Query 018649
Match_columns 352
No_of_seqs 277 out of 1876
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 03:56:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018649.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018649hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 1.8E-88 6.2E-93 648.5 35.4 320 26-351 44-363 (363)
2 1pci_A Procaricain; zymogen, h 100.0 2.1E-86 7.3E-91 628.7 33.5 317 32-351 6-322 (322)
3 3qj3_A Cathepsin L-like protei 100.0 1.9E-84 6.5E-89 617.1 33.2 304 39-350 13-331 (331)
4 3qt4_A Cathepsin-L-like midgut 100.0 4E-84 1.4E-88 613.6 30.4 305 37-350 16-329 (329)
5 2c0y_A Procathepsin S; proenzy 100.0 1.4E-83 4.7E-88 608.0 29.8 303 41-350 5-315 (315)
6 1by8_A Protein (procathepsin K 100.0 1.4E-83 4.9E-88 607.6 29.5 301 43-350 6-314 (314)
7 1cs8_A Human procathepsin L; p 100.0 1.4E-82 4.7E-87 601.4 29.6 298 43-350 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 1.1E-81 3.8E-86 593.7 29.3 296 46-351 3-307 (310)
9 1xkg_A DER P I, major mite fec 100.0 7E-78 2.4E-82 567.2 29.5 286 47-351 7-303 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 2.1E-71 7E-76 543.6 24.2 278 63-348 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 4.8E-70 1.6E-74 516.9 20.6 274 66-349 2-311 (325)
12 1ppo_A Protease omega; hydrola 100.0 9.2E-67 3.1E-71 468.9 24.2 216 134-351 1-216 (216)
13 1yal_A Chymopapain; hydrolase, 100.0 1.2E-66 4.1E-71 468.7 24.9 217 134-352 1-217 (218)
14 3p5u_A Actinidin; SAD, cystein 100.0 8.3E-67 2.8E-71 470.6 23.5 217 134-351 1-218 (220)
15 1cqd_A Protein (protease II); 100.0 1.9E-66 6.6E-71 468.3 25.7 217 133-351 2-218 (221)
16 1iwd_A Ervatamin B; cysteine p 100.0 3.3E-66 1.1E-70 464.8 24.8 215 134-351 1-215 (215)
17 1s4v_A Cysteine endopeptidase; 100.0 2.8E-66 9.7E-71 469.6 23.3 219 133-351 1-220 (229)
18 2fo5_A Cysteine proteinase EP- 100.0 2.9E-66 1E-70 477.1 22.1 220 132-351 2-225 (262)
19 2cio_A Papain; hydrolase/inhib 100.0 1.9E-65 6.6E-70 459.0 24.9 212 134-351 1-212 (212)
20 3pbh_A Procathepsin B; thiol p 100.0 5.7E-66 1.9E-70 488.0 21.9 262 75-349 11-313 (317)
21 2bdz_A Mexicain; cysteine prot 100.0 2.6E-65 8.9E-70 458.7 23.8 213 134-352 1-213 (214)
22 3ioq_A CMS1MS2; caricaceae, cy 100.0 2.5E-65 8.6E-70 458.7 23.3 212 134-351 1-212 (213)
23 3kwz_A Cathepsin K; enzyme inh 100.0 4.4E-65 1.5E-69 457.9 24.1 212 134-350 1-215 (215)
24 3u8e_A Papain-like cysteine pr 100.0 1.5E-65 5.2E-70 462.9 20.8 214 134-351 1-220 (222)
25 3ovx_A Cathepsin S; hydrolase, 100.0 7.2E-65 2.5E-69 457.5 22.3 213 134-350 2-218 (218)
26 2b1m_A SPE31; papain-like, sug 100.0 1.5E-64 5.2E-69 462.6 24.3 215 133-351 1-225 (246)
27 1o0e_A Ervatamin C; plant cyst 100.0 1.6E-64 5.5E-69 451.6 23.7 207 134-350 1-207 (208)
28 2xu3_A Cathepsin L1; hydrolase 100.0 3.7E-64 1.3E-68 453.3 23.6 212 134-350 1-220 (220)
29 2oul_A Falcipain 2; cysteine p 100.0 4.8E-64 1.6E-68 458.3 23.6 216 131-351 15-241 (241)
30 3f75_A Toxopain-2, cathepsin L 100.0 1.6E-64 5.6E-69 457.0 19.4 217 132-350 5-224 (224)
31 3bwk_A Cysteine protease falci 100.0 5E-64 1.7E-68 458.7 22.4 217 130-351 16-243 (243)
32 8pch_A Cathepsin H; hydrolase, 100.0 7.5E-64 2.6E-68 451.4 21.3 212 134-351 1-219 (220)
33 1m6d_A Cathepsin F, catsf; pap 100.0 1.3E-63 4.3E-68 447.9 22.7 209 134-351 1-214 (214)
34 3i06_A Cruzipain; autocatalyti 100.0 1.9E-63 6.6E-68 447.0 23.7 208 134-350 1-214 (215)
35 3f5v_A DER P 1 allergen; aller 100.0 1.3E-63 4.4E-68 450.4 20.8 210 132-350 8-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 5.2E-59 1.8E-63 431.1 20.7 210 132-349 5-256 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 1.2E-58 3.9E-63 426.1 21.3 210 133-349 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 1.2E-58 4E-63 430.6 20.9 215 130-350 32-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 3.8E-53 1.3E-57 391.8 22.1 209 136-349 9-260 (265)
40 3ois_A Cysteine protease; alph 100.0 2.3E-51 7.8E-56 384.5 14.0 234 88-332 13-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 8.8E-42 3E-46 332.2 16.6 209 133-352 47-425 (453)
42 2e01_A Cysteine proteinase 1; 100.0 8.2E-41 2.8E-45 325.7 17.6 209 133-352 52-426 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 7.2E-35 2.5E-39 278.1 18.0 184 145-331 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 3.2E-19 1.1E-23 140.3 9.7 76 38-113 15-90 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 8.7E-18 3E-22 126.3 6.8 65 46-112 8-76 (80)
46 1pxv_A Cysteine protease; hydr 97.4 0.0029 1E-07 53.0 13.2 129 150-331 25-162 (183)
47 1cv8_A Staphopain; cysteine pr 97.1 0.022 7.7E-07 47.5 14.6 119 150-317 16-144 (174)
48 1x9y_A Cysteine proteinase; ha 97.0 0.012 4.1E-07 54.4 13.8 128 150-330 201-337 (367)
49 3erv_A Putative C39-like pepti 92.4 0.46 1.6E-05 42.0 8.4 63 247-316 126-196 (236)
50 1dki_A Pyrogenic exotoxin B zy 64.6 15 0.0005 34.6 7.1 55 253-330 289-344 (371)
51 4d8b_A Streptopain; papain fol 60.8 15 0.00053 32.7 6.2 54 253-330 171-226 (261)
52 3bb7_A Interpain A; cysteine p 59.8 16 0.00055 33.5 6.4 59 254-330 239-298 (321)
53 1th5_A NIFU1; iron-sulfur clus 26.3 26 0.00088 24.8 1.4 27 146-174 37-63 (74)
54 2r9f_A Calpain-1 catalytic sub 21.7 86 0.0029 28.8 4.5 37 293-329 246-312 (339)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=1.8e-88 Score=648.51 Aligned_cols=320 Identities=52% Similarity=0.931 Sum_probs=275.8
Q ss_pred ccccccCCCCCCCCChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEcccCCCCCHHHHH
Q 018649 26 RDFSIVGYSPEDLTSNDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRKIKNYWLGLNEFADLRHEEFK 105 (352)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~~~s~~~g~N~FsDlt~~E~~ 105 (352)
++.+++++++++++++..+.++|++||.+|+|.|.+.+|+.+|++||++|+++|++||+++.+|++|+|+|+|||.+||+
T Consensus 44 ~~~s~~~y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~ 123 (363)
T 3tnx_A 44 MDFSIVGYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFK 123 (363)
T ss_dssp ----------CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHH
T ss_pred ccccccCCChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCccccccCCCCCcccccccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHH
Q 018649 106 EMFLGLKPDLARRKDQSHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQE 185 (352)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~ 185 (352)
+++++..+...................+||++||||++|.|+||||||.||||||||++++||++++++++..+.||+|+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~ 203 (363)
T 3tnx_A 124 EKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQE 203 (363)
T ss_dssp HHHSCSSCSCCCCSSSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHH
T ss_pred HHhcccccccccccccccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHH
Confidence 99987654322111111111222334579999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCe
Q 018649 186 LIDCDNTYNNGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPL 265 (352)
Q Consensus 186 l~dc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV 265 (352)
|+||+. .+.||+||.+..|++|+.++ |+++|++|||.+.++.|..........++.++..++..++..++.+|++|||
T Consensus 204 LvdC~~-~~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPv 281 (363)
T 3tnx_A 204 LLDCDR-RSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPV 281 (363)
T ss_dssp HHHHCT-TSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCE
T ss_pred HhcccC-CCCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCc
Confidence 999986 57899999999999999887 9999999999998887765443344566778888888899999999999999
Q ss_pred EEEEEecccccccccCceeeCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccc
Q 018649 266 SVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMA 345 (352)
Q Consensus 266 ~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~ 345 (352)
+|++++..++|++|++|||..+|++.++|||+|||||+ +|||||||||++|||+|||||+||++...|+|||++.|
T Consensus 282 svai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a 357 (363)
T 3tnx_A 282 SVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSS 357 (363)
T ss_dssp EEEECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCE
T ss_pred EEEEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCcccee
Confidence 99999877899999999999999888999999999987 59999999999999999999999987767899999999
Q ss_pred eeeeec
Q 018649 346 SYPIKK 351 (352)
Q Consensus 346 ~~p~~~ 351 (352)
+||+-+
T Consensus 358 ~yPikn 363 (363)
T 3tnx_A 358 FYPVKN 363 (363)
T ss_dssp EEEECC
T ss_pred eecccC
Confidence 999853
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=2.1e-86 Score=628.66 Aligned_cols=317 Identities=54% Similarity=1.024 Sum_probs=275.7
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEcccCCCCCHHHHHHHHhCC
Q 018649 32 GYSPEDLTSNDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRKIKNYWLGLNEFADLRHEEFKEMFLGL 111 (352)
Q Consensus 32 ~~~~~~~~~~~~~~~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~~~s~~~g~N~FsDlt~~E~~~~~~~~ 111 (352)
.+++++..++.++..+|++||.+|+|.|.+..|+.+|+.+|++|+++|++||+++.+|++|+|+|+|||.+||++++++.
T Consensus 6 ~~~~~~~~~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf~~~~~g~ 85 (322)
T 1pci_A 6 GYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGS 85 (322)
T ss_dssp ------CTHHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHHHHHHCCC
T ss_pred cCCcccccchHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHHHHHhcCC
Confidence 35666777888999999999999999999889999999999999999999999878999999999999999999988875
Q ss_pred CCccccccCCCCCcccccccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcC
Q 018649 112 KPDLARRKDQSHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDN 191 (352)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~ 191 (352)
.+....... ....+......+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.
T Consensus 86 ~~~~~~~~~-~~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~ 164 (322)
T 1pci_A 86 LIDATIEQS-YDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER 164 (322)
T ss_dssp BCCCSSCCC-CSEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT
T ss_pred CCccccccc-cccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC
Confidence 432211000 0011222233579999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCCCCCCCchHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEe
Q 018649 192 TYNNGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEA 271 (352)
Q Consensus 192 ~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~ 271 (352)
.+.||+||++..|++|+.++ |+++|++|||.+..+.|.........++|.+|..++..+++.|+++|++|||+|+|++
T Consensus 165 -~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~ 242 (322)
T 1pci_A 165 -RSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVES 242 (322)
T ss_dssp -TSCGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECT
T ss_pred -CCCCCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEec
Confidence 68899999999999999998 8999999999999999987643334578999999987789999999988999999999
Q ss_pred cccccccccCceeeCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 272 SGRDFQFYSGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 272 ~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
..++|++|++|||.++|++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+.+.|.|||++.++||+++
T Consensus 243 ~~~~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~~ 322 (322)
T 1pci_A 243 KGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 322 (322)
T ss_dssp TCHHHHTEEEEEECCSCCSCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECCC
T ss_pred ccccccccCCeEeCCCCCCCCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEeC
Confidence 75789999999999888888899999999999999999999999999999999999999975445899999999999874
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=1.9e-84 Score=617.09 Aligned_cols=304 Identities=38% Similarity=0.705 Sum_probs=268.6
Q ss_pred CChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCcEEEEcccCCCCCHHHHHHHHhCCCCc
Q 018649 39 TSNDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRK----IKNYWLGLNEFADLRHEEFKEMFLGLKPD 114 (352)
Q Consensus 39 ~~~~~~~~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~----~~s~~~g~N~FsDlt~~E~~~~~~~~~~~ 114 (352)
..+..+..+|++||++|+|.|.+..|+.+|++||++|+++|++||++ +.+|++|+|+|+|||.+||++++++..+.
T Consensus 13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~ 92 (331)
T 3qj3_A 13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMP 92 (331)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCC
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccc
Confidence 36788899999999999999998889999999999999999999985 68999999999999999999998875532
Q ss_pred cccccCCCCCccccc------ccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCC--CCCCCHHHH
Q 018649 115 LARRKDQSHEDFSYK------DVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGN--LASLSEQEL 186 (352)
Q Consensus 115 ~~~~~~~~~~~~~~~------~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~--~~~lS~q~l 186 (352)
...... ...+... ...+||++||||++|+||||||||.||||||||++++||++++++++. .+.||+|+|
T Consensus 93 ~~~~~~--~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~L 170 (331)
T 3qj3_A 93 ADLHKN--GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQL 170 (331)
T ss_dssp SSTTTT--CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHH
T ss_pred cccccc--CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHH
Confidence 111000 0111111 234799999999999999999999999999999999999999999998 899999999
Q ss_pred HhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc-CCe
Q 018649 187 IDCDNTYNNGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN-QPL 265 (352)
Q Consensus 187 ~dc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV 265 (352)
+||+.. +.||+||++..|++|+.+++||++|++|||.+.++.|..... ...++|.+|..++..++++||++|++ |||
T Consensus 171 vdC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~e~~lk~al~~~GPV 248 (331)
T 3qj3_A 171 VDCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPN-QVAARLSGYVYLSGPDENMLADMVATKGPV 248 (331)
T ss_dssp HHHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTT-SEEECCSEEEEESSCCHHHHHHHHHHHCCE
T ss_pred hhhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcc-cceeEeeEEEEeCCCCHHHHHHHHHhCCCE
Confidence 999964 889999999999999999889999999999999999987654 45678999999987899999999965 899
Q ss_pred EEEEEecccccccccCceeeCC-CC-CCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccc
Q 018649 266 SVAIEASGRDFQFYSGGVYDGH-CG-TQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINK 343 (352)
Q Consensus 266 ~v~~~~~~~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~ 343 (352)
+|+|++. .+|++|++|||..+ |. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++
T Consensus 249 ~v~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~ 324 (331)
T 3qj3_A 249 AVAFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNAN---NHCGIAG 324 (331)
T ss_dssp EEEECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTT
T ss_pred EEEEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCC---CccCcCC
Confidence 9999998 45999999999875 75 46899999999999999999999999999999999999999953 8999999
Q ss_pred cceeeee
Q 018649 344 MASYPIK 350 (352)
Q Consensus 344 ~~~~p~~ 350 (352)
.++||++
T Consensus 325 ~~~~p~v 331 (331)
T 3qj3_A 325 VASVPTL 331 (331)
T ss_dssp SCEEEEC
T ss_pred ceeeeeC
Confidence 9999985
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=4e-84 Score=613.57 Aligned_cols=305 Identities=42% Similarity=0.750 Sum_probs=263.4
Q ss_pred CCCChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCcEEEEcccCCCCCHHHHHHHHhCCC
Q 018649 37 DLTSNDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRK----IKNYWLGLNEFADLRHEEFKEMFLGLK 112 (352)
Q Consensus 37 ~~~~~~~~~~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~----~~s~~~g~N~FsDlt~~E~~~~~~~~~ 112 (352)
...++..+..+|++||++|+|.|.+..|+.+|++||++|+++|++||++ +.+|++|+|+|+|||.+||++ +++.+
T Consensus 16 ~~~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~ 94 (329)
T 3qt4_A 16 CSLPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRG 94 (329)
T ss_dssp ----CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHT
T ss_pred cccCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCc
Confidence 3446778889999999999999998889999999999999999999984 589999999999999999999 77644
Q ss_pred CccccccCC-CCCcccccccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcC
Q 018649 113 PDLARRKDQ-SHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDN 191 (352)
Q Consensus 113 ~~~~~~~~~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~ 191 (352)
+........ ....+.... .+||++||||++ +||||||||.||||||||++++||+++++++++.+.||+|+|+||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~-~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~ 172 (329)
T 3qt4_A 95 KAQKPKHPENLRMPYVSSK-KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSS 172 (329)
T ss_dssp CCC------CCEEECCCCC-SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCG
T ss_pred ccccccccccccccccCCc-cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcc
Confidence 311100000 001111122 479999999999 99999999999999999999999999999999999999999999985
Q ss_pred C-CCCCCCCCchHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc-CCeEEEE
Q 018649 192 T-YNNGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN-QPLSVAI 269 (352)
Q Consensus 192 ~-~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~ 269 (352)
. ++.||+||++..|++|++++ |+++|++|||.+.++.|..... ....+|.+|..++..++++||++|++ |||+|+|
T Consensus 173 ~~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i 250 (329)
T 3qt4_A 173 SYGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDSS-QSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAI 250 (329)
T ss_dssp GGTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCGG-GCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEE
T ss_pred ccCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCcc-cceEEeceEEEecCCCHHHHHHHHHhCCCEEEEE
Confidence 3 57899999999999999999 9999999999999999986543 34578999999987899999999965 8999999
Q ss_pred EecccccccccCceeeCC-CC-CCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCccccccccee
Q 018649 270 EASGRDFQFYSGGVYDGH-CG-TQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASY 347 (352)
Q Consensus 270 ~~~~~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~ 347 (352)
++. ++|++|++|||..+ |. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++.++|
T Consensus 251 ~a~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~y 326 (329)
T 3qt4_A 251 DAT-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAASY 326 (329)
T ss_dssp CCC-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTCEE
T ss_pred ecC-hhhhhccCceeecCCCCCCcCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCceeE
Confidence 998 59999999999874 75 47899999999999999999999999999999999999999953 89999999999
Q ss_pred eee
Q 018649 348 PIK 350 (352)
Q Consensus 348 p~~ 350 (352)
|++
T Consensus 327 p~v 329 (329)
T 3qt4_A 327 PAL 329 (329)
T ss_dssp EEC
T ss_pred eeC
Confidence 985
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.4e-83 Score=608.04 Aligned_cols=303 Identities=39% Similarity=0.724 Sum_probs=263.9
Q ss_pred hhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCcEEEEcccCCCCCHHHHHHHHhCCCCccc
Q 018649 41 NDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRK----IKNYWLGLNEFADLRHEEFKEMFLGLKPDLA 116 (352)
Q Consensus 41 ~~~~~~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~----~~s~~~g~N~FsDlt~~E~~~~~~~~~~~~~ 116 (352)
+.++..+|++||.+|+|.|.+..|+.+|+.+|++|+++|++||++ ..+|++|+|+|+|||.+||++++++..+...
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 345778999999999999988889999999999999999999975 3799999999999999999988887553221
Q ss_pred cccCCCCCcccccccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhc-CC-CC
Q 018649 117 RRKDQSHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCD-NT-YN 194 (352)
Q Consensus 117 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~-~~-~~ 194 (352)
.. .. ..+......+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+ .. .+
T Consensus 85 ~~-~~--~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~ 161 (315)
T 2c0y_A 85 WQ-RN--ITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGN 161 (315)
T ss_dssp GG-SC--BCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTC
T ss_pred cc-CC--ccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCC
Confidence 11 00 1111112246999999999999999999999999999999999999999999999999999999998 32 58
Q ss_pred CCCCCCchHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc-CCeEEEEEecc
Q 018649 195 NGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN-QPLSVAIEASG 273 (352)
Q Consensus 195 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~ 273 (352)
.||+||++..|++|+.+++|+++|++|||.+..+.|..... ....+|.+|..++..++++||++|++ |||+|+|++..
T Consensus 162 ~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~ 240 (315)
T 2c0y_A 162 KGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSK-YRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARH 240 (315)
T ss_dssp CGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGG-GEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCS
T ss_pred CCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCCc-ccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCc
Confidence 89999999999999987669999999999999999986543 34578999999987799999999965 89999999986
Q ss_pred cccccccCceeeCC-CCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 274 RDFQFYSGGVYDGH-CGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 274 ~~f~~y~~Gi~~~~-~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
++|++|++|||..+ |++.++|||+|||||+++|++|||||||||++|||+|||||+|+. .|+|||++.++||++
T Consensus 241 ~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 241 PSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNK---GNHCGIASFPSYPEI 315 (315)
T ss_dssp HHHHTEEEEEECCTTCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEEEEC
T ss_pred hhhhccCCCcccCCCCCCcCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCC---CCccCcCceeEEeeC
Confidence 68999999999886 887889999999999999999999999999999999999999984 278999999999985
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.4e-83 Score=607.64 Aligned_cols=301 Identities=43% Similarity=0.759 Sum_probs=263.5
Q ss_pred HHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCcEEEEcccCCCCCHHHHHHHHhCCCCccccc
Q 018649 43 KLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRK----IKNYWLGLNEFADLRHEEFKEMFLGLKPDLARR 118 (352)
Q Consensus 43 ~~~~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~----~~s~~~g~N~FsDlt~~E~~~~~~~~~~~~~~~ 118 (352)
++..+|++||++|+|.|.+..|+.+|+.+|++|+++|++||++ ..+|++|+|+|+|||.+||++++++..+.....
T Consensus 6 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 85 (314)
T 1by8_A 6 ILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHS 85 (314)
T ss_dssp THHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCCC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcccc
Confidence 4778999999999999998889999999999999999999975 378999999999999999998887755322110
Q ss_pred cCCCCCccccc-ccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCC
Q 018649 119 KDQSHEDFSYK-DVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGC 197 (352)
Q Consensus 119 ~~~~~~~~~~~-~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC 197 (352)
. ....+... ....||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. .+.||
T Consensus 86 ~--~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~~gC 162 (314)
T 1by8_A 86 R--SNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGC 162 (314)
T ss_dssp C--SSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TSCGG
T ss_pred c--CCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCCC
Confidence 0 00111111 12239999999999999999999999999999999999999999999999999999999986 68899
Q ss_pred CCCchHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc-CCeEEEEEeccccc
Q 018649 198 NGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN-QPLSVAIEASGRDF 276 (352)
Q Consensus 198 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f 276 (352)
+||++..|++|+.+++|+++|++|||.+..+.|..... ....+|.+|..++..++++||++|++ |||+|+|++..++|
T Consensus 163 ~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f 241 (314)
T 1by8_A 163 GGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSF 241 (314)
T ss_dssp GCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCGG-GCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHHH
T ss_pred cCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCCc-cceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHHh
Confidence 99999999999986669999999999999999986543 24567899999987799999999965 89999999986789
Q ss_pred ccccCceeeCC-CCC-CCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 277 QFYSGGVYDGH-CGT-QLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 277 ~~y~~Gi~~~~-~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
++|++|||..+ |+. .++|||+|||||+++|++|||||||||++|||+|||||+|+. .|+|||++.++||++
T Consensus 242 ~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 242 QFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNK---NNACGIANLASFPKM 314 (314)
T ss_dssp HTEEEECBCCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSS---SCGGGTTSSCEEECC
T ss_pred hhccCceecCCCCCCCCCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCC---CCcCCccCeeEEeeC
Confidence 99999999886 876 689999999999999999999999999999999999999984 278999999999985
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=1.4e-82 Score=601.44 Aligned_cols=298 Identities=42% Similarity=0.818 Sum_probs=261.0
Q ss_pred HHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCcEEEEcccCCCCCHHHHHHHHhCCCCccccc
Q 018649 43 KLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRK----IKNYWLGLNEFADLRHEEFKEMFLGLKPDLARR 118 (352)
Q Consensus 43 ~~~~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~----~~s~~~g~N~FsDlt~~E~~~~~~~~~~~~~~~ 118 (352)
.+..+|++||++|+|.| +.+|+.+|+++|++|+++|++||++ +.+|++|+|+|+|||.+||++++++..+....
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 46789999999999999 7889999999999999999999975 57999999999999999999888775432211
Q ss_pred cCCCCCcccccccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCC-CCCCC
Q 018649 119 KDQSHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNT-YNNGC 197 (352)
Q Consensus 119 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC 197 (352)
. ...+......+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+.. ++.||
T Consensus 85 -~--~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC 161 (316)
T 1cs8_A 85 -K--GKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGC 161 (316)
T ss_dssp -C--CEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGG
T ss_pred -c--CccccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCC
Confidence 0 0111112234799999999999999999999999999999999999999999999999999999999853 47899
Q ss_pred CCCchHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc-CCeEEEEEeccccc
Q 018649 198 NGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN-QPLSVAIEASGRDF 276 (352)
Q Consensus 198 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f 276 (352)
+||++..|++|+.+++|+++|++|||.+..+.|..... ...++|.+|..++. ++++||++|++ |||+|+|++..++|
T Consensus 162 ~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~~f 239 (316)
T 1cs8_A 162 NGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPK-YSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESF 239 (316)
T ss_dssp GCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGG-GEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSHHH
T ss_pred CCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCCc-cceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCChhh
Confidence 99999999999986569999999999999999986543 34678999999976 89999999965 89999999985689
Q ss_pred ccccCceeeCC-CCC-CCCeEEEEEEee---ec-CCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 277 QFYSGGVYDGH-CGT-QLDHGVAAVGYG---ST-RGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 277 ~~y~~Gi~~~~-~~~-~~~Hav~iVGyg---~~-~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
++|++|||..+ |+. .++|||+||||| ++ +|++|||||||||++|||+|||||+|+. .|+|||++.++||++
T Consensus 240 ~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 240 LFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR---RNHCGIASAASYPTV 316 (316)
T ss_dssp HTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEEECC
T ss_pred ccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCC---CCccCccceeeEeeC
Confidence 99999999876 875 689999999999 66 7899999999999999999999999985 278999999999985
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=1.1e-81 Score=593.74 Aligned_cols=296 Identities=41% Similarity=0.797 Sum_probs=256.9
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCcEEEEcccCCCCCHHHHHHHHhC-CCCccccccC
Q 018649 46 DLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRK----IKNYWLGLNEFADLRHEEFKEMFLG-LKPDLARRKD 120 (352)
Q Consensus 46 ~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~----~~s~~~g~N~FsDlt~~E~~~~~~~-~~~~~~~~~~ 120 (352)
.+|++||.+|+|.|.+..|+.+| .+|++|+++|++||++ +.+|++|+|+|+|||.+||++++++ ..........
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 47999999999999888898999 9999999999999975 5799999999999999999988877 4432111000
Q ss_pred CCCCcccccccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCC-CCCCCCC
Q 018649 121 QSHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNT-YNNGCNG 199 (352)
Q Consensus 121 ~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~G 199 (352)
...+..... +||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.. .+.||+|
T Consensus 82 --~~~~~~~~~-~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~G 158 (310)
T 2o6x_A 82 --GVPYEANNR-AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGG 158 (310)
T ss_dssp --SEECCC-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGC
T ss_pred --CCccccccC-CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCC
Confidence 011111122 699999999999999999999999999999999999999999999999999999999853 4889999
Q ss_pred CchHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc-CCeEEEEEeccccccc
Q 018649 200 GLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN-QPLSVAIEASGRDFQF 278 (352)
Q Consensus 200 G~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~ 278 (352)
|++..|++|+.. +|+++|++|||.+..+.|..... ...++|.+|..++..++++||++|++ |||+|+|++. ++|++
T Consensus 159 G~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~~ 235 (310)
T 2o6x_A 159 GLMENAYQYLKQ-FGLETESSYPYTAVEGQCRYNKQ-LGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFMM 235 (310)
T ss_dssp CCHHHHHHHHTT-SCBCBTTTSCCCSSCCCCCCCGG-GCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHHT
T ss_pred CCHHHHHHHHHH-CCcCchhcCCCCCCCCCccCCCC-CCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhhh
Confidence 999999999984 59999999999999899986542 34678999999987799999999964 8999999998 69999
Q ss_pred ccCceeeCC-CCC-CCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 279 YSGGVYDGH-CGT-QLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 279 y~~Gi~~~~-~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
|++|||..+ |+. .++|||+|||||+++|++|||||||||++|||+|||||+|+. .|+|||++.++||++.
T Consensus 236 Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~Cgi~~~~~~p~~~ 307 (310)
T 2o6x_A 236 YRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNR---GNMCGIASLASLPMVA 307 (310)
T ss_dssp EEEEEECCSSCCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSEEEEEEE
T ss_pred CCCceecCCCCCCCCCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCC---CCcCCccceeeEEEee
Confidence 999999864 774 789999999999999999999999999999999999999985 2789999999999863
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=7e-78 Score=567.24 Aligned_cols=286 Identities=30% Similarity=0.542 Sum_probs=247.7
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEcccCCCCCHHHHHHHHhCCCCccccccCCCCCcc
Q 018649 47 LFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRKIKNYWLGLNEFADLRHEEFKEMFLGLKPDLARRKDQSHEDF 126 (352)
Q Consensus 47 ~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~~~s~~~g~N~FsDlt~~E~~~~~~~~~~~~~~~~~~~~~~~ 126 (352)
+|++||++|+|.|.+..|+..|+.+|++|+++|++ |+ + |+|+|+|||.+||++++++........... ..+
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~---~---g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~--~~~ 77 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG---G---AINHLSDLSLDEFKNRFLMSAEAFEHLKTQ--FDL 77 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC---C---CCCTTTTSCHHHHHHHHSBCHHHHHHHHHH--HC-
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc---C---CCCcccCCCHHHHHHHhcCCCCccccccCC--ccc
Confidence 59999999999999889999999999999999999 75 2 999999999999999777633211100000 001
Q ss_pred cc-----cccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCc
Q 018649 127 SY-----KDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGL 201 (352)
Q Consensus 127 ~~-----~~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~ 201 (352)
.. ....+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||++ ..||+||+
T Consensus 78 ~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~GG~ 155 (312)
T 1xkg_A 78 NAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHGDT 155 (312)
T ss_dssp ----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCC
T ss_pred ccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCCCC
Confidence 10 012379999999999999999999999999999999999999999999999999999999982 28999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc--CCeEEEEEeccc-cccc
Q 018649 202 MDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN--QPLSVAIEASGR-DFQF 278 (352)
Q Consensus 202 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~--gPV~v~~~~~~~-~f~~ 278 (352)
+..|++|+.+. |+++|++|||.+..+.|. .. ....++|.+|..++..++++||++|++ |||+|+|++... +|++
T Consensus 156 ~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~-~~-~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~ 232 (312)
T 1xkg_A 156 IPRGIEYIQHN-GVVQESYYRYVAREQSCR-RP-NAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRH 232 (312)
T ss_dssp HHHHHHHHHHH-CEEBGGGSCCCSSCCCCC-CC-SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHT
T ss_pred HHHHHHHHHHc-CCCccccCCccCCCCCCC-CC-CCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccc
Confidence 99999999986 999999999999999998 43 234688999999987799999999964 899999999843 8999
Q ss_pred ccCceeeCC-CC-C-CCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 279 YSGGVYDGH-CG-T-QLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 279 y~~Gi~~~~-~~-~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
|++|||..+ |. . . +|||+|||||+++|++|||||||||++|||+|||||+|+ .|.|||++.++||++.
T Consensus 233 Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~----~n~CgI~~~~~~~~~~ 303 (312)
T 1xkg_A 233 YDGRTIIQRDNGYQPN-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAAN----IDLMMIEEYPYVVILG 303 (312)
T ss_dssp CCSSSCBCCCCSSCCE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECS----SCGGGTTTCCEEEECT
T ss_pred cCCcEEcCCCCCCCcC-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcC----CCcccccceeEEeecc
Confidence 999999874 76 4 6 999999999999999999999999999999999999998 3889999999999864
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=2.1e-71 Score=543.65 Aligned_cols=278 Identities=31% Similarity=0.544 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcEEEE-cccCCCCCHHHHHHHHhCCCCccccccCCCCCcccccccCCCCCceecC
Q 018649 63 DEKLERFEIFKDNLRHIDETNRKIKNYWLG-LNEFADLRHEEFKEMFLGLKPDLARRKDQSHEDFSYKDVVDLPKSVDWR 141 (352)
Q Consensus 63 ~E~~~R~~~F~~n~~~I~~~N~~~~s~~~g-~N~FsDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr 141 (352)
.|+..|++||++|+++|++||+++.+|++| +|+|+|||.+||++++.+.++...+...............+||++||||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR 214 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWDWR 214 (441)
T ss_dssp -----------------------------------------------------------------------CCCSCEETT
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCCEECC
Confidence 566899999999999999999988899998 8999999999999988765432111000000001112345799999999
Q ss_pred CCC---CCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCC--CCCHHHHHhhcCCCCCCCCCCchHHH-HHHHHHhCCC
Q 018649 142 KKG---AVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLA--SLSEQELIDCDNTYNNGCNGGLMDYA-FQYIVSTGGL 215 (352)
Q Consensus 142 ~~g---~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~--~lS~q~l~dc~~~~~~gC~GG~~~~a-~~~~~~~~Gi 215 (352)
+++ +|+||||||.||||||||++++||++++++++... .||||+|+||+. .+.||+||++..+ ++|++++ |+
T Consensus 215 ~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~-~~~GC~GG~~~~aa~~yi~~~-Gi 292 (441)
T 3pdf_A 215 NVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ-YAQGCEGGFPYLIAGKYAQDF-GL 292 (441)
T ss_dssp CBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHTTHHHHHT-CB
T ss_pred cCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc-CCCCCCCCchhHHHHHHHHhc-CC
Confidence 964 89999999999999999999999999999998764 599999999985 5889999999997 8999888 99
Q ss_pred CCCCCCCcccCCCcccCCCCCcceEEecceEecC----CCCHHHHHHHH-hcCCeEEEEEecccccccccCceeeCCCC-
Q 018649 216 HKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVP----QNSEDSLLKAL-ANQPLSVAIEASGRDFQFYSGGVYDGHCG- 289 (352)
Q Consensus 216 ~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~----~~~~~~i~~~l-~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~- 289 (352)
++|++|||.+..+.|..... .....+.+|..++ ..++++||++| .+|||+|+|++. ++|++|++|||..++.
T Consensus 293 ~tE~~yPY~~~~~~C~~~~~-~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~~~ 370 (441)
T 3pdf_A 293 VEEACFPYTGTDSPCKMKED-CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTGLR 370 (441)
T ss_dssp CBGGGSCCCSSCCCSCCCSS-CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC---
T ss_pred CcHHHeeecccCCCCCCccc-cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCCCC
Confidence 99999999999999986543 2345667777774 36789999998 468999999997 7999999999987532
Q ss_pred ------CCCCeEEEEEEeeec--CCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceee
Q 018649 290 ------TQLDHGVAAVGYGST--RGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYP 348 (352)
Q Consensus 290 ------~~~~Hav~iVGyg~~--~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p 348 (352)
..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++.+
T Consensus 371 ~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~----n~CGI~s~~~a~ 433 (441)
T 3pdf_A 371 DPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT----DECAIESIAVAA 433 (441)
T ss_dssp CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCCEEE
T ss_pred cccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCC----CccCCCCceEEe
Confidence 248999999999985 6899999999999999999999999995 789999987754
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=4.8e-70 Score=516.92 Aligned_cols=274 Identities=27% Similarity=0.462 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHHhcCC-CCcEEEEcc-cCCCCCHHHHHHHHhCCCCccccccCCCCCcccc-cccCCCCCceecCC
Q 018649 66 LERFEIFKDNLRHIDETNRK-IKNYWLGLN-EFADLRHEEFKEMFLGLKPDLARRKDQSHEDFSY-KDVVDLPKSVDWRK 142 (352)
Q Consensus 66 ~~R~~~F~~n~~~I~~~N~~-~~s~~~g~N-~FsDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lP~~~Dwr~ 142 (352)
+.|+..+..|.++|++||++ +.+|++|+| +|+|||.+||++++ +..+.+..........+.. ....+||++||||+
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~ 80 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASILPKRRFTEEEARAPLPSSFDSAE 80 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHh-CCCCCCcccccccCccccccccccCCCCcEehhH
Confidence 45778888899999999986 589999999 89999999998764 3322111000000011111 11357999999998
Q ss_pred C----CCCCccccCCCcchHHHHHHHHHHHHHHHHHhCC-CCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhCCCCC
Q 018649 143 K----GAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGN-LASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTGGLHK 217 (352)
Q Consensus 143 ~----g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~-~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~ 217 (352)
+ |.|+||||||.||||||||++++||++++++++. .+.||+|+|+||+...+.||+||++..|++|++++ |+++
T Consensus 81 ~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi~~ 159 (325)
T 3hhi_A 81 AWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GLVS 159 (325)
T ss_dssp HSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CBCB
T ss_pred hcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CCCc
Confidence 7 8999999999999999999999999999999987 89999999999986457899999999999999998 9999
Q ss_pred CCCCCcc-cC----------CCcccCC--------------C-CCcceEEecceEecCCCCHHHHHHHH-hcCCeEEEEE
Q 018649 218 EEDYPYI-ME----------EGTCEMT--------------K-GESEVVTINGYHDVPQNSEDSLLKAL-ANQPLSVAIE 270 (352)
Q Consensus 218 e~~yPY~-~~----------~~~C~~~--------------~-~~~~~~~i~~~~~v~~~~~~~i~~~l-~~gPV~v~~~ 270 (352)
|++|||. +. .+.|... . .......+..|. + .++++||++| .+|||+|+|+
T Consensus 160 e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i~ 236 (325)
T 3hhi_A 160 DYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAFD 236 (325)
T ss_dssp TTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEEE
T ss_pred ccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEEE
Confidence 9999998 32 2556510 0 001223456676 5 6899999999 5689999999
Q ss_pred ecccccccccCceeeCCCCC-CCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeee
Q 018649 271 ASGRDFQFYSGGVYDGHCGT-QLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPI 349 (352)
Q Consensus 271 ~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 349 (352)
+. ++|++|++|||..+++. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||++.++.++
T Consensus 237 ~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI~~~~~~g~ 311 (325)
T 3hhi_A 237 VY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGIEDGGSAGI 311 (325)
T ss_dssp EE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSCEEEEE
T ss_pred ec-cccccccCceecCCCCCCCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCC----CeecCccceEEee
Confidence 97 79999999999987765 469999999999999999999999999999999999999994 7899999988765
No 12
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=9.2e-67 Score=468.88 Aligned_cols=216 Identities=54% Similarity=1.073 Sum_probs=199.2
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKN- 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-
Confidence 7999999999999999999999999999999999999999999999999999999985 57899999999999999999
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCCC
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLD 293 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 293 (352)
|+++|++|||....+.|.........+++.+|..++..+++.||++|++|||+++|++..++|++|++|||+++|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (216)
T 1ppo_A 79 GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVD 158 (216)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCC
T ss_pred CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCC
Confidence 89999999999998899865432345788999989877899999999889999999996578999999999988888889
Q ss_pred eEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 294 HGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 294 Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
|||+|||||+++|++|||||||||++|||+|||||+|+.+.+.|+|||+++++||+++
T Consensus 159 HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~~ 216 (216)
T 1ppo_A 159 HAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 216 (216)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEECC
T ss_pred EEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEeeC
Confidence 9999999999999999999999999999999999999975555899999999999874
No 13
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=1.2e-66 Score=468.74 Aligned_cols=217 Identities=58% Similarity=1.092 Sum_probs=199.8
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYVANN- 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 7999999999999999999999999999999999999999999999999999999983 68899999999999999999
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCCC
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLD 293 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 293 (352)
|+++|++|||....+.|.........++|.+|..++..+++.||++|++|||+++|++..++|++|++|||+++|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (218)
T 1yal_A 79 GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLD 158 (218)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCC
Confidence 89999999999988899865432345789999999877899999999889999999997578999999999988888889
Q ss_pred eEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeecC
Q 018649 294 HGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKKK 352 (352)
Q Consensus 294 Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 352 (352)
|||+|||||+++|++|||||||||++|||+|||||+|+.+.+.|+|||++.++||++++
T Consensus 159 HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 217 (218)
T 1yal_A 159 HAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKGF 217 (218)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEECCC
T ss_pred EEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEEec
Confidence 99999999999999999999999999999999999999654458999999999999864
No 14
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=8.3e-67 Score=470.61 Aligned_cols=217 Identities=56% Similarity=1.071 Sum_probs=199.1
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCC-CCCCCCCCchHHHHHHHHHh
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNT-YNNGCNGGLMDYAFQYIVST 212 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a~~~~~~~ 212 (352)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+.. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999964 37899999999999999988
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCC
Q 018649 213 GGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQL 292 (352)
Q Consensus 213 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 292 (352)
+|+++|++|||...++.|.........+++.+|..++..+++.|+++|++|||++++++..++|++|++|||+++|....
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 89999999999999889975433233567889999988899999999988999999999767899999999998888889
Q ss_pred CeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 293 DHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 293 ~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
+|||+|||||+++|++|||||||||++|||+|||||+|+.+ +.++|||++.++||+++
T Consensus 161 ~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~-~~~~Cgi~~~~~~p~~~ 218 (220)
T 3p5u_A 161 DHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVG-GVGQCGIAKKASYPVKY 218 (220)
T ss_dssp CEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCC-TTCGGGTTSSCEEEECS
T ss_pred ceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCC-CCCccCcccccceEEEe
Confidence 99999999999999999999999999999999999999964 23599999999999865
No 15
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.9e-66 Score=468.35 Aligned_cols=217 Identities=59% Similarity=1.113 Sum_probs=200.0
Q ss_pred CCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHh
Q 018649 133 DLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVST 212 (352)
Q Consensus 133 ~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~ 212 (352)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTT-ANHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCC-CCCCCCCCCHHHHHHHHHHh
Confidence 68999999999999999999999999999999999999999999999999999999985 37899999999999999988
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCC
Q 018649 213 GGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQL 292 (352)
Q Consensus 213 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 292 (352)
+|+++|++|||....+.|..... ...++|.+|..++..++++||++|++|||+|+|++..++|++|++|||+.+|...+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~ 159 (221)
T 1cqd_A 81 GGINSEETYPYRGQDGICNSTVN-APVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISA 159 (221)
T ss_dssp TSBCBTTTSCCCSSCCCCCSSSC-CCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCcCCCCC-CceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcC
Confidence 79999999999999899986543 34578899998987789999999988999999999766899999999998888889
Q ss_pred CeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 293 DHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 293 ~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
+|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||++.
T Consensus 160 ~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 218 (221)
T 1cqd_A 160 NHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKK 218 (221)
T ss_dssp CEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC
T ss_pred CeEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEec
Confidence 99999999999999999999999999999999999999865445899999999999975
No 16
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=3.3e-66 Score=464.81 Aligned_cols=215 Identities=55% Similarity=1.063 Sum_probs=198.5
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+. .+.||+||++..|++|+++++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT-ASHGCNGGWMNNAFQYIITNG 79 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999985 478999999999999999877
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCCC
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLD 293 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 293 (352)
|+++|++|||....+.|..... ..+++.+|..++..++++||++|++|||+|++++..++|++|++|||+++|.+.++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~--~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~ 157 (215)
T 1iwd_A 80 GIDTQQNYPYSAVQGSCKPYRL--RVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQN 157 (215)
T ss_dssp CBCBTTTSCCCSSCCCCCTTCC--CCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CcccccccCccCCCCCCCCCCC--ceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCC
Confidence 9999999999998899986542 45788999988877899999999889999999998448999999999988888889
Q ss_pred eEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 294 HGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 294 Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
|||+|||||+++|++|||||||||++|||+|||||+|+.+...|+|||+++++||++.
T Consensus 158 HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 215 (215)
T 1iwd_A 158 HGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTKA 215 (215)
T ss_dssp EEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC
T ss_pred EEEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeeeC
Confidence 9999999999999999999999999999999999999965445899999999999863
No 17
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=2.8e-66 Score=469.57 Aligned_cols=219 Identities=66% Similarity=1.181 Sum_probs=199.9
Q ss_pred CCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHh
Q 018649 133 DLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVST 212 (352)
Q Consensus 133 ~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~ 212 (352)
+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+...+.||+||++..|++|++++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999985457899999999999999988
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCC
Q 018649 213 GGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQL 292 (352)
Q Consensus 213 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 292 (352)
+|+++|++|||....+.|.........++|.+|..++..+++.|+++|++|||+|+|.+..++|++|++|||+++|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 79999999999998889975422234567899999987789999999988999999999547899999999998888888
Q ss_pred CeEEEEEEeeecC-CccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 293 DHGVAAVGYGSTR-GLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 293 ~Hav~iVGyg~~~-g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
+|||+|||||+++ |++|||||||||++|||+|||||+|+.+.+.|+|||+++++||+++
T Consensus 161 ~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 220 (229)
T 1s4v_A 161 DHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKK 220 (229)
T ss_dssp CEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC
T ss_pred CeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEec
Confidence 9999999999986 8999999999999999999999999975556899999999999875
No 18
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2.9e-66 Score=477.06 Aligned_cols=220 Identities=64% Similarity=1.146 Sum_probs=201.0
Q ss_pred CCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHH
Q 018649 132 VDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVS 211 (352)
Q Consensus 132 ~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~ 211 (352)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+...+.||+||++..|++|+++
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999998546889999999999999998
Q ss_pred hCCCCCCCCCCcccCCCcccCCC--CCcc-eEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCC
Q 018649 212 TGGLHKEEDYPYIMEEGTCEMTK--GESE-VVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHC 288 (352)
Q Consensus 212 ~~Gi~~e~~yPY~~~~~~C~~~~--~~~~-~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~ 288 (352)
++|+++|++|||....+.|.... .... .++|.+|..++..+++.|+++|++|||+++|++..++|++|++|||+.+|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c 161 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGEC 161 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCC
Confidence 87999999999999988997543 1124 57899999998788999999998899999999975689999999999888
Q ss_pred CCCCCeEEEEEEeeec-CCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 289 GTQLDHGVAAVGYGST-RGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 289 ~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
++..+|||+|||||++ +|++|||||||||++|||+|||||+|+.+++.|+|||++.++||++.
T Consensus 162 ~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~ 225 (262)
T 2fo5_A 162 GTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKT 225 (262)
T ss_dssp CCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECC
T ss_pred CCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEec
Confidence 8888999999999998 58999999999999999999999999986656889999999999875
No 19
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.9e-65 Score=458.98 Aligned_cols=212 Identities=52% Similarity=0.987 Sum_probs=195.1
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLVAQY- 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHT-
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHHHHh-
Confidence 7999999999999999999999999999999999999999999999999999999985 57899999999999999998
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCCC
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLD 293 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 293 (352)
|+++|++|||....+.|.........+++.+|..++..+++.|+++|++|||+++|++..++|++|++|||+++|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~ 158 (212)
T 2cio_A 79 GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD 158 (212)
T ss_dssp CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCC
Confidence 89999999999988899865432345789999999877899999999889999999997458999999999988888889
Q ss_pred eEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 294 HGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 294 Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
|||+|||||+ +|||||||||++|||+|||||+|+.+...|+|||+++++||+++
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 212 (212)
T 2cio_A 159 HAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVKN 212 (212)
T ss_dssp EEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEECC
T ss_pred EEEEEEEecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEeC
Confidence 9999999998 79999999999999999999999975555899999999999874
No 20
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=5.7e-66 Score=488.03 Aligned_cols=262 Identities=27% Similarity=0.525 Sum_probs=210.1
Q ss_pred HHHHHHHhcCCCCcEEEEcccCCCCCHHHHHHHHhCCCCccccccCCCCCcccccccCCCCCceecCCC----CCCCccc
Q 018649 75 NLRHIDETNRKIKNYWLGLNEFADLRHEEFKEMFLGLKPDLARRKDQSHEDFSYKDVVDLPKSVDWRKK----GAVTHVK 150 (352)
Q Consensus 75 n~~~I~~~N~~~~s~~~g~N~FsDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~pVk 150 (352)
+.++|++||+++.+|++|+| |+|++.||++. +++..+..... ...+......+||++||||++ +.|+|||
T Consensus 11 ~~~~i~~~N~~~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~----~~~~~~~~~~~lP~s~DwR~~~~~c~~vtpVk 84 (317)
T 3pbh_A 11 SDELVNYVNKRNTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKP----PQRVMFTEDLKLPASFDAREQWPQCPTIKEIR 84 (317)
T ss_dssp CHHHHHHHHHHTCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCC----SEEECCCSCCCCCSSEEHHHHCTTCGGGTCCC
T ss_pred cHHHHHHHHCCCCCeEEeec-cccCCHHHHHH-HcCCCCCcccc----CcccccccccCCCCCEechhccCCCCCcCCcc
Confidence 45789999988889999999 99988877654 55544322110 011112223579999999987 6899999
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHhCC--CCCCCHHHHHhhcC-CCCCCCCCCchHHHHHHHHHhCCCCCCCCC------
Q 018649 151 NQGSCGSCWAFSTVAAVEGINQIVTGN--LASLSEQELIDCDN-TYNNGCNGGLMDYAFQYIVSTGGLHKEEDY------ 221 (352)
Q Consensus 151 dQg~cgsCwAfA~~~~lE~~~~~~~~~--~~~lS~q~l~dc~~-~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y------ 221 (352)
|||.||||||||++++||++++|+++. .+.||+|+|+||+. ..+.||+||++..|++|++++ |+++|++|
T Consensus 85 dQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~~c 163 (317)
T 3pbh_A 85 DQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHVGC 163 (317)
T ss_dssp BCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCCBS
T ss_pred ccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCCCC
Confidence 999999999999999999999999874 79999999999986 457899999999999999998 99999888
Q ss_pred -Cccc---------CCCcccCCCCC----------c------ceEEecceEecCCCCHHHHHHHHh-cCCeEEEEEeccc
Q 018649 222 -PYIM---------EEGTCEMTKGE----------S------EVVTINGYHDVPQNSEDSLLKALA-NQPLSVAIEASGR 274 (352)
Q Consensus 222 -PY~~---------~~~~C~~~~~~----------~------~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~ 274 (352)
||.. ..+.|...... . ..........+ ..++++||++|. +|||+|+|++. +
T Consensus 164 ~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v-~~~e~~i~~~i~~~GPV~v~i~~~-~ 241 (317)
T 3pbh_A 164 RPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSV-SNSEKDIMAEIYKNGPVEGAFSVY-S 241 (317)
T ss_dssp SCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEE-CSCHHHHHHHHHHHCCEEEEEEEE-G
T ss_pred cCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccC-CcHHHHHHHHHHHCCCEEEEEEec-c
Confidence 9984 23456421000 0 00111122345 357899999994 68999999997 7
Q ss_pred ccccccCceeeCCCCCC-CCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeee
Q 018649 275 DFQFYSGGVYDGHCGTQ-LDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPI 349 (352)
Q Consensus 275 ~f~~y~~Gi~~~~~~~~-~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 349 (352)
+|++|++|||.++|+.. ++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++.++
T Consensus 242 ~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~----n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 242 DFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQ----DHCGIESEVVAGI 313 (317)
T ss_dssp GGGGEEEEEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEECC
T ss_pred cccCCCCcEEccCCCCCCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCC----CcccCCCceEeee
Confidence 99999999999887764 59999999999999999999999999999999999999995 7899999887654
No 21
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=2.6e-65 Score=458.68 Aligned_cols=213 Identities=56% Similarity=1.105 Sum_probs=196.3
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~- 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER-RSHGCDGGYQTTSLQYVVDN- 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 7999999999999999999999999999999999999999999999999999999985 57899999999999999999
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCCC
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLD 293 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 293 (352)
|+++|++|||....+.|.........+++.+|..++..++++||++|++|||+|++++..++|++|++|||+.+|.+.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (214)
T 2bdz_A 79 GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTD 158 (214)
T ss_dssp CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCC
Confidence 99999999999988899866543456789999999878899999999889999999998668999999999988888899
Q ss_pred eEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeecC
Q 018649 294 HGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKKK 352 (352)
Q Consensus 294 Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 352 (352)
|||+|||||+ +|||||||||++|||+|||||+|+.+...|+|||++.++||++++
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 213 (214)
T 2bdz_A 159 HAVTAVGYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIKGY 213 (214)
T ss_dssp EEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEECC-
T ss_pred eEEEEEEcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEecC
Confidence 9999999998 799999999999999999999999654458999999999999864
No 22
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=2.5e-65 Score=458.67 Aligned_cols=212 Identities=54% Similarity=1.065 Sum_probs=196.0
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER-RSYGCRGGFPLYALQYVANS- 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 7999999999999999999999999999999999999999999999999999999996 68899999999999999999
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCCC
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLD 293 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 293 (352)
|+++|++|||.+..+.|.........+++.+|..++..+++.+++++++|||++++++..++|+.|++|||..+|...++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 158 (213)
T 3ioq_A 79 GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSID 158 (213)
T ss_dssp CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccC
Confidence 99999999999999999864433456789999999877888888888899999999997678999999999998888899
Q ss_pred eEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 294 HGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 294 Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
|||+|||||+ +|||||||||++|||+|||||+|+.+.+.|+|||++.++||+++
T Consensus 159 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 212 (213)
T 3ioq_A 159 HAVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTKN 212 (213)
T ss_dssp EEEEEEEEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEECC
T ss_pred ceEEEEecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEec
Confidence 9999999997 79999999999999999999999976556899999999999976
No 23
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=4.4e-65 Score=457.90 Aligned_cols=212 Identities=50% Similarity=0.918 Sum_probs=195.2
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||+. .+.||+||++..|++|+++++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNR 79 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999986 688999999999999999888
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHh-cCCeEEEEEecccccccccCceeeCC-CC-C
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALA-NQPLSVAIEASGRDFQFYSGGVYDGH-CG-T 290 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~-~~-~ 290 (352)
|+++|++|||....+.|..... ....++.+|..++..++++||++|+ +|||++++++..++|++|++|||..+ |. .
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 158 (215)
T 3kwz_A 80 GIDSEDAYPYVGQEESCMYNPT-GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD 158 (215)
T ss_dssp CEEBTTTSCCCSSCCCCCCCGG-GEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTT
T ss_pred CccccccCCCccCCCccccCCC-CceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCC
Confidence 9999999999999999986543 3457889999998778999999996 58999999997668999999999875 64 4
Q ss_pred CCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 291 QLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 291 ~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
.++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++.++||++
T Consensus 159 ~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 159 NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred hhhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 6899999999999999999999999999999999999999853 79999999999985
No 24
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.5e-65 Score=462.91 Aligned_cols=214 Identities=50% Similarity=1.001 Sum_probs=192.5
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+. .+.||+||++..|++|+++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~~ 79 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDT-XXXXXXGGDADDAFRWVITNG 79 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHHT
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccC-cccccCCCCHHHHHHHHHHcC
Confidence 7999999999999999999999999999999999999999999999999999999996 388999999999999999988
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccC-ceeeC-CCCC-
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSG-GVYDG-HCGT- 290 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~-Gi~~~-~~~~- 290 (352)
|+++|++|||...++.|...... .++|.+|..++ .++++|+++|++|||+|++++..++|++|++ |||+. +|..
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~ 156 (222)
T 3u8e_A 80 GIASDANYPYTGVDGTCDLNKPI--AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDD 156 (222)
T ss_dssp CBCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCC
T ss_pred CccchhcCCCcccCCccccCCCC--eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCC
Confidence 99999999999999999866542 67889999987 7899999999889999999998558999999 99998 6776
Q ss_pred --CCCeEEEEEEeeecC-CccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 291 --QLDHGVAAVGYGSTR-GLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 291 --~~~Hav~iVGyg~~~-g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
.++|||+|||||+++ |++|||||||||++|||+|||||+|+.+.+.++|||+++++||++.
T Consensus 157 ~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~~ 220 (222)
T 3u8e_A 157 PATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTKS 220 (222)
T ss_dssp GGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEECC
T ss_pred CCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEEe
Confidence 689999999999987 8999999999999999999999999975445699999999999864
No 25
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=7.2e-65 Score=457.45 Aligned_cols=213 Identities=48% Similarity=0.908 Sum_probs=195.2
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhc-CC-CCCCCCCCchHHHHHHHHH
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCD-NT-YNNGCNGGLMDYAFQYIVS 211 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~-~~-~~~gC~GG~~~~a~~~~~~ 211 (352)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ .. .+.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 5889999999999999987
Q ss_pred hCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc-CCeEEEEEecccccccccCceeeCC-CC
Q 018649 212 TGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN-QPLSVAIEASGRDFQFYSGGVYDGH-CG 289 (352)
Q Consensus 212 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Gi~~~~-~~ 289 (352)
++|+++|++|||....+.|..... ....++.+|..++..++++||++|++ |||++++++..++|++|++|||..+ |.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDSK-YRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGG-GEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCCCc-cceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 669999999999999999986543 34577899999987789999999965 8999999998568999999999875 76
Q ss_pred CCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 290 TQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 290 ~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
..++|||+|||||+++|++|||||||||++|||+|||||+|+. .|+|||+++++||++
T Consensus 161 ~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~---~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNK---GNHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCC---CCcccccCceeeeeC
Confidence 6789999999999999999999999999999999999999985 289999999999985
No 26
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.5e-64 Score=462.63 Aligned_cols=215 Identities=51% Similarity=0.955 Sum_probs=195.8
Q ss_pred CCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHh
Q 018649 133 DLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVST 212 (352)
Q Consensus 133 ~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~ 212 (352)
+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999985 57899999999999999987
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCcceEEecce---EecCCCCHHHHHHHHhc----CCeEEEEEecccccccccCceee
Q 018649 213 GGLHKEEDYPYIMEEGTCEMTKGESEVVTINGY---HDVPQNSEDSLLKALAN----QPLSVAIEASGRDFQFYSGGVYD 285 (352)
Q Consensus 213 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~---~~v~~~~~~~i~~~l~~----gPV~v~~~~~~~~f~~y~~Gi~~ 285 (352)
+|+++|++|||...++.|..... ...+++.+| ..++..++++||++|++ |||+++|++ ++|++|++|||+
T Consensus 80 ~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 80 GGIASEADYPYKARDGKCKANEI-QDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYD 156 (246)
T ss_dssp TCBCBTTTSCCCSSCCCCCGGGC-CCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEEC
T ss_pred CCcCccccccccCCCCcCcCCCC-CCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeec
Confidence 79999999999999889986533 345678888 88877789999999976 999999998 589999999998
Q ss_pred C-CCCCC--CCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 286 G-HCGTQ--LDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 286 ~-~~~~~--~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
. .|+.. ++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|+|||++.++||++.
T Consensus 157 ~~~c~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~~ 225 (246)
T 2b1m_A 157 GGNCSSPYGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIE 225 (246)
T ss_dssp CTTCCSSCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEECC
T ss_pred CCCCCCCCcCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEec
Confidence 8 57764 899999999999999999999999999999999999999964445899999999999874
No 27
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=1.6e-64 Score=451.64 Aligned_cols=207 Identities=60% Similarity=1.103 Sum_probs=191.5
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|+++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYIINNG 79 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999985 578999999999999999887
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCCCCC
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLD 293 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 293 (352)
|+++|++|||...++.|.. . ...+++.+|..++..+++.||++|++|||+|+|++..++|++|++|||+++|++.++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~-~--~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~ 156 (208)
T 1o0e_A 80 GIDTQANYPYKAVQGPCQA-A--SKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLN 156 (208)
T ss_dssp CBCBTTTSCCCSSCCCCCC-C--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCccCCCCcCCC-C--CceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCC
Confidence 9999999999999899986 2 245678899988877899999999889999999997458999999999988888889
Q ss_pred eEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 294 HGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 294 Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
|||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||+++++||++
T Consensus 157 HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 157 HGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp EEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred EEEEEEEeCC----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 9999999998 79999999999999999999999852 378999999999986
No 28
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=3.7e-64 Score=453.32 Aligned_cols=212 Identities=51% Similarity=0.966 Sum_probs=192.0
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCC-CCCCCCCCchHHHHHHHHHh
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNT-YNNGCNGGLMDYAFQYIVST 212 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a~~~~~~~ 212 (352)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999853 47899999999999999754
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHh-cCCeEEEEEecccccccccCceeeCC-CCC
Q 018649 213 GGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALA-NQPLSVAIEASGRDFQFYSGGVYDGH-CGT 290 (352)
Q Consensus 213 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~-~~~ 290 (352)
.|+++|++|||....+.|..... ...+++++|..++. ++++||++|+ +|||+|+|++..++|++|++|||..+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNPK-YSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCGG-GEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred CCcccccccCCcccCcCccCCCC-CcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 59999999999999889986542 34678999999876 8999999996 48999999997568999999999876 775
Q ss_pred -CCCeEEEEEEee----ecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 291 -QLDHGVAAVGYG----STRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 291 -~~~Hav~iVGyg----~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
.++|||+||||| +++|++|||||||||++|||+|||||+|+.+ |+|||+++++||++
T Consensus 159 ~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 220 (220)
T ss_dssp SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeeeC
Confidence 689999999999 5678899999999999999999999999852 78999999999985
No 29
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=4.8e-64 Score=458.34 Aligned_cols=216 Identities=40% Similarity=0.811 Sum_probs=195.5
Q ss_pred cCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHH
Q 018649 131 VVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIV 210 (352)
Q Consensus 131 ~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~ 210 (352)
..+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. .+.||+||++..|++|+.
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~-~~~gC~GG~~~~a~~yi~ 93 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF-KNYGCNGGLINNAFEDMI 93 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT-TSCTTBCBCHHHHHHHHH
T ss_pred cccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHH
Confidence 3579999999999999999999999999999999999999999999999999999999985 478999999999999999
Q ss_pred HhCCCCCCCCCCcccCCCc-ccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCC
Q 018649 211 STGGLHKEEDYPYIMEEGT-CEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCG 289 (352)
Q Consensus 211 ~~~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~ 289 (352)
++.|+++|++|||....+. |..... ...++|.+|..++..++++||++| |||+|+|.+. ++|++|++|||++.|+
T Consensus 94 ~~~Gi~~e~~yPY~~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~ 169 (241)
T 2oul_A 94 ELGGICPDGDYPYVSDAPNLCNIDRC-TEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECG 169 (241)
T ss_dssp HTTSBCBTTSSCCCTTSCCCCCTTSS-SCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBC
T ss_pred HhCCcCccccCCCcCCCCCcCCCCCC-ccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCC
Confidence 8569999999999998888 986543 345789999989877899999999 9999999997 7999999999988777
Q ss_pred CCCCeEEEEEEeeecC----------CccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 290 TQLDHGVAAVGYGSTR----------GLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 290 ~~~~Hav~iVGyg~~~----------g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
..++|||+|||||+++ |++|||||||||++|||+|||||+|+.+...+.|||++.++||++.
T Consensus 170 ~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~~ 241 (241)
T 2oul_A 170 DQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLIE 241 (241)
T ss_dssp SSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEECC
T ss_pred CCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEeeC
Confidence 6689999999999885 7899999999999999999999999964323449999999999863
No 30
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.6e-64 Score=456.97 Aligned_cols=217 Identities=50% Similarity=0.958 Sum_probs=197.9
Q ss_pred CCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCC-CCCCCCCCchHHHHHHHH
Q 018649 132 VDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNT-YNNGCNGGLMDYAFQYIV 210 (352)
Q Consensus 132 ~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a~~~~~ 210 (352)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+.. .+.||+||++..|++|++
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999853 388999999999999999
Q ss_pred HhCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCCCC
Q 018649 211 STGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGT 290 (352)
Q Consensus 211 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~ 290 (352)
+++|+++|++|||....+.|..... ....++.+|..++..+++.|+++|++|||++++++..++|++|++|||++.|..
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~ 163 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQSC-EKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGT 163 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGGS-CCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCC
T ss_pred HhCCccccccCCCcCCCCCCCcCCC-CceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCC
Confidence 8559999999999999889986543 234678899999878899999999989999999998558999999999977877
Q ss_pred CCCeEEEEEEeeec--CCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 291 QLDHGVAAVGYGST--RGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 291 ~~~Hav~iVGyg~~--~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ ..|.|||+++++||++
T Consensus 164 ~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 164 DLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKG-EEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSC-TTCGGGTTSSCEEEEC
T ss_pred ccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCC-CCCcCcccCceeeeeC
Confidence 89999999999998 78999999999999999999999999953 2489999999999985
No 31
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=5e-64 Score=458.73 Aligned_cols=217 Identities=42% Similarity=0.808 Sum_probs=195.4
Q ss_pred ccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHH
Q 018649 130 DVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYI 209 (352)
Q Consensus 130 ~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~ 209 (352)
...+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. .+.||+||++..|++|+
T Consensus 16 ~~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~-~~~gC~GG~~~~a~~y~ 94 (243)
T 3bwk_A 16 DAKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSV-KNNGCYGGYITNAFDDM 94 (243)
T ss_dssp TCCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT-TSCGGGCCCHHHHHHHH
T ss_pred ccccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHH
Confidence 34579999999999999999999999999999999999999999999999999999999985 37899999999999999
Q ss_pred HHhCCCCCCCCCCcccCCCc-ccCCCCCcceEEecceEecCCCCHHHHHHHHhcCCeEEEEEecccccccccCceeeCCC
Q 018649 210 VSTGGLHKEEDYPYIMEEGT-CEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHC 288 (352)
Q Consensus 210 ~~~~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~ 288 (352)
+++.|+++|++|||....+. |..... ...++|.+|..++..++++||++| |||+|+|.+. ++|+.|++|||+..|
T Consensus 95 ~~~~Gi~~e~~yPY~~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c 170 (243)
T 3bwk_A 95 IDLGGLCSQDDYPYVSNLPETCNLKRC-NERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGEC 170 (243)
T ss_dssp HHTTSBCBTTTSCCCTTSCCCCCGGGC-SSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCC
T ss_pred HHhCCcccccccCCcCCCCCcCCCCCC-ccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCC
Confidence 98569999999999998888 986543 345788999989877899999999 9999999997 789999999998878
Q ss_pred CCCCCeEEEEEEeeecC----------CccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 289 GTQLDHGVAAVGYGSTR----------GLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 289 ~~~~~Hav~iVGyg~~~----------g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
+..++|||+|||||+++ |++|||||||||++|||+|||||+|+.+...+.|||++.++||++.
T Consensus 171 ~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~~ 243 (243)
T 3bwk_A 171 GAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLLE 243 (243)
T ss_dssp CSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC-
T ss_pred CCcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEecC
Confidence 76689999999999885 7899999999999999999999999964323449999999999863
No 32
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=7.5e-64 Score=451.40 Aligned_cols=212 Identities=44% Similarity=0.910 Sum_probs=194.1
Q ss_pred CCCceecCCCC-CCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCC-CCCCCCCCchHHHHHHHHH
Q 018649 134 LPKSVDWRKKG-AVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNT-YNNGCNGGLMDYAFQYIVS 211 (352)
Q Consensus 134 lP~~~Dwr~~g-~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~~~~a~~~~~~ 211 (352)
||++||||++| +|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. .+.||+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999998 899999999999999999999999999999999999999999999853 5789999999999999998
Q ss_pred hCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHh-cCCeEEEEEecccccccccCceeeCC-CC
Q 018649 212 TGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALA-NQPLSVAIEASGRDFQFYSGGVYDGH-CG 289 (352)
Q Consensus 212 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~-~~ 289 (352)
++|+++|++|||....+.|...+. ....++.+|..++..++++||++|. +|||++++++. ++|++|++|||..+ |.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQPD-KAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGG-GEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCCCC-cceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 889999999999999899986543 3457788999998889999999995 58999999998 69999999999874 54
Q ss_pred C---CCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 290 T---QLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 290 ~---~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||++++.||+..
T Consensus 159 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYPIPL 219 (220)
T ss_dssp CSTTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEEC
T ss_pred CCCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeEeec
Confidence 3 589999999999999999999999999999999999999984 789999999999853
No 33
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.3e-63 Score=447.93 Aligned_cols=209 Identities=45% Similarity=0.812 Sum_probs=189.1
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhC
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||.. .+.||+||++..|++|+++++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~i~~~~ 79 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK-MDKACMGGLPSNAYSAIKNLG 79 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999985 478999999999999999877
Q ss_pred CCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHh-cCCeEEEEEecccccccccCceeeCC---CC
Q 018649 214 GLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALA-NQPLSVAIEASGRDFQFYSGGVYDGH---CG 289 (352)
Q Consensus 214 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~---~~ 289 (352)
|+++|++|||.+....|..... ...+++.++..++. ++++||++|. +|||+|++++. .|++|++|||+.+ |.
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~ 155 (214)
T 1m6d_A 80 GLETEDDYSYQGHMQSCQFSAE-KAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCS 155 (214)
T ss_dssp CBCBTTTSCCCSSCCCCCCCGG-GCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSC
T ss_pred CcccccCcCcCCCCCcCCCCcc-cceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCC
Confidence 9999999999998889986543 23467888888854 8899999995 68999999987 5999999999863 65
Q ss_pred C-CCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeec
Q 018649 290 T-QLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK 351 (352)
Q Consensus 290 ~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 351 (352)
. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.+.||++.
T Consensus 156 ~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~~ 214 (214)
T 1m6d_A 156 PWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVVD 214 (214)
T ss_dssp TTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEECC
T ss_pred CCcCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEeC
Confidence 4 589999999999999999999999999999999999999984 789999999999863
No 34
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.9e-63 Score=447.04 Aligned_cols=208 Identities=44% Similarity=0.833 Sum_probs=186.4
Q ss_pred CCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHh-
Q 018649 134 LPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVST- 212 (352)
Q Consensus 134 lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~- 212 (352)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK-TDSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS-SSCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC-CCCCCCCCCHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999985 57899999999999999985
Q ss_pred -CCCCCCCCCCcccCCC---cccCCCCCcceEEecceEecCCCCHHHHHHHHh-cCCeEEEEEecccccccccCceeeCC
Q 018649 213 -GGLHKEEDYPYIMEEG---TCEMTKGESEVVTINGYHDVPQNSEDSLLKALA-NQPLSVAIEASGRDFQFYSGGVYDGH 287 (352)
Q Consensus 213 -~Gi~~e~~yPY~~~~~---~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~ 287 (352)
+|+++|++|||....+ .|..... ....++.+|..++. ++++||++|+ +|||++++++ ++|++|++|||+..
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~~-~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~--~~f~~Y~~Giy~~~ 155 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSGH-TVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA--SSWMTYTGGVMTSC 155 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSSC-CEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC--TTGGGCCSSEECSC
T ss_pred cccccccCccCCcCCCCCCCccccCCc-ccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc--hHHhcCCCCcccCC
Confidence 5799999999987543 6876543 34578899998854 8899999995 6899999998 48999999999864
Q ss_pred CCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 288 CGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 288 ~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
....++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||++++.||++
T Consensus 156 ~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 156 VSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVV 214 (215)
T ss_dssp CCSCCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEEE
T ss_pred CCCccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEec
Confidence 445689999999999999999999999999999999999999984 78999999999986
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.3e-63 Score=450.43 Aligned_cols=210 Identities=32% Similarity=0.573 Sum_probs=192.0
Q ss_pred CCCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHH
Q 018649 132 VDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVS 211 (352)
Q Consensus 132 ~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~ 211 (352)
.+||++||||++|+|+||||||.||||||||++++||+++.+++++.++||||+|+||.. +.||+||++..|++|+++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~ 85 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQH 85 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999999999999999999986 889999999999999999
Q ss_pred hCCCCCCCCCCcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc--CCeEEEEEec-ccccccccCceeeC-C
Q 018649 212 TGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN--QPLSVAIEAS-GRDFQFYSGGVYDG-H 287 (352)
Q Consensus 212 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~--gPV~v~~~~~-~~~f~~y~~Gi~~~-~ 287 (352)
+ |+++|++|||.+..+.|. .. ....+++.+|..++..++++||++|++ |||+|++.+. .++|++|++|||.. .
T Consensus 86 ~-Gi~~e~~yPY~~~~~~C~-~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~ 162 (222)
T 3f5v_A 86 N-GVVQESYYRYVAREQSCR-RP-NAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRD 162 (222)
T ss_dssp H-CEEBGGGSCCCSSCCCCC-CC-SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCC
T ss_pred c-CCCchhhCCCcccCCCcc-CC-cCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCC
Confidence 8 999999999999989998 32 245678999999988899999999965 7999999984 26899999998754 3
Q ss_pred C-CCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeee
Q 018649 288 C-GTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIK 350 (352)
Q Consensus 288 ~-~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 350 (352)
+ ...++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 163 ~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 163 NGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp CSSSCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred CCCCccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 3 34689999999999999999999999999999999999999994 89999999999985
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=5.2e-59 Score=431.12 Aligned_cols=210 Identities=30% Similarity=0.588 Sum_probs=177.6
Q ss_pred CCCCCceecCCC----CCCCccccCCCcchHHHHHHHHHHHHHHHHHhC--CCCCCCHHHHHhhcCC-CCCCCCCCchHH
Q 018649 132 VDLPKSVDWRKK----GAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTG--NLASLSEQELIDCDNT-YNNGCNGGLMDY 204 (352)
Q Consensus 132 ~~lP~~~Dwr~~----g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~--~~~~lS~q~l~dc~~~-~~~gC~GG~~~~ 204 (352)
.+||++||||+. +.|+||||||.||||||||++++||++++++++ ..+.||+|+|+||+.. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 479999998876 789999999999999999999999999999875 3699999999999853 468999999999
Q ss_pred HHHHHHHhCCCCC-------CCCCCcc---------cCCCcccCCC--------C---------CcceEEecceEecCCC
Q 018649 205 AFQYIVSTGGLHK-------EEDYPYI---------MEEGTCEMTK--------G---------ESEVVTINGYHDVPQN 251 (352)
Q Consensus 205 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~C~~~~--------~---------~~~~~~i~~~~~v~~~ 251 (352)
|++|++++ |+++ |++|||. +..+.|.... . ....+.+. +..++ .
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~-~~~v~-~ 161 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYN-SYSVS-N 161 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSC-CEECC-S
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeee-eEEeC-C
Confidence 99999987 9999 9999998 3345564210 0 00011222 33454 5
Q ss_pred CHHHHHHHHh-cCCeEEEEEecccccccccCceeeCCCCCC-CCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEE
Q 018649 252 SEDSLLKALA-NQPLSVAIEASGRDFQFYSGGVYDGHCGTQ-LDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMK 329 (352)
Q Consensus 252 ~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~-~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~ 329 (352)
++++||++|. +|||+|+|++. ++|+.|++|||.++|+.. ++|||+|||||+++|++|||||||||++|||+|||||+
T Consensus 162 ~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 162 SEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred CHHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEEEE
Confidence 8999999995 58999999997 799999999999876653 69999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccccccceeee
Q 018649 330 RNTGKPEGLCGINKMASYPI 349 (352)
Q Consensus 330 ~~~~~~~~~Cgi~~~~~~p~ 349 (352)
|+. |.|||++.+++++
T Consensus 241 rg~----n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 241 RGQ----DHCGIESEVVAGI 256 (266)
T ss_dssp CSS----CGGGTTTSCEECC
T ss_pred cCC----CcccccCceEEEE
Confidence 984 7899999998876
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.2e-58 Score=426.13 Aligned_cols=210 Identities=29% Similarity=0.586 Sum_probs=176.1
Q ss_pred CCCCceecCCC----CCCCccccCCCcchHHHHHHHHHHHHHHHHHhC--CCCCCCHHHHHhhcCCCCCCCCCCchHHHH
Q 018649 133 DLPKSVDWRKK----GAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTG--NLASLSEQELIDCDNTYNNGCNGGLMDYAF 206 (352)
Q Consensus 133 ~lP~~~Dwr~~----g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~--~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~ 206 (352)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..+.||+|+|+||+...+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999987 689999999999999999999999999999976 679999999999986567899999999999
Q ss_pred HHHHHhCCCCCCCCC-------Ccc---------cCCCcccCCC----------C---Ccc----eEEecceEecCCCCH
Q 018649 207 QYIVSTGGLHKEEDY-------PYI---------MEEGTCEMTK----------G---ESE----VVTINGYHDVPQNSE 253 (352)
Q Consensus 207 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~C~~~~----------~---~~~----~~~i~~~~~v~~~~~ 253 (352)
+|++++ |+++|+.| ||. +..+.|.... . ... .........+ ..++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~-~~~~ 159 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNV-KNDE 159 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEEC-CSCH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEec-CCcH
Confidence 999998 99999888 996 3344553211 0 000 0001112244 3489
Q ss_pred HHHHHHHh-cCCeEEEEEecccccccccCceeeCCCCC-CCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEcc
Q 018649 254 DSLLKALA-NQPLSVAIEASGRDFQFYSGGVYDGHCGT-QLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRN 331 (352)
Q Consensus 254 ~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~ 331 (352)
++||++|. +|||+|++++. ++|++|++|||..++.. .++|||+|||||+++|++|||||||||++|||+|||||+|+
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~rg 238 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRIVRG 238 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECS
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEEEcC
Confidence 99999995 68999999997 79999999999987655 46999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccceeee
Q 018649 332 TGKPEGLCGINKMASYPI 349 (352)
Q Consensus 332 ~~~~~~~Cgi~~~~~~p~ 349 (352)
. |+|||++.++..+
T Consensus 239 ~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 239 R----DECSIESEVTAGR 252 (254)
T ss_dssp S----CGGGTTSSEEEEE
T ss_pred C----CeecCCCceEeec
Confidence 4 7899999887654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.2e-58 Score=430.56 Aligned_cols=215 Identities=30% Similarity=0.579 Sum_probs=183.9
Q ss_pred ccCCCCCceecCCC---CCCCccccCC---CcchHHHHHHHHHHHHHHHHHhC-C--CCCCCHHHHHhhcCCCCCCCCCC
Q 018649 130 DVVDLPKSVDWRKK---GAVTHVKNQG---SCGSCWAFSTVAAVEGINQIVTG-N--LASLSEQELIDCDNTYNNGCNGG 200 (352)
Q Consensus 130 ~~~~lP~~~Dwr~~---g~v~pVkdQg---~cgsCwAfA~~~~lE~~~~~~~~-~--~~~lS~q~l~dc~~~~~~gC~GG 200 (352)
...+||++||||+. ++|+|||||| .||||||||++++||++++++++ . .+.||+|+|+||+. ..||+||
T Consensus 32 ~~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG 109 (277)
T 1deu_A 32 SPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGG 109 (277)
T ss_dssp CGGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEE
T ss_pred ccccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCC
Confidence 45679999999998 6899999999 99999999999999999999875 3 47999999999985 4899999
Q ss_pred chHHHHHHHHHhCCCCCCCCCCcccCCCcccC-CC-------------CCcceEEecceEecCCCCHHHHHHHH-hcCCe
Q 018649 201 LMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEM-TK-------------GESEVVTINGYHDVPQNSEDSLLKAL-ANQPL 265 (352)
Q Consensus 201 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~-~~-------------~~~~~~~i~~~~~v~~~~~~~i~~~l-~~gPV 265 (352)
++..|++|++++ |+++|++|||...+..|.. .. .....+++..|..++ ++++||++| .+|||
T Consensus 110 ~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV 186 (277)
T 1deu_A 110 NDLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPI 186 (277)
T ss_dssp CHHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCE
T ss_pred CHHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCE
Confidence 999999999987 9999999999998888862 10 011235677777773 588999998 56899
Q ss_pred EEEEEecccccccccCceeeCCC-CCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEccCC----CCCCccc
Q 018649 266 SVAIEASGRDFQFYSGGVYDGHC-GTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTG----KPEGLCG 340 (352)
Q Consensus 266 ~v~~~~~~~~f~~y~~Gi~~~~~-~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~----~~~~~Cg 340 (352)
+|+|++. ++|++|++|||..++ ...++|||+|||||+++|++|||||||||++|||+|||||+|+.+ .....||
T Consensus 187 ~v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cg 265 (277)
T 1deu_A 187 SCGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLA 265 (277)
T ss_dssp EEEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTT
T ss_pred EEEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccce
Confidence 9999998 789999999998864 446899999999999999999999999999999999999999952 0001799
Q ss_pred ccccceeeee
Q 018649 341 INKMASYPIK 350 (352)
Q Consensus 341 i~~~~~~p~~ 350 (352)
|++.+.|++-
T Consensus 266 Ie~~~~~~~p 275 (277)
T 1deu_A 266 IEEHCTFGDP 275 (277)
T ss_dssp TTSCEEEEEE
T ss_pred eccccEeecc
Confidence 9999998864
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=3.8e-53 Score=391.84 Aligned_cols=209 Identities=25% Similarity=0.494 Sum_probs=165.2
Q ss_pred CceecCCC-CCCC--ccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcCC-CCCCCCCCc-hHHHHHHHH
Q 018649 136 KSVDWRKK-GAVT--HVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNT-YNNGCNGGL-MDYAFQYIV 210 (352)
Q Consensus 136 ~~~Dwr~~-g~v~--pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~-~~~gC~GG~-~~~a~~~~~ 210 (352)
...|||+. |+++ ||||||.||||||||++++||++++++++..+.||+|+|+||+.. .+.||+||. +..++.|++
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 45799999 6877 999999999999999999999999999889999999999999854 478999996 445568888
Q ss_pred HhCCCCCCCCCCcccC--CCcccCCCC----------------CcceEEecceEecCC----CC----HHHHHHHHh-cC
Q 018649 211 STGGLHKEEDYPYIME--EGTCEMTKG----------------ESEVVTINGYHDVPQ----NS----EDSLLKALA-NQ 263 (352)
Q Consensus 211 ~~~Gi~~e~~yPY~~~--~~~C~~~~~----------------~~~~~~i~~~~~v~~----~~----~~~i~~~l~-~g 263 (352)
+++|+++|++|||... .+.|..... .+...++.+|..++. .+ +++||++|+ +|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 8856999999999864 467875321 112245677776643 23 478999995 58
Q ss_pred CeEEEEEeccccccccc-Ccee-eCCCCC-CCCeEEEEEEeeec---CC--ccEEEEEcCCCCCCCCCceEEEEccCCCC
Q 018649 264 PLSVAIEASGRDFQFYS-GGVY-DGHCGT-QLDHGVAAVGYGST---RG--LDYIIVKNSWGPKWGEKGYIRMKRNTGKP 335 (352)
Q Consensus 264 PV~v~~~~~~~~f~~y~-~Gi~-~~~~~~-~~~Hav~iVGyg~~---~g--~~ywivkNSWG~~WGe~Gy~~i~~~~~~~ 335 (352)
||+|+|.+. +|+.|+ +|++ ...|+. .++|||+|||||++ +| ++|||||||||++|||+|||||+|+.
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g--- 243 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYG--- 243 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSC---
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecC---
Confidence 999999985 577664 4433 335765 68999999999985 55 68999999999999999999999852
Q ss_pred CCcccccc---cceeee
Q 018649 336 EGLCGINK---MASYPI 349 (352)
Q Consensus 336 ~~~Cgi~~---~~~~p~ 349 (352)
.|.|||+. .+.||+
T Consensus 244 ~n~Cgi~~~~~~~~~~~ 260 (265)
T 2wbf_X 244 PTHCHFNFIHSVVIFNV 260 (265)
T ss_dssp CTTCSSCSCCEEEEECE
T ss_pred CCccCcceeEEEEeccc
Confidence 37899554 555654
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=2.3e-51 Score=384.50 Aligned_cols=234 Identities=22% Similarity=0.271 Sum_probs=173.7
Q ss_pred cEEEEcccCCCCCHHHHHHHHhCCCCccccccCCCCCcccccccCCCCCceecCCCCCCCccccCCCcchHHHHHHHHHH
Q 018649 88 NYWLGLNEFADLRHEEFKEMFLGLKPDLARRKDQSHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAV 167 (352)
Q Consensus 88 s~~~g~N~FsDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~l 167 (352)
...-.+|++.++..|.++..+ +..+++...++....+ ......+||++||||+++ ||||||.||||||||++++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~l-G~~p~~~d~rd~~~~~-~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~al 87 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSGY-GYIPDIADIRDFSYTP-EKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAAI 87 (291)
T ss_dssp ----------CCCCCCCCTTC-CEECCCCCTTCCBCCC-CHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHHH
T ss_pred CcccchhhHhHhhhccccccC-CCCCCCCcccccccCC-CccccccCCcceecccCC---CcccCCCCccHHHHHHHHHH
Confidence 344567788888877766543 4444332222211110 001124799999999984 99999999999999999999
Q ss_pred HHHHHHHhCCCCCCCHHHHH--hhcCC--CC-CCCCCCchHHHHHHHHHhCCCCCCCCCCcccCC---CcccCCC-----
Q 018649 168 EGINQIVTGNLASLSEQELI--DCDNT--YN-NGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEE---GTCEMTK----- 234 (352)
Q Consensus 168 E~~~~~~~~~~~~lS~q~l~--dc~~~--~~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~C~~~~----- 234 (352)
|+++. +++..+.||+|+|+ +|... .+ .+|.||++..|++|++++ ||++|++|||.+.+ +.|...+
T Consensus 88 E~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~ 165 (291)
T 3ois_A 88 QFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPAS 165 (291)
T ss_dssp HHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGGG
T ss_pred HHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCcccccccccccccccc
Confidence 99876 56777899999998 67631 23 468899999999999998 99999999999873 3564410
Q ss_pred -C-------CcceEEecceEecCCCCHHHHHHHHhc-CCeEEEEEecccccccccC--ceeeCC-CCC--CCCeEEEEEE
Q 018649 235 -G-------ESEVVTINGYHDVPQNSEDSLLKALAN-QPLSVAIEASGRDFQFYSG--GVYDGH-CGT--QLDHGVAAVG 300 (352)
Q Consensus 235 -~-------~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~--Gi~~~~-~~~--~~~Hav~iVG 300 (352)
. ....+++.+|..++. ++++|+++|++ |||++++.+. ++|+.|++ |||..+ |.. .++|||+|||
T Consensus 166 ~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iVG 243 (291)
T 3ois_A 166 KKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLCVG 243 (291)
T ss_dssp SCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEEEE
T ss_pred CCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEEEE
Confidence 0 113467889998865 89999999965 6999999998 79999998 999876 333 2599999999
Q ss_pred eeecCCccEEEEEcCCCCCCCCCceEEEEccC
Q 018649 301 YGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNT 332 (352)
Q Consensus 301 yg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~ 332 (352)
||+ +++|||||||||++|||+|||||+|+.
T Consensus 244 y~~--~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 244 YDD--EIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EET--TTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EeC--CCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 984 568999999999999999999999983
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=8.8e-42 Score=332.21 Aligned_cols=209 Identities=16% Similarity=0.229 Sum_probs=160.8
Q ss_pred CCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHH-hCCCCCCCH----------------HHHHhhcCC---
Q 018649 133 DLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIV-TGNLASLSE----------------QELIDCDNT--- 192 (352)
Q Consensus 133 ~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~-~~~~~~lS~----------------q~l~dc~~~--- 192 (352)
..|..|+++....++||+|||+||+|||||+++++|+.+.++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 457788888888899999999999999999999999999998 578899999 999999742
Q ss_pred ----------CCCCCCCCchHHHHHHHHHhCCCCCCCCCCcccCC---------------------------C------c
Q 018649 193 ----------YNNGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEE---------------------------G------T 229 (352)
Q Consensus 193 ----------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 229 (352)
.+.||+||....++.++.+. |++++++|||.... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 36899999999999999876 99999999997631 1 1
Q ss_pred ----------------c----------cCCCCC----------c-----c--eE--EecceEe-----------------
Q 018649 230 ----------------C----------EMTKGE----------S-----E--VV--TINGYHD----------------- 247 (352)
Q Consensus 230 ----------------C----------~~~~~~----------~-----~--~~--~i~~~~~----------------- 247 (352)
| ...... + . .. .+.+|..
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 110000 0 0 00 2233332
Q ss_pred ----------------cCCCCH-HHHHHHHhc-CCeEEEEEecccccccccCceeeCCCC--------------------
Q 018649 248 ----------------VPQNSE-DSLLKALAN-QPLSVAIEASGRDFQFYSGGVYDGHCG-------------------- 289 (352)
Q Consensus 248 ----------------v~~~~~-~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Gi~~~~~~-------------------- 289 (352)
++.... +.++.+|++ +||.+++++.. +.++++|||+.+|.
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 221111 344567766 59999999983 44569999987642
Q ss_pred ---CCCCeEEEEEEee--ec-CCc-cEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeecC
Q 018649 290 ---TQLDHGVAAVGYG--ST-RGL-DYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKKK 352 (352)
Q Consensus 290 ---~~~~Hav~iVGyg--~~-~g~-~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 352 (352)
+..+|||+||||| .+ +|+ +|||||||||++||++||++|+++ .+..+++.+++.|
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~--------wf~ey~~~vvV~k 425 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE--------WFSEYVYEVVVDR 425 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH--------HHHHHEEEEEEEG
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh--------hHhhceEEEEech
Confidence 3579999999999 65 787 999999999999999999999986 6777777777653
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=8.2e-41 Score=325.73 Aligned_cols=209 Identities=17% Similarity=0.206 Sum_probs=148.1
Q ss_pred CCCCceecCCCCCCCccccCCCcchHHHHHHHHHHHHHHHHH-hCCCCCCCH----------------HHHHhhcCC---
Q 018649 133 DLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIV-TGNLASLSE----------------QELIDCDNT--- 192 (352)
Q Consensus 133 ~lP~~~Dwr~~g~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~-~~~~~~lS~----------------q~l~dc~~~--- 192 (352)
..|..|+|+..+.+|||||||+||+|||||+++++|+.+.++ +++.+.||+ |+|+||+..
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 457788888888899999999999999999999999999998 788899999 778999742
Q ss_pred --------CCCCCCCCchHHHHHHHHHhCCCCCCCCCCc-ccC---------------------------------C---
Q 018649 193 --------YNNGCNGGLMDYAFQYIVSTGGLHKEEDYPY-IME---------------------------------E--- 227 (352)
Q Consensus 193 --------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~--- 227 (352)
.+.||+||.+..++.++.+. |+++|++||| ... .
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 37899999999999999887 9999999999 310 0
Q ss_pred ------------------CcccCCC--C-----------------Cc---------------------------ceEEec
Q 018649 228 ------------------GTCEMTK--G-----------------ES---------------------------EVVTIN 243 (352)
Q Consensus 228 ------------------~~C~~~~--~-----------------~~---------------------------~~~~i~ 243 (352)
+.|+..+ . .+ ..+.+.
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 0111100 0 00 000000
Q ss_pred -----------ceEecCCCC-HHHHHHHHhc-CCeEEEEEecccccccccCceeeCCC---------------------C
Q 018649 244 -----------GYHDVPQNS-EDSLLKALAN-QPLSVAIEASGRDFQFYSGGVYDGHC---------------------G 289 (352)
Q Consensus 244 -----------~~~~v~~~~-~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Gi~~~~~---------------------~ 289 (352)
.|.+++... .+.++.+|+. +||.+++++. .+.+|++|||+..| .
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~ 368 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHE 368 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTS
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCC
Confidence 122332211 1345566766 5999999997 47788999998765 2
Q ss_pred CCCCeEEEEEEeeec-CCc--cEEEEEcCCCCCCCCCceEEEEccCCCCCCcccccccceeeeecC
Q 018649 290 TQLDHGVAAVGYGST-RGL--DYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKKK 352 (352)
Q Consensus 290 ~~~~Hav~iVGyg~~-~g~--~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 352 (352)
+..+|||+|||||.+ +|+ +|||||||||++||++||++|+++ .+..+++.+++.|
T Consensus 369 s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~ivV~k 426 (457)
T 2e01_A 369 SLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIVVDI 426 (457)
T ss_dssp CCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEEEEG
T ss_pred CCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEEech
Confidence 357999999999986 788 899999999999999999999996 6777777777654
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=7.2e-35 Score=278.13 Aligned_cols=184 Identities=23% Similarity=0.291 Sum_probs=134.1
Q ss_pred CCCccccCCCcchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhhcC-----------CCCCCCCCCchHHHHHHHHHhC
Q 018649 145 AVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDN-----------TYNNGCNGGLMDYAFQYIVSTG 213 (352)
Q Consensus 145 ~v~pVkdQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~-----------~~~~gC~GG~~~~a~~~~~~~~ 213 (352)
.++||||||+||+|||||+++++|+.+.+++++.+.||+|+|++|+. ..+.||+||.+..++.|++++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 38999999999999999999999999999999999999999999973 125799999999999999988
Q ss_pred CCCCCCCCC------cccCCC-------------cccC--C--------CC----------------Ccce---------
Q 018649 214 GLHKEEDYP------YIMEEG-------------TCEM--T--------KG----------------ESEV--------- 239 (352)
Q Consensus 214 Gi~~e~~yP------Y~~~~~-------------~C~~--~--------~~----------------~~~~--------- 239 (352)
|+++|++|| +...+. .+.. . .. .+..
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 221100 0000 0 00 0000
Q ss_pred ---------EEecceEec--------------C-C----------CCHHHHHH----HHhcC-CeEEEEEeccccccccc
Q 018649 240 ---------VTINGYHDV--------------P-Q----------NSEDSLLK----ALANQ-PLSVAIEASGRDFQFYS 280 (352)
Q Consensus 240 ---------~~i~~~~~v--------------~-~----------~~~~~i~~----~l~~g-PV~v~~~~~~~~f~~y~ 280 (352)
..+..|..+ . . -..+.|++ +|.+| ||..+.++....|. +
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~--~ 257 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT--R 257 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC--T
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC--C
Confidence 001112111 0 0 02444544 45677 99999999833444 7
Q ss_pred CceeeCCC-----------------------------------------------CCCCCeEEEEEEeee-cCCccEEEE
Q 018649 281 GGVYDGHC-----------------------------------------------GTQLDHGVAAVGYGS-TRGLDYIIV 312 (352)
Q Consensus 281 ~Gi~~~~~-----------------------------------------------~~~~~Hav~iVGyg~-~~g~~ywiv 312 (352)
.||...+. .+..+|||+|||||. ++|++||+|
T Consensus 258 ~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~v 337 (383)
T 3pw3_A 258 DGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMV 337 (383)
T ss_dssp TSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEE
T ss_pred CceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEE
Confidence 88873210 123479999999997 478899999
Q ss_pred EcCCCCCCCCCceEEEEcc
Q 018649 313 KNSWGPKWGEKGYIRMKRN 331 (352)
Q Consensus 313 kNSWG~~WGe~Gy~~i~~~ 331 (352)
|||||++||++||++|+++
T Consensus 338 kNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 338 KNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp ECSBCSCSTTTTEEEEEHH
T ss_pred EeCCCCCCCcCCeEEecHH
Confidence 9999999999999999975
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.79 E-value=3.2e-19 Score=140.34 Aligned_cols=76 Identities=34% Similarity=0.586 Sum_probs=70.3
Q ss_pred CCChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEcccCCCCCHHHHHHHHhCCCC
Q 018649 38 LTSNDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRKIKNYWLGLNEFADLRHEEFKEMFLGLKP 113 (352)
Q Consensus 38 ~~~~~~~~~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~~~s~~~g~N~FsDlt~~E~~~~~~~~~~ 113 (352)
..++..+...|++|+.+|+|.|.+..|+..|+.||++|++.|++||+++.+|++|+|+|+|||.+||++.+++.+.
T Consensus 15 ~~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 15 EWKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp -CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCCTTTTCCHHHHHHHSCCBCC
T ss_pred ccCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCcccccCCHHHHHHHHcCCCC
Confidence 3567889999999999999999988899999999999999999999988999999999999999999999987654
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.71 E-value=8.7e-18 Score=126.27 Aligned_cols=65 Identities=35% Similarity=0.587 Sum_probs=59.4
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCcEEEEcccCCCCCHHHHHHHHhCCC
Q 018649 46 DLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRK----IKNYWLGLNEFADLRHEEFKEMFLGLK 112 (352)
Q Consensus 46 ~~f~~~~~~y~k~Y~~~~E~~~R~~~F~~n~~~I~~~N~~----~~s~~~g~N~FsDlt~~E~~~~~~~~~ 112 (352)
..|++|+.+|+|.|.+..|+..| .||.+|++.|++||++ ..+|++|+|+|+|||.+|| +.++|.+
T Consensus 8 ~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 8 EEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 47999999999999888888999 9999999999999985 4689999999999999999 8887754
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.44 E-value=0.0029 Score=52.98 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=87.1
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHH--------hCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q 018649 150 KNQGSCGSCWAFSTVAAVEGINQIV--------TGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTGGLHKEEDY 221 (352)
Q Consensus 150 kdQg~cgsCwAfA~~~~lE~~~~~~--------~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y 221 (352)
..||.-+-|-+|+.++.|-+..... +.-...+|+|+|.++ |..+...++|.+.. |..+
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t---------~~~~~q~Iky~~s~-G~~~---- 90 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQ-GRDI---- 90 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC---------CBCHHHHHHHHHHT-TCCC----
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHc-CcCh----
Confidence 4699999999999999887754211 111366777777663 45788999999865 3211
Q ss_pred CcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhc-CCeEEEEEecccccccccCceeeCCCCCCCCeEEEEEE
Q 018649 222 PYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALAN-QPLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVG 300 (352)
Q Consensus 222 PY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVG 300 (352)
. +.. ...+.+++++.+.+ .||.|...-. +........+||++|||
T Consensus 91 ----------------~-~~n------r~ls~neV~~~i~~Nk~I~v~~~~v-----------~e~~~~~~~gHA~av~G 136 (183)
T 1pxv_A 91 ----------------H-YQE------GVPSYNQVDQLTKDNVGIMILAQSV-----------SQNPNDPHLGHALAVVG 136 (183)
T ss_dssp ----------------E-EEE------SCCCHHHHHHHHHTTCCEEEEEECC-----------CSSTTSCCCEEEEEEEE
T ss_pred ----------------h-Hhc------CCCCHHHHHHHHhcCCcEEEEcccc-----------ccCCCCccCceeEEEEe
Confidence 0 010 12367889999965 5998875432 12223336789999999
Q ss_pred eeecCCccEEEEEcCCCCCCCCCceEEEEcc
Q 018649 301 YGSTRGLDYIIVKNSWGPKWGEKGYIRMKRN 331 (352)
Q Consensus 301 yg~~~g~~ywivkNSWG~~WGe~Gy~~i~~~ 331 (352)
|-.-++.++.+|=|=|-. |++-++-+
T Consensus 137 ya~~~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 137 NAKINDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp EEEETTEEEEEEECTTCS-----SCEEEETT
T ss_pred eeecCCCeEEEEeCCccC-----CcEeecCC
Confidence 998888889999887743 67666643
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.06 E-value=0.022 Score=47.52 Aligned_cols=119 Identities=16% Similarity=0.197 Sum_probs=81.5
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHH--------HhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q 018649 150 KNQGSCGSCWAFSTVAAVEGINQI--------VTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTGGLHKEEDY 221 (352)
Q Consensus 150 kdQg~cgsCwAfA~~~~lE~~~~~--------~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y 221 (352)
..||.-+-|-+|+.+++|-+.... .+.....+|+++|..+. ..+...++|+++. |-.
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~---------~t~~e~iky~~s~-g~~----- 80 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG---------LTPREMIYFGQTQ-GRS----- 80 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC---------CCHHHHHHHHHHT-TCC-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC---------CCHHHHHHHHHHc-CCC-----
Confidence 469999999999999998875421 11224789999998654 4678899998776 210
Q ss_pred CcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHhcC-CeEEEEEecccccccccCceeeCCCCCCCCeEEEEEE
Q 018649 222 PYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQ-PLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVG 300 (352)
Q Consensus 222 PY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVG 300 (352)
. . +. -...+.+++++.+.++ |+.+..+-. +. +.....+|||+|||
T Consensus 81 ------------~---~------~~-n~~ls~~eV~~~~~~nk~i~i~~~~v-e~-----------~~~~~~gHAlav~G 126 (174)
T 1cv8_A 81 ------------P---Q------LL-NRMTTYNEVDNLTKNNKGIAILGSRV-ES-----------RNGMHAGHAMAVVG 126 (174)
T ss_dssp ------------C---E------EE-SSCCCHHHHHHHHHTTCCEEEEEEES-SC-----------BTTBCCEEEEEEEE
T ss_pred ------------h---h------hh-cCCCCHHHHHHHHhcCCceEEEcccc-cC-----------CCCCCCceeEEEEe
Confidence 0 0 00 0123568889999665 988776543 11 11235689999999
Q ss_pred eeec-CCccEEEEEcCCC
Q 018649 301 YGST-RGLDYIIVKNSWG 317 (352)
Q Consensus 301 yg~~-~g~~ywivkNSWG 317 (352)
|-.- +|.+|.++=|=|-
T Consensus 127 y~~~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 127 NAKLNNGQEVIIIWNPWD 144 (174)
T ss_dssp EEEETTSCEEEEEECTTC
T ss_pred eeeecCCceEEEEeCCcc
Confidence 9874 6789999988874
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.02 E-value=0.012 Score=54.40 Aligned_cols=128 Identities=20% Similarity=0.286 Sum_probs=83.9
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHH--------HhCCCCCCCHHHHHhhcCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC
Q 018649 150 KNQGSCGSCWAFSTVAAVEGINQI--------VTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTGGLHKEEDY 221 (352)
Q Consensus 150 kdQg~cgsCwAfA~~~~lE~~~~~--------~~~~~~~lS~q~l~dc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y 221 (352)
..||.-+-|-+||.+++|-+.... .+.-...+|+++|.++ |..+...++|+++. |.-
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~qsy-G~~----- 265 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQ-GRD----- 265 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHHHT-TEE-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHh-Ccc-----
Confidence 469999999999999988764321 1112356777777663 45788999998754 321
Q ss_pred CcccCCCcccCCCCCcceEEecceEecCCCCHHHHHHHHh-cCCeEEEEEecccccccccCceeeCCCCCCCCeEEEEEE
Q 018649 222 PYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALA-NQPLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVG 300 (352)
Q Consensus 222 PY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVG 300 (352)
+. +.. ...+.+.+++.+. +.||.|.+....+. ......+|||+|||
T Consensus 266 --------------------~~-~~n-~~ls~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavvG 312 (367)
T 1x9y_A 266 --------------------IH-YQE-GVPSYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVVG 312 (367)
T ss_dssp --------------------EE-EEE-SCCCHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEEE
T ss_pred --------------------hh-hhc-CCCCHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEEe
Confidence 11 111 1236688888885 45999887654111 12235689999999
Q ss_pred eeecCCccEEEEEcCCCCCCCCCceEEEEc
Q 018649 301 YGSTRGLDYIIVKNSWGPKWGEKGYIRMKR 330 (352)
Q Consensus 301 yg~~~g~~ywivkNSWG~~WGe~Gy~~i~~ 330 (352)
|-..++.+|.++=|=|-. +++-++-
T Consensus 313 yA~~~~~~~y~~WNPW~~-----~~~~~sa 337 (367)
T 1x9y_A 313 NAKINDQEKLIYWNPWDT-----ELSIQDA 337 (367)
T ss_dssp EEEETTEEEEEEECTTCS-----SCEEEET
T ss_pred ccccCCCcEEEEecCccC-----CceeecC
Confidence 977778889999777743 3555544
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=92.40 E-value=0.46 Score=42.05 Aligned_cols=63 Identities=21% Similarity=0.374 Sum_probs=38.4
Q ss_pred ecCCCCHHHHHHHHhcC-CeEEEEEeccc-----ccccc--cCceeeCCCCCCCCeEEEEEEeeecCCccEEEEEcCC
Q 018649 247 DVPQNSEDSLLKALANQ-PLSVAIEASGR-----DFQFY--SGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSW 316 (352)
Q Consensus 247 ~v~~~~~~~i~~~l~~g-PV~v~~~~~~~-----~f~~y--~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSW 316 (352)
.++..+.++|++.|.+| ||+|-....-. .|..+ .+|-... ...+|+|+|+||+.. ..+|-+.+
T Consensus 126 dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~---~~~~H~VVl~GYd~~----~vyi~DP~ 196 (236)
T 3erv_A 126 DLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI---TYNEHCVVLIGYDQE----SVYIRDPL 196 (236)
T ss_dssp ECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE---CTTEEEEEEEEECSS----EEEEECTT
T ss_pred ecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee---ccCCeEEEEEEEeCC----EEEEECCC
Confidence 44556899999999988 99997654210 11111 1221110 134799999999863 44555555
No 50
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=64.60 E-value=15 Score=34.59 Aligned_cols=55 Identities=20% Similarity=0.353 Sum_probs=37.0
Q ss_pred HHHHHHHHhcC-CeEEEEEecccccccccCceeeCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEc
Q 018649 253 EDSLLKALANQ-PLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKR 330 (352)
Q Consensus 253 ~~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~ 330 (352)
.+.|+..|.++ ||.+.-.-. .++||.+|=||..+ +||=|==.||-. .+|||.+.-
T Consensus 289 ~~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~~---~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 289 EAQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADGR---NFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECSS---SEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccCC---CeEEEEeCcCCC--CCcceeccC
Confidence 35688888765 987643211 15899999999864 577765444422 589999853
No 51
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=60.77 E-value=15 Score=32.65 Aligned_cols=54 Identities=22% Similarity=0.420 Sum_probs=37.6
Q ss_pred HHHHHHHHhcC-CeEEEEEecccccccccCceeeCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCC-CCceEEEEc
Q 018649 253 EDSLLKALANQ-PLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWG-EKGYIRMKR 330 (352)
Q Consensus 253 ~~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG-e~Gy~~i~~ 330 (352)
.+.|+.+|.++ ||.+.-.- +.++||.+|=||..+ +|+-|==.|| | .+|||.+.-
T Consensus 171 ~~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~---~~~H~NwGWg---G~~nGYy~l~~ 226 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR---NFYHVNWGWG---GVSDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS---SCEEEECSST---TTTCEEECTTC
T ss_pred HHHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC---CEEEEEcCCC---CCCCceeeccc
Confidence 36788889766 99876421 145899999999864 5777643444 2 589999854
No 52
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=59.83 E-value=16 Score=33.55 Aligned_cols=59 Identities=20% Similarity=0.402 Sum_probs=37.2
Q ss_pred HHHHHHHhcC-CeEEEEEecccccccccCceeeCCCCCCCCeEEEEEEeeecCCccEEEEEcCCCCCCCCCceEEEEc
Q 018649 254 DSLLKALANQ-PLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKR 330 (352)
Q Consensus 254 ~~i~~~l~~g-PV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~~ 330 (352)
+.|+..|.++ ||.+.-.-. .. . ...++||.+|=||..+ +||=|==.||-. .+|||.+.-
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~--~~------~-----~~~~GHafV~DGY~~~---~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP--GS------M-----GQDAGHAFVIDGYNKA---GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT---SCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEecC--CC------C-----CCCCceEEEEccccCC---CeEEEecCCCCC--CCceEeccC
Confidence 4678888766 987643211 11 1 1356899999999864 577775555421 389999864
No 53
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=26.34 E-value=26 Score=24.79 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=20.5
Q ss_pred CCccccCCCcchHHHHHHHHHHHHHHHHH
Q 018649 146 VTHVKNQGSCGSCWAFSTVAAVEGINQIV 174 (352)
Q Consensus 146 v~pVkdQg~cgsCwAfA~~~~lE~~~~~~ 174 (352)
+--|+=||.|++| ......+|..++..
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~~ 63 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLREK 63 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHHH
Confidence 4468889999999 45556888887754
No 54
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=21.74 E-value=86 Score=28.77 Aligned_cols=37 Identities=24% Similarity=0.572 Sum_probs=0.0
Q ss_pred CeEEEEEEeeec----CCccEEEEEcCCC-CCCC-------------------------CCceEEEE
Q 018649 293 DHGVAAVGYGST----RGLDYIIVKNSWG-PKWG-------------------------EKGYIRMK 329 (352)
Q Consensus 293 ~Hav~iVGyg~~----~g~~ywivkNSWG-~~WG-------------------------e~Gy~~i~ 329 (352)
+||=.|++.... .+...-.|||-|| ..|- ++|-|||+
T Consensus 246 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 246 GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEE
Done!