHHHHGGG-E--EE--EEEEE-STTHHHHHH---HHT---TSCCCEEEEECSCGGGC-HHHHHHTTGGG---CC
T ss_pred EEHHHHHHHHHHHh-C--CE--EEEEe-CChHHHHHH---HHH---hcCCcEEEEECCCCCCC-cHHHHHHHHHH---CC
Confidence 36888899888775 2 23 33333 333333221 111 22334444433222 34 67788888875 23
Q ss_pred ccEEEEEcCCCCCChHHHHHHHH
Q 018646 312 YEFVAIFDADFQPNPDFLRRTVP 334 (352)
Q Consensus 312 gd~V~~lDAD~~~~pd~L~~lv~ 334 (352)
+.++++.+|...+++.+++++.
T Consensus 109 -~~~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 109 -DRFILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp -SSEEEEETTEEECHHHHHHHTT
T ss_pred -CCEEEEcCCcccCHHHHHHHHh
Confidence 3456788998778888888765
No 72
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=30.98 E-value=1.4e+02 Score=27.76 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=50.6
Q ss_pred EeccCCchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhc
Q 018646 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (352)
Q Consensus 227 IPayNE~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~ 306 (352)
+|..++...++.++..+.+..-. +++ +++++....+ .+++...... ..+++ ..+...| .+.++..+...
T Consensus 28 l~l~g~~pli~~~l~~l~~~~~~-~~i-ivvt~~~~~~----~i~~~l~~~~--~~~ii--~e~~~~g-ta~ai~~a~~~ 96 (336)
T 2x65_A 28 LKLFGNKSLMRWTFERVLEEMDP-KDV-IVVTHKDYVE----RTKKELPELP--DENII--AEPMKKN-TAPACFIGTKL 96 (336)
T ss_dssp CCCBTTBCHHHHHHHHHHTTCCG-GGE-EEEEEGGGHH----HHHHHCTTSC--GGGEE--EESSCCC-HHHHHHHHHTT
T ss_pred EECCCCCcHHHHHHHHHhccCCC-CcE-EEEcChHHHH----HHHHHhhccc--cceEE--eCCCCCC-cHHHHHHHHHh
Confidence 45666567999999999875222 233 3444332111 2222211111 12333 2334445 77888877764
Q ss_pred cCCCCccEEEEEcCCCCC-ChHHHHHH
Q 018646 307 SYVKDYEFVAIFDADFQP-NPDFLRRT 332 (352)
Q Consensus 307 ~~~a~gd~V~~lDAD~~~-~pd~L~~l 332 (352)
....+.++++.+|+.. .++.+.++
T Consensus 97 --~~~~~~~lvl~~D~~~~~~~~~~~~ 121 (336)
T 2x65_A 97 --ADDDEPVLVLPADHRIPDTKKFWKT 121 (336)
T ss_dssp --SCTTCEEEEEETTCBCCCHHHHHHH
T ss_pred --hCCCCEEEEEcCCceeccHHHHHHH
Confidence 2345889999999976 45443333
No 73
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=29.42 E-value=1.5e+02 Score=25.42 Aligned_cols=87 Identities=11% Similarity=0.110 Sum_probs=55.2
Q ss_pred CchhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCchHHHHHHHHhccCCCC
Q 018646 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (352)
Q Consensus 232 E~~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~Ka~aLn~al~~~~~a~ 311 (352)
....++.+++.+.+... +|+|+-+. +.. ++ ..++++ ....| ..+++..|++. .+
T Consensus 31 g~pll~~~l~~l~~~~~-----~ivvv~~~--~~i----~~------~~~~~~-----~~~~g-~~~~i~~a~~~---~~ 84 (232)
T 2dpw_A 31 GRPMVEWVLEALYAAGL-----SPVYVGEN--PGL----VP------APALTL-----PDRGG-LLENLEQALEH---VE 84 (232)
T ss_dssp TEETHHHHHHHHHHTTC-----EEEEESCC--SSC----SS------CCSEEE-----CCCSS-HHHHHHHHHHT---CC
T ss_pred CEEHHHHHHHHHHhcCC-----EEEEEeCh--HHH----hh------hcCeEe-----cCCCC-HHHHHHHHHHH---cC
Confidence 34688899999887632 45555222 221 11 013332 33345 78889999985 23
Q ss_pred ccEEEEEcCCCC-CChHHHHHHHHHHhcCCcEEEEE
Q 018646 312 YEFVAIFDADFQ-PNPDFLRRTVPHFKVTKLIGFFL 346 (352)
Q Consensus 312 gd~V~~lDAD~~-~~pd~L~~lv~~f~~dp~vg~Vq 346 (352)
+.++++++|.- +.++.+++++. +..+.++.+..
T Consensus 85 -~~~lv~~~D~P~~~~~~i~~l~~-~~~~~~~~~~~ 118 (232)
T 2dpw_A 85 -GRVLVATGDIPHLTEEAVRFVLD-KAPEAALVYPI 118 (232)
T ss_dssp -SEEEEEETTCTTCCHHHHHHHHH-HCCSCSEEEEE
T ss_pred -CCEEEEeCCcccCCHHHHHHHHh-cCCCCCEEEEE
Confidence 89999999995 68999999998 44334444433
No 74
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=29.30 E-value=1.9e+02 Score=26.77 Aligned_cols=90 Identities=8% Similarity=0.008 Sum_probs=44.3
Q ss_pred ccCCc--hhHHHHHHHHHcCCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeeccCCCCc-hHHH-----H
Q 018646 229 MCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY-KAGN-----L 300 (352)
Q Consensus 229 ayNE~--~vl~~tL~sl~~qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~~~~G~-Ka~a-----L 300 (352)
+.|+. ....-++.|+...+ +...+.| +++|+-++...+.++ ..+..++.+........ +... .
T Consensus 10 ~~d~~Yl~~a~vl~~SL~~~~-s~~~l~v-lv~~~is~~~~~~L~-------~~~~~v~~v~~l~~~~~~~~~~~~~~~~ 80 (333)
T 1ll2_A 10 TTNDAYAKGALVLGSSLKQHR-TSRRLAV-LTTPQVSDTMRKALE-------IVFDEVITVDILDSGDSAHLTLMKRPEL 80 (333)
T ss_dssp ESSHHHHHHHHHHHHHHHHTT-CCSEEEE-EECTTSCHHHHHHHH-------HHCSEEEECCTTSTTSTTHHHHHHCGGG
T ss_pred EeCHHHHHHHHHHHHHHHHhC-CCCCEEE-EEcCCCCHHHHHHHH-------HhCCEEEEEeecCCcchhhcccccccch
Confidence 35654 45555677777643 3334544 566655555444443 22345554433222110 1000 0
Q ss_pred HHHHhcc---CCCCccEEEEEcCCCCCChH
Q 018646 301 KSAMNCS---YVKDYEFVAIFDADFQPNPD 327 (352)
Q Consensus 301 n~al~~~---~~a~gd~V~~lDAD~~~~pd 327 (352)
...+.+. ...++|-|+++|+|+++-.|
T Consensus 81 ~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 81 GVTLTKLHCWSLTQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp HHHHHHGGGGGCTTCSEEEEECTTEEECSC
T ss_pred HHHHHHHHHhHhcCCCeEEEEeCCEEeccC
Confidence 1111111 12578999999999987544
No 75
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=24.99 E-value=1.5e+02 Score=25.64 Aligned_cols=41 Identities=7% Similarity=0.156 Sum_probs=34.0
Q ss_pred hHHHHHHHHhccCCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKVT 339 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~d 339 (352)
...++..|++. .+.++++++++|. .++++.+++++..+.++
T Consensus 93 ~~~~i~~al~~---~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2px7_A 93 RQASVARLLEA---ASLPLVLVHDVARPFVSRGLVARVLEAAQRS 134 (236)
T ss_dssp HHHHHHHHHHH---CCSSEEEECCTTCCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH---cCCCeEEEecCccccCCHHHHHHHHHHHHhc
Confidence 67888889885 3478999999997 57999999999988653
No 76
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=23.61 E-value=3.2e+02 Score=24.50 Aligned_cols=39 Identities=10% Similarity=-0.058 Sum_probs=27.1
Q ss_pred CCccEEEEEcCCC-CCChHHHHHHHHHHhcCCcEEEEEec
Q 018646 310 KDYEFVAIFDADF-QPNPDFLRRTVPHFKVTKLIGFFLFE 348 (352)
Q Consensus 310 a~gd~V~~lDAD~-~~~pd~L~~lv~~f~~dp~vg~Vqtr 348 (352)
.++|.|++.|... .+.++.++.+..+.++--.+-++.++
T Consensus 49 ~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgLi~~gG~ 88 (259)
T 3rht_A 49 AKQDLVILSDYPAERMTAQAIDQLVTMVKAGCGLVMLGGW 88 (259)
T ss_dssp HTCSEEEEESCCGGGBCHHHHHHHHHHHHTTCEEEEECST
T ss_pred hcCCEEEEcCCccccCCHHHHHHHHHHHHhCCeEEEecCc
Confidence 3799999998775 57888888888888753334334333
No 77
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=22.59 E-value=4.5e+02 Score=25.04 Aligned_cols=116 Identities=16% Similarity=0.093 Sum_probs=63.6
Q ss_pred EEEEEeccCCc--hhHHHHHHHHHc---CCCCCCeeEEEEEeCCCChhHHHHHHHHHHHhhhcCCeEEEeecc--CCCCc
Q 018646 223 VLVQIPMCNEK--EVYQQSIAAVCN---LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--LRDGY 295 (352)
Q Consensus 223 VsViIPayNE~--~vl~~tL~sl~~---qdyP~~~leIiVvDDssdd~t~~li~~~~~~~~~~~v~ii~~~r~--~~~G~ 295 (352)
+.+|.|.+..- +.+.+.++...+ +.... -.|.|+=+|.-..|+.+++...+...+.|+..+...-. ....
T Consensus 233 i~~I~P~HGpi~r~~~~~ii~~Y~~w~~~~~~~--~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~- 309 (410)
T 4dik_A 233 IKALLPGHGLIWKKDPQRLLNHYVSVAKGDPKK--GKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPA- 309 (410)
T ss_dssp CSEEEESSSCBBSSCHHHHHHHHHHHHHTCCCT--TEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCCC-
T ss_pred CCEEecCCcchhhcCHHHHHHHHHHhhcccccc--cceeeEEecccChHHHHHHHHHHHHHhcCCceEEEEeccCCCCC-
Confidence 46678887753 445555554433 33333 24777788888888888887777777788876543222 2222
Q ss_pred hHHHHHHHHhccCCCCccEEEE----EcCCCCCC-hHHHHHHHHHHhcCCcEEEEEe
Q 018646 296 KAGNLKSAMNCSYVKDYEFVAI----FDADFQPN-PDFLRRTVPHFKVTKLIGFFLF 347 (352)
Q Consensus 296 Ka~aLn~al~~~~~a~gd~V~~----lDAD~~~~-pd~L~~lv~~f~~dp~vg~Vqt 347 (352)
... .++. ..+++-+++ .+++..++ .++|..+...-..+..+++.++
T Consensus 310 ~s~----i~~~--i~~~~~ivlGspT~~~~~~p~~~~~l~~l~~~~~~~K~~~~FGS 360 (410)
T 4dik_A 310 ISE----ILKD--IPDSEALIFGVSTYEAEIHPLMRFTLLEIIDKANYEKPVLVFGV 360 (410)
T ss_dssp HHH----HHHH--STTCSEEEEEECCTTSSSCHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_pred HHH----HHHH--HHhCCeEEEEeCCcCCcCCHHHHHHHHHHHhcccCCCEEEEEEC
Confidence 222 2221 234555555 45554332 2355555544333455666665
No 78
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=20.56 E-value=2.2e+02 Score=24.97 Aligned_cols=58 Identities=12% Similarity=0.010 Sum_probs=36.9
Q ss_pred HHHHHHHHhhhcCCeEEEeeccCCCC-------chHHHHHHHHhccCCCCccEEEEEcCCCCC-ChHH
Q 018646 269 LIKEEVLKWQEAGANIVYRHRILRDG-------YKAGNLKSAMNCSYVKDYEFVAIFDADFQP-NPDF 328 (352)
Q Consensus 269 li~~~~~~~~~~~v~ii~~~r~~~~G-------~Ka~aLn~al~~~~~a~gd~V~~lDAD~~~-~pd~ 328 (352)
.+++..+-+...|..+.+..-..... .|...+.++|.. -.+.||+.-+|+|..+ +.++
T Consensus 25 siKNK~DYArrHGYelfy~d~~l~k~~e~a~eW~ksW~IR~AM~k--hPeAEWfWWLDsDAlIMDmnf 90 (213)
T 2p6w_A 25 TKELVEEYCSIHGYNFYYEESEPLETEEHALHFRRSWIIQQAAEK--FPSTEWFLWLDSDVYVNPKNK 90 (213)
T ss_dssp HHHHHHHHHHHHTCEEEEECSCCSCCSHHHHHHTHHHHHHHHHHH--CTTCSEEEEECTTEEECGGGT
T ss_pred HHHHHHHHHHHcCCeEEEeecccccchhhcccchhhHHHHHHHHH--CCCceEEEEecCCceeecCCC
Confidence 33444444557788877653222111 245578888886 4789999999999965 4554
Done!