Query 018650
Match_columns 352
No_of_seqs 182 out of 682
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 02:52:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018650.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018650hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2922 Uncharacterized conser 100.0 9E-73 2E-77 533.3 15.1 299 2-301 14-312 (335)
2 PF05653 Mg_trans_NIPA: Magnes 100.0 1.1E-65 2.4E-70 494.5 23.7 298 3-301 1-298 (300)
3 TIGR03340 phn_DUF6 phosphonate 99.4 1.8E-10 3.9E-15 109.8 23.2 254 11-293 3-281 (281)
4 PRK02971 4-amino-4-deoxy-L-ara 99.2 6.6E-11 1.4E-15 100.9 9.3 116 9-124 2-121 (129)
5 PRK11453 O-acetylserine/cystei 99.2 9.8E-09 2.1E-13 98.8 23.5 262 12-298 7-290 (299)
6 PRK15430 putative chlorampheni 99.1 2.2E-08 4.8E-13 96.2 23.5 249 4-290 3-280 (296)
7 TIGR00950 2A78 Carboxylate/Ami 99.1 4.6E-08 1E-12 91.2 21.8 205 57-290 51-259 (260)
8 PF06027 DUF914: Eukaryotic pr 99.0 1.3E-07 2.8E-12 92.8 24.9 231 49-300 73-310 (334)
9 PLN00411 nodulin MtN21 family 99.0 9.9E-08 2.2E-12 94.6 24.2 217 67-300 92-333 (358)
10 PRK11689 aromatic amino acid e 99.0 5.5E-07 1.2E-11 86.5 25.5 260 10-295 5-287 (295)
11 PRK11272 putative DMT superfam 98.9 2.8E-07 6.1E-12 88.4 21.3 211 58-298 74-288 (292)
12 PRK10532 threonine and homoser 98.9 1.4E-06 3.1E-11 83.6 25.8 257 6-298 9-284 (293)
13 PRK15051 4-amino-4-deoxy-L-ara 98.9 1.7E-08 3.7E-13 83.9 10.1 103 12-124 4-108 (111)
14 TIGR00817 tpt Tpt phosphate/ph 98.8 6.2E-07 1.3E-11 86.2 20.9 223 57-300 70-298 (302)
15 TIGR00776 RhaT RhaT L-rhamnose 98.8 8.5E-07 1.8E-11 85.3 21.6 222 53-296 56-289 (290)
16 COG0697 RhaT Permeases of the 98.8 4.9E-06 1.1E-10 77.7 26.1 212 57-296 74-288 (292)
17 COG2510 Predicted membrane pro 98.6 2.9E-07 6.2E-12 77.7 8.2 113 11-124 5-138 (140)
18 PTZ00343 triose or hexose phos 98.5 3.2E-05 6.9E-10 76.4 22.3 59 66-124 127-185 (350)
19 PF13536 EmrE: Multidrug resis 98.4 2E-06 4.4E-11 71.1 9.9 66 59-125 41-106 (113)
20 TIGR00688 rarD rarD protein. T 98.4 0.00013 2.7E-09 68.4 23.0 62 63-124 80-141 (256)
21 PF10639 UPF0546: Uncharacteri 98.4 3.5E-07 7.7E-12 76.1 4.7 104 20-123 7-112 (113)
22 PF08449 UAA: UAA transporter 98.4 0.00014 3.1E-09 70.1 23.1 222 60-297 71-299 (303)
23 PF06800 Sugar_transport: Suga 98.3 8.5E-05 1.9E-09 70.8 18.6 213 54-292 43-268 (269)
24 PRK10532 threonine and homoser 98.2 1.1E-05 2.3E-10 77.6 10.2 127 7-133 146-289 (293)
25 KOG4510 Permease of the drug/m 98.1 4.5E-06 9.8E-11 78.7 6.5 266 8-299 37-329 (346)
26 PRK10452 multidrug efflux syst 98.1 2.9E-05 6.4E-10 65.4 10.4 74 56-129 33-107 (120)
27 PRK09541 emrE multidrug efflux 98.1 5.1E-05 1.1E-09 63.0 11.2 95 16-127 9-105 (110)
28 PRK13499 rhamnose-proton sympo 98.1 0.00038 8.3E-09 68.7 19.1 121 3-127 1-155 (345)
29 PF04142 Nuc_sug_transp: Nucle 98.0 0.00081 1.7E-08 63.4 18.3 71 58-128 22-92 (244)
30 TIGR00950 2A78 Carboxylate/Ami 97.9 9.9E-05 2.1E-09 68.7 10.8 116 5-120 124-259 (260)
31 PLN00411 nodulin MtN21 family 97.8 0.00015 3.4E-09 71.9 10.4 119 6-125 186-328 (358)
32 PRK10650 multidrug efflux syst 97.8 0.00049 1.1E-08 57.1 11.5 100 7-123 5-106 (109)
33 PF00893 Multi_Drug_Res: Small 97.7 0.00024 5.1E-09 57.1 9.1 85 15-116 7-93 (93)
34 PF00892 EamA: EamA-like trans 97.7 5.1E-05 1.1E-09 61.9 4.5 69 56-124 57-125 (126)
35 PRK11689 aromatic amino acid e 97.7 0.00025 5.5E-09 68.1 9.7 116 7-124 154-286 (295)
36 PRK11272 putative DMT superfam 97.6 0.00034 7.4E-09 67.0 10.0 118 6-124 147-284 (292)
37 PRK15051 4-amino-4-deoxy-L-ara 97.5 0.0024 5.2E-08 53.0 12.0 80 210-296 31-110 (111)
38 PRK11431 multidrug efflux syst 97.4 0.0019 4.1E-08 53.2 10.7 72 52-123 27-100 (105)
39 PRK11453 O-acetylserine/cystei 97.4 0.0013 2.9E-08 63.2 10.9 117 7-123 141-285 (299)
40 COG2510 Predicted membrane pro 97.4 0.0014 3.1E-08 55.6 9.3 76 212-295 63-139 (140)
41 PRK09541 emrE multidrug efflux 97.3 0.0066 1.4E-07 50.4 12.1 80 209-297 26-105 (110)
42 KOG2234 Predicted UDP-galactos 97.2 0.063 1.4E-06 52.8 19.8 70 55-124 94-163 (345)
43 COG2076 EmrE Membrane transpor 97.1 0.0059 1.3E-07 50.3 10.1 72 52-123 28-101 (106)
44 COG2962 RarD Predicted permeas 97.1 0.22 4.8E-06 48.0 22.1 120 5-124 3-143 (293)
45 TIGR03340 phn_DUF6 phosphonate 97.1 0.00066 1.4E-08 64.6 5.1 115 8-122 143-280 (281)
46 PRK02971 4-amino-4-deoxy-L-ara 97.1 0.0096 2.1E-07 50.8 11.3 71 221-298 53-125 (129)
47 PRK11431 multidrug efflux syst 97.0 0.014 3.1E-07 48.0 11.6 79 209-296 25-103 (105)
48 PRK10452 multidrug efflux syst 97.0 0.018 4E-07 48.5 12.0 71 222-298 36-106 (120)
49 COG0697 RhaT Permeases of the 96.9 0.0048 1E-07 57.5 9.2 117 7-124 152-286 (292)
50 COG2076 EmrE Membrane transpor 96.8 0.028 6.1E-07 46.3 11.2 78 210-296 27-104 (106)
51 PRK10650 multidrug efflux syst 96.7 0.03 6.5E-07 46.4 11.3 77 209-294 31-107 (109)
52 PRK15430 putative chlorampheni 96.5 0.005 1.1E-07 59.2 6.3 62 64-125 224-285 (296)
53 PF00893 Multi_Drug_Res: Small 95.9 0.073 1.6E-06 42.6 8.9 63 210-277 26-88 (93)
54 TIGR00776 RhaT RhaT L-rhamnose 95.8 0.025 5.4E-07 54.4 6.9 116 7-124 150-287 (290)
55 COG5006 rhtA Threonine/homoser 95.6 0.11 2.3E-06 49.3 10.0 124 5-128 144-285 (292)
56 PF06027 DUF914: Eukaryotic pr 95.5 0.057 1.2E-06 53.3 8.3 127 4-131 163-311 (334)
57 TIGR00817 tpt Tpt phosphate/ph 95.4 0.028 6E-07 54.0 5.9 119 5-124 141-292 (302)
58 PF13536 EmrE: Multidrug resis 95.4 0.28 6.2E-06 40.2 11.0 69 224-300 43-111 (113)
59 PF00892 EamA: EamA-like trans 95.3 0.047 1E-06 44.1 6.0 67 221-294 59-125 (126)
60 PF03151 TPT: Triose-phosphate 95.3 0.13 2.7E-06 43.9 8.9 113 10-122 1-150 (153)
61 KOG2765 Predicted membrane pro 95.3 0.94 2E-05 45.2 15.7 202 71-300 177-395 (416)
62 KOG3912 Predicted integral mem 95.2 1.4 3E-05 42.7 16.2 71 56-126 89-159 (372)
63 PF06800 Sugar_transport: Suga 94.9 0.24 5.2E-06 47.5 10.2 86 213-301 42-128 (269)
64 KOG1441 Glucose-6-phosphate/ph 93.7 0.18 4E-06 49.3 6.9 61 64-124 94-154 (316)
65 TIGR00803 nst UDP-galactose tr 93.1 0.32 6.9E-06 44.5 7.2 116 6-121 82-220 (222)
66 COG1742 Uncharacterized conser 91.9 0.87 1.9E-05 37.3 7.3 49 81-130 60-108 (109)
67 PRK02237 hypothetical protein; 90.9 1.3 2.9E-05 36.5 7.5 48 81-129 61-108 (109)
68 KOG4831 Unnamed protein [Funct 90.8 0.34 7.3E-06 39.9 3.9 77 47-124 46-124 (125)
69 PF10639 UPF0546: Uncharacteri 89.7 1.3 2.7E-05 37.1 6.6 52 235-292 60-111 (113)
70 KOG1580 UDP-galactose transpor 89.5 19 0.00042 34.1 15.1 210 56-292 88-310 (337)
71 KOG1583 UDP-N-acetylglucosamin 89.0 10 0.00023 36.6 12.9 232 55-298 66-317 (330)
72 COG4975 GlcU Putative glucose 88.5 0.31 6.8E-06 46.0 2.4 221 51-297 54-287 (288)
73 KOG4314 Predicted carbohydrate 88.4 15 0.00032 34.0 12.9 59 67-125 67-125 (290)
74 COG5006 rhtA Threonine/homoser 86.4 32 0.00069 33.0 17.9 183 68-280 86-271 (292)
75 PRK13499 rhamnose-proton sympo 85.5 4.4 9.4E-05 40.3 8.6 75 223-298 81-156 (345)
76 PF08449 UAA: UAA transporter 85.4 5.3 0.00011 38.4 9.1 114 8-122 153-294 (303)
77 PTZ00343 triose or hexose phos 84.3 2.8 6.1E-05 41.4 6.8 52 72-123 295-346 (350)
78 KOG0569 Permease of the major 84.2 33 0.00072 35.7 14.8 32 164-195 81-112 (485)
79 PF02694 UPF0060: Uncharacteri 83.9 1.5 3.3E-05 36.1 3.9 47 82-129 60-106 (107)
80 TIGR00803 nst UDP-galactose tr 83.5 25 0.00054 31.9 12.3 57 228-291 164-220 (222)
81 PF06379 RhaT: L-rhamnose-prot 83.4 50 0.0011 32.8 21.3 285 3-295 1-340 (344)
82 PF05653 Mg_trans_NIPA: Magnes 82.9 6 0.00013 38.5 8.3 80 210-300 48-127 (300)
83 COG4975 GlcU Putative glucose 81.9 1.3 2.7E-05 42.1 3.0 70 226-298 70-139 (288)
84 PF01306 LacY_symp: LacY proto 78.3 21 0.00045 36.4 10.7 75 84-158 145-232 (412)
85 PF04142 Nuc_sug_transp: Nucle 76.8 24 0.00052 33.2 10.0 111 5-115 110-243 (244)
86 COG3169 Uncharacterized protei 76.2 25 0.00053 28.8 8.3 107 3-123 4-113 (116)
87 PF07857 DUF1632: CEO family ( 73.8 13 0.00028 35.5 7.3 49 251-300 86-139 (254)
88 PF06966 DUF1295: Protein of u 71.6 20 0.00044 33.4 8.1 60 7-67 121-186 (235)
89 KOG2765 Predicted membrane pro 71.5 9.7 0.00021 38.2 6.0 122 6-127 244-392 (416)
90 PF04342 DUF486: Protein of un 67.7 4.9 0.00011 33.1 2.6 92 11-122 4-105 (108)
91 KOG2766 Predicted membrane pro 67.5 2.1 4.6E-05 40.8 0.6 59 71-129 96-154 (336)
92 PF04657 DUF606: Protein of un 62.8 28 0.0006 29.8 6.6 66 57-122 68-138 (138)
93 PF11970 Git3_C: G protein-cou 61.6 16 0.00035 28.2 4.4 50 241-290 12-61 (76)
94 PF15048 OSTbeta: Organic solu 57.6 16 0.00034 31.0 3.9 42 259-300 20-61 (125)
95 TIGR00688 rarD rarD protein. T 56.8 52 0.0011 30.4 7.9 58 230-294 84-141 (256)
96 COG2962 RarD Predicted permeas 55.6 74 0.0016 30.9 8.6 70 210-282 66-135 (293)
97 PF05977 MFS_3: Transmembrane 54.1 2.8E+02 0.0061 29.0 15.2 48 243-291 342-389 (524)
98 PF03601 Cons_hypoth698: Conse 53.4 2.3E+02 0.0049 27.7 12.7 75 54-128 60-135 (305)
99 TIGR00881 2A0104 phosphoglycer 50.1 2.2E+02 0.0047 26.6 11.2 18 165-182 52-69 (379)
100 COG4858 Uncharacterized membra 45.0 1.6E+02 0.0035 26.9 8.5 92 7-109 123-220 (226)
101 PF06570 DUF1129: Protein of u 44.7 1.2E+02 0.0027 27.5 8.1 87 10-108 112-204 (206)
102 KOG1581 UDP-galactose transpor 43.8 3.3E+02 0.0072 26.9 18.1 193 63-270 93-294 (327)
103 KOG4510 Permease of the drug/m 41.6 52 0.0011 31.9 5.1 63 225-297 109-171 (346)
104 KOG2922 Uncharacterized conser 40.4 17 0.00037 35.7 1.8 83 207-300 59-141 (335)
105 PF06609 TRI12: Fungal trichot 40.4 5E+02 0.011 27.9 14.3 14 57-70 112-125 (599)
106 PRK02983 lysS lysyl-tRNA synth 39.2 5.1E+02 0.011 30.0 13.4 24 52-75 74-97 (1094)
107 PF11368 DUF3169: Protein of u 33.3 1.3E+02 0.0028 28.2 6.5 16 176-191 12-27 (248)
108 PF06157 DUF973: Protein of un 33.0 4.6E+02 0.01 25.4 12.2 32 7-38 45-76 (285)
109 COG2271 UhpC Sugar phosphate p 31.9 6E+02 0.013 26.3 13.1 29 273-301 183-211 (448)
110 KOG1580 UDP-galactose transpor 31.7 43 0.00093 31.9 2.9 39 90-128 278-316 (337)
111 KOG4255 Uncharacterized conser 31.2 90 0.002 31.3 5.1 22 277-298 197-218 (439)
112 KOG1441 Glucose-6-phosphate/ph 28.8 33 0.0007 33.8 1.7 30 5-34 159-188 (316)
113 PRK03893 putative sialic acid 28.6 6E+02 0.013 25.3 11.2 8 167-174 335-342 (496)
114 COG5522 Predicted integral mem 28.2 4.7E+02 0.01 24.4 8.9 53 66-118 103-164 (236)
115 PF08507 COPI_assoc: COPI asso 28.1 1.4E+02 0.0031 25.1 5.4 16 275-290 85-100 (136)
116 TIGR02106 cyd_oper_ybgT cyd op 23.6 1.1E+02 0.0024 19.5 2.8 22 4-25 3-24 (30)
117 PF04531 Phage_holin_1: Bacter 22.9 2.6E+02 0.0056 21.9 5.5 22 50-71 7-28 (84)
118 KOG1442 GDP-fucose transporter 22.9 46 0.00099 32.4 1.4 58 65-122 114-171 (347)
119 PF03151 TPT: Triose-phosphate 22.9 4.3E+02 0.0094 21.7 14.2 49 237-292 102-150 (153)
120 PF08173 YbgT_YccB: Membrane b 22.9 1.2E+02 0.0025 19.1 2.8 22 4-25 3-24 (28)
121 COG3238 Uncharacterized protei 22.2 1.5E+02 0.0033 25.9 4.5 38 85-122 102-143 (150)
122 PRK06638 NADH:ubiquinone oxido 21.8 6E+02 0.013 23.0 10.5 34 259-298 134-169 (198)
123 PRK15015 carbon starvation pro 20.4 1.1E+03 0.023 26.0 11.0 40 82-121 188-234 (701)
124 PRK12911 bifunctional preprote 20.1 1.4E+03 0.03 27.3 12.3 64 56-122 912-975 (1403)
No 1
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=9e-73 Score=533.33 Aligned_cols=299 Identities=68% Similarity=1.154 Sum_probs=293.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhHH
Q 018650 2 AFSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVL 81 (352)
Q Consensus 2 ~~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~sl 81 (352)
.|+++|++|++||+.||++++.++++|||+++|.+.. +.|++.++++|+++|+||+|+++|++|+++||+||+|||+++
T Consensus 14 ~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~-~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAPasL 92 (335)
T KOG2922|consen 14 RMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGAS-GLRAGEGGYGYLKEPLWWAGMLTMIVGEIANFAAYAFAPASL 92 (335)
T ss_pred hhccCceeeeeehhhccEEEeeehhhhHHHHHHHhhh-cccccCCCcchhhhHHHHHHHHHHHHHhHhhHHHHhhchHhh
Confidence 3789999999999999999999999999999998885 889998999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHH
Q 018650 82 VTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFI 161 (352)
Q Consensus 82 v~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~~~~ 161 (352)
|+|||++++++++++|+++||||++..+.+||++|++|++++|+|+|++++..|++|+|+++++|+|++|+.+.++++++
T Consensus 93 VtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~i 172 (335)
T KOG2922|consen 93 VTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLI 172 (335)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 018650 162 LIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFN 241 (352)
Q Consensus 162 l~~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~ 241 (352)
+++++.||+|++|+++|.++|+++|++|++++|+++++++++++|++|+.||.+|+++.+++.|+..|++|||||||.||
T Consensus 173 l~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fn 252 (335)
T KOG2922|consen 173 LIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFN 252 (335)
T ss_pred HheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 018650 242 TAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFER 301 (352)
Q Consensus 242 a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~~~ 301 (352)
++++.|+||++||++++++|.|+|+||++++..++.+++||+++++.|+++|+++||++.
T Consensus 253 tslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~ 312 (335)
T KOG2922|consen 253 TSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEI 312 (335)
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccc
Confidence 999999999999999999999999999999999999999999999999999999999884
No 2
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=1.1e-65 Score=494.48 Aligned_cols=298 Identities=47% Similarity=0.873 Sum_probs=285.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhHHH
Q 018650 3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLV 82 (352)
Q Consensus 3 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv 82 (352)
|-+++++|+++|++||++++.|.++|||+++|+++. +.|++.+.++|++||+||+|++++++|+++|++||+++|+++|
T Consensus 1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~-~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv 79 (300)
T PF05653_consen 1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG-SLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLV 79 (300)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHH
Confidence 568999999999999999999999999999998874 5665555789999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHH
Q 018650 83 TPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFIL 162 (352)
Q Consensus 83 ~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~~~~l 162 (352)
||++++++++|+++|+++||||++++|++|++++++|+++++.++|++++.+|++|+++++.+|+|+.|+.+..+..+++
T Consensus 80 ~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L 159 (300)
T PF05653_consen 80 APLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILIL 159 (300)
T ss_pred HHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888877777
Q ss_pred HHhhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 018650 163 IFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNT 242 (352)
Q Consensus 163 ~~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a 242 (352)
+++..||+|++++++|.++||++|++|++++|++++.++++++|++||.||.+|+++++.+.|++.|++||||||++||+
T Consensus 160 ~~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~ 239 (300)
T PF05653_consen 160 IFFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDT 239 (300)
T ss_pred HHhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 78888899999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 018650 243 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFER 301 (352)
Q Consensus 243 ~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~~~ 301 (352)
++++|++|++||++++++|.++||||+++++.++.++.+|+++++.|+++|+++||+++
T Consensus 240 ~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~ 298 (300)
T PF05653_consen 240 SLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEI 298 (300)
T ss_pred eEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhc
Confidence 99999999999999999999999999999999999999999999999999999999774
No 3
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.37 E-value=1.8e-10 Score=109.80 Aligned_cols=254 Identities=16% Similarity=0.185 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-----------c----ccCCcccccccchhH---HHHHHHHHHHHHHHHH
Q 018650 11 FVLALLSSFFIGSSFIIKKKGLRRAAAASG-----------V----RAGVGGFTYLLEPLW---WVGMAIMIVGEVANFV 72 (352)
Q Consensus 11 v~LAl~ss~~~a~g~vlqk~~~~~~~~~~~-----------~----~~~~~~~~~l~~p~W---~~G~~l~~~g~~~~~~ 72 (352)
+++.+.++++.+..+++.|+...++..--. + +.....++..++..| ..+.........+.+.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQ 82 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 578889999999999999976544322100 0 000000111111122 1233344566778888
Q ss_pred HHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHH
Q 018650 73 AYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYV 152 (352)
Q Consensus 73 Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl~y~ 152 (352)
++...|.+.++|+...+.+++.+++.+++|||+++++|.|+.+++.|+.++.. ++.+. .+. .+ ..+.
T Consensus 83 a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~~~~-~~~---------~g-~~~~ 149 (281)
T TIGR03340 83 AYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL--SRFAQ-HRR---------KA-YAWA 149 (281)
T ss_pred HHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--ccccc-cch---------hH-HHHH
Confidence 99999999999999999999999999999999999999999999999987653 22211 111 11 1111
Q ss_pred HHHHHHHHHHHHhh-cccCCC-----cchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcc-ccchHHHHHHHHHHHH
Q 018650 153 ASVIVLVFILIFHF-APRCGN-----TNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQ-LLYPDTWFFMLVVAIC 225 (352)
Q Consensus 153 ~~~~~~~~~l~~~~-~~r~g~-----~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~-~~~~~~y~~l~~~v~~ 225 (352)
.. ..++...+.. .++..+ .....+...+.+.++.-..... .. .++... ...+..+.++.....+
T Consensus 150 l~--aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~ 220 (281)
T TIGR03340 150 LA--AALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLY-----LK--RHGRSMFPYARQILPSATLGGLM 220 (281)
T ss_pred HH--HHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHH-----HH--HhccchhhhHHHHHHHHHHHHHH
Confidence 11 1111111222 222211 1111122222222211111000 00 011111 1112223333333333
Q ss_pred HHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 018650 226 VIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 293 (352)
Q Consensus 226 ~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lL 293 (352)
......+.++++++.+++.+.+..|. .++++++.|.++++|..+. ....|.++++.|++++
T Consensus 221 s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~~------~~~iG~~lil~Gv~l~ 281 (281)
T TIGR03340 221 IGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWYL------TRLMGVCIIVAGLVVL 281 (281)
T ss_pred HHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCccH------HHHHHHHHHHHhHHhC
Confidence 34444678899999999999999887 4889999999999997653 5667888899998764
No 4
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=99.21 E-value=6.6e-11 Score=100.90 Aligned_cols=116 Identities=18% Similarity=0.184 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccch--hHHHHHHHHHHHHHHHHHHHhhchhHHHhhhh
Q 018650 9 KGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEP--LWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG 86 (352)
Q Consensus 9 iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p--~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~ 86 (352)
+|.++.+.+.++.+.|+++.|+|.++.++.+.............+| +-+.|++++++++.++..++...|++...|+.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~ 81 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPLL 81 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 4778899999999999999999988765321110000011235567 78899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH--HhcCcCCccchhhHHHHhhhhheee
Q 018650 87 ALSIIVSAVLAHF--ILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 87 a~~lv~~~~la~~--~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
++.+++..+.+.. ++||+++..+++|++++++|+.++.
T Consensus 82 sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 82 SLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999888888886 7999999999999999999999874
No 5
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.17 E-value=9.8e-09 Score=98.77 Aligned_cols=262 Identities=17% Similarity=0.258 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc---CCcccccc---cch---hHHHHHHHHHHHHHHHHHHHhh-chh
Q 018650 12 VLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA---GVGGFTYL---LEP---LWWVGMAIMIVGEVANFVAYAF-APA 79 (352)
Q Consensus 12 ~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~~---~~~~~~~l---~~p---~W~~G~~l~~~g~~~~~~Al~~-ap~ 79 (352)
++++.++++-+.....-|.+..+.+... ..|- ..-...+. +++ ....|+........+.+.++.. .|.
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a 86 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA 86 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 4567778888888888887654321110 1110 00000011 111 1112332222333455667766 588
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHH-HH
Q 018650 80 VLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFLLYVASVI-VL 158 (352)
Q Consensus 80 slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~-~~ 158 (352)
+...-+.....+++.+++++++|||+++++++|+++.++|+.++.. +..+.. +. .. .+- .+..... ..
T Consensus 87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~--~~~~~~-~~-~~------~G~-~l~l~aal~~ 155 (299)
T PRK11453 87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE--DSLNGQ-HV-AM------LGF-MLTLAAAFSW 155 (299)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc--ccCCCc-ch-hH------HHH-HHHHHHHHHH
Confidence 8888888999999999999999999999999999999999887752 211111 10 00 111 1111111 11
Q ss_pred HH-HHHHh-hcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCc------cccchHHH-HHHHHHHHHHHHH
Q 018650 159 VF-ILIFH-FAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKN------QLLYPDTW-FFMLVVAICVIMQ 229 (352)
Q Consensus 159 ~~-~l~~~-~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~------~~~~~~~y-~~l~~~v~~~l~Q 229 (352)
.+ .+..+ ..++.+......+.....++++.-... .+. . .++.+ ...++..| .++..++.+...+
T Consensus 156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~ 228 (299)
T PRK11453 156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFV---ASL-I---LDGSATMIHSLVTIDMTTILSLMYLAFVATIVG 228 (299)
T ss_pred HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHH---HHH-H---hcCchhhhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 11 11111 111111111222222112222211110 000 0 11111 11233333 3344455667777
Q ss_pred HHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650 230 MNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD 298 (352)
Q Consensus 230 ~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~ 298 (352)
....++++++.++..+.++. ...++++++.|++++||..+. ...+|.+++++|+++....+.
T Consensus 229 ~~l~~~~l~~~~a~~~s~~~-~l~Pv~a~~~~~l~lgE~~~~------~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 229 YGIWGTLLGRYETWRVAPLS-LLVPVVGLASAALLLDERLTG------LQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHhCCHHHHHHHH-HHHHHHHHHHHHHHhCCCccH------HHHHHHHHHHHHHHHHhcchh
Confidence 78889999999998888765 578999999999999996553 457888889999987765544
No 6
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.12 E-value=2.2e-08 Score=96.25 Aligned_cols=249 Identities=12% Similarity=0.111 Sum_probs=144.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--Ccc---------------cC-CcccccccchhH----HHHHH
Q 018650 4 SKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVR---------------AG-VGGFTYLLEPLW----WVGMA 61 (352)
Q Consensus 4 ~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~---------------~~-~~~~~~l~~p~W----~~G~~ 61 (352)
|+++..|.+++++++++.+...+.-|.. .+.+... -.| .+ ...++..+++++ ..|..
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV 81 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence 4577899999999999999998888753 1110000 000 00 000001122332 25556
Q ss_pred HHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHH
Q 018650 62 IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWS 141 (352)
Q Consensus 62 l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~ 141 (352)
...+...+.+.++...|.+...-+.....++.++++.+++|||+++++|.|+++.++|++++. .|.+ +. .+.
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~--~~~~-~~----~~~- 153 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL--WTFG-SL----PII- 153 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH--HHcC-Cc----cHH-
Confidence 667788899999999999999999999999999999999999999999999999999998764 2211 10 010
Q ss_pred HhcChhHHHHHHHHHHHHHHHHHh-hcccCCCcc-h-HHHHHH-HHhhhhHHHHHHHHHHHHHHHhhcCCccc-c-chHH
Q 018650 142 LATQPAFLLYVASVIVLVFILIFH-FAPRCGNTN-A-LVFIGI-CSLMGSLSVMSVKALGTSLKLTFEGKNQL-L-YPDT 215 (352)
Q Consensus 142 ~~~~p~fl~y~~~~~~~~~~l~~~-~~~r~g~~~-~-~~~~~i-~gllg~~tvl~~K~v~~~l~~~~~g~~~~-~-~~~~ 215 (352)
. ....++...+. ..+|...++ . ...... ...++.... +.....+.... . .+..
T Consensus 154 ----------~--l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 212 (296)
T PRK15430 154 ----------A--LGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL---------FAIADSSTSHMGQNPMSL 212 (296)
T ss_pred ----------H--HHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH---------HHHccCCcccccCCcHHH
Confidence 0 00111111111 122322111 1 111110 001111000 00001111111 1 1222
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650 216 WFFM-LVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT 290 (352)
Q Consensus 216 y~~l-~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv 290 (352)
+..+ ..++.+.+.| .+.|+++++.+++.+.++.|. .++++++.|+++++|..+ + ....|.++++.|+
T Consensus 213 ~~~~~~~g~~t~i~~-~~~~~a~~~~~a~~~s~~~~l-~Pv~a~~~g~l~l~E~~~--~----~~~~G~~lI~~~~ 280 (296)
T PRK15430 213 NLLLIAAGIVTTVPL-LCFTAAATRLRLSTLGFFQYI-GPTLMFLLAVTFYGEKPG--A----DKMVTFAFIWVAL 280 (296)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHH-HHHHHHHHHHHHHcCCCC--H----HHHHHHHHHHHHH
Confidence 2222 2334455665 688999999999988888776 778999999999999755 3 3344444554444
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.05 E-value=4.6e-08 Score=91.23 Aligned_cols=205 Identities=16% Similarity=0.182 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018650 57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV 136 (352)
Q Consensus 57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~ 136 (352)
..|.+...+...+.+.|+.+.|.+...++..+..+++.+++..++|||+++++++|+.++++|+.++...+ +.+. +
T Consensus 51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~-~- 126 (260)
T TIGR00950 51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSI-N- 126 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccc-c-
Confidence 55666667888899999999999999999999999999999999999999999999999999998875322 1111 1
Q ss_pred HHHHHHhcChhHHHHHHHHHHH-HH-HHHHhhcc-cCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccch
Q 018650 137 QEIWSLATQPAFLLYVASVIVL-VF-ILIFHFAP-RCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYP 213 (352)
Q Consensus 137 ~el~~~~~~p~fl~y~~~~~~~-~~-~l~~~~~~-r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~ 213 (352)
. .+.+ +.....+. .+ ....+... +.+......+. .....++.-.. .- ....+.....++
T Consensus 127 --~------~G~~-~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~-------~~~~~~~~~~~~ 188 (260)
T TIGR00950 127 --P------AGLL-LGLGSGISFALGTVLYKRLVKKEGPELLQFTG-WVLLLGALLLL-PF-------AWFLGPNPQALS 188 (260)
T ss_pred --H------HHHH-HHHHHHHHHHHHHHHHhHHhhcCCchHHHHHH-HHHHHHHHHHH-HH-------HHhcCCCCCcch
Confidence 0 1111 11111111 11 11111111 12211112221 11112211111 10 011221212234
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650 214 DTWF-FMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT 290 (352)
Q Consensus 214 ~~y~-~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv 290 (352)
..|. ++...+.+........++++++.+++.+..+.+ ..++++++.+.++++|..+ + ....|.++++.|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E~~~--~----~~~~G~~li~~g~ 259 (260)
T TIGR00950 189 LQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL-AEPLVALLLGLLILGETLS--L----PQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHHhc
Confidence 4443 233344443444466789999999988888876 5788999999999999544 4 3456666666664
No 8
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.03 E-value=1.3e-07 Score=92.80 Aligned_cols=231 Identities=15% Similarity=0.249 Sum_probs=130.6
Q ss_pred ccccchhHHHHH--HHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeee
Q 018650 49 TYLLEPLWWVGM--AIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH 126 (352)
Q Consensus 49 ~~l~~p~W~~G~--~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~ 126 (352)
+.+++|+|.-=+ ++++.|......||.+-+++-+|=+.+.+++++++++.++||||.++.+++|+.+|++|+++++..
T Consensus 73 ~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s 152 (334)
T PF06027_consen 73 KVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS 152 (334)
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence 345566554322 344678888899999999999999999999999999999999999999999999999998887654
Q ss_pred cCCCCCC--CCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhh-cc-cCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 018650 127 APQESPI--TSVQEIWSLATQPAFLLYVASVIVLVFILIFHF-AP-RCGNTNALVFIGICSLMGSLSVMSVKALGTSLKL 202 (352)
Q Consensus 127 ~p~~~~~--~t~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~-~~-r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~ 202 (352)
.-..++. ...+.+.. . .++ ....++..+.-. .+ ...+.+...+.+.-|++|.+-. ...... -+
T Consensus 153 D~~~~~~~~~~~~~i~G----D-ll~----l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~-~iq~~i---le 219 (334)
T PF06027_consen 153 DVLSGSDSSSGSNPILG----D-LLA----LLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIIS-GIQLAI---LE 219 (334)
T ss_pred cccccccCCCCCccchh----H-HHH----HHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHH-HHHHHh---ee
Confidence 3211111 01111111 0 111 111111111111 11 1112223344444444443211 111111 00
Q ss_pred hhcCCccc-cchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Q 018650 203 TFEGKNQL-LYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEIC 281 (352)
Q Consensus 203 ~~~g~~~~-~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~ 281 (352)
.++...+ .++.....++....+...=-...+-.++..+|+.+.--. ..-...+++.++.+|++..+ + ....
T Consensus 220 -~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL-LTsd~~ali~~i~~f~~~~~--~----ly~~ 291 (334)
T PF06027_consen 220 -RSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSL-LTSDFYALIIDIFFFGYKFS--W----LYIL 291 (334)
T ss_pred -hhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHH-HHhhHHHHHHHHHhcCcccc--H----HHHH
Confidence 1111111 133333333333333332222345567778776444332 33446689999999999543 3 5778
Q ss_pred HHHHHHHHHhhhccCCCCC
Q 018650 282 GFVVVLSGTILLHTTKDFE 300 (352)
Q Consensus 282 G~~lii~Gv~lLs~~~~~~ 300 (352)
|+++++.|.++-...+.++
T Consensus 292 af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 292 AFALIIIGFVVYNLAESPE 310 (334)
T ss_pred HHHHHHHHhheEEccCCcc
Confidence 9999999998887665433
No 9
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.03 E-value=9.9e-08 Score=94.60 Aligned_cols=217 Identities=10% Similarity=0.178 Sum_probs=120.2
Q ss_pred HHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHH------hcCcCCccchhhHHHHhhhhheeeeec-CCCCC-----CC
Q 018650 67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFI------LHEKLPQLGILGCVMCIAGSIIIVIHA-PQESP-----IT 134 (352)
Q Consensus 67 ~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~------L~E~~~~~~~~G~~li~~G~~~~v~~~-p~~~~-----~~ 134 (352)
..+.+.++.+.|.+...=+.....++++++++++ +|||+++++++|++++++|+.++.... +.... ..
T Consensus 92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~ 171 (358)
T PLN00411 92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYL 171 (358)
T ss_pred HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccc
Confidence 3467889999999999999999999999999999 699999999999999999998765322 21000 00
Q ss_pred CHHHHH--HHhcChhHHHHHHHHHHH-HHHHHH-----hhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcC
Q 018650 135 SVQEIW--SLATQPAFLLYVASVIVL-VFILIF-----HFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEG 206 (352)
Q Consensus 135 t~~el~--~~~~~p~fl~y~~~~~~~-~~~l~~-----~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g 206 (352)
+..+.. ....+...+.-..+.+.. ++.-.+ +..++++.. ..+....+++++...... +. + .++
T Consensus 172 ~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~--~~~t~~~~~~~~~~~~~~---~l-~---~~~ 242 (358)
T PLN00411 172 NFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAA--FTVSFLYTVCVSIVTSMI---GL-V---VEK 242 (358)
T ss_pred cccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH--hHHHHHHHHHHHHHHHHH---HH-H---Hcc
Confidence 000000 000000011111111111 111111 111222221 122222222222221111 00 1 111
Q ss_pred C--cc-ccc--hHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Q 018650 207 K--NQ-LLY--PDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEIC 281 (352)
Q Consensus 207 ~--~~-~~~--~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~ 281 (352)
. .. ..+ +..+.++..++.+.+ -..+.|+++++-+++.+.... -..++++++.|+++++|..+. ..++
T Consensus 243 ~~~~~~~~~~~~~~~~i~y~~i~t~l-ay~lw~~~v~~~ga~~as~~~-~L~PV~a~llg~l~LgE~lt~------~~~i 314 (358)
T PLN00411 243 NNPSVWIIHFDITLITIVTMAIITSV-YYVIHSWTVRHKGPLYLAIFK-PLSILIAVVMGAIFLNDSLYL------GCLI 314 (358)
T ss_pred CCcccceeccchHHHHHHHHHHHHHH-HHHHHHHHHhccCchHHHHHH-hHHHHHHHHHHHHHhCCCCcH------HHHH
Confidence 1 11 111 122222222233333 335689999999988665554 457899999999999996553 5668
Q ss_pred HHHHHHHHHhhhccCCCCC
Q 018650 282 GFVVVLSGTILLHTTKDFE 300 (352)
Q Consensus 282 G~~lii~Gv~lLs~~~~~~ 300 (352)
|.++++.|+++..+.+.+|
T Consensus 315 G~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 315 GGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHHHHhhhhhh
Confidence 8899999998887766555
No 10
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.95 E-value=5.5e-07 Score=86.54 Aligned_cols=260 Identities=13% Similarity=0.140 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--CcccCC--------cccccccc---hhHHHHHHHHHHHHHHHHHHHhh
Q 018650 10 GFVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRAGV--------GGFTYLLE---PLWWVGMAIMIVGEVANFVAYAF 76 (352)
Q Consensus 10 Gv~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~~~~--------~~~~~l~~---p~W~~G~~l~~~g~~~~~~Al~~ 76 (352)
+.++++.++++-+..+...|.+....+... ..|-.- ..++-.++ +....|.+.+.....+.+.++.+
T Consensus 5 ~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~ 84 (295)
T PRK11689 5 ATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGY 84 (295)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 455677777777777777776554321110 001000 00011111 12233333333444455555544
Q ss_pred ----chhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHh-cCh-hHHH
Q 018650 77 ----APAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLA-TQP-AFLL 150 (352)
Q Consensus 77 ----ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~-~~p-~fl~ 150 (352)
.|.+...-+..+..++..++++.++|||+++++|.|+++..+|++++....+ + .+.++.+... .++ +.+
T Consensus 85 ~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~--~--~~~~~~~~~~~~~~~G~~- 159 (295)
T PRK11689 85 ANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDN--G--LSLAELINNIASNPLSYG- 159 (295)
T ss_pred hhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCc--c--chhhhhhhccccChHHHH-
Confidence 3555666778889999999999999999999999999999999988763221 1 0111110000 001 111
Q ss_pred HHHHHHHHHHHHHH-hhcccCCC-cchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcC-CccccchHHHHHHHH-HHHHH
Q 018650 151 YVASVIVLVFILIF-HFAPRCGN-TNALVFIGICSLMGSLSVMSVKALGTSLKLTFEG-KNQLLYPDTWFFMLV-VAICV 226 (352)
Q Consensus 151 y~~~~~~~~~~l~~-~~~~r~g~-~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g-~~~~~~~~~y~~l~~-~v~~~ 226 (352)
+ ......+...+ ...+|..+ .+...+... .++.... . .. ..++ ...-.++..|..+.. .+.+.
T Consensus 160 ~--~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~---~~~~~l~-~---~~----~~~~~~~~~~~~~~~~~l~~~~~~t~ 226 (295)
T PRK11689 160 L--AFIGAFIWAAYCNVTRKYARGKNGITLFFI---LTALALW-I---KY----FLSPQPAMVFSLPAIIKLLLAAAAMG 226 (295)
T ss_pred H--HHHHHHHHHHHHHHHhhccCCCCchhHHHH---HHHHHHH-H---HH----HHhcCccccCCHHHHHHHHHHHHHHH
Confidence 1 11111111111 12233221 122221111 1111111 0 00 0111 111123444433322 23344
Q ss_pred HHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhcc
Q 018650 227 IMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHT 295 (352)
Q Consensus 227 l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~ 295 (352)
+.+ .+.|+++++.+++.+.+..|. .++++++.|+++++|..+. ...+|.++++.|+++...
T Consensus 227 ~~~-~l~~~al~~~~a~~~s~~~~l-~Pv~a~i~~~~~lgE~~~~------~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 227 FGY-AAWNVGILHGNMTLLATASYF-TPVLSAALAALLLSTPLSF------SFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHH-HHHHHHHHccCHHHHHHHHHh-HHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHhHHHHhh
Confidence 444 667999999999877777655 7899999999999996553 566788888888866543
No 11
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.90 E-value=2.8e-07 Score=88.38 Aligned_cols=211 Identities=11% Similarity=0.073 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHH-hhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018650 58 VGMAIMIVGEVANFVAY-AFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV 136 (352)
Q Consensus 58 ~G~~l~~~g~~~~~~Al-~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~ 136 (352)
.|......+..+.+.+. ...|.+...-+..+..++..+++++ +|||+++++|.|.++.++|+.++.. +++.+....
T Consensus 74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~--~~~~~~~~~ 150 (292)
T PRK11272 74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS--GGNLSGNPW 150 (292)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc--CcccccchH
Confidence 45554455566677777 8889899999999999999999975 7999999999999999999887642 211111011
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHH-hhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcC-CccccchH
Q 018650 137 QEIWSLATQPAFLLYVASVIVLVFILIF-HFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEG-KNQLLYPD 214 (352)
Q Consensus 137 ~el~~~~~~p~fl~y~~~~~~~~~~l~~-~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g-~~~~~~~~ 214 (352)
.+ + +... ...+...+ ...+|..+++..........+++...... .. . .++ .....++.
T Consensus 151 G~----------l-~~l~--a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~---~~~~~~~~~~~~ 210 (292)
T PRK11272 151 GA----------I-LILI--ASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIA---SL-L---SGERLTALPTLS 210 (292)
T ss_pred HH----------H-HHHH--HHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHH---HH-H---cCCcccccCCHH
Confidence 11 1 1111 11111111 12333332221111111111222111100 00 0 111 11222344
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 018650 215 TWFF-MLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 293 (352)
Q Consensus 215 ~y~~-l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lL 293 (352)
.|.. +...+.+........++++++.+++.+..+. ...++++++.|.++++|..+ + ....|.++++.|++++
T Consensus 211 ~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~-~l~Pi~a~i~~~~~l~E~~t--~----~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 211 GFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYA-YVNPVVAVLLGTGLGGETLS--P----IEWLALGVIVFAVVLV 283 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHHHHHHHcCCCCc--H----HHHHHHHHHHHHHHHH
Confidence 4433 3334444555567789999999988777765 45889999999999999644 3 4678888999999888
Q ss_pred ccCCC
Q 018650 294 HTTKD 298 (352)
Q Consensus 294 s~~~~ 298 (352)
+..+.
T Consensus 284 ~~~~~ 288 (292)
T PRK11272 284 TLGKY 288 (292)
T ss_pred HHHHh
Confidence 76443
No 12
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.89 E-value=1.4e-06 Score=83.61 Aligned_cols=257 Identities=13% Similarity=0.109 Sum_probs=144.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc--CC--------cccccccchhH----HHHHHHHHHHHHH
Q 018650 6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA--GV--------GGFTYLLEPLW----WVGMAIMIVGEVA 69 (352)
Q Consensus 6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~~--~~--------~~~~~l~~p~W----~~G~~l~~~g~~~ 69 (352)
+...|+.+.+++.++.+.+.++-|.+....+... ..|- +. ..+.-.++..| +.|.. +.....+
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~ 87 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL 87 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence 4567899999999999999999998765422110 0000 00 00001122222 55553 4566677
Q ss_pred HHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChhHH
Q 018650 70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPAFL 149 (352)
Q Consensus 70 ~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~fl 149 (352)
.+.++...|.+...-+.....++..++++ |+.+ ++.+..+.++|+.++...+.+.+. .+ .+ +.+
T Consensus 88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li~~~~~~~~~-~~---~~------G~l 151 (293)
T PRK10532 88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFLLPLGQDVSH-VD---LT------GAA 151 (293)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHheeeecCCCccc-CC---hH------HHH
Confidence 88899999999888888888888877763 5543 456777888898876532221111 11 10 111
Q ss_pred HHHHHHHHHHHHHHHh-hcccCCCc-chHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHH-HHHHHHHH
Q 018650 150 LYVASVIVLVFILIFH-FAPRCGNT-NALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFF-MLVVAICV 226 (352)
Q Consensus 150 ~y~~~~~~~~~~l~~~-~~~r~g~~-~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~-l~~~v~~~ 226 (352)
.-+. ..++...+. ..++..++ ..... ....++++.-.. . +. . ..+.....++..|.. +..++.+.
T Consensus 152 l~l~---aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~-~--~~--~---~~~~~~~~~~~~~~~~l~lgv~~t 219 (293)
T PRK10532 152 LALG---AGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFV-P--IG--A---LQAGEALWHWSILPLGLAVAILST 219 (293)
T ss_pred HHHH---HHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHH-H--HH--H---HccCcccCCHHHHHHHHHHHHHHH
Confidence 1111 111111111 11222111 11111 222222221111 0 00 0 111112234444432 34556677
Q ss_pred HHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650 227 IMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD 298 (352)
Q Consensus 227 l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~ 298 (352)
..+....|+++++.+++.+.++.+ ..++++++.|+++|||..+ + ...+|.+++++|++...+.+.
T Consensus 220 ~~~~~l~~~~~~~~~a~~as~~~~-l~Pv~a~l~~~l~lgE~~~--~----~~~iG~~lIl~~~~~~~~~~~ 284 (293)
T PRK10532 220 ALPYSLEMIALTRLPTRTFGTLMS-MEPALAAVSGMIFLGETLT--L----IQWLALGAIIAASMGSTLTIR 284 (293)
T ss_pred HHHHHHHHHHHHhcChhHHHHHHH-hHHHHHHHHHHHHhCCCCc--H----HHHHHHHHHHHHHHHHHhcCC
Confidence 777788899999999987777765 5889999999999999755 3 456777888888887765543
No 13
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.87 E-value=1.7e-08 Score=83.86 Aligned_cols=103 Identities=17% Similarity=0.275 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHH--HHHHHHHHHHHHHHhhchhHHHhhhhhHH
Q 018650 12 VLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGM--AIMIVGEVANFVAYAFAPAVLVTPLGALS 89 (352)
Q Consensus 12 ~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~--~l~~~g~~~~~~Al~~ap~slv~Pl~a~~ 89 (352)
+.-+++.++...|++..|++.+..+.. + + ..++.++.+. ..+.++..++..++...|+++.+|+.+++
T Consensus 4 ~~l~~ai~~ev~g~~~lK~s~~~~~~~---~------~-~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~ 73 (111)
T PRK15051 4 LTLVFASLLSVAGQLCQKQATRPVAIG---K------R-RKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLN 73 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcc---h------h-hhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHH
Confidence 345566778888999999974332111 0 0 1123445554 66778999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 90 IIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 90 lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
++++.+++.+++|||++.++++|+++++.|++++.
T Consensus 74 ~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 74 FVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998764
No 14
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.83 E-value=6.2e-07 Score=86.17 Aligned_cols=223 Identities=16% Similarity=0.130 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCH
Q 018650 57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV 136 (352)
Q Consensus 57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~ 136 (352)
..|+. +++...++..++.+.+.+..+=+.++..+++++++++++|||++++++.|.+++++|+.+.. ..+.+. +.
T Consensus 70 ~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~---~~~~~~-~~ 144 (302)
T TIGR00817 70 PVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS---DTELSF-NW 144 (302)
T ss_pred HHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc---CCcccc-cH
Confidence 45555 46777899999999999999999999999999999999999999999999999999997642 222111 11
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHH-H-hhcc--cCCCcchHHHHHHHHhhhhHHHHH-HHHHHHHHHHhhcCCcccc
Q 018650 137 QEIWSLATQPAFLLYVASVIVLVFILI-F-HFAP--RCGNTNALVFIGICSLMGSLSVMS-VKALGTSLKLTFEGKNQLL 211 (352)
Q Consensus 137 ~el~~~~~~p~fl~y~~~~~~~~~~l~-~-~~~~--r~g~~~~~~~~~i~gllg~~tvl~-~K~v~~~l~~~~~g~~~~~ 211 (352)
.+.+.-....+...+-.+ . +..+ +.+..+...|....+.+.-.-... ............+......
T Consensus 145 ---------~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
T TIGR00817 145 ---------AGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVN 215 (302)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccC
Confidence 111111111111011000 1 1111 222333444444333221111100 0000000000000000001
Q ss_pred chHHHHHH-HHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650 212 YPDTWFFM-LVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT 290 (352)
Q Consensus 212 ~~~~y~~l-~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv 290 (352)
....|... .....+........+.++++.+++...-. ....++++++.|.++++|..+ + ...+|.++++.|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~-~~l~pv~~~~~~~~~lge~lt--~----~~~~G~~lil~Gv 288 (302)
T TIGR00817 216 VTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVG-NCMKRVVVIVVSILFFGTKIS--P----QQVFGTGIAIAGV 288 (302)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHH-hhhhhhheeeeehhhcCCCCc--h----hHHHHHHHHHHHH
Confidence 11123211 22222222222233468888887765555 667888999999999999654 3 4667888899999
Q ss_pred hhhccCCCCC
Q 018650 291 ILLHTTKDFE 300 (352)
Q Consensus 291 ~lLs~~~~~~ 300 (352)
++-++.|.++
T Consensus 289 ~l~~~~k~~~ 298 (302)
T TIGR00817 289 FLYSRVKAQK 298 (302)
T ss_pred HHHHHHhccC
Confidence 9988776544
No 15
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.82 E-value=8.5e-07 Score=85.33 Aligned_cols=222 Identities=9% Similarity=0.154 Sum_probs=138.3
Q ss_pred chhHHHHHHH---HHHHHHHHHHHHhhchhHHHhhhhh-HHHHHHHHHHHHHhcCcCCccc----hhhHHHHhhhhheee
Q 018650 53 EPLWWVGMAI---MIVGEVANFVAYAFAPAVLVTPLGA-LSIIVSAVLAHFILHEKLPQLG----ILGCVMCIAGSIIIV 124 (352)
Q Consensus 53 ~p~W~~G~~l---~~~g~~~~~~Al~~ap~slv~Pl~a-~~lv~~~~la~~~L~E~~~~~~----~~G~~li~~G~~~~v 124 (352)
...|..|++. ...|.+..+.|.....+++-.|+.. +.++++.+.+.+++||+.++++ ++|++++++|+.++.
T Consensus 56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~ 135 (290)
T TIGR00776 56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS 135 (290)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence 3455657776 8899999999999999999999999 9999999999999999999999 999999999988875
Q ss_pred eecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhhccc---CCCcchHHHHHHHHh-hhhHHHHHHHHHHHHH
Q 018650 125 IHAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPR---CGNTNALVFIGICSL-MGSLSVMSVKALGTSL 200 (352)
Q Consensus 125 ~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~~~r---~g~~~~~~~~~i~gl-lg~~tvl~~K~v~~~l 200 (352)
...+++.+. ++... .+.-+.+..+.. +....+...+| ++.... .+....+. +++...... -.
T Consensus 136 ~~~~~~~~~---~~~~~---~~~Gi~~~l~sg--~~y~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~-~~---- 201 (290)
T TIGR00776 136 RSKDKSAGI---KSEFN---FKKGILLLLMST--IGYLVYVVVAKAFGVDGLSV-LLPQAIGMVIGGIIFNLG-HI---- 201 (290)
T ss_pred ecccccccc---ccccc---hhhHHHHHHHHH--HHHHHHHHHHHHcCCCccee-hhHHHHHHHHHHHHHHHH-Hh----
Confidence 443222110 00000 011222222221 11111222222 222221 11122222 333322211 10
Q ss_pred HHhhcCCccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH
Q 018650 201 KLTFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI 280 (352)
Q Consensus 201 ~~~~~g~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~ 280 (352)
+ . ..+.....|..+..++.. ..+..+...++++.......++.....++.+++.|+.+|+|.. ++.++....
T Consensus 202 ~---~--~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~--~~~~~~~~~ 273 (290)
T TIGR00776 202 L---A--KPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKK--TKREMIAIS 273 (290)
T ss_pred c---c--cchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCC--CcceeehhH
Confidence 0 0 112222334333344444 5555666778884444455566666679999999999999965 478888999
Q ss_pred HHHHHHHHHHhhhccC
Q 018650 281 CGFVVVLSGTILLHTT 296 (352)
Q Consensus 281 ~G~~lii~Gv~lLs~~ 296 (352)
+|+++++.|+++.+-.
T Consensus 274 iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 274 VGIILIIIAANILGIG 289 (290)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999988654
No 16
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.82 E-value=4.9e-06 Score=77.71 Aligned_cols=212 Identities=17% Similarity=0.280 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHH-HHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCC
Q 018650 57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAH-FILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITS 135 (352)
Q Consensus 57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~-~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t 135 (352)
..|......+..+.+.++...|.+..+++.....++..+++. +++|||+++++|.|..+...|+.++......+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~-- 151 (292)
T COG0697 74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL-- 151 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH--
Confidence 345555667888999999999999999999999999999997 77799999999999999999998876333222111
Q ss_pred HHHHHHHhcChhHHHHHHHHHHHHHHHHHhhcccCCCcchHHHHH-HHHhhhhHHHHHHHHHHHHHHHhhcCCccccchH
Q 018650 136 VQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIG-ICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPD 214 (352)
Q Consensus 136 ~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~~~r~g~~~~~~~~~-i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~ 214 (352)
.. .+ ..+....... ..+.....++..+........ .+.. +..... ........+....+.
T Consensus 152 --~~------~g-~~~~l~a~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~ 212 (292)
T COG0697 152 --SL------LG-LLLALAAALL-WALYTALVKRLSRLGPVTLALLLQLL-LALLLL--------LLFFLSGFGAPILSR 212 (292)
T ss_pred --HH------HH-HHHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHHH-HHHHHH--------HHHHhccccccCCHH
Confidence 00 11 1111111111 011111122211111111111 1111 000000 000111112122333
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 018650 215 TWFFM-LVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 293 (352)
Q Consensus 215 ~y~~l-~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lL 293 (352)
.|..+ ..++.+......+.+++++..+++.+.++. ...++.+++.+.++++|..+. ....|.++++.|+++.
T Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~~~------~~~~G~~li~~g~~l~ 285 (292)
T COG0697 213 AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLS-LLEPVFAALLGVLLLGEPLSP------AQLLGAALVVLGVLLA 285 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHH
Confidence 33322 233333333447788999999999888887 456677888999999997653 4556778888898887
Q ss_pred ccC
Q 018650 294 HTT 296 (352)
Q Consensus 294 s~~ 296 (352)
...
T Consensus 286 ~~~ 288 (292)
T COG0697 286 SLR 288 (292)
T ss_pred hcc
Confidence 765
No 17
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.56 E-value=2.9e-07 Score=77.70 Aligned_cols=113 Identities=26% Similarity=0.351 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhhhc--Cccc--------------CC-cccccccchhH----HHHHHHHHHHHHH
Q 018650 11 FVLALLSSFFIGSSFIIKKKGLRRAAAAS--GVRA--------------GV-GGFTYLLEPLW----WVGMAIMIVGEVA 69 (352)
Q Consensus 11 v~LAl~ss~~~a~g~vlqk~~~~~~~~~~--~~~~--------------~~-~~~~~l~~p~W----~~G~~l~~~g~~~ 69 (352)
.+.|+.|+++.++..++-|.|.+.....- -.|+ |. +...-...+.| ..| +.-+++..+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSG-la~glswl~ 83 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSG-LAGGLSWLL 83 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHH-HHHHHHHHH
Confidence 56789999999999999999977421110 0000 00 00000112222 234 444577889
Q ss_pred HHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 70 ~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
.|.|+.-+++|.|.|+-..++++..+++..+||||++..+|+|+.++++|++++.
T Consensus 84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999999999998764
No 18
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.49 E-value=3.2e-05 Score=76.42 Aligned_cols=59 Identities=12% Similarity=0.196 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 66 GEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 66 g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
+..+...++.+.+.+..+=+-+++.+++++++++++|||++++.+.+++++++|+.+..
T Consensus 127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 34556689999999999999999999999999999999999999999999999999865
No 19
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.42 E-value=2e-06 Score=71.08 Aligned_cols=66 Identities=29% Similarity=0.423 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeee
Q 018650 59 GMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI 125 (352)
Q Consensus 59 G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~ 125 (352)
|.+...++..+.+.|+.++| ..+.++.+++.+++.+++..++|||+++++|.|++++.+|++++..
T Consensus 41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW 106 (113)
T ss_pred HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence 44555578899999999999 5899999999999999999999999999999999999999998764
No 20
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.41 E-value=0.00013 Score=68.44 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 63 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 63 ~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
+..+..+.+.|+...|.+..+-+.....++.++++++++|||+++++|+|+++..+|++++.
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 55677899999999999999999999999999999999999999999999999999988764
No 21
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=98.39 E-value=3.5e-07 Score=76.05 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhhHHHhhhhcCc-ccCCcccccccchhHHHHHHHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHH
Q 018650 20 FIGSSFIIKKKGLRRAAAASGV-RAGVGGFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLA 97 (352)
Q Consensus 20 ~~a~g~vlqk~~~~~~~~~~~~-~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la 97 (352)
+-+...-+-|||.+..++.... +.-.+...+++||.+++++++...|++..+..++-+|+|+..|+. +++++++++.+
T Consensus 7 ~WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g 86 (113)
T PF10639_consen 7 LWGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTG 86 (113)
T ss_pred HhcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHH
Confidence 3344555677765543322111 001124568999999999999999999999999999999999995 99999999999
Q ss_pred HHHhcCcCCccchhhHHHHhhhhhee
Q 018650 98 HFILHEKLPQLGILGCVMCIAGSIII 123 (352)
Q Consensus 98 ~~~L~E~~~~~~~~G~~li~~G~~~~ 123 (352)
+++-+|..+++.++|+.+++.|+.+.
T Consensus 87 ~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 87 WLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCcccchhHHHHHHHHHcCeeee
Confidence 77777777888899999999998765
No 22
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.37 E-value=0.00014 Score=70.13 Aligned_cols=222 Identities=16% Similarity=0.268 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHH
Q 018650 60 MAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEI 139 (352)
Q Consensus 60 ~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el 139 (352)
-+++.++..++-.|+.+.|...-+=+-+..++.+++++.+++|+|.+++++++++++++|+.+......++.+..+.++.
T Consensus 71 ~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~ 150 (303)
T PF08449_consen 71 SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSF 150 (303)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccc
Confidence 35566788899999999999999999999999999999999999999999999999999999887665443332221110
Q ss_pred -HHHhcChhHHHHHHHHHHHHHHHHH--hhcccCCCc--chHHHHHHHHhhhhH-HHHHHHHHHHHHHHhhcCCccccch
Q 018650 140 -WSLATQPAFLLYVASVIVLVFILIF--HFAPRCGNT--NALVFIGICSLMGSL-SVMSVKALGTSLKLTFEGKNQLLYP 213 (352)
Q Consensus 140 -~~~~~~p~fl~y~~~~~~~~~~l~~--~~~~r~g~~--~~~~~~~i~gllg~~-tvl~~K~v~~~l~~~~~g~~~~~~~ 213 (352)
+.. +.++.....+.-...-.+ +..++++.. ..+.|-..-++.... .....+ -++ ..... .....||
T Consensus 151 ~~~~----G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~-~~~~~--~f~~~~p 222 (303)
T PF08449_consen 151 SSAL----GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGE-FRSAI--RFISAHP 222 (303)
T ss_pred cchh----HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhH-hhHHH--HHHHHhH
Confidence 000 111111100000001011 122333332 334555444432221 111101 011 11000 1123577
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhh
Q 018650 214 DTWFFMLVVAIC-VIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTIL 292 (352)
Q Consensus 214 ~~y~~l~~~v~~-~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~l 292 (352)
..+..++....+ .+.| .+.+.-.+++++....-+.. .=...+++.++++|++ +.++.++ .|.++++.|+.+
T Consensus 223 ~~~~~l~~~s~~~~~g~-~~i~~~~~~~~al~~t~v~t-~Rk~~sillS~~~f~~--~~~~~~~----~G~~lv~~g~~~ 294 (303)
T PF08449_consen 223 SVLLYLLLFSLTGALGQ-FFIFYLIKKFSALTTTIVTT-LRKFLSILLSVIIFGH--PLSPLQW----IGIVLVFAGIFL 294 (303)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHhcCchhhhhHHH-HHHHHHHHHHHHhcCC--cCChHHH----HHHHHhHHHHHH
Confidence 666655554444 4555 66677788888765544443 3457889999999997 4556555 555567777765
Q ss_pred hccCC
Q 018650 293 LHTTK 297 (352)
Q Consensus 293 Ls~~~ 297 (352)
=...+
T Consensus 295 ~~~~~ 299 (303)
T PF08449_consen 295 YSYAK 299 (303)
T ss_pred HHHhh
Confidence 44433
No 23
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.28 E-value=8.5e-05 Score=70.78 Aligned_cols=213 Identities=16% Similarity=0.279 Sum_probs=130.0
Q ss_pred hhHHHHHHH---HHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcCCccch----hhHHHHhhhhheeee
Q 018650 54 PLWWVGMAI---MIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQLGI----LGCVMCIAGSIIIVI 125 (352)
Q Consensus 54 p~W~~G~~l---~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~~~~~~----~G~~li~~G~~~~v~ 125 (352)
..|+.+++. -.+|.+.++.++.....|..-|+. +..++.|.+.+.++++|--+..++ .+.+++++|+.+...
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 456666643 358999999999999999999998 899999999999999999988887 588899999988765
Q ss_pred ecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHHHH---
Q 018650 126 HAPQESPITSVQEIWSLATQPAFLLYVASVIVLVFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSLKL--- 202 (352)
Q Consensus 126 ~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~--- 202 (352)
...++++.++..+..+ ..+ .. .+..+....|...||..+.+. .+.+.-++++..+-.
T Consensus 123 ~~~~~~~~~~~~~~~k-----gi~-~L--l~stigy~~Y~~~~~~~~~~~------------~~~~lPqaiGm~i~a~i~ 182 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKK-----GIL-AL--LISTIGYWIYSVIPKAFHVSG------------WSAFLPQAIGMLIGAFIF 182 (269)
T ss_pred ccccccccccccchhh-----HHH-HH--HHHHHHHHHHHHHHHhcCCCh------------hHhHHHHHHHHHHHHHHH
Confidence 5544443322222221 122 11 111222334555666544332 222222222221110
Q ss_pred -hhcCCccccchHHHHHHHHHHHHHHHHH-HHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH
Q 018650 203 -TFEGKNQLLYPDTWFFMLVVAICVIMQM-NYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI 280 (352)
Q Consensus 203 -~~~g~~~~~~~~~y~~l~~~v~~~l~Q~-~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~ 280 (352)
.+. ...+.+..+|.=+..++.-.+.-+ +++. -+.--.++.+|+-|.. .+.+.+.|..+|+|.. +..++....
T Consensus 183 ~~~~-~~~~~~k~~~~nil~G~~w~ignl~~~is--~~~~G~a~af~lSQ~~-vvIStlgGI~il~E~K--t~ke~~~~~ 256 (269)
T PF06800_consen 183 NLFS-KKPFFEKKSWKNILTGLIWGIGNLFYLIS--AQKNGVATAFTLSQLG-VVISTLGGIFILKEKK--TKKEMIYTL 256 (269)
T ss_pred hhcc-cccccccchHHhhHHHHHHHHHHHHHHHh--HHhccchhhhhHHhHH-HHHHHhhhheEEEecC--chhhHHHHH
Confidence 011 223333444443333333222211 2221 1123345567777776 5778899999999976 478889999
Q ss_pred HHHHHHHHHHhh
Q 018650 281 CGFVVVLSGTIL 292 (352)
Q Consensus 281 ~G~~lii~Gv~l 292 (352)
+|+++++.|.++
T Consensus 257 ~G~~Liv~G~il 268 (269)
T PF06800_consen 257 IGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHhhhc
Confidence 999999998875
No 24
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.18 E-value=1.1e-05 Score=77.59 Aligned_cols=127 Identities=17% Similarity=0.074 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc---cCC---------cccccccch-----hHHHHHHHHHHHHHH
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR---AGV---------GGFTYLLEP-----LWWVGMAIMIVGEVA 69 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~---~~~---------~~~~~l~~p-----~W~~G~~l~~~g~~~ 69 (352)
..+|.++++.++++++...++.||..++.+...-.. .+. .......++ .++.|++..+++..+
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l 225 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL 225 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999999999999998877533211100000 000 000011121 246677777788889
Q ss_pred HHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCC
Q 018650 70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPI 133 (352)
Q Consensus 70 ~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~ 133 (352)
+..++...|.+.+.++..+..+++.+++.+++||+++..+++|.++++.|+.......++|++.
T Consensus 226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~ 289 (293)
T PRK10532 226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKI 289 (293)
T ss_pred HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999988775555554443
No 25
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.14 E-value=4.5e-06 Score=78.65 Aligned_cols=266 Identities=20% Similarity=0.287 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-Cccc-CCc-----ccccccchh--------HH--HHHHHHHHHHHHH
Q 018650 8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-GVRA-GVG-----GFTYLLEPL--------WW--VGMAIMIVGEVAN 70 (352)
Q Consensus 8 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-~~~~-~~~-----~~~~l~~p~--------W~--~G~~l~~~g~~~~ 70 (352)
.+|++|..+| .+.+...++-++...-.+..- +.|- ..- ..-|.+.|- |+ -|+.- ..|..+.
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG-~tgvmlm 114 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMG-FTGVMLM 114 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhh-hhHHHHH
Confidence 3578888888 788888888777654333211 1110 000 012233332 22 22221 2566788
Q ss_pred HHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee----eecCCCCCCCCHHHHHHHhcCh
Q 018650 71 FVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV----IHAPQESPITSVQEIWSLATQP 146 (352)
Q Consensus 71 ~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v----~~~p~~~~~~t~~el~~~~~~p 146 (352)
+.||.+.|++-..=+...+.+++.++|+.+||||.++.|-+|+.+...|+++++ +|+.+++...+. + .-+..|
T Consensus 115 yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s-~--~~~~~~ 191 (346)
T KOG4510|consen 115 YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSS-Q--VEYDIP 191 (346)
T ss_pred HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccc-c--ccccCC
Confidence 999999999988888999999999999999999999999999999999999886 233222221111 1 122344
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCCCc-c---hHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccc-h-HHHHHHH
Q 018650 147 AFLLYVASVIVLVFILIFHFAPRCGNT-N---ALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLY-P-DTWFFML 220 (352)
Q Consensus 147 ~fl~y~~~~~~~~~~l~~~~~~r~g~~-~---~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~-~-~~y~~l~ 220 (352)
...+-...++....+ |...+..|++ | -+.|-+.-+++.++-..+ . -|.-|+.| + +-|+++.
T Consensus 192 gt~aai~s~lf~asv--yIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~--~---------ig~~~lP~cgkdr~l~~~ 258 (346)
T KOG4510|consen 192 GTVAAISSVLFGASV--YIILRYIGKNAHAIMSVSYFSLITLVVSLIGCA--S---------IGAVQLPHCGKDRWLFVN 258 (346)
T ss_pred chHHHHHhHhhhhhH--HHHHHHhhccccEEEEehHHHHHHHHHHHHHHh--h---------ccceecCccccceEEEEE
Confidence 433222222222222 1111222222 1 123333222222111110 0 11112222 2 2244555
Q ss_pred HHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 018650 221 VVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDF 299 (352)
Q Consensus 221 ~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~ 299 (352)
.++.+.+.| .++.+++|.=.|-.+. ++.+...+++.+--+++|+||.+ .| -.+|.+.++..++..+..|..
T Consensus 259 lGvfgfigQ-IllTm~lQiErAGpva-im~~~dvvfAf~wqv~ff~~~Pt--~w----s~~Ga~~vvsS~v~~a~~kwa 329 (346)
T KOG4510|consen 259 LGVFGFIGQ-ILLTMGLQIERAGPVA-IMTYTDVVFAFFWQVLFFGHWPT--IW----SWVGAVMVVSSTVWVALKKWA 329 (346)
T ss_pred ehhhhhHHH-HHHHHHhhhhccCCee-hhhHHHHHHHHHHHHHHhcCCCh--HH----HhhceeeeehhHHHHHHHHHh
Confidence 677777887 7899999977665443 44556678899999999999976 33 446666666666665555543
No 26
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.11 E-value=2.9e-05 Score=65.40 Aligned_cols=74 Identities=14% Similarity=0.199 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCC
Q 018650 56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129 (352)
Q Consensus 56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~ 129 (352)
|+..++++++++.+...|+...|+++.+|+- +++.+...+.+.+++||+++..+++|+.++++|++.+-..+++
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~ 107 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRK 107 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCC
Confidence 5677778889999999999999999999994 7999999999999999999999999999999999887544443
No 27
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=98.09 E-value=5.1e-05 Score=63.01 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhH-HHHHHHHHHHHHHHHHHHhhchhHHHhhh-hhHHHHHH
Q 018650 16 LSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLW-WVGMAIMIVGEVANFVAYAFAPAVLVTPL-GALSIIVS 93 (352)
Q Consensus 16 ~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W-~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~a~~lv~~ 93 (352)
++.++-..|....|++ + + +++|.| +..++++++++.+...|+...|+++.+|+ .+++.+.+
T Consensus 9 ~a~~~Ev~~~~~lK~s----~---g----------f~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~ 71 (110)
T PRK09541 9 GAILAEVIGTTLMKFS----E---G----------FTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLI 71 (110)
T ss_pred HHHHHHHHHHHHHHHh----c---C----------CCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH
Confidence 3455666666666654 1 0 234555 45556667888888999999999999999 67999999
Q ss_pred HHHHHHHhcCcCCccchhhHHHHhhhhheeeeec
Q 018650 94 AVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHA 127 (352)
Q Consensus 94 ~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~ 127 (352)
.+.+.+++||+++..+++|..++++|++++-..+
T Consensus 72 ~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 72 SLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999875444
No 28
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.08 E-value=0.00038 Score=68.68 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=86.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhh--------------------hhcCcccCCccccccc---chhHHHH
Q 018650 3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAA--------------------AASGVRAGVGGFTYLL---EPLWWVG 59 (352)
Q Consensus 3 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~--------------------~~~~~~~~~~~~~~l~---~p~W~~G 59 (352)
|+++..+|++..+++.++.+.=.+=+||. +.=+ ..-..+ ....+++ ...|..+
T Consensus 1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~---~f~~~~~~~~~~~~~~~ 76 (345)
T PRK13499 1 MSNAIILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLP---DFWAYYSSFSGSTLLPV 76 (345)
T ss_pred CCchhHHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHhcCHHHHHHH
Confidence 56788999999999999999988888882 2111 000011 1112222 2345555
Q ss_pred H---HHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcC---Cc----cchhhHHHHhhhhheeeeec
Q 018650 60 M---AIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKL---PQ----LGILGCVMCIAGSIIIVIHA 127 (352)
Q Consensus 60 ~---~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~---~~----~~~~G~~li~~G~~~~v~~~ 127 (352)
+ ++-.+|.+.++.+..+...|+-.|+. ++.++++.++...+++|=- +. ...+|++++++|+.+....+
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 5 34457999999999999999999996 6788999999999998643 33 34489999999999886644
No 29
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.96 E-value=0.00081 Score=63.40 Aligned_cols=71 Identities=17% Similarity=0.338 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecC
Q 018650 58 VGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAP 128 (352)
Q Consensus 58 ~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p 128 (352)
+=-++|.+...+.++++...+.+.-|=+...-++++++++.++||+|+++++|++..+.++|++++-....
T Consensus 22 vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 22 VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 34478899999999999999999999999999999999999999999999999999999999998765443
No 30
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.90 E-value=9.9e-05 Score=68.72 Aligned_cols=116 Identities=17% Similarity=0.196 Sum_probs=86.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-Ccc---c------------CCcccccccchhH----HHHHHHHH
Q 018650 5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-GVR---A------------GVGGFTYLLEPLW----WVGMAIMI 64 (352)
Q Consensus 5 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-~~~---~------------~~~~~~~l~~p~W----~~G~~l~~ 64 (352)
+....|..++++++++.+...++.|+..++.+... ... . ..+.........| +.|.+..+
T Consensus 124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (260)
T TIGR00950 124 SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTA 203 (260)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHH
Confidence 34568999999999999999999999754422100 000 0 0000011112223 24444556
Q ss_pred HHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhh
Q 018650 65 VGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGS 120 (352)
Q Consensus 65 ~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~ 120 (352)
++..+++.++...|.+.+..+..+..+++.+++.+++||+++..++.|+++++.|+
T Consensus 204 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 204 LAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 78889999999999999999999999999999999999999999999999999986
No 31
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.77 E-value=0.00015 Score=71.95 Aligned_cols=119 Identities=17% Similarity=0.208 Sum_probs=84.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-----------------cc-cCCcccccc--cchhHHHHHHH---
Q 018650 6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG-----------------VR-AGVGGFTYL--LEPLWWVGMAI--- 62 (352)
Q Consensus 6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~-----------------~~-~~~~~~~~l--~~p~W~~G~~l--- 62 (352)
++.+|.++++.|+++.+...++||+-.++-+.... .- .+....... .++ ++..++.
T Consensus 186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~i~y~~i 264 (358)
T PLN00411 186 DWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI-TLITIVTMAI 264 (358)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch-HHHHHHHHHH
Confidence 35779999999999999999999986544211100 00 000000000 011 1112221
Q ss_pred -HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeee
Q 018650 63 -MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI 125 (352)
Q Consensus 63 -~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~ 125 (352)
..++..+|..++...+.+.+..+.-+..+++++++..+|+|+++..+++|+++++.|+.+...
T Consensus 265 ~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 265 ITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 124667788889999999999999999999999999999999999999999999999988654
No 32
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.76 E-value=0.00049 Score=57.06 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHH-HHHHHHHHHHHhhchhHHHhhh
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIM-IVGEVANFVAYAFAPAVLVTPL 85 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~-~~g~~~~~~Al~~ap~slv~Pl 85 (352)
+...-+.-+++.++--.|....|++ + -+++|.|.+.++.. ++++.+--.|+...|.++..++
T Consensus 5 ~~~~~~~L~~Ai~~Ev~~t~~Lk~s----~-------------gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAv 67 (109)
T PRK10650 5 EWIHAAWLALAIVLEIVANIFLKFS----D-------------GFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYAL 67 (109)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh----c-------------CCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHH
Confidence 3444444455666666777666653 1 14466665555444 5677777888899999999998
Q ss_pred hh-HHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650 86 GA-LSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123 (352)
Q Consensus 86 ~a-~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~ 123 (352)
-+ ++.+...+.+.++.||+++..++.|..+++.|++.+
T Consensus 68 W~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 68 WGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 65 899999999999999999999999999999998864
No 33
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.74 E-value=0.00024 Score=57.09 Aligned_cols=85 Identities=16% Similarity=0.040 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHH-HHHHHHHHHHHHHhhchhHHHhhhh-hHHHHH
Q 018650 15 LLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMA-IMIVGEVANFVAYAFAPAVLVTPLG-ALSIIV 92 (352)
Q Consensus 15 l~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~-l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~ 92 (352)
+++.++...+....|++. -.+++.|..+.+ +++++..+...|+...|+++..|+- +++.+.
T Consensus 7 ~~a~~~ev~~~~~lK~s~-----------------g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~ 69 (93)
T PF00893_consen 7 LLAILFEVVGTIALKASH-----------------GFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVG 69 (93)
T ss_dssp HHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-----------------hhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 344455666777777621 133445555544 6678889999999999999999985 599999
Q ss_pred HHHHHHHHhcCcCCccchhhHHHH
Q 018650 93 SAVLAHFILHEKLPQLGILGCVMC 116 (352)
Q Consensus 93 ~~~la~~~L~E~~~~~~~~G~~li 116 (352)
..+.+.++.||+++..+++|+.++
T Consensus 70 ~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 70 VTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHHhheeeC
Confidence 999999999999999999999875
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.68 E-value=5.1e-05 Score=61.89 Aligned_cols=69 Identities=25% Similarity=0.396 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
...|.+...++..+...++...|.+.++++..+..+++.+++..++||+++++++.|+++++.|+.++.
T Consensus 57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345555557888999999999999999999999999999999999999999999999999999987653
No 35
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.66 E-value=0.00025 Score=68.12 Aligned_cols=116 Identities=20% Similarity=0.159 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCccc---C---------Ccccccccch-hH----HHHHHHHHHHHHH
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRA---G---------VGGFTYLLEP-LW----WVGMAIMIVGEVA 69 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~---~---------~~~~~~l~~p-~W----~~G~~l~~~g~~~ 69 (352)
...|.++++.++++.+.+.++.||-.++.+.. .... + .+....-.++ .| +.| +..+++..+
T Consensus 154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~t~~~~~l 231 (295)
T PRK11689 154 NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGI-TLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAA-AAMGFGYAA 231 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCCCCch-hHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHH-HHHHHHHHH
Confidence 35699999999999999999999843221100 0000 0 0000011112 22 222 233567788
Q ss_pred HHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 70 NFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 70 ~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
+..++...|.+.+.++..+..+++.+++..++||+++..+++|+++++.|+.+..
T Consensus 232 ~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 232 WNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 9999999999999999999999999999999999999999999999999987653
No 36
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.62 E-value=0.00034 Score=67.04 Aligned_cols=118 Identities=15% Similarity=0.129 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC---------------cccCCcccccccc-hhH----HHHHHHHHH
Q 018650 6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG---------------VRAGVGGFTYLLE-PLW----WVGMAIMIV 65 (352)
Q Consensus 6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~---------------~~~~~~~~~~l~~-p~W----~~G~~l~~~ 65 (352)
.+..|.++++.++++++.+.+..||..++.+.... ...+. ......+ ..| +.|+...++
T Consensus 147 ~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 147 GNPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGE-RLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCC-cccccCCHHHHHHHHHHHHHHHHH
Confidence 34679999999999999999998884322110000 00000 0001011 123 234445567
Q ss_pred HHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 66 GEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 66 g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
+..++..++...|.+.+..+..+..+++++++.+++||+++..+++|+++++.|+.+..
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999998764
No 37
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.49 E-value=0.0024 Score=52.99 Aligned_cols=80 Identities=15% Similarity=0.272 Sum_probs=60.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Q 018650 210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG 289 (352)
Q Consensus 210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~G 289 (352)
+.+|.........+.+...-..++..++++-|.++.+|+.+ .-.+.+.+.|..+|+|..+ + .-.+|..++++|
T Consensus 31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E~ls--~----~~~~Gi~lii~G 103 (111)
T PRK15051 31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHEPVS--P----RHWCGVAFIIGG 103 (111)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHHH
Confidence 34554333333444555556688899999999999999999 6668889999999999655 4 456788899999
Q ss_pred HhhhccC
Q 018650 290 TILLHTT 296 (352)
Q Consensus 290 v~lLs~~ 296 (352)
+++++++
T Consensus 104 v~~i~~~ 110 (111)
T PRK15051 104 IVILGST 110 (111)
T ss_pred HHHHhcc
Confidence 9998865
No 38
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.44 E-value=0.0019 Score=53.23 Aligned_cols=72 Identities=17% Similarity=0.072 Sum_probs=61.2
Q ss_pred cchhHHHHH-HHHHHHHHHHHHHHhhchhHHHhhhhh-HHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650 52 LEPLWWVGM-AIMIVGEVANFVAYAFAPAVLVTPLGA-LSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123 (352)
Q Consensus 52 ~~p~W~~G~-~l~~~g~~~~~~Al~~ap~slv~Pl~a-~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~ 123 (352)
+++.|++.+ +++.+++.+-..|+...|.++..++-+ ++.+.+.+.+.++.||+++..+++|+.+++.|++.+
T Consensus 27 ~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 27 SRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 355554444 455677778888899999999999866 999999999999999999999999999999999876
No 39
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.40 E-value=0.0013 Score=63.21 Aligned_cols=117 Identities=24% Similarity=0.295 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc--c-----C----------Ccccc------cccchh-H----HH
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR--A-----G----------VGGFT------YLLEPL-W----WV 58 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~--~-----~----------~~~~~------~l~~p~-W----~~ 58 (352)
...|.++++.++++.+...+++|+-.++.+...... . + .+... .-.++. | +.
T Consensus 141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 357999999999999999999998533211100000 0 0 00000 001122 2 23
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650 59 GMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123 (352)
Q Consensus 59 G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~ 123 (352)
|++..+++..+++.++...+...+.++..+..+++.+++.+++||+++..+++|.+++++|+.+.
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 44555677778888888889999999999999999999999999999999999999999998764
No 40
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.38 E-value=0.0014 Score=55.63 Aligned_cols=76 Identities=20% Similarity=0.322 Sum_probs=53.5
Q ss_pred chHHHHHHHH-HHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650 212 YPDTWFFMLV-VAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT 290 (352)
Q Consensus 212 ~~~~y~~l~~-~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv 290 (352)
.+..|.+++. ++.+.+.. .+.=+||+.++++.|+|+--. ...++++.++++++|..+. -...|++++.+|+
T Consensus 63 ~~k~~lflilSGla~glsw-l~Yf~ALk~G~as~VvPldk~-svvl~~lls~lfL~E~ls~------~~~iG~~LI~~Ga 134 (140)
T COG2510 63 GPKSWLFLILSGLAGGLSW-LLYFRALKKGKASRVVPLDKT-SVVLAVLLSILFLGERLSL------PTWIGIVLIVIGA 134 (140)
T ss_pred CcceehhhhHHHHHHHHHH-HHHHHHHhcCCcceEEEcccc-cHHHHHHHHHHHhcCCCCH------HHHHHHHHHHhCe
Confidence 4444444333 33343333 233389999999999998643 4467889999999996654 3558899999999
Q ss_pred hhhcc
Q 018650 291 ILLHT 295 (352)
Q Consensus 291 ~lLs~ 295 (352)
+++++
T Consensus 135 ilvs~ 139 (140)
T COG2510 135 ILVSL 139 (140)
T ss_pred eeEec
Confidence 99886
No 41
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.27 E-value=0.0066 Score=50.41 Aligned_cols=80 Identities=16% Similarity=0.138 Sum_probs=63.1
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Q 018650 209 QLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLS 288 (352)
Q Consensus 209 ~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~ 288 (352)
.|+++.+.... +++...-++++.+++++-|.++.+|+-.-.-++.+.+.|.++|||..+. .-..|..+++.
T Consensus 26 gf~~~~~~i~~---~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~------~~~~gi~lIi~ 96 (110)
T PRK09541 26 GFTRLWPSVGT---IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICA 96 (110)
T ss_pred CCCchhHHHHH---HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHH
Confidence 36777776643 3444555678899999999999999988777888999999999996653 56678889999
Q ss_pred HHhhhccCC
Q 018650 289 GTILLHTTK 297 (352)
Q Consensus 289 Gv~lLs~~~ 297 (352)
|++++...+
T Consensus 97 GVi~l~l~~ 105 (110)
T PRK09541 97 GVLVINLLS 105 (110)
T ss_pred HHHHHhcCC
Confidence 999996544
No 42
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=97.19 E-value=0.063 Score=52.85 Aligned_cols=70 Identities=23% Similarity=0.254 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 55 LWWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 55 ~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
.|-+=-++|.+-.-+++++++..|.+.-|...-+-++-++++...+|++|+++++|...++..+|+.++=
T Consensus 94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 3444456888877799999999999999999999999999999999999999999999999999998875
No 43
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.12 E-value=0.0059 Score=50.26 Aligned_cols=72 Identities=15% Similarity=0.122 Sum_probs=60.8
Q ss_pred cchhHHHHHH-HHHHHHHHHHHHHhhchhHHHhhh-hhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650 52 LEPLWWVGMA-IMIVGEVANFVAYAFAPAVLVTPL-GALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123 (352)
Q Consensus 52 ~~p~W~~G~~-l~~~g~~~~~~Al~~ap~slv~Pl-~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~ 123 (352)
+|+.|.+.++ .+++.+.+-..|+...|+.+.+++ .+++.+..++.+..++||+++..+++|..++++|++.+
T Consensus 28 ~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 28 TRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 3555655554 445777788888999999999987 67899999999999999999999999999999998865
No 44
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.11 E-value=0.22 Score=47.96 Aligned_cols=120 Identities=24% Similarity=0.253 Sum_probs=79.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHh----hHHHhhhhc-------------CcccCCcccccccchhHHHHHHHHHHHH
Q 018650 5 KDNLKGFVLALLSSFFIGSSFIIKKK----GLRRAAAAS-------------GVRAGVGGFTYLLEPLWWVGMAIMIVGE 67 (352)
Q Consensus 5 ~~~~iGv~LAl~ss~~~a~g~vlqk~----~~~~~~~~~-------------~~~~~~~~~~~l~~p~W~~G~~l~~~g~ 67 (352)
.+.--|+++++.+.++-+.--...|. +..+.-.+. -.|.-.+.++..++|+=+....+..+=.
T Consensus 3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li 82 (293)
T COG2962 3 KDSRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI 82 (293)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 44556899999998887766655554 111100000 0000012345678887777777776666
Q ss_pred HHHHHHHhhchhH---HHhhhhh-HHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 68 VANFVAYAFAPAV---LVTPLGA-LSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 68 ~~~~~Al~~ap~s---lv~Pl~a-~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
..|..-+.++|-+ +=+.+|- +..++|.++++.++|||+++.+|+++.+..+|+....
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~ 143 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT 143 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 7888888887765 3333332 3456789999999999999999999999999988643
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.10 E-value=0.00066 Score=64.65 Aligned_cols=115 Identities=17% Similarity=0.141 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc---c-----C-C---------ccccc-ccchhH----HHHHHHHH
Q 018650 8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR---A-----G-V---------GGFTY-LLEPLW----WVGMAIMI 64 (352)
Q Consensus 8 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~---~-----~-~---------~~~~~-l~~p~W----~~G~~l~~ 64 (352)
..|..+++.++++.+.+.++.|+...+.+.....- . . . +.... ...+.| +.+.+...
T Consensus 143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 222 (281)
T TIGR03340 143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIG 222 (281)
T ss_pred hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHH
Confidence 45778899999999999988887532211100000 0 0 0 00000 011112 23444455
Q ss_pred HHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650 65 VGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122 (352)
Q Consensus 65 ~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~ 122 (352)
++..+++.+++..|.+.+.++..++.+++.+++.+++||+++..+++|.+++++|+.+
T Consensus 223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 7788899999999999999999999999999999999999999999999999999875
No 46
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.06 E-value=0.0096 Score=50.80 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHH--HHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650 221 VVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASV--IMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD 298 (352)
Q Consensus 221 ~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~--i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~ 298 (352)
.++++......+++.++++.|.++.+|+....+.. ..+.+. ++|+|..+. ...+|.+++++|++++++.++
T Consensus 53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~-v~~~~~~~~~~~E~ls~------~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYAL-VYLAAMLLPWFNETFSL------KKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCH------HHHHHHHHHHHHHHHhccCCC
Confidence 55566667778899999999999999998877633 333444 489996553 567899999999999987655
No 47
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.02 E-value=0.014 Score=48.00 Aligned_cols=79 Identities=9% Similarity=0.184 Sum_probs=62.8
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Q 018650 209 QLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLS 288 (352)
Q Consensus 209 ~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~ 288 (352)
.|+++.++++. +++...-.+++.+++|.-|..+.+++-.-.=+..+.+.|.++|+|..+ + ...+|..+++.
T Consensus 25 gf~~~~~~~~~---i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~--~----~~~~gi~lIi~ 95 (105)
T PRK11431 25 GFSRLTPSIIT---VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESAS--P----ARLLSLALIVA 95 (105)
T ss_pred CCccHHHHHHH---HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCC--H----HHHHHHHHHHH
Confidence 47788777754 334455568899999999999998888888888999999999999665 3 45678889999
Q ss_pred HHhhhccC
Q 018650 289 GTILLHTT 296 (352)
Q Consensus 289 Gv~lLs~~ 296 (352)
|++.+...
T Consensus 96 GVv~l~l~ 103 (105)
T PRK11431 96 GIIGLKLS 103 (105)
T ss_pred HHHhhhcc
Confidence 99988544
No 48
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.96 E-value=0.018 Score=48.53 Aligned_cols=71 Identities=15% Similarity=0.294 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650 222 VAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD 298 (352)
Q Consensus 222 ~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~ 298 (352)
.+++...-++++.++++.-|.++.+|+..-.-++.+.+.|.++|+|..+. .-.+|..+++.|++++....+
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~------~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSL------MKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHhhcCCC
Confidence 34445555788999999999999999987778888999999999996653 566888899999999865543
No 49
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.94 E-value=0.0048 Score=57.47 Aligned_cols=117 Identities=21% Similarity=0.222 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcc------cC--------Cccc-c-cccchhH--HHHHHHHHHHHH
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVR------AG--------VGGF-T-YLLEPLW--WVGMAIMIVGEV 68 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~------~~--------~~~~-~-~l~~p~W--~~G~~l~~~g~~ 68 (352)
...|+.+++.++++.+...++.|+-. +........ .. .... + ..+...+ +.|++...++..
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~ 230 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYL 230 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999998643 111000000 00 0000 0 1111111 234444446788
Q ss_pred HHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 69 ANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 69 ~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
+++.++...|...++++..+..+++.+++..+++|+++..+++|+++++.|+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999988764
No 50
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.75 E-value=0.028 Score=46.29 Aligned_cols=78 Identities=19% Similarity=0.172 Sum_probs=61.3
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Q 018650 210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG 289 (352)
Q Consensus 210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~G 289 (352)
|+.+.++++ .+++...-.+++.+|+|+-|..+.+++-.-.=+..+.+.|+++|+|..+. .-..|..++++|
T Consensus 27 f~~~~~~il---~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~------~~~~gl~LiiaG 97 (106)
T COG2076 27 FTRLWPSIL---TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSL------IKLLGLALILAG 97 (106)
T ss_pred ccccchHHH---HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCH------HHHHHHHHHHHH
Confidence 556655554 23344555678999999999999999998888999999999999996653 566788899999
Q ss_pred HhhhccC
Q 018650 290 TILLHTT 296 (352)
Q Consensus 290 v~lLs~~ 296 (352)
++.|...
T Consensus 98 vi~Lk~~ 104 (106)
T COG2076 98 VIGLKLG 104 (106)
T ss_pred HHHhhhc
Confidence 9988654
No 51
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.72 E-value=0.03 Score=46.44 Aligned_cols=77 Identities=16% Similarity=0.206 Sum_probs=60.9
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Q 018650 209 QLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLS 288 (352)
Q Consensus 209 ~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~ 288 (352)
.|++|.+.+.. +++...-.+++.+++|+-|..+.+|+-.-.-+..+.+.|.++|+|..+ + ...+|..+++.
T Consensus 31 gf~~~~~~~~~---~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~--~----~~~~gi~lIi~ 101 (109)
T PRK10650 31 GFRRKIYGILS---LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLN--R----KGWIGLVLLLA 101 (109)
T ss_pred CCcchHHHHHH---HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCC--H----HHHHHHHHHHH
Confidence 47788776553 333444567899999999999999998888889999999999999665 3 56678888999
Q ss_pred HHhhhc
Q 018650 289 GTILLH 294 (352)
Q Consensus 289 Gv~lLs 294 (352)
|++++.
T Consensus 102 GVi~lk 107 (109)
T PRK10650 102 GMVMIK 107 (109)
T ss_pred HHHHhc
Confidence 998874
No 52
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=96.53 E-value=0.005 Score=59.17 Aligned_cols=62 Identities=13% Similarity=-0.039 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeee
Q 018650 64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI 125 (352)
Q Consensus 64 ~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~ 125 (352)
.++..+++.+++..|.+.++++.-+..+++.+++.++++|+++..++.|+++++.|+.++..
T Consensus 224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999877654
No 53
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.87 E-value=0.073 Score=42.61 Aligned_cols=63 Identities=11% Similarity=0.083 Sum_probs=32.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHH
Q 018650 210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASII 277 (352)
Q Consensus 210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~ 277 (352)
++++.+... .+.+...-.+++.+|+|+-|.++.+|+....-+....+.|..+|+|..+ +.++.
T Consensus 26 ~~~~~~~~~---~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s--~~~~~ 88 (93)
T PF00893_consen 26 FTQLIPTIL---AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLS--LSKWL 88 (93)
T ss_dssp --------H---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HH
T ss_pred hcchhhHHH---HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCC--HHHHh
Confidence 556555543 2334555668999999999999999999988889999999999999554 44443
No 54
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=95.77 E-value=0.025 Score=54.41 Aligned_cols=116 Identities=19% Similarity=0.135 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcC-ccc-----CCc--cccc-----ccchhHH----HHHHHHHHHHHH
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASG-VRA-----GVG--GFTY-----LLEPLWW----VGMAIMIVGEVA 69 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~-~~~-----~~~--~~~~-----l~~p~W~----~G~~l~~~g~~~ 69 (352)
...|++.+++|+++++.-...-|+.. ..+.... ... +.- ...+ ..++.+| .|++ ..+++.+
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~~ia~~~ 227 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLM-WGIGNFF 227 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHHH
Confidence 36799999999999998888877531 1000000 000 000 0011 1122333 4555 4677888
Q ss_pred HHHHHh-hchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccch----hhHHHHhhhhheee
Q 018650 70 NFVAYA-FAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGI----LGCVMCIAGSIIIV 124 (352)
Q Consensus 70 ~~~Al~-~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~----~G~~li~~G~~~~v 124 (352)
.+.+.. ..+.+...++.....+.+.+.+.+++||+.+++++ +|+++++.|+.++.
T Consensus 228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 888888 99999999999999999999999999999999999 99999999988764
No 55
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.60 E-value=0.11 Score=49.32 Aligned_cols=124 Identities=20% Similarity=0.200 Sum_probs=86.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCC-------------cccccccch-hHHHHHHHHH----HH
Q 018650 5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGV-------------GGFTYLLEP-LWWVGMAIMI----VG 66 (352)
Q Consensus 5 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~-------------~~~~~l~~p-~W~~G~~l~~----~g 66 (352)
+-...|+.+|+.+..|-+.=.+.-||.-+..+...+...|. ..-+-+.+| .-..++..-+ +=
T Consensus 144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalP 223 (292)
T COG5006 144 SLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALP 223 (292)
T ss_pred cCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccc
Confidence 45678999999999998877777666432111000000000 011233444 3344444333 34
Q ss_pred HHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecC
Q 018650 67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAP 128 (352)
Q Consensus 67 ~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p 128 (352)
..+..+|++..|...-.-+.++...+.++.+..+|||+++..+|+|+++++.++.-.....+
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence 56889999999999999999999999999999999999999999999999999876544333
No 56
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=95.49 E-value=0.057 Score=53.30 Aligned_cols=127 Identities=20% Similarity=0.295 Sum_probs=80.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-----Cc--------ccC-CcccccccchhHHHHHH-HHHHHHH
Q 018650 4 SKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-----GV--------RAG-VGGFTYLLEPLWWVGMA-IMIVGEV 68 (352)
Q Consensus 4 ~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-----~~--------~~~-~~~~~~l~~p~W~~G~~-l~~~g~~ 68 (352)
.++.++|-++++.|++++|+..++|++-.++.+... +. -.. .+ +.-+++-.|=.... +++...+
T Consensus 163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile-~~~i~~~~w~~~~~~~~v~~~~ 241 (334)
T PF06027_consen 163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILE-RSGIESIHWTSQVIGLLVGYAL 241 (334)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhee-hhhhhccCCChhhHHHHHHHHH
Confidence 357799999999999999999999999766543221 00 000 00 01111111211122 2223334
Q ss_pred HHHHHHhhchhHHHh------hh-hhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCC
Q 018650 69 ANFVAYAFAPAVLVT------PL-GALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQES 131 (352)
Q Consensus 69 ~~~~Al~~ap~slv~------Pl-~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~ 131 (352)
+.+.-|...|..+-. -+ ...+.+++++...++.|+++++.-++|.+++++|.++.....++++
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~ 311 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE 311 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence 566666666664421 12 2345788899999999999999999999999999888765554433
No 57
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=95.45 E-value=0.028 Score=53.96 Aligned_cols=119 Identities=17% Similarity=0.258 Sum_probs=79.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCccc-------CC----------cccccc----c------c--hh
Q 018650 5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRA-------GV----------GGFTYL----L------E--PL 55 (352)
Q Consensus 5 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~-------~~----------~~~~~l----~------~--p~ 55 (352)
+.+..|.++++.++++.++..++.||-.++.+.++ ... +. +..... . . ..
T Consensus 141 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (302)
T TIGR00817 141 SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDK-TNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKI 219 (302)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-ccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHH
Confidence 34577999999999999999999888544111110 000 00 000000 0 0 11
Q ss_pred HHHHHHH----HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 56 WWVGMAI----MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 56 W~~G~~l----~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
|..+... +......++.++...+.+...-.+.+..+++.+++.++++|+++..+++|.++++.|+.+.-
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 2112111 11222345567888899999999999999999999999999999999999999999987653
No 58
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=95.40 E-value=0.28 Score=40.17 Aligned_cols=69 Identities=20% Similarity=0.201 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 018650 224 ICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300 (352)
Q Consensus 224 ~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~~ 300 (352)
.+...+......|+++.+ ..+.|+.+ ..++++.+.|.++|+|..+ +. ...|.+++.+|++++..++...
T Consensus 43 ~~~~~~~~~~~~a~~~~~-~~v~~i~~-~~pi~~~ll~~~~~~er~~--~~----~~~a~~l~~~Gv~li~~~~~~~ 111 (113)
T PF13536_consen 43 LGFGVAYLLFFYALSYAP-ALVAAIFS-LSPIFTALLSWLFFKERLS--PR----RWLAILLILIGVILIAWSDLTG 111 (113)
T ss_pred HHHHHHHHHHHHHHHhCc-HHHHHHHH-HHHHHHHHHHHHHhcCCCC--HH----HHHHHHHHHHHHHHHhhhhccc
Confidence 333344566678888888 46665555 5889999999999999544 43 5567788899999988766544
No 59
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=95.32 E-value=0.047 Score=44.14 Aligned_cols=67 Identities=13% Similarity=0.276 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 018650 221 VVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLH 294 (352)
Q Consensus 221 ~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs 294 (352)
..+.+......+.++|+++.+++.+.++.+ ..++++.+.|.++++|..+ + ....|.++++.|++++.
T Consensus 59 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~~--~----~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 59 LGLLGTALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGERPS--W----RQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhccceehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCCC--H----HHHHHHHHHHHHHHHHH
Confidence 333433444577889999999999999888 6889999999999999655 3 46677778888887653
No 60
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=95.30 E-value=0.13 Score=43.86 Aligned_cols=113 Identities=20% Similarity=0.338 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHh----hhhcC----------------------cccC--Cccccccc-----chhH
Q 018650 10 GFVLALLSSFFIGSSFIIKKKGLRRA----AAASG----------------------VRAG--VGGFTYLL-----EPLW 56 (352)
Q Consensus 10 Gv~LAl~ss~~~a~g~vlqk~~~~~~----~~~~~----------------------~~~~--~~~~~~l~-----~p~W 56 (352)
|.++++.|+++.++=.+++|+..++. +..+. .+.. .......+ .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999877663 11100 0000 00000111 1122
Q ss_pred HHHHHHH-HHH---HHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650 57 WVGMAIM-IVG---EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122 (352)
Q Consensus 57 ~~G~~l~-~~g---~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~ 122 (352)
+.-++.. +.+ ...++..+........+=++.+--+...+++..+++|+++..++.|++++++|+..
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 2222222 223 34455556666777777788889999999999999999999999999999999864
No 61
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=95.25 E-value=0.94 Score=45.21 Aligned_cols=202 Identities=20% Similarity=0.280 Sum_probs=111.1
Q ss_pred HHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCC-----CCHHHHHHHhcC
Q 018650 71 FVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPI-----TSVQEIWSLATQ 145 (352)
Q Consensus 71 ~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~-----~t~~el~~~~~~ 145 (352)
=+||++-..+-.+=+.+.+=+|++.+|..+.+||++..+.+++++.+.|++++.....++... ..+.+++.+++.
T Consensus 177 naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA 256 (416)
T KOG2765|consen 177 NAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSA 256 (416)
T ss_pred HHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHHHHHHHH
Confidence 357888888888899999999999999999999999999999999999999887765433222 233344444332
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccCC-CcchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCcccc---chHHHHHHHH
Q 018650 146 PAFLLYVASVIVLVFILIFHFAPRCG-NTNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLL---YPDTWFFMLV 221 (352)
Q Consensus 146 p~fl~y~~~~~~~~~~l~~~~~~r~g-~~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~---~~~~y~~l~~ 221 (352)
+.|.+ -.+++-+..++.| +-.+-.+-+..|++-=+ .+ --.+ +.+..-+...|. ..+.=.+++.
T Consensus 257 ---~~Yav-----Y~vllk~~~~~eg~rvdi~lffGfvGLfnll-ll-wP~l---~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 257 ---LLYAV-----YTVLLKRKIGDEGERVDIQLFFGFVGLFNLL-LL-WPPL---IILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred ---HHHHH-----HHHHHHhhcccccccccHHHHHHHHHHHHHH-HH-hHHH---HHHHHhccCcccCCCCceeEeeeHh
Confidence 22211 1122234455564 33444444434432210 00 0000 111111322222 2222222222
Q ss_pred -HHHHHHHHHHHHHHhhcccCc-------cccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 018650 222 -VAICVIMQMNYLNKALDTFNT-------AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILL 293 (352)
Q Consensus 222 -~v~~~l~Q~~~ln~aL~~~~a-------~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lL 293 (352)
.+.+++.- ++.-+|.-..++ ++.+|+... +-.+ .++. +.++ .+.+|...+++|-+..
T Consensus 324 ~ligtvvSD-ylW~~a~~lTs~Lv~TlgmSltIPLA~~--------aD~l-~k~~-~~S~----~~iiGsi~Ifv~Fv~v 388 (416)
T KOG2765|consen 324 NLIGTVVSD-YLWAKAVLLTSPLVVTLGMSLTIPLAMF--------ADVL-IKGK-HPSA----LYIIGSIPIFVGFVIV 388 (416)
T ss_pred hHHHHHHHH-HHHHHHHHhccchhheeeeeEeeeHHHH--------HHHH-HcCC-CCCH----HHHHHHHHHHHHHhhe
Confidence 33344444 555666554444 455666433 3332 3332 2244 5677888888888777
Q ss_pred ccCCCCC
Q 018650 294 HTTKDFE 300 (352)
Q Consensus 294 s~~~~~~ 300 (352)
....+..
T Consensus 389 n~~~~~~ 395 (416)
T KOG2765|consen 389 NISSENS 395 (416)
T ss_pred ecccccc
Confidence 7655543
No 62
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=95.23 E-value=1.4 Score=42.65 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeee
Q 018650 56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIH 126 (352)
Q Consensus 56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~ 126 (352)
...=.++.+.|..+..++|-+-.++--|-+=..-++|..+++.-+||++++.++|+|...+.+|.+.+...
T Consensus 89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 34456788999999999999999999999999999999999999999999999999999999999888654
No 63
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=94.87 E-value=0.24 Score=47.45 Aligned_cols=86 Identities=20% Similarity=0.219 Sum_probs=63.2
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHh
Q 018650 213 PDTWFFM-LVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTI 291 (352)
Q Consensus 213 ~~~y~~l-~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~ 291 (352)
+..+..- +.++.-.+.| ..+=++.+.-..+...|+...+--+.+.+.|+++|+||... .+...-.+++++++.|++
T Consensus 42 ~~~~~~~~lsG~~W~iGq-~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~--~~~~~G~~Al~liiiGv~ 118 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQ-IGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTT--TQKIIGFLALVLIIIGVI 118 (269)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHHHHHH
Confidence 3444433 3344445666 44456778888899999999999999999999999999874 455555668899999999
Q ss_pred hhccCCCCCC
Q 018650 292 LLHTTKDFER 301 (352)
Q Consensus 292 lLs~~~~~~~ 301 (352)
+-+.+++.++
T Consensus 119 lts~~~~~~~ 128 (269)
T PF06800_consen 119 LTSYQDKKSD 128 (269)
T ss_pred Hhcccccccc
Confidence 8877666553
No 64
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.72 E-value=0.18 Score=49.33 Aligned_cols=61 Identities=16% Similarity=0.265 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheee
Q 018650 64 IVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 64 ~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v 124 (352)
.+|-++.-.++...|.+.+|-+-++..+++++++.++.+|+.++..+.-.+.++.|+.+..
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias 154 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIAS 154 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEee
Confidence 4677788889999999999999999999999999999999999999999888888877653
No 65
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=93.13 E-value=0.32 Score=44.55 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=80.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhh------c-----------C--cccCC--cccccc--cchhHHHHHHH
Q 018650 6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAA------S-----------G--VRAGV--GGFTYL--LEPLWWVGMAI 62 (352)
Q Consensus 6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~------~-----------~--~~~~~--~~~~~l--~~p~W~~G~~l 62 (352)
+.+.|+.+.+.+.++-+..-+.|+++.++.+.. . . ..++. ...+.+ ..+.+|.=.++
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL 161 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence 456777777778888888888888875542100 0 0 00000 001111 12333444455
Q ss_pred HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhh
Q 018650 63 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSI 121 (352)
Q Consensus 63 ~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~ 121 (352)
.++|..+-...+.+++.....=...+..+++.+++.++.+|+++...|.|+.++..|+.
T Consensus 162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF 220 (222)
T ss_pred HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence 56676777777888888899999999999999999999999999999999999998864
No 66
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=91.94 E-value=0.87 Score=37.34 Aligned_cols=49 Identities=18% Similarity=0.398 Sum_probs=40.0
Q ss_pred HHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCC
Q 018650 81 LVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQE 130 (352)
Q Consensus 81 lv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~ 130 (352)
+-+.-|.+-++.++.-..+.-|.++++.||.|.+.|.+|+.++ +++|..
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vi-l~~pR~ 108 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVI-LFGPRG 108 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeee-EeCCCC
Confidence 4456677888888888999999999999999999999996554 566653
No 67
>PRK02237 hypothetical protein; Provisional
Probab=90.93 E-value=1.3 Score=36.55 Aligned_cols=48 Identities=17% Similarity=0.360 Sum_probs=39.7
Q ss_pred HHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCC
Q 018650 81 LVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129 (352)
Q Consensus 81 lv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~ 129 (352)
+-+.-|.+=++.+.+-.+.+-|+|+++.|++|..+|.+|+.++. ++|.
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~-~~pR 108 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM-YAPR 108 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe-ecCC
Confidence 34455677778888899999999999999999999999998764 5664
No 68
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=90.77 E-value=0.34 Score=39.94 Aligned_cols=77 Identities=19% Similarity=0.330 Sum_probs=64.3
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcCC-ccchhhHHHHhhhhheee
Q 018650 47 GFTYLLEPLWWVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLP-QLGILGCVMCIAGSIIIV 124 (352)
Q Consensus 47 ~~~~l~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~~-~~~~~G~~li~~G~~~~v 124 (352)
.+.++.++.+|+=+++.--|..+.+.-++-+|.++.-|+. ++++.|+++++..+ +|+.. ++-+.|+.+++.|+.+.+
T Consensus 46 ~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 46 MKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhee
Confidence 4567788899999999999999999999999999999985 67888899888765 56554 666799999999986643
No 69
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=89.74 E-value=1.3 Score=37.08 Aligned_cols=52 Identities=17% Similarity=0.229 Sum_probs=41.8
Q ss_pred HhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhh
Q 018650 235 KALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTIL 292 (352)
Q Consensus 235 ~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~l 292 (352)
-.|.+.|-+..+|+.+..--+++++.|..+.+|..+ + -..+|..++++|+.+
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~--~----~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVIS--R----RTWLGMALILAGVAL 111 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccc--h----hHHHHHHHHHcCeee
Confidence 467889999999999888889999999888777643 2 246788888888865
No 70
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=89.50 E-value=19 Score=34.11 Aligned_cols=210 Identities=17% Similarity=0.181 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHH----HHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCC
Q 018650 56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALS----IIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQES 131 (352)
Q Consensus 56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~----lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~ 131 (352)
+.+--+.+.++.+.+=-|+.+.|-- -..++ .+=.++++..+.+.+-++++...+.+|++|+.++..--.+..
T Consensus 88 YaAcs~sYLlAMVssN~Alq~vpYP----TqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~ 163 (337)
T KOG1580|consen 88 YAACSASYLLAMVSSNQALQYVPYP----TQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG 163 (337)
T ss_pred HHHHHHHHHHHHHhccchhcccCCc----HHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC
Confidence 3444455556666666667776643 22222 334467788889999999999999999999998876533221
Q ss_pred ----CCCCHHHHHHHhcChhHHHHHHHHH-HHHHHH--HHhhcccCCCcchHHHHHHHH-hhhhHHHHHHHHHHHHHHHh
Q 018650 132 ----PITSVQEIWSLATQPAFLLYVASVI-VLVFIL--IFHFAPRCGNTNALVFIGICS-LMGSLSVMSVKALGTSLKLT 203 (352)
Q Consensus 132 ----~~~t~~el~~~~~~p~fl~y~~~~~-~~~~~l--~~~~~~r~g~~~~~~~~~i~g-llg~~tvl~~K~v~~~l~~~ 203 (352)
+..-..|+.. .+.+.. ..-... -.+..-+.+..+++.|.-.-+ ++-|...+.+ ++ +.+.
T Consensus 164 g~e~~t~g~GElLL---------~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfT---GE-lweF 230 (337)
T KOG1580|consen 164 GAEDKTFGFGELLL---------ILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFT---GE-LWEF 230 (337)
T ss_pred CCcccccchHHHHH---------HHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheeh---hh-HHHH
Confidence 2222223321 111100 000000 011122233455666654433 3223333322 11 1111
Q ss_pred hcCCccccchHHHH-HHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Q 018650 204 FEGKNQLLYPDTWF-FMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICG 282 (352)
Q Consensus 204 ~~g~~~~~~~~~y~-~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G 282 (352)
+ ...-+||..|. +....+.+++.| +|.=+-...|.+.... +....--++++++++++|+.. .++.||. |
T Consensus 231 ~--yF~~RhP~~~~~l~l~ai~s~LGQ-~fIF~tv~~FgPLtCS-ivTTTRKfFTil~SVllf~np--ls~rQwl----g 300 (337)
T KOG1580|consen 231 F--YFVQRHPYVFWDLTLLAIASCLGQ-WFIFKTVEEFGPLTCS-IVTTTRKFFTILISVLLFNNP--LSGRQWL----G 300 (337)
T ss_pred H--HHHHhccHHHHHHHHHHHHHHhhh-HHHHHHHHHhCCeeEE-EEeehHHHHHHHHHHHHhcCc--CcHHHHH----H
Confidence 0 01235776544 455556667777 6666667777653322 222334467899999999984 4566664 5
Q ss_pred HHHHHHHHhh
Q 018650 283 FVVVLSGTIL 292 (352)
Q Consensus 283 ~~lii~Gv~l 292 (352)
.++++.|...
T Consensus 301 tvlVF~aL~~ 310 (337)
T KOG1580|consen 301 TVLVFSALTA 310 (337)
T ss_pred HHHHHHHhhh
Confidence 5556655544
No 71
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=89.04 E-value=10 Score=36.65 Aligned_cols=232 Identities=16% Similarity=0.252 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhc-hhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCC
Q 018650 55 LWWVGMAIMIVGEVANFVAYAFA-PAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPI 133 (352)
Q Consensus 55 ~W~~G~~l~~~g~~~~~~Al~~a-p~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~ 133 (352)
.|..=+.++-.-.+.|=.|+.|. |.-+=-=+=+.+++.|+++++.++|.|-+.+++..++++.+|+++.-++..++...
T Consensus 66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 45555555555566776677663 22222224577899999999999999999999999999999998876665443321
Q ss_pred --CCHHHHHHHhcChhHHHHHHHHHHHHHHH----HH--hhcccCCCc--chHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 018650 134 --TSVQEIWSLATQPAFLLYVASVIVLVFIL----IF--HFAPRCGNT--NALVFIGICSLMGSLSVMSVKALGTSLKLT 203 (352)
Q Consensus 134 --~t~~el~~~~~~p~fl~y~~~~~~~~~~l----~~--~~~~r~g~~--~~~~~~~i~gllg~~tvl~~K~v~~~l~~~ 203 (352)
.+.++-...-..+.|++-.++...+.++- ++ ..++|+|+. ..+.|.=.-++=+ +- ...|-+.......
T Consensus 146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~-Fl-f~~~div~~~~~~ 223 (330)
T KOG1583|consen 146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPL-FL-FMGDDIVSHWRLA 223 (330)
T ss_pred hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccch-HH-HhcchHHHHHHHH
Confidence 11111100011133333222222111111 11 134667753 3444432222100 00 0111111111111
Q ss_pred hcCC------ccccchHHHHHHHHHHHHHHHHHHHHHHhhc---ccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHH
Q 018650 204 FEGK------NQLLYPDTWFFMLVVAICVIMQMNYLNKALD---TFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAA 274 (352)
Q Consensus 204 ~~g~------~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~---~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~ 274 (352)
.... --+.-|.-|..+ +..+++|-.+.-.-.. ..++ ..+.+.-..=-+.+.+.+.++|+. +++++
T Consensus 224 ~~se~~~~p~~g~~vP~~~~yL---l~n~L~Qy~CikgVy~L~te~~s-LTVTlvltlRKFvSLl~SiiyF~N--pft~~ 297 (330)
T KOG1583|consen 224 FKSESYLIPLLGFKVPSMWVYL---LFNVLTQYFCIKGVYILTTETSS-LTVTLVLTLRKFVSLLFSIIYFEN--PFTPW 297 (330)
T ss_pred hcCcceeccccCccccHHHHHH---HHHHHHHHHHHHhhhhhhceecc-eEEEEeeeHHHHHHHhheeeEecC--CCCHH
Confidence 1110 112234444432 2335666444322221 2222 222333333446788999999998 45676
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCC
Q 018650 275 SIISEICGFVVVLSGTILLHTTKD 298 (352)
Q Consensus 275 ~~~~~~~G~~lii~Gv~lLs~~~~ 298 (352)
++ +|..+++.|+.+-+....
T Consensus 298 h~----lGa~lVF~Gt~~fa~~~~ 317 (330)
T KOG1583|consen 298 HW----LGAALVFFGTLLFANVWN 317 (330)
T ss_pred HH----HHHHHHHHHHHHHHHHHc
Confidence 66 566778888877664443
No 72
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=88.48 E-value=0.31 Score=46.04 Aligned_cols=221 Identities=14% Similarity=0.227 Sum_probs=128.3
Q ss_pred ccchhHHHHHHHH---HHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcCcCCccch----hhHHHHhhhhhe
Q 018650 51 LLEPLWWVGMAIM---IVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHEKLPQLGI----LGCVMCIAGSII 122 (352)
Q Consensus 51 l~~p~W~~G~~l~---~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E~~~~~~~----~G~~li~~G~~~ 122 (352)
+.-..|..|++-= .+|...||-|......|...|+. +..++-+.+++.+.+||=-+..+. ++.++++.|..+
T Consensus 54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l 133 (288)
T COG4975 54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL 133 (288)
T ss_pred cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence 3334677777544 47888999999999999999986 578899999999999998887665 677888889888
Q ss_pred eeeecCCCCCCCCHHHHHHHhcChhHHHHHHHHHHH--HHHHHHhhcccCCCcchHHHHHHHHhhhhHHHHHHHHHHHHH
Q 018650 123 IVIHAPQESPITSVQEIWSLATQPAFLLYVASVIVL--VFILIFHFAPRCGNTNALVFIGICSLMGSLSVMSVKALGTSL 200 (352)
Q Consensus 123 ~v~~~p~~~~~~t~~el~~~~~~p~fl~y~~~~~~~--~~~l~~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~v~~~l 200 (352)
-....+.+++.++++.+.+ ....+.. +....|...+|. -+ +.+.++++-++++..+
T Consensus 134 Ts~~~~~nk~~~~~~n~kk----------gi~~L~iSt~GYv~yvvl~~~--f~----------v~g~saiLPqAiGMv~ 191 (288)
T COG4975 134 TSKQDRNNKEEENPSNLKK----------GIVILLISTLGYVGYVVLFQL--FD----------VDGLSAILPQAIGMVI 191 (288)
T ss_pred eeeeccccccccChHhhhh----------heeeeeeeccceeeeEeeecc--cc----------ccchhhhhHHHHHHHH
Confidence 7665554455545444332 1111100 000011112221 00 2445555555544332
Q ss_pred HH---hhcCCccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHH
Q 018650 201 KL---TFEGKNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASII 277 (352)
Q Consensus 201 ~~---~~~g~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~ 277 (352)
-. .....+-..+-.+|.-++.++.-...-+.++-.+=+...|+ ...+-+..- +.+.+.|..+++|.. +..++.
T Consensus 192 ~ali~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt-~FSlSQlgV-iisTiGGIl~L~ekK--tkkEm~ 267 (288)
T COG4975 192 GALILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVAT-SFSLSQLGV-IISTIGGILFLGEKK--TKKEMV 267 (288)
T ss_pred HHHHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceee-eeeHhhhee-eeeecceEEEEeccC--chhhhh
Confidence 21 11222233445556555444443333322221111222221 112222211 346688999999965 488999
Q ss_pred HHHHHHHHHHHHHhhhccCC
Q 018650 278 SEICGFVVVLSGTILLHTTK 297 (352)
Q Consensus 278 ~~~~G~~lii~Gv~lLs~~~ 297 (352)
....|.++++.|..++.-.|
T Consensus 268 ~v~iGiilivvgai~lg~~K 287 (288)
T COG4975 268 YVIIGIILIVVGAILLGIAK 287 (288)
T ss_pred hhhhhHHHHHHHhhhhheec
Confidence 99999999999999887544
No 73
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=88.37 E-value=15 Score=33.96 Aligned_cols=59 Identities=19% Similarity=0.260 Sum_probs=53.9
Q ss_pred HHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeee
Q 018650 67 EVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVI 125 (352)
Q Consensus 67 ~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~ 125 (352)
.-....|+.....+.+..+.+..-.|.-+++...||+|+...+++..++.+.|++++..
T Consensus 67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 45667889999999999999999999999999999999999999999999999888754
No 74
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=86.37 E-value=32 Score=33.00 Aligned_cols=183 Identities=11% Similarity=0.122 Sum_probs=97.1
Q ss_pred HHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCHHHHHHHhcChh
Q 018650 68 VANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSVQEIWSLATQPA 147 (352)
Q Consensus 68 ~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~~el~~~~~~p~ 147 (352)
.+-..++...|+-+.-.+-..+.+.-+.+..+ +.+|.+.+.+.+.|..++.-.++..+ +.|.+
T Consensus 86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sR------r~~d~vwvaLAvlGi~lL~p~~~~~~---~lDp~-------- 148 (292)
T COG5006 86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSR------RLRDFVWVALAVLGIWLLLPLGQSVW---SLDPV-------- 148 (292)
T ss_pred HHHHHHHHhccchhhhhhhhccHHHHHHHhcc------chhhHHHHHHHHHHHHhheeccCCcC---cCCHH--------
Confidence 34456788999999888888887776666554 45788888899999888764443333 22222
Q ss_pred HHHHHHHHHHHHHHHHHh-hcccCCC-cchHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcCCccccchHHHHHH-HHHHH
Q 018650 148 FLLYVASVIVLVFILIFH-FAPRCGN-TNALVFIGICSLMGSLSVMSVKALGTSLKLTFEGKNQLLYPDTWFFM-LVVAI 224 (352)
Q Consensus 148 fl~y~~~~~~~~~~l~~~-~~~r~g~-~~~~~~~~i~gllg~~tvl~~K~v~~~l~~~~~g~~~~~~~~~y~~l-~~~v~ 224 (352)
=..|..... .+...|. ..+|-|+ .+.-.=.++.-+++++-++= ++. .+....+.+|..-..- .+.+.
T Consensus 149 Gv~~Al~AG--~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~P---ig~-----~~ag~~l~~p~ll~laLgvavl 218 (292)
T COG5006 149 GVALALGAG--ACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLP---IGA-----AQAGPALFSPSLLPLALGVAVL 218 (292)
T ss_pred HHHHHHHHh--HHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhh---hhh-----hhcchhhcChHHHHHHHHHHHH
Confidence 233322222 2222232 2344442 11100001111112111110 010 1223345666544332 22333
Q ss_pred HHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHH
Q 018650 225 CVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEI 280 (352)
Q Consensus 225 ~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~ 280 (352)
+...--..-.-||++-++. ..-+..+.++.++.+.|+++++|.. ++.|+....
T Consensus 219 SSalPYsLEmiAL~rlp~~-~F~~LlSLePa~aAl~G~i~L~e~l--s~~qwlaI~ 271 (292)
T COG5006 219 SSALPYSLEMIALRRLPAR-TFGTLLSLEPALAALSGLIFLGETL--TLIQWLAIA 271 (292)
T ss_pred hcccchHHHHHHHhhCChh-HHHHHHHhhHHHHHHHHHHHhcCCC--CHHHHHHHH
Confidence 3333334445678877654 4556678899999999999999965 466665443
No 75
>PRK13499 rhamnose-proton symporter; Provisional
Probab=85.46 E-value=4.4 Score=40.31 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650 223 AICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDG-QTAASIISEICGFVVVLSGTILLHTTKD 298 (352)
Q Consensus 223 v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~-~~~~~~~~~~~G~~lii~Gv~lLs~~~~ 298 (352)
+.-.+.|+ .+-++.|.--.+.-.|+..-.-.+.+.+.+.++|+||+. .+..+......|.++++.|+.+-++...
T Consensus 81 ~~W~iG~i-~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 81 ALWGIGGI-TYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHhhhh-hHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33455553 334577878888889999998889999999999999971 1223344488999999999999988443
No 76
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=85.37 E-value=5.3 Score=38.40 Aligned_cols=114 Identities=19% Similarity=0.237 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCccc---------------------CC---cccccccchhHHHHHHHH
Q 018650 8 LKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRA---------------------GV---GGFTYLLEPLWWVGMAIM 63 (352)
Q Consensus 8 ~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~---------------------~~---~~~~~l~~p~W~~G~~l~ 63 (352)
..|+++.+++-++.+.-.+.|++-.++-+.++ .+. +. ...-....|..+.-+++.
T Consensus 153 ~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~-~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~ 231 (303)
T PF08449_consen 153 ALGIILLLLSLLLDAFTGVYQEKLFKKYGKSP-WELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLF 231 (303)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHH
Confidence 45999999999999999999999766543321 000 00 000111223333333332
Q ss_pred -HHHHHHHH---HHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650 64 -IVGEVANF---VAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122 (352)
Q Consensus 64 -~~g~~~~~---~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~ 122 (352)
..+.+++. .....-.....+-+..+.-+++.+++..+.+++++..+|.|++++..|..+
T Consensus 232 s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~ 294 (303)
T PF08449_consen 232 SLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL 294 (303)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence 23333332 222333334455566667788899999999999999999999999999765
No 77
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=84.33 E-value=2.8 Score=41.41 Aligned_cols=52 Identities=21% Similarity=0.304 Sum_probs=44.3
Q ss_pred HHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650 72 VAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123 (352)
Q Consensus 72 ~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~ 123 (352)
.++...+.....=.+.+--++..+++..+++|+++..+++|+++++.|+.+.
T Consensus 295 ~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 295 YCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 4566666666677777888999999999999999999999999999998753
No 78
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=84.21 E-value=33 Score=35.72 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=22.1
Q ss_pred HhhcccCCCcchHHHHHHHHhhhhHHHHHHHH
Q 018650 164 FHFAPRCGNTNALVFIGICSLMGSLSVMSVKA 195 (352)
Q Consensus 164 ~~~~~r~g~~~~~~~~~i~gllg~~tvl~~K~ 195 (352)
...+.|+|+|+.+.+..+-+++++......|.
T Consensus 81 ~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~ 112 (485)
T KOG0569|consen 81 GLLADRFGRKNALLLSNLLAVLAALLMGLSKS 112 (485)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999998776666666666666655554
No 79
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=83.88 E-value=1.5 Score=36.08 Aligned_cols=47 Identities=21% Similarity=0.458 Sum_probs=39.3
Q ss_pred HhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCC
Q 018650 82 VTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129 (352)
Q Consensus 82 v~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~ 129 (352)
-+.-|.+=++.+.+-.+.+-|+++++.|++|..+|.+|+.++. ++|.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~-~~PR 106 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL-FAPR 106 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE-ecCC
Confidence 3455677788888999999999999999999999999988764 5554
No 80
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=83.51 E-value=25 Score=31.93 Aligned_cols=57 Identities=16% Similarity=0.108 Sum_probs=39.0
Q ss_pred HHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHh
Q 018650 228 MQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTI 291 (352)
Q Consensus 228 ~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~ 291 (352)
.|..+.+-.++++|++ ..-+....-.+.+.+.+..+|+|... + ....|..+++.|++
T Consensus 164 ~~~~~v~~vlk~~~~~-~~~~~~~~~~~~s~lls~~~f~~~ls--~----~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 164 GGGLCIGGVVRYADNT-TKSFVTALSIILSTLASVRLFDAKIS--S----TFYLGAILVFLATF 220 (222)
T ss_pred hcCceeeehhHHhHHH-HHHHHHHHHHHHHHHHHHHHhcCCcc--H----HHHHHHHHHHeeeE
Confidence 3445677778888876 55555667778888899999998544 3 45566666666654
No 81
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=83.40 E-value=50 Score=32.81 Aligned_cols=285 Identities=14% Similarity=0.239 Sum_probs=141.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHH-----------------hhhhcCcccCCcccccccc----hhHHHHH-
Q 018650 3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRR-----------------AAAASGVRAGVGGFTYLLE----PLWWVGM- 60 (352)
Q Consensus 3 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~-----------------~~~~~~~~~~~~~~~~l~~----p~W~~G~- 60 (352)
|.++.++|++...+++++.+.=.+=.||= ++ .|-.-..-.-.+..+++++ -+|+.-+
T Consensus 1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 1 MNSAIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred CCchHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 56788899999999999987766655551 10 0000000000001111111 1222211
Q ss_pred -HHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHHHhcC-------cCCccchhhHHHHhhhhheeeeecCCCC
Q 018650 61 -AIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHFILHE-------KLPQLGILGCVMCIAGSIIIVIHAPQES 131 (352)
Q Consensus 61 -~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~~L~E-------~~~~~~~~G~~li~~G~~~~v~~~p~~~ 131 (352)
++-.+|-+..-.+.++.-.|+-+.+. .++.++..++-..+.++ +-.+.-++|++++++|+.+....+...+
T Consensus 80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke 159 (344)
T PF06379_consen 80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE 159 (344)
T ss_pred HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence 11134555555666666667666643 34555666666665443 2334566999999999998876664222
Q ss_pred CC--CCHHHHHHHhcChhHHHHHHHHHHHHHHHHHhh--c-c------cCCCcchHHHHHH----HHhhhhHHHHHHHHH
Q 018650 132 PI--TSVQEIWSLATQPAFLLYVASVIVLVFILIFHF--A-P------RCGNTNALVFIGI----CSLMGSLSVMSVKAL 196 (352)
Q Consensus 132 ~~--~t~~el~~~~~~p~fl~y~~~~~~~~~~l~~~~--~-~------r~g~~~~~~~~~i----~gllg~~tvl~~K~v 196 (352)
+. .+.+|. .+ .-+.++ +.+..+......+-. . | ..|... .|... --+.||+.+-..=++
T Consensus 160 ~~~~~~~~ef-n~--~kGl~i-Av~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~--l~~~l~~~vvv~~GGf~tN~~yc~ 233 (344)
T PF06379_consen 160 KELGEEAKEF-NF--KKGLII-AVLSGVMSACFNFGLDAGKPIHEAAVAAGVNP--LYANLPVYVVVLWGGFITNLIYCL 233 (344)
T ss_pred hhhccchhhh-hh--hhhHHH-HHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCc--HHHhCchhhhhhhhHHHHHHHHHH
Confidence 21 122221 11 111121 111111111111111 0 1 122211 11111 113445444333333
Q ss_pred HHHHH-HhhcCCccc--cch---HHHHHHHHHHHHHHHHHHHHHHhhcccC---ccccchhHHHHHHHHHHHHHHHHhcc
Q 018650 197 GTSLK-LTFEGKNQL--LYP---DTWFFMLVVAICVIMQMNYLNKALDTFN---TAVVSPIYYVMFTSLTILASVIMFKD 267 (352)
Q Consensus 197 ~~~l~-~~~~g~~~~--~~~---~~y~~l~~~v~~~l~Q~~~ln~aL~~~~---a~~v~Pi~~v~~t~~~i~~G~i~f~E 267 (352)
-...+ .+.+..+.+ ..+ .-|++.+..-+.=-.|..+...+-..-. ....-++......+++.+.|. .++|
T Consensus 234 ~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl-~lkE 312 (344)
T PF06379_consen 234 ILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL-ILKE 312 (344)
T ss_pred HHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 22222 112111112 122 2255544444455778888777643222 244566666666666666665 5799
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHhhhcc
Q 018650 268 WDGQTAASIISEICGFVVVLSGTILLHT 295 (352)
Q Consensus 268 ~~~~~~~~~~~~~~G~~lii~Gv~lLs~ 295 (352)
|.+.+........+|+.+++.++.++.-
T Consensus 313 WKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 313 WKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred hccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 9999998899999999999998877653
No 82
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=82.89 E-value=6 Score=38.46 Aligned_cols=80 Identities=18% Similarity=0.303 Sum_probs=51.5
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Q 018650 210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSG 289 (352)
Q Consensus 210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~G 289 (352)
+++|..|.=++..+.+.+.+. -|+...+++++.|+--... +++.+.+-.+++|..+. ....|+++++.|
T Consensus 48 l~~~~W~~G~~~~~~g~~~~~----~Al~~ap~slv~Plg~~~l-v~~~~~a~~~l~e~~~~------~~~~G~~l~i~G 116 (300)
T PF05653_consen 48 LRRPLWWIGLLLMVLGEILNF----VALGFAPASLVAPLGALSL-VFNAVLARFFLGEKLTR------RDIVGCALIILG 116 (300)
T ss_pred HhhHHHHHHHHHHhcchHHHH----HHHHhhhHHHHHHHHhhhh-hhHHHHhHHHhcccchH------hHHhhHHHHHhh
Confidence 344545543333333333332 4788889999999976544 56777788888996553 346788888889
Q ss_pred HhhhccCCCCC
Q 018650 290 TILLHTTKDFE 300 (352)
Q Consensus 290 v~lLs~~~~~~ 300 (352)
+.++..+.+++
T Consensus 117 ~~liv~~~~~~ 127 (300)
T PF05653_consen 117 SVLIVIFAPKE 127 (300)
T ss_pred heeeEEeCCCC
Confidence 87665554443
No 83
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=81.88 E-value=1.3 Score=42.08 Aligned_cols=70 Identities=23% Similarity=0.318 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCC
Q 018650 226 VIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKD 298 (352)
Q Consensus 226 ~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~ 298 (352)
.+.|+.-+ ||.+.-..+...|+..-+--+.+.+.|++.|+||.+ +.+.+.=..+.++++.|+++=+..++
T Consensus 70 s~GQ~~Qf-ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t--~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 70 SFGQANQF-KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTT--PTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhh-hheeeeeeeccccccchhhHhhceeeeEEEEeccCc--chhHHHHHHHHHHHHHhheEeeeecc
Confidence 45564333 578888888899999999989999999999999987 56676667777889999988776554
No 84
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=78.25 E-value=21 Score=36.39 Aligned_cols=75 Identities=16% Similarity=0.289 Sum_probs=42.1
Q ss_pred hhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCC-------------CCCCCCHHHHHHHhcChhHHH
Q 018650 84 PLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ-------------ESPITSVQEIWSLATQPAFLL 150 (352)
Q Consensus 84 Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~-------------~~~~~t~~el~~~~~~p~fl~ 150 (352)
--|+++....+.++-++.....+..-|++....++=..++....|+ +.+..+.+|+.++++.+.|..
T Consensus 145 ~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~ 224 (412)
T PF01306_consen 145 MWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWF 224 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHH
T ss_pred HHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHH
Confidence 4578888888888887777666666676654332222222111211 112235567889999999987
Q ss_pred HHHHHHHH
Q 018650 151 YVASVIVL 158 (352)
Q Consensus 151 y~~~~~~~ 158 (352)
+...+...
T Consensus 225 ~~l~v~g~ 232 (412)
T PF01306_consen 225 FVLFVIGV 232 (412)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 85
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=76.76 E-value=24 Score=33.16 Aligned_cols=111 Identities=18% Similarity=0.262 Sum_probs=72.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-------------------CcccCC--ccccccc--chhHHHHHH
Q 018650 5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAAS-------------------GVRAGV--GGFTYLL--EPLWWVGMA 61 (352)
Q Consensus 5 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~-------------------~~~~~~--~~~~~l~--~p~W~~G~~ 61 (352)
.+..+|+++.++++++-+.+-+...|-+|+.+... -.+++. .....+. +++-|.=++
T Consensus 110 ~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~ 189 (244)
T PF04142_consen 110 QNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIF 189 (244)
T ss_pred chhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHH
Confidence 35678999999999999999999888776643111 000000 0011222 122233333
Q ss_pred HHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHH
Q 018650 62 IMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVM 115 (352)
Q Consensus 62 l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~l 115 (352)
+.++|-+.-...+.++.-.+=.=-.+++++.+.+++..+.+.+++..-.+|+.+
T Consensus 190 ~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 190 LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 445555555666777777766677788999999999999999999887777654
No 86
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.18 E-value=25 Score=28.78 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=62.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHH---HHHhhchh
Q 018650 3 FSKDNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANF---VAYAFAPA 79 (352)
Q Consensus 3 ~~~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~---~Al~~ap~ 79 (352)
-|+.+...++|-+.|+++...+- +|+.+....+ .-..----|-+.++=+.+..-.|= ..|+.+.+
T Consensus 4 ~~~~~l~~vlLL~~SNvFMTFAW----YghLk~~~~p--------l~~~i~~SWGIA~fEY~LqvPaNRiG~~v~s~~QL 71 (116)
T COG3169 4 PMSVYLYPVLLLIGSNVFMTFAW----YGHLKFTNKP--------LVIVILASWGIAFFEYLLQVPANRIGHQVYSAAQL 71 (116)
T ss_pred CCchHHHHHHHHHhhHHHHHHHH----HHHHhccCCc--------hhHHHHHHhhHHHHHHHHhCccchhhhhhccHHHH
Confidence 36677788888888998866543 4544432110 000001123333333333222221 22444444
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhee
Q 018650 80 VLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIII 123 (352)
Q Consensus 80 slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~ 123 (352)
-..|- .+++.+-++++.++|||++++..++|..++..|+.++
T Consensus 72 K~mQE--VItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 72 KTMQE--VITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHH--HHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 44444 3455666889999999999999999999888877654
No 87
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=73.81 E-value=13 Score=35.47 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHH-----HhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 018650 251 VMFTSLTILASVI-----MFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300 (352)
Q Consensus 251 v~~t~~~i~~G~i-----~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~~ 300 (352)
..|...+++.|+. +|++..+ .+..-.+=.+|.++++.|..+.+.-|.++
T Consensus 86 liW~s~n~l~Gw~~grfGlFg~~~~-~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 86 LIWGSVNCLTGWASGRFGLFGLDPQ-VPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HHHHHHHHHHHHHHhhceecccccc-ccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 3566677777776 5666544 45566666778888888887777666555
No 88
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.
Probab=71.57 E-value=20 Score=33.40 Aligned_cols=60 Identities=18% Similarity=0.340 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccc------hhHHHHHHHHHHHH
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLE------PLWWVGMAIMIVGE 67 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~------p~W~~G~~l~~~g~ 67 (352)
.++|+.+.+++-++-.+++ .||+..++.+++.+.--..+.+++-|- -.+|.|+.+++.+.
T Consensus 121 ~~~g~~l~~~g~~~E~~AD-~Q~~~fk~~~~n~g~~~~~GLw~~sRHPNYfGE~l~W~g~~~~a~~~ 186 (235)
T PF06966_consen 121 DILGIALFLIGFLLETVAD-QQKYRFKKDPANKGKFCTTGLWRYSRHPNYFGEILFWWGIYLAAISS 186 (235)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhhCcccCCccccCCeeeeeeCchHHHHHHHHHHHHHHHHhh
Confidence 4778999999988888888 677767776553221111234454444 57788888887655
No 89
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=71.46 E-value=9.7 Score=38.24 Aligned_cols=122 Identities=20% Similarity=0.252 Sum_probs=82.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCccc--CC-cc------------cccccch------------hHHH
Q 018650 6 DNLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRA--GV-GG------------FTYLLEP------------LWWV 58 (352)
Q Consensus 6 ~~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~--~~-~~------------~~~l~~p------------~W~~ 58 (352)
...+|-++|+.||+++|+=.++-||-..++++.-+.+. |- +. ..++.+| ....
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 34889999999999999999999886544421101000 00 00 0011111 1245
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeec
Q 018650 59 GMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHA 127 (352)
Q Consensus 59 G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~ 127 (352)
|++-.++...+|..|...-.-.+++-=.++++..+++.=..+-+.+.+...++|.+.+.+|-+++-...
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 656666777788888777666666666677888888877777799999999999999999977765433
No 90
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=67.71 E-value=4.9 Score=33.13 Aligned_cols=92 Identities=17% Similarity=0.304 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHH---HHHHHHH-------HhhchhH
Q 018650 11 FVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVG---EVANFVA-------YAFAPAV 80 (352)
Q Consensus 11 v~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g---~~~~~~A-------l~~ap~s 80 (352)
++|-++|+++...+- +|+.|.... +|+|.+=++.-.+. ..++.=| ++.+.+-
T Consensus 4 i~LL~~SN~FMTfAW----YGHLK~~~~--------------~pl~~ail~SWgIAffEY~l~VPANRiG~~~~s~~QLK 65 (108)
T PF04342_consen 4 ILLLILSNIFMTFAW----YGHLKFKSS--------------KPLWIAILISWGIAFFEYCLQVPANRIGYQTFSLAQLK 65 (108)
T ss_pred hHHHHHHHHHHHHHH----HHHhhcccc--------------CcHHHHHHHHHHHHHHHHHHhCcchhhhccccCHHHHH
Confidence 566777888876654 555553211 25554333222221 1223222 3334444
Q ss_pred HHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650 81 LVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122 (352)
Q Consensus 81 lv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~ 122 (352)
+.|=. +++..-.+++.+++||++++...+|-++++.++.+
T Consensus 66 i~QEv--itL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 66 IIQEV--ITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHH--HhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 44433 34445578899999999999999999988777654
No 91
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=67.46 E-value=2.1 Score=40.84 Aligned_cols=59 Identities=25% Similarity=0.486 Sum_probs=51.1
Q ss_pred HHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCC
Q 018650 71 FVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQ 129 (352)
Q Consensus 71 ~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~ 129 (352)
.-|+.+-.+.-++=+-+-+++.-.++++++||-|-+..++.|++.|+.|+++++...-+
T Consensus 96 V~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ 154 (336)
T KOG2766|consen 96 VKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH 154 (336)
T ss_pred eeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence 45677777888888899999999999999999999999999999999999988754333
No 92
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=62.81 E-value=28 Score=29.83 Aligned_cols=66 Identities=27% Similarity=0.325 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhHHHhhhh-hHHHHHHHHHHHH----HhcCcCCccchhhHHHHhhhhhe
Q 018650 57 WVGMAIMIVGEVANFVAYAFAPAVLVTPLG-ALSIIVSAVLAHF----ILHEKLPQLGILGCVMCIAGSII 122 (352)
Q Consensus 57 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-a~~lv~~~~la~~----~L~E~~~~~~~~G~~li~~G~~~ 122 (352)
|.|=++-+.-..++.........+...-+. .-.++.++++-++ .-|++++.++.+|+.++++|+.+
T Consensus 68 ~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 68 YLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 444444433334444444444444433333 3445555666665 46799999999999999999763
No 93
>PF11970 Git3_C: G protein-coupled glucose receptor regulating Gpa2 C-term; InterPro: IPR022596 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor. Git3 is one of six proteins required for glucose-triggered adenylate cyclase activation, and is a G protein-coupled receptor responsible for the activation of adenylate cyclase through Gpa2 - heterotrimeric G protein alpha subunit, part of the glucose-detection pathway. Git3 contains seven predicted transmembrane domains, a third cytoplasmic loop and a cytoplasmic tail []. This family is the conserved C-terminal domain of the member proteins.
Probab=61.55 E-value=16 Score=28.21 Aligned_cols=50 Identities=16% Similarity=0.244 Sum_probs=39.3
Q ss_pred CccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Q 018650 241 NTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGT 290 (352)
Q Consensus 241 ~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv 290 (352)
....++|+.|++..++..+.+..-+.+..+.+|.-+...+.++...+.|.
T Consensus 12 r~mfiYP~~Yi~lwlfP~~~~~~~~~~~~~~~p~~~l~~i~~~~~~~~G~ 61 (76)
T PF11970_consen 12 RSMFIYPLVYIVLWLFPFAAHRMQYMYEIGHGPSFWLFCIAGFMQPSQGF 61 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHccCH
Confidence 34678999999999999999998888655656767777777777777776
No 94
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=57.64 E-value=16 Score=31.01 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=32.1
Q ss_pred HHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 018650 259 LASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTKDFE 300 (352)
Q Consensus 259 ~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~~~~ 300 (352)
+--+++|--..+-++|++.++++.+++++.|+++|.++-..+
T Consensus 20 LEemlW~fR~ED~tpWNysiL~Ls~vvlvi~~~LLgrsi~AN 61 (125)
T PF15048_consen 20 LEEMLWFFRVEDATPWNYSILALSFVVLVISFFLLGRSIQAN 61 (125)
T ss_pred HHHHHHheecCCCCCcchHHHHHHHHHHHHHHHHHHHHhHhc
Confidence 334454444445579999999999999999999999876544
No 95
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=56.78 E-value=52 Score=30.37 Aligned_cols=58 Identities=14% Similarity=0.084 Sum_probs=37.2
Q ss_pred HHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 018650 230 MNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLH 294 (352)
Q Consensus 230 ~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs 294 (352)
..+...|+++-+.+...-+.| ..++++.+.+..+++|.. +..++. |.++.++|++++.
T Consensus 84 ~~~~~~a~~~~~~~~a~~l~~-~~Pi~~~lla~~~l~Ek~--~~~~~l----~~~~~~~Gv~li~ 141 (256)
T TIGR00688 84 WWLFIWAVNNGSSLEVSLGYL-INPLVMVALGRVFLKERI--SRFQFI----AVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHcchHHHHHHHHH-HHHHHHHHHHHHHHhcCC--CHHHHH----HHHHHHHHHHHHH
Confidence 355666788776665555544 478889999999999954 454443 4444455665554
No 96
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=55.60 E-value=74 Score=30.94 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=40.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Q 018650 210 LLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICG 282 (352)
Q Consensus 210 ~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G 282 (352)
.++|..+..+.....-+..|..-.=-|..+....... .=|-..+.++++.|.++|+|. .++.|++...++
T Consensus 66 ~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaS-LGY~InPL~~VllG~lflkEr--ls~~Q~iAV~lA 135 (293)
T COG2962 66 LKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEAS-LGYFINPLVNVLLGRLFLKER--LSRLQWIAVGLA 135 (293)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHH-hHHHHHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Confidence 5677777765555444555543332333333222222 333346678999999999994 457776655544
No 97
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=54.09 E-value=2.8e+02 Score=29.03 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=19.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHh
Q 018650 243 AVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTI 291 (352)
Q Consensus 243 ~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~ 291 (352)
..+..+++.++. .++..|....+-..+.-..+.....+|+.+++++.+
T Consensus 342 GRv~si~~~~~~-g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 342 GRVFSIYQMVFF-GGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 344455554432 233333333333222222233445556555554443
No 98
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins.; GO: 0016021 integral to membrane
Probab=53.45 E-value=2.3e+02 Score=27.70 Aligned_cols=75 Identities=13% Similarity=0.212 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHH-HHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecC
Q 018650 54 PLWWVGMAIMIVGE-VANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAP 128 (352)
Q Consensus 54 p~W~~G~~l~~~g~-~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p 128 (352)
..--.|++++.... +.++..++..+..+..-.....+.+...++..++|-.-+..-.+|+...++|+.-+...+|
T Consensus 60 ~~Lr~gIVLlG~~l~~~~i~~~G~~~~~~~~~~v~~~~~~~~~lg~r~~~l~~~~~~Lia~GtsICG~SAi~A~a~ 135 (305)
T PF03601_consen 60 KLLRLGIVLLGFRLSFSDILALGWKGLLIIIIVVILTFLLTYWLGRRLFGLDRKLAILIAAGTSICGASAIAATAP 135 (305)
T ss_pred HHHHHHHHHHCccccHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhcccchHHHHHHHcc
Confidence 33446777776543 4556666665555555555555666666665666655555566777777888666555555
No 99
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=50.05 E-value=2.2e+02 Score=26.56 Aligned_cols=18 Identities=17% Similarity=-0.059 Sum_probs=11.2
Q ss_pred hhcccCCCcchHHHHHHH
Q 018650 165 HFAPRCGNTNALVFIGIC 182 (352)
Q Consensus 165 ~~~~r~g~~~~~~~~~i~ 182 (352)
+...|+|+|+.+....++
T Consensus 52 ~l~dr~g~r~~~~~~~~~ 69 (379)
T TIGR00881 52 SVSDRSNPRVFLPIGLIL 69 (379)
T ss_pred HHHHhhCCeehhHHHHHH
Confidence 456678888766555433
No 100
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=45.01 E-value=1.6e+02 Score=26.94 Aligned_cols=92 Identities=25% Similarity=0.279 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHH---HHhhchhHH--
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFV---AYAFAPAVL-- 81 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~---Al~~ap~sl-- 81 (352)
...|++--++.++..+...-+..+=.-+-.. +--+||.||=+++...+....|+. +-+|.|.++
T Consensus 123 ~~~GlItlll~a~vgGfamy~my~y~yr~~a-----------d~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~ 191 (226)
T COG4858 123 QVYGLITLLLTAVVGGFAMYIMYYYAYRMRA-----------DNSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNP 191 (226)
T ss_pred cchhHHHHHHHHHhhhHHHHHHHHHHHHhhc-----------ccccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCc
Confidence 3456666666666666666554442222111 112468889888887777766654 456677664
Q ss_pred HhhhhhHHHHHHHHHH-HHHhcCcCCccc
Q 018650 82 VTPLGALSIIVSAVLA-HFILHEKLPQLG 109 (352)
Q Consensus 82 v~Pl~a~~lv~~~~la-~~~L~E~~~~~~ 109 (352)
.-|-.++.++-..++| +|++|+|.+.+.
T Consensus 192 ~L~pi~l~IiGav~lalRfylkkk~NIqs 220 (226)
T COG4858 192 QLPPIALTIIGAVILALRFYLKKKKNIQS 220 (226)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 3344455555555555 567788877653
No 101
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=44.74 E-value=1.2e+02 Score=27.46 Aligned_cols=87 Identities=25% Similarity=0.316 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhhhcCcccCCcccccccchhHHHHHHHHHHHHHHHHHH---HhhchhH---HHh
Q 018650 10 GFVLALLSSFFIGSSFIIKKKGLRRAAAASGVRAGVGGFTYLLEPLWWVGMAIMIVGEVANFVA---YAFAPAV---LVT 83 (352)
Q Consensus 10 Gv~LAl~ss~~~a~g~vlqk~~~~~~~~~~~~~~~~~~~~~l~~p~W~~G~~l~~~g~~~~~~A---l~~ap~s---lv~ 83 (352)
|++--++.++..++.+.+-.+-..+.. .--+++.||-.++..++..+.+++. ..+.|.. .+.
T Consensus 112 gi~tli~~~i~~G~~~~~~~~~i~~~~------------~~~~r~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~ 179 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYFIFKYIYPYK------------KKKKRPSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLP 179 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccc------------ccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCC
Confidence 555555566666666655444333211 1122355666655555555555433 3334444 244
Q ss_pred hhhhHHHHHHHHHHHHHhcCcCCcc
Q 018650 84 PLGALSIIVSAVLAHFILHEKLPQL 108 (352)
Q Consensus 84 Pl~a~~lv~~~~la~~~L~E~~~~~ 108 (352)
|...+-+-..+...+++++.|.+.+
T Consensus 180 ~~~~iiig~i~~~~~~~lkkk~~i~ 204 (206)
T PF06570_consen 180 PWVYIIIGVIAFALRFYLKKKYNIT 204 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5555545555667788888887654
No 102
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=43.81 E-value=3.3e+02 Score=26.86 Aligned_cols=193 Identities=13% Similarity=0.114 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecCCCCCCCCH--HHHH
Q 018650 63 MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAPQESPITSV--QEIW 140 (352)
Q Consensus 63 ~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p~~~~~~t~--~el~ 140 (352)
..++.-++.-||.+..--...=-=+.-++=.+++..++-|+|.+..|.+-..++.+|+.++..+...+....+. ...+
T Consensus 93 n~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~ 172 (327)
T KOG1581|consen 93 NTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPI 172 (327)
T ss_pred hhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchH
Confidence 34677788888887665443333445566778888899999999999999999999999888775444222111 1111
Q ss_pred HHhcChhHHHHHHHHHHH-HHHHHH----hhcccCCCcchHHHHHHHHhhhhHHHH-HHHHHHHHHHHhhcCCccccchH
Q 018650 141 SLATQPAFLLYVASVIVL-VFILIF----HFAPRCGNTNALVFIGICSLMGSLSVM-SVKALGTSLKLTFEGKNQLLYPD 214 (352)
Q Consensus 141 ~~~~~p~fl~y~~~~~~~-~~~l~~----~~~~r~g~~~~~~~~~i~gllg~~tvl-~~K~v~~~l~~~~~g~~~~~~~~ 214 (352)
++.+. ..-++. ...-.. ...++...-+++.+.-.++.+-..+.+ ..+..=..+. -.-.||.
T Consensus 173 ------G~~Ll-~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~------F~~~hp~ 239 (327)
T KOG1581|consen 173 ------GILLL-FGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVS------FIKEHPD 239 (327)
T ss_pred ------hHHHH-HHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHH------HHHcChh
Confidence 11110 000000 000000 011222233455555554433222221 1110000000 0123777
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCC
Q 018650 215 TWFFMLVV-AICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDG 270 (352)
Q Consensus 215 ~y~~l~~~-v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~ 270 (352)
.+.=++.. ...++.| .|.---+++|.+.+..-++ ..=-.+++..+.++|+....
T Consensus 240 ~~~Di~l~s~~gavGQ-~FI~~TI~~FGslt~t~I~-ttRk~~si~lS~i~f~h~~s 294 (327)
T KOG1581|consen 240 VAFDILLYSTCGAVGQ-LFIFYTIERFGSLTFTTIM-TTRKMVSIMLSCIVFGHPLS 294 (327)
T ss_pred HHHHHHHHHHhhhhhh-heehhhHhhcccHHHHHHH-HHHHHHHHHHHHHHhCCccc
Confidence 65433333 3446666 5555567777654433333 22335789999999998544
No 103
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=41.60 E-value=52 Score=31.93 Aligned_cols=63 Identities=21% Similarity=0.204 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhhhccCC
Q 018650 225 CVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTILLHTTK 297 (352)
Q Consensus 225 ~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~lLs~~~ 297 (352)
+.++-++|--+-+...||+++.= .-++++++...++++|.- +. ..++|.++.+.|++++.|.+
T Consensus 109 tgvmlmyya~~~mslaDA~vItF----ssPvft~ifaw~~LkE~~--t~----~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITF----SSPVFTIIFAWAFLKEPF--TK----FEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEe----cChHHHHHHHHHHHcCCC--cH----HHHHHHHHhhheEEEEecCC
Confidence 34566677666777888754421 123457788999999943 44 56788889999999998764
No 104
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.42 E-value=17 Score=35.73 Aligned_cols=83 Identities=24% Similarity=0.241 Sum_probs=54.7
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHH
Q 018650 207 KNQLLYPDTWFFMLVVAICVIMQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVV 286 (352)
Q Consensus 207 ~~~~~~~~~y~~l~~~v~~~l~Q~~~ln~aL~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~li 286 (352)
.+-+.+|..|+=++.+.++=+. +| .|+.-.+++.+.|+--...+.+++++. .+++|-.+. .-.+|++++
T Consensus 59 ~~yl~~~~Ww~G~ltm~vGei~--NF--aAYaFAPasLVtPLGAlsvi~saila~-~~L~Ekl~~------~g~lGc~l~ 127 (335)
T KOG2922|consen 59 YGYLKEPLWWAGMLTMIVGEIA--NF--AAYAFAPASLVTPLGALSVIISAILAS-FFLKEKLNL------LGILGCVLC 127 (335)
T ss_pred cchhhhHHHHHHHHHHHHHhHh--hH--HHHhhchHhhhccchhHHHHHHHHHHH-HHHHHHHHH------hhhhheeEE
Confidence 3456777777644444333111 22 356778999999999888866665555 456775442 556899999
Q ss_pred HHHHhhhccCCCCC
Q 018650 287 LSGTILLHTTKDFE 300 (352)
Q Consensus 287 i~Gv~lLs~~~~~~ 300 (352)
++|..++-.+.+++
T Consensus 128 v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 128 VVGSTTIVIHAPKE 141 (335)
T ss_pred ecccEEEEEecCcc
Confidence 99997777666655
No 105
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=40.41 E-value=5e+02 Score=27.93 Aligned_cols=14 Identities=21% Similarity=0.461 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHH
Q 018650 57 WVGMAIMIVGEVAN 70 (352)
Q Consensus 57 ~~G~~l~~~g~~~~ 70 (352)
..|.++.++|.+..
T Consensus 112 i~g~~l~vvG~Iv~ 125 (599)
T PF06609_consen 112 IIGSLLGVVGSIVC 125 (599)
T ss_pred HHHHHHHHhHHHHh
Confidence 34444445555443
No 106
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=39.17 E-value=5.1e+02 Score=30.04 Aligned_cols=24 Identities=25% Similarity=0.602 Sum_probs=18.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHh
Q 018650 52 LEPLWWVGMAIMIVGEVANFVAYA 75 (352)
Q Consensus 52 ~~p~W~~G~~l~~~g~~~~~~Al~ 75 (352)
++-.||+-+++.+++.+++.+-..
T Consensus 74 ~r~Aw~~~~~~~~~~~~~~l~~~l 97 (1094)
T PRK02983 74 KRAAWWVLLAYLVLAALLNVALLA 97 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 346799999999888888776544
No 107
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=33.27 E-value=1.3e+02 Score=28.16 Aligned_cols=16 Identities=25% Similarity=0.430 Sum_probs=9.0
Q ss_pred HHHHHHHHhhhhHHHH
Q 018650 176 LVFIGICSLMGSLSVM 191 (352)
Q Consensus 176 ~~~~~i~gllg~~tvl 191 (352)
+....+|+++||+...
T Consensus 12 ~~~illg~~iGg~~G~ 27 (248)
T PF11368_consen 12 LLLILLGGLIGGFIGF 27 (248)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445556666666544
No 108
>PF06157 DUF973: Protein of unknown function (DUF973); InterPro: IPR009321 This family consists of several hypothetical archaeal proteins of unknown function.
Probab=32.96 E-value=4.6e+02 Score=25.38 Aligned_cols=32 Identities=9% Similarity=0.133 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhhh
Q 018650 7 NLKGFVLALLSSFFIGSSFIIKKKGLRRAAAA 38 (352)
Q Consensus 7 ~~iGv~LAl~ss~~~a~g~vlqk~~~~~~~~~ 38 (352)
....+...+++.+..-.++...|+|+++..+.
T Consensus 45 ~~~~i~~~ii~lvl~iia~~~lr~GF~~L~~~ 76 (285)
T PF06157_consen 45 LIVAIISLIIGLVLGIIAFYRLRRGFRILSSY 76 (285)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455666677777778888889998876643
No 109
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=31.91 E-value=6e+02 Score=26.34 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 018650 273 AASIISEICGFVVVLSGTILLHTTKDFER 301 (352)
Q Consensus 273 ~~~~~~~~~G~~lii~Gv~lLs~~~~~~~ 301 (352)
.++...+.-|++.++.|++++-+-||.|+
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 55667888899999999998888888774
No 110
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=31.69 E-value=43 Score=31.88 Aligned_cols=39 Identities=13% Similarity=0.245 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhcCcCCccchhhHHHHhhhhheeeeecC
Q 018650 90 IIVSAVLAHFILHEKLPQLGILGCVMCIAGSIIIVIHAP 128 (352)
Q Consensus 90 lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~~v~~~p 128 (352)
=.|+.+.+..+.+.+++.++|+|++++..+...=+..+.
T Consensus 278 KfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK 316 (337)
T KOG1580|consen 278 KFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK 316 (337)
T ss_pred HHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence 468888899999999999999999999999887666653
No 111
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.16 E-value=90 Score=31.33 Aligned_cols=22 Identities=9% Similarity=-0.002 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHhhhccCCC
Q 018650 277 ISEICGFVVVLSGTILLHTTKD 298 (352)
Q Consensus 277 ~~~~~G~~lii~Gv~lLs~~~~ 298 (352)
..+.+..+..+.+...+-++++
T Consensus 197 ~~~~~~alaAF~vL~r~~~~~~ 218 (439)
T KOG4255|consen 197 FAFTCAALAAFFVLYRLGAHWP 218 (439)
T ss_pred HHHHHHHHHHHHHHHhcCCCCC
Confidence 3444555566655555555544
No 112
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=28.76 E-value=33 Score=33.78 Aligned_cols=30 Identities=33% Similarity=0.380 Sum_probs=26.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 018650 5 KDNLKGFVLALLSSFFIGSSFIIKKKGLRR 34 (352)
Q Consensus 5 ~~~~iGv~LAl~ss~~~a~g~vlqk~~~~~ 34 (352)
+-+++|.+.|+.+.+..+.=.+++|+..++
T Consensus 159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~ 188 (316)
T KOG1441|consen 159 SFNLFGFISAMISNLAFALRNILSKKLLTS 188 (316)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 457899999999999999999999998754
No 113
>PRK03893 putative sialic acid transporter; Provisional
Probab=28.61 E-value=6e+02 Score=25.28 Aligned_cols=8 Identities=13% Similarity=0.186 Sum_probs=3.5
Q ss_pred cccCCCcc
Q 018650 167 APRCGNTN 174 (352)
Q Consensus 167 ~~r~g~~~ 174 (352)
..|.++++
T Consensus 335 ~dr~g~~~ 342 (496)
T PRK03893 335 GDWLGTRK 342 (496)
T ss_pred HHHhcchH
Confidence 34444444
No 114
>COG5522 Predicted integral membrane protein [Function unknown]
Probab=28.25 E-value=4.7e+02 Score=24.40 Aligned_cols=53 Identities=21% Similarity=0.256 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhchh---------HHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhh
Q 018650 66 GEVANFVAYAFAPA---------VLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIA 118 (352)
Q Consensus 66 g~~~~~~Al~~ap~---------slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~ 118 (352)
|...++.|+..=++ +..-=+.=.++.++++++.+.++||++.++.+-.++...
T Consensus 103 gig~sf~AlltPDl~~~~~p~l~~~lffitH~svfls~v~~~vhfreRpgksgl~~svl~~~ 164 (236)
T COG5522 103 GIGISFMALLTPDLQYLQVPWLEFLLFFITHISVFLSAVILIVHFRERPGKSGLVMSVLVAI 164 (236)
T ss_pred hhhHHHHHHHcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccchhHHHHHHH
Confidence 44445666555444 223334456778889999999999999999876665543
No 115
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=28.15 E-value=1.4e+02 Score=25.14 Aligned_cols=16 Identities=44% Similarity=0.694 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 018650 275 SIISEICGFVVVLSGT 290 (352)
Q Consensus 275 ~~~~~~~G~~lii~Gv 290 (352)
.+...+.|..+++.|+
T Consensus 85 ~~~~~i~g~~~~~~G~ 100 (136)
T PF08507_consen 85 SILSIIIGLLLFLVGV 100 (136)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555555566665
No 116
>TIGR02106 cyd_oper_ybgT cyd operon protein YbgT. This model describes a very small (as short as 33 amino acids) protein of unknown function, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It begins with an aromatic motif MWYFXW and appears to contain a membrane-spanning helix. This protein appears to be restricted to the Proteobacteria and exist in a single copy only. We suggest it may be a membrane subunit of the terminal oxidase. The family is named after the E. coli member YbgT. This model excludes the apparently related protein YccB.
Probab=23.59 E-value=1.1e+02 Score=19.52 Aligned_cols=22 Identities=14% Similarity=-0.055 Sum_probs=17.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 018650 4 SKDNLKGFVLALLSSFFIGSSF 25 (352)
Q Consensus 4 ~~~~~iGv~LAl~ss~~~a~g~ 25 (352)
.-.|++|+.+|+.-+++.++-+
T Consensus 3 YfaWilG~~lA~~~~v~~a~w~ 24 (30)
T TIGR02106 3 YFAWILGTLLACAFGVLNAMWL 24 (30)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999888877654
No 117
>PF04531 Phage_holin_1: Bacteriophage holin; InterPro: IPR006485 Phage proteins for bacterial lysis typically include a membrane-disrupting protein, or holin, and one or more cell wall degrading enzymes that reach the cell wall because of holin action. Holins are found in a large number of mutually non-homologous families. This entry is represented by the Bacteriophage phi-LC3, holin. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=22.93 E-value=2.6e+02 Score=21.85 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=15.1
Q ss_pred cccchhHHHHHHHHHHHHHHHH
Q 018650 50 YLLEPLWWVGMAIMIVGEVANF 71 (352)
Q Consensus 50 ~l~~p~W~~G~~l~~~g~~~~~ 71 (352)
-+++|.||++++..++-.+.++
T Consensus 7 R~kN~~~w~ali~~i~l~vq~~ 28 (84)
T PF04531_consen 7 RFKNKAFWVALISAILLLVQQV 28 (84)
T ss_pred cccCHHHHHHHHHHHHHHHHHH
Confidence 3689999999887654444333
No 118
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=22.91 E-value=46 Score=32.39 Aligned_cols=58 Identities=14% Similarity=0.193 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650 65 VGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122 (352)
Q Consensus 65 ~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~ 122 (352)
++...|-..|.+.|.+.-+===++..+|+.++...+||+|-+..-..+|.+++.|-.+
T Consensus 114 ~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l 171 (347)
T KOG1442|consen 114 LMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL 171 (347)
T ss_pred eehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee
Confidence 3334566667777777666666788999999999999999999999999999888553
No 119
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=22.91 E-value=4.3e+02 Score=21.72 Aligned_cols=49 Identities=29% Similarity=0.365 Sum_probs=32.3
Q ss_pred hcccCccccchhHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHhh
Q 018650 237 LDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDGQTAASIISEICGFVVVLSGTIL 292 (352)
Q Consensus 237 L~~~~a~~v~Pi~~v~~t~~~i~~G~i~f~E~~~~~~~~~~~~~~G~~lii~Gv~l 292 (352)
+++..+ +..-+...+=....++.|.++|+|. .++. -..|.++.+.|+++
T Consensus 102 i~~tS~-lt~~v~~~~K~~~~i~~s~~~f~~~--~t~~----~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 102 IKLTSP-LTYSVLGNVKRILVILLSVIFFGEP--ITPL----QIIGIVLALVGVLL 150 (153)
T ss_pred hhhcCh-hHHHHHHHHHHHHHHHHHhhhcCCc--CCHH----HHHHHHHHHHHHhe
Confidence 444433 2445555666788999999999986 4454 45666677777654
No 120
>PF08173 YbgT_YccB: Membrane bound YbgT-like protein; InterPro: IPR012994 This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in Escherichia coli. Members have a consensus motif (MWYFXW), which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to proteobacteria [].
Probab=22.90 E-value=1.2e+02 Score=19.07 Aligned_cols=22 Identities=14% Similarity=-0.007 Sum_probs=17.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 018650 4 SKDNLKGFVLALLSSFFIGSSF 25 (352)
Q Consensus 4 ~~~~~iGv~LAl~ss~~~a~g~ 25 (352)
.-.|++|+.+|..-++++++..
T Consensus 3 YfaWilG~~lA~~~~i~~a~wl 24 (28)
T PF08173_consen 3 YFAWILGVLLACAFGILNAMWL 24 (28)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 3468899999999888877643
No 121
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.22 E-value=1.5e+02 Score=25.93 Aligned_cols=38 Identities=26% Similarity=0.412 Sum_probs=25.2
Q ss_pred hhhHHHHHHHHHHHHHhc----CcCCccchhhHHHHhhhhhe
Q 018650 85 LGALSIIVSAVLAHFILH----EKLPQLGILGCVMCIAGSII 122 (352)
Q Consensus 85 l~a~~lv~~~~la~~~L~----E~~~~~~~~G~~li~~G~~~ 122 (352)
+-+-.++.++++=++=+. ++++..++.|++++++|+.+
T Consensus 102 ~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~ 143 (150)
T COG3238 102 VIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILL 143 (150)
T ss_pred HHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 334444555555554443 78888999999999999443
No 122
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=21.80 E-value=6e+02 Score=22.97 Aligned_cols=34 Identities=21% Similarity=0.486 Sum_probs=21.0
Q ss_pred HHHHHHhcccCCCCHHHHHHHHHHH--HHHHHHHhhhccCCC
Q 018650 259 LASVIMFKDWDGQTAASIISEICGF--VVVLSGTILLHTTKD 298 (352)
Q Consensus 259 ~~G~i~f~E~~~~~~~~~~~~~~G~--~lii~Gv~lLs~~~~ 298 (352)
..|..+|.++ -...++.|+ ++...|.+.|+++++
T Consensus 134 ~iG~~L~t~y------~l~fe~~silLLvAmIGAI~La~~~~ 169 (198)
T PRK06638 134 AIGILLFTDY------LLPFELASVLLLVAMVGAIVLARRER 169 (198)
T ss_pred HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 3477777764 233445554 456678888887654
No 123
>PRK15015 carbon starvation protein A; Provisional
Probab=20.43 E-value=1.1e+03 Score=25.96 Aligned_cols=40 Identities=15% Similarity=0.348 Sum_probs=21.9
Q ss_pred HhhhhhHHH----HHHHHHHHHHhcCcCCcc---chhhHHHHhhhhh
Q 018650 82 VTPLGALSI----IVSAVLAHFILHEKLPQL---GILGCVMCIAGSI 121 (352)
Q Consensus 82 v~Pl~a~~l----v~~~~la~~~L~E~~~~~---~~~G~~li~~G~~ 121 (352)
-.|-+..+. .++++++.++-+.|.++. ..+|++++.+.+.
T Consensus 188 ~sP~~~fsv~~tIpiAl~mG~~l~~~r~g~v~~~SiiGvvll~~aI~ 234 (701)
T PRK15015 188 HSPWGTYTVAFTIPLALFMGIYLRYLRPGRIGEVSVIGLVFLIFAII 234 (701)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHheeecCCchHHHHHHHHHHHHHHHH
Confidence 345555544 445555555555566555 4466666655544
No 124
>PRK12911 bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Probab=20.07 E-value=1.4e+03 Score=27.32 Aligned_cols=64 Identities=20% Similarity=0.130 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhHHHHHHHHHHHHHhcCcCCccchhhHHHHhhhhhe
Q 018650 56 WWVGMAIMIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILHEKLPQLGILGCVMCIAGSII 122 (352)
Q Consensus 56 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~a~~lv~~~~la~~~L~E~~~~~~~~G~~li~~G~~~ 122 (352)
.+++.+..++-.+..++.|.|. .+++++..+..+.-.+....+++-.++...+.|.++.+ |..+
T Consensus 912 ilA~lIglaLVlIFMlL~YRf~--GliA~IALll~VlltLg~LsLlGitLTLpgIAGIILlI-GmAV 975 (1403)
T PRK12911 912 IISVCLGLAVLIVLMSVYYRFG--GVIASGAVLLNLLLIWAALQYLDAPLTLSGLAGIVLAM-GMAV 975 (1403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HHhh
Confidence 3444444444445555666664 55666666555555666777889999999888777655 6543
Done!