BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018657
(352 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 204 bits (520), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 174/293 (59%), Gaps = 33/293 (11%)
Query: 5 SLDNSHSSSLYCGEEDAAAAADGGSDMVSCDTTDTWIFHNQSPAFDVVDDADADDVVSRL 64
S+ S+ L+CGE+ + + D S + D+W D ++
Sbjct: 13 SVSFSNDMDLFCGEDSGVFSGESTVDFSSSEV-DSW----------------PGDSIACF 55
Query: 65 IDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRF 124
I E E H + DYL RF+ S+ +AR+DS+ WIL V A Y F+P+TA L+VNY DRF
Sbjct: 56 I--EDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRF 113
Query: 125 LSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRV 184
L + LP +GWP+QLL+VACLSLAAKMEE VP L D Q+ +++FE KT++RMEL V
Sbjct: 114 LYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLV 173
Query: 185 MSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWS-SSDLIIRTTRVVNFLGFAP 243
+SVL+WRL S+TPFD++ +F K+ S G+F F S ++++I+ + +FL + P
Sbjct: 174 LSVLDWRLRSVTPFDFISFFAYKIDPS----GTFLGFFISHATEIILSNIKEASFLEYWP 229
Query: 244 STIAAAAVLCAAGE--SL-------DSPAICHQRLNEEMVRSCHQLMEEYLID 287
S+IAAAA+LC A E SL +SP L++E + C++LM+ I+
Sbjct: 230 SSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMAIE 282
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 167/286 (58%), Gaps = 22/286 (7%)
Query: 57 ADDVVSRLIDRESETHHMLHPDYLHRFR----DCSVFVTARQDSINWILNVHANYKFRPV 112
+++ V+RL+ E+E HM DY R R D + + R D+I+WI VH+ Y F P+
Sbjct: 65 SEECVARLV--ETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPL 122
Query: 113 TALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVF 172
TA L+VNY DRFLS + LP W QLL+VACLSLAAKMEET VP LDLQ+ + R+VF
Sbjct: 123 TACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVF 182
Query: 173 EPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRT 232
E KT+QRMEL V+S L WR+ ++TPF Y+ YF+ +L G R SS+LI+
Sbjct: 183 EAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSG---RSALLSSELILCI 239
Query: 233 TRVVNFLGFAPSTIAAAAVLCAAGESLDSPAICHQRLNEEMVRSCHQLMEEY-LIDTCPS 291
R LGF PS IAAA GE + A H +N+E + C ++++ LI PS
Sbjct: 240 ARGTECLGFRPSEIAAAVAAAVVGE--EHAAFSH--VNKERMSHCQEVIQAMELIHPKPS 295
Query: 292 --AQVKDQSEEPQVAPPSPVGVLDAAACGSCDTRSDNPGSSNQVEA 335
++V S P+ SP GVLDAA C S RSD+ ++ A
Sbjct: 296 SPSRVFVSSSIPR----SPTGVLDAAGCLS--YRSDDSAVASHYAA 335
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 191 bits (484), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 184/344 (53%), Gaps = 24/344 (6%)
Query: 11 SSSLYCGEEDAAAAADGGSDMVSCDTTDTWIFHNQSPAFDVVDD--ADADDVVSRLIDRE 68
+S L C E D A D G + +W+ + D+ D +DD + L+ RE
Sbjct: 9 ASILLCAE-DNTAILDLGEE----SEEISWVVGVDASLGDLSMDFPLQSDDCIEALLGRE 63
Query: 69 SETHHMLHPDYLHRFR---DCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFL 125
E H+ YL R D V R D+I+WI VH YKF P+TA+LSVNY DRFL
Sbjct: 64 -EQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFL 122
Query: 126 SSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVM 185
S LP QLL+VA LSLAAKMEET VP LDLQ+ D ++VFE +T++RMEL V+
Sbjct: 123 SVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVL 182
Query: 186 SVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPST 245
+ L WR+ ++T ++ Y++ K + + T L S DLI+ T +V FL F PS
Sbjct: 183 NALKWRMQAVTACSFIDYYLHKF---NDDDTPSTSALSRSVDLILSTCKVAEFLVFRPSE 239
Query: 246 IAAAAVLCAAGES----LDSPAICHQRLNEEMVRSCHQLMEEYLIDTCPSAQVKDQSEEP 301
IAA+ L A E + A C++ L +E V C++++++ +I + QS
Sbjct: 240 IAASVALVALEEHETSMFERVATCYKNLKKERVLRCYEMIQDKII----MRNIMRQSAGS 295
Query: 302 QVA-PPSPVGVLDAAACGSCDTRSDNPGS-SNQVEAELCAKRLR 343
+ P SP+GVLDAAAC S + GS + E+ +KR R
Sbjct: 296 VFSIPKSPIGVLDAAACISQQSEDTFVGSPATNYESSASSKRRR 339
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 187 bits (476), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 158/270 (58%), Gaps = 26/270 (9%)
Query: 55 ADADDVVSRLIDRESETHHMLHPDYLHRFRDCSV-FVTARQDSINWILNVHANYKFRPVT 113
+++++++ ++++E + H+ DY+ R R + R+D++NWI ++F P+
Sbjct: 41 SESEEIIMEMVEKEKQ--HLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLC 98
Query: 114 ALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFE 173
L++NY DRFLS H LP GW LQLL+VACLSLAAK+EET+VP+L+DLQ+ DP+FVFE
Sbjct: 99 FCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFE 158
Query: 174 PKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTT 233
K+VQRMEL V++ L WRL +ITP Y+ YF+ K+ EP + + S +I TT
Sbjct: 159 AKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSN--TLISRSLQVIASTT 216
Query: 234 RVVNFLGFAPSTIAAAAVLCAAGE----SLDSPAI--CHQRLNEEMVRSCHQLMEEYLID 287
+ ++FL F PS +AAA L +GE D+ + L +E V+ +++E D
Sbjct: 217 KGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIESDGSD 276
Query: 288 TCPSAQVKDQSEEPQVAPPSPVGVLDAAAC 317
C +P GVL+ +AC
Sbjct: 277 LCSQ---------------TPNGVLEVSAC 291
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 175/306 (57%), Gaps = 24/306 (7%)
Query: 56 DADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTAL 115
D+D+ V+ L+++E + H YL + + + R+D+I+WI VH+ Y F P++
Sbjct: 60 DSDEFVALLVEKEMD--HQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLY 117
Query: 116 LSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPK 175
L+VNY DRFLSS LP W QLLSV+CLSLA KMEET VPL +DLQ+FD +VFE +
Sbjct: 118 LAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEAR 177
Query: 176 TVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRV 235
++RMEL VM L WRL ++TPF ++ YF+ K + +P S+T W SDL + T +
Sbjct: 178 HIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKF--NEGKPPSYTLASW-CSDLTVGTLKD 234
Query: 236 VNFLGFAPSTIAAAAVLCAAGES---LDSPAICHQRL--NEEMVRSCHQLMEEYLIDTCP 290
FL F PS IAAA VL E+ + + A+ + N+EMV C++LM ++
Sbjct: 235 SRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESEIPVNKEMVMRCYELM----VEKAL 290
Query: 291 SAQVKDQSEEPQVAPPSPVGVLDAA---------ACGSCDTRSDNPGSSNQVEAELCAKR 341
++++ + V P SP+ VLDAA GS + S+N ++Q A +R
Sbjct: 291 VKKIRNSNASSSV-PHSPITVLDAACFSFRSDDTTLGSSQSNSNNKDYNSQDSAPASKRR 349
Query: 342 LRSSAP 347
++ P
Sbjct: 350 RLNTTP 355
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 184 bits (468), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 160/287 (55%), Gaps = 30/287 (10%)
Query: 7 DNSHSSSLYCGEEDAAAAADGGSDMVSCDTTDTWIFHNQSPAFDVVDDADADDVVSRLID 66
D+ +S L C E+ AA D D+ +C T D S + + A + ++ LI
Sbjct: 4 DDDDASYLLCAEDAGAAVFDVAVDISTCTTEDD---ECCSVGGEELYSAAS---IAELIG 57
Query: 67 RESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLS 126
E+E + DY R R S+ AR +S++WIL V F P+TA L+VNY DRFLS
Sbjct: 58 GEAE--YSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLS 115
Query: 127 SHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMS 186
LP GW +QLL+VACLSLAAKMEET VP LLDLQ+ R+VFEP+T+ RME +++
Sbjct: 116 LRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILT 175
Query: 187 VLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTI 246
LNWRL S+TPF ++ +F K S+ ++ + FL PS++
Sbjct: 176 ALNWRLRSVTPFTFIDFFACK---------------HISNAMVQNANSDIQFLDHCPSSM 220
Query: 247 AAAAVLCAAGES----LDSPAICHQ---RLNEEMVRSCHQLMEEYLI 286
AAAAVLCA GE+ +P + L EE + SC+QLM++ +I
Sbjct: 221 AAAAVLCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLMQQLVI 267
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 184 bits (467), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 141/236 (59%), Gaps = 13/236 (5%)
Query: 59 DVVSRLIDRESETHHMLHPDYLHRFRDCS-VFVTARQDSINWILNVHANYKFRPVTALLS 117
DVV+ LI E+E H DY R R + AR DS+ WIL V Y PVTA L+
Sbjct: 81 DVVAELIGGEAERSHSPRADYPGRLRSGRPADLAARADSVAWILKVRELYGMLPVTAYLA 140
Query: 118 VNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTV 177
V+Y DRFLS H LP NGW +QLL+V CLSLAAKMEET VP +LDLQ+ D R++FE +T+
Sbjct: 141 VSYMDRFLSLHRLP-GNGWAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTI 199
Query: 178 QRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVN 237
RMEL V+ L+WRL SITPF +++ F K+ + + ++ + + T
Sbjct: 200 FRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKH---IRELIHQATQVTLATIHDTE 256
Query: 238 FLGFAPSTIAAAAVLCAAGESLDSPAICHQR--------LNEEMVRSCHQLMEEYL 285
FL PS+IAAAAVLCA+ E + +I H L+EE + C++LM++ +
Sbjct: 257 FLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQQLI 312
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Query: 57 ADDVVSRLIDRESETHHMLHPDYLHRFRDCS--VFVTARQDSINWILNVHANYKFRPVTA 114
+++ V+ L++RE HM DY R R V + R ++I WI V+ Y F VTA
Sbjct: 74 SEECVASLVEREQA--HMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSVTA 131
Query: 115 LLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEP 174
L+VNY DRFLS + LP W QLLSVACLS+AAKMEET VP LDLQI +PRF+FE
Sbjct: 132 YLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEV 191
Query: 175 KTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTR 234
+T+ RMEL V++ LNWR+ ++TPF Y+ YF+ KL + ++ P S +L SS+LI+R
Sbjct: 192 ETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRS---WLLRSSELILRIAA 248
Query: 235 VVNFLGFAPSTIAAAAVLCAAGES 258
FL F PS IAAA AGE+
Sbjct: 249 GTGFLEFRPSEIAAAVAATVAGEA 272
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 135/229 (58%), Gaps = 6/229 (2%)
Query: 56 DADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTAL 115
+++++V +I E E H DYL R R+ + R ++ WI +F P+
Sbjct: 34 ESEEIVREMI--EKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCIC 91
Query: 116 LSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPK 175
L++NY DRFLS H LP W +QLL+VACLSLAAK+EET VP L+ LQ+ P FVFE K
Sbjct: 92 LAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAK 151
Query: 176 TVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRV 235
+VQRMEL V++VL WRL ++TP Y+ YF+SK+ EP S R + S +I TT+
Sbjct: 152 SVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHS--RLVTRSLQVIASTTKG 209
Query: 236 VNFLGFAPSTIAAAAVLCAAGESLDS--PAICHQRLNEEMVRSCHQLME 282
++FL F S IAAA L +GE D + L +E V+ +++E
Sbjct: 210 IDFLEFRASEIAAAVALSVSGEHFDKFSFSSSFSSLEKERVKKIGEMIE 258
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 141/251 (56%), Gaps = 22/251 (8%)
Query: 78 DYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWP 137
DY+ R + ++ R +++WIL V A+Y F + LS+NY DRFL+S+ LP W
Sbjct: 82 DYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWA 141
Query: 138 LQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITP 197
QLL+V+CLSLA+KMEET VP ++DLQ+ DP+FVFE KT++RMEL V++ LNWRL ++TP
Sbjct: 142 AQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTP 201
Query: 198 FDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPS---------TIAA 248
F ++ YF+ K+ SE ++ SS I+ TT+ + FL F PS +
Sbjct: 202 FSFIDYFVDKISGHVSE-----NLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSIS 256
Query: 249 AAVLCAAGESLDSPAICHQRLNEEMVRSCHQLMEEYLIDTCPSAQVKDQSEEPQVA---- 304
C E S I + +E V+ C LM + Q E+ +VA
Sbjct: 257 GETECIDEEKALSSLI---YVKQERVKRCLNLMRSLTGEENVRGTSLSQ-EQARVAVRAV 312
Query: 305 PPSPVGVLDAA 315
P SPVGVL+A
Sbjct: 313 PASPVGVLEAT 323
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 131/228 (57%), Gaps = 16/228 (7%)
Query: 68 ESETHHMLHP---DYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRF 124
E E M+ +YL + + + ++ R +I+WI V A Y F P+ A L+VNY DRF
Sbjct: 76 EKEVEQMVETARGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRF 135
Query: 125 LSSHFLPLANG--WPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMEL 182
LSS + N W QLL VACLSLAAKMEET P LDLQ+ +P +VF+ +T+ RME+
Sbjct: 136 LSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEI 195
Query: 183 RVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSS-SDLIIRTTRVVNFLGF 241
V++ L WR+ ++TPF Y+ +F+ K+ +E T L S +++I+ T + FL F
Sbjct: 196 IVLTTLKWRMQAVTPFTYIGHFLDKI----NEGNRITSELISRCTEIILSTMKATVFLRF 251
Query: 242 APSTIAAA---AVLCAAGESLDSPAICHQR---LNEEMVRSCHQLMEE 283
PS IA A +V+ G LD + ++++ V CHQ M+E
Sbjct: 252 RPSEIATAVALSVVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQE 299
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 132/224 (58%), Gaps = 28/224 (12%)
Query: 95 DSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEE 154
+S++WIL V + + F+P TA L+V+Y DRF+SS LP +GW QLL VACLSLAAKMEE
Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLP-DHGWASQLLCVACLSLAAKMEE 185
Query: 155 TQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSE 214
+ P LLDLQI RF+FEP+T+QRMEL V+ L+WRL S+TPF ++ +F K+ +S
Sbjct: 186 SSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSS--- 242
Query: 215 PGSFTRFL-WSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAAGESLDSPAICHQR----- 268
G +R L + +I+ + FL S++AAAAVL A E SPA R
Sbjct: 243 -GRSSRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNE---SPAAMSHRSSVSS 298
Query: 269 ---------LNEEMVRSCHQLMEEYLIDTCPSAQVKDQSEEPQV 303
L EE + SC+QL++ L +A + + P +
Sbjct: 299 ESAASWCIGLTEERISSCYQLLQRAL-----NATARKRKRHPMI 337
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 144/263 (54%), Gaps = 23/263 (8%)
Query: 58 DDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLS 117
DD + LI +E+ET+ L F V+ R+++++W+L V ++Y F +TA+L+
Sbjct: 66 DDEILSLISKENETNPCFGEQILDGF-----LVSCRKEALDWVLRVKSHYGFTSLTAILA 120
Query: 118 VNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTV 177
VNYFDRF++S L W QL++VA LSLAAK+EE QVPLLLDLQ+ + R++FE KT+
Sbjct: 121 VNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTI 180
Query: 178 QRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVN 237
QRMEL ++S L WR++ +TP + + I + + + F R L+I
Sbjct: 181 QRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCR---KCERLLISVIADTR 237
Query: 238 FLGFAPSTIAAAAVLCAAGESLDSPAICHQ-------RLNEEMVRSCHQLMEEYLIDTCP 290
F+ + PS +A A ++ E + +Q ++N+E V C++L+ E+
Sbjct: 238 FMRYFPSVLATAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELLLEHNPSKKR 297
Query: 291 SAQVKDQSEEPQVAPPSPVGVLD 313
+ DQ SP GVLD
Sbjct: 298 MMNLVDQD--------SPSGVLD 312
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 132/219 (60%), Gaps = 11/219 (5%)
Query: 91 TARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAA 150
T R++++ WIL V+A+Y F + A+L++ Y D+F+ S+ L W LQL+SVACLSLAA
Sbjct: 85 TDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAA 144
Query: 151 KMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPA 210
K+EETQVPLLLD Q+ + ++VFE KT+QRMEL ++S L W+++ ITP ++ + I +L
Sbjct: 145 KVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGL 204
Query: 211 SSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAAGE-------SLDSPA 263
++ + FL L++ F+G+ PS +AAA ++ + S +
Sbjct: 205 KNN---AHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNL 261
Query: 264 ICHQRLNEEMVRSCHQLMEEYLIDTCPSAQVKDQSEEPQ 302
+ L +E V++C+ L+ + +D Q++ QS + +
Sbjct: 262 LGVLNLTKEKVKTCYDLILQLPVDRI-GLQIQIQSSKKR 299
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 24/261 (9%)
Query: 58 DDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLS 117
DD +S LI ++ P D V R+ +++WI V ++Y F +TALL+
Sbjct: 58 DDELSTLISKQ-------EPCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLA 110
Query: 118 VNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTV 177
VNYFDRF++S W QL ++ACLSLAAK+EE +VP LLD Q+ + R+VFE KT+
Sbjct: 111 VNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTI 170
Query: 178 QRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVN 237
QRMEL V+S L+WR++ +TP + + I + S FL L++
Sbjct: 171 QRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQ---LEFLSRCESLLLSIIPDSR 227
Query: 238 FLGFAPSTIAAAAVLCAAGE-------SLDSPAICHQRLNEEMVRSCHQLMEEYLIDTCP 290
FL F+PS +A A ++ + S + +++ E V C++L ++D P
Sbjct: 228 FLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQLMTLLKVDSEKVNKCYEL----VLDHSP 283
Query: 291 SAQVKDQSEEPQVAPPSPVGV 311
S K + P SP+GV
Sbjct: 284 S---KKRMMNWMQQPASPIGV 301
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 4/156 (2%)
Query: 96 SINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANG--WPLQLLSVACLSLAAKME 153
+I+WIL + F+ TA ++++YFD FL F+ L W ++LLSVACLSLAAKME
Sbjct: 75 AIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKME 134
Query: 154 ETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSS 213
E VP L D FVF+P +++ EL ++S L+W++N ITPF Y +YF++K+ + +
Sbjct: 135 ERIVPGLSQYPQ-DHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKI-SQDN 192
Query: 214 EPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAA 249
S L SSD ++ T+ ++F + +AA
Sbjct: 193 HSVSKDLVLLRSSDSLLALTKEISFTEYRQFVVAAV 228
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 28/267 (10%)
Query: 92 ARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAK 151
AR + WI+ +A ++F TA ++V Y DRFL+ + W LQLLSVACLSLAAK
Sbjct: 99 ARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAK 158
Query: 152 MEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPAS 211
+EE + P L + ++ +++ ++ RMEL V++ L W++ + TPF YL+ F +K
Sbjct: 159 VEERRPPRLPEFKL----DMYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHD 214
Query: 212 SSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAAGE----SLDS----PA 263
+ + + + I + +V++ +G+ PSTIA AA+L A + +LD
Sbjct: 215 ERKA-----IVLRAIECIFASIKVISSVGYQPSTIALAAILIARNKETAPNLDELKSVVG 269
Query: 264 ICHQRLNEEMVRSCHQLMEEYLIDTCPSAQVKDQSEEPQVAPPSPVGVLDAAACGSCDTR 323
Q+L+ V SC+ M +++ + GV A GS D+
Sbjct: 270 SLWQQLDTGHVYSCYNKM-----------MIQEDRSMQSTTEVASSGVSVAHIGGSEDSA 318
Query: 324 SDNPGSSNQVEAELCAKRLRSSAPDVQ 350
++ +EA KR R +P Q
Sbjct: 319 MGGANNATTLEATPDKKRKRLHSPQRQ 345
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 70 ETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHF 129
E HM Y H + + ++ R +I+ I + P L+VNY DRFLSS
Sbjct: 35 EFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFD-DPSLTYLAVNYLDRFLSSED 93
Query: 130 LPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLN 189
+P + W L+L+S++C+SL+AKM + + + DL + + F F+ + ++RME ++ L
Sbjct: 94 MPQSKPWILKLISLSCVSLSAKMRKPDMS-VSDLPV-EGEF-FDAQMIERMENVILGALK 150
Query: 190 WRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWS-SSDLIIRTTRVVNFLGFAPSTIAA 248
WR+ S+TPF +L +FIS +P L S +SDL ++FL F PS IA
Sbjct: 151 WRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAG 210
Query: 249 AAVLCAAGE--SLDSPAICHQRLNEEMVRSCHQLMEEY 284
AA+L A+ E L P + R+N+ + +LME Y
Sbjct: 211 AALLFASFELCPLQFPCFSN-RINQCTYVNKDELMECY 247
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 89 FVTARQDSINWILNVHANYKFRPVTALLSVNYFDRF-LSSHFLPLANGWPLQLLSVACLS 147
F AR ++ WIL + F TA L++ YFDRF L A W +LLS+AC+S
Sbjct: 96 FRQARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVS 155
Query: 148 LAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISK 207
+AAKMEE Q P L + R VF +++RMEL V+S L WR+ ++TPFD+L F S+
Sbjct: 156 VAAKMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSR 214
Query: 208 L 208
L
Sbjct: 215 L 215
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 89 FVTARQDSINWILNVHANYKFRPVTALLSVNYFDRF-----LSSHFLPLANGWPLQLLSV 143
F AR+ ++ WIL + F TA L++ YFDRF + +P W +LL+V
Sbjct: 105 FALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMP----WAARLLAV 160
Query: 144 ACLSLAAKMEETQVPLLLDLQ--IFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYL 201
AC+SLAAKMEE + P L + + + D + F ++RMEL V+S L+WR+ ++TPFDYL
Sbjct: 161 ACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYL 220
Query: 202 HYFISKL 208
S+L
Sbjct: 221 PCLSSRL 227
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 101 LNVHANYKFRPVTALLSVNYFDRFLSSHFLPLA-NGWPLQLLSVACLSLAAKMEETQVPL 159
L+VH P A L++NY DR+LS L N W +LL+++CL+LAAKM+
Sbjct: 72 LDVH------PRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAIS 125
Query: 160 LLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFT 219
D+Q + F+F+ +QRME V++ L WR S+TP +L +F+S P
Sbjct: 126 AADIQRGE-EFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLD 184
Query: 220 RFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAAGESLDSPAICHQR-------LNEE 272
+ DL++R V F+PS AAAA+L AAGE + + + +N E
Sbjct: 185 AIKARAVDLLLRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFVNSE 244
Query: 273 MVRSCHQLM 281
+R C ++M
Sbjct: 245 KLRECGEVM 253
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 78/125 (62%), Gaps = 8/125 (6%)
Query: 90 VTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANG-WPLQLLSVACLSL 148
V+AR+ ++ W L A F +TA L+V Y DR L L + W +L +VAC++L
Sbjct: 75 VSAREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVAL 134
Query: 149 AAKMEETQVPLLLDLQI-----FDPR--FVFEPKTVQRMELRVMSVLNWRLNSITPFDYL 201
AAK+EET+VP+LLDLQ+ DP +VFE KTV+RMEL V+S L WR++ +TP YL
Sbjct: 135 AAKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYL 194
Query: 202 HYFIS 206
+
Sbjct: 195 QPLLG 199
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 93 RQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKM 152
R+ W+L V K L++NY DRFLS PL W LQLL C+ LA+KM
Sbjct: 55 RKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVE--PLRKSW-LQLLGATCMFLASKM 111
Query: 153 EETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASS 212
+ET +PL + P + MELRV++ L W L S+TP D++ +F++K+P +
Sbjct: 112 KET-IPLTAEKLCIYTDNSIRPDELLIMELRVLNKLKWDLASVTPHDFIEHFLNKMPLTE 170
Query: 213 SEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAA 255
+ + + VNF+ PS IAA +V A
Sbjct: 171 DTKQIIRKH---AQTFVALCATDVNFISNPPSMIAAGSVAAAV 210
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 68 ESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSS 127
++E +++ P+Y + + R+ W+L V K L++NY DRFLS
Sbjct: 33 KAEENYLPSPNYFKCVQK-EIVPKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS- 90
Query: 128 HFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLD-LQIFDPRFVFEPKTVQRMELRVMS 186
+ LQLL C+ LA+KM+ET VPL + L I+ V P + +MEL ++
Sbjct: 91 --VEPTKKTRLQLLGATCMFLASKMKET-VPLTAEKLCIYTDNSV-RPGELLQMELLALN 146
Query: 187 VLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTI 246
L W L S+TP D++ +F++KLP S + + + VNF+ PS I
Sbjct: 147 KLKWDLASVTPHDFIEHFLAKLPIHQSSKQILRKH---AQTFVALCATDVNFIASPPSMI 203
Query: 247 AAAAVLCAA-GESLDSPAICHQ------------RLNEEMVRSCHQLMEEYLIDTCPSAQ 293
AA +V A G L S C R + + +RSC + +E L + AQ
Sbjct: 204 AAGSVAAAVQGLYLKSTDSCLSSQNLTNFLSQVIRSDPDCLRSCQEQIESLLESSLRQAQ 263
Query: 294 VKDQSEEPQV 303
+E +V
Sbjct: 264 QHISTETKRV 273
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 67 RESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLS 126
RE+E + PDY+ D + R I+W++ VH ++ T L+VN DRFL
Sbjct: 163 RENEEMSCVQPDYMSSQGD--INEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLE 220
Query: 127 SHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMS 186
+P LQL+ V + LA K EE VP++ DL + R + + ME +++
Sbjct: 221 KQVVPRKK---LQLVGVTAMLLACKYEEVAVPVVEDLVLISDR-AYTKGQILEMEKLILN 276
Query: 187 VLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTI 246
L + ++ TP+ ++ F+ A S + F L+ L + PS +
Sbjct: 277 TLQFNMSVPTPYVFMRRFLK--AAQSDKQLQLLSFFILELSLV-----EYQMLKYRPSLL 329
Query: 247 AAAAVL---CAAGESLDSPAIC--HQRLNEEMVRSCHQLMEEY 284
AAAAV CA C H R E + C ++M ++
Sbjct: 330 AAAAVYTAQCALTRCQQWTKTCELHSRYTGEQLLECSRMMVDF 372
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 67 RESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLS 126
RE+E + PDY+ D + R I+W++ VH ++ T L+VN DRFL
Sbjct: 163 RENEEMSCVQPDYMSSQGD--INEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLE 220
Query: 127 SHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMS 186
+P LQL+ V + LA K EE VP++ DL + R + + ME +++
Sbjct: 221 KQVVPRKK---LQLVGVTAMLLACKYEEVAVPVVEDLVLISDR-AYTKGQILEMEKLILN 276
Query: 187 VLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTI 246
L + ++ TP+ ++ F+ A S + F L+ L + PS +
Sbjct: 277 TLQFNMSVPTPYVFMRRFLK--AAQSDKQLQLLSFFILELSLV-----EYQMLKYRPSLL 329
Query: 247 AAAAVL---CAAGESLDSPAIC--HQRLNEEMVRSCHQLMEEY 284
AAAAV CA C H R E + C ++M ++
Sbjct: 330 AAAAVYTAQCALTRCQQWTKTCELHSRYTGEQLLECSRMMVDF 372
>sp|Q147G5|CCA22_ARATH Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=2 SV=1
Length = 436
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 93 RQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKM 152
R+ I+W++ V +YK P T L+VN DRFLS+ ++ LQLL V+C+ +A+K
Sbjct: 206 RKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQR---LQLLGVSCMLIASKY 262
Query: 153 EETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASS 212
EE P + + P+ V ME+++++ +++RL+ T +L FI AS
Sbjct: 263 EELSAPGVEEFCFITANTYTRPE-VLSMEIQILNFVHFRLSVPTTKTFLRRFIKAAQASY 321
Query: 213 SEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAAGESLD------SPAICH 266
P F + ++ L T +FL F PS IAA+AV A +LD +P + H
Sbjct: 322 KVP--FIELEYLANYLAELTLVEYSFLRFLPSLIAASAVFLARW-TLDQTDHPWNPTLQH 378
Query: 267 -QRLNEEMVRSCHQLMEEYLIDT--CPSAQVKDQSEEPQ 302
R +++ ME+ ++T C A +++ +P+
Sbjct: 379 YTRYEVAELKNTVLAMEDLQLNTSGCTLAATREKYNQPK 417
>sp|Q5SCB5|CCND_OSTTA Cyclin-D OS=Ostreococcus tauri GN=CycD PE=3 SV=1
Length = 374
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 41 IFHNQSPAFDVVDDADAD-DVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINW 99
++ +++PA D + DV L+ RE ETH D C+ R + W
Sbjct: 59 LWTHRTPALHDPDSQETQLDVAKGLLARERETHGSFVFD-ARAAHHCAF----RSQLVEW 113
Query: 100 ILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQ--V 157
IL+V A +F P TA +++ Y DR LS +P + L L+++ CL +A K EE + V
Sbjct: 114 ILDVCAGERFGPTTADVAIAYTDRVLSKTVVPKTS---LHLVALCCLHIAVKYEEIEERV 170
Query: 158 PLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFIS 206
P + L+ + ++ P+ +++MEL V+ L W L +TP +L F++
Sbjct: 171 PTMSKLRSWTSN-MYSPEIIRKMELAVLIELGWDLGVLTPAHFLESFLA 218
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 57 ADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALL 116
A D+ L RE+ET D++ + V + R I+W++ V Y+ P T L
Sbjct: 211 ASDIYMHL--REAETRKRPSTDFMETIQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYL 267
Query: 117 SVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKT 176
+VNY DR+LS + + N LQLL VAC+ +AAK EE P + + F +
Sbjct: 268 TVNYIDRYLSGNEI---NRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEV 324
Query: 177 VQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRV- 235
++ ME V++ L + + + T +L F+ S +P FL ++ + + +
Sbjct: 325 LE-MEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFL---ANYVAELSLLE 380
Query: 236 VNFLGFAPSTIAAAAVLCA 254
N L + PS +AA+A+ A
Sbjct: 381 YNLLSYPPSLVAASAIFLA 399
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 57 ADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALL 116
A D+ L RE+ET D++ + V + R I+W++ V Y+ P T L
Sbjct: 241 ASDIYMHL--REAETRKRPSTDFMETIQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYL 297
Query: 117 SVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKT 176
+VNY DR+LS + + N LQLL VAC+ +AAK EE P + + F +
Sbjct: 298 TVNYIDRYLSGNEI---NRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEV 354
Query: 177 VQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRV- 235
++ ME V++ L + + + T +L F+ S +P FL ++ + + +
Sbjct: 355 LE-MEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFL---ANYVAELSLLE 410
Query: 236 VNFLGFAPSTIAAAAVLCA 254
N L + PS +AA+A+ A
Sbjct: 411 YNLLSYPPSLVAASAIFLA 429
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 93 RQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKM 152
R+ W+L V K L++NY DRFLS F PL LQLL C+ +A+KM
Sbjct: 57 RKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS--FEPLKKSR-LQLLGATCMFVASKM 113
Query: 153 EETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASS 212
+ET +PL + P + +MEL +++ L W L ++TP D++ +F++K+P +
Sbjct: 114 KET-IPLTAEKLCIYTDNSIRPDELLQMELLLVNKLKWNLAAMTPHDFIEHFLTKMPLAE 172
Query: 213 SEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAA 255
+ + + V F+ PS IAA +V+ A
Sbjct: 173 DTKQIIRK---HAQTFVALCATDVKFISNPPSMIAAGSVVAAV 212
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 57 ADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALL 116
A D+ L RE+ET D++ + V + R I+W++ V Y+ P T L
Sbjct: 224 ASDIYMHL--REAETRKHPSTDFMETLQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYL 280
Query: 117 SVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKT 176
+VNY DR+LS + + N LQLL VAC+ +AAK +E P + + F +
Sbjct: 281 TVNYIDRYLSGNEI---NRQRLQLLGVACMLIAAKYKEICAPQVEEFCYITDNTYFRDEV 337
Query: 177 VQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRV- 235
++ ME V++ L + + + T +L F+ S +P FL ++ + + +
Sbjct: 338 LE-MEASVLNYLKFEMTAPTAKCFLRRFVRVAQVSDEDPALHLEFL---ANYVAELSLLE 393
Query: 236 VNFLGFAPSTIAAAAVLCA 254
N L + PS +AA+A+ A
Sbjct: 394 YNLLSYPPSLVAASAIFLA 412
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 91 TARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAA 150
T R I+W++ V YK T L+VN DRF+S +++ LQLL + C+ +A+
Sbjct: 211 TMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIE---KQKLQLLGITCMLIAS 267
Query: 151 KMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPA 210
K EE P L + F + V ME++V++ L++RL+ T +L FI A
Sbjct: 268 KYEEISAPRLEEF-CFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQA 326
Query: 211 SSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCA 254
S P +L + + T FL F PS IAA+AV A
Sbjct: 327 SDKVPLIEMEYLANYFAELTLTE--YTFLRFLPSLIAASAVFLA 368
>sp|P24861|CCNA_PATVU G2/mitotic-specific cyclin-A OS=Patella vulgata PE=2 SV=1
Length = 426
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 57 ADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALL 116
A+D+ L RE+E+ H P Y+ + D + + R ++W++ V YK T L
Sbjct: 172 AEDIYKHL--REAESRHRSKPGYMKKQPDITN--SMRSILVDWMVEVSEEYKLHRETLFL 227
Query: 117 SVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKT 176
++NY DRFLS + + G LQL+ A + +A+K EE P + + ++ +E K
Sbjct: 228 AINYIDRFLSQ--MSVLRG-KLQLVGAASMFIASKYEEIYPPEVSEF-VYITDDTYEQKQ 283
Query: 177 VQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVV 236
V RME ++ VL++ + T ++ +K+ + S + +L S+L +
Sbjct: 284 VLRMEHLILKVLSFDVAQPT-INWFTDTYAKMADTDETTKSLSMYL---SELTL--VDAD 337
Query: 237 NFLGFAPSTIAAAAVLCAAGESLDS 261
+L + PSTIAAA+ LC A +L S
Sbjct: 338 PYLKYLPSTIAAAS-LCLANITLGS 361
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 113 TALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPR-FV 171
TA + NY DRFLS + W ++++SV CLSLA K++E +P L DLQ+ +
Sbjct: 105 TAFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIPSLHDLQMEEAMGHS 164
Query: 172 FEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIR 231
F T++ MEL ++ L WRL +TPF +L + + L++R
Sbjct: 165 FRASTIRDMELTLLKALRWRLACVTPFSFLPVTTTTTTTRA---------------LLLR 209
Query: 232 TTRVVNFLGFAPSTIAAAAVLCAAGESLDSPAICHQRL------NEEMVRSCHQLMEEYL 285
+ +FL F S +AA+A+ ++ + RL + V+ C +M+
Sbjct: 210 SLLDPSFLRFDASLLAASALTLSSTTPQHPNHLLLNRLIHPFSQTDHEVKECFNMMKALH 269
Query: 286 IDTCPSAQVKDQSEEPQVAPPSPV 309
+D S S+ P +P S V
Sbjct: 270 LDM--SKNPGRSSDHPCWSPISVV 291
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 26/258 (10%)
Query: 57 ADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALL 116
A D+ + L ++SE + +Y+ + D + + R I+W++ V YK P T L
Sbjct: 166 AQDIHNYL--KKSEAKYRPKSNYMRKQTD--INSSMRAILIDWLVEVSEEYKLIPQTLYL 221
Query: 117 SVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKT 176
SV+Y DRFLS + + G LQL+ AC+ +AAK EE P + + ++ + K
Sbjct: 222 SVSYIDRFLSH--MSVLRG-KLQLVGAACMLVAAKFEEIYPPEVAEF-VYITDDTYTAKQ 277
Query: 177 VQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSS-SDLIIRTTRV 235
V RME ++ L + L+ T D+L + L A++++P S ++L S+L + +
Sbjct: 278 VLRMEHLILKTLAFDLSVPTCRDFLSRY---LFAANAKPESQLKYLAEYLSELTLINCDI 334
Query: 236 VNFLGFAPSTIAAAAVLCAAGESLDS----PAI-CHQRLNEEMVRSCHQLMEEYLI---- 286
+ +APS IAA+++ C A L+S P + + N + +RSC L E +L+
Sbjct: 335 S--VKYAPSMIAASSI-CVANHMLNSIPWTPTLEFYSGYNIQDLRSC--LNEIHLLHLAA 389
Query: 287 DTCPSAQVKDQSEEPQVA 304
T P ++ + + P+
Sbjct: 390 STNPQQAIQQKYKSPKFG 407
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 67 RESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLS 126
R SE + DY+ R + S+ + R I+W++ V Y+ P T L+VNY DR+L+
Sbjct: 187 RVSEVNKRPALDYMERTQS-SINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLT 245
Query: 127 SHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDL-QIFDPRFVFEPKTVQRMELRVM 185
+ + N LQLL V C+ +AAK EE VP + D I D ++ + ME V+
Sbjct: 246 GNAI---NKQNLQLLGVTCMMIAAKYEEVCVPQVEDFCYITDNTYLR--NELLEMESSVL 300
Query: 186 SVLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPST 245
+ L + L + T +L F+ P + L + L + L +APS
Sbjct: 301 NYLKFELTTPTAKCFLRRFLRAAQGRKEVPSLLSECL--ACYLTELSLLDYAMLRYAPSL 358
Query: 246 IAAAAVLCA 254
+AA+AV A
Sbjct: 359 VAASAVFLA 367
>sp|P42524|CCNB_DICDI G2/mitotic-specific cyclin-B OS=Dictyostelium discoideum GN=cycB
PE=1 SV=1
Length = 436
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 67 RESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLS 126
RE E + DY+ + R ++W++ VH +K T LSVN DR+L+
Sbjct: 194 REKEQIDKIDKDYIKN--QYHINERMRAILVDWMMAVHVRFKLLSETFFLSVNIVDRYLA 251
Query: 127 SHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMS 186
+P+ LQL+ + + LA K EE P + D + V ME +++S
Sbjct: 252 KVMIPVT---KLQLVGITAILLACKYEEIYSPQIKDF-VHTSDDACTHAEVIDMERQILS 307
Query: 187 VLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTI 246
L + ++ TP +L F SK S S S +++L S+L + R+V F+ PS I
Sbjct: 308 TLQFHMSVATPLHFLRRF-SKAAGSDSRTHSLSKYL---SELSMVEYRMVQFV---PSMI 360
Query: 247 AAAAVLCAAGESLDS 261
AAA++ A ++ S
Sbjct: 361 AAASIYVARRMTMKS 375
>sp|P30284|CG21_EMENI G2/mitotic-specific cyclin-B OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nimE
PE=2 SV=1
Length = 478
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 50 DVVDDADADDV---------VSRLID--RESETHHMLHPDYLHRFRDCSVFVTARQDSIN 98
D V D D +D+ V + D RE E + +PDY+ D + R ++
Sbjct: 189 DFVADLDTEDLDDPLMAAEYVVEIFDYLRELEMETLPNPDYIDHQPDLEWKM--RGILVD 246
Query: 99 WILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVP 158
W++ VH ++ P T L+VN DRFLS+ + L LQL+ VA + +A+K EE P
Sbjct: 247 WLIEVHTRFRLLPETLFLAVNIIDRFLSAEVVALDR---LQLVGVAAMFIASKYEEVLSP 303
Query: 159 LLLDL-QIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPGS 217
+ + + D F K + E +++ L + ++ P ++L ISK + +
Sbjct: 304 HVANFSHVADE--TFSDKEILDAERHILATLEYNMSYPNPMNFLRR-ISKADNYDIQTRT 360
Query: 218 FTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAA----GESLDSPAICHQRLNEEM 273
++L S L R FLG+ S I AAA+ A D+ + EE
Sbjct: 361 LGKYLMEISLLDHR------FLGYPQSQIGAAAMYLARLILDRGPWDATLAHYAGYTEEE 414
Query: 274 VRSCHQLMEEYL 285
+ +LM +YL
Sbjct: 415 IDEVFRLMVDYL 426
>sp|P25322|CCND1_MOUSE G1/S-specific cyclin-D1 OS=Mus musculus GN=Ccnd1 PE=1 SV=1
Length = 295
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 8/171 (4%)
Query: 93 RQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKM 152
R+ W+L V K L++NY DRFLS PL LQLL C+ +A+KM
Sbjct: 57 RKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLE--PLKKSR-LQLLGATCMFVASKM 113
Query: 153 EETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASS 212
+ET +PL + P+ + +MEL +++ L W L ++TP D++ +F+SK+P +
Sbjct: 114 KET-IPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAD 172
Query: 213 SEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAA-GESLDSP 262
+ + + + V F+ PS +AA +V+ A G +L SP
Sbjct: 173 ENKQTIRK---HAQTFVALCATDVKFISNPPSMVAAGSVVAAMQGLNLGSP 220
>sp|Q39067|CCB12_ARATH Cyclin-B1-2 OS=Arabidopsis thaliana GN=CYCB1-2 PE=1 SV=2
Length = 445
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 131/317 (41%), Gaps = 36/317 (11%)
Query: 12 SSLYCGEEDAAAAADGGSDMVSCDTTDTWIFHNQSPAFDVVDDADADDVVSRLIDRESET 71
SS+ AA ++ D +D N A + VDD + + +++ES+
Sbjct: 146 SSVLSARSKAACGIVNKPKIIDIDESDK---DNHLAAVEYVDDMYS---FYKEVEKESQP 199
Query: 72 HHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLP 131
+H + R I+W+L VH ++ T L+VN DRFLS +P
Sbjct: 200 KMYMHIQ-------TEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAVP 252
Query: 132 LANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWR 191
LQL+ ++ L +A+K EE P + DL ++ + + + ME ++ L W
Sbjct: 253 KRE---LQLVGISALLIASKYEEIWPPQVNDL-VYVTDNAYSSRQILVMEKAILGNLEWY 308
Query: 192 LNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAV 251
L T + +L FI K S E + FL + T L F PS +AA+AV
Sbjct: 309 LTVPTQYVFLVRFI-KASMSDPEMENMVHFLAELGMMHYDT------LTFCPSMLAASAV 361
Query: 252 LCAAGESLDSPAIC-----HQRLNEEMVRSCHQLMEEYLIDTCPSAQVK------DQSEE 300
A SPA H E + C +L+ +L C ++++ ++E
Sbjct: 362 YTARCSLNKSPAWTDTLQFHTGYTESEIMDCSKLL-AFLHSRCGESRLRAVYKKYSKAEN 420
Query: 301 PQVAPPSPVGVLDAAAC 317
VA SP L +AA
Sbjct: 421 GGVAMVSPAKSLLSAAA 437
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 86 CSVFVTARQD--------SINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWP 137
CS F ++D W+L V K L++NY DRFL+ P +
Sbjct: 41 CSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAINYLDRFLAGVPTPKTH--- 97
Query: 138 LQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITP 197
LQLL C+ LA+K++ET +PL + +P+ + EL V+ L W L ++TP
Sbjct: 98 LQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTP 156
Query: 198 FDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAV 251
D++ + + KLP SE S R + I F + PS IA +V
Sbjct: 157 HDFIEHILRKLP-QPSEKLSLIR--KHAQTFIALCATDFKFAMYPPSMIATGSV 207
>sp|Q0D9C7|CCB22_ORYSJ Cyclin-B2-2 OS=Oryza sativa subsp. japonica GN=CYCB2-2 PE=1 SV=1
Length = 419
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 67 RESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLS 126
R SE + P+Y+ D + R I+W++ VH + T L+VN DRFL+
Sbjct: 171 RRSEGLSCVSPNYMLSQND--INEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLA 228
Query: 127 SHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMS 186
+ LQL+ V + LA K EE VP++ DL + R + + ME +++
Sbjct: 229 RENVVRKK---LQLVGVTAMLLACKYEEVSVPVVEDLILICDR-AYTRTDILEMERMIVN 284
Query: 187 VLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRV-VNFLGFAPST 245
L + ++ TP+ ++ F L A+ S+ + L S II + V L F PS
Sbjct: 285 TLQFDMSVPTPYCFMRRF---LKAAQSD-----KKLELMSFFIIELSLVEYEMLKFQPSM 336
Query: 246 IAAAAVLCA-----AGESLDSPAICHQRLNEEMVRSCHQLMEE 283
+AAAA+ A +S + H + +EE + C ++M E
Sbjct: 337 LAAAAIYTAQCTINGFKSWNKCCELHTKYSEEQLMECSKMMVE 379
>sp|A2YH60|CCB22_ORYSI Cyclin-B2-2 OS=Oryza sativa subsp. indica GN=CYCB2-2 PE=1 SV=2
Length = 419
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 67 RESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLS 126
R SE + P+Y+ D + R I+W++ VH + T L+VN DRFL+
Sbjct: 171 RRSEGLSCVSPNYMLSQND--INEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLA 228
Query: 127 SHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMS 186
+ LQL+ V + LA K EE VP++ DL + R + + ME +++
Sbjct: 229 RENVVRKK---LQLVGVTAMLLACKYEEVSVPVVEDLILICDR-AYTRTDILEMERMIVN 284
Query: 187 VLNWRLNSITPFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRV-VNFLGFAPST 245
L + ++ TP+ ++ F L A+ S+ + L S II + V L F PS
Sbjct: 285 TLQFDMSVPTPYCFMRRF---LKAAQSD-----KKLELMSFFIIELSLVEYEMLKFQPSM 336
Query: 246 IAAAAVLCA-----AGESLDSPAICHQRLNEEMVRSCHQLMEE 283
+AAAA+ A +S + H + +EE + C ++M E
Sbjct: 337 LAAAAIYTAQCTINGFKSWNKCCELHTKYSEEQLMECSKMMVE 379
>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
Length = 288
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 86 CSVFVTARQD--------SINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWP 137
CS F ++D W+L V K L++NY DRFL+ P +
Sbjct: 40 CSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKTH--- 96
Query: 138 LQLLSVACLSLAAKMEETQVPLLLD-LQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSIT 196
LQLL C+ LA+K++ET +PL + L I+ V +P+ + EL V+ L W L ++T
Sbjct: 97 LQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSV-KPQELLEWELVVLGKLKWNLAAVT 154
Query: 197 PFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAV---LC 253
P D++ + + KLP E S R + I F + PS IA +V +C
Sbjct: 155 PHDFIEHILRKLP-QQKEKLSLIR--KHAQTFIALCATDFKFAMYPPSMIATGSVGAAIC 211
Query: 254 AAGESLDSPAICHQRLNEEMVRSCH 278
+ + A+ L E + + H
Sbjct: 212 GLQQDEEVNALTCDALTELLTKITH 236
>sp|P39948|CCND1_RAT G1/S-specific cyclin-D1 OS=Rattus norvegicus GN=Ccnd1 PE=2 SV=1
Length = 295
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 93 RQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKM 152
R+ W+L V K L++NY DRFLS PL LQLL C+ +A+KM
Sbjct: 57 RKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLE--PLKKSR-LQLLGATCMFVASKM 113
Query: 153 EETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASS 212
+ET +PL + P+ + +MEL +++ L W L ++TP D++ +F+SK+P +
Sbjct: 114 KET-IPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAD 172
Query: 213 SEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAA-GESLDSP 262
+ + + V F+ PS +AA +V+ A G +L SP
Sbjct: 173 ENKQIIRK---HAQTFVALCATDVKFISNPPSMVAAGSVVAAMQGLNLGSP 220
>sp|Q2QQ96|CCA21_ORYSJ Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1
Length = 490
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 97 INWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQ 156
I+W++ V YK P T L++N DRFLS H++ LQLL + + +A+K EE
Sbjct: 265 IDWLVEVSEEYKLVPDTLYLTINLIDRFLSQHYI---ERQKLQLLGITSMLIASKYEEIC 321
Query: 157 VPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSSEPG 216
P + + F + V +ME V++ + + L+ T +L F+ AS + P
Sbjct: 322 APRVEEF-CFITDNTYTKAEVLKMEGLVLNDMGFHLSVPTTKTFLRRFLRAAQASRNVPS 380
Query: 217 SFTRFLWSSSDLIIRTTRV-VNFLGFAPSTIAAAAVLCA 254
+L ++ + T + +FL F PS +AA+AV A
Sbjct: 381 ITLGYL---ANYLAELTLIDYSFLKFLPSVVAASAVFLA 416
>sp|P24860|CCNB1_MOUSE G2/mitotic-specific cyclin-B1 OS=Mus musculus GN=Ccnb1 PE=2 SV=3
Length = 430
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 30/249 (12%)
Query: 33 SCDTTDTWIFHNQSPAFDVVDDADADD-----VVSRLID------RESETHHMLHPDYLH 81
C + ++ S V D DADD + S + R+ E + P YL
Sbjct: 131 GCAPAEEYLCQAFSDVILAVSDVDADDGADPNLCSEYVKDIYAYLRQLEEEQSVRPKYL- 189
Query: 82 RFRDCSVFVTARQDSINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLL 141
+ V R I+W++ V ++ T ++V+ DRF+ + +P LQL+
Sbjct: 190 --QGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNSCVPKKM---LQLV 244
Query: 142 SVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYL 201
V + +A+K EE P + D F + +++ME++++ VLN+ L P +L
Sbjct: 245 GVTAMFIASKYEEMYPPEIGDFA-FVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFL 303
Query: 202 HYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAVLCAAGESLD- 260
SK+ E + ++L S L + + FAPS IAA A C A + LD
Sbjct: 304 RR-ASKVGEVDVEQHTLAKYLMELSMLDY------DMVHFAPSQIAAGA-FCLALKILDN 355
Query: 261 ---SPAICH 266
+P + H
Sbjct: 356 GEWTPTLQH 364
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 86 CSVFVTARQD--------SINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWP 137
CS F ++D W+L V K L++NY DRFL+ P +
Sbjct: 41 CSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAINYLDRFLAGVPTPKTH--- 97
Query: 138 LQLLSVACLSLAAKMEETQVPLLLDLQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSITP 197
LQLL C+ LA+K++ET +PL + +P+ + EL V+ L W L ++TP
Sbjct: 98 LQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTP 156
Query: 198 FDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAV 251
D++ + + KLP +E S R + I F + PS IA +V
Sbjct: 157 HDFIEHILRKLP-QPNEKLSLIR--KHAQTFIALCATDFKFAMYPPSMIATGSV 207
>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
Length = 289
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 86 CSVFVTARQD--------SINWILNVHANYKFRPVTALLSVNYFDRFLSSHFLPLANGWP 137
CS F ++D W+L V K L++NY DRFL+ P +
Sbjct: 40 CSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKTH--- 96
Query: 138 LQLLSVACLSLAAKMEETQVPLLLD-LQIFDPRFVFEPKTVQRMELRVMSVLNWRLNSIT 196
LQLL C+ LA+K++ET +PL + L I+ V +P+ + EL V+ L W L ++T
Sbjct: 97 LQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSV-KPQELLEWELVVLGKLKWNLAAVT 154
Query: 197 PFDYLHYFISKLPASSSEPGSFTRFLWSSSDLIIRTTRVVNFLGFAPSTIAAAAV 251
P D++ + + KLP E S R + I F + PS IA +V
Sbjct: 155 PHDFIEHILRKLP-QQKEKLSLIR--KHAQTFIALCATDFKFAMYPPSMIATGSV 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,164,309
Number of Sequences: 539616
Number of extensions: 5143046
Number of successful extensions: 12800
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 12478
Number of HSP's gapped (non-prelim): 247
length of query: 352
length of database: 191,569,459
effective HSP length: 118
effective length of query: 234
effective length of database: 127,894,771
effective search space: 29927376414
effective search space used: 29927376414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)