Citrus Sinensis ID: 018649

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350--
MALSSQFKTILISFCISFFIRSSFARDFSIVGYSPEDLTSNDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRKIKNYWLGLNEFADLRHEEFKEMFLGLKPDLARRKDQSHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKKK
cccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHcccEEEEECcccccccccccccccccccccccEEEEEEEccccccccEEEEEcccccccccccEEEEEccccccccccccccccccccccc
******FKTILISFCISFFIRSSFARDFSIVGYSPEDLTSNDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRKIKNYWLGLNEFADLRHEEFKEMFLGLKP************FSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKK*
xxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MALSSQFKTILISFCISFFIRSSFARDFSIVGYSPEDLTSNDKLIDLFESWMSKFEKVYESLDEKLERFEIFKDNLRHIDETNRKIKNYWLGLNEFADLRHEEFKEMFLGLKPDLARRKDQSHEDFSYKDVVDLPKSVDWRKKGAVTHVKNQGSCGSCWAFSTVAAVEGINQIVTGNLASLSEQELIDCDNTYNNGCNGGLMDYAFQYIVSTGGLHKEEDYPYIMEEGTCEMTKGESEVVTINGYHDVPQNSEDSLLKALANQPLSVAIEASGRDFQFYSGGVYDGHCGTQLDHGVAAVGYGSTRGLDYIIVKNSWGPKWGEKGYIRMKRNTGKPEGLCGINKMASYPIKKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Xylem cysteine proteinase 2 Probable thiol protease.confidentQ9LM66
Cysteine proteinase EP-B 1 probableP25249
Cathepsin L1 Important for the overall degradation of proteins in lysosomes.probableP25975

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.22.-Cysteine endopeptidases.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FO5, chain A
Confidence level:very confident
Coverage over the Query: 133-351
View the alignment between query and template
View the model in PyMOL
Template: 1PCI, chain A
Confidence level:very confident
Coverage over the Query: 38-351
View the alignment between query and template
View the model in PyMOL