BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018665
(352 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/317 (44%), Positives = 194/317 (61%), Gaps = 15/317 (4%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
++NGL Y D ILV+NG KQSI +LA+ PGDEVIIPAPFWVSYPEM ++A+ TPVIL
Sbjct: 82 RDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVIL 141
Query: 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
PT + F + P+ + +T K++LL+ +PSNPTG VY + + IA+ VA L VL
Sbjct: 142 PTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQ-VAVEAGLWVL 200
Query: 148 SDEIYEHIIYAPATHTSF-ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 206
SDEIYE I+Y A H S A+ P +ER++ +GF+K +AMTGWR+G++AGP V A
Sbjct: 201 SDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAAT 260
Query: 207 KIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 266
KIQ TS + +Q + V +M+ AF ERR +++ + + G++ +
Sbjct: 261 KIQGHSTSNVCTFAQ---YGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPK 317
Query: 267 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 326
P GAFY+F + S S C LLD+ QVA VPG AFG D CIR+SYA
Sbjct: 318 PDGAFYMFPSIAKTGRS----------SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA 367
Query: 327 ASLTTLQAAVERIKKGL 343
L T++ +ER++K L
Sbjct: 368 TDLDTIKRGMERLEKFL 384
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 181/318 (56%), Gaps = 20/318 (6%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
+ENGLS TP++ +V+ G KQ++ A+ PGDEVI+ +P+WVSYPEM R A V +
Sbjct: 83 RENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV 142
Query: 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK +L+ +AR+ +H LV
Sbjct: 143 ETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV- 201
Query: 148 SDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
SDEIYEH++Y H S PG E TLTVNG +KAFAMTGWR+GY GPK + A
Sbjct: 202 SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAM 256
Query: 206 NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265
+ SQ T+ +I+Q V +A+R RRD L++ L G+K
Sbjct: 257 ASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV 315
Query: 266 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325
P GAFY+ +D S E + +E L +A VA+VPG F +R+SY
Sbjct: 316 RPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAGVAVVPGTDFAAFGHVRLSY 364
Query: 326 AASLTTLQAAVERIKKGL 343
A S L+ A+ER + L
Sbjct: 365 ATSEENLRKALERFARVL 382
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 180/318 (56%), Gaps = 20/318 (6%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
+ENGLS TP++ +V+ G KQ++ A+ PGDEVI+ +P+WVSYPEM R A V +
Sbjct: 83 RENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV 142
Query: 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK +L+ +AR+ +H LV
Sbjct: 143 ETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV- 201
Query: 148 SDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
SDEIYEH++Y H S PG E TLTVNG + AFAMTGWR+GY GPK + A
Sbjct: 202 SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAXAFAMTGWRIGYACGPKEVIKAM 256
Query: 206 NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265
+ SQ T+ +I+Q V +A+R RRD L++ L G+K
Sbjct: 257 ASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV 315
Query: 266 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325
P GAFY+ +D S E + +E L +A VA+VPG F +R+SY
Sbjct: 316 RPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAGVAVVPGTDFAAFGHVRLSY 364
Query: 326 AASLTTLQAAVERIKKGL 343
A S L+ A+ER + L
Sbjct: 365 ATSEENLRKALERFARVL 382
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 180/318 (56%), Gaps = 20/318 (6%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
+ENGLS TP++ +V+ G Q++ A+ PGDEVI+ +P+WVSYPEM R A V +
Sbjct: 83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV 142
Query: 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK +L+ +AR+ +H LV
Sbjct: 143 ETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV- 201
Query: 148 SDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
SDEIYEH++Y H S PG E TLTVNG +KAFAMTGWR+GY GPK + A
Sbjct: 202 SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAM 256
Query: 206 NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265
+ SQ T+ +I+Q V +A+R RRD L++ L G+K
Sbjct: 257 ASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV 315
Query: 266 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325
P GAFY+ +D S E + +E L +A VA+VPG F +R+SY
Sbjct: 316 RPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAGVAVVPGTDFAAFGHVRLSY 364
Query: 326 AASLTTLQAAVERIKKGL 343
A S L+ A+ER + L
Sbjct: 365 ATSEENLRKALERFARVL 382
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 179/318 (56%), Gaps = 20/318 (6%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
+ENGLS TP++ +V+ G Q++ A+ PGDEVI+ +P+WVSYPEM R A V +
Sbjct: 83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV 142
Query: 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK +L+ +AR+ +H LV
Sbjct: 143 ETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV- 201
Query: 148 SDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
SDEIYEH++Y H S PG E TLTVNG +KAFAMTGWR+GY GPK + A
Sbjct: 202 SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAM 256
Query: 206 NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265
+ Q T+ +I+Q V +A+R RRD L++ L G+K
Sbjct: 257 ASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV 315
Query: 266 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325
P GAFY+ +D S E + +E L +A VA+VPG F +R+SY
Sbjct: 316 RPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAGVAVVPGTDFAAFGHVRLSY 364
Query: 326 AASLTTLQAAVERIKKGL 343
A S L+ A+ER + L
Sbjct: 365 ATSEENLRKALERFARVL 382
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 179/318 (56%), Gaps = 20/318 (6%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
+ENGLS TP++ +V+ G Q++ A+ PGDEVI+ +P+WVSYPEM R A V +
Sbjct: 83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV 142
Query: 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK +L+ +AR+ +H LV
Sbjct: 143 ETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV- 201
Query: 148 SDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
SDEIYEH++Y H S PG E TLTVNG +KAFAMTGWR+GY GPK + A
Sbjct: 202 SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAM 256
Query: 206 NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265
+ Q T+ +I+Q V +A+R RRD L++ L G+K
Sbjct: 257 ASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV 315
Query: 266 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325
P GAFY+ +D S E + +E L +A VA+VPG F +R+SY
Sbjct: 316 RPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAGVAVVPGTDFAAFGHVRLSY 364
Query: 326 AASLTTLQAAVERIKKGL 343
A S L+ A+ER + L
Sbjct: 365 ATSEENLRKALERFARVL 382
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 179/318 (56%), Gaps = 20/318 (6%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
+ENGLS TP++ +V+ G Q++ A+ PGDEVI+ +P+WVSYPEM R A V +
Sbjct: 83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV 142
Query: 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
T E F+ DP+ + +T +++ L++ SP+NPTG+VYPK +L+ +AR+ +H LV
Sbjct: 143 ETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV- 201
Query: 148 SDEIYEHIIYAPATHTSFASLPGMW--ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
SDEIYEH++Y H S PG E TLTVNG +KAFAMTGWR+GY GPK + A
Sbjct: 202 SDEIYEHLLYE-GEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAM 256
Query: 206 NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265
+ Q T+ +I+Q V +A+R RRD L++ L G+K
Sbjct: 257 ASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV 315
Query: 266 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325
P GAFY+ +D S E + +E L +A VA+VPG F +R+SY
Sbjct: 316 RPSGAFYVLMDTSPIAPDE------VRAAERLL-----EAGVAVVPGTDFAAFGHVRLSY 364
Query: 326 AASLTTLQAAVERIKKGL 343
A S L+ A+ER + L
Sbjct: 365 ATSEENLRKALERFARVL 382
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 178/319 (55%), Gaps = 16/319 (5%)
Query: 28 KENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 86
K+NG+ P +I+V GA Q+ L + A G+EV+IP P +VSY +A PV
Sbjct: 77 KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 136
Query: 87 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 146
+PT + F L+ L+ +T+K+R LI+ SP NPTG+V K L+EIA V +H L+V
Sbjct: 137 VPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD-LIV 195
Query: 147 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 206
+SDE+YEH IY A H S ASL GM+ERT+TVNGFSK FAMTGWRLG++A P +
Sbjct: 196 ISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMV 255
Query: 207 KIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 266
K Q + + Q + V +M K + RR + K E+ G+ +
Sbjct: 256 KFQMYNATCPVTFIQ-YAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVK 313
Query: 267 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRIS 324
P+GAFY+F G S+ +L +A+VA+VPG AFG + +RIS
Sbjct: 314 PKGAFYIFPRIRD------TGL----TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRIS 363
Query: 325 YAASLTTLQAAVERIKKGL 343
YA + L+ A+ER+++ L
Sbjct: 364 YATAYEKLEEAMERMERVL 382
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 178/319 (55%), Gaps = 16/319 (5%)
Query: 28 KENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 86
K+NG+ P +I+V GA Q+ L + A G+EV+IP P +VSY +A PV
Sbjct: 78 KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 137
Query: 87 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 146
+PT + F L+ L+ +T+K+R LI+ SP NPTG+V K L+EIA V +H L+V
Sbjct: 138 VPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD-LIV 196
Query: 147 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 206
+SDE+YEH IY A H S ASL GM+ERT+TVNGFSK FAMTGWRLG++A P +
Sbjct: 197 ISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMV 256
Query: 207 KIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 266
K Q + + Q + V +M K + RR + K E+ G+ +
Sbjct: 257 KFQMYNATCPVTFIQ-YAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVK 314
Query: 267 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRIS 324
P+GAFY+F G S+ +L +A+VA+VPG AFG + +RIS
Sbjct: 315 PKGAFYIFPRIRD------TGL----TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRIS 364
Query: 325 YAASLTTLQAAVERIKKGL 343
YA + L+ A++R+++ L
Sbjct: 365 YATAYEKLEEAMDRMERVL 383
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 179/309 (57%), Gaps = 22/309 (7%)
Query: 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 94
+PDQ++V+NGAKQ++ A +A+ PGDEVI+ +P WVSY +A T ++ T +S+N
Sbjct: 100 SPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKN 159
Query: 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154
F + +E L K++ +++ SP+NPTG VY + L+ + R+ AK ++SDE+Y+
Sbjct: 160 FQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRL-AKKRNFYIISDEVYDS 218
Query: 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 214
++Y TS + ++R + +NGFSK+ +MTGWR+GY+ + A +KIQS TS
Sbjct: 219 LVYTDE-FTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTS 277
Query: 215 GASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 274
++++Q S MV+ F+ER++F+V+ ++ GVK EP+GAFYLF
Sbjct: 278 CINTVAQYAALKALEVDN------SYMVQTFKERKNFVVERLKKM-GVKFVEPEGAFYLF 330
Query: 275 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQA 334
F + C LL++ +VALVPG AF +R+S+A S+ L
Sbjct: 331 -------------FKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTE 377
Query: 335 AVERIKKGL 343
A++RI+ L
Sbjct: 378 ALDRIEDFL 386
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 161/322 (50%), Gaps = 24/322 (7%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR------ 90
++ILV+ GA S+ ++ + PGDEVII PF+ Y M R+A A PV +P R
Sbjct: 86 EEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145
Query: 91 ---ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
S ++ DP+ LESK + K++ +IL +P NP G VY + L IA + KH L +
Sbjct: 146 MKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI- 204
Query: 148 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 207
SDE+YE ++Y TH A+LPGMWERT+T+ K F++TGW+LG+ GP H +
Sbjct: 205 SDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQT 264
Query: 208 I-QSQFTSGASSISQKXXXXXXXXXXXXXE---VVSKMVKAFRERRDFLVKSFGELEGVK 263
+ Q+ F + A+ + + + + K +RD +V+ + G+K
Sbjct: 265 VQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK 323
Query: 264 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE-SLCRYLLDKAQVALVPGDAFGD----- 317
P G +++ D S+ G++ E + +++ ++ +P AF D
Sbjct: 324 PIVPDGGYFIIADVSS-LGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKP 382
Query: 318 --DTCIRISYAASLTTLQAAVE 337
+ +R + +TL AA E
Sbjct: 383 HFEKLVRFCFIKKDSTLDAAEE 404
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 160/322 (49%), Gaps = 24/322 (7%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR------ 90
++ILV+ GA S+ ++ + PGDEVII PF+ Y M R+A A PV +P R
Sbjct: 86 EEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145
Query: 91 ---ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
S ++ DP+ LESK + K++ +IL +P NP G VY + L IA + KH L +
Sbjct: 146 MKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI- 204
Query: 148 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 207
SDE+YE ++Y TH A+LPGMWERT+T+ F++TGW+LG+ GP H +
Sbjct: 205 SDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSIGPAHLIKHLQT 264
Query: 208 I-QSQFTSGASSISQKXXXXXXXXXXXXXE---VVSKMVKAFRERRDFLVKSFGELEGVK 263
+ Q+ F + A+ + + + + K +RD +V+ + G+K
Sbjct: 265 VQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK 323
Query: 264 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE-SLCRYLLDKAQVALVPGDAFGD----- 317
P G +++ D S+ G++ E + +++ ++ +P AF D
Sbjct: 324 PIVPDGGYFIIADVSS-LGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKP 382
Query: 318 --DTCIRISYAASLTTLQAAVE 337
+ +R + +TL AA E
Sbjct: 383 HFEKLVRFCFIKKDSTLDAAEE 404
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 25/327 (7%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR------- 90
+LV+ G ++ A A+ GDEVII PF+ Y M +A PV + +
Sbjct: 93 NVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNG 152
Query: 91 ---ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
S N+ LDP L K T +++ L+L +P+NP G V+ + L+ +A + +H ++ +
Sbjct: 153 ELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCI 211
Query: 148 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 207
+DE+Y+ ++Y H S ASLPGMWERTLT+ K F+ TGW++G++ GP H +
Sbjct: 212 TDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRT 271
Query: 208 IQSQFTSGASSISQKXXXXXXXXXXXXXEVVS----KMVKAFRERRDFLVKSFGELEGVK 263
+ + SQ S + +A + RD +++S + G+K
Sbjct: 272 VHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLK 330
Query: 264 MSEPQGAFYLFIDFSTYYGSEAEGFGKIEN--SESLCRYLLDKAQVALVPGDAFGD---- 317
PQG+++L D S + + G ++ ++++ + +P F
Sbjct: 331 PLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQ 390
Query: 318 ---DTCIRISYAASLTTLQAAVERIKK 341
D IR + TLQA E+++K
Sbjct: 391 KHFDHYIRFCFVKDEATLQAMDEKLRK 417
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 25/327 (7%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR------- 90
+LV+ G ++ A A+ GDEVII PF+ Y M +A PV + +
Sbjct: 93 NVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNG 152
Query: 91 ---ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
S N+ LDP L K T +++ L+L +P+NP G V+ + L+ +A + +H ++ +
Sbjct: 153 ELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCI 211
Query: 148 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 207
+DE+Y+ ++Y H S ASLPGMWERTLT+ F+ TGW++G++ GP H +
Sbjct: 212 TDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHIMKHLRT 271
Query: 208 IQSQFTSGASSISQKXXXXXXXXXXXXXEVVS----KMVKAFRERRDFLVKSFGELEGVK 263
+ + SQ S + +A + RD +++S + G+K
Sbjct: 272 VHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLK 330
Query: 264 MSEPQGAFYLFIDFSTYYGSEAEGFGKIEN--SESLCRYLLDKAQVALVPGDAFGD---- 317
PQG+++L D S + + G ++ ++++ + +P F
Sbjct: 331 PIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQ 390
Query: 318 ---DTCIRISYAASLTTLQAAVERIKK 341
D IR + TLQA E+++K
Sbjct: 391 KHFDHYIRFCFVKDEATLQAMDEKLRK 417
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 25/327 (7%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR------- 90
+LV+ G ++ A A+ GDEVII PF+ Y M +A PV + +
Sbjct: 93 NVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNG 152
Query: 91 ---ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
S N+ LDP L K T +++ L+L +P+NP G V+ + L+ +A + +H ++ +
Sbjct: 153 ELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCI 211
Query: 148 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 207
+DE+Y+ ++Y H S ASLPGMWERTLT+ F+ TGW++G++ GP H +
Sbjct: 212 TDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHIMKHLRT 271
Query: 208 IQSQFTSGASSISQKXXXXXXXXXXXXXEVVS----KMVKAFRERRDFLVKSFGELEGVK 263
+ + SQ S + +A + RD +++S + G+K
Sbjct: 272 VHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLK 330
Query: 264 MSEPQGAFYLFIDFSTYYGSEAEGFGKIEN--SESLCRYLLDKAQVALVPGDAFGD---- 317
PQG+++L D S + + G ++ ++++ + +P F
Sbjct: 331 PLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQ 390
Query: 318 ---DTCIRISYAASLTTLQAAVERIKK 341
D IR + TLQA E+++K
Sbjct: 391 KHFDHYIRFCFVKDEATLQAMDEKLRK 417
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 157/326 (48%), Gaps = 32/326 (9%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
++NG+ TPD + V+ +++ A+ PGDE+++P P + Y + + PV
Sbjct: 93 RKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEY 152
Query: 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147
T E++ D + K+T++++ + + +P+NPTG++Y K L+EI I ++ + V+
Sbjct: 153 RTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEY-EIPVI 211
Query: 148 SDEIYEHIIYAPATHTSFASLPGMWERTLTV---NGFSKAFAMTGWRLGYIAGPKHFVAA 204
SDEIY+ + Y H S PG + + V NG SK + TGWRLGY+ +FV
Sbjct: 212 SDEIYDLMTYE-GEHIS----PGSLTKDVPVIVMNGLSKVYFATGWRLGYM----YFVDP 262
Query: 205 CNKIQSQFTSGASSISQ-------KXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFG 257
NK+ S+ +++ + + + +K +ERRD++ K
Sbjct: 263 ENKL-SEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLN 321
Query: 258 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317
E+ G+ ++PQGAFY+F G +N + +L A V V G FG+
Sbjct: 322 EIPGISTTKPQGAFYIFPKIEV---------GPWKNDKEFVLDVLHNAHVLFVHGSGFGE 372
Query: 318 DTC--IRISYAASLTTLQAAVERIKK 341
R + + L+ A++R +K
Sbjct: 373 YGAGHFRAVFLPPIEILEEAMDRFEK 398
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 145/310 (46%), Gaps = 32/310 (10%)
Query: 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 95
PD I+++ G+ + A+ ++ GDEV+I P + Y R A PV +
Sbjct: 89 PDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCDFTVES-- 146
Query: 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155
LE L++K++ +I+ SPSNP G V + + + A ++SDEIY +
Sbjct: 147 ------LEEALSDKTKAIIINSPSNPLGEVIDREIYE-----FAYENIPYIISDEIYNGL 195
Query: 156 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 215
+Y +++ + E+T+ +NGFS +AMTGWR+GY+ + A K+Q
Sbjct: 196 VYEGKCYSAIEFDENL-EKTILINGFSXLYAMTGWRIGYVISNDEIIEAILKLQQNLFIS 254
Query: 216 ASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFI 275
A +ISQ ++ M+K F RR ++K + G +++ P GA+Y+F
Sbjct: 255 APTISQYAALKAFEKETERE--INSMIKEFDRRRRLVLKYVKDF-GWEVNNPIGAYYVFP 311
Query: 276 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQ 333
+ E+ LL + VAL PG FG IRISYA S ++
Sbjct: 312 NIG-------------EDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIK 358
Query: 334 AAVERIKKGL 343
+ERIK+ L
Sbjct: 359 EGLERIKEFL 368
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 157/338 (46%), Gaps = 33/338 (9%)
Query: 31 GLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP- 88
G+ Y P+ ++LV+ GA ++I AVL + PG EV++ PF+ SY + +A A V +P
Sbjct: 80 GVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPL 139
Query: 89 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148
F LD L +T ++R LI+ SP NPTG+V L IA I L+V++
Sbjct: 140 VPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAA-NLVVIT 198
Query: 149 DEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 208
DE+YEH+++ A H A GM ERT+T++ + F TGW++G+ GP +A
Sbjct: 199 DEVYEHLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAA 258
Query: 209 QSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 268
+ + + Q V+ + + R RRD L E+ G + +
Sbjct: 259 KQYLSYVGGAPFQPAVALALDTEDAW---VAALRNSLRARRDRLAAGLTEI-GFAVHDSY 314
Query: 269 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----------- 317
G ++L D G+ ++S C L +K VA +P AF D
Sbjct: 315 GTYFLCAD------PRPLGY---DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQAD 365
Query: 318 --DTCIRISYAASLTTLQAAVERIKKGLLTLRP--GVP 351
+ +R ++ TL A+ R+ +L RP GVP
Sbjct: 366 VWNHLVRFTFCKRDDTLDEAIRRLS--VLAERPATGVP 401
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP--------T 89
++LV+ GA +++ + GDEVII PF+ Y M + A P +P T
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 90 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149
S +++LD LE+ EK++++I+ +P NP G V + L+ +A + K +L +SD
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW-NVLCVSD 221
Query: 150 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 209
E+YEH+++ P H +LPGMWERT+T+ K F++TGW++G+ GP+ + +
Sbjct: 222 EVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVH 281
Query: 210 SQFTSGASSISQKXXXXXXXXXXXXXE----VVSKMVKAFRERRDFLVKSFGELEGVKMS 265
++ Q+ + + + +RD++ E+ G+ +
Sbjct: 282 QNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNPT 340
Query: 266 EPQGAFYLFIDFST 279
PQG +++ D+S+
Sbjct: 341 VPQGGYFMVADWSS 354
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 14/254 (5%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP--------T 89
++LV+ GA +++ + GDEVII PF+ Y M + A P +P T
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 90 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149
S +++LD LE+ EK++++I+ +P NP G V + L+ +A + K +L +SD
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW-NVLCVSD 221
Query: 150 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 209
E+YEH+++ P H +LPGMWERT+T+ F++TGW++G+ GP+ + +
Sbjct: 222 EVYEHMVFEPFEHIRICTLPGMWERTITIGSAGXTFSLTGWKIGWAYGPEALLKNLQMVH 281
Query: 210 SQFTSGASSISQKXXXXXXXXXXXXXE----VVSKMVKAFRERRDFLVKSFGELEGVKMS 265
++ Q+ + + + +RD++ E+ G+ +
Sbjct: 282 QNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNPT 340
Query: 266 EPQGAFYLFIDFST 279
PQG +++ D+S+
Sbjct: 341 VPQGGYFMVADWSS 354
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 38/328 (11%)
Query: 29 ENGLSYTPD---QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY-PEMA------- 77
E Y PD I V+ GA +++ A+ A+ GDEVI P + SY P +A
Sbjct: 81 ERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVK 140
Query: 78 RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 137
R+A P +F +D + + L+E++RL+IL +P NP+ +V+ + + +
Sbjct: 141 RMALQPP---------HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQA 191
Query: 138 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 197
+A H + V+SDE+YEHI ++ H S + P + ER + V+ F K + MTGW++GY
Sbjct: 192 IAGH-EIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA 250
Query: 198 PKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFG 257
P A K+ T ++ +Q E + +R++RD LV +
Sbjct: 251 PAPISAEIRKVHQYLTFSVNTPAQ---LALADMLRAEPEHYLALPDFYRQKRDILVNALN 307
Query: 258 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317
E +++ +G ++L +D+S +++ E C++L + VA +P F
Sbjct: 308 E-SRLEILPCEGTYFLLVDYS--------AVSTLDDVE-FCQWLTQEHGVAAIPLSVFCA 357
Query: 318 D----TCIRISYAASLTTLQAAVERIKK 341
D IR+ +A +TL AA ER+++
Sbjct: 358 DPFPHKLIRLCFAKKESTLLAAAERLRQ 385
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 31/313 (9%)
Query: 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-EN 94
P+ ++V++GA +++ + ++ PGDEV++ PF+ Y A +A A ++ ++ E
Sbjct: 78 PESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEG 137
Query: 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154
F LD LE LT ++R L+L +P NPTG V+ + L+ IAR+ H L ++SDE+Y+
Sbjct: 138 FRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAH-DLFLISDEVYDE 196
Query: 155 IIYA--PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 212
+ Y P FA ERT TV K TG+R+G+I GPK F+ ++ Q+
Sbjct: 197 LYYGERPRRLREFAP-----ERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMR-QW 250
Query: 213 TSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY 272
TS ++ + + + +R RRD L + G+++ P+G ++
Sbjct: 251 TSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYVPEGTYF 309
Query: 273 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF----GDDTCIRISYAAS 328
L + + + F L+++A+VAL+P AF R ++ +
Sbjct: 310 LMAELPGW-----DAF-----------RLVEEARVALIPASAFYLEDPPKDLFRFAFCKT 353
Query: 329 LTTLQAAVERIKK 341
L A+ER+ +
Sbjct: 354 EEELHLALERLGR 366
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 148/331 (44%), Gaps = 35/331 (10%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP-------- 88
+ + V+ GA + IL ++ + + GDEVI+ PF+ Y + V +P
Sbjct: 119 ENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELD 178
Query: 89 ---TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 145
TR E + +D + E +T K++ +I+ +P NP G V+ + L + I KH ++
Sbjct: 179 QRNTR-GEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKH-NVV 236
Query: 146 VLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVA 203
++SDE+YEH+ Y + T A+L P + + TLTV +FA TGWR+G++ ++
Sbjct: 237 IISDEVYEHL-YFTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELLS 295
Query: 204 ACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVK 263
K ++ + S Q+ KM + + + F EL G+
Sbjct: 296 YAAKAHTRICFASPSPLQEACANSINDALKIG-YFEKMRQEYINKFKIFTSIFDEL-GLP 353
Query: 264 MSEPQGAFYLFIDFSTY-------YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF- 315
+ P+G +++ +DFS Y E GK + +L+++ V +P F
Sbjct: 354 YTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGK---DFRISHWLINELGVVAIPPTEFY 410
Query: 316 ------GDDTCIRISYAASLTTLQAAVERIK 340
+ +R + L+ AVER+K
Sbjct: 411 IKEHEKAAENLLRFAVCKDDAYLENAVERLK 441
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 21/308 (6%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
+ +V+ G+K+ + +LA GD +++P P + + A IA A +P +F
Sbjct: 101 EAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFN 160
Query: 98 DPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154
+ LE + E K R++IL PSNPT + + + + AK ++V+ D Y
Sbjct: 161 E---LERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVAL-AKQYDVMVVHDLAYAD 216
Query: 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 214
I+Y S +PG + + SK++ M GWR+G++ G V+A +I+S
Sbjct: 217 IVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDY 276
Query: 215 GASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 274
G + Q + V + + +++RRD LVK E G + P+ + Y++
Sbjct: 277 GTFTPLQ---VAAIAALEGDQQCVRDIARQYQQRRDVLVKGLRE-AGWMVENPKASMYVW 332
Query: 275 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTL 332
Y G +E + LL A+V++ PG FGD D +R + + L
Sbjct: 333 AKIPEPYAH----LGSLE----FAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRL 384
Query: 333 QAAVERIK 340
+ AV IK
Sbjct: 385 RQAVRGIK 392
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 47/351 (13%)
Query: 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVII 65
+QG ++ R + +F+ N +G + D + + GA S+ A+ S DE I
Sbjct: 75 AQGDVETRAA---IAEFLNNT--HGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFIT 129
Query: 66 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 125
AP++ Y A A V +P +E+F +D LE ++ +R +I+ SP+NP+G+V
Sbjct: 130 IAPYFPEYKVFVNAAGARLVEVPAD-TEHFQIDFDALEERINAHTRGVIINSPNNPSGTV 188
Query: 126 YPKNLLDEIARIVAKHPR-----LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 180
Y + + +++ ++ K + + +++DE Y I+Y F + ++ TL
Sbjct: 189 YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVY-DGIKVPFVT--KYYDNTLVCYS 245
Query: 181 FSKAFAMTGWRLGYIAGPKH-------FVAACNKIQSQFTSGASSISQKXXXXXXXXXXX 233
+SK+ ++ G R+GY+ P + A C ++ A S+ QK
Sbjct: 246 YSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQK--------XIV 297
Query: 234 XXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 293
+ + + A++E RD L + + G +P GAFY F+ ++
Sbjct: 298 KCQGATGDINAYKENRDLLYEGLTRI-GYHCFKPDGAFYXFVK------------ALEDD 344
Query: 294 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQA---AVERIKK 341
S + C ++ V +V D FG +RISY ++ A E+I K
Sbjct: 345 SNAFCEKAKEE-DVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYK 394
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 13/261 (4%)
Query: 16 LWSFVQQFVINLKENG-LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP 74
+W + F K + P+ +LV+NG ++IL + + +PGDE+++ PF+ +Y
Sbjct: 81 IWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYN 140
Query: 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 134
A+IA + + R E F + P+ LES + E+++ ++L +P NPTG VY K+ +
Sbjct: 141 AFAKIAGVKLIPVTRRXEEGFAI-PQNLESFINERTKGIVLSNPCNPTGVVYGKDEXRYL 199
Query: 135 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLG 193
I +H L++ DE+Y I++ FAS L ++ + ++ S F+ G R+G
Sbjct: 200 VEIAERHGLFLIV-DEVYSEIVF----RGEFASALSIESDKVVVIDSVSXKFSACGARVG 254
Query: 194 -YIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFL 252
I + ++ K+ +Q + Q + V + +RER + +
Sbjct: 255 CLITRNEELISHAXKL-AQGRLAPPLLEQIGSVGLLNLDDSFFDFVR---ETYRERVETV 310
Query: 253 VKSFGELEGVKMSEPQGAFYL 273
+K E + ++P GAFY+
Sbjct: 311 LKKLEEHGLKRFTKPSGAFYI 331
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 137/317 (43%), Gaps = 27/317 (8%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96
D +++ +G IL A+ A+C GD ++P P + Y + + R ++
Sbjct: 105 DNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWE 164
Query: 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156
D + +K++LLI+ +PSNP GS + + +++I R+ A+ RL + SDEIY ++
Sbjct: 165 ADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRL-AEELRLPLFSDEIYAGMV 223
Query: 157 YA----PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI-------AGPKHFVAAC 205
+ AT TS A R + + G + + GWRLG++ GP F+
Sbjct: 224 FKGKDPNATFTSVADFETTVPRVI-LGGTAXNLVVPGWRLGWLLYVDPHGNGPS-FLEGL 281
Query: 206 NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265
++ G ++ Q E + ++V E +L GE G+ +
Sbjct: 282 KRV-GMLVCGPCTVVQ--AALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPT 338
Query: 266 EPQGAFYLF--IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 323
P+GA YL ID Y I+ LL++ V ++PG F R+
Sbjct: 339 MPRGAMYLMSRIDLEKYR--------DIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRL 390
Query: 324 SYAASLTTLQAAVERIK 340
+ + + AVERIK
Sbjct: 391 TTTRPVEVYREAVERIK 407
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 133/310 (42%), Gaps = 16/310 (5%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
+++++G Q+I + + +PG +++P P + Y +A + +++ +
Sbjct: 120 DVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEI 179
Query: 98 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157
D K LE + EK+ LI+ +PSNP GSV+ K L +I + A+ + +L+DEIY +++
Sbjct: 180 DLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQ-CVPILADEIYGDMVF 238
Query: 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------SQ 211
+ + A+L L+ G +K + + GWRLG+I N+I+ SQ
Sbjct: 239 SDCKYEPLATL-STDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQ 297
Query: 212 FTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAF 271
G +I Q E + + D + + G++ P GA
Sbjct: 298 RILGPCTIVQG--ALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAM 355
Query: 272 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTT 331
YL + G E E F + EN L+ + V +P F IR+
Sbjct: 356 YLMV------GIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVM 409
Query: 332 LQAAVERIKK 341
+ A RI++
Sbjct: 410 MLEACSRIQE 419
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 29/295 (9%)
Query: 60 GDEVIIPAPFWVSYPEMARIADATPVILPTRISEN--FLLDPKVLESKLTEKSRLLILCS 117
D+++I P + + + + + +I P + EN +++D + +E+K+ + +L ILC+
Sbjct: 114 NDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCN 172
Query: 118 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER-TL 176
P NP G V+ K+ L ++ I KH + ++SDEI+ II H AS+ +E+ T+
Sbjct: 173 PHNPVGRVWTKDELKKLGDICLKH-NVKIISDEIHSDIILKKHKHIPMASISKEFEKNTI 231
Query: 177 TVNGFSKAFAMTGWRLGYIAGP-----KHFVAACNKIQSQFTSGASSISQKXXXXXXXXX 231
T +K F + G + Y+ P K A +I + + S ++ +
Sbjct: 232 TCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESW 291
Query: 232 XXXXEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK 290
+ ++ DF +K E + +K+ +P+G + L++DFS A G
Sbjct: 292 ------LESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFS------ALGLS- 338
Query: 291 IENSESLCRYLLDKAQVALVPGDAF--GDDTCIRISYAASLTTLQAAVERIKKGL 343
E L L+ K +VAL G++F G RI+ A + L+ A+ RIK +
Sbjct: 339 ---DEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 22/306 (7%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96
D++ + G K ++ V +PGD V++P P + Y +AD PV L ++L
Sbjct: 110 DEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLE-PPHYL 168
Query: 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE-IARIVAKHPRLLVLSDEIYEHI 155
D ++S++ +K++L+ L P+NPTGS K + DE IA+ + ++ D Y
Sbjct: 169 PDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTK--IVHDFAYGAF 226
Query: 156 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 215
+ + AS G + + + SK + +G+R+G+ G K + A K Q+ +G
Sbjct: 227 GFDAKNPSILASENGK-DVAIEIYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTNAG 285
Query: 216 ASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFI 275
Q E S + F+ RRD + + + +G Y+++
Sbjct: 286 XFGALQDAAIYALNHYDDFLEEQSNV---FKTRRDRFEAXLAKAD-LPFVHAKGGIYVWL 341
Query: 276 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC--IRISYAASLTTLQ 333
+ Y +SE ++L+ + + + PG FG++ +RIS A L
Sbjct: 342 ETPPGY-----------DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLD 390
Query: 334 AAVERI 339
A R+
Sbjct: 391 EAAIRL 396
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 134/312 (42%), Gaps = 20/312 (6%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
+++++G Q+I + + +PG ++IP P + Y +A + +++ +
Sbjct: 97 DVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEI 156
Query: 98 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157
D K LES + EK+ L++ +PSNP GSV+ K L +I VA+ + +L+DEIY +++
Sbjct: 157 DLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILA-VAERQCVPILADEIYGDMVF 215
Query: 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGAS 217
+ + A+L L+ G + + + GWRLG+I N+I+ G
Sbjct: 216 SDCKYEPMATL-STNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIR----DGLV 270
Query: 218 SISQKXXXXXXXXXXXXXEVVSKMVKAF--------RERRDFLVKSFGELEGVKMSEPQG 269
+SQ+ ++ + + F + D + + G++ P G
Sbjct: 271 KLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQPVRPSG 330
Query: 270 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASL 329
A YL + G E E F + EN L+ + V +P F R+
Sbjct: 331 AMYLMV------GIEMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFFRVVITVPE 384
Query: 330 TTLQAAVERIKK 341
+ A RI++
Sbjct: 385 VMMLEACSRIQE 396
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 132/313 (42%), Gaps = 25/313 (7%)
Query: 31 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 90
G+ P +++++ G+ L A A+ GD V I AP + SY ++ R PV LPT
Sbjct: 86 GVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPT- 144
Query: 91 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150
EN L + L L + SP+NPTG+ + A+ +SDE
Sbjct: 145 APENRLQPVPADFAGLDLAG--LXVASPANPTGTXLDHAAXGALIE-AAQAQGASFISDE 201
Query: 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 210
IY I Y T+ + + +N FSK F+ TGWR+G+ P+ V +I
Sbjct: 202 IYHGIEYEAKAVTALE----LTDECYVINSFSKYFSXTGWRVGWXVVPEDQVRVVERIAQ 257
Query: 211 QFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA 270
A SQ + + ++ R ++ + +++ P GA
Sbjct: 258 NXFICAPHASQVAALAALDCDAE----LQANLDVYKANRKLXLERLPKAGFTRIAPPDGA 313
Query: 271 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA 327
FY++ D S ++S + +L+KA VA+ PG F + +R SYA
Sbjct: 314 FYVYADVSDL----------TDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR 363
Query: 328 SLTTLQAAVERIK 340
+ ++ ++R++
Sbjct: 364 ATADIEEGLDRLE 376
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 38/327 (11%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN-- 94
D I+ + G ++ AV PGD VII P V YP I + I+ + E
Sbjct: 90 DWIINTAGVVPAVFNAVREFTKPGDGVIIITP--VYYPFFMAIKNQERKIIECELLEKDG 147
Query: 95 -FLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152
+ +D + LE +K+ + L+ CSP NP G V+ K+ L +I IV K L++ SDEI+
Sbjct: 148 YYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLK-SDLMLWSDEIH 206
Query: 153 EHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 211
+I HT F S+ + ++T+T SK F + G G + + I+ +
Sbjct: 207 FDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG------MGMSNIIIKNPDIRER 260
Query: 212 FTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR-------ERRDFLVKSFGELEGVKM 264
FT + S E+ K + ++ +VK F E+ ++
Sbjct: 261 FTKSRDATS---GMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEI 317
Query: 265 SEP--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC-- 320
P +G + +IDF K+++ +++ +++ KAQ+ G FGD
Sbjct: 318 KAPLIEGTYLQWIDFRAL---------KMDH-KAMEEFMIHKAQIFFDEGYIFGDGGIGF 367
Query: 321 IRISYAASLTTLQAAVERIKKGLLTLR 347
RI+ AA + +Q ++ER+ K L L+
Sbjct: 368 ERINLAAPSSVIQESLERLNKALKDLK 394
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 146/318 (45%), Gaps = 20/318 (6%)
Query: 29 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88
E+ S+ + I+ G +I A+ A G+ V+I +P + + R+ + ++
Sbjct: 82 EHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRK-LVSN 140
Query: 89 TRISEN--FLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 145
+ EN F +D + LE+ + E +L +LC+P NP G V+ + +L++I + KH +L
Sbjct: 141 SLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVIL 200
Query: 146 VLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 204
V SDEI++ + H SF ++ P + L ++ +K F + G + Y + A
Sbjct: 201 V-SDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCA 259
Query: 205 CNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFG-ELEGVK 263
K Q Q + +S + + E F V+ F E +K
Sbjct: 260 QFKHQ-QLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLK 318
Query: 264 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI-- 321
+ +PQG + +++DFS Y ++ ++L L D+A+V L G +G + +
Sbjct: 319 VMKPQGTYLIWLDFSDYGLTD----------DALFTLLHDQAKVILNRGSDYGSEGELHA 368
Query: 322 RISYAASLTTLQAAVERI 339
R++ AA + ++ +RI
Sbjct: 369 RLNIAAPKSLVEEICKRI 386
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 146/335 (43%), Gaps = 53/335 (15%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
KE+ + + IL +G +I A+ A GD V+I +P + + R+ D V
Sbjct: 111 KEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVEN 170
Query: 88 PTRI-SENFLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 145
+I + F +D + LE + + + ++ +LCSP NP G V+ + L +IA + KH +L
Sbjct: 171 SLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVIL 230
Query: 146 VLSDEIYEHIIYAPATHTSFASLPGMWE----------RTLTVNGFSKAFAMT------- 188
V SDEI++ + TH S +L ++ +T + G +FA+
Sbjct: 231 V-SDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRR 289
Query: 189 GWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 246
++ +A +H V I +Q F G + + V+ +K
Sbjct: 290 KFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEE------------LKTVIEGNIK--- 334
Query: 247 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 306
++K +K+ EP+G + +++DFS Y ++ + L L ++A+
Sbjct: 335 ----LVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQ----------LSEKLQNEAK 380
Query: 307 VALVPGDAFGDDT--CIRISYAASLTTLQAAVERI 339
V L G FG + R++ A T+Q A+ RI
Sbjct: 381 VVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRI 415
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 134/313 (42%), Gaps = 32/313 (10%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
+I +S+GAK + + +L+ P V I P + +Y ++AR+ A +I + EN
Sbjct: 97 EIFISDGAKVDLFR-LLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFF 155
Query: 98 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157
P+ E + +L LCSP+NPTG+V K+ L I +H +L+L D Y I
Sbjct: 156 -PEFPEDTHID---ILCLCSPNNPTGTVLNKDQLRAIVHYAIEH-EILILFDAAYSTFIS 210
Query: 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-------HFV-AACNKIQ 209
P+ S +P + +N FSK G RLG+ P+ HFV +
Sbjct: 211 DPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFL 270
Query: 210 SQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 269
S +GAS +Q+ + + +RE D L K+ G ++ +
Sbjct: 271 STTFNGASIPAQEAGVAGLSILPQL-----EAIHYYRENSDLLRKAL-LATGFEVFGGEH 324
Query: 270 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC--IRISYAA 327
A YL++ + S+ + F + L + +A+ PG FG +R S
Sbjct: 325 APYLWVKPTQANISDRDLFD----------FFLREYHIAITPGIGFGRSGSGFVRFSSLG 374
Query: 328 SLTTLQAAVERIK 340
+ AA ER++
Sbjct: 375 KREDILAACERLQ 387
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 141/312 (45%), Gaps = 27/312 (8%)
Query: 39 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP-TRISENFLL 97
I+ S G ++ ++ A + V++ P + + E + + P + ++ + +
Sbjct: 85 IVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQNDTYAI 144
Query: 98 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157
D + LE + + +L +LCSP NP G V+ K L ++ + K+ ++V++DEI+ IIY
Sbjct: 145 DFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLGSLCTKY-NVIVVADEIHSDIIY 203
Query: 158 APATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS-- 214
A THT FASL + RT+T S F + G + I P K++ FTS
Sbjct: 204 ADHTHTPFASLSEELAARTITCXAPSXTFNIAGLQASIIIIPN------EKLRQAFTSIQ 257
Query: 215 ---GASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGA 270
G ++ + ++++ + F + + + + + +P+G+
Sbjct: 258 YRQGFHGLNIFAYTAXQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVXKPEGS 317
Query: 271 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRISYAAS 328
F L+ID S S+ E + L +K ++ + PG+ + G + I I+
Sbjct: 318 FLLWIDCSALNLSQDER----------TKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCP 367
Query: 329 LTTLQAAVERIK 340
+ L+ + R++
Sbjct: 368 RSVLEEILNRLR 379
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 25/303 (8%)
Query: 44 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLE 103
G+++ + +LA+ P D +++P + SY AR+A ++P R E+ L D K +
Sbjct: 95 GSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLR--EDGLADLKAVP 152
Query: 104 SKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163
+ ++++L+L P+NPTG+V +E + KH L ++ D Y +Y +
Sbjct: 153 EGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKH-GLWLIHDNPYVDQVYEGEAPS 211
Query: 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS--QFTSGASSISQ 221
A LPG ER + + SK++ + G+RLG+ G + +A +++ F A +
Sbjct: 212 PLA-LPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRM 270
Query: 222 KXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGV-KMSEPQGAFYLFIDFSTY 280
EVV + +RER + ++ L+GV + P+ YL
Sbjct: 271 G-----VEALKTPKEVVRGYARVYRERALGMAEA---LKGVLSLLPPRATMYL------- 315
Query: 281 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIK 340
+G EG +++ E R + +A G G +RI+ L L A +RI+
Sbjct: 316 WGRLPEG---VDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIR 372
Query: 341 KGL 343
+ L
Sbjct: 373 EAL 375
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 21/310 (6%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI--ADATPVILPTRISEN 94
D ++++ G + ++ AV A + GD+V I P + + ++ + PV L ++
Sbjct: 103 DGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEXVPVQLDYVSADE 162
Query: 95 FL--LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152
LD LE +R+ + +P+NP G VY + +IA + A++ V++D++Y
Sbjct: 163 TRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYG-ATVIADQLY 221
Query: 153 EHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 211
+ YA A++T + + E +T+ G S +++G+RLG G + +A K+Q+
Sbjct: 222 SRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLGVAFGSRAIIARXEKLQAI 281
Query: 212 FTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAF 271
+ A+ SQ E + + RD L+ EGV PQ
Sbjct: 282 VSLRAAGYSQAVLRGWFDEAPGWXE---DRIARHQAIRDELLHVLRGXEGVFARTPQAGS 338
Query: 272 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC--IRISYAASL 329
YLF + AE + L +A V + PG F T +R++++
Sbjct: 339 YLFPRLPKLAVAPAE----------FVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDH 388
Query: 330 TTLQAAVERI 339
AA RI
Sbjct: 389 EAAVAAARRI 398
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 130/311 (41%), Gaps = 26/311 (8%)
Query: 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 95
P+QIL +NGA + L + ++ PGD VI P + ++ + A + +
Sbjct: 81 PEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGW 140
Query: 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155
L D + L + ++ + + + +NPTG+V + L+E+ I A +LSDE+Y
Sbjct: 141 LPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEI-ASEVGAYILSDEVYRSF 199
Query: 156 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 215
+ S+ ++++ + VN S +++ G R+G++A H V + +T
Sbjct: 200 -----SELDVPSIIEVYDKGIAVNSLSXTYSLPGIRIGWVAA-NHQVTDILRDYRDYTXI 253
Query: 216 ASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFI 275
+ + ++ + R L ++ L+ EP ++
Sbjct: 254 CAGVFDDLVAQL---------ALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPA 304
Query: 276 DFSTYYGSEAEGFGKIENS---ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTL 332
ST F KI E C LL + V LVPG+ F D +R+ +A TL
Sbjct: 305 VVST-------SFVKIAVDXPXEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQETL 357
Query: 333 QAAVERIKKGL 343
+E++ + L
Sbjct: 358 IKGLEKLSQFL 368
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 60 GDEVIIPAPFWVSYPEMARIAD--ATPVILPTRISENFLLDPKVLESKLTEKS-RLLILC 116
GD++ I P + Y + + D V L + ++ ++P +E KL + S + LI+
Sbjct: 193 GDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIE-KLKDPSIKALIVV 251
Query: 117 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176
+P+NPT + N L+ I + V K+P+L ++SDE+Y + P + ++ +P T
Sbjct: 252 NPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVYG--AFVPNFKSIYSVVP---YNTX 306
Query: 177 TVNGFSKAFAMTGWRLGYIA 196
V +S F TGWRLG IA
Sbjct: 307 LVYSYSXLFGCTGWRLGVIA 326
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 60 GDEVIIPAPFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 116
GD+V I P + Y PE+A+ A V + S N+ L+ KL + + + C
Sbjct: 194 GDKVAIGMPVFTPYIEIPELAQYA-LEEVAINADPSLNWQYPDSELD-KLKDPAIKIFFC 251
Query: 117 -SPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174
+PSNP + L+ + IVA+H P L++L+D++Y +A + FA P E
Sbjct: 252 VNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADDFQSLFAICP---EN 306
Query: 175 TLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACNKIQ 209
TL V FSK F TGWRLG +A + F A +K+Q
Sbjct: 307 TLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQ 343
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 60 GDEVIIPAPFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 116
GD+V I P + Y PE+A+ A V + S N+ L+ KL + + + C
Sbjct: 194 GDKVAIGMPVFTPYIEIPELAQYA-LEEVAINADPSLNWQYPDSELD-KLKDPAIKIFFC 251
Query: 117 -SPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174
+PSNP + L+ + IVA+H P L++L+D++Y +A + FA P E
Sbjct: 252 VNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADDFQSLFAICP---EN 306
Query: 175 TLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACNKIQ 209
TL V FSK F TGWRLG +A + F A +K+Q
Sbjct: 307 TLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQ 343
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 136/339 (40%), Gaps = 25/339 (7%)
Query: 20 VQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79
+ +F+ + + + P++++++ GA + + + PGD ++P+P++ ++ R
Sbjct: 92 IAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRW 151
Query: 80 ADATPVI-LPTRISENFLLDPKVLES------KLTEKSRLLILCSPSNPTGSVYPKNLLD 132
+I + S NF + K ++ K K + LIL +PSNP G+ K+ L
Sbjct: 152 RTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLK 211
Query: 133 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT-------VNGFSKAF 185
+ +H + ++ DEIY ++ S A + E T V SK
Sbjct: 212 SVLSFTNQH-NIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM 270
Query: 186 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAF 245
+ G+R+G I V C + S F S+ +Q + +
Sbjct: 271 GLPGFRVGIIYSFNDDVVNCARKMSSF-GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRL 329
Query: 246 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 305
+R E+ G+K + + ++D ++ SL R +++
Sbjct: 330 GKRHKHFTNGL-EVVGIKCLKNNAGLFCWMDLRPLLREST-----FDSEMSLWRVIINDV 383
Query: 306 QVALVPGDAF--GDDTCIRISYA-ASLTTLQAAVERIKK 341
++ + PG +F + R+ +A T+ A+ RI++
Sbjct: 384 KLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR 422
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 54/335 (16%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN-- 94
D + ++G +I V SPGD++++ P + + + + VI I EN
Sbjct: 86 DWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIE-GNGRRVISSDLIYENSK 144
Query: 95 FLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153
+ ++ LE KL S R + C+P NP G + + + IA + AKH ++L++SDEI+
Sbjct: 145 YSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKH-QVLLISDEIHG 203
Query: 154 HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV-----AACNKI 208
++ T F+ + W + I+ F AAC I
Sbjct: 204 DLVLTDEDITP---------------AFTVDWDAKNWVVSLISPSXTFNLAALHAACAII 248
Query: 209 ----------QSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRER----RDFLVK 254
+S F +G + + + ++ + R+ R+FL K
Sbjct: 249 PNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAK 308
Query: 255 SFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314
E+ VK+ + ++ ++D S G N+E C+YL +K + + G+
Sbjct: 309 ---EVPEVKVLDSNASYLAWVDIS--------ALGX--NAEDFCKYLREKTGLIISAGNG 355
Query: 315 F--GDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347
+ +RI+ A + +R+K+G+L L
Sbjct: 356 YRGNGHEFVRINLACPKELVIDGXQRLKQGVLNLN 390
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 99 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158
P + ++K T+ ++ CSP+NPTG+ + L E+ K+ +LV D Y I
Sbjct: 202 PDLSKAKRTD---IIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVY-DAAYALYISN 257
Query: 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--------AACNKIQS 210
P + +PG E + FSK TG RLG+ PK A N++ +
Sbjct: 258 PDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMT 317
Query: 211 QFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA 270
+GAS+I Q + ++ M+K ++E L +F E+ G + A
Sbjct: 318 TCFNGASNIVQ--AGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDA 374
Query: 271 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAAS 328
Y+++ F GK S + +L++ + PG +G + +R S S
Sbjct: 375 PYIWVGFP----------GKP--SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGS 422
Query: 329 LTTLQAAVERIKK 341
+ AV R K+
Sbjct: 423 RENILEAVRRFKE 435
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 53 VLAVCSPGDEVIIPAPFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTEK 109
V + GD+V I P + Y PE+A+ A V + + N+ L+ KL +
Sbjct: 187 VNGLLKAGDKVAIGMPVFTPYIEIPELAQYA-LEEVAINADPALNWQYPDSELD-KLKDP 244
Query: 110 SRLLILC-SPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFAS 167
+ + C +PSNP + L+ + +IVA+H P L++L+D++Y +A + FA
Sbjct: 245 AIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVYG--TFADGFQSLFAI 302
Query: 168 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 202
P TL V FSK F TGWRLG +A K +
Sbjct: 303 CPA---NTLLVYSFSKYFGATGWRLGVVAAHKENI 334
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
K+ G++ T D + +NG+ + + Q + A PG + P + +P +A+ T I
Sbjct: 84 KQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK-GTHTEFIA 142
Query: 88 PTRISENFLLDPKV-LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 146
+R +F +D V LE ++ ++ + +P+NPTG V LD++ RI+ P +++
Sbjct: 143 VSR-GADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTS---LDDVERIINVAPGIVI 198
Query: 147 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
+ DE Y +P+ T P + + SKAF G RLGY F+ A
Sbjct: 199 V-DEAYAEFSPSPSATTLLEKYP---TKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAV 253
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
K+ G++ T D + +NG+ + + Q + A PG + P + +P +A+ T I
Sbjct: 81 KQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK-GTHTEFIA 139
Query: 88 PTRISENFLLDPKV-LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 146
+R +F +D V LE ++ ++ + +P+NPTG V LD++ RI+ P +++
Sbjct: 140 VSR-GADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDV---TSLDDVERIINVAPGIVI 195
Query: 147 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
+ DE Y +P+ T P + + SKAF G RLGY F+ A
Sbjct: 196 V-DEAYAEFSPSPSATTLLEKYP---TKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAV 250
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 24/291 (8%)
Query: 22 QFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81
F+ ++ N +++ P+ ++++ GA + + + PG+ V+IP P++ + +
Sbjct: 95 DFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRT 154
Query: 82 ATPVI-LPTRISENFLLDPKVLESKLTEKSRL------LILCSPSNPTGSVYPKNLLDEI 134
++ + S F + LE E + +++ +PSNP G+ +N L +
Sbjct: 155 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 214
Query: 135 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL---------PGMWERTLTVNGFSKAF 185
V + + ++SDEIY ++ + S + +W+R V SK
Sbjct: 215 LSFV-EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL 273
Query: 186 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAF 245
+ G+R+G I V A S F SS +Q +++ K
Sbjct: 274 GLPGFRVGAIYSNDDMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRL 332
Query: 246 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDF-----STYYGSEAEGFGKI 291
++R+ LV + G+ + ++D S + +E E + KI
Sbjct: 333 KQRQKKLVSGL-QKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKI 382
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 24/291 (8%)
Query: 22 QFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81
F+ ++ N +++ P+ ++++ GA + + + PG+ V+IP P++ + +
Sbjct: 97 DFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRT 156
Query: 82 ATPVI-LPTRISENFLLDPKVLESKLTEKSRL------LILCSPSNPTGSVYPKNLLDEI 134
++ + S F + LE E + +++ +PSNP G+ +N L +
Sbjct: 157 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 216
Query: 135 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL---------PGMWERTLTVNGFSKAF 185
V + + ++SDEIY ++ + S + +W+R V SK
Sbjct: 217 LSFV-EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL 275
Query: 186 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAF 245
+ G+R+G I V A S F SS +Q +++ K
Sbjct: 276 GLPGFRVGAIYSNDDMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRL 334
Query: 246 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDF-----STYYGSEAEGFGKI 291
++R+ LV + G+ + ++D S + +E E + KI
Sbjct: 335 KQRQKKLVSGL-QKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKI 384
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 117/290 (40%), Gaps = 24/290 (8%)
Query: 23 FVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82
F+ ++ N +++ P+ ++++ GA + + + PG+ V+IP P++ + +
Sbjct: 98 FMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTG 157
Query: 83 TPVI-LPTRISENFLLDPKVLESKLTEKSRL------LILCSPSNPTGSVYPKNLLDEIA 135
++ + S F + LE E + +++ +PSNP G+ +N L +
Sbjct: 158 VEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLL 217
Query: 136 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL---------PGMWERTLTVNGFSKAFA 186
V + + ++SDEIY ++ + S + +W+R V SK
Sbjct: 218 SFV-EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG 276
Query: 187 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFR 246
+ G+R+G I V A S F SS +Q +++ K +
Sbjct: 277 LPGFRVGAIYSNDDMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLK 335
Query: 247 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDF-----STYYGSEAEGFGKI 291
+R+ LV + G+ + ++D S + +E E + KI
Sbjct: 336 QRQKKLVSGL-QKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKI 384
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 36 PDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISEN 94
P+Q+LVS GA + I + A C PG D ++ P + Y A +PT +N
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIGVECRTVPTL--DN 132
Query: 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGS-VYPKNL--LDEIARIVAKHPRLLVLSDEI 151
+ LD + + KL + +++ +CSP+NPTG + P++ L E+ R + +V++DE
Sbjct: 133 WQLDLQGISDKL-DGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-----GKAIVVADEA 186
Query: 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 208
Y I + P S A + + SKAFA+ G R G+ + + K+
Sbjct: 187 Y--IEFCP--QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLXKV 239
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 36 PDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISEN 94
P+Q+LVS GA + I + A C PG D ++ P + Y A +PT +N
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DN 132
Query: 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGS-VYPKNL--LDEIARIVAKHPRLLVLSDEI 151
+ LD + + KL + +++ +CSP+NPTG + P++ L E+ R + +V++DE
Sbjct: 133 WQLDLQGISDKL-DGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-----GKAIVVADEA 186
Query: 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 208
Y I + P S A + + SKAFA+ G R G+ + + K+
Sbjct: 187 Y--IEFCP--QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKV 239
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
++L+ NG+ + I LA PG +V P P +V Y A+ A V +P R +F L
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRA--DFTL 144
Query: 98 D-PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-RLLVLSDEIYEHI 155
D L + + ++ L P+NPTG+++ + I R R LV+ DE Y+
Sbjct: 145 DRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQ-- 202
Query: 156 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 213
P S+ S + L SK + G RLGY+AG ++ +K++ +
Sbjct: 203 ---PFAQESWXSRLTDFGNLLVXRTVSK-LGLAGIRLGYVAGDPQWLEQLDKVRPPYN 256
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
K+ G++ T D + +NG+ + + Q + A PG + P + +P +A+ T I
Sbjct: 84 KQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK-GTHTEFIA 142
Query: 88 PTRISENFLLDPKV-LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 146
+R +F +D V LE ++ ++ + +P+NPTG V LD++ RI+ P +++
Sbjct: 143 VSR-GADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTS---LDDVERIINVAPGIVI 198
Query: 147 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205
+ DE Y +P+ T P + + S AF G RLGY F+ A
Sbjct: 199 V-DEAYAEFSPSPSATTLLEKYP---TKLVVSRTMSXAFDFAGGRLGYFVANPAFIDAV 253
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 60 GDEVIIPAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 117
GD+V I P + Y E+ +A D V + + L+ ++ +
Sbjct: 193 GDKVAIGMPVFTPYIEIPELAQYDLKEVPIHADPDNGWQYSDAELDKLKDPDVKIFFCVN 252
Query: 118 PSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176
PSNP + LD + IVA+ P LL+L+D++Y +A + F+ P TL
Sbjct: 253 PSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYG--TFADEFQSLFSVCP---RNTL 307
Query: 177 TVNGFSKAFAMTGWRLGYIAGPKHFV 202
V FSK F TGWRLG IA K V
Sbjct: 308 LVYSFSKYFGATGWRLGVIAAHKDNV 333
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 117/285 (41%), Gaps = 18/285 (6%)
Query: 22 QFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81
F+ ++ N +++ P+ ++++ GA + + + PG+ V+IP P++ + +
Sbjct: 80 DFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRT 139
Query: 82 ATPVI-LPTRISENFLLDPKVLESKLTEKSRL------LILCSPSNPTGSVYPKNLLDEI 134
++ + S F + LE E + +++ +PSNP G+ +N L +
Sbjct: 140 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLL 199
Query: 135 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL--PGMWERTLTVNGFS-KAFAMTGWR 191
V + + ++SDEIY ++ + S + +W+R V S K + G+R
Sbjct: 200 LSFV-EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSLSXKDLGLPGFR 258
Query: 192 LGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDF 251
+G I V A S F SS +Q +++ K ++R+
Sbjct: 259 VGAIYSNDDMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKK 317
Query: 252 LVKSFGELEGVKMSEPQGAFYLFIDF-----STYYGSEAEGFGKI 291
LV + G+ + ++D S + +E E + KI
Sbjct: 318 LVSGL-QKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKI 361
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 49/299 (16%)
Query: 62 EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP------KVLESKLTEKSRLLIL 115
+VI+P P +YP + AT E +D +E +R ++L
Sbjct: 107 KVIVPTP---AYPPFFHLLSATQ-------REGIFIDATGGINLHDVEKGFQAGARSILL 156
Query: 116 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175
C+P NP G V+ L+E+ + ++ VL DEI+ +++ HT A +
Sbjct: 157 CNPYNPLGXVFAPEWLNELCDLAHRY-DARVLVDEIHAPLVF-DGQHTVAAGVSDTAASV 214
Query: 176 -LTVNGFSKAFAMTGWRLGYI-----AGPKHFVAACNKIQSQFTSGASSISQKXXXXXXX 229
+T+ S A+ + G + I + +H+ ++ GAS++
Sbjct: 215 CITITAPSXAWNIAGLKCAQIIFSNPSDAEHW----QQLSPVIKDGASTLG---LIAAEA 267
Query: 230 XXXXXXEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDF--STYYGSEAE 286
+ +++ V + DFL+ + + G K++ Q + +IDF +T GS +E
Sbjct: 268 AYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPXQATYLXWIDFRDTTIEGSPSE 327
Query: 287 GFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC--IRISYAASLTTLQAAVERIKKGL 343
+ ++KA+VA G FG+D R+++A S L+ A++R K +
Sbjct: 328 -------------FFIEKAKVAXNDGAWFGEDGTGFCRLNFATSREVLEEAIDRXAKAV 373
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 137/297 (46%), Gaps = 29/297 (9%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
K G+S D I++++G++Q++ +PGD V++ AP +++ + + + +
Sbjct: 133 KRYGISQDND-IMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQI 191
Query: 88 PTRISENFLLDPKVLESKLTE-----KSRLLILCSPS--NPTGSVYPKNLLDEIARIVAK 140
P ++ + ++LE KL E K ++ P+ NP G ++ + + ++
Sbjct: 192 PL---DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASE 248
Query: 141 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 200
+ +V+ D+ Y + Y+ +L R + + FSK A G+R+G++ G
Sbjct: 249 YD-FIVVEDDPYGELRYSGNPEKKIKALDNEG-RVIYLGTFSKILA-PGFRIGWMVGDPG 305
Query: 201 FVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGEL- 259
+ +I Q T +++ + + + ++ K ++ RRD ++++ E
Sbjct: 306 IIRKM-EIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFM 364
Query: 260 -EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315
EGVK ++P+G ++++ I++ + L R + K VA VPG+AF
Sbjct: 365 PEGVKWTKPEGGMFIWVTLPD----------GIDSKKMLERAI--KKGVAYVPGEAF 409
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 137/297 (46%), Gaps = 29/297 (9%)
Query: 28 KENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87
K G+S D I++++G++Q++ +PGD V++ AP +++ + + + +
Sbjct: 88 KRYGISQDND-IMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQI 146
Query: 88 PTRISENFLLDPKVLESKLTE-----KSRLLILCSPS--NPTGSVYPKNLLDEIARIVAK 140
P ++ + ++LE KL E K ++ P+ NP G ++ + + ++
Sbjct: 147 PL---DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASE 203
Query: 141 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 200
+ +V+ D+ Y + Y+ +L R + + FSK A G+R+G++ G
Sbjct: 204 YD-FIVVEDDPYGELRYSGNPEKKIKALDNEG-RVIYLGTFSKILA-PGFRIGWMVGDPG 260
Query: 201 FVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGEL- 259
+ +I Q T +++ + + + ++ K ++ RRD ++++ E
Sbjct: 261 IIRKM-EIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFM 319
Query: 260 -EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315
EGVK ++P+G ++++ I++ + L R + K VA VPG+AF
Sbjct: 320 PEGVKWTKPEGGMFIWVTLPD----------GIDSKKMLERAI--KKGVAYVPGEAF 364
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 135/327 (41%), Gaps = 45/327 (13%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP------------ 84
+++ VS+GA+ I + L + S + + P + +Y + + I T
Sbjct: 134 NEVFVSDGAQSDISRLQLLLGS-NVTIAVQDPTFPAYIDSSVIIGQTGHFHEKTKKYQNV 192
Query: 85 VILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 144
V +P + +F D +T ++ ++ CSP+NPTG V + L ++ AK
Sbjct: 193 VYMPCGPNNSFFPD-----LAMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDF-AKTNGS 246
Query: 145 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 204
+++ D Y I + S +PG E + V+ FSK TG RLG+ P + +
Sbjct: 247 IIIFDSAYAAFI-EDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWSIIPDELLYS 305
Query: 205 C--------NKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSF 256
++I + +GAS+I+Q + + + ++E R L+ +
Sbjct: 306 NGFPIINDFHRIVTTSFNGASNIAQ--AGGLACLSSGGLKEIRSVNNYYKENRKILMDTL 363
Query: 257 GELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF- 315
L G+K+ A YL++ F K S + +L+ + VPG F
Sbjct: 364 VSL-GLKVYGGVNAPYLWVHF------------KGSKSWDVFNEILENTHIITVPGSGFG 410
Query: 316 -GDDTCIRISYAASLTTLQAAVERIKK 341
G + +RIS + A +R++
Sbjct: 411 PGGEEYLRISGFGRRDHIVEASKRLQN 437
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 109 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168
++ ++ CSP+NPTG+ + L ++ K+ ++V D Y + + F +
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVY-DSAYAMYMSDDNPRSIF-EI 255
Query: 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA--------CNKIQSQFTSGASSIS 220
PG E + FSK TG RLG+ PK + + N+I +GAS+IS
Sbjct: 256 PGAEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNIS 315
Query: 221 QKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 277
Q E + K++ ++E + ++ +F L G + + A Y+++ F
Sbjct: 316 Q--AGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHF 369
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 140/332 (42%), Gaps = 42/332 (12%)
Query: 28 KENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPA-----PFWVSYPEMARIAD 81
+ +GL+ D +IL G+++++ V V +P + I PA PF+ Y E A +
Sbjct: 82 RYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIY-EGATLLG 140
Query: 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141
+ + +F D + + ++ ++++L+ +CSP+NP+GSV + E+ + K+
Sbjct: 141 GGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKY 200
Query: 142 PRLLVLSDEIYEHIIYAP----ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 197
++ SDE Y I + + A L ++ L S + G R G++AG
Sbjct: 201 -GFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFVAG 259
Query: 198 PKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFG 257
+ ++ S S Q+ + V + ++E+ + ++
Sbjct: 260 DAELLKNFLLYRTYHGSAXSIPVQR----ASIAAWDDEQHVIDNRRLYQEKFERVIPILQ 315
Query: 258 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESL--CRYLLDKAQVALVPGDAF 315
++ VK+ P +FY+++ K+ + + L R L KA + ++PG
Sbjct: 316 QVFDVKL--PDASFYIWL--------------KVPDGDDLAFARNLWQKAAIQVLPGRFL 359
Query: 316 GDDT--------CIRISYAASLTTLQAAVERI 339
DT +RI+ A + T A E I
Sbjct: 360 ARDTEQGNPGEGYVRIALVADVATCVKAAEDI 391
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 141/367 (38%), Gaps = 72/367 (19%)
Query: 25 INLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDE----VIIPAPFWVSYPEMARIA 80
I ++ G+ PD I ++ GA I + + S G + V+IP P + Y +
Sbjct: 142 ITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISEL 201
Query: 81 DATPVILPTRISENFLLDPK-------------VLESKLTEKSRLLILCSPSNPTGSVYP 127
DA V N+ LD + V E+K ++L + +P NPTG V
Sbjct: 202 DAIQV--------NYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQS 253
Query: 128 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT--HTSFASLPGM---WERTLTVNGF- 181
+ ++++ A +L +L+DE+Y+ +Y+P H+ L M + + + F
Sbjct: 254 RKCIEDVIHF-AWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFH 312
Query: 182 --SKAF-AMTGWRLGY---------------------IAGPKHFVAACNKIQSQFTSGAS 217
SK + G+R GY + P AA + + + +G
Sbjct: 313 STSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEE 372
Query: 218 SISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID- 276
S Q V+ + K + D F ++ G+ + QGA Y F
Sbjct: 373 SFEQ--------FSREKESVLGNLAKKAKLTEDL----FNQVPGIHCNPLQGAMYAFPRI 420
Query: 277 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC---IRISYAASLTTLQ 333
F EA ++ C LL++ + +VPG FG R++ + L+
Sbjct: 421 FIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLK 480
Query: 334 AAVERIK 340
++++K
Sbjct: 481 TVLQKVK 487
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 34/251 (13%)
Query: 27 LKENGLSY------TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80
L E LSY + + + V NGA + I +L D + P + Y A+
Sbjct: 73 LIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAV 128
Query: 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 140
A + +P D ++ E + E ++ + +P+NPTG V+ + +EI RI+ K
Sbjct: 129 GAKFLEVP------LTKDLRIPEVNVGEGD-VVFIPNPNNPTGHVFER---EEIERIL-K 177
Query: 141 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 200
+ L + YE S+ +E + FSKAF++ R+GY+ +
Sbjct: 178 TGAFVALDEAYYEF------HGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEK 231
Query: 201 FVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELE 260
F+ A N+++ F S +SQ E+ + K E R+ + + E+
Sbjct: 232 FIDAYNRVRLPF--NVSYVSQ----MFAKVALDHREIFEERTKFIVEERERMKSALREM- 284
Query: 261 GVKMSEPQGAF 271
G ++++ +G F
Sbjct: 285 GYRITDSRGNF 295
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 34/251 (13%)
Query: 27 LKENGLSY------TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80
L E LSY + + + V NGA + I +L D + P + Y A+
Sbjct: 61 LIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAV 116
Query: 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 140
A + +P D ++ E + E ++ + +P+NPTG V+ + +EI RI+ K
Sbjct: 117 GAKFLEVP------LTKDLRIPEVNVGEGD-VVFIPNPNNPTGHVFER---EEIERIL-K 165
Query: 141 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 200
+ L + YE S+ +E + FSKAF++ R+GY+ +
Sbjct: 166 TGAFVALDEAYYEF------HGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEK 219
Query: 201 FVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELE 260
F+ A N+++ F S +SQ E+ + K E R+ + + E+
Sbjct: 220 FIDAYNRVRLPF--NVSYVSQ----MFAKVALDHREIFEERTKFIVEERERMKSALREM- 272
Query: 261 GVKMSEPQGAF 271
G ++++ +G F
Sbjct: 273 GYRITDSRGNF 283
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 109 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168
++ ++ CSP+NPTG+ + L ++ K+ ++V D Y + + F +
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVY-DSAYAMYMSDDNPRSIF-EI 255
Query: 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA--------CNKIQSQFTSGASSIS 220
PG E + FS+ TG RLG+ PK + + N+I +GAS+IS
Sbjct: 256 PGAEEVAMETASFSQYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNIS 315
Query: 221 QKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 277
Q E + K++ ++E + ++ +F L G + + A Y+++ F
Sbjct: 316 Q--AGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHF 369
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 109 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168
++ ++ CSP+NPTG+ + L ++ K+ ++V D Y + + F +
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVY-DSAYAMYMSDDNPRSIF-EI 255
Query: 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA--------CNKIQSQFTSGASSIS 220
PG E + FS TG RLG+ PK + + N+I +GAS+IS
Sbjct: 256 PGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNIS 315
Query: 221 QKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 277
Q E + K++ ++E + ++ +F L G + + A Y+++ F
Sbjct: 316 Q--AGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHF 369
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 109 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168
++ ++ CSP+NPTG+ + L ++ K+ ++V D Y + F +
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVY-DSAYAXYXSDDNPRSIF-EI 255
Query: 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA--------CNKIQSQFTSGASSIS 220
PG E FSK TG RLG+ PK + + N+I +GAS+IS
Sbjct: 256 PGAEEVAXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNIS 315
Query: 221 QKXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 277
Q E K++ ++E + ++ +F L G + + A Y+++ F
Sbjct: 316 Q--AGALACLTPEGLEAXHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHF 369
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 94
+ + + V NGA + I L D + P + Y A+ A + +P
Sbjct: 75 SKNNVSVGNGADEIIYVXXLXF----DRSVFFPPTYSCYRIFAKAVGAKFLEVP------ 124
Query: 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154
D ++ E + E ++ + +P+NPTG V+ + +EI RI+ K + L + YE
Sbjct: 125 LTKDLRIPEVNVGEGD-VVFIPNPNNPTGHVFER---EEIERIL-KTGAFVALDEAYYEF 179
Query: 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 214
S+ +E + FSKAF++ R+GY+ + F+ A N+++ F
Sbjct: 180 ------HGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPF-- 231
Query: 215 GASSISQ 221
S +SQ
Sbjct: 232 NVSYVSQ 238
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQ--AVLAVCSPGDEVIIPAPFWVSYPEM 76
F ++F I LKEN +++ + G+++ + + + + P PF+ Y
Sbjct: 72 FKRRFKIELKEN-------ELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGA 124
Query: 77 ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 136
A+ A ++ P +F P + E +L E L+IL SP+NPTG L +
Sbjct: 125 AKFIKAKSLLXPLTKENDF--TPSLNEKELQEVD-LVILNSPNNPTGRTLSLEELISWVK 181
Query: 137 IVAKHPRLLVLSDEIYEHII--YAPATHTSFASLPG--MWERTLTVNGFSKAFAMTGWRL 192
+ KH +L+ +DE Y I P + L G ++ L ++ SK + G R
Sbjct: 182 LALKHDFILI-NDECYSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRS 240
Query: 193 GYIAGPKHFVAACNKIQSQFTSGASSISQK 222
G+IAG + ++ +++ QK
Sbjct: 241 GFIAGDSRLLEKYKAFRAYLGYTSANAIQK 270
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 129/320 (40%), Gaps = 42/320 (13%)
Query: 30 NGLSYTPDQILVSNGAKQSI-LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88
+G D I +++GA + L L + + D +++P P + Y A IA ++P
Sbjct: 151 DGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYS--ASIALHGGALVP 208
Query: 89 TRISEN--FLLDPKVLESKLTEKS------RLLILCSPSNPTGSVYPKNLLDEIARIVAK 140
++E+ + L+ ++ +L + R L++ +P NPTG V + +I + K
Sbjct: 209 YYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKF-CK 267
Query: 141 HPRLLVLSDEIYEHIIYAPATHTSFASLP------GMWERTLTVNGFSKA----FAMTGW 190
+ L++L+DE+Y+ IY + F S G E L + + + G
Sbjct: 268 NEGLVLLADEVYQENIY--VDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGK 325
Query: 191 RLGY-----IAGPKH-------FVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVV 238
R GY + P V C+ I Q +S+
Sbjct: 326 RGGYFEITGFSAPVREQIYKIASVNLCSNITGQIL---ASLVMNPPKASDESYASYKAEK 382
Query: 239 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIENSES 296
++ + R L +F +LEG+ +E +GA Y+F I A+ K ++
Sbjct: 383 DGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFY 442
Query: 297 LCRYLLDKAQVALVPGDAFG 316
R LL+ + +VPG FG
Sbjct: 443 ALR-LLESTGIVVVPGSGFG 461
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
Query: 60 GDEVIIPAPFWVSYPEMARIADAT--PVILPTRISENFLLDPKVLESKLTE-KSRLLILC 116
G+ V+I P + ++ + T PV L + ++ + D LE+ L + + ++++LC
Sbjct: 111 GEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQ-ADGWFCDMGKLEAVLAKPECKIMLLC 169
Query: 117 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERT 175
SP NPTG V+ + L+ +A + +H + V+SDEI+ +++ H ++++ G W
Sbjct: 170 SPQNPTGKVWTCDELEIMADLCERHG-VRVISDEIHMDMVWGEQPHIPWSNVARGDW--A 226
Query: 176 LTVNGFSKAF---AMTG 189
L +G SK+F A+TG
Sbjct: 227 LLTSG-SKSFNIPALTG 242
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 64 IIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 123
+ P +V Y + A I A +P + ++ D + + + EK+ ++ +C+P+NPTG
Sbjct: 112 VXATPTFVQYRQNALIEGAEVREIP--LLQDGEHDLEGXLNAIDEKTTIVWICNPNNPTG 169
Query: 124 SVYPKNLLDEIARIVAKHPR-LLVLSDEIY-EHIIYAPATHTSFASLPGMWERTLTVNGF 181
+ L +I + + P +LV+ DE Y E++ P H ++ + F
Sbjct: 170 NYIE---LADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVR---TYKNLIITRTF 223
Query: 182 SKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKXXXXXXXXXXXXXEVVSKM 241
SK + + R+GY K + N ++ F + +SI QK E +
Sbjct: 224 SKIYGLASARVGYGIADKEIIRQLNIVRPPFNT--TSIGQKLAIEAIKDQAFIGECRTSN 281
Query: 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 301
++ F K F E VK+ G F L ID G+ F +E + + R
Sbjct: 282 ANGIKQYEAF-AKRF---EKVKLYPANGNFVL-IDLGIEAGT---IFSYLEKNGYITR-- 331
Query: 302 LDKAQVALVPGDAFGDDTCIRIS 324
G A G T +RI+
Sbjct: 332 ---------SGAALGFPTAVRIT 345
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE 93
+ P I+ +NG+ + + + A + G+E+ P + Y +A + A + ++
Sbjct: 80 FDPSWIIXANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGAR--VRTFGLTG 137
Query: 94 NFLLD--PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151
+F + P+ E K+ L +P+ P G +P +DE+AR A LVL +
Sbjct: 138 DFRIAGFPERYEGKV------FFLTTPNAPLGPSFPLEYIDELARRCAG---XLVLDE-- 186
Query: 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 211
YA ++ L E + SK++++ G R+G +AA +KI+
Sbjct: 187 ----TYAEFAESNALELVRRHENVVVTRTLSKSYSLAGXRIGLAIARPEVIAALDKIRDH 242
Query: 212 FT 213
+
Sbjct: 243 YN 244
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 39 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 98
IL++ G+ + I A+ A S +++IP + A+IA + + +N+ D
Sbjct: 71 ILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGXK--VTKVKXLDNWAFD 128
Query: 99 PKVLESKLTEKS--RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156
+ L++ + S ++ L +P+NPTG++ P ++++ I +K + DE Y +
Sbjct: 129 IEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPW--IASKPANTXFIVDEAYAEFV 186
Query: 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 194
P + + E + + FSK A G R+GY
Sbjct: 187 NDPRFRSISPXITQGAENIILLKTFSKIHAXAGXRVGY 224
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96
+ ILV+NG + Q +A G +I P + Y + R + P+
Sbjct: 68 NAILVTNGPTAAFYQ--IAQAFRGSRSLIAIPSFAEYEDACRXYEHEVCFYPS------- 118
Query: 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156
+ + E+ + LC+P+NP G + + EI R++ HP + D+ Y +
Sbjct: 119 -NEDIGEADFSNXD-FCWLCNPNNPDGRLLQRT---EILRLLNDHPDTTFVLDQSY--VS 171
Query: 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 201
+ A + G + + V FS A+ + G R+GYI K F
Sbjct: 172 FTTEEVIRPADIKGR-KNLVXVYSFSHAYGIPGLRIGYIVANKDF 215
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 113 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF-ASLPGM 171
++L +PSNPTG LD++ + K +L DE Y ++SF A
Sbjct: 139 VVLANPSNPTGQALSAGELDQLRQRAGK-----LLIDETY-------VDYSSFRARGLAY 186
Query: 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 209
E L FSK++ + G RLG + GP +AA + Q
Sbjct: 187 GENELVFRSFSKSYGLAGLRLGALFGPSELIAAXKRKQ 224
>pdb|2C7T|A Chain A, Crystal Structure Of The Plp-Bound Form Of Btrr, A Dual
Functional Aminotransferase Involved In Butirosin
Biosynthesis.
pdb|2C81|A Chain A, Crystal Structures Of The Plp- And Pmp-Bound Forms Of
Btrr, A Dual Functional Aminotransferase Involved In
Butirosin Biosynthesis
Length = 418
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 60 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 119
GDEVI+P+ W++ +A PV + ++ + +DP++++S +T+K++ +I P
Sbjct: 82 GDEVIVPSLTWIATATAVLNVNALPVFVDVE-ADTYCIDPQLIKSAITDKTKAII---PV 137
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154
+ GS+ +DEI I +H L V+ D H
Sbjct: 138 HLFGSMAN---MDEINEIAQEH-NLFVIEDCAQSH 168
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 16 LWSFVQQFVINLKEN-GLSYTPDQ----ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 70
L S+++Q I L + Y P Q + V++G++Q + + + +PGD V++ P +
Sbjct: 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY 142
Query: 71 VS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR---LLILCSPS 119
+P + +A I+P + + L K ++K +K+ L + + +
Sbjct: 143 SGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQKNTPKFLYTVPNGN 201
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179
NPTG+ EI + K+ L++ D+ Y + + +F S+ + R + +
Sbjct: 202 NPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNSGRVPTFLSM-DVDGRVIRAD 259
Query: 180 GFSKAFAMTGWRLGYIAGPKHFV 202
FSK + +G R+G++ GPK +
Sbjct: 260 SFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 16 LWSFVQQFVINLKEN-GLSYTPDQ----ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 70
L S+++Q I L + Y P Q + V++G++Q + + + +PGD V++ P +
Sbjct: 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGDNVLLDEPAY 142
Query: 71 VS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR---LLILCSPS 119
+P + +A I+P + + L K ++K +K+ L + + +
Sbjct: 143 SGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQKNTPKFLYTVPNGN 201
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179
NPTG+ EI + K+ L++ D+ Y + + +F S+ + R + +
Sbjct: 202 NPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNSGRVPTFLSM-DVDGRVIRAD 259
Query: 180 GFSKAFAMTGWRLGYIAGPKHFV 202
FSK + +G R+G++ GPK +
Sbjct: 260 SFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 29 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88
EN L I++ NGA + I ++ S ++++I P + Y A+ + V
Sbjct: 71 ENYLKLKDIGIVLGNGASEIIELSI----SLFEKILIIVPSYAEYEINAKKHGVSVVF-- 124
Query: 89 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148
+ + EN +D + + SK+ + ++I +P+NP G + K + ++ + + +++
Sbjct: 125 SYLDENMCIDYEDIISKIDDVDSVII-GNPNNPNGGLINKEKFIHVLKLAEEKKKTIIID 183
Query: 149 DEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 194
+ E + +SF + + +K FAM G R GY
Sbjct: 184 EAFIE---FTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGY 226
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 29/231 (12%)
Query: 98 DPKVLESKLTEKSR---------LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148
D VLE KL+E + + ++ + NP G + I K+ L ++
Sbjct: 168 DLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYD-LFIVE 226
Query: 149 DEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 208
D+ Y + Y T + G ER + +N FSK A G R+G +AG K F+ +
Sbjct: 227 DDPYGALRYEGETVDPIFKIGGP-ERVVLLNTFSKVLA-PGLRIGXVAGSKEFIRKIVQA 284
Query: 209 QSQFTSGASSISQKXXXXXXXXXXXXXEVVSKMVKAFRERR----DFLVKSFGELEGVKM 264
+ + +I+ + E + ++ +R +R + L + F ++ GVK
Sbjct: 285 KQSADLCSPAITHR-LAARYLERYDLLEQLKPTIELYRRKRTVXLNALEEYFSDIPGVKW 343
Query: 265 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315
+ +G ++++ EGF E E R +V VPG F
Sbjct: 344 VKSEGGLFIWLTL-------PEGFDTWEXFEYAKR-----KKVFYVPGRVF 382
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 16 LWSFVQQFVINLKEN-GLSYTPDQ----ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 70
L S+++Q I L + Y P Q + V++G++Q + + + +PGD V++ P +
Sbjct: 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY 142
Query: 71 VS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR---LLILCSPS 119
+P + +A I+P + + L K ++K +K+ L + + +
Sbjct: 143 SGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQKNTPKFLYTVPNGN 201
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179
NPTG+ EI + K+ L++ D+ Y + + +F S+ + R + +
Sbjct: 202 NPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFLSM-DVDGRVIRAD 259
Query: 180 GFSKAFAMTGWRLGYIAGPKHFV 202
FSK + +G R+G++ GPK +
Sbjct: 260 SFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 16 LWSFVQQFVINLKEN-GLSYTPDQ----ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 70
L S+++Q I L + Y P Q + V++G++Q + + + +PGD V++ P +
Sbjct: 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY 142
Query: 71 VS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR---LLILCSPS 119
+P + +A I+P + + L K ++K +K+ L + + +
Sbjct: 143 SGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQKNTPKFLYTVPNGN 201
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179
NPTG+ EI + K+ L++ D+ Y + + +F S+ + R + +
Sbjct: 202 NPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFLSM-DVDGRVIRAD 259
Query: 180 GFSKAFAMTGWRLGYIAGPKHFV 202
FSK + +G R+G++ GPK +
Sbjct: 260 SFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 16 LWSFVQQFVINLKEN-GLSYTPDQ----ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 70
L S+++Q I L + Y P Q + V++G++Q + + + +PGD V++ P +
Sbjct: 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY 142
Query: 71 VS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR---LLILCSPS 119
+P + +A I+P + + L K ++K +K+ L + + +
Sbjct: 143 SGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQKNTPKFLYTVPNGN 201
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179
NPTG+ EI + K+ L++ D+ Y + + +F S+ + R + +
Sbjct: 202 NPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFLSM-DVDGRVIRAD 259
Query: 180 GFSKAFAMTGWRLGYIAGPKHFV 202
FSK + +G R+G++ GPK +
Sbjct: 260 SFSKIIS-SGLRIGFLTGPKPLI 281
>pdb|3DR4|A Chain A, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|B Chain B, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|C Chain C, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
pdb|3DR4|D Chain D, Gdp-Perosamine Synthase K186a Mutant From Caulobacter
Crescentus With Bound Sugar Ligand
Length = 391
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 13 MRVLW-SFVQQFVINLKENGLSY--TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 69
M W S V +F++ ++ Y I +NG L V PGDEVI+P+
Sbjct: 46 MDTTWISSVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLT 105
Query: 70 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 129
+++ ATPV++ F LD LE+ +T +++ ++ P + G + +
Sbjct: 106 YIASANSVTYCGATPVLVDND-PRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMD 161
Query: 130 LLDEIARIVAKHPRLLVLSD 149
+ E+AR +H LLV+ D
Sbjct: 162 PILEVAR---RH-NLLVIED 177
>pdb|3DR7|A Chain A, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|B Chain B, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|C Chain C, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
pdb|3DR7|D Chain D, Gdp-perosamine Synthase From Caulobacter Crescentus With
Bound Gdp-3-deoxyperosamine
Length = 391
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 13 MRVLW-SFVQQFVINLKENGLSY--TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 69
M W S V +F++ ++ Y I +NG L V PGDEVI+P+
Sbjct: 46 MDTTWISSVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLT 105
Query: 70 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 129
+++ ATPV++ F LD LE+ +T +++ ++ P + G + +
Sbjct: 106 YIASANSVTYCGATPVLVDND-PRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMD 161
Query: 130 LLDEIARIVAKHPRLLVLSD 149
+ E+AR +H LLV+ D
Sbjct: 162 PILEVAR---RH-NLLVIED 177
>pdb|3BN1|A Chain A, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|B Chain B, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|C Chain C, Crystal Structure Of Gdp-Perosamine Synthase
pdb|3BN1|D Chain D, Crystal Structure Of Gdp-Perosamine Synthase
Length = 373
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 13 MRVLW-SFVQQFVINLKENGLSY--TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 69
M W S V +F++ ++ Y I +NG L V PGDEVI+P+
Sbjct: 28 MDTTWISSVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLT 87
Query: 70 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 129
+++ ATPV++ F LD LE+ +T +++ ++ P + G + +
Sbjct: 88 YIASANSVTYCGATPVLVDND-PRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMD 143
Query: 130 LLDEIARIVAKHPRLLVLSD 149
+ E+AR +H LLV+ D
Sbjct: 144 PILEVAR---RH-NLLVIED 159
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 90 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149
R ++ + L +LE+ LT L LC+P+NPTG + + LL IA L+L +
Sbjct: 128 READGWQLTDAILEA-LTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDE 186
Query: 150 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 195
+ I + + P +W + +K +A+ G RLGY+
Sbjct: 187 AFIDFIPHETGFIPALKDNPHIW----VLRSLTKFYAIPGLRLGYL 228
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 16 LWSFVQQFVINLKEN-GLSYTPDQ----ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 70
L S+++Q I L + Y P Q + V++G++Q + + + +PGD V++ P +
Sbjct: 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY 142
Query: 71 VS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR---LLILCSPS 119
+P + +A I+P + + L K ++K +K+ L + + +
Sbjct: 143 SGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQKNTPKFLYTVPNGN 201
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179
NPTG+ EI + K+ L++ D+ Y + + +F S+ + R + +
Sbjct: 202 NPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFLSM-DVDGRVIRAD 259
Query: 180 GFSKAFAMTGWRLGYIAGPKHFV 202
FS + +G R+G++ GPK +
Sbjct: 260 SFSXIIS-SGLRIGFLTGPKPLI 281
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 16 LWSFVQQFVINLKEN-GLSYTPDQ----ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW 70
L S+++Q I L + Y P Q + V++G++Q + + + +PGD V++ P +
Sbjct: 85 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAY 144
Query: 71 VS-----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR---LLILCSPS 119
+P + +A I+P + + L K ++K +K+ L + + +
Sbjct: 145 SGTLQSLHPLGCNIINVASDESGIVPDSL-RDILSRWKPEDAKNPQKNTPKFLYTVPNGN 203
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179
NPTG+ EI + K+ L++ D+ Y + + +F S+ + R + +
Sbjct: 204 NPTGNSLTSERKKEIYELARKY-DFLIIEDDPYYFLQFNKFRVPTFLSM-DVDGRVIRAD 261
Query: 180 GFSKAFAMTGWRLGYIAGPKHFV 202
FS + +G R+G++ GPK +
Sbjct: 262 SFSXIIS-SGLRIGFLTGPKPLI 283
>pdb|3NU7|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Cofactor Pmp
pdb|3NU7|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Cofactor Pmp
pdb|3NUB|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With Product
As The External Aldimine
pdb|3NUB|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With Product
As The External Aldimine
Length = 359
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 39 ILVSNGAKQ-SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
I +NG I+Q L V PGDEVI P +V+ E + A PV + + L
Sbjct: 54 ISCANGTDALQIVQMALGV-GPGDEVITPGFTYVATAETVALLGAKPVYVDID-PRTYNL 111
Query: 98 DPKVLESKLTEKSRLLI 114
DP++LE+ +T +++ +I
Sbjct: 112 DPQLLEAAITPRTKAII 128
>pdb|3NU8|A Chain A, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Internal Aldimine
pdb|3NU8|B Chain B, Wbpe, An Aminotransferase From Pseudomonas Aeruginosa
Involved In O- Antigen Assembly In Complex With The
Internal Aldimine
Length = 359
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 39 ILVSNGAKQ-SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
I +NG I+Q L V PGDEVI P +V+ E + A PV + + L
Sbjct: 54 ISCANGTDALQIVQMALGV-GPGDEVITPGFTYVATAETVALLGAKPVYVDID-PRTYNL 111
Query: 98 DPKVLESKLTEKSRLLI 114
DP++LE+ +T +++ +I
Sbjct: 112 DPQLLEAAITPRTKAII 128
>pdb|3NYU|A Chain A, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|B Chain B, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|C Chain C, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
pdb|3NYU|D Chain D, X-Ray Crystal Structure Of The Wbpe (Wlbe)
Aminotransferase From Pseudomonas Aeruginosa As The Plp
Internal Aldimine Adduct With Lysine 185
Length = 367
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 39 ILVSNGAKQ-SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
I +NG I+Q L V PGDEVI P +V+ E + A PV + + L
Sbjct: 54 ISCANGTDALQIVQMALGV-GPGDEVITPGFTYVATAETVALLGAKPVYVDID-PRTYNL 111
Query: 98 DPKVLESKLTEKSRLLI 114
DP++LE+ +T +++ +I
Sbjct: 112 DPQLLEAAITPRTKAII 128
>pdb|3NYS|A Chain A, X-Ray Structure Of The K185a Mutant Of Wbpe (Wlbe) From
Pseudomonas Aeruginosa In Complex With Plp At 1.45
Angstrom Resolution
pdb|3NYT|A Chain A, X-Ray Crystal Structure Of The Wlbe (Wpbe)
Aminotransferase From Pseudomonas Aeruginosa, Mutation
K185a, In Complex With The Plp External Aldimine Adduct
With Udp-3-Amino-2-N-Acetyl-Glucuronic Acid, At 1.3
Angstrom Resolution
Length = 367
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 39 ILVSNGAKQ-SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97
I +NG I+Q L V PGDEVI P +V+ E + A PV + + L
Sbjct: 54 ISCANGTDALQIVQMALGV-GPGDEVITPGFTYVATAETVALLGAKPVYVDID-PRTYNL 111
Query: 98 DPKVLESKLTEKSRLLI 114
DP++LE+ +T +++ +I
Sbjct: 112 DPQLLEAAITPRTKAII 128
>pdb|3FRK|A Chain A, X-Ray Structure Of Qdtb From T. Thermosaccharolyticum In
Complex With A Plp:tdp-3-Aminoquinovose Aldimine
pdb|3FRK|B Chain B, X-Ray Structure Of Qdtb From T. Thermosaccharolyticum In
Complex With A Plp:tdp-3-Aminoquinovose Aldimine
Length = 373
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 60 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 119
GDEVI+P+ +++ A P+ + I + +DP ++ES +TEK++ +I
Sbjct: 76 GDEVIVPSNTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAIIAVHLY 134
Query: 120 NPTGSVYPKNLLDEIARIVAKHPRLLV 146
+DEI RI K+ L+
Sbjct: 135 GQPAD------MDEIKRIAKKYNLKLI 155
>pdb|3UWC|A Chain A, Structure Of An Aminotransferase (Degt-Dnrj-Eryc1-Strs
Family) From Coxiella Burnetii In Complex With Pmp
Length = 374
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD 61
+F++ + TL L F ++F L P I V G GD
Sbjct: 27 EFIKTADFTLGAE-LEKFEKRFA------ALHNAPHAIGVGTGTDALAXSFKXLNIGAGD 79
Query: 62 EVIIPAPFWVSYPEMARIADATPVILPTRISEN-FLLDPKVLESKLTEKSRLLILCSPSN 120
EVI A +++ A ATPV++ SEN +++DP+ +E+ +T+K++ + P +
Sbjct: 80 EVITCANTFIASVGAIVQAGATPVLVD---SENGYVIDPEKIEAAITDKTKAI---XPVH 133
Query: 121 PTGSVYPKNLLDEIARIVAKHPRLLVLSD 149
TG++ L A+I KH L ++ D
Sbjct: 134 YTGNIADXPAL---AKIAKKH-NLHIVED 158
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 6/179 (3%)
Query: 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96
+ I++ G+ Q I A+ + + + + + Y A+ A I+ N
Sbjct: 83 ENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQCGA-KCYKTQSITHNLD 141
Query: 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI- 155
K+ E+ E +L+ LC P+NP G + E + V + LV+ D Y
Sbjct: 142 EFKKLYETHKDE-IKLIFLCLPNNPLGECLDASEATEFIKGV--NEDCLVVIDAAYNEFA 198
Query: 156 -IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 213
H L ++ L + FS + + G R+GY + ++A K+++ F
Sbjct: 199 SFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGIANANIISAFYKLRAPFN 257
>pdb|1MDX|A Chain A, Crystal Structure Of Arnb Transferase With Pyridoxal 5'
Phosphate
pdb|1MDZ|A Chain A, Crystal Structure Of Arnb Aminotransferase With
Cycloserine And Pyridoxal 5' Phosphate
Length = 393
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 60 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 114
GDEVI P+ WVS M + A PV++ + ++ P+ +E+ +T +++ +I
Sbjct: 79 GDEVITPSMTWVSTLNMIVLLGANPVMVDVD-RDTLMVTPEHIEAAITPQTKAII 132
>pdb|2OGE|A Chain A, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|B Chain B, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|C Chain C, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
pdb|2OGE|D Chain D, X-Ray Structure Of S. Venezuelae Desv In Its Internal
Aldimine Form
Length = 399
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 58 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF-LLDPKVLESKLTEKSRLLI 114
PGDEVI+P+ +++ ATPV P E+ LDP ++E +T ++R L+
Sbjct: 101 GPGDEVIVPSHTYIASWLAVSATGATPV--PVEPHEDHPTLDPLLVEKAITPRTRALL 156
>pdb|2OGA|A Chain A, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|B Chain B, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|C Chain C, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
pdb|2OGA|D Chain D, X-Ray Crystal Structure Of S. Venezuelae Desv In Complex
With Ketimine Intermediate
Length = 399
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 58 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF-LLDPKVLESKLTEKSRLLI 114
PGDEVI+P+ +++ ATPV P E+ LDP ++E +T ++R L+
Sbjct: 101 GPGDEVIVPSHTYIASWLAVSATGATPV--PVEPHEDHPTLDPLLVEKAITPRTRALL 156
>pdb|3FEC|A Chain A, Crystal Structure Of Human Glutamate Carboxypeptidase Iii
(GcpiiiNAALADASE II), PSEUDO-Unliganded
pdb|3FED|A Chain A, The High Resolution Structure Of Human Glutamate
Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
WITH A TRANSITION STATE ANALOG OF Glu-Glu
pdb|3FEE|A Chain A, The High Resolution Structure Of Human Glutamate
Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
WITH QUISQUALIC ACID
pdb|3FF3|A Chain A, The High Resolution Structure Of Human Glutamate
Carboxypeptidase Iii (GcpiiiNAALADASE II) IN COMPLEX
WITH L-Glutamate
Length = 707
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 152 YEHIIYAPATHTSFA--SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 209
Y HII+AP++H +A S PG+++ + + + RL + KH A IQ
Sbjct: 644 YRHIIFAPSSHNKYAGESFPGIYDAIFDIENKANS------RLAWKEVKKHISIAAFTIQ 697
Query: 210 S 210
+
Sbjct: 698 A 698
>pdb|2C6C|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) In
Complex With Gpi-18431
(S)-2-(4-Iodobenzylphosphonomethyl)- Pentanedioic Acid
pdb|2C6P|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) In
Complex With Phosphate Anion
pdb|2JBJ|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) In
Complex With 2-Pmpa (2-Phosphonomethyl-Pentanedioic
Acid)
pdb|2JBK|A Chain A, Membrane-bound Glutamate Carboxypeptidase Ii (gcpii) In
Complex With Quisqualic Acid (quisqualate,
Alpha-amino-3,5- Dioxo-1,2,4-oxadiazolidine-2-propanoic
Acid)
pdb|2C6G|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) With
Bound Glutamate
pdb|2CIJ|A Chain A, Membrane-Bound Glutamate Carboxypeptidase Ii (Gcpii) With
Bound Methionine
Length = 707
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 151 IYEHIIYAPATHTSFA--SLPGMWERTLTV 178
Y H+IYAP++H +A S PG+++ +
Sbjct: 643 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 672
>pdb|3BXM|A Chain A, Structure Of An Inactive Mutant Of Human Glutamate
Carboxypeptidase Ii [gcpii(E424a)] In Complex With
N-Acetyl-Asp-Glu (Naag)
pdb|3SJE|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii
(The E424a Inactive Mutant) In Complex With
N-Acetyl-Aspartyl-Aminononanoic Acid
pdb|3SJG|A Chain A, Human Glutamate Carboxypeptidase Ii (E424a Inactive Mutant
) In Complex With N-Acetyl-Aspartyl-Aminooctanoic Acid
pdb|3SJX|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii
(The E424a Inactive Mutant) In Complex With
N-Acetyl-Aspartyl-Methionine
Length = 709
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 151 IYEHIIYAPATHTSFA--SLPGMWERTLTV 178
Y H+IYAP++H +A S PG+++ +
Sbjct: 645 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 674
>pdb|2OOT|A Chain A, A High Resolution Structure Of Ligand-Free Human Glutamate
Carboxypeptidase Ii
pdb|2OR4|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii In Complex With Quisqualic Acid
pdb|2PVV|A Chain A, Structure Of Human Glutamate Carboxypeptidase Ii (Gcpii)
In Complex With L-Serine-O-Sulfate
pdb|2PVW|A Chain A, A High Resolution Structure Of Human Glutamate
Carboxypeptidase Ii (Gcpii) In Complex With
2-(Phosphonomethyl)pentanedioic Acid (2-Pmpa)
pdb|3BHX|A Chain A, X-ray Structure Of Human Glutamate Carboxypeptidase Ii
(gcpii) In Complex With A Transition State Analog Of
Asp-glu
pdb|3BI0|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii
(Gcpii) In Complex With A Transition State Analog Of
Glu-Glu
pdb|3BI1|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii
(Gcpii) In Complex With A Transition State Analog Of
Methotrexate-Glu
pdb|3D7D|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii (gcpii) In A Complex With Dcfbd, A
Urea-based Inhibitor
pdb|3D7F|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii (Gcpii) In A Complex With Dcit, A
Urea-Based Inhibitor
pdb|3D7G|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii (Gcpii) In A Complex With Dcmc, A
Urea-Based Inhibitor
pdb|3D7H|A Chain A, A High Resolution Crystal Structure Of Human Glutamate
Carboxypeptidase Ii (Gcpii) In A Complex With Dcibzl, A
Urea-Based Inhibitor
pdb|3IWW|A Chain A, Crystal Structure Of Human Glutamate Carboxypeptidase Ii
(Gcpii) In A Complex With Dbibzl, A Urea-Based Inhibitor
pdb|2XEI|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With
Antibody-Recruiting Molecule Arm-P2
pdb|3SJF|A Chain A, X-Ray Structure Of Human Glutamate Carboxypeptidase Ii In
Complex With A Urea-Based Inhibitor (A25)
Length = 709
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 151 IYEHIIYAPATHTSFA--SLPGMWERTLTV 178
Y H+IYAP++H +A S PG+++ +
Sbjct: 645 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 674
>pdb|1Z8L|A Chain A, Crystal Structure Of Prostate-Specific Membrane Antigen, A
Tumor Marker And Peptidase
pdb|1Z8L|B Chain B, Crystal Structure Of Prostate-Specific Membrane Antigen, A
Tumor Marker And Peptidase
pdb|1Z8L|C Chain C, Crystal Structure Of Prostate-Specific Membrane Antigen, A
Tumor Marker And Peptidase
pdb|1Z8L|D Chain D, Crystal Structure Of Prostate-Specific Membrane Antigen, A
Tumor Marker And Peptidase
Length = 695
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 151 IYEHIIYAPATHTSFA--SLPGMWERTLTV 178
Y H+IYAP++H +A S PG+++ +
Sbjct: 631 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 660
>pdb|2XEF|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With
Antibody-Recruiting Molecule Arm-P8
pdb|2XEG|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With
Antibody-Recruiting Molecule Arm-P4
pdb|2XEJ|A Chain A, Human Glutamate Carboxypeptidase Ii In Complex With
Arm-M4, Urea-Based Inhibitor
Length = 709
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 151 IYEHIIYAPATHTSFA--SLPGMWERTLTV 178
Y H+IYAP++H +A S PG+++ +
Sbjct: 645 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 674
>pdb|3RBU|A Chain A, N-Terminally Avitev-Tagged Human Glutamate
Carboxypeptidase Ii In Complex With 2-Pmpa
Length = 739
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 151 IYEHIIYAPATHTSFA--SLPGMWERTLTV 178
Y H+IYAP++H +A S PG+++ +
Sbjct: 675 FYRHVIYAPSSHNKYAGESFPGIYDALFDI 704
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
From Sulfolobus Solfataricus
Length = 558
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 127 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 186
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKVGY-NIDAQW-----VDDFHHSIH 315
Query: 187 --MTGWRLGY 194
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|1B9I|A Chain A, Crystal Structure Of 3-Amino-5-Hydroxybenzoic Acid (Ahba)
Synthase
Length = 388
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 41 VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDP 99
V+NG L + PG EVI+PA ++S + A+ A V +P + + + LDP
Sbjct: 59 VTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGA--VTVPVDVDAATYNLDP 116
Query: 100 KVLESKLTEKSRLLI 114
+ + + +T ++++++
Sbjct: 117 EAVAAAVTPRTKVIM 131
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus
Glycosyltrehalose Trehalohydrolase
pdb|3VGB|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(Gthase) From Sulfolobus Solfataricus Km1
Length = 558
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 127 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 186
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGY-NIDAQW-----VDDFHHSIH 315
Query: 187 --MTGWRLGY 194
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase
(D252e)
Length = 558
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 127 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 186
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGY-NIDAQW-----VDDFHHSIH 315
Query: 187 --MTGWRLGY 194
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|1B9H|A Chain A, Crystal Structure Of 3-Amino-5-Hydroxybenzoic Acid (Ahba)
Synthase
Length = 388
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 41 VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDP 99
V+NG L + PG EVI+PA ++S + A+ A V +P + + + LDP
Sbjct: 59 VTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGA--VTVPVDVDAATYNLDP 116
Query: 100 KVLESKLTEKSRLLI 114
+ + + +T ++++++
Sbjct: 117 EAVAAAVTPRTKVIM 131
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(E283q) Complexed With Maltoheptaose
pdb|3VGH|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(E283q) Complexed With Maltotriosyltrehalose
Length = 558
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 127 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 186
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAQSDLNDPRVVNPKEKCGY-NIDAQW-----VDDFHHSIH 315
Query: 187 --MTGWRLGY 194
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(D252s)
pdb|3VGF|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase
(D252s) Complexed With Maltotriosyltrehalose
Length = 558
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 127 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 186
PK++L+EIA +V K+ R+++ ++ + + P + ++ W V+ F +
Sbjct: 262 PKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGY-NIDAQW-----VDDFHHSIH 315
Query: 187 --MTGWRLGY 194
+TG R GY
Sbjct: 316 AYLTGERQGY 325
>pdb|1MDO|A Chain A, Crystal Structure Of Arnb Aminotransferase With Pyridomine
5' Phosphate
Length = 393
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 60 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 114
GDEVI P+ WVS + A PV + + + P+ +E+ +T +++ +I
Sbjct: 79 GDEVITPSXTWVSTLNXIVLLGANPVXVDVD-RDTLXVTPEHIEAAITPQTKAII 132
>pdb|2FM1|A Chain A, Crystal Structure Of L-allo-threonine Aldolase (tm1744)
From Thermotoga Maritima At 2.25 A Resolution
pdb|2FM1|B Chain B, Crystal Structure Of L-allo-threonine Aldolase (tm1744)
From Thermotoga Maritima At 2.25 A Resolution
pdb|2FM1|C Chain C, Crystal Structure Of L-allo-threonine Aldolase (tm1744)
From Thermotoga Maritima At 2.25 A Resolution
pdb|2FM1|D Chain D, Crystal Structure Of L-allo-threonine Aldolase (tm1744)
From Thermotoga Maritima At 2.25 A Resolution
Length = 355
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 52 AVLAVCSPGDEVIIPAP---FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 108
+++A GDEVI+ A FW MA ++ P +P + N +DP + +
Sbjct: 77 SIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGK---NGAMDPDDVRKAIRP 133
Query: 109 K-------SRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141
+ S + I + + G V P + EI I +H
Sbjct: 134 RNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEH 173
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 10/139 (7%)
Query: 62 EVIIPAPFWVSYPEMARIA----DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 117
+V +P P W ++ + R A A P S +F + + SK+ EKS +L+
Sbjct: 125 DVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDI-SKIPEKSIILLHAC 183
Query: 118 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 177
NPTG + E+A +V K LL D Y+ ++A L E+ +
Sbjct: 184 AHNPTGVDPRQEQWKELASVVKKR-NLLAYFDMAYQGFASGDINRDAWA-LRHFIEQGID 241
Query: 178 V---NGFSKAFAMTGWRLG 193
V ++K + G R G
Sbjct: 242 VVLSQSYAKNMGLYGERAG 260
>pdb|1JG8|A Chain A, Crystal Structure Of Threonine Aldolase (Low-Specificity)
pdb|1JG8|B Chain B, Crystal Structure Of Threonine Aldolase (Low-Specificity)
pdb|1JG8|C Chain C, Crystal Structure Of Threonine Aldolase (Low-Specificity)
pdb|1JG8|D Chain D, Crystal Structure Of Threonine Aldolase (Low-Specificity)
pdb|1M6S|A Chain A, Crystal Structure Of Threonine Aldolase
pdb|1M6S|B Chain B, Crystal Structure Of Threonine Aldolase
pdb|1M6S|C Chain C, Crystal Structure Of Threonine Aldolase
pdb|1M6S|D Chain D, Crystal Structure Of Threonine Aldolase
Length = 347
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 52 AVLAVCSPGDEVIIPAP---FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 108
+++A GDEVI+ A FW MA ++ P +P + N +DP + +
Sbjct: 69 SIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGK---NGAMDPDDVRKAIRP 125
Query: 109 K-------SRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141
+ S + I + + G V P + EI I +H
Sbjct: 126 RNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEH 165
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 62 EVIIPAPFWVSYPEMARIA----DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 117
+V +P P W ++ + R A A P S +F + + SK+ EKS +L+
Sbjct: 125 DVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDI-SKIPEKSIILLHAC 183
Query: 118 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153
NPTG + E+A +V K LL D Y+
Sbjct: 184 AHNPTGVDPRQEQWKELASVVKKR-NLLAYFDMAYQ 218
>pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|B Chain B, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|C Chain C, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|D Chain D, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
Length = 283
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCR 299
+SE A Y ID +T YG+E EG GK N + R
Sbjct: 56 VSEALKAGYRHIDTATIYGNE-EGVGKAINGSGIAR 90
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 85/245 (34%), Gaps = 28/245 (11%)
Query: 105 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164
+ E++ + + P+NPTG+V L ++ R+ +H LV+ D Y P
Sbjct: 176 HIGEETGXICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVI-DNAYG----VPFPGII 230
Query: 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC---NKIQSQFTSGASSISQ 221
F+ +W + + + G R G I + A N I S G
Sbjct: 231 FSEARPLWNPNIILCXSLSKLGLPGSRCGIIIANDKTITAIANXNGIISLAPGGXGPAXX 290
Query: 222 KXXXXXXXXXXXXXEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 281
V+ ++ +++ + E + +P+GA +L++ F
Sbjct: 291 CEXIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFK--- 347
Query: 282 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDT-------CIRISYAASLTTL 332
+ + L L V VPG F G D C R +Y +
Sbjct: 348 --------DLPITTELLYQRLKARGVLXVPGHYFFPGLDKPWPHTHQCXRXNYVPEPDKI 399
Query: 333 QAAVE 337
+A V+
Sbjct: 400 EAGVK 404
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The
Archaeon Pyrococcus Horikoshii Reveals A Novel Editing
Domain Orientation
Length = 810
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 242 VKAFRER---RDFLVKSFGELEGVKMSEPQGAFYLFID 276
V FRE + V FG LEG KMS+ +G FID
Sbjct: 626 VAIFREEHWPKGIAVNGFGTLEGQKMSKSKGNVLNFID 663
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And
Trna(Leucine) Complex
pdb|1WZ2|B Chain B, The Crystal Structure Of Leucyl-Trna Synthetase And
Trna(Leucine) Complex
Length = 967
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 242 VKAFRER---RDFLVKSFGELEGVKMSEPQGAFYLFID 276
V FRE + V FG LEG KMS+ +G FID
Sbjct: 626 VAIFREEHWPKGIAVNGFGTLEGQKMSKSKGNVLNFID 663
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,653,980
Number of Sequences: 62578
Number of extensions: 369314
Number of successful extensions: 1152
Number of sequences better than 100.0: 127
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 893
Number of HSP's gapped (non-prelim): 138
length of query: 352
length of database: 14,973,337
effective HSP length: 100
effective length of query: 252
effective length of database: 8,715,537
effective search space: 2196315324
effective search space used: 2196315324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)