Query 018658
Match_columns 352
No_of_seqs 21 out of 23
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 04:04:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018658.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018658hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1icha_ a.77.1.2 (A:) Tumor ne 67.1 2.3 0.00017 29.7 3.5 34 211-244 2-35 (87)
2 d1wjta_ a.48.3.1 (A:) Transcri 36.4 17 0.0012 27.0 4.0 57 186-243 9-75 (103)
3 d3efza1 a.118.7.1 (A:46-268) 1 31.3 11 0.00081 31.7 2.4 42 196-251 1-42 (223)
4 d1cuna2 a.7.1.1 (A:116-219) Sp 26.8 40 0.0029 22.6 4.3 18 109-126 1-18 (104)
5 d2efla1 a.238.1.4 (A:1-288) Fo 22.0 1.5E+02 0.011 22.2 20.0 56 73-128 107-162 (288)
6 d1hcia1 a.7.1.1 (A:272-396) al 19.9 1.4E+02 0.01 21.9 6.6 82 110-194 38-125 (125)
7 d1kyza1 a.4.5.29 (A:13-119) Ca 19.8 34 0.0025 25.6 3.0 41 193-233 27-73 (107)
8 d1s35a1 a.7.1.1 (A:1063-1168) 19.3 76 0.0055 20.9 4.5 19 109-127 3-21 (106)
9 d2efka1 a.238.1.4 (A:10-288) C 19.2 1.7E+02 0.013 21.8 20.4 53 73-125 98-150 (279)
10 d2p90a1 c.56.8.1 (A:6-274) Hyp 18.9 62 0.0045 26.1 4.7 46 225-282 213-258 (269)
No 1
>d1icha_ a.77.1.2 (A:) Tumor necrosis factor receptor-1 death domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.09 E-value=2.3 Score=29.74 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=30.6
Q ss_pred hhHHHhhhccCchhHHhhhhhhhcchhHhhhhhh
Q 018658 211 CELRKLLDEVSPKNFERINKLLVVKDEEIHKLKD 244 (352)
Q Consensus 211 ~El~kil~evspknfe~in~lL~~kD~eIakLrd 244 (352)
.||..|-++|+|.++..+-.-|.+.+.+|..+..
T Consensus 2 ~~l~~va~~v~~~~Wk~lar~LGls~~~i~~I~~ 35 (87)
T d1icha_ 2 ATLYAVVENVPPLRWKEFVKRLGLSDHEIDRLEL 35 (87)
T ss_dssp HHHHHHHHHSCSTTHHHHHHHHTCCHHHHHHHHH
T ss_pred hHHHHHHHHCChHHHHHHHHHhCcCHHHHHHHHH
Confidence 4788999999999999999999999999977654
No 2
>d1wjta_ a.48.3.1 (A:) Transcription elongation factor S-II protein 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.37 E-value=17 Score=26.99 Aligned_cols=57 Identities=19% Similarity=0.349 Sum_probs=40.3
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCcchhhHHHhhhccCchhHHh---------hhhhhh-cchhHhhhhh
Q 018658 186 QLKDEVFRIEQDIMQTIAKAGVNKDCELRKLLDEVSPKNFER---------INKLLV-VKDEEIHKLK 243 (352)
Q Consensus 186 QLKDeVlRIE~dIm~A~akag~~~~~El~kil~evspknfe~---------in~lL~-~kD~eIakLr 243 (352)
-+.|||.+|-..|.+++...-...-.++++.|+.+++ +++- +|+|.- ..|++|..+-
T Consensus 9 ~~eeei~~i~k~L~~~~~~~~~~~vl~~L~~L~~~~i-t~e~L~~T~IGk~Vn~LrK~~~~~~v~~lA 75 (103)
T d1wjta_ 9 GLEEELLRIAKKLEKMVSRKKTEGALDLLKKLNSCQM-SIQLLQTTRIGVAVNGVRKHCSDKEVVSLA 75 (103)
T ss_dssp CSHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHTSCC-CHHHHHHTCHHHHHHHHHHHCCCSHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHcCCC-CHHHHHhCCccHhHHHHHccCCCHHHHHHH
Confidence 3568999999999999977666677899999998776 5553 355443 2355555543
No 3
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]}
Probab=31.30 E-value=11 Score=31.71 Aligned_cols=42 Identities=19% Similarity=0.358 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCcchhhHHHhhhccCchhHHhhhhhhhcchhHhhhhhhHHHHHhh
Q 018658 196 QDIMQTIAKAGVNKDCELRKLLDEVSPKNFERINKLLVVKDEEIHKLKDEIKIMSA 251 (352)
Q Consensus 196 ~dIm~A~akag~~~~~El~kil~evspknfe~in~lL~~kD~eIakLrdeirimSa 251 (352)
.|+|.++...|..-++|.|++|+ |.=||. |...|.-+||+|.
T Consensus 1 ~d~~k~~~e~~~~~~~eeRnLLs-vayKn~-------------ig~rR~s~R~i~s 42 (223)
T d3efza1 1 KDVIKVLTESSDFRDNSLILLLA-GSLRNR-------------VTSIRNSLKSIKS 42 (223)
T ss_dssp CHHHHHHTC-----CCHHHHHHH-HHHHHH-------------HHHHHHHHHHHHH
T ss_pred CcHHHHHHHcCCccchHHHHHHH-HHHhhh-------------ccchHHHHHHHHH
Confidence 48999999999999999999886 444543 6788999999987
No 4
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=26.77 E-value=40 Score=22.63 Aligned_cols=18 Identities=0% Similarity=0.185 Sum_probs=10.4
Q ss_pred HHHHHhhhhhhhhhHhHh
Q 018658 109 KYLMQLDGLRSQLAATKA 126 (352)
Q Consensus 109 k~l~eLd~lRsQLs~tqa 126 (352)
||..+++++-+-|.-+.+
T Consensus 1 qF~~~~~e~~~Wl~e~~~ 18 (104)
T d1cuna2 1 QFVANVEEEEAWINEKMT 18 (104)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 466666666666554433
No 5
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.04 E-value=1.5e+02 Score=22.17 Aligned_cols=56 Identities=20% Similarity=0.108 Sum_probs=43.7
Q ss_pred HHHHHhhhchHHHHHHHHHHHhhhhhhhhhhhccHHHHHHHhhhhhhhhhHhHhhh
Q 018658 73 QEAEMKAKNMEDEICKLQKTLEERNGRLQASACTAEKYLMQLDGLRSQLAATKATA 128 (352)
Q Consensus 73 k~AE~kak~ME~Ei~kLqK~Ledk~~QL~as~~stek~l~eLd~lRsQLs~tqaTA 128 (352)
+..+...|.+.+++.++++.+.+....+..+-..-.+-.+|++.++.++...+.-.
T Consensus 107 ~~~~~~~K~~~~~~~k~~k~~~~~~~~l~k~k~~Y~~~~~e~e~~~~~~~~~~~~~ 162 (288)
T d2efla1 107 QELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADI 162 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 55667778899999999999999888888777666666788888888877655433
No 6
>d1hcia1 a.7.1.1 (A:272-396) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.93 E-value=1.4e+02 Score=21.86 Aligned_cols=82 Identities=12% Similarity=0.103 Sum_probs=53.9
Q ss_pred HHHHhhhhhhhhhHhHhhhHhhHHhHHHHHHHHHHHhhhhhhhhcchh------hhhhHhhhhHHhHHhHHHHHhhhhhh
Q 018658 110 YLMQLDGLRSQLAATKATADASAASAQSAQLQCLALVKELDEKNSSLK------EHEDRVTRLGQQLDNLQKDLQARESS 183 (352)
Q Consensus 110 ~l~eLd~lRsQLs~tqaTAeaSA~SAqsaqlqCl~L~keL~eK~~sLk------EhE~rV~~lgeQLd~LqkdLqARE~S 183 (352)
|-+-+.+++.+|..-..--...-.....-.-.+..+.+.|..|-.+.. ..+..+..|-.--++|.+-...|+-.
T Consensus 38 f~~t~~~iq~~l~~f~~yr~~ekp~~~~Ek~~l~~l~~~lqt~~~~~n~~~~~P~~gl~~~di~~~W~~L~~ae~~Re~~ 117 (125)
T d1hcia1 38 PEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEW 117 (125)
T ss_dssp CCSSSTTTTHHHHHHHHHHHHTHHHHHHHHHHTTTHHHHTTTTTTTTTSCCCCCCGGGCSSSHHHHHHHHHHHHTTHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 445677777777665543333233333444455677778777666654 34577888888889999888888765
Q ss_pred hHhhhHHHHHH
Q 018658 184 QKQLKDEVFRI 194 (352)
Q Consensus 184 qkQLKDeVlRI 194 (352)
|++|+.|+
T Consensus 118 ---L~~El~Rl 125 (125)
T d1hcia1 118 ---LLNEIRRL 125 (125)
T ss_dssp ---HHHHHHHH
T ss_pred ---HHHHHhcC
Confidence 77887774
No 7
>d1kyza1 a.4.5.29 (A:13-119) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=19.80 E-value=34 Score=25.61 Aligned_cols=41 Identities=24% Similarity=0.429 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhcCcchhhHHHhhhccCch------hHHhhhhhhh
Q 018658 193 RIEQDIMQTIAKAGVNKDCELRKLLDEVSPK------NFERINKLLV 233 (352)
Q Consensus 193 RIE~dIm~A~akag~~~~~El~kil~evspk------nfe~in~lL~ 233 (352)
-||-+|.|+|+++|.+.---...|...++++ +++||=++|+
T Consensus 27 AieLgI~DiI~~~G~~~~ls~~eia~~l~~~~p~~~~~L~RilR~La 73 (107)
T d1kyza1 27 ALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLA 73 (107)
T ss_dssp HHHTTHHHHHHTTCTTCCBCHHHHHHTSSCCCTTHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHcCCCCCCCHHHHHHhcCCCCCcchHHHHHHHHHHH
Confidence 4789999999999965543333455555433 3566655554
No 8
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.34 E-value=76 Score=20.93 Aligned_cols=19 Identities=26% Similarity=0.489 Sum_probs=13.2
Q ss_pred HHHHHhhhhhhhhhHhHhh
Q 018658 109 KYLMQLDGLRSQLAATKAT 127 (352)
Q Consensus 109 k~l~eLd~lRsQLs~tqaT 127 (352)
+|+.++++|-+=|..+...
T Consensus 3 ~F~~~~~~l~~Wl~~~e~~ 21 (106)
T d1s35a1 3 AFLQDLDDFQAWLSITQKA 21 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 5778888887777665543
No 9
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.24 E-value=1.7e+02 Score=21.77 Aligned_cols=53 Identities=19% Similarity=0.075 Sum_probs=40.2
Q ss_pred HHHHHhhhchHHHHHHHHHHHhhhhhhhhhhhccHHHHHHHhhhhhhhhhHhH
Q 018658 73 QEAEMKAKNMEDEICKLQKTLEERNGRLQASACTAEKYLMQLDGLRSQLAATK 125 (352)
Q Consensus 73 k~AE~kak~ME~Ei~kLqK~Ledk~~QL~as~~stek~l~eLd~lRsQLs~tq 125 (352)
+..+...|.+.+++.++++.+.+....+.-+-..-.+-..+++.++..+..+.
T Consensus 98 ~~~~~~~k~~~~~~~~~~k~l~~~~~~~~k~k~~y~~~~~e~e~~~~~~~~~~ 150 (279)
T d2efka1 98 QEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLD 150 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56677778889999999999998888777776666666677777776655443
No 10
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=18.92 E-value=62 Score=26.08 Aligned_cols=46 Identities=20% Similarity=0.260 Sum_probs=33.0
Q ss_pred HHhhhhhhhcchhHhhhhhhHHHHHhhhhhhhhHHHHHHHHHhHhhHHHHHHHHHHHH
Q 018658 225 FERINKLLVVKDEEIHKLKDEIKIMSAHWKLKTKELESQLEKQRRADQELKKRVLKLE 282 (352)
Q Consensus 225 fe~in~lL~~kD~eIakLrdeirimSaHW~~KTKELEsQlekqrR~dQELKKrVlKLE 282 (352)
.+.||+++.++= .+..|.++. .+.|.++++....++|+++=|-+||
T Consensus 213 L~~l~~~~gl~i-d~~~L~e~A-----------e~~e~~i~~l~e~~~e~~~~v~~LE 258 (269)
T d2p90a1 213 LQSIADSADLNL-PLLALERDA-----------EKVHRQLMEQTEESSEIQRVVGALE 258 (269)
T ss_dssp HHHHHHHHTCCC-CCHHHHHHH-----------HHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCC-ChHHHHHHH-----------HHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 456777776653 444555443 4567888888889999999888887
Done!