Your job contains 1 sequence.
>018647
MSAKHLNTYYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEI
IAEVNSELADLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTGSPPSAF
QIPYDSFREHSDSSETDHSYERNSSAGASDTNPKDLDYDFMCFFLSSHRLDLYRSIDLRC
EDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIGYRQAMEYLLRCRQQGGTSSTGEFYAF
LAEFQKASRNFAKRQLTWFRNERIYHWLNAARPLENVLNYIITAYHDSTGTLVVPDYLQI
RRDSSSSREVSELKSYRTRNRHFISRGDCCNILDWIKRTQGKTCELREPIVV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018647
(352 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|GSU_2000 - symbol:GSU_2000 "tRNA delta(2)-isopen... 144 1.5e-17 2
DICTYBASE|DDB_G0274017 - symbol:iptC-2 "putative isopente... 229 4.0e-17 1
DICTYBASE|DDB_G0273039 - symbol:iptC-1 "putative isopente... 229 4.0e-17 1
TIGR_CMR|CHY_1394 - symbol:CHY_1394 "tRNA delta(2)-isopen... 135 1.9e-16 2
TIGR_CMR|ECH_0588 - symbol:ECH_0588 "tRNA delta(2)-isopen... 149 3.4e-12 2
TIGR_CMR|CPS_0324 - symbol:CPS_0324 "tRNA delta(2)-isopen... 126 2.2e-10 2
TIGR_CMR|APH_0431 - symbol:APH_0431 "tRNA delta(2)-isopen... 127 5.1e-10 2
TIGR_CMR|NSE_0570 - symbol:NSE_0570 "tRNA delta(2)-isopen... 102 1.1e-08 2
TIGR_CMR|CBU_1082 - symbol:CBU_1082 "tRNA delta(2)-isopen... 153 1.9e-08 1
TIGR_CMR|DET_0741 - symbol:DET_0741 "tRNA delta(2)-isopen... 104 2.7e-08 2
SGD|S000005800 - symbol:MOD5 "Delta 2-isopentenyl pyropho... 121 1.4e-07 2
UNIPROTKB|Q97RW5 - symbol:miaA "tRNA dimethylallyltransfe... 141 3.9e-07 1
UNIPROTKB|P16384 - symbol:miaA "tRNA(i6A37) synthase" spe... 130 8.6e-06 1
UNIPROTKB|P65352 - symbol:miaA "tRNA dimethylallyltransfe... 89 1.0e-05 2
UNIPROTKB|Q9KV12 - symbol:miaA "tRNA dimethylallyltransfe... 129 1.1e-05 1
TIGR_CMR|VC_0346 - symbol:VC_0346 "tRNA delta(2)-isopente... 129 1.1e-05 1
TIGR_CMR|BA_3843 - symbol:BA_3843 "tRNA delta(2)-isopente... 128 1.4e-05 1
POMBASE|SPAC343.15 - symbol:tit1 "tRNA isopentenyltransfe... 118 7.3e-05 2
TIGR_CMR|SO_0602 - symbol:SO_0602 "tRNA delta(2)-isopente... 120 0.00011 1
CGD|CAL0005287 - symbol:orf19.4801 species:5476 "Candida ... 122 0.00014 1
>TIGR_CMR|GSU_2000 [details] [associations]
symbol:GSU_2000 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:243231 "Geobacter sulfurreducens PCA"
[GO:0006400 "tRNA modification" evidence=ISS] HAMAP:MF_00185
InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008033
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 HOGENOM:HOG000039995 ProtClustDB:PRK00091
OMA:TWFRRDP RefSeq:NP_953049.1 ProteinModelPortal:Q74BP1
GeneID:2686109 KEGG:gsu:GSU2000 PATRIC:22026861
BioCyc:GSUL243231:GH27-2034-MONOMER Uniprot:Q74BP1
Length = 311
Score = 144 (55.7 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 41/114 (35%), Positives = 58/114 (50%)
Query: 155 DLDYDFMCFFLSSHRLDLYRSIDLRCEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIG 214
D YD + +S R DLYR I+ R M ++G + E + LL+ G P+ A AIG
Sbjct: 192 DEPYDCLKLGISVERDDLYRRINERVNRMF--AEGFVEEVSGLLNAGYSPDLK-AMGAIG 248
Query: 215 YRQAMEYLLRCRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLTWFRNERIYHWL 268
Y++ YL GT S E + Q+ +R +AKRQLTWFR + W+
Sbjct: 249 YKEVCAYL------AGTCSLDEARELV---QRNTRRYAKRQLTWFRKDPAIKWV 293
Score = 135 (52.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 42/135 (31%), Positives = 65/135 (48%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
++ + +A ++ +G+ PI+ GGTGLY++ I G P A I AE+
Sbjct: 78 FTAADYRREAGRVITEIHSRGKRPILVGGTGLYIKTLIGGLAPSPGADDTIRAELEE--- 134
Query: 70 DLQRDGDWYAAVEFVVKAGDPKARS-LAANDWYRLRRSLEIIKSTGSPPSAFQIPYDSFR 128
D + +G AA+ + DP A + L ND R+ R+LE+ TG P S FQ +
Sbjct: 135 DARSEGA--AALHDRLAQVDPAAAARLHPNDRVRIVRALEVFLMTGKPLSEFQEEHRFAD 192
Query: 129 EHSDSSETDHSYERN 143
E D + S ER+
Sbjct: 193 EPYDCLKLGISVERD 207
Score = 45 (20.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 47 IYGKPDV--PKASPEIIAEVNSELADLQRDGDWYAAVEFVVKAG 88
+Y D+ K SPE++A V L D+ + A ++ +AG
Sbjct: 45 VYRGMDIGTAKPSPELVARVPHHLYDIVDPDVNFTAADYRREAG 88
>DICTYBASE|DDB_G0274017 [details] [associations]
symbol:iptC-2 "putative isopentenyltransferase C"
species:44689 "Dictyostelium discoideum" [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00185 InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 dictyBase:DDB_G0274017
dictyBase:DDB_G0273039 GO:GO:0005524 GO:GO:0016740
GenomeReviews:CM000151_GR EMBL:AAFI02000011 EMBL:AAFI02000009
GO:GO:0008033 eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791
TIGRFAMs:TIGR00174 RefSeq:XP_644367.1 RefSeq:XP_645047.1
ProteinModelPortal:Q556J1 STRING:Q556J1 EnsemblProtists:DDB0233671
EnsemblProtists:DDB0266927 GeneID:8618723 GeneID:8619253
KEGG:ddi:DDB_G0273039 KEGG:ddi:DDB_G0274017 OMA:LAANDWY
ProtClustDB:CLSZ2431079 Uniprot:Q556J1
Length = 413
Score = 229 (85.7 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 81/284 (28%), Positives = 137/284 (48%)
Query: 15 FFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELADLQRD 74
++ A++ KDVL +GRVPIV GG G YL + G V + + E+ ++++
Sbjct: 87 YYRLAKNTIKDVLSRGRVPIVVGGCGFYLDTILKGSR-VDLTNDKERDEIKLYYNKIKQE 145
Query: 75 GDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTGSPPSAFQIPYDSFREHSDSS 134
+W + + K A + ND+ RL +SL +++ + S+
Sbjct: 146 DNWDYYYDLLKKYDIESANMILKNDFIRLSKSLY---------------FNTVKGVKFST 190
Query: 135 ETDHSYERNSSAGASDTNPKDLDYDFMCFFLSSHRLDLYRSIDLRCEDMLPGSDGILSEA 194
+ D Y+ +S A +YDF F+LS R ++ +++ RCE M GIL E
Sbjct: 191 QKD-DYQ-DSIAN---------EYDFRTFYLSGDRSKMHITLNNRCESMF--KMGILEEV 237
Query: 195 AWLL--DEGLLPNSNSATRAIGYRQAMEYLLR--CRQQGGTS----------STGEFYAF 240
LL D+ L ++ ++ +IGYRQ M+ LL+ R TS + +
Sbjct: 238 YDLLKRDKDLHFKNSKSSESIGYRQIMDLLLKPVVRNIDDTSINMNQSLNAIDESDVIST 297
Query: 241 LAEFQKASRNFAKRQLTWFRNERIYHWLNAARPLEN-VLN-YII 282
+ FQ A+RN+ ++Q +WF+ E+ + WLN P++N + N YII
Sbjct: 298 ILNFQTANRNYYRKQYSWFKKEKYFEWLN---PIDNEITNQYII 338
>DICTYBASE|DDB_G0273039 [details] [associations]
symbol:iptC-1 "putative isopentenyltransferase C"
species:44689 "Dictyostelium discoideum" [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00185 InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 dictyBase:DDB_G0274017
dictyBase:DDB_G0273039 GO:GO:0005524 GO:GO:0016740
GenomeReviews:CM000151_GR EMBL:AAFI02000011 EMBL:AAFI02000009
GO:GO:0008033 eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791
TIGRFAMs:TIGR00174 RefSeq:XP_644367.1 RefSeq:XP_645047.1
ProteinModelPortal:Q556J1 STRING:Q556J1 EnsemblProtists:DDB0233671
EnsemblProtists:DDB0266927 GeneID:8618723 GeneID:8619253
KEGG:ddi:DDB_G0273039 KEGG:ddi:DDB_G0274017 OMA:LAANDWY
ProtClustDB:CLSZ2431079 Uniprot:Q556J1
Length = 413
Score = 229 (85.7 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 81/284 (28%), Positives = 137/284 (48%)
Query: 15 FFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELADLQRD 74
++ A++ KDVL +GRVPIV GG G YL + G V + + E+ ++++
Sbjct: 87 YYRLAKNTIKDVLSRGRVPIVVGGCGFYLDTILKGSR-VDLTNDKERDEIKLYYNKIKQE 145
Query: 75 GDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTGSPPSAFQIPYDSFREHSDSS 134
+W + + K A + ND+ RL +SL +++ + S+
Sbjct: 146 DNWDYYYDLLKKYDIESANMILKNDFIRLSKSLY---------------FNTVKGVKFST 190
Query: 135 ETDHSYERNSSAGASDTNPKDLDYDFMCFFLSSHRLDLYRSIDLRCEDMLPGSDGILSEA 194
+ D Y+ +S A +YDF F+LS R ++ +++ RCE M GIL E
Sbjct: 191 QKD-DYQ-DSIAN---------EYDFRTFYLSGDRSKMHITLNNRCESMF--KMGILEEV 237
Query: 195 AWLL--DEGLLPNSNSATRAIGYRQAMEYLLR--CRQQGGTS----------STGEFYAF 240
LL D+ L ++ ++ +IGYRQ M+ LL+ R TS + +
Sbjct: 238 YDLLKRDKDLHFKNSKSSESIGYRQIMDLLLKPVVRNIDDTSINMNQSLNAIDESDVIST 297
Query: 241 LAEFQKASRNFAKRQLTWFRNERIYHWLNAARPLEN-VLN-YII 282
+ FQ A+RN+ ++Q +WF+ E+ + WLN P++N + N YII
Sbjct: 298 ILNFQTANRNYYRKQYSWFKKEKYFEWLN---PIDNEITNQYII 338
>TIGR_CMR|CHY_1394 [details] [associations]
symbol:CHY_1394 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0006400 "tRNA modification" evidence=ISS]
HAMAP:MF_00185 InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0008033
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 HOGENOM:HOG000039995 RefSeq:YP_360226.1
ProteinModelPortal:Q3ACA8 SMR:Q3ACA8 STRING:Q3ACA8 GeneID:3726463
KEGG:chy:CHY_1394 PATRIC:21275919 OMA:TWFRRDP
BioCyc:CHYD246194:GJCN-1393-MONOMER Uniprot:Q3ACA8
Length = 311
Score = 135 (52.6 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 36/111 (32%), Positives = 60/111 (54%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YSV F ++AR K++ ++G++PI+ GGTGLY+R I D S + + E A
Sbjct: 72 YSVALFQKEARRLIKEINERGKIPIIVGGTGLYIRSVI-DPYDFTDFSFDPVFRGKLEQA 130
Query: 70 DLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTGSPPSAF 120
++ G Y + + K A+ + +ND R+ R+LE+ + TG P S +
Sbjct: 131 AKEK-GSSYLH-QMLEKIDPVAAQKIHSNDLRRIIRALEVYEHTGKPISYY 179
Score = 135 (52.6 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 158 YDFMCFFLSSHRLDLYRSIDLRCEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIGYRQ 217
Y + + L+ R LY+ I+ R + M+ G+++E LL G ++A +A+GY++
Sbjct: 190 YRLLYYGLTMDRALLYQRINERVDKMI--EKGLIAEVKRLLQMGF--KESTAMQALGYKE 245
Query: 218 AMEYLLRCRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLTWFRNERIYHWLNAARP-LEN 276
++YL +G + Y ++ +R FAKRQLTWFR + W ++ + LE
Sbjct: 246 IVQYL-----EGKITLDEAIYLI----KRDTRRFAKRQLTWFRRDPRIKWFDSGKESLEK 296
Query: 277 VLNYIIT 283
+ IIT
Sbjct: 297 ITEKIIT 303
>TIGR_CMR|ECH_0588 [details] [associations]
symbol:ECH_0588 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00185 InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008033 eggNOG:COG0324
PANTHER:PTHR11088 KO:K00791 GO:GO:0052381 TIGRFAMs:TIGR00174
HOGENOM:HOG000039996 ProtClustDB:CLSK749553 OMA:TWFRRDP
RefSeq:YP_507399.1 ProteinModelPortal:Q2GGN4 STRING:Q2GGN4
GeneID:3928069 KEGG:ech:ECH_0588 PATRIC:20576634
BioCyc:ECHA205920:GJNR-590-MONOMER Uniprot:Q2GGN4
Length = 303
Score = 149 (57.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 33/105 (31%), Positives = 59/105 (56%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YSVG + ED + ++++ + P++TGG+G+Y+ IYG +PK + E
Sbjct: 70 YSVGLWIEDLKDEISSIIQQKKFPVITGGSGMYINSLIYGLSQIPKIEDSVRNETRRLFK 129
Query: 70 DLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTG 114
L + ++YA + + K DP A+ L N+ ++L R+ E+I+ TG
Sbjct: 130 TLGKK-EFYALL--IDK--DPIAKCLHKNNSHQLLRAYEVIEQTG 169
Score = 77 (32.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 159 DFMCFFLSSHRLDLYRSIDLRCEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIGYRQA 218
+F L R ++Y+ I+ R +M+ S ++ E LL + P A +A G +
Sbjct: 187 NFKLCILMPPRSEIYKKINERFINMINTS--VIEEIENLLSLNI-PAHFPAMKAHGVPEI 243
Query: 219 MEYLLRCRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLTWFRNE 262
++YL + + E +A QK +RN+AKRQ TWF+++
Sbjct: 244 IQYL---QNKISIDQAIE----IA--QKNTRNYAKRQYTWFKHQ 278
Score = 57 (25.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 261 NERIYHWLNAA--RPLENVLNYIITAYHDSTGTLVVPDYLQIXXXXXXXXEVSELKSYRT 318
NER + +N + +EN+L+ I A+ + VP+ +Q + E+ T
Sbjct: 205 NERFINMINTSVIEEIENLLSLNIPAHFPAMKAHGVPEIIQYLQNKISIDQAIEIAQKNT 264
Query: 319 RN 320
RN
Sbjct: 265 RN 266
>TIGR_CMR|CPS_0324 [details] [associations]
symbol:CPS_0324 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:167879 "Colwellia psychrerythraea 34H"
[GO:0006400 "tRNA modification" evidence=ISS] HAMAP:MF_00185
InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0008033
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 HOGENOM:HOG000039996 RefSeq:YP_267090.1
ProteinModelPortal:Q48A23 STRING:Q48A23 GeneID:3523106
KEGG:cps:CPS_0324 PATRIC:21464035 OMA:PIITNKH
BioCyc:CPSY167879:GI48-427-MONOMER Uniprot:Q48A23
Length = 316
Score = 126 (49.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YS F DA ++ GR+P++ GGT +Y + I G +P A+PEI + +E
Sbjct: 81 YSAADFCRDALVEIAEIRSNGRIPLLVGGTMMYFKSLIEGISPLPTANPEIRQAIEAEA- 139
Query: 70 DLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTGS 115
L + W A + + + A + ND R+ R+LE+ + T +
Sbjct: 140 -LSKG--WQAMHDQLAEIDPVSAERIHPNDPQRITRALEVYRLTSN 182
Score = 87 (35.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 39/122 (31%), Positives = 51/122 (41%)
Query: 169 RLDLYRSIDLRCEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIGYRQAMEYLLRCRQQ 228
R L+ I LR + M+ G E L L + R +GYRQ ++L
Sbjct: 209 RSTLHERIALRYQQMI--DLGFEQEVIKLKSRDDLHQDLPSIRCVGYRQMWQHL------ 260
Query: 229 GGTSSTGEFYAFLAEFQK--ASRNFAKRQLTWFRNERIYHWLNA--ARPLENVLNYIITA 284
GEF F+ A+R AKRQLTW RN HWL L VL+ ++ A
Sbjct: 261 -----EGEFDHDEMIFRGVCATRQLAKRQLTWLRNWPDLHWLTTDDKTNLAQVLS-LLEA 314
Query: 285 YH 286
H
Sbjct: 315 KH 316
>TIGR_CMR|APH_0431 [details] [associations]
symbol:APH_0431 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00185 InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0008033 eggNOG:COG0324
PANTHER:PTHR11088 KO:K00791 GO:GO:0052381 TIGRFAMs:TIGR00174
RefSeq:YP_505034.1 ProteinModelPortal:Q2GKR7 STRING:Q2GKR7
GeneID:3929983 KEGG:aph:APH_0431 PATRIC:20949478
HOGENOM:HOG000039996 OMA:RQLTYFR ProtClustDB:CLSK749553
BioCyc:APHA212042:GHPM-458-MONOMER Uniprot:Q2GKR7
Length = 312
Score = 127 (49.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YS G + +D + + +P++TGG+G+Y+ + G D+P PE+ + L
Sbjct: 69 YSAGLWLQDVKREVQQAWDDNVLPVITGGSGMYINSLVNGISDIPAIDPEVRKTARNLLE 128
Query: 70 DLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTGS 115
L G+ AA + A D A L N+ +++ R+ E+++ TG+
Sbjct: 129 SL---GN--AAFYEALVARDSNAARLHHNNTHQILRAFEVLEQTGT 169
Score = 82 (33.9 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 169 RLDLYRSIDLRCEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIGYRQAMEYLLRCRQQ 228
R LY I+ R M+ +D I SE +L+ L P +A G + ++YL Q
Sbjct: 196 RNKLYDKINRRFLTMMQ-TDAI-SEVKYLMSLNL-PMHAPVMKAHGAPEIVQYL-----Q 247
Query: 229 GGTSSTGEFYAFLAEFQKASRNFAKRQLTWFRNE 262
G EF + QK +R++AKRQ TWFR +
Sbjct: 248 GKI----EFMEAVEIAQKNTRHYAKRQCTWFRTQ 277
>TIGR_CMR|NSE_0570 [details] [associations]
symbol:NSE_0570 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00185 InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524 GO:GO:0008033
EMBL:CP000237 GenomeReviews:CP000237_GR eggNOG:COG0324
PANTHER:PTHR11088 KO:K00791 GO:GO:0052381 RefSeq:YP_506451.1
ProteinModelPortal:Q2GDJ5 STRING:Q2GDJ5 GeneID:3932110
KEGG:nse:NSE_0570 PATRIC:22681183 HOGENOM:HOG000113585 OMA:TICGFRE
ProtClustDB:CLSK2527722 BioCyc:NSEN222891:GHFU-587-MONOMER
Uniprot:Q2GDJ5
Length = 305
Score = 102 (41.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 11 SVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELAD 70
SV + D + V + +P++ GGT +YL ++G +P ++ E++ EL +
Sbjct: 72 SVASWMRDCADCLESVWAQKGIPLIVGGTPMYLYSLLHGINLLPSLPDCLMRELSEELDN 131
Query: 71 LQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTGSP-------PSAFQIP 123
L G FV K+G+ +R D Y++ R + TG S ++IP
Sbjct: 132 LGPSG---FLNRFVCKSGEDLSRFSC--DSYKMLRDVAYFLYTGKTIQELYRESSVYKIP 186
Query: 124 YDS 126
YDS
Sbjct: 187 YDS 189
Score = 97 (39.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 165 LSSHRLDLYRSIDLRCEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIGYRQAMEYLLR 224
+ S R LY I+ R + + + G + E A +++ + + T G+R+ YL
Sbjct: 196 IPSDRDSLYSKINERFLEAV--NSGAIDEVASVVENKAAFRNRAVTTICGFREIASYL-- 251
Query: 225 CRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLTWFRNERIYHWLNAARPLENVLNYII 282
R + T E +A Q++ RN+AKRQLTWFRN+ ++ + A ++ YI+
Sbjct: 252 -RDE----ITLE--RMVAMGQRSIRNYAKRQLTWFRNK--FNGIKAFDQPQDAERYIL 300
>TIGR_CMR|CBU_1082 [details] [associations]
symbol:CBU_1082 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:227377 "Coxiella burnetii RSA 493" [GO:0006400
"tRNA modification" evidence=ISS] HAMAP:MF_00185 InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008033 eggNOG:COG0324
PANTHER:PTHR11088 KO:K00791 GO:GO:0052381 TIGRFAMs:TIGR00174
HOGENOM:HOG000039996 ProtClustDB:PRK00091 OMA:PIITNKH
RefSeq:NP_820081.1 ProteinModelPortal:Q820W3 PRIDE:Q820W3
GeneID:1208983 KEGG:cbu:CBU_1082 PATRIC:17930895
BioCyc:CBUR227377:GJ7S-1074-MONOMER Uniprot:Q820W3
Length = 311
Score = 153 (58.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 38/113 (33%), Positives = 61/113 (53%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YS G+F++DA K + + R P++ GGT LY G D+P A + ++ E A
Sbjct: 74 YSAGQFYKDALSEIKTIEIRNRTPLLVGGTMLYFHILEQGFSDLPTADETVRKKIQEEAA 133
Query: 70 DLQRDGDWYAAVEFVVKAGDPK-ARSLAANDWYRLRRSLEIIKSTGSPPSAFQ 121
+ G W A + + A DPK A + ND R++R+ E+ ++TG P S++Q
Sbjct: 134 ---QHG-W-AKIHERLNAIDPKSAARINPNDAQRIQRAFEVYETTGQPLSSYQ 181
Score = 122 (48.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 53/190 (27%), Positives = 83/190 (43%)
Query: 96 AANDWYRLRRSLEIIKSTGSPPSAFQI-PYDSFREHSDSSETDHSYERNSSAGASDTNPK 154
A + W ++ L I P SA +I P D+ R + E + + S+ S K
Sbjct: 133 AQHGWAKIHERLNAI----DPKSAARINPNDAQRIQR-AFEVYETTGQPLSSYQSLKRFK 187
Query: 155 DLDYDFMCFFLS-SHRLDLYRSIDLRCEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAI 213
L Y F+ L+ +R L++ I+ R + ML + L E L + G L + A R +
Sbjct: 188 ALPYQFINLILAPENRSWLHQRIEKRFDQML--KNNFLEEVRQLYNRGDLNSDLPAIRTV 245
Query: 214 GYRQAMEYLLRCRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLTWFRNERIYHWLNAARP 273
GYRQ +YL S ++ + A+R AKRQLTW R W N+
Sbjct: 246 GYRQVWKYL---------SGEYDYETMRHKAIAATRQLAKRQLTWLRRWPDAKWFNSEDK 296
Query: 274 --LENVLNYI 281
+ V++Y+
Sbjct: 297 DLISQVVDYL 306
>TIGR_CMR|DET_0741 [details] [associations]
symbol:DET_0741 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006400 "tRNA modification" evidence=ISS] HAMAP:MF_00185
InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008033
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 HOGENOM:HOG000039995 OMA:TWFRRDP
RefSeq:YP_181476.1 ProteinModelPortal:Q3Z8H3 STRING:Q3Z8H3
GeneID:3229958 KEGG:det:DET0741 PATRIC:21608545
ProtClustDB:CLSK837327 BioCyc:DETH243164:GJNF-742-MONOMER
Uniprot:Q3Z8H3
Length = 325
Score = 104 (41.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 169 RLDLYRSIDLRCEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIGYRQAMEYLLRCRQQ 228
R +LYR++DLR ML G+ +E LL++G S + IGYRQ +Y+
Sbjct: 213 REELYRTVDLRVGKML--EQGLEAEVRHLLEQGYAATLPSMS-GIGYRQIAKYI------ 263
Query: 229 GGTSSTGEFYAFLAEFQKASRNFAKRQLTWFR-NERIYHWLNAARPLEN-VLNYI 281
GG S E + + Q + ++Q T+FR + HW+ +++ ++N +
Sbjct: 264 GGEISLSEA---IEQMQFETHRLIRQQNTYFRLADPDIHWITLEESMDSGIINLV 315
Score = 92 (37.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASP-EIIAEVNSEL 68
+S+ ++ A A + + R+PI+ GG+G YL+ + G +P+ +P E E
Sbjct: 87 FSLAEYQSLAYQAINKLHTQNRLPILVGGSGQYLKAVLEGW-SIPQIAPDETFRAAMFEK 145
Query: 69 ADLQRDGDWYAAVEFVVKAGDPKARS-LAANDWYRLRRSLEIIKSTGSPPSAFQ 121
A+ + +A + VK DP+A + + + R+ R+LE+I TG+ S Q
Sbjct: 146 AEKEGGASIFAEL---VKQ-DPQAAAKIDPRNIRRVVRALEVINKTGAEFSKLQ 195
>SGD|S000005800 [details] [associations]
symbol:MOD5 "Delta 2-isopentenyl pyrophosphate:tRNA
isopentenyl transferase" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0052381 "tRNA
dimethylallyltransferase activity" evidence=IEA;IDA] [GO:0006400
"tRNA modification" evidence=IDA;IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 PROSITE:PS50171 SGD:S000005800
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0005730
EMBL:BK006948 GO:GO:0046872 GO:GO:0006400 KO:K03261 EMBL:X89633
RefSeq:NP_014919.3 GeneID:854450 KEGG:sce:YOR276W eggNOG:COG0324
PANTHER:PTHR11088 KO:K00791 GO:GO:0052381 TIGRFAMs:TIGR00174
HOGENOM:HOG000039995 OMA:PIITNKH GeneTree:ENSGT00390000015214
OrthoDB:EOG42RHH4 EMBL:M15991 EMBL:Z75182 PIR:S67176
RefSeq:NP_014917.3 PDB:3EPH PDB:3EPJ PDB:3EPK PDB:3EPL PDBsum:3EPH
PDBsum:3EPJ PDBsum:3EPK PDBsum:3EPL ProteinModelPortal:P07884
SMR:P07884 DIP:DIP-4094N IntAct:P07884 MINT:MINT-536616
STRING:P07884 PaxDb:P07884 EnsemblFungi:YOR274W GeneID:854448
KEGG:sce:YOR274W CYGD:YOR274w EvolutionaryTrace:P07884
NextBio:976706 Genevestigator:P07884 GermOnline:YOR274W
Uniprot:P07884
Length = 428
Score = 121 (47.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 9 YYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSEL 68
YYS +F + +A +D+ ++G++PIV GGT YL+ + D K+S + ++
Sbjct: 83 YYS-HRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDT-KSSERKLTRKQLDI 140
Query: 69 ADLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTGSPPS 118
+ D D +VK A ND+ R++R LEI TG PS
Sbjct: 141 LE-STDPD--VIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPS 187
Score = 70 (29.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 156 LDYDFMCFFLSSHRLDLYRSIDLRCEDMLPGSDGILSEAAWLLD----EGLLPNS--NSA 209
L +D + +L S L++ +D R +DML G L E L + P N
Sbjct: 197 LKFDTLFLWLYSKPEPLFQRLDDRVDDML--ERGALQEIKQLYEYYSQNKFTPEQCENGV 254
Query: 210 TRAIGYRQAMEYLLRCRQQGGTS-STGEFYAFLAEFQKASRNFAKRQLTWFR 260
+ IG+++ + +L G T +T + + + +R +AKRQ+ W +
Sbjct: 255 WQVIGFKEFLPWLT-----GKTDDNTVKLEDCIERMKTRTRQYAKRQVKWIK 301
>UNIPROTKB|Q97RW5 [details] [associations]
symbol:miaA "tRNA dimethylallyltransferase" species:170187
"Streptococcus pneumoniae TIGR4" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00185 InterPro:IPR002627 InterPro:IPR018022
Pfam:PF01715 GO:GO:0005524 EMBL:AE005672 GenomeReviews:AE005672_GR
GO:GO:0008033 eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791
GO:GO:0052381 TIGRFAMs:TIGR00174 HOGENOM:HOG000039995
ProtClustDB:PRK00091 PIR:G95077 RefSeq:NP_345176.1
ProteinModelPortal:Q97RW5 EnsemblBacteria:EBSTRT00000025424
GeneID:930620 KEGG:spn:SP_0671 PATRIC:19705707 OMA:KEVRHAI
Uniprot:Q97RW5
Length = 294
Score = 141 (54.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 71/262 (27%), Positives = 105/262 (40%)
Query: 25 DVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELADLQRDGDWYAAVEFV 84
+V K+ +V+G + R G KASPE A V L D++ + Y+A +FV
Sbjct: 22 EVAKRFNGEVVSGDSQQVYRGLDIG---TAKASPEEQAAVPHHLIDVREITESYSAFDFV 78
Query: 85 VKA--------GDPKARSLAANDWYRLRRSLEIIKSTGSPPSAFQIPYDSFREHSDSSET 136
+A K +A ++ LE G P + Y + E E
Sbjct: 79 SEAKMTIEGIHNRGKLAIIAGGTGLYIQSLLEGYHLGGETPHEEILAYRASLEPYSDEEL 138
Query: 137 DH----------SYERNSSAGASDTNP--KDLD-----YDFMCFFLSSHRLDLYRSIDLR 179
H + R + A + +DL+ Y+ + L R LY I+ R
Sbjct: 139 AHLVDQAGLEIPQFNRRRAMRALEIAHFGQDLENQETLYEPLIICLDDERSQLYERINHR 198
Query: 180 CEDMLPGSDGILSEAAWLLDEGLLPNSNSATRAIGYRQAMEYLLRCRQQGGTSSTGEFYA 239
+ M G+L EA WL D PN +A + IGY++ Y R + E
Sbjct: 199 VDLMFEA--GLLDEAKWLFDHS--PNVQAA-KGIGYKELFPYF---RGEQTLEEASE--- 247
Query: 240 FLAEFQKASRNFAKRQLTWFRN 261
++A+R FAKRQLTWFRN
Sbjct: 248 ---SLKQATRRFAKRQLTWFRN 266
>UNIPROTKB|P16384 [details] [associations]
symbol:miaA "tRNA(i6A37) synthase" species:83333
"Escherichia coli K-12" [GO:0034605 "cellular response to heat"
evidence=IEP;IMP] [GO:0006400 "tRNA modification" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0052381 "tRNA dimethylallyltransferase
activity" evidence=IEA;IDA] HAMAP:MF_00185 InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524 GO:GO:0034605
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006400 EMBL:U14003 EMBL:Z11831
EMBL:U00005 EMBL:D00743 EMBL:M63655 eggNOG:COG0324
PANTHER:PTHR11088 KO:K00791 GO:GO:0052381 TIGRFAMs:TIGR00174
HOGENOM:HOG000039996 ProtClustDB:PRK00091 OMA:TWFRRDP PIR:B37318
RefSeq:NP_418592.1 RefSeq:YP_492313.1 PDB:2ZM5 PDB:2ZXU PDB:3FOZ
PDBsum:2ZM5 PDBsum:2ZXU PDBsum:3FOZ ProteinModelPortal:P16384
SMR:P16384 IntAct:P16384 PRIDE:P16384
EnsemblBacteria:EBESCT00000003699 EnsemblBacteria:EBESCT00000003700
EnsemblBacteria:EBESCT00000003701 EnsemblBacteria:EBESCT00000016810
GeneID:12934008 GeneID:948690 KEGG:ecj:Y75_p4057 KEGG:eco:b4171
PATRIC:32123915 EchoBASE:EB0590 EcoGene:EG10595
BioCyc:EcoCyc:EG10595-MONOMER BioCyc:ECOL316407:JW4129-MONOMER
BioCyc:MetaCyc:EG10595-MONOMER EvolutionaryTrace:P16384
Genevestigator:P16384 Uniprot:P16384
Length = 316
Score = 130 (50.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YS F DA D+ GR+P++ GGT LY + + G +P A PE+ A + + A
Sbjct: 79 YSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAA 138
Query: 70 DLQRDGDWYAAVEFVVKAGDPKARS-LAANDWYRLRRSLEIIKSTG 114
+ G W ++ ++ DP A + + ND RL R+LE+ +G
Sbjct: 139 E---QG-W-ESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISG 179
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 54/194 (27%), Positives = 82/194 (42%)
Query: 87 AGDPKARS-----LAANDWYRLRRSLEIIKSTGSPPSAFQI-PYDSFREHSDSSETDHSY 140
+ DP+ R+ A W L R L+ + P +A +I P D R S + E
Sbjct: 124 SADPEVRARIEQQAAEQGWESLHRQLQEV----DPVAAARIHPNDPQRL-SRALEV-FFI 177
Query: 141 ERNSSAGASDTNPKDLDYDFMCFFLS-SHRLDLYRSIDLRCEDMLPGSDGILSEAAWLLD 199
+ + T+ L Y F ++ + R L++ I+ R ML + G +E L
Sbjct: 178 SGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQML--ASGFEAEVRALFA 235
Query: 200 EGLLPNSNSATRAIGYRQAMEYLLRCRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLTWF 259
G L + R +GYRQ YL +G S Y + A+R AKRQ+TW
Sbjct: 236 RGDLHTDLPSIRCVGYRQMWSYL-----EGEISYDEMVYRGVC----ATRQLAKRQITWL 286
Query: 260 RNERIYHWLNAARP 273
R HWL++ +P
Sbjct: 287 RGWEGVHWLDSEKP 300
>UNIPROTKB|P65352 [details] [associations]
symbol:miaA "tRNA dimethylallyltransferase" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00185 InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715
GO:GO:0005524 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842580 GO:GO:0008033
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 HOGENOM:HOG000039995 ProtClustDB:PRK00091
OMA:TWFRRDP PIR:F70505 RefSeq:NP_217243.1 RefSeq:NP_337302.1
RefSeq:YP_006516171.1 ProteinModelPortal:P65352 SMR:P65352
EnsemblBacteria:EBMYCT00000003141 EnsemblBacteria:EBMYCT00000070743
GeneID:13319454 GeneID:887242 GeneID:925493 KEGG:mtc:MT2799
KEGG:mtu:Rv2727c KEGG:mtv:RVBD_2727c PATRIC:18127898
TubercuList:Rv2727c Uniprot:P65352
Length = 314
Score = 89 (36.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 189 GILSEAAWLLDEGLLPNSNSATRAIGYRQAMEYLLRCRQQGGTSSTGEFYAFLAEFQKAS 248
G++ E LL GL +A+RA+GY Q + L G + A + +
Sbjct: 217 GLVEEVRTLLRNGLREGV-TASRALGYAQVIAAL-----DAGAGAD-MMRAAREQTYLGT 269
Query: 249 RNFAKRQLTWFRNERIYHWLNA 270
R + +RQ +WFR + HWL+A
Sbjct: 270 RRYVRRQRSWFRRDHRVHWLDA 291
Score = 83 (34.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 11 SVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELAD 70
+V ++ A + + +G VP+V GG+ LY++ + P P + A LA+
Sbjct: 75 TVARYQRAAAADIEAIAARGAVPVVVGGSMLYVQSLL-DDWSFPATDPSVRARWERRLAE 133
Query: 71 LQRDGDWYAAVEFVVKAGDPKARS-LAANDWYRLRRSLEIIKSTGSPPSA 119
+ D + + DP A + + D R R+LE+++ TG P +A
Sbjct: 134 VGVD-----RLHAELARRDPAAAAAILPTDARRTVRALEVVELTGQPFAA 178
>UNIPROTKB|Q9KV12 [details] [associations]
symbol:miaA "tRNA dimethylallyltransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00185 InterPro:IPR002627
InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006400 eggNOG:COG0324
PANTHER:PTHR11088 KO:K00791 GO:GO:0052381 TIGRFAMs:TIGR00174
ProtClustDB:PRK00091 OMA:TWFRRDP PIR:B82334 RefSeq:NP_230000.1
ProteinModelPortal:Q9KV12 DNASU:2615059 GeneID:2615059
KEGG:vch:VC0346 PATRIC:20079765 Uniprot:Q9KV12
Length = 315
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YS F DA D++ +G++P++ GGT LY + + G +P A P I ++ E
Sbjct: 75 YSAADFRRDALKEMADIVAQGKIPLLVGGTMLYFKALLEGLSPLPAADPVIRQQIELEAE 134
Query: 70 DLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTG 114
L W A + + + A+ + ND RL R+LE+ + +G
Sbjct: 135 KL----GWQALHDQLQQIDPVSAQRIHPNDPQRLSRALEVYRISG 175
>TIGR_CMR|VC_0346 [details] [associations]
symbol:VC_0346 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006400 "tRNA modification" evidence=ISS] HAMAP:MF_00185
InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006400
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 ProtClustDB:PRK00091 OMA:TWFRRDP PIR:B82334
RefSeq:NP_230000.1 ProteinModelPortal:Q9KV12 DNASU:2615059
GeneID:2615059 KEGG:vch:VC0346 PATRIC:20079765 Uniprot:Q9KV12
Length = 315
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YS F DA D++ +G++P++ GGT LY + + G +P A P I ++ E
Sbjct: 75 YSAADFRRDALKEMADIVAQGKIPLLVGGTMLYFKALLEGLSPLPAADPVIRQQIELEAE 134
Query: 70 DLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKSTG 114
L W A + + + A+ + ND RL R+LE+ + +G
Sbjct: 135 KL----GWQALHDQLQQIDPVSAQRIHPNDPQRLSRALEVYRISG 175
>TIGR_CMR|BA_3843 [details] [associations]
symbol:BA_3843 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:198094 "Bacillus anthracis str. Ames"
[GO:0006400 "tRNA modification" evidence=ISS] HAMAP:MF_00185
InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008033
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 OMA:RQLTYFR RefSeq:NP_846094.1
RefSeq:YP_020479.2 RefSeq:YP_029813.1 ProteinModelPortal:Q81JG8
DNASU:1085280 EnsemblBacteria:EBBACT00000009524
EnsemblBacteria:EBBACT00000016419 EnsemblBacteria:EBBACT00000021769
GeneID:1085280 GeneID:2816420 GeneID:2848063 KEGG:ban:BA_3843
KEGG:bar:GBAA_3843 KEGG:bat:BAS3560 HOGENOM:HOG000039995
ProtClustDB:PRK00091 BioCyc:BANT260799:GJAJ-3619-MONOMER
BioCyc:BANT261594:GJ7F-3734-MONOMER Uniprot:Q81JG8
Length = 314
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/206 (27%), Positives = 85/206 (41%)
Query: 82 EFVVKAGDPKARSLAANDWYRLRRSLEIIKST---GSPPSAFQIPYDSFREHSDSSETDH 138
+F AGD R L R +E + P SA +I ++ R + E H
Sbjct: 114 QFTDDAGDAIYREQMEK--LALERGVEYVHKKLQEVDPESAERIHANNVRRVIRALEIFH 171
Query: 139 -SYERNSSAGASDTNPKDLDYDFMCFFLSSHRLDLYRSIDLRCEDMLPGSDGILSEAAWL 197
S E+ S N +L YD L+ R LY I+LR + M+ G+L E L
Sbjct: 172 TSGEKMSDQLEKQEN--ELLYDVSLIGLTMDREMLYDRINLRVDIMM--DQGLLEEVEGL 227
Query: 198 LDEGLLPNSNSATRAIGYRQAMEYLLRCRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLT 257
+ G+ + +AIGY++ +Y +++ + SR +AKRQLT
Sbjct: 228 YNRGI--RDCQSIQAIGYKEIYDYF---------EDRVSLEEAVSQLKTNSRRYAKRQLT 276
Query: 258 WFRNERIYHWLNAA--RPLENVLNYI 281
WFRN+ W + +L YI
Sbjct: 277 WFRNKMDVTWFDVTDGEKTSEILRYI 302
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 34/110 (30%), Positives = 61/110 (55%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
+SV +F E R +++ ++G++PI+ GGTGLY++ ++ A I E +LA
Sbjct: 73 FSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFDYQFTDDAGDAIYREQMEKLA 132
Query: 70 DLQRDGDWYAAVEFVVKAGDPK-ARSLAANDWYRLRRSLEIIKSTGSPPS 118
L+R ++ V ++ DP+ A + AN+ R+ R+LEI ++G S
Sbjct: 133 -LERGVEY---VHKKLQEVDPESAERIHANNVRRVIRALEIFHTSGEKMS 178
>POMBASE|SPAC343.15 [details] [associations]
symbol:tit1 "tRNA isopentenyltransferase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0052381 "tRNA dimethylallyltransferase activity" evidence=ISO]
InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715 PROSITE:PS50171
PomBase:SPAC343.15 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0046872 GO:GO:0006400
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 HOGENOM:HOG000039995 OMA:PIITNKH PIR:T38664
RefSeq:NP_593436.1 ProteinModelPortal:Q9UT75 STRING:Q9UT75
EnsemblFungi:SPAC343.15.1 GeneID:2543065 KEGG:spo:SPAC343.15
OrthoDB:EOG42RHH4 NextBio:20804093 Uniprot:Q9UT75
Length = 434
Score = 118 (46.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 1 MSAKHLNTYYSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPD---VPK-- 55
MS + + YSV +F DA ++ +G++PIV GGT YL+ ++ + K
Sbjct: 63 MSFLNFDKEYSVPEFERDASRVIDEIHSQGKIPIVVGGTHYYLQSLLFEDTTLSAIDKLT 122
Query: 56 --ASPEIIAEVNSELADLQRDGDWYAAVEFVVKAGDPKARSLAANDWYRLRRSLEIIKST 113
+SP +S + D D A + ++ K A D ++RRSLEI T
Sbjct: 123 NDSSPSKPPHPDSHILD----DDPSAMLSYLKKIDPVMAEQWHPRDTRKIRRSLEIYFHT 178
Query: 114 GSPPS 118
G PPS
Sbjct: 179 GRPPS 183
Score = 47 (21.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 25/109 (22%), Positives = 44/109 (40%)
Query: 156 LDYDFMCFFLSSHRLDLYRSIDLRCEDMLPGS--DGILSEAAWLLDEGLLPN-SNSATRA 212
L Y + F+ + L L +D R + ML D I S + E P+ + +
Sbjct: 198 LRYKSLIFWAFADSLVLMPRLDKRVDKMLSHGLVDEIKSMKSLAESEKFSPDFTRGIWQC 257
Query: 213 IGYRQAMEYLLRCRQQGGTSSTGEFYAFLAEFQKASRNFAKRQLTWFRN 261
IG+++ M + S F L + ++R +AK Q W ++
Sbjct: 258 IGFKEFMPWF-------EAPSDIVFNDCLERMKVSTRQYAKSQKKWIQS 299
>TIGR_CMR|SO_0602 [details] [associations]
symbol:SO_0602 "tRNA delta(2)-isopentenylpyrophosphate
transferase" species:211586 "Shewanella oneidensis MR-1"
[GO:0006400 "tRNA modification" evidence=ISS] HAMAP:MF_00185
InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715 GO:GO:0005524
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008033
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 HOGENOM:HOG000039996 ProtClustDB:PRK00091
RefSeq:NP_716235.1 ProteinModelPortal:Q8CX50 SMR:Q8CX50
GeneID:1168469 KEGG:son:SO_0602 PATRIC:23520894 OMA:DAISHER
Uniprot:Q8CX50
Length = 308
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
YS F DA + ++ G+ P++ GGT +Y + + G +P A I A++ +E
Sbjct: 76 YSAADFRADALSEIEQIISMGKTPLLVGGTMMYFKALLEGLSPLPSADEVIRADIQAEA- 134
Query: 70 DLQRDGDWYAAVEFVVKAGDP-KARSLAANDWYRLRRSLEIIKSTG 114
D + + A+ ++ DP A + ND RL R+LE+ + +G
Sbjct: 135 ----DANGWEALHDQLREIDPVSAERIHPNDPQRLSRALEVYRISG 176
>CGD|CAL0005287 [details] [associations]
symbol:orf19.4801 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] [GO:0052381 "tRNA
dimethylallyltransferase activity" evidence=IEA] HAMAP:MF_00185
InterPro:IPR002627 InterPro:IPR018022 Pfam:PF01715 CGD:CAL0005287
GO:GO:0005524 GO:GO:0008033 EMBL:AACQ01000001 EMBL:AACQ01000002
eggNOG:COG0324 PANTHER:PTHR11088 KO:K00791 GO:GO:0052381
TIGRFAMs:TIGR00174 RefSeq:XP_723297.1 RefSeq:XP_723487.1
ProteinModelPortal:Q5APG4 STRING:Q5APG4 GeneID:3634851
GeneID:3635002 KEGG:cal:CaO19.12264 KEGG:cal:CaO19.4801
Uniprot:Q5APG4
Length = 465
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 10 YSVGKFFEDARHATKDVLKKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIIAEVNSELA 69
Y + KF +DA+ D+ +G++PIV GGT YL+ ++ + ++ + E+ +E
Sbjct: 90 YHIHKFNQDAQSVIDDIHNRGKIPIVVGGTHYYLQTLLFNNKTIDDSNSNL-KELTAEQL 148
Query: 70 DLQRDGDWYAAVEF-VVKAGDPK-ARSLAANDWYRLRRSLEIIKSTGSPPSAFQIPYDSF 127
++ DG + F ++ DP A+ D +LRR+LEI + G S +I ++
Sbjct: 149 EIL-DGP--VDILFRTLQEVDPIIAKKFHPQDHRKLRRALEIYYTKGEKAS--EIYHEQK 203
Query: 128 REHSDSSETDHS 139
+ DSS ++
Sbjct: 204 LDELDSSSLKYN 215
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 352 344 0.00097 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 615 (65 KB)
Total size of DFA: 253 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.17u 0.08s 28.25t Elapsed: 00:00:03
Total cpu time: 28.18u 0.08s 28.26t Elapsed: 00:00:03
Start: Thu May 9 18:33:35 2013 End: Thu May 9 18:33:38 2013