Query 018665
Match_columns 352
No_of_seqs 124 out of 1553
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 03:00:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018665.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018665hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 3.3E-54 7.1E-59 388.9 38.3 325 3-346 60-392 (393)
2 PRK06207 aspartate aminotransf 100.0 1.7E-49 3.7E-54 363.6 37.8 326 2-347 72-404 (405)
3 PRK07681 aspartate aminotransf 100.0 8.4E-49 1.8E-53 359.2 36.9 315 6-342 67-385 (399)
4 PRK06348 aspartate aminotransf 100.0 1.3E-48 2.9E-53 356.1 37.4 320 2-342 60-382 (384)
5 PRK07366 succinyldiaminopimela 100.0 9.8E-49 2.1E-53 357.8 35.7 321 3-343 63-388 (388)
6 PRK08068 transaminase; Reviewe 100.0 1.7E-48 3.7E-53 356.1 36.9 319 2-342 64-386 (389)
7 PLN00175 aminotransferase fami 100.0 2.2E-48 4.8E-53 356.6 37.1 321 2-344 85-412 (413)
8 TIGR03540 DapC_direct LL-diami 100.0 6.1E-48 1.3E-52 352.1 37.6 318 2-341 61-382 (383)
9 PRK07682 hypothetical protein; 100.0 3.4E-48 7.3E-53 353.2 35.5 323 2-346 51-377 (378)
10 PRK09276 LL-diaminopimelate am 100.0 8.6E-48 1.9E-52 351.3 37.1 317 3-341 64-384 (385)
11 PRK08636 aspartate aminotransf 100.0 1.9E-47 4.1E-52 350.4 37.4 326 2-346 65-401 (403)
12 PLN02187 rooty/superroot1 100.0 1.6E-47 3.4E-52 354.4 36.8 331 3-349 103-442 (462)
13 PRK05942 aspartate aminotransf 100.0 2E-47 4.4E-52 349.5 36.8 320 2-343 67-390 (394)
14 PRK06107 aspartate aminotransf 100.0 4.8E-47 1E-51 347.7 38.9 335 2-346 64-401 (402)
15 PLN00143 tyrosine/nicotianamin 100.0 3.6E-47 7.8E-52 348.6 37.3 331 2-349 68-408 (409)
16 PLN00145 tyrosine/nicotianamin 100.0 3E-47 6.5E-52 350.3 36.9 330 3-349 89-428 (430)
17 PRK09148 aminotransferase; Val 100.0 5.3E-47 1.1E-51 347.3 37.5 326 3-347 63-392 (405)
18 PRK06108 aspartate aminotransf 100.0 5.4E-47 1.2E-51 346.2 37.3 321 3-344 56-381 (382)
19 PRK08361 aspartate aminotransf 100.0 3.3E-47 7.1E-52 347.9 35.8 324 2-345 64-390 (391)
20 PRK09147 succinyldiaminopimela 100.0 3.6E-47 7.9E-52 348.2 35.8 317 2-344 59-395 (396)
21 PRK07324 transaminase; Validat 100.0 3.8E-47 8.3E-52 344.6 35.5 315 3-346 57-371 (373)
22 PRK06290 aspartate aminotransf 100.0 5.4E-47 1.2E-51 346.5 36.6 325 3-347 77-407 (410)
23 PTZ00433 tyrosine aminotransfe 100.0 6E-47 1.3E-51 347.9 36.8 329 2-347 69-410 (412)
24 PRK08912 hypothetical protein; 100.0 7E-47 1.5E-51 345.4 36.9 324 2-345 57-386 (387)
25 PRK08960 hypothetical protein; 100.0 1.2E-46 2.6E-51 343.8 36.4 318 3-344 64-386 (387)
26 PLN02656 tyrosine transaminase 100.0 1.5E-46 3.3E-51 344.7 37.3 330 2-348 67-406 (409)
27 PRK12414 putative aminotransfe 100.0 1.7E-46 3.6E-51 342.1 37.0 318 2-341 60-383 (384)
28 PLN02450 1-aminocyclopropane-1 100.0 7.5E-47 1.6E-51 350.4 34.2 330 3-347 81-432 (468)
29 PRK05764 aspartate aminotransf 100.0 2.7E-46 5.9E-51 342.6 37.3 328 3-346 63-392 (393)
30 PLN02607 1-aminocyclopropane-1 100.0 5.8E-47 1.3E-51 348.5 32.8 332 2-348 89-440 (447)
31 PRK05957 aspartate aminotransf 100.0 3.8E-46 8.3E-51 340.3 37.9 322 3-347 60-387 (389)
32 TIGR01264 tyr_amTase_E tyrosin 100.0 2E-46 4.4E-51 343.8 36.1 326 3-345 68-399 (401)
33 PRK06855 aminotransferase; Val 100.0 1.4E-46 3.1E-51 346.7 35.2 333 3-346 68-430 (433)
34 PLN02376 1-aminocyclopropane-1 100.0 1.3E-46 2.8E-51 349.8 34.7 332 2-347 88-440 (496)
35 TIGR03537 DapC succinyldiamino 100.0 2.8E-46 6E-51 336.8 35.3 313 2-341 30-349 (350)
36 COG1167 ARO8 Transcriptional r 100.0 2E-46 4.2E-51 345.7 34.8 321 2-347 126-457 (459)
37 PRK07683 aminotransferase A; V 100.0 9.1E-46 2E-50 337.6 37.9 320 3-345 60-383 (387)
38 PRK09082 methionine aminotrans 100.0 3E-46 6.4E-51 340.9 34.4 319 2-341 61-385 (386)
39 PTZ00377 alanine aminotransfer 100.0 3.4E-46 7.5E-51 348.6 35.6 337 3-348 110-478 (481)
40 PRK07777 aminotransferase; Val 100.0 7.8E-46 1.7E-50 338.5 36.8 322 2-343 55-384 (387)
41 PRK07309 aromatic amino acid a 100.0 1.1E-45 2.4E-50 337.5 37.6 323 2-347 61-390 (391)
42 PRK13355 bifunctional HTH-doma 100.0 5E-46 1.1E-50 350.2 36.2 328 3-347 180-516 (517)
43 KOG0257 Kynurenine aminotransf 100.0 5.7E-47 1.2E-51 324.9 26.7 332 2-341 63-415 (420)
44 PRK07550 hypothetical protein; 100.0 1E-45 2.3E-50 337.6 36.6 319 2-342 61-384 (386)
45 PRK07337 aminotransferase; Val 100.0 1E-45 2.2E-50 337.9 35.7 322 2-343 61-387 (388)
46 TIGR03538 DapC_gpp succinyldia 100.0 9E-46 2E-50 338.6 35.1 315 2-342 58-392 (393)
47 TIGR01265 tyr_nico_aTase tyros 100.0 1.5E-45 3.2E-50 337.9 36.5 327 2-345 67-401 (403)
48 PRK07568 aspartate aminotransf 100.0 3.2E-45 7E-50 336.0 38.1 323 3-348 61-395 (397)
49 PLN02231 alanine transaminase 100.0 9.9E-46 2.2E-50 345.6 34.6 336 3-347 163-529 (534)
50 PRK07590 L,L-diaminopimelate a 100.0 1.6E-45 3.5E-50 338.4 34.7 313 3-343 71-409 (409)
51 PRK08363 alanine aminotransfer 100.0 5.5E-45 1.2E-49 334.0 36.9 324 2-346 64-395 (398)
52 COG1168 MalY Bifunctional PLP- 100.0 4.9E-45 1.1E-49 310.0 33.4 322 5-346 57-387 (388)
53 PRK08175 aminotransferase; Val 100.0 4.5E-45 9.7E-50 334.1 35.8 324 2-347 61-391 (395)
54 PRK05839 hypothetical protein; 100.0 8.5E-45 1.8E-49 329.5 34.9 308 2-344 54-373 (374)
55 KOG0259 Tyrosine aminotransfer 100.0 1.5E-44 3.1E-49 304.8 33.5 329 2-347 97-435 (447)
56 PRK15481 transcriptional regul 100.0 1E-44 2.2E-49 335.3 34.6 311 2-344 115-430 (431)
57 PRK09265 aminotransferase AlaT 100.0 1.2E-43 2.6E-48 325.6 36.9 329 2-347 66-403 (404)
58 TIGR03542 DAPAT_plant LL-diami 100.0 3.1E-43 6.7E-48 322.5 34.2 312 3-343 70-402 (402)
59 PRK06836 aspartate aminotransf 100.0 9.8E-43 2.1E-47 318.4 37.3 313 2-347 67-393 (394)
60 PRK09275 aspartate aminotransf 100.0 2.6E-43 5.7E-48 324.9 32.2 329 3-348 129-520 (527)
61 PRK07865 N-succinyldiaminopime 100.0 8.5E-43 1.9E-47 315.9 34.7 300 3-340 57-363 (364)
62 PF00155 Aminotran_1_2: Aminot 100.0 2.2E-44 4.7E-49 327.0 23.3 315 2-339 38-363 (363)
63 TIGR03539 DapC_actino succinyl 100.0 4E-42 8.7E-47 310.4 34.3 299 3-339 51-356 (357)
64 PTZ00376 aspartate aminotransf 100.0 1E-42 2.2E-47 319.1 29.7 313 2-345 66-403 (404)
65 TIGR03801 asp_4_decarbox aspar 100.0 5.6E-42 1.2E-46 315.7 33.3 330 3-348 123-519 (521)
66 PRK01533 histidinol-phosphate 100.0 1.1E-42 2.5E-47 313.9 27.2 300 4-349 60-359 (366)
67 PRK09440 avtA valine--pyruvate 100.0 6.9E-42 1.5E-46 315.4 32.8 321 2-348 68-414 (416)
68 PRK06358 threonine-phosphate d 100.0 5.2E-42 1.1E-46 309.0 31.1 301 3-343 50-353 (354)
69 PRK03158 histidinol-phosphate 100.0 2.7E-42 5.9E-47 312.3 28.2 299 4-342 60-358 (359)
70 PRK02610 histidinol-phosphate 100.0 1.6E-41 3.4E-46 308.3 32.2 304 3-347 62-373 (374)
71 PRK06225 aspartate aminotransf 100.0 5.4E-41 1.2E-45 305.9 35.7 315 2-348 60-379 (380)
72 PRK14809 histidinol-phosphate 100.0 1.3E-41 2.8E-46 307.5 30.6 297 2-344 60-356 (357)
73 PRK09257 aromatic amino acid a 100.0 1.2E-41 2.5E-46 311.7 30.1 310 3-343 64-396 (396)
74 PRK08637 hypothetical protein; 100.0 1.1E-40 2.4E-45 304.2 33.3 321 2-347 38-388 (388)
75 PLN02368 alanine transaminase 100.0 2.5E-41 5.5E-46 307.2 28.7 269 2-278 101-396 (407)
76 PRK05166 histidinol-phosphate 100.0 3.4E-41 7.4E-46 306.0 29.1 302 2-343 66-369 (371)
77 PRK06425 histidinol-phosphate 100.0 6.4E-41 1.4E-45 299.5 30.0 295 2-343 35-331 (332)
78 PLN03026 histidinol-phosphate 100.0 7.8E-41 1.7E-45 303.9 30.4 297 3-342 82-379 (380)
79 PLN02672 methionine S-methyltr 100.0 9.9E-41 2.1E-45 325.3 33.1 328 8-345 730-1080(1082)
80 PRK04781 histidinol-phosphate 100.0 1E-40 2.2E-45 301.6 30.5 304 3-344 55-362 (364)
81 PRK03317 histidinol-phosphate 100.0 9.5E-41 2.1E-45 303.0 30.4 303 2-345 60-364 (368)
82 PRK01688 histidinol-phosphate 100.0 2E-41 4.2E-46 304.9 25.5 295 6-340 55-351 (351)
83 COG0079 HisC Histidinol-phosph 100.0 1.6E-40 3.4E-45 294.8 30.2 301 4-345 53-354 (356)
84 PRK07392 threonine-phosphate d 100.0 2.1E-40 4.6E-45 299.7 31.3 297 2-338 52-355 (360)
85 PRK08153 histidinol-phosphate 100.0 2.6E-40 5.5E-45 299.7 31.6 304 3-348 63-368 (369)
86 PRK02731 histidinol-phosphate 100.0 2.1E-40 4.5E-45 301.0 30.0 305 2-345 62-366 (367)
87 KOG0256 1-aminocyclopropane-1- 100.0 3.7E-40 7.9E-45 280.7 29.0 331 3-348 116-464 (471)
88 PLN02397 aspartate transaminas 100.0 3E-40 6.5E-45 303.5 30.0 310 3-344 86-420 (423)
89 PRK08056 threonine-phosphate d 100.0 7.6E-40 1.6E-44 295.5 31.4 301 3-344 51-354 (356)
90 PRK09105 putative aminotransfe 100.0 5.9E-40 1.3E-44 296.8 30.2 294 3-343 74-368 (370)
91 PRK05387 histidinol-phosphate 100.0 8.2E-40 1.8E-44 295.7 30.1 296 3-344 56-352 (353)
92 PRK14807 histidinol-phosphate 100.0 3.8E-39 8.1E-44 290.4 31.0 294 3-343 55-350 (351)
93 PRK04635 histidinol-phosphate 100.0 1.7E-39 3.7E-44 293.0 27.6 297 2-342 55-352 (354)
94 PRK06959 putative threonine-ph 100.0 1.2E-38 2.5E-43 285.1 30.9 285 3-347 50-335 (339)
95 PRK04870 histidinol-phosphate 100.0 6.5E-39 1.4E-43 289.8 28.5 293 3-342 59-355 (356)
96 TIGR01141 hisC histidinol-phos 100.0 6.1E-39 1.3E-43 289.2 27.8 295 3-339 50-345 (346)
97 PRK00950 histidinol-phosphate 100.0 3.7E-38 7.9E-43 285.8 29.5 292 4-343 66-360 (361)
98 PRK05664 threonine-phosphate d 100.0 1E-37 2.2E-42 278.5 31.4 278 10-345 51-328 (330)
99 TIGR01140 L_thr_O3P_dcar L-thr 100.0 3.5E-38 7.6E-43 281.6 28.4 285 3-339 43-329 (330)
100 PRK07908 hypothetical protein; 100.0 1.2E-37 2.7E-42 280.6 31.9 292 3-344 53-346 (349)
101 PRK03321 putative aminotransfe 100.0 3.1E-38 6.8E-43 285.0 27.3 299 2-344 52-350 (352)
102 KOG0634 Aromatic amino acid am 100.0 1.1E-36 2.3E-41 261.7 28.6 329 3-347 95-468 (472)
103 cd00609 AAT_like Aspartate ami 100.0 1.2E-35 2.5E-40 268.4 36.6 316 3-341 31-350 (350)
104 PRK14808 histidinol-phosphate 100.0 2E-36 4.2E-41 270.5 28.3 281 6-342 54-334 (335)
105 PRK03967 histidinol-phosphate 100.0 2.1E-36 4.6E-41 270.8 27.8 286 3-347 51-336 (337)
106 COG3977 Alanine-alpha-ketoisov 100.0 8.2E-36 1.8E-40 244.4 26.7 322 1-348 67-414 (417)
107 PRK08354 putative aminotransfe 100.0 5.6E-35 1.2E-39 258.8 30.9 267 10-341 42-308 (311)
108 PRK10874 cysteine sulfinate de 100.0 7E-33 1.5E-37 254.5 29.9 290 21-346 70-399 (401)
109 TIGR03392 FeS_syn_CsdA cystein 100.0 1.7E-32 3.6E-37 251.7 30.0 290 21-346 67-396 (398)
110 TIGR03576 pyridox_MJ0158 pyrid 100.0 2E-31 4.3E-36 237.8 30.2 278 21-343 61-345 (346)
111 cd06451 AGAT_like Alanine-glyo 100.0 8.4E-31 1.8E-35 237.2 29.6 290 21-344 39-356 (356)
112 PLN02822 serine palmitoyltrans 100.0 4.2E-31 9.1E-36 245.4 27.4 317 3-347 149-479 (481)
113 TIGR01979 sufS cysteine desulf 100.0 1.1E-30 2.4E-35 240.3 29.2 290 21-346 69-402 (403)
114 PRK13238 tnaA tryptophanase/L- 100.0 1.5E-30 3.2E-35 239.7 29.6 317 2-345 72-433 (460)
115 PLN02855 Bifunctional selenocy 100.0 8.6E-31 1.9E-35 242.1 28.2 292 21-347 83-420 (424)
116 PRK09295 bifunctional cysteine 100.0 1.7E-30 3.6E-35 238.9 29.7 288 21-344 74-403 (406)
117 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.7E-30 3.7E-35 235.6 28.6 293 21-346 58-369 (370)
118 COG0520 csdA Selenocysteine ly 100.0 6.1E-30 1.3E-34 230.8 30.3 294 10-344 68-404 (405)
119 KOG0258 Alanine aminotransfera 100.0 3.1E-30 6.7E-35 218.7 24.1 331 3-345 108-469 (475)
120 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.9E-29 4.1E-34 228.4 29.9 292 21-343 51-360 (361)
121 TIGR00858 bioF 8-amino-7-oxono 100.0 1.3E-29 2.7E-34 230.0 27.1 280 21-340 68-360 (360)
122 PRK02948 cysteine desulfurase; 100.0 7.6E-30 1.6E-34 232.9 24.7 294 19-350 48-379 (381)
123 cd06453 SufS_like Cysteine des 100.0 1.8E-29 4E-34 229.9 26.9 283 21-339 50-373 (373)
124 PLN02483 serine palmitoyltrans 100.0 2.6E-29 5.5E-34 234.0 28.2 304 4-348 142-469 (489)
125 TIGR01822 2am3keto_CoA 2-amino 100.0 7.2E-29 1.6E-33 227.5 30.8 291 11-347 86-391 (393)
126 PLN02721 threonine aldolase 100.0 6.1E-29 1.3E-33 224.9 29.9 298 7-345 39-352 (353)
127 COG1104 NifS Cysteine sulfinat 100.0 4.8E-29 1.1E-33 216.8 25.4 292 21-349 51-381 (386)
128 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.6E-28 3.5E-33 224.6 30.4 301 4-346 70-382 (385)
129 TIGR02326 transamin_PhnW 2-ami 100.0 1.3E-28 2.7E-33 223.4 29.4 291 21-344 42-361 (363)
130 PRK13392 5-aminolevulinate syn 100.0 6.8E-29 1.5E-33 228.5 28.0 293 9-346 92-398 (410)
131 PLN02409 serine--glyoxylate am 100.0 1.6E-28 3.4E-33 224.8 30.1 298 21-348 45-375 (401)
132 PRK06939 2-amino-3-ketobutyrat 100.0 1.7E-28 3.6E-33 225.6 29.3 297 7-346 82-394 (397)
133 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.7E-28 3.7E-33 225.4 29.2 285 21-339 67-397 (397)
134 TIGR03402 FeS_nifS cysteine de 100.0 8.5E-29 1.8E-33 225.8 27.0 290 21-348 49-375 (379)
135 cd00617 Tnase_like Tryptophana 100.0 1E-28 2.2E-33 224.4 27.1 314 2-346 47-409 (431)
136 PRK02627 acetylornithine amino 100.0 1.9E-28 4.1E-33 225.0 29.2 294 21-346 84-395 (396)
137 PRK07179 hypothetical protein; 100.0 3.3E-28 7.2E-33 223.7 29.6 287 21-348 106-401 (407)
138 PRK01278 argD acetylornithine 100.0 2.4E-28 5.2E-33 223.4 28.4 279 36-345 88-388 (389)
139 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 3.3E-28 7.1E-33 220.3 28.9 290 21-343 38-355 (355)
140 TIGR03403 nifS_epsilon cystein 100.0 2.2E-28 4.8E-33 223.3 27.3 295 21-348 46-378 (382)
141 cd06454 KBL_like KBL_like; thi 100.0 3.5E-28 7.6E-33 219.6 28.4 283 21-342 53-348 (349)
142 PRK10534 L-threonine aldolase; 100.0 1.2E-28 2.6E-33 220.9 25.1 291 2-344 28-332 (333)
143 PRK05958 8-amino-7-oxononanoat 100.0 4.7E-28 1E-32 221.7 28.3 283 21-343 91-385 (385)
144 TIGR01821 5aminolev_synth 5-am 100.0 8E-28 1.7E-32 220.9 29.6 295 9-347 91-398 (402)
145 PRK13479 2-aminoethylphosphona 100.0 1.1E-27 2.3E-32 217.8 30.0 293 21-347 44-365 (368)
146 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.4E-27 3E-32 217.8 30.3 302 10-348 65-384 (387)
147 PRK09064 5-aminolevulinate syn 100.0 1.3E-27 2.9E-32 219.9 29.2 298 5-347 88-399 (407)
148 TIGR01977 am_tr_V_EF2568 cyste 100.0 8.2E-28 1.8E-32 219.3 27.5 287 21-341 51-375 (376)
149 cd06502 TA_like Low-specificit 100.0 7E-28 1.5E-32 216.7 26.5 295 3-341 27-337 (338)
150 PRK03244 argD acetylornithine 100.0 5.7E-28 1.2E-32 221.6 26.4 275 36-347 103-396 (398)
151 KOG0633 Histidinol phosphate a 100.0 6.3E-28 1.4E-32 194.5 21.1 287 33-342 83-374 (375)
152 PRK07049 methionine gamma-lyas 100.0 6.3E-27 1.4E-31 214.3 29.6 223 6-264 81-316 (427)
153 TIGR02006 IscS cysteine desulf 100.0 2.8E-27 6.1E-32 217.0 26.7 288 21-347 54-379 (402)
154 TIGR00707 argD acetylornithine 100.0 3E-27 6.5E-32 215.8 26.6 277 36-343 84-379 (379)
155 cd06450 DOPA_deC_like DOPA dec 100.0 7.4E-28 1.6E-32 217.1 21.8 293 3-342 29-345 (345)
156 PRK13393 5-aminolevulinate syn 100.0 1.1E-26 2.4E-31 213.4 29.7 288 21-346 97-397 (406)
157 cd00378 SHMT Serine-glycine hy 100.0 1.4E-26 3E-31 213.0 29.0 307 4-347 57-387 (402)
158 PF12897 Aminotran_MocR: Alani 100.0 1.1E-26 2.3E-31 198.7 25.6 316 2-345 62-415 (425)
159 PRK13520 L-tyrosine decarboxyl 100.0 2.7E-26 5.9E-31 209.0 29.1 289 21-344 66-370 (371)
160 PLN02242 methionine gamma-lyas 100.0 2.6E-26 5.5E-31 209.6 28.3 290 6-347 74-417 (418)
161 PLN03227 serine palmitoyltrans 100.0 2.3E-26 4.9E-31 209.3 27.6 311 3-346 38-383 (392)
162 PRK04073 rocD ornithine--oxo-a 100.0 2.5E-26 5.4E-31 210.3 27.8 271 36-343 97-395 (396)
163 PRK14012 cysteine desulfurase; 100.0 1.6E-26 3.5E-31 212.3 26.6 289 18-347 53-381 (404)
164 PRK08247 cystathionine gamma-s 100.0 5.1E-26 1.1E-30 205.4 28.7 285 6-345 50-364 (366)
165 PRK02936 argD acetylornithine 100.0 6.8E-26 1.5E-30 206.5 28.7 288 21-343 74-377 (377)
166 TIGR03812 tyr_de_CO2_Arch tyro 100.0 8.9E-26 1.9E-30 205.7 29.2 287 21-341 66-372 (373)
167 cd00610 OAT_like Acetyl ornith 100.0 6.6E-26 1.4E-30 209.4 27.5 289 35-343 95-413 (413)
168 COG1448 TyrB Aspartate/tyrosin 100.0 1.9E-26 4.2E-31 196.8 21.8 309 3-342 64-395 (396)
169 PLN02651 cysteine desulfurase 100.0 3E-26 6.4E-31 207.7 24.4 274 21-333 50-364 (364)
170 PRK06234 methionine gamma-lyas 100.0 1.4E-25 3.1E-30 204.5 28.9 218 6-262 62-287 (400)
171 PRK05093 argD bifunctional N-s 100.0 9.6E-26 2.1E-30 206.9 28.0 277 36-346 97-401 (403)
172 PF00266 Aminotran_5: Aminotra 100.0 6.2E-26 1.3E-30 206.4 26.1 281 19-335 48-371 (371)
173 PRK06767 methionine gamma-lyas 100.0 1.9E-25 4.2E-30 203.0 28.5 286 6-344 59-384 (386)
174 PRK08133 O-succinylhomoserine 99.9 3.7E-25 8.1E-30 201.0 30.0 210 21-264 68-282 (390)
175 cd00613 GDC-P Glycine cleavage 99.9 1.1E-25 2.3E-30 207.0 26.6 295 7-339 59-398 (398)
176 PRK00451 glycine dehydrogenase 99.9 1.6E-25 3.5E-30 208.3 28.0 286 17-343 115-446 (447)
177 PRK06460 hypothetical protein; 99.9 6E-25 1.3E-29 198.7 30.2 217 7-263 44-265 (376)
178 cd00614 CGS_like CGS_like: Cys 99.9 7.5E-25 1.6E-29 198.3 29.7 218 6-263 38-261 (369)
179 PRK08249 cystathionine gamma-s 99.9 8.7E-25 1.9E-29 198.7 29.4 217 7-263 63-284 (398)
180 TIGR01437 selA_rel uncharacter 99.9 2.6E-25 5.7E-30 200.4 25.7 272 36-343 60-363 (363)
181 PRK08045 cystathionine gamma-s 99.9 1.2E-24 2.6E-29 197.0 29.7 218 6-263 50-273 (386)
182 COG0156 BioF 7-keto-8-aminopel 99.9 1.1E-24 2.4E-29 193.0 27.6 294 4-342 80-387 (388)
183 PRK12381 bifunctional succinyl 99.9 7.8E-25 1.7E-29 200.7 27.6 288 36-350 96-404 (406)
184 PRK04260 acetylornithine amino 99.9 1.7E-24 3.7E-29 197.0 28.9 291 21-343 73-375 (375)
185 PRK08861 cystathionine gamma-s 99.9 3E-24 6.4E-29 193.8 29.8 218 6-263 51-274 (388)
186 TIGR02080 O_succ_thio_ly O-suc 99.9 1.8E-24 3.8E-29 195.8 28.2 218 6-263 49-272 (382)
187 TIGR01325 O_suc_HS_sulf O-succ 99.9 2.1E-24 4.5E-29 195.8 28.6 217 8-264 54-275 (380)
188 COG4992 ArgD Ornithine/acetylo 99.9 6.4E-25 1.4E-29 190.8 23.8 291 21-349 87-402 (404)
189 PRK07504 O-succinylhomoserine 99.9 1.8E-24 3.9E-29 196.9 27.7 218 6-263 63-286 (398)
190 PRK00854 rocD ornithine--oxo-a 99.9 1.3E-24 2.8E-29 199.6 26.9 281 21-344 90-400 (401)
191 PRK08088 4-aminobutyrate amino 99.9 1.6E-24 3.5E-29 199.6 27.4 309 21-346 87-424 (425)
192 TIGR03235 DNA_S_dndA cysteine 99.9 3E-25 6.4E-30 200.6 21.7 276 21-335 49-348 (353)
193 PRK09028 cystathionine beta-ly 99.9 8.8E-24 1.9E-28 190.5 30.9 216 8-263 61-281 (394)
194 PRK08776 cystathionine gamma-s 99.9 9.6E-24 2.1E-28 192.1 31.4 209 21-263 67-281 (405)
195 PRK07503 methionine gamma-lyas 99.9 5.2E-24 1.1E-28 194.2 29.7 217 7-263 64-287 (403)
196 TIGR01328 met_gam_lyase methio 99.9 6.8E-24 1.5E-28 192.7 30.0 218 7-264 58-282 (391)
197 TIGR00713 hemL glutamate-1-sem 99.9 9.9E-25 2.1E-29 201.6 24.7 312 6-346 86-423 (423)
198 PLN00144 acetylornithine trans 99.9 2.7E-24 5.9E-29 195.0 26.6 284 36-346 72-381 (382)
199 TIGR03246 arg_catab_astC succi 99.9 7E-24 1.5E-28 193.9 28.6 277 36-346 92-396 (397)
200 COG0075 Serine-pyruvate aminot 99.9 2.5E-23 5.3E-28 182.8 30.4 284 36-348 56-366 (383)
201 PRK07810 O-succinylhomoserine 99.9 8.9E-24 1.9E-28 192.4 28.6 219 7-265 69-293 (403)
202 PTZ00125 ornithine aminotransf 99.9 5.4E-24 1.2E-28 195.6 27.1 285 36-347 88-397 (400)
203 PRK07811 cystathionine gamma-s 99.9 2.2E-23 4.8E-28 189.3 30.6 218 6-263 59-282 (388)
204 PRK08574 cystathionine gamma-s 99.9 2.5E-23 5.4E-28 188.5 30.2 215 8-263 53-273 (385)
205 PLN02955 8-amino-7-oxononanoat 99.9 1E-23 2.2E-28 191.1 27.5 283 21-348 154-464 (476)
206 PRK07582 cystathionine gamma-l 99.9 2.4E-23 5.2E-28 187.8 29.5 215 6-264 49-269 (366)
207 PRK05968 hypothetical protein; 99.9 1.5E-23 3.3E-28 190.5 28.3 277 21-346 70-387 (389)
208 PRK00011 glyA serine hydroxyme 99.9 1.6E-23 3.4E-28 193.4 28.2 289 22-345 79-389 (416)
209 TIGR01329 cysta_beta_ly_E cyst 99.9 2.6E-23 5.7E-28 188.2 29.0 278 20-346 53-376 (378)
210 PRK07050 cystathionine beta-ly 99.9 1.5E-23 3.3E-28 190.5 27.5 217 7-263 64-286 (394)
211 PRK09792 4-aminobutyrate trans 99.9 4.3E-23 9.2E-28 189.5 29.2 291 37-344 102-420 (421)
212 TIGR01814 kynureninase kynuren 99.9 1.6E-23 3.4E-28 192.5 26.2 274 34-343 84-405 (406)
213 TIGR00700 GABAtrnsam 4-aminobu 99.9 2.5E-23 5.5E-28 191.3 27.5 292 37-344 95-419 (420)
214 TIGR01324 cysta_beta_ly_B cyst 99.9 5.6E-23 1.2E-27 185.3 28.4 278 21-344 57-375 (377)
215 cd00616 AHBA_syn 3-amino-5-hyd 99.9 8.9E-23 1.9E-27 184.6 29.3 290 4-340 14-352 (352)
216 TIGR02379 ECA_wecE TDP-4-keto- 99.9 7.2E-23 1.6E-27 185.1 28.2 280 21-343 38-375 (376)
217 PRK08248 O-acetylhomoserine am 99.9 5.5E-23 1.2E-27 188.3 27.7 211 19-263 69-317 (431)
218 PRK07505 hypothetical protein; 99.9 4.2E-23 9E-28 189.5 26.9 284 21-345 98-399 (402)
219 PRK08064 cystathionine beta-ly 99.9 2.5E-22 5.5E-27 182.5 31.0 207 21-262 61-273 (390)
220 PRK05937 8-amino-7-oxononanoat 99.9 1.5E-22 3.2E-27 183.8 28.4 285 19-350 61-355 (370)
221 PRK06084 O-acetylhomoserine am 99.9 2E-22 4.2E-27 184.5 27.3 209 21-263 65-312 (425)
222 PRK06918 4-aminobutyrate amino 99.9 2.9E-22 6.3E-27 185.7 28.8 292 37-347 116-445 (451)
223 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 5.1E-22 1.1E-26 180.4 29.3 283 21-343 38-374 (375)
224 PRK07269 cystathionine gamma-s 99.9 3.5E-22 7.6E-27 179.5 27.7 285 7-344 53-363 (364)
225 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.5E-22 7.5E-27 181.5 27.7 294 7-344 32-378 (379)
226 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 4.8E-22 1E-26 182.4 28.8 159 8-199 57-219 (418)
227 PRK05967 cystathionine beta-ly 99.9 5.5E-22 1.2E-26 178.5 28.4 199 37-262 80-283 (395)
228 PRK06702 O-acetylhomoserine am 99.9 8.1E-22 1.8E-26 179.2 29.4 213 19-264 66-315 (432)
229 PRK06777 4-aminobutyrate amino 99.9 6.5E-22 1.4E-26 181.7 29.1 289 36-344 101-420 (421)
230 PRK04612 argD acetylornithine 99.9 3.9E-22 8.4E-27 182.0 27.4 284 37-347 99-405 (408)
231 PRK05939 hypothetical protein; 99.9 5.4E-22 1.2E-26 180.2 28.1 211 19-263 52-288 (397)
232 PLN02509 cystathionine beta-ly 99.9 5.6E-22 1.2E-26 181.9 27.5 210 19-263 138-353 (464)
233 PRK07495 4-aminobutyrate amino 99.9 1.3E-21 2.8E-26 179.5 29.8 290 37-347 102-423 (425)
234 PRK07671 cystathionine beta-ly 99.9 7.2E-22 1.6E-26 178.6 27.8 216 8-264 50-271 (377)
235 PRK04366 glycine dehydrogenase 99.9 6.2E-22 1.3E-26 184.6 27.9 309 7-348 108-451 (481)
236 TIGR01885 Orn_aminotrans ornit 99.9 7.1E-22 1.5E-26 181.3 27.2 276 36-343 94-400 (401)
237 PLN02624 ornithine-delta-amino 99.9 6E-22 1.3E-26 184.2 26.9 280 36-346 132-445 (474)
238 COG0160 GabT 4-aminobutyrate a 99.9 1.4E-21 3.1E-26 175.1 27.9 292 35-346 116-446 (447)
239 PRK06176 cystathionine gamma-s 99.9 1.9E-21 4.2E-26 175.9 28.0 207 21-262 57-269 (380)
240 TIGR02407 ectoine_ectB diamino 99.9 2.5E-21 5.4E-26 177.3 28.7 286 38-345 100-412 (412)
241 PRK00062 glutamate-1-semialdeh 99.9 4.7E-22 1E-26 183.2 23.7 292 35-346 105-425 (426)
242 PRK08360 4-aminobutyrate amino 99.9 7.2E-21 1.6E-25 175.3 31.0 291 37-348 102-429 (443)
243 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 4E-21 8.7E-26 172.4 28.5 209 21-263 62-278 (386)
244 PRK08134 O-acetylhomoserine am 99.9 2.9E-21 6.2E-26 176.9 28.0 211 19-263 69-317 (433)
245 TIGR03588 PseC UDP-4-keto-6-de 99.9 7E-21 1.5E-25 173.6 30.2 294 4-343 25-380 (380)
246 PRK06058 4-aminobutyrate amino 99.9 8.4E-21 1.8E-25 175.5 29.7 304 21-345 102-442 (443)
247 PRK08114 cystathionine beta-ly 99.9 1.4E-20 2.9E-25 169.3 29.6 210 21-263 69-284 (395)
248 PLN02724 Molybdenum cofactor s 99.9 1.5E-21 3.2E-26 192.3 25.5 300 21-345 85-488 (805)
249 KOG1549 Cysteine desulfurase N 99.9 9.2E-22 2E-26 172.1 20.5 297 10-348 87-421 (428)
250 cd00615 Orn_deC_like Ornithine 99.9 2.6E-22 5.7E-27 176.2 17.4 226 6-257 57-293 (294)
251 PRK08117 4-aminobutyrate amino 99.9 4.7E-21 1E-25 177.2 26.0 292 36-347 103-431 (433)
252 PRK05964 adenosylmethionine--8 99.9 6.6E-21 1.4E-25 175.6 26.5 284 36-346 102-423 (423)
253 PRK05994 O-acetylhomoserine am 99.9 1.7E-20 3.6E-25 172.3 28.8 209 21-263 70-316 (427)
254 PRK07812 O-acetylhomoserine am 99.9 1.4E-20 3.1E-25 172.2 27.8 210 21-263 76-321 (436)
255 PRK03080 phosphoserine aminotr 99.9 2.8E-21 6E-26 175.5 23.0 282 21-347 55-375 (378)
256 PRK09264 diaminobutyrate--2-ox 99.9 2.1E-20 4.5E-25 172.1 28.5 286 38-348 104-419 (425)
257 PRK13580 serine hydroxymethylt 99.9 1.9E-20 4.2E-25 170.1 26.7 288 34-346 110-446 (493)
258 PTZ00094 serine hydroxymethylt 99.9 1.6E-20 3.5E-25 174.3 26.7 291 21-345 87-408 (452)
259 PRK13034 serine hydroxymethylt 99.9 2.2E-20 4.7E-25 171.3 27.1 290 22-346 82-393 (416)
260 COG0399 WecE Predicted pyridox 99.9 4E-20 8.6E-25 162.9 26.8 286 17-345 37-373 (374)
261 TIGR03372 putres_am_tran putre 99.9 2.3E-20 5.1E-25 171.0 26.2 277 37-343 135-442 (442)
262 PRK03715 argD acetylornithine 99.9 5.2E-20 1.1E-24 167.6 28.2 293 21-346 81-394 (395)
263 PRK02769 histidine decarboxyla 99.9 6.7E-20 1.5E-24 165.1 28.5 282 21-345 72-372 (380)
264 PLN02414 glycine dehydrogenase 99.9 4.2E-20 9.1E-25 181.1 28.2 300 18-347 572-909 (993)
265 COG2008 GLY1 Threonine aldolas 99.9 1.6E-20 3.4E-25 160.4 21.7 300 3-343 30-341 (342)
266 COG0626 MetC Cystathionine bet 99.9 1.8E-19 3.9E-24 159.7 29.0 210 21-264 70-287 (396)
267 TIGR01364 serC_1 phosphoserine 99.9 2.8E-20 6.1E-25 166.4 24.0 280 21-345 44-348 (349)
268 PRK08593 4-aminobutyrate amino 99.9 2.5E-19 5.4E-24 165.4 30.7 291 37-348 104-432 (445)
269 PRK11522 putrescine--2-oxoglut 99.9 1.1E-19 2.4E-24 167.8 27.5 286 36-348 141-454 (459)
270 PRK05613 O-acetylhomoserine am 99.9 2.5E-19 5.3E-24 164.1 29.2 212 19-263 74-326 (437)
271 TIGR01788 Glu-decarb-GAD gluta 99.9 7.9E-20 1.7E-24 166.8 25.2 304 21-346 87-430 (431)
272 PRK07678 aminotransferase; Val 99.9 1.6E-19 3.4E-24 167.0 26.9 298 37-346 106-450 (451)
273 COG0001 HemL Glutamate-1-semia 99.9 1.6E-19 3.5E-24 158.9 25.2 300 21-347 100-430 (432)
274 cd00611 PSAT_like Phosphoserin 99.9 2.3E-20 4.9E-25 168.2 20.1 278 21-342 51-353 (355)
275 KOG1368 Threonine aldolase [Am 99.9 1.3E-19 2.8E-24 149.4 22.4 302 3-346 51-370 (384)
276 TIGR02618 tyr_phenol_ly tyrosi 99.9 6.9E-19 1.5E-23 157.8 28.9 309 4-346 67-427 (450)
277 PRK05355 3-phosphoserine/phosp 99.9 6.6E-20 1.4E-24 164.9 22.6 280 21-345 55-358 (360)
278 KOG1360 5-aminolevulinate synt 99.9 6.1E-20 1.3E-24 156.9 20.5 292 21-348 223-527 (570)
279 PF01041 DegT_DnrJ_EryC1: DegT 99.9 4.1E-19 8.9E-24 160.7 26.7 281 18-340 29-363 (363)
280 PRK07482 hypothetical protein; 99.9 4.2E-19 9.1E-24 164.5 27.1 311 21-346 97-455 (461)
281 TIGR00709 dat 2,4-diaminobutyr 99.9 1.2E-18 2.5E-23 161.1 30.0 291 39-346 105-436 (442)
282 PRK06434 cystathionine gamma-l 99.9 6.5E-19 1.4E-23 158.6 27.2 209 18-263 68-282 (384)
283 PRK06541 hypothetical protein; 99.9 9E-19 2E-23 162.1 28.9 297 36-348 112-458 (460)
284 PRK05965 hypothetical protein; 99.9 5.4E-19 1.2E-23 163.7 27.3 295 36-349 107-451 (459)
285 PRK06173 adenosylmethionine--8 99.9 3.3E-19 7.1E-24 163.6 24.6 282 36-346 104-426 (429)
286 TIGR03531 selenium_SpcS O-phos 99.9 7.2E-19 1.6E-23 159.8 26.5 295 17-342 108-443 (444)
287 KOG1412 Aspartate aminotransfe 99.9 2.9E-19 6.2E-24 148.1 21.4 314 3-348 69-408 (410)
288 PLN03032 serine decarboxylase; 99.9 6.9E-19 1.5E-23 157.4 25.6 277 21-341 73-372 (374)
289 PLN02760 4-aminobutyrate:pyruv 99.8 2.4E-18 5.3E-23 160.3 29.2 292 37-347 152-493 (504)
290 PRK06943 adenosylmethionine--8 99.8 3.4E-18 7.3E-23 158.0 29.6 288 37-346 115-447 (453)
291 PRK04013 argD acetylornithine/ 99.8 6.8E-19 1.5E-23 157.7 23.5 264 36-347 81-362 (364)
292 PRK15407 lipopolysaccharide bi 99.8 6.1E-18 1.3E-22 155.6 30.4 283 20-344 69-435 (438)
293 PRK05639 4-aminobutyrate amino 99.8 2.7E-18 5.8E-23 158.7 28.1 290 37-347 114-445 (457)
294 PRK13237 tyrosine phenol-lyase 99.8 6.9E-18 1.5E-22 151.8 29.7 311 3-346 73-434 (460)
295 KOG2862 Alanine-glyoxylate ami 99.8 6.6E-18 1.4E-22 140.2 27.1 284 35-346 67-383 (385)
296 PRK05769 4-aminobutyrate amino 99.8 7E-18 1.5E-22 155.6 30.5 286 37-346 116-440 (441)
297 KOG0053 Cystathionine beta-lya 99.8 4.4E-18 9.6E-23 148.9 27.4 209 21-263 84-298 (409)
298 PF04864 Alliinase_C: Allinase 99.8 1.4E-19 3E-24 153.4 17.2 284 21-342 50-362 (363)
299 PRK12403 putative aminotransfe 99.8 2.5E-18 5.4E-23 159.3 27.3 297 36-348 115-455 (460)
300 COG2873 MET17 O-acetylhomoseri 99.8 1.1E-18 2.4E-23 148.5 22.3 211 21-265 69-317 (426)
301 PRK05630 adenosylmethionine--8 99.8 2.3E-18 4.9E-23 157.8 26.2 280 36-345 100-420 (422)
302 PRK13360 omega amino acid--pyr 99.8 8.4E-18 1.8E-22 155.0 30.1 286 36-346 106-441 (442)
303 PRK07986 adenosylmethionine--8 99.8 1.7E-18 3.6E-23 158.7 25.3 280 36-345 103-423 (428)
304 PRK06062 hypothetical protein; 99.8 3.8E-18 8.3E-23 157.7 27.5 297 36-347 112-447 (451)
305 PRK07481 hypothetical protein; 99.8 1.1E-17 2.4E-22 154.7 30.3 292 36-347 104-447 (449)
306 PRK09221 beta alanine--pyruvat 99.8 4.1E-18 9E-23 157.2 27.4 286 36-346 109-444 (445)
307 PRK06082 4-aminobutyrate amino 99.8 5E-18 1.1E-22 157.1 27.3 291 36-347 130-453 (459)
308 PRK06105 aminotransferase; Pro 99.8 5.7E-18 1.2E-22 156.9 27.6 293 36-348 109-452 (460)
309 PLN03226 serine hydroxymethylt 99.8 3.6E-18 7.8E-23 158.1 26.1 274 43-345 107-419 (475)
310 PRK07483 hypothetical protein; 99.8 1.2E-17 2.6E-22 154.1 29.5 303 36-348 90-440 (443)
311 PRK12389 glutamate-1-semialdeh 99.8 7.6E-18 1.6E-22 155.2 27.4 291 36-345 109-427 (428)
312 PRK06917 hypothetical protein; 99.8 1.3E-17 2.8E-22 154.0 28.7 298 37-348 92-440 (447)
313 PRK08742 adenosylmethionine--8 99.8 1.1E-17 2.4E-22 154.9 28.2 293 37-346 130-468 (472)
314 PLN02271 serine hydroxymethylt 99.8 1.4E-17 3E-22 152.2 28.2 279 37-344 216-539 (586)
315 PRK07036 hypothetical protein; 99.8 1.6E-17 3.5E-22 154.0 28.9 305 21-346 98-453 (466)
316 PRK07480 putative aminotransfe 99.8 7.6E-18 1.6E-22 155.8 26.6 296 36-348 111-451 (456)
317 PLN02482 glutamate-1-semialdeh 99.8 9.8E-18 2.1E-22 155.0 26.5 290 36-345 155-473 (474)
318 PRK00615 glutamate-1-semialdeh 99.8 5.2E-18 1.1E-22 155.5 24.5 296 37-347 111-430 (433)
319 TIGR01366 serC_3 phosphoserine 99.8 1.9E-18 4E-23 155.8 21.1 281 21-346 48-361 (361)
320 PRK07046 aminotransferase; Val 99.8 1.6E-17 3.5E-22 153.3 27.7 287 36-346 130-451 (453)
321 PRK07030 adenosylmethionine--8 99.8 3.1E-17 6.6E-22 152.0 29.1 291 36-346 107-447 (466)
322 COG0161 BioA Adenosylmethionin 99.8 8.8E-18 1.9E-22 149.9 24.2 292 36-347 105-445 (449)
323 PRK06938 diaminobutyrate--2-ox 99.8 3.4E-17 7.3E-22 151.6 29.1 292 38-346 128-461 (464)
324 COG1103 Archaea-specific pyrid 99.8 4.5E-17 9.8E-22 132.8 24.9 299 18-347 65-382 (382)
325 PRK06916 adenosylmethionine--8 99.8 4E-17 8.7E-22 151.3 28.0 291 37-347 117-457 (460)
326 PRK06148 hypothetical protein; 99.8 1.9E-17 4.1E-22 166.2 27.7 292 37-346 681-1011(1013)
327 KOG1359 Glycine C-acetyltransf 99.8 8.8E-18 1.9E-22 138.4 20.5 284 21-346 119-413 (417)
328 TIGR00508 bioA adenosylmethion 99.8 2.7E-17 5.9E-22 151.2 26.2 279 37-345 106-426 (427)
329 cd01494 AAT_I Aspartate aminot 99.8 2.6E-18 5.5E-23 138.6 16.3 165 18-198 4-170 (170)
330 KOG1404 Alanine-glyoxylate ami 99.8 3.3E-17 7.1E-22 140.3 23.5 296 21-339 99-432 (442)
331 PRK06149 hypothetical protein; 99.8 5.3E-17 1.1E-21 163.0 28.9 292 36-345 641-970 (972)
332 PLN02880 tyrosine decarboxylas 99.8 6.1E-17 1.3E-21 150.7 26.9 324 5-348 115-487 (490)
333 PRK15029 arginine decarboxylas 99.8 6.1E-17 1.3E-21 155.0 27.2 232 6-260 203-465 (755)
334 PRK06931 diaminobutyrate--2-ox 99.8 1.6E-16 3.4E-21 147.1 29.3 296 38-346 123-455 (459)
335 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 2.4E-18 5.3E-23 153.8 15.3 240 6-267 64-328 (417)
336 PF00464 SHMT: Serine hydroxym 99.8 7E-17 1.5E-21 143.9 24.1 267 43-338 93-398 (399)
337 PRK04311 selenocysteine syntha 99.8 1.5E-16 3.3E-21 146.2 26.8 291 19-344 132-463 (464)
338 PLN02590 probable tyrosine dec 99.8 2.3E-16 4.9E-21 147.0 27.8 324 4-348 162-535 (539)
339 COG0112 GlyA Glycine/serine hy 99.8 2.9E-16 6.4E-21 135.3 25.6 282 34-345 87-390 (413)
340 PRK13578 ornithine decarboxyla 99.8 9.6E-17 2.1E-21 152.2 24.8 311 8-347 174-567 (720)
341 KOG1402 Ornithine aminotransfe 99.8 8.8E-17 1.9E-21 134.5 21.6 288 19-344 106-426 (427)
342 PRK08297 L-lysine aminotransfe 99.8 3.2E-16 6.9E-21 144.6 27.7 282 36-346 110-442 (443)
343 KOG1401 Acetylornithine aminot 99.8 2.1E-16 4.6E-21 136.3 22.9 291 35-347 115-432 (433)
344 KOG1411 Aspartate aminotransfe 99.8 1.3E-17 2.9E-22 140.2 14.5 310 4-344 91-424 (427)
345 TIGR01365 serC_2 phosphoserine 99.8 2.8E-16 6.1E-21 140.7 23.9 276 38-345 60-373 (374)
346 PLN02263 serine decarboxylase 99.8 1.7E-15 3.6E-20 137.7 28.2 289 21-346 136-444 (470)
347 PRK12566 glycine dehydrogenase 99.7 9.7E-16 2.1E-20 148.1 26.8 303 13-346 542-877 (954)
348 KOG1357 Serine palmitoyltransf 99.7 2.7E-17 5.8E-22 143.1 14.5 288 21-345 189-502 (519)
349 PRK05367 glycine dehydrogenase 99.7 6.5E-16 1.4E-20 152.6 25.8 303 16-348 544-878 (954)
350 TIGR00699 GABAtrns_euk 4-amino 99.7 2.9E-16 6.3E-21 144.4 20.6 277 37-343 123-464 (464)
351 TIGR00474 selA seryl-tRNA(sec) 99.7 2.1E-15 4.6E-20 138.3 26.2 284 21-339 129-453 (454)
352 PRK06209 glutamate-1-semialdeh 99.7 3.8E-16 8.2E-21 144.0 20.8 279 36-346 104-406 (431)
353 PLN02974 adenosylmethionine-8- 99.7 4.3E-15 9.3E-20 144.5 28.4 218 109-343 584-816 (817)
354 PRK05367 glycine dehydrogenase 99.7 1.5E-15 3.3E-20 150.0 24.9 283 9-340 116-437 (954)
355 TIGR03251 LAT_fam L-lysine 6-t 99.7 2.1E-15 4.6E-20 139.0 24.4 280 36-342 103-431 (431)
356 PRK15400 lysine decarboxylase 99.7 4.8E-15 1E-19 140.6 25.8 308 8-345 195-559 (714)
357 TIGR03799 NOD_PanD_pyr putativ 99.7 7.6E-15 1.7E-19 137.0 26.1 315 5-338 122-518 (522)
358 TIGR00461 gcvP glycine dehydro 99.7 1.8E-14 3.8E-19 140.3 28.5 304 13-347 529-869 (939)
359 PLN02414 glycine dehydrogenase 99.7 4E-15 8.7E-20 146.5 24.0 282 11-341 145-465 (993)
360 TIGR02617 tnaA_trp_ase tryptop 99.7 1.3E-14 2.8E-19 129.3 23.8 313 3-345 69-441 (467)
361 COG0076 GadB Glutamate decarbo 99.7 5E-15 1.1E-19 135.8 21.6 255 7-279 96-381 (460)
362 PRK15399 lysine decarboxylase 99.7 4.3E-14 9.2E-19 134.2 27.4 308 8-345 195-559 (713)
363 KOG1358 Serine palmitoyltransf 99.7 4.4E-15 9.5E-20 127.2 17.6 308 3-346 134-466 (467)
364 PLN02452 phosphoserine transam 99.7 3.8E-14 8.3E-19 127.0 23.1 269 37-345 72-363 (365)
365 COG3844 Kynureninase [Amino ac 99.7 5.6E-14 1.2E-18 117.9 21.7 272 34-346 91-403 (407)
366 PF01212 Beta_elim_lyase: Beta 99.6 1.5E-16 3.2E-21 137.8 6.1 237 3-265 24-275 (290)
367 COG1982 LdcC Arginine/lysine/o 99.6 4.7E-13 1E-17 122.3 26.2 240 8-268 70-321 (557)
368 PRK12462 phosphoserine aminotr 99.6 6.8E-13 1.5E-17 117.7 23.7 268 38-345 70-362 (364)
369 PF00202 Aminotran_3: Aminotra 99.6 8.2E-14 1.8E-18 124.5 17.1 242 21-277 62-337 (339)
370 TIGR00461 gcvP glycine dehydro 99.6 2.4E-12 5.2E-17 125.7 25.3 280 9-340 104-426 (939)
371 PF02347 GDC-P: Glycine cleava 99.5 2.1E-12 4.6E-17 115.8 20.3 283 9-339 105-429 (429)
372 KOG1383 Glutamate decarboxylas 99.5 2.5E-12 5.5E-17 113.1 20.2 277 40-348 142-449 (491)
373 PF00282 Pyridoxal_deC: Pyrido 99.5 3.8E-12 8.3E-17 114.8 21.1 253 7-276 74-371 (373)
374 KOG1403 Predicted alanine-glyo 99.5 9.1E-13 2E-17 109.4 14.5 295 36-345 102-437 (452)
375 COG3033 TnaA Tryptophanase [Am 99.5 1.1E-11 2.5E-16 105.5 20.3 317 4-346 75-445 (471)
376 PF06838 Met_gamma_lyase: Meth 99.4 6.8E-11 1.5E-15 101.8 21.6 170 21-208 61-248 (403)
377 KOG2467 Glycine/serine hydroxy 99.4 1.7E-10 3.7E-15 98.6 21.3 287 29-344 98-425 (477)
378 COG0403 GcvP Glycine cleavage 99.4 4E-10 8.6E-15 98.7 23.8 292 7-343 113-448 (450)
379 TIGR03811 tyr_de_CO2_Ent tyros 99.4 7.9E-10 1.7E-14 104.6 26.1 242 6-259 117-475 (608)
380 COG1003 GcvP Glycine cleavage 99.3 2.3E-09 5E-14 94.0 22.7 266 61-348 158-450 (496)
381 COG1921 SelA Selenocysteine sy 99.3 7.7E-10 1.7E-14 97.2 19.7 181 35-230 82-268 (395)
382 PRK12566 glycine dehydrogenase 99.2 1.2E-08 2.6E-13 99.8 23.6 279 9-340 119-439 (954)
383 PF05889 SLA_LP_auto_ag: Solub 99.1 5.6E-08 1.2E-12 85.7 21.1 289 36-344 74-389 (389)
384 KOG0629 Glutamate decarboxylas 99.0 1.5E-07 3.3E-12 82.5 21.0 304 29-344 153-508 (510)
385 PF03841 SelA: L-seryl-tRNA se 99.0 8.8E-10 1.9E-14 96.1 6.8 215 35-259 61-296 (367)
386 KOG1405 4-aminobutyrate aminot 99.0 4.8E-08 1E-12 83.6 16.6 215 98-345 254-483 (484)
387 COG4100 Cystathionine beta-lya 98.9 4.2E-07 9.2E-12 76.2 19.8 171 21-206 72-257 (416)
388 PLN02994 1-aminocyclopropane-1 98.9 6.6E-09 1.4E-13 81.1 7.3 65 2-72 86-153 (153)
389 COG1932 SerC Phosphoserine ami 98.7 4.1E-06 8.8E-11 72.7 19.4 286 21-346 57-364 (365)
390 KOG3846 L-kynurenine hydrolase 98.7 3.1E-06 6.8E-11 71.3 17.3 281 34-347 126-463 (465)
391 KOG0628 Aromatic-L-amino-acid/ 98.7 8.9E-06 1.9E-10 72.4 21.0 259 63-346 185-472 (511)
392 KOG2040 Glycine dehydrogenase 98.4 0.00014 3.1E-09 67.5 21.3 310 13-346 574-919 (1001)
393 KOG2040 Glycine dehydrogenase 98.1 0.00032 6.9E-09 65.3 17.5 279 11-340 160-478 (1001)
394 KOG3843 Predicted serine hydro 97.2 0.0018 3.8E-08 54.0 7.9 158 66-230 109-270 (432)
395 PLN02672 methionine S-methyltr 96.3 0.083 1.8E-06 54.1 13.6 185 4-208 422-626 (1082)
396 KOG2790 Phosphoserine aminotra 93.0 3.3 7.2E-05 35.5 12.1 272 37-345 72-368 (370)
397 PF05368 NmrA: NmrA-like famil 83.3 7.3 0.00016 32.7 8.0 86 51-148 13-99 (233)
398 PRK10595 SOS cell division inh 82.8 22 0.00047 28.1 9.9 87 56-147 52-138 (164)
399 KOG1201 Hydroxysteroid 17-beta 80.3 15 0.00032 32.1 8.6 100 34-136 36-143 (300)
400 TIGR00623 sula cell division i 79.4 27 0.00058 27.7 9.1 85 57-147 57-142 (168)
401 COG1105 FruK Fructose-1-phosph 77.3 30 0.00064 30.6 9.7 113 37-153 29-169 (310)
402 COG1184 GCD2 Translation initi 77.1 24 0.00051 31.0 9.0 103 34-148 117-226 (301)
403 PLN02591 tryptophan synthase 76.3 26 0.00055 30.0 8.9 13 75-87 125-137 (250)
404 PRK04296 thymidine kinase; Pro 75.8 11 0.00024 30.6 6.5 94 47-154 18-117 (190)
405 COG0352 ThiE Thiamine monophos 74.2 23 0.00051 29.3 7.9 100 99-208 24-123 (211)
406 COG0159 TrpA Tryptophan syntha 72.9 34 0.00074 29.4 8.7 11 109-119 147-157 (265)
407 PF02310 B12-binding: B12 bind 72.0 19 0.00042 26.4 6.6 65 75-150 22-88 (121)
408 PRK03892 ribonuclease P protei 70.8 58 0.0013 26.8 10.3 106 37-148 61-171 (216)
409 KOG1465 Translation initiation 69.5 78 0.0017 27.7 10.1 105 35-150 161-271 (353)
410 COG0031 CysK Cysteine synthase 68.2 53 0.0011 28.9 9.1 101 21-122 43-152 (300)
411 cd01422 MGS Methylglyoxal synt 67.4 34 0.00073 25.2 6.8 68 75-148 38-106 (115)
412 COG2102 Predicted ATPases of P 67.0 68 0.0015 26.7 9.0 100 38-147 3-116 (223)
413 PRK05678 succinyl-CoA syntheta 66.0 54 0.0012 28.8 8.8 74 66-152 50-125 (291)
414 PF13460 NAD_binding_10: NADH( 65.1 34 0.00073 27.2 7.2 89 40-144 2-90 (183)
415 CHL00200 trpA tryptophan synth 65.1 49 0.0011 28.6 8.3 14 75-88 113-126 (263)
416 PF00290 Trp_syntA: Tryptophan 64.7 44 0.00095 28.8 7.9 82 61-147 117-202 (259)
417 TIGR01470 cysG_Nterm siroheme 63.5 84 0.0018 25.9 11.8 96 34-151 7-103 (205)
418 KOG2741 Dimeric dihydrodiol de 61.9 55 0.0012 29.3 8.0 76 66-153 57-132 (351)
419 TIGR02990 ectoine_eutA ectoine 61.7 85 0.0018 26.7 9.0 78 61-147 121-210 (239)
420 PF02662 FlpD: Methyl-viologen 60.4 33 0.00071 25.7 5.7 57 83-141 28-89 (124)
421 TIGR01019 sucCoAalpha succinyl 59.7 77 0.0017 27.8 8.6 76 65-153 47-124 (286)
422 COG3473 Maleate cis-trans isom 58.9 1E+02 0.0022 25.5 9.9 113 21-151 88-212 (238)
423 PF14258 DUF4350: Domain of un 58.6 49 0.0011 21.6 7.5 60 73-149 10-70 (70)
424 PF13407 Peripla_BP_4: Peripla 58.3 21 0.00045 30.2 5.0 64 75-148 22-85 (257)
425 COG0514 RecQ Superfamily II DN 58.3 1.9E+02 0.0041 28.3 13.0 138 39-207 38-186 (590)
426 COG2870 RfaE ADP-heptose synth 58.1 25 0.00055 32.0 5.4 64 81-151 113-179 (467)
427 COG1066 Sms Predicted ATP-depe 57.5 58 0.0012 30.0 7.5 98 45-148 106-215 (456)
428 PRK09189 uroporphyrinogen-III 56.7 91 0.002 26.2 8.6 77 42-118 100-179 (240)
429 COG1587 HemD Uroporphyrinogen- 55.8 99 0.0021 26.3 8.7 108 21-141 87-197 (248)
430 COG0505 CarA Carbamoylphosphat 55.4 39 0.00084 30.3 6.0 68 61-140 180-249 (368)
431 PRK04148 hypothetical protein; 55.0 93 0.002 23.7 7.5 22 126-148 86-107 (134)
432 PRK08265 short chain dehydroge 54.2 1.4E+02 0.0029 25.4 9.6 56 35-90 5-60 (261)
433 cd06568 GH20_SpHex_like A subg 54.2 32 0.00069 30.8 5.5 68 75-147 25-92 (329)
434 PRK05234 mgsA methylglyoxal sy 54.1 99 0.0022 23.8 9.5 72 72-151 40-114 (142)
435 TIGR01137 cysta_beta cystathio 54.0 1.6E+02 0.0035 27.6 10.6 53 37-89 63-116 (454)
436 cd01563 Thr-synth_1 Threonine 53.7 1.3E+02 0.0029 26.7 9.5 54 36-89 70-124 (324)
437 TIGR02717 AcCoA-syn-alpha acet 52.8 72 0.0016 30.0 7.9 115 34-156 5-134 (447)
438 COG0552 FtsY Signal recognitio 51.6 64 0.0014 28.8 6.8 106 43-153 150-270 (340)
439 COG2515 Acd 1-aminocyclopropan 51.5 1.7E+02 0.0037 25.8 9.2 106 35-140 62-177 (323)
440 cd00532 MGS-like MGS-like doma 51.4 93 0.002 22.6 9.5 95 47-151 12-107 (112)
441 cd02742 GH20_hexosaminidase Be 51.1 32 0.0007 30.3 5.1 68 74-147 22-89 (303)
442 TIGR00289 conserved hypothetic 50.7 1.5E+02 0.0032 24.9 10.5 111 21-144 51-172 (222)
443 TIGR00262 trpA tryptophan synt 50.5 1.4E+02 0.0031 25.6 8.8 55 73-137 107-162 (256)
444 PF01408 GFO_IDH_MocA: Oxidore 50.4 40 0.00088 24.5 4.9 69 69-148 50-118 (120)
445 TIGR00064 ftsY signal recognit 49.6 1.1E+02 0.0024 26.6 8.0 93 52-152 92-202 (272)
446 COG2240 PdxK Pyridoxal/pyridox 49.4 1.2E+02 0.0026 26.4 7.9 32 122-153 79-114 (281)
447 PF10087 DUF2325: Uncharacteri 49.2 91 0.002 22.0 6.7 68 70-147 12-79 (97)
448 COG0074 SucD Succinyl-CoA synt 49.2 70 0.0015 27.8 6.4 81 60-151 44-124 (293)
449 PRK05638 threonine synthase; V 49.0 1.4E+02 0.003 28.0 9.2 54 35-88 111-165 (442)
450 cd02067 B12-binding B12 bindin 48.6 1E+02 0.0023 22.5 7.5 56 75-141 21-77 (119)
451 COG1091 RfbD dTDP-4-dehydrorha 48.2 1.7E+02 0.0037 25.5 8.8 68 97-167 37-114 (281)
452 COG0300 DltE Short-chain dehyd 47.8 1.2E+02 0.0025 26.3 7.7 80 37-119 7-93 (265)
453 cd02072 Glm_B12_BD B12 binding 47.6 1.2E+02 0.0026 22.9 6.9 56 75-141 21-77 (128)
454 cd01561 CBS_like CBS_like: Thi 47.4 1.9E+02 0.0042 25.2 11.1 54 37-90 54-108 (291)
455 cd06562 GH20_HexA_HexB-like Be 46.4 36 0.00078 30.8 4.7 64 74-147 24-87 (348)
456 TIGR01501 MthylAspMutase methy 46.3 1E+02 0.0022 23.5 6.4 57 75-143 23-80 (134)
457 COG0296 GlgB 1,4-alpha-glucan 46.1 29 0.00062 33.9 4.1 33 127-160 212-244 (628)
458 PF04413 Glycos_transf_N: 3-De 45.3 1.2E+02 0.0025 24.6 7.1 111 21-149 3-124 (186)
459 TIGR03573 WbuX N-acetyl sugar 44.2 2.4E+02 0.0052 25.4 10.0 107 36-157 60-174 (343)
460 TIGR02026 BchE magnesium-proto 43.8 1.2E+02 0.0026 29.0 8.0 68 76-152 31-101 (497)
461 PF00265 TK: Thymidine kinase; 43.7 63 0.0014 25.9 5.2 100 43-154 12-114 (176)
462 PRK06372 translation initiatio 43.2 2E+02 0.0043 24.7 8.3 100 36-148 86-190 (253)
463 cd06570 GH20_chitobiase-like_1 42.9 56 0.0012 29.0 5.3 61 75-147 25-85 (311)
464 TIGR00511 ribulose_e2b2 ribose 42.4 2.4E+02 0.0053 24.9 9.6 103 35-149 114-223 (301)
465 COG1435 Tdk Thymidine kinase [ 42.2 97 0.0021 25.4 5.9 97 43-148 15-115 (201)
466 PRK09354 recA recombinase A; P 42.0 96 0.0021 28.0 6.6 24 293-317 271-294 (349)
467 cd04724 Tryptophan_synthase_al 41.8 99 0.0021 26.3 6.4 15 74-88 97-111 (242)
468 PRK08638 threonine dehydratase 41.5 2.6E+02 0.0057 25.0 9.7 52 37-88 76-128 (333)
469 cd06320 PBP1_allose_binding Pe 41.4 62 0.0014 27.5 5.4 65 75-148 23-87 (275)
470 COG0826 Collagenase and relate 41.3 69 0.0015 29.0 5.6 48 98-146 15-65 (347)
471 PF04748 Polysacc_deac_2: Dive 41.3 2.1E+02 0.0045 23.8 9.8 93 46-147 105-206 (213)
472 cd01078 NAD_bind_H4MPT_DH NADP 41.0 1.9E+02 0.0041 23.3 8.6 89 21-118 13-106 (194)
473 PRK11761 cysM cysteine synthas 41.0 2.5E+02 0.0054 24.6 10.0 53 37-89 64-117 (296)
474 TIGR02313 HpaI-NOT-DapA 2,4-di 40.9 1.6E+02 0.0036 25.8 7.9 71 75-151 89-165 (294)
475 PRK13111 trpA tryptophan synth 40.9 1.8E+02 0.0039 25.0 7.9 53 73-138 109-165 (258)
476 PF05127 Helicase_RecD: Helica 40.8 16 0.00035 29.3 1.4 46 44-89 9-55 (177)
477 PRK06721 threonine synthase; R 40.5 2.8E+02 0.0061 25.1 10.0 52 37-88 76-129 (352)
478 COG1519 KdtA 3-deoxy-D-manno-o 40.5 2.4E+02 0.0052 26.2 8.8 113 21-151 32-154 (419)
479 PLN02556 cysteine synthase/L-3 40.4 2.9E+02 0.0062 25.3 9.5 84 37-122 112-196 (368)
480 TIGR02012 tigrfam_recA protein 40.3 74 0.0016 28.4 5.6 24 293-317 266-289 (321)
481 TIGR01138 cysM cysteine syntha 40.2 2.4E+02 0.0052 24.7 8.8 53 37-89 60-113 (290)
482 PRK10886 DnaA initiator-associ 39.8 2.1E+02 0.0045 23.4 7.9 39 101-147 102-140 (196)
483 PLN02565 cysteine synthase 39.8 2.7E+02 0.006 24.8 9.9 52 38-89 69-121 (322)
484 PRK11070 ssDNA exonuclease Rec 39.8 3.2E+02 0.0069 26.8 10.1 100 42-152 52-160 (575)
485 PRK07476 eutB threonine dehydr 39.7 2.7E+02 0.0059 24.7 10.0 51 39-89 70-121 (322)
486 PTZ00187 succinyl-CoA syntheta 39.6 87 0.0019 27.9 5.8 77 66-153 73-150 (317)
487 PLN00125 Succinyl-CoA ligase [ 39.4 1.7E+02 0.0038 25.8 7.7 76 64-152 52-130 (300)
488 COG1603 RPP1 RNase P/RNase MRP 39.3 2.3E+02 0.0051 23.8 8.2 111 37-148 54-167 (229)
489 PF00150 Cellulase: Cellulase 38.7 83 0.0018 26.9 5.8 24 128-152 61-84 (281)
490 COG4221 Short-chain alcohol de 38.3 1.5E+02 0.0032 25.3 6.7 98 37-139 6-110 (246)
491 PLN02735 carbamoyl-phosphate s 37.9 3E+02 0.0065 29.5 10.3 117 21-150 956-1075(1102)
492 PLN00191 enolase 37.9 1.1E+02 0.0025 28.8 6.6 98 44-148 296-393 (457)
493 PF04016 DUF364: Domain of unk 37.6 66 0.0014 24.9 4.3 81 58-147 9-93 (147)
494 PRK06381 threonine synthase; V 37.6 2.9E+02 0.0063 24.4 9.6 54 36-89 63-117 (319)
495 PLN00011 cysteine synthase 37.2 3E+02 0.0065 24.5 10.4 53 37-89 70-123 (323)
496 PRK07048 serine/threonine dehy 37.0 3E+02 0.0065 24.4 9.4 52 37-88 73-125 (321)
497 PF01902 ATP_bind_4: ATP-bindi 36.9 2.3E+02 0.0051 23.6 7.7 98 39-147 4-115 (218)
498 smart00642 Aamy Alpha-amylase 36.6 46 0.00099 26.4 3.4 27 128-155 69-95 (166)
499 PRK10416 signal recognition pa 36.6 3.1E+02 0.0067 24.4 9.5 98 52-153 134-245 (318)
500 COG1023 Gnd Predicted 6-phosph 36.5 1.8E+02 0.0039 24.8 6.8 98 98-208 49-148 (300)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-54 Score=388.91 Aligned_cols=325 Identities=40% Similarity=0.690 Sum_probs=300.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQ-ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~-i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
+|++..|.++|| +++|+++. +++..+.+++ |++|+|+++|+..++.+++++||+|++++|.|..|....+..
T Consensus 60 ~Y~~~~G~~~LR------eaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~ 133 (393)
T COG0436 60 HYTPSAGIPELR------EAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLA 133 (393)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc
Confidence 677999999999 99999999 8898888876 999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCC-CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 81 DATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 81 g~~v~~i~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
|.+++.+++..+ .+|.+|+++|++++++++++|++++||||||.+++.+++++|+++|+++ |++||.||+|.++.|++
T Consensus 134 gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~-~i~ii~DEiY~~l~yd~ 212 (393)
T COG0436 134 GGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREH-DIIIISDEIYEELVYDG 212 (393)
T ss_pred CCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHc-CeEEEEehhhhhcccCC
Confidence 999999998655 4899999999999999999999999999999999999999999999999 99999999999999998
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
..+.++.......++.+.+.|+||.++++|+|+||++++ +++++.+.+.+.....+++.+.|.++.++|+.... ....
T Consensus 213 ~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~ 291 (393)
T COG0436 213 AEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-DEVV 291 (393)
T ss_pred CCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-hHHH
Confidence 766777776655688999999999999999999999999 88999988888888889999999999999998432 4577
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceecC-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 239 SKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
+..++.+++|++.+.+.|.+++|+.+.. |.+++|+|++++... ++.+++++|++++||.+.||..|+.
T Consensus 292 ~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~-----------d~~~f~~~Ll~~~gV~v~PG~~Fg~ 360 (393)
T COG0436 292 EEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELL-----------DSEEFAKKLLEEAGVAVVPGSGFGE 360 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCC-----------CHHHHHHHHHHhCCEEEecccccCC
Confidence 8888999999999999999998899998 789999999998752 8999999999999999999999997
Q ss_pred C---CeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 318 D---TCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 318 ~---~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
+ +++|++++.++++++++++++++.++.+
T Consensus 361 ~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 361 PPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred CCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 5 7999999998899999999999998764
No 2
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-49 Score=363.56 Aligned_cols=326 Identities=23% Similarity=0.358 Sum_probs=287.6
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|++..|.+++| +.+++++. .+|+++++ ++|++|+|+++++..++.+++++||+|++++|+|..+...++.
T Consensus 72 ~~Y~~~~G~~~LR------~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~ 145 (405)
T PRK06207 72 QAYTEYRGDADIR------ELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEF 145 (405)
T ss_pred ccCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHH
Confidence 3588889999999 99999999 77988888 8999999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccC---CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 80 ADATPVILPTRI---SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 80 ~g~~v~~i~~~~---~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
.|.+++.++++. +.++.+|+++|+++++++++++++++||||||.+++.+++++|+++|+++ |++||+||+|+++.
T Consensus 146 ~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~-~~~iI~De~Y~~~~ 224 (405)
T PRK06207 146 FEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRY-GATVIVDQLYSRLL 224 (405)
T ss_pred cCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccccc
Confidence 999999999862 34678999999999988899999999999999999999999999999999 99999999999998
Q ss_pred cCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChH
Q 018665 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
+++....++..+..+++++++++|+||.++++|+|+||+++++++++.+......+..+.+.+.|.++..+++. ...
T Consensus 225 ~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~---~~~ 301 (405)
T PRK06207 225 YDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE---PDG 301 (405)
T ss_pred cCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC---cHH
Confidence 87754455555444468999999999999999999999999999999998887777777888999999999975 246
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
++++..+.++++++.+.+.|++++++.+..|++|+|+|++++... .+..++++.|++++||.+.||..|+
T Consensus 302 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~----------~~~~~~~~~l~~~~gV~v~pG~~F~ 371 (405)
T PRK06207 302 WMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLA----------VSLHDFVKILRLQAGVIVTPGTEFS 371 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccC----------CCHHHHHHHHHHhcCEEEeCchHhC
Confidence 677888888889999999998887888888899999999998521 1678899998866799999999886
Q ss_pred C--CCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 317 D--DTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 317 ~--~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
. ++++||+++.+.+++++++++|++++++++
T Consensus 372 ~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 372 PHTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred CCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 4 579999999988999999999999998764
No 3
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-49 Score=359.16 Aligned_cols=315 Identities=26% Similarity=0.498 Sum_probs=282.5
Q ss_pred CCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCe
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
++.|..++| +++|++++ ++|+++++ ++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.+
T Consensus 67 ~~~G~~~lr------~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~ 140 (399)
T PRK07681 67 TLSGIQEFH------EAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGAT 140 (399)
T ss_pred CCCCcHHHH------HHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCE
Confidence 358999999 99999999 88998898 89999999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.+++++++++.+|++++++.+.++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.+++....
T Consensus 141 ~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~ 219 (399)
T PRK07681 141 SYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKH-NIIVVHDFAYAEFYFDGNKPI 219 (399)
T ss_pred EEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHc-CeEEEEeccchhheeCCCCCC
Confidence 9999998766788999999998888899999999999999999999999999999999 999999999999888765555
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
++..+...++++++++|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..+++. ...++++.++
T Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~ 296 (399)
T PRK07681 220 SFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRN---GAAFCEKNRG 296 (399)
T ss_pred ChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHH
Confidence 6666554457899999999999999999999999999999998876666677999999999999986 3577888889
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CCeE
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCI 321 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~~i 321 (352)
.++++++.+.+.|++. |+.+..+.+|+|+|+++++.. ++.+++++|++++||.+.||..|+. ++++
T Consensus 297 ~~~~~~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~i 364 (399)
T PRK07681 297 IYQERRDTLVDGFRTF-GWNVDKPAGSMFVWAEIPKGW-----------TSLSFAYALMDRANVVVTPGHAFGPHGEGFV 364 (399)
T ss_pred HHHHHHHHHHHHHHHC-CCcccCCCeeeEEEEECCCCC-----------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeE
Confidence 9999999999999987 888878899999999998642 6788999998867999999988864 4799
Q ss_pred EEEeecCHHHHHHHHHHHHHH
Q 018665 322 RISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~ 342 (352)
||+++.+++++++++++|+++
T Consensus 365 Ris~~~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 365 RIALVQDEEVLQQAVENIRNS 385 (399)
T ss_pred EEEecCCHHHHHHHHHHHHHh
Confidence 999998889999999999883
No 4
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-48 Score=356.06 Aligned_cols=320 Identities=32% Similarity=0.595 Sum_probs=284.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|+++.|.+++| +++|+++. ++++.+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 60 ~~Y~~~~G~~~lr------~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~ 133 (384)
T PRK06348 60 TRYTDSGGDVELI------EEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMV 133 (384)
T ss_pred CCCCCCCCcHHHH------HHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc
Confidence 4688999999999 99999998 8899899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.+++.+++++.+|++.+++.++++++++++++||||||.+++.+++++|+++|+++ +++||+||+|.++.+++.
T Consensus 134 g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~ 212 (384)
T PRK06348 134 GGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEY-DLFIISDEVYDGFSFYED 212 (384)
T ss_pred CCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CeEEEEecccccceeCCC
Confidence 9999999886556778999999999988899999999999999999999999999999999 999999999999887642
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
..++..+....+++++++||||.+|++|+|+||+++++++++.+........++++.+.|.++..++.. .+.+.++
T Consensus 213 -~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~ 288 (384)
T PRK06348 213 -FVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKH---RDTIVPL 288 (384)
T ss_pred -ccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC---cHHHHHH
Confidence 345555543357899999999999999999999999999999988877766677899999999999975 3677888
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
+++.++++++.+.+.|++++++.+..+++|+++|++++... .+..++++.+++++||.+.||+.|+. +
T Consensus 289 ~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~----------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~ 358 (384)
T PRK06348 289 IKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTG----------LSSVEFCEKLLKEAHVLVIPGKAFGESGE 358 (384)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCC----------CCHHHHHHHHHHhCCEEEcCchhhccCCC
Confidence 99999999999999999887888888899999999997421 16788999888777999999998865 4
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHH
Q 018665 319 TCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
+++||+++.+.+++++++++|++.
T Consensus 359 ~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 359 GYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred CeEEEEecCCHHHHHHHHHHHHhh
Confidence 799999988889999999998753
No 5
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=9.8e-49 Score=357.77 Aligned_cols=321 Identities=23% Similarity=0.389 Sum_probs=277.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|+++.|..++| +++|+++. ++|+.++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 63 ~Y~~~~G~~~lr------~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~ 136 (388)
T PRK07366 63 GYLLFHGTLDFR------EAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLA 136 (388)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc
Confidence 488889999999 99999999 789888998 6999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.++++..|++++++.+.++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.+++.
T Consensus 137 g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~ 215 (388)
T PRK07366 137 GGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQH-DLVLVHDFPYVDLVFDGE 215 (388)
T ss_pred CCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CeEEEEecchhhcccCCC
Confidence 9999999998666788899999888877889999999999999999999999999999999 999999999999988664
Q ss_pred C-ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 161 T-HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 161 ~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
. .+++..+....+++++++||||.+|++|+|+||+++++++++.+......+..+.++..+.++.+++.. .+++++
T Consensus 216 ~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~---~~~~l~ 292 (388)
T PRK07366 216 VEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTG---PQATVQ 292 (388)
T ss_pred CCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHH
Confidence 3 445555544446789999999999999999999999999999998877665555544444455555543 268899
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+.++.++++++.+.+.|+++ ++.+..|++|+|+|+++++..+ .+..++++.++++.||.+.||..|+.
T Consensus 293 ~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~~~~~~---------~~~~~~~~~l~~~~gv~v~pg~~f~~~~ 362 (388)
T PRK07366 293 QTVQIFRQRRDAFINALHQI-GWPVPLPEATMYVWAKLPEPWQ---------GNSVEFCTQLVAQTGVAASPGSGFGKSG 362 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCcccC---------CCHHHHHHHHHHhCCEEEeCchHhCcCC
Confidence 99999999999999999988 7877788999999999986321 14678888887677999999998864
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 318 DTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
++++||+++.+++++++++++|++++
T Consensus 363 ~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 363 EGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 47999999988899999999998753
No 6
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.7e-48 Score=356.09 Aligned_cols=319 Identities=27% Similarity=0.476 Sum_probs=279.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|+++.|..++| +++|+++. ++|.+++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++.
T Consensus 64 ~~Y~~~~g~~~lr------~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~ 137 (389)
T PRK08068 64 HKYSPFRGYPFLK------EAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVAL 137 (389)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHh
Confidence 4688899999999 99999999 788888888 899999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++.+.++.+|++++++.++++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++
T Consensus 138 ~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~-~~~ii~Deay~~~~~~~ 216 (389)
T PRK08068 138 ARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKH-NIGVVHDFAYGAIGFDG 216 (389)
T ss_pred cCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEehhhhhhccCC
Confidence 99999999997656788899999999988899999999999999999999999999999999 99999999999887765
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++.......++++++.|+||.+|++|+|+||+++++++++.+......+..+.+++.|.++..++.. ...+++
T Consensus 217 ~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~ 293 (389)
T PRK08068 217 QKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLS---DQSCVA 293 (389)
T ss_pred CCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC---cHHHHH
Confidence 43444444333356889999999999999999999999999999998877666656666678888888764 357788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
..++.++++++.+.+.|+++ |+.+..+.+|+|+|+++++.. ++.++.+.|++++||.+.||..|+.
T Consensus 294 ~~~~~~~~~r~~~~~~L~~~-g~~~~~~~g~~~~~v~~~~~~-----------~~~~~~~~l~~~~gi~v~pg~~f~~~~ 361 (389)
T PRK08068 294 ELVARYESRRNAFISACREI-GWEVDAPKGSFFAWMPVPKGY-----------TSEQFADLLLEKAHVAVAPGNGFGEHG 361 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCCCC-----------CHHHHHHHHHHhCCEEEecchHhCccC
Confidence 99999999999999999988 888888889999999998642 6889999998767999999988764
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHH
Q 018665 318 DTCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
++++||+++.+++.+++++++|+++
T Consensus 362 ~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 362 EGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred CCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 5799999998888999999998764
No 7
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.2e-48 Score=356.56 Aligned_cols=321 Identities=30% Similarity=0.575 Sum_probs=284.9
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|+++.|.+++| ++++++++ +++++++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++.
T Consensus 85 ~~Y~~~~G~~~Lr------~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~ 158 (413)
T PLN00175 85 NQYARGFGVPELN------SAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM 158 (413)
T ss_pred CCcCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHH
Confidence 4699999999999 99999999 789888887 799999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++.+ ++.+|+++|++.+.++++++++++||||||.+++.+++++|+++|+++ ++++|+||+|.++.+.+
T Consensus 159 ~g~~~~~v~~~~~-~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~l~~~~ 236 (413)
T PLN00175 159 AGAKIKTVTLRPP-DFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKEN-DVLAFTDEVYDKLAFEG 236 (413)
T ss_pred cCCEEEEEECCcc-cCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEecccCccccCC
Confidence 9999999999753 378999999999988899999999999999999999999999999999 99999999999988765
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
. +.++..+....+++++++||||.++++|+|+||+++++++++.+.........+++.+.|.++.++++. .+.+++
T Consensus 237 ~-~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~---~~~~~~ 312 (413)
T PLN00175 237 D-HISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRA---PESYYE 312 (413)
T ss_pred c-ccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC---CHHHHH
Confidence 3 345555554467899999999999999999999999999999998877666778999999999999976 357889
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+.++.++++++.+.+.|++. |+.+..|++|+|+|++++... ..+..++++.|++++||.+.||..|+.
T Consensus 313 ~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~~f~~~~~~~~~---------~~~~~~~~~~ll~~~gV~v~pg~~F~~~~ 382 (413)
T PLN00175 313 ELKRDYSAKKDILVEGLKEV-GFKVYPSSGTYFVMVDHTPFG---------FENDIAFCEYLIEEVGVAAIPPSVFYLNP 382 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEeccccC---------CCCHHHHHHHHHHhCCEEEeCchHhCCCC
Confidence 99999999999999999987 888888999999999975310 014678999998777999999988742
Q ss_pred ---CCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 318 ---DTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 318 ---~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
++++||+++.+++++++++++|+++++
T Consensus 383 ~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 383 EDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 469999999999999999999999875
No 8
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=6.1e-48 Score=352.09 Aligned_cols=318 Identities=29% Similarity=0.524 Sum_probs=281.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|+++.|..++| +.+|++++ +++++++++ +|++|+|+++++..++.+++++||.|++++|+|..+...++.
T Consensus 61 ~~Y~~~~G~~~lr------~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~ 134 (383)
T TIGR03540 61 HRYPSYEGMLAYR------QAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLF 134 (383)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHh
Confidence 4588889999999 99999999 778877776 699999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++.++++.+|++++++.+.++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|+++.+.+
T Consensus 135 ~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~l~~~~ 213 (383)
T TIGR03540 135 AGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEY-NIIVCHDNAYSEITFDG 213 (383)
T ss_pred cCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHc-CEEEEEecchhhhccCC
Confidence 99999999997666777899999999888899999999999999999999999999999999 99999999999988866
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++..+....++++++.|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..+++. ..++++
T Consensus 214 ~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~ 290 (383)
T TIGR03540 214 YKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNG---PQDVVK 290 (383)
T ss_pred CCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC---CHHHHH
Confidence 55566666544346789999999999999999999999999999888776555567788899999999976 368888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
++++.++++++.+.+.|++. |+.+..+.+|+++|+++++.. ++.++++.|++++||.+.||..|..
T Consensus 291 ~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~ll~~~gi~v~~g~~f~~~~ 358 (383)
T TIGR03540 291 EIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWVPVPEGY-----------TSAEFAARLLEETGVVVTPGVGFGEYG 358 (383)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEEECCCCC-----------CHHHHHHHHHHHCCEEEecchhhCccC
Confidence 99999999999999999998 898888889999999998542 6788999987667999999988864
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHH
Q 018665 318 DTCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
++++||+++.+++++++++++|++
T Consensus 359 ~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 359 EGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred CCeEEEEecCCHHHHHHHHHHHhh
Confidence 479999999888999999998865
No 9
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=3.4e-48 Score=353.17 Aligned_cols=323 Identities=43% Similarity=0.695 Sum_probs=283.7
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|++..|..++| +++|++++ ++|+.++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++.
T Consensus 51 ~~Y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~ 124 (378)
T PRK07682 51 TSYTANAGLLELR------QEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTL 124 (378)
T ss_pred CCCCCCCCcHHHH------HHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHH
Confidence 3588889999999 99999999 778888775 899999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++.++++.+|+++++++++++++++++++||||||.+++.+++++|+++|+++ ++++|+||+|.++.+++
T Consensus 125 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~ 203 (378)
T PRK07682 125 AGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKH-DLIVLSDEIYAELTYDE 203 (378)
T ss_pred cCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHc-CcEEEEehhhhhcccCC
Confidence 99999999986555678999999999988899999999999999999999999999999999 99999999999988865
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
. ..++..+....++++++.|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..+++. ...+++
T Consensus 204 ~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~---~~~~~~ 279 (378)
T PRK07682 204 A-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRA---GNDDVI 279 (378)
T ss_pred C-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhC---ChHHHH
Confidence 3 334444444357899999999999999999999999999999988776555567889999999999976 245688
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
++++.++++++.+.+.|+++ |+.+..|++++++|+.++... .+..++++.|+++.||.+.||..|+.
T Consensus 280 ~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~~----------~~~~~~~~~ll~~~gv~v~pg~~f~~~~ 348 (378)
T PRK07682 280 RMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISSTG----------LSSEEFAEQLLLEEKVAVVPGSVFGESG 348 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCCC----------CCHHHHHHHHHHhCCEEEcCchhhCcCC
Confidence 88999999999999999998 888888999999999875321 16788998887666999999988864
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 318 DTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
++++||+++.+++++++++++|+++++++
T Consensus 349 ~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 349 EGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 58999999998899999999999998765
No 10
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=8.6e-48 Score=351.34 Aligned_cols=317 Identities=31% Similarity=0.564 Sum_probs=280.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..|.+++| ++++++++ ++|+.++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 64 ~Y~~~~G~~~lr------~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~ 137 (385)
T PRK09276 64 QYPSYEGMLEFR------KAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFA 137 (385)
T ss_pred CCCCCCCcHHHH------HHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHc
Confidence 588888999999 99999999 778888776 5999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.+.++.+|++++++.+.++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++.
T Consensus 138 g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~ 216 (385)
T PRK09276 138 GGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKY-DIIVCHDAAYSEIAYDGY 216 (385)
T ss_pred CCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-CcEEEEecchhheecCCC
Confidence 9999999997666778899999998888899999999999999999999999999999999 999999999999887765
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...++..++...+++++++|+||.+|++|+|+||+++++++++.+.+.......+.+.+.|.++..+++. ...++++
T Consensus 217 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~ 293 (385)
T PRK09276 217 KPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG---PQEVVEE 293 (385)
T ss_pred CCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC---cHHHHHH
Confidence 5566666554457789999999999999999999999999999998876655566777889999999875 3678899
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
.++.++++++.+.+.|+++ ++.+..+.+|+++|+++++.. ++.+++++|++++||.+.||..|+. +
T Consensus 294 ~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~v~~~~~~-----------~~~~l~~~ll~~~gi~v~~g~~f~~~~~ 361 (385)
T PRK09276 294 LRKIYQERRDILVEGLRKL-GLEVEPPKATFYVWAPVPKGY-----------TSAEFATLLLDKAGVVVTPGNGFGEYGE 361 (385)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEECCCCC-----------CHHHHHHHHHHhCCEEECCchhhCCCCC
Confidence 9999999999999999988 888888889999999998643 6788999988767999999988764 4
Q ss_pred CeEEEEeecCHHHHHHHHHHHHH
Q 018665 319 TCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
+++||+++.+++++.+++++|++
T Consensus 362 ~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 362 GYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred CeEEEEeCCCHHHHHHHHHHHhh
Confidence 79999999888999999998864
No 11
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-47 Score=350.44 Aligned_cols=326 Identities=26% Similarity=0.457 Sum_probs=280.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|+++.|..++| +.+|+++. ++++.+.++ +|++|+|+++++..++.+++++||.|++++|+|..+...++.
T Consensus 65 ~~Y~~~~G~~~lR------~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~ 138 (403)
T PRK08636 65 HGYSVSKGIYKLR------LAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFIL 138 (403)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHh
Confidence 3588889999999 99999998 779888887 799999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHH----Hhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 80 ADATPVILPTRISENFLLDPKVL----ESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l----~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.|.+++.++++.++++.+|++.+ +++++ .+++++++++||||||.++|.+++++|+++|+++ |++||+||+|
T Consensus 139 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y 217 (403)
T PRK08636 139 AGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKE-RFYIISDIAY 217 (403)
T ss_pred cCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEeccc
Confidence 99999999986555677887754 55553 4788999999999999999999999999999999 9999999999
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccC
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
+++.+++...+++..++...+++++++|+||.+|++|+|+||+++++++++.+.........+++++.|.++..+++.
T Consensus 218 ~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-- 295 (403)
T PRK08636 218 ADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG-- 295 (403)
T ss_pred hhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC--
Confidence 998887655566666654346778899999999999999999999999999988776554566778888888777753
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
...+++++++.++++++.+.+.|++. ++.+..+.+|+|+|+++|+... ..+..++++.+++++||.+.||
T Consensus 296 -~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~~~~~--------~~~~~~l~~~ll~~~gV~v~pg 365 (403)
T PRK08636 296 -DQSCVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIPEPAR--------HLGSLEFSKQLLTEAKVAVSPG 365 (403)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECCCccC--------CCCHHHHHHHHHHhCCEEEecc
Confidence 26788899999999999999999987 7888889999999999986320 0146788888776679999999
Q ss_pred CCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 313 DAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 313 ~~~~~--~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
..|+. ++++||+++.+++++++++++|+++++.+
T Consensus 366 ~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 366 IGFGEYGDEYVRIALIENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred hhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 88864 47999999988899999999999999764
No 12
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.6e-47 Score=354.37 Aligned_cols=331 Identities=21% Similarity=0.371 Sum_probs=280.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|+++.|..++| +++|++++ ++++.+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|
T Consensus 103 ~Y~~~~G~~~lR------~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g 176 (462)
T PLN02187 103 SYGPGAGILPAR------RAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSG 176 (462)
T ss_pred CCCCCCChHHHH------HHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcC
Confidence 588999999999 99999999 88888999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.+++.+++++.+|++.++++++++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.|.+..
T Consensus 177 ~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~-~i~iI~DE~Y~~l~f~~~~ 255 (462)
T PLN02187 177 LEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKL-GIMVISDEVYDRTIFGDNP 255 (462)
T ss_pred CEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHC-CCEEEEeccccccccCCCC
Confidence 999999987667789999999999988899999999999999999999999999999999 9999999999998886654
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcC-hh----HHHHHHhhhhcccc--CCChHHHHHHHHHhcccCCC
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KH----FVAACNKIQSQFTS--GASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~ 234 (352)
..++..+.. ..++++++|+||.++++|+|+||++++ ++ +++.+......+.. +++.+.|.++.++++.. .
T Consensus 256 ~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~--~ 332 (462)
T PLN02187 256 FVSMGKFAS-IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA--D 332 (462)
T ss_pred ceeHHHhcc-CCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcC--c
Confidence 445555443 257899999999999999999999973 33 33455555544433 45899999999999742 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccCCce-ecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
.+++++.++.++++++.+.+.|+++++.. +..|++|+|+|++++.... .+ ..+..+++.+++++.||.+.||.
T Consensus 333 ~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~---~~---~~~~~~~~~~ll~~~gV~v~pG~ 406 (462)
T PLN02187 333 KNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLM---DN---IKDDIDFCVKLAREENLVFLPGD 406 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhC---CC---CCCHHHHHHHHHhhCCEEEECcc
Confidence 58899999999999999999999885544 3467889999998753100 00 01455777777667799999999
Q ss_pred CCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhCCC
Q 018665 314 AFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 314 ~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
.|+.++++||+++.+++++++++++|++++++....
T Consensus 407 ~fg~~~~iRis~~~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 407 ALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred ccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 998889999999999999999999999999877653
No 13
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-47 Score=349.46 Aligned_cols=320 Identities=27% Similarity=0.488 Sum_probs=280.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|+++.|.+++| +++|++++ +++.+++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++.
T Consensus 67 ~~Y~~~~G~~~lr------~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~ 140 (394)
T PRK05942 67 HGYPPFEGTASFR------QAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLI 140 (394)
T ss_pred ccCCCCCCCHHHH------HHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHH
Confidence 3588889999999 99999999 778888887 589999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++.++++.+|++++++.++++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++
T Consensus 141 ~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~ 219 (394)
T PRK05942 141 AGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKY-EIMLVHDLCYAELAFDG 219 (394)
T ss_pred cCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEeccchhhccCC
Confidence 99999999998666788999999999988999999999999999999999999999999999 99999999999988766
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++..+....+++++++||||.+|++|+|+||+++++++++.+.........+++++.|.++..+++. ..++++
T Consensus 220 ~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~ 296 (394)
T PRK05942 220 YQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQL---PDSYLQ 296 (394)
T ss_pred CCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHH
Confidence 54455555543345679999999999999999999999999999998876655667888999999999974 367888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+.++.++++++.+.+.|++. ++.+..+++|+|+|++++... +..+++.++++++||.+.||..|+.
T Consensus 297 ~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~~~~~-----------~~~~~~~~~l~~~gV~v~~g~~f~~~~ 364 (394)
T PRK05942 297 QVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPCPVGM-----------GSTDFALNVLQKTGVVVTPGNAFGEGG 364 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEECCCCC-----------CHHHHHHHHHHHCCEEEeCChhhCcCC
Confidence 89999999999999999887 888888889999999998642 5677888777777999999988853
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 318 DTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
++++||+++.+.+.+.+++++|.++-
T Consensus 365 ~~~iRis~~~~~~~l~~~l~~l~~~~ 390 (394)
T PRK05942 365 EGYVRISLIADCDRLGEALDRLKQAG 390 (394)
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHhh
Confidence 57999999887788999998887754
No 14
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-47 Score=347.68 Aligned_cols=335 Identities=41% Similarity=0.716 Sum_probs=289.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|.++.|.+++| +.+++++. ++|..+.+++|++|+|+++++..++.+++++||.|++++|+|..|...+...
T Consensus 64 ~~Y~~~~G~~~lr------~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~ 137 (402)
T PRK06107 64 TKYTLVNGTPALR------KAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLAN 137 (402)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHc
Confidence 3588999999999 99999999 7788888999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
+..++.++++.++++.+|++++++.++++++++++++|+||||.+++.+++++|+++|++++++++|+||+|+++.+.+.
T Consensus 138 ~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~ 217 (402)
T PRK06107 138 DGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE 217 (402)
T ss_pred CCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC
Confidence 99998998875566789999999999888999999999999999999999999999999843899999999998877665
Q ss_pred CccccccCC-CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 161 THTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 161 ~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..+++.... ...+++++++|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..+++. ...+++
T Consensus 218 ~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~ 294 (402)
T PRK06107 218 PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG---DQSFVT 294 (402)
T ss_pred CCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC---ChHHHH
Confidence 445555543 2246899999999999999999999999999999999887777778999999999999975 257888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCc-ccCCCCCCChHHHHHHHHHccCEEeccCCCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 318 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~ 318 (352)
+.++.++++++.+.+.|++++|+++..+++|+++|++++...+.. ..+. ...+..++++.+++++||.+.||..|+.+
T Consensus 295 ~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~ 373 (402)
T PRK06107 295 ESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGK-VLETDQDVVLYLLDSAGVAVVQGTAYGLS 373 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeeccccccccccccc-CCCCHHHHHHHHHHhCCEEEeCccccCCC
Confidence 999999999999999999887889888999999999885321100 0000 00145678888887789999999999888
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
+++||+++.++|++++++++|++.++++
T Consensus 374 ~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 374 PYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998765
No 15
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.6e-47 Score=348.64 Aligned_cols=331 Identities=20% Similarity=0.345 Sum_probs=276.3
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|+++.|..++| +++|+++. ++|+.+++++|++|+|+++++..++.+++++||.|++++|+|..+...++..
T Consensus 68 ~~Y~~~~G~~~lr------~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~ 141 (409)
T PLN00143 68 NSYAPTGGILPAR------RAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFH 141 (409)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHc
Confidence 3588999999999 99999999 7888899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.+++..+.++.+|+++|+++++++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.+++.
T Consensus 142 g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~~ 220 (409)
T PLN00143 142 HLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKL-GILVIADEVYGHIVFGSK 220 (409)
T ss_pred CCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHc-CCeEEEEccccccccCCC
Confidence 9999999986556788999999999888899999999999999999999999999999999 999999999999888654
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcC-h-hHH------HHHHhhhhccccCCChHHHHHHHHHhcccC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-K-HFV------AACNKIQSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
...++..+.. .+++++++|+||.++++|+|+||++++ + .++ +.+.+.... ...++.+.|.++.++++..
T Consensus 221 ~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~- 297 (409)
T PLN00143 221 PFVPMGLFAS-IVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKT- 297 (409)
T ss_pred CCcchhhhcc-cCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcC-
Confidence 3334443332 468999999999999999999999983 3 332 333333222 2235788999999998742
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCcee-cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
...++++.++.++++++.+.+.|+++++... ..|++|+|+|++++.... .+ ..+..+++..++++.||.+.|
T Consensus 298 -~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~---~~---~~~~~~~~~~ll~~~gV~v~p 370 (409)
T PLN00143 298 -TEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLL---ED---IEDDMEFCLKLAKEESLIILP 370 (409)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhc---CC---CCCHHHHHHHHHHhCCEEEeC
Confidence 2578889999999999999999988754443 367899999999974200 00 014667777776667999999
Q ss_pred CCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhCCC
Q 018665 312 GDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 312 g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
|..|+.++++||+++.+++++++++++|+++++++.+.
T Consensus 371 g~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 371 GVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred ccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 99998889999999998999999999999999877654
No 16
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3e-47 Score=350.29 Aligned_cols=330 Identities=22% Similarity=0.399 Sum_probs=282.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..|..++| ++++++++ +++..+++++|++|+|+++++..++.++.++||+|++++|+|..|...+...|
T Consensus 89 ~Y~~~~G~~~lr------~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g 162 (430)
T PLN00145 89 SYSTCVGLLPAR------RAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSG 162 (430)
T ss_pred CCCCCccCHHHH------HHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcC
Confidence 588889999999 99999999 88888999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.+++..+.+|.+|++.+++.++++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.|++..
T Consensus 163 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~-~i~ii~De~Y~~~~~~~~~ 241 (430)
T PLN00145 163 LEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKL-GILVIADEVYDHLTFGSKP 241 (430)
T ss_pred CEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEeccchhhccCCCC
Confidence 999999987667889999999999988999999999999999999999999999999999 9999999999998886654
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEc--ChhHHH------HHHhhhhccccCCChHHHHHHHHHhcccCC
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKHFVA------ACNKIQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
..++..+.. .+++++++|+||.++++|+|+||+++ ++.+++ .+.... ....+++++.|.++..+++..
T Consensus 242 ~~~~~~~~~-~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~-- 317 (430)
T PLN00145 242 FVPMGVFGE-VAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANT-- 317 (430)
T ss_pred ccchhhhcc-cCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcC--
Confidence 455554443 56899999999999999999999996 334433 333332 223457889999999999752
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceec-CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
..+++++.++.++++++.+.+.|++++++.+. .|++++|+|++++...- .+ ..+..+++..|+++.||.+.||
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~---~~---~~~~~~~~~~ll~~~gV~v~pG 391 (430)
T PLN00145 318 KEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCL---SG---IKDDMDFCCKLAKEESVVVLPG 391 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhc---CC---CCCHHHHHHHHHHhCCEEEeCc
Confidence 25788999999999999999999998888764 79999999999863100 00 0156678888887789999999
Q ss_pred CCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhCCC
Q 018665 313 DAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
..|+.++++||+++.+++++++++++|++++.+.+..
T Consensus 392 ~~fg~~~~lRis~~~~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 392 SALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred cccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence 9999899999999998899999999999999887653
No 17
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=5.3e-47 Score=347.32 Aligned_cols=326 Identities=26% Similarity=0.439 Sum_probs=280.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|+++.|..++| +++|++++ ++|+.++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 63 ~Y~~~~G~~~lr------~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~ 136 (405)
T PRK09148 63 RYSASKGIPGLR------RAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMA 136 (405)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhc
Confidence 588889999999 99999999 779888887 8999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.+..+..+++++.+...++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.+++.
T Consensus 137 g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~~~~~~~ 215 (405)
T PRK09148 137 GGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKH-DIIILSDLAYSEIYFDGN 215 (405)
T ss_pred CCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEeccchhhhcCCC
Confidence 9999999987655554556665554556889999999999999999999999999999999 999999999999887664
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...++..++...+++++++||||.+|++|+|+||+++++++++.+.+.......+++.+.|.++..+++. .+.++++
T Consensus 216 ~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~---~~~~~~~ 292 (405)
T PRK09148 216 PPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG---PQDCIAE 292 (405)
T ss_pred CCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC---cHHHHHH
Confidence 4455555544346788999999999999999999999999999998877766677889999999999975 2578889
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
.++.++++++.+.+.|+++ ++.+..|++|+|+|+++|+... ..+..++.+.++++.||.+.||..|+. +
T Consensus 293 ~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l~~~~~--------~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~ 363 (405)
T PRK09148 293 MRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPIPEAFR--------HLGSLEFSKLLVEKADVAVAPGVGFGEHGD 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEECCCccC--------CCCHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 9999999999999999987 7877788999999999986321 014578888887666999999998864 4
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
+++||+++.+.+++++++++|++++....
T Consensus 364 ~~~Ri~~~~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 364 GYVRIALVENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 79999998888999999999999887653
No 18
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-47 Score=346.19 Aligned_cols=321 Identities=32% Similarity=0.552 Sum_probs=282.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|+++.|.+++| +.+++++. .+|..+++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|
T Consensus 56 ~Y~~~~G~~~lr------~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g 129 (382)
T PRK06108 56 FYTHNLGIPELR------EALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILG 129 (382)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCC
Confidence 588889999999 99999999 67888889999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCC-CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC-C
Q 018665 82 ATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-P 159 (352)
Q Consensus 82 ~~v~~i~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~-~ 159 (352)
.+++.++++.+ .++.+|++++++.++++++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|+++.+. +
T Consensus 130 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~y~~~~~~~~ 208 (382)
T PRK06108 130 ARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRH-GLWIVADEVYERLYYAPG 208 (382)
T ss_pred CEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEehhhhhhccCCC
Confidence 99999999753 4577999999999988899999999999999999999999999999999 9999999999998876 3
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++..+....++++++.|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..++.. ...+++
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~---~~~~~~ 285 (382)
T PRK06108 209 GRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDE---GEDFVA 285 (382)
T ss_pred CCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC---ChHHHH
Confidence 33344444433347899999999999989999999999999999988766555567899999999999976 356788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+.+++++++++.+.+.|++++++.+..+++|+++|+++++.. +..+++++|++++||.+.||..|+.
T Consensus 286 ~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~-----------~~~~~~~~ll~~~gV~v~pg~~f~~~~ 354 (382)
T PRK06108 286 ELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVT-----------DSLALAKRLVDEAGLGLAPGTAFGPGG 354 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCC-----------CHHHHHHHHHHhCCEEEeCchhhCCCC
Confidence 899999999999999999888899888899999999987642 6778999988777999999987753
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 318 DTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
++++|++++.+++++++++++|+++++
T Consensus 355 ~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 355 EGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 579999999988999999999999875
No 19
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-47 Score=347.90 Aligned_cols=324 Identities=35% Similarity=0.598 Sum_probs=284.7
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|+++.|.+++| +.+|++++ .+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 64 ~~Y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~ 137 (391)
T PRK08361 64 THYTPNAGIPELR------EAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIA 137 (391)
T ss_pred CCCCCCCCcHHHH------HHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHc
Confidence 3588899999999 99999999 6788888999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.++++.+|++.+++.++++++++++++|+||||.++|.+++++|+++|+++ ++++|+||+|+++.+++.
T Consensus 138 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~ 216 (391)
T PRK08361 138 EAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDY-NIYILSDEPYEHFLYEGA 216 (391)
T ss_pred CCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CeEEEEEcccccceeCCC
Confidence 9999999998766778999999999988899999999999999999999999999999999 999999999999877654
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...++.... .+++++++|+||.+|++|+|+||+++++++++.+.........+.+.+.|.++..+++.+.. .+++++
T Consensus 217 ~~~~~~~~~--~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~ 293 (391)
T PRK08361 217 KHYPMIKYA--PDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEE 293 (391)
T ss_pred CCCCHhhcC--CCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHH
Confidence 444444332 46889999999999999999999999999999887766555567889999999999986432 356888
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
.++.++++++.+.+.|++++++.+..+++|+++|+++++.. .+..++++.|++++||.+.||..|+. +
T Consensus 294 ~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~----------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~ 363 (391)
T PRK08361 294 MRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETG----------MSSEDFAEWLLEKARVVVIPGTAFGKAGE 363 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCC----------CCHHHHHHHHHHhCCEEEcCchhhCCCCC
Confidence 99999999999999999888888888999999999997421 16788998888767999999998764 4
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+++||+++.+++++++++++|++++++
T Consensus 364 ~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 364 GYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred CEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 799999999888999999999998864
No 20
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=3.6e-47 Score=348.18 Aligned_cols=317 Identities=24% Similarity=0.387 Sum_probs=275.3
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCC-CCCC-cEEEeCChHHHHHHHHHHhcCC---CCEEEecCCCCCChHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLS-YTPD-QILVSNGAKQSILQAVLAVCSP---GDEVIIPAPFWVSYPE 75 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~-~~~~-~i~~~~g~~~a~~~~~~~l~~~---~~~vl~~~~~~~~~~~ 75 (352)
..|+++.|..++| +.+|+++. ++|+. ++++ +|++|+|+++++..++.+++++ ||.|++++|+|..+..
T Consensus 59 ~~Y~~~~G~~~lr------~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~ 132 (396)
T PRK09147 59 ASYPTTAGLPALR------EAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG 132 (396)
T ss_pred cCCCCCCCCHHHH------HHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH
Confidence 4588889999999 99999999 77987 8885 8999999999999999999998 8999999999999999
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
.++..|.+++.+|++.+++|.+|++.+++.+.++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++
T Consensus 133 ~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~ 211 (396)
T PRK09147 133 AALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRY-GFVIASDECYSEI 211 (396)
T ss_pred HHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHc-CeEEEeecccccc
Confidence 999999999999998667788999999988877899999999999999999999999999999999 9999999999998
Q ss_pred ccCCC-Cccccc----cCC-CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhc
Q 018665 156 IYAPA-THTSFA----SLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALG 229 (352)
Q Consensus 156 ~~~~~-~~~~~~----~~~-~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 229 (352)
.+++. ...+.. ... ..++++++++|+||.++++|+|+||+++++++++.+.......+.+++.+.|.++.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~ 291 (396)
T PRK09147 212 YFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWN 291 (396)
T ss_pred ccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhc
Confidence 77653 111211 111 125799999999999999999999999999999998877665566788899998888886
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
. .+++.+.++.++++++.+.+.|++. +.+..|++|+|+|+++| . +..++++.|+++.||.+
T Consensus 292 ~----~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~-~------------~~~~~~~~ll~~~gv~v 352 (396)
T PRK09147 292 D----EAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVP-G------------DDTEFARRLYADYNVTV 352 (396)
T ss_pred c----hhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECC-C------------CHHHHHHHHHHhCCEEE
Confidence 4 6788889999999999999999864 56667899999999998 2 66788888876679999
Q ss_pred ccCCCCCC--------CCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 310 VPGDAFGD--------DTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 310 ~~g~~~~~--------~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
.||..|+. .+++||+++.+++++++++++|++++.
T Consensus 353 ~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 353 LPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred eCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 99987752 469999999988999999999998874
No 21
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3.8e-47 Score=344.55 Aligned_cols=315 Identities=23% Similarity=0.356 Sum_probs=280.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|++..|.+++| +.+|++++ .+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.
T Consensus 57 ~Y~~~~G~~~lr------~~ia~~~~----~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~ 126 (373)
T PRK07324 57 TYGWIEGSPEFK------EAVASLYQ----NVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGA 126 (373)
T ss_pred cCCCCCCCHHHH------HHHHHHhc----CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCC
Confidence 588999999999 99999985 25679999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++.++++.+|++++++.++++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+.+. .
T Consensus 127 ~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~-~~~ii~De~y~~l~~~~~-~ 204 (373)
T PRK07324 127 EVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSV-DAYVLSDEVYRPLDEDGS-T 204 (373)
T ss_pred EEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEccccccccCCC-C
Confidence 99999998767788999999999988999999999999999999999999999999999 999999999998877543 2
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.++.. ..++++++.|+||.+|++|+|+||+++++++++.+.+.....+.+.+.+.+.++..+++. ....+++.+
T Consensus 205 ~s~~~---~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~---~~~~l~~~~ 278 (373)
T PRK07324 205 PSIAD---LYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEH---RDAILERNR 278 (373)
T ss_pred CChhh---ccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC---HHHHHHHHH
Confidence 33333 246789999999999999999999999999999999888776777888999988888875 356788888
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEE
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 322 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iR 322 (352)
+.++++++.+.+.|++.+++.+..|.+|+++|+.++... +..+++++|++++||.+.||+.|+.++++|
T Consensus 279 ~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~-----------~~~~~~~~ll~~~gv~v~pg~~F~~~~~iR 347 (373)
T PRK07324 279 KIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM-----------PSEDFCLKLLKETGVLLVPGNRFDLEGHVR 347 (373)
T ss_pred HHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCC-----------CHHHHHHHHHHhcCEEEECccccCCCCeEE
Confidence 999999999999999877888888999998888887532 678899998877799999999998889999
Q ss_pred EEeecCHHHHHHHHHHHHHHHhhh
Q 018665 323 ISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 323 i~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
|+++.+++.+++++++|+++++++
T Consensus 348 is~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 348 IGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred EEecCCHHHHHHHHHHHHHHHHhc
Confidence 999998899999999999999865
No 22
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-47 Score=346.53 Aligned_cols=325 Identities=27% Similarity=0.436 Sum_probs=281.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCC-CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLS-YTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~-~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
.|+ +.|..++| +++|+++. ++|+. ++++ +|++|+|+++++..++.+++++||.|+++.|+|..+...++.
T Consensus 77 ~Y~-~~G~~~lr------~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~ 149 (410)
T PRK06290 77 GYA-DNGIQEFK------EAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKY 149 (410)
T ss_pred CCC-CCCcHHHH------HHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHH
Confidence 364 58999999 99999999 77887 8886 799999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.+++++++++.+|++++++.+.++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.+++
T Consensus 150 ~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~-~~~iI~DEaY~~~~~~~ 228 (410)
T PRK06290 150 YGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKEN-NIIVVQDAAYAALTFDG 228 (410)
T ss_pred cCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEecchhhceeCC
Confidence 99999999998767788899999998888899999999999999999999999999999999 99999999999987765
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
. ..++..+....+++++++|+||.+|++|+|+||+++++++++.+......+..+.+.+.|.++..+++. .++++
T Consensus 229 ~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~----~~~~~ 303 (410)
T PRK06290 229 K-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDH----PEITE 303 (410)
T ss_pred C-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhC----cHHHH
Confidence 2 345555544356789999999999999999999999999999998877666667778899999999986 46788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+.++.++++++.+.+.|++. |+.+..+++|+++|+++|+....... ..++.+++++|++++++.+.||+.+ ++
T Consensus 304 ~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~lp~~~~~~~~----~~~~~~~~~~Ll~~~~v~~~p~~~~--~~ 376 (410)
T PRK06290 304 KIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVKAPKGTKSGIK----FENAEEFSQYLIKEKLISTVPWDDA--GH 376 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEECCCccccCCC----CCCHHHHHHHHHHhCCEEEECCccc--cC
Confidence 89999999999999999998 88888889999999999864210000 0167899999998888888888755 47
Q ss_pred eEEEEeec---CHHHHHHHHHHHHHHHhhhC
Q 018665 320 CIRISYAA---SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 320 ~iRi~~~~---~~~~l~~~~~~l~~~~~~~~ 347 (352)
++||+++. ++++-+++++.|++.+.++.
T Consensus 377 ~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 377 FLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred eEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 99999995 77899999999999987653
No 23
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=6e-47 Score=347.92 Aligned_cols=329 Identities=24% Similarity=0.411 Sum_probs=281.6
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hc------CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-EN------GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP 74 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~------~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~ 74 (352)
..|+++.|..++| +++|++++ ++ +..+++++|++|+|+++++..++.+++++||+|+++.|+|..+.
T Consensus 69 ~~Y~~~~G~~~Lr------~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~ 142 (412)
T PTZ00433 69 NGYPPTVGSPEAR------EAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYE 142 (412)
T ss_pred CCCCCCCCcHHHH------HHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHH
Confidence 4588888999999 99999998 44 46678999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
..++..|.+++.++++.+.++.+|++++++.++++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.+
T Consensus 143 ~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~ 221 (412)
T PTZ00433 143 TVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEEL-RLPLISDEIYAG 221 (412)
T ss_pred HHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CCeEEEeccccc
Confidence 9999999999999997666788999999999988899999999999999999999999999999999 999999999999
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEc--C----hhHHHHHHhhhhccccCCChHHHHHHHHHh
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--P----KHFVAACNKIQSQFTSGASSISQKAGVAAL 228 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 228 (352)
+.+.+....++..+.. ..++++++||||.+|++|+|+||+++ + +++++.+..... ...+++++.|.++..++
T Consensus 222 ~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l 299 (412)
T PTZ00433 222 MVFNGATFTSVADFDT-TVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEAL 299 (412)
T ss_pred cccCCCCccchhhccC-CCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHH
Confidence 8876544445555543 23579999999999999999999996 2 356776666543 23568999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 229 GLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
... ...++++.++.++++++.+.+.|+++.++.+..|++|+|+|++++...- .+ ..+..++++.|++++||.
T Consensus 300 ~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~---~~---~~~~~~~~~~ll~~~gV~ 371 (412)
T PTZ00433 300 LNT--PQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKF---RD---IKSDVEFYEKLLEEENVQ 371 (412)
T ss_pred hcC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhc---CC---CCCHHHHHHHHHHhcCEE
Confidence 752 2678999999999999999999998767888889999999999864100 00 014678999998767999
Q ss_pred eccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 309 LVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 309 i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.||..|+.++++||+++.+++++++++++|.++++..+
T Consensus 372 v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 372 VLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred EeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 999999988899999999988999999999999998765
No 24
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=7e-47 Score=345.45 Aligned_cols=324 Identities=26% Similarity=0.497 Sum_probs=282.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|++..|.+++| ++++++++ .+|++++++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++.
T Consensus 57 ~~Y~~~~G~~~lr------~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~ 130 (387)
T PRK08912 57 NQYPPMMGLPELR------QAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRR 130 (387)
T ss_pred CCCCCCCCcHHHH------HHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHH
Confidence 3588889999999 99999999 778888888 999999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++. .++.+|++++++.++++++++++++||||||.++|.+++++|+++|+++ |+++|+||+|+++.+++
T Consensus 131 ~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~ 208 (387)
T PRK08912 131 AGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRH-DAVAICDEVWEHVVFDG 208 (387)
T ss_pred cCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CeEEEEhhhhhhcccCC
Confidence 999999999863 3567999999999988899999999999999999999999999999999 99999999999888766
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++..+....+++++++|+||.+|++|+|+||+++++++++.+........++.++..+.++..++.. ..++++
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~ 285 (387)
T PRK08912 209 RRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGK---PDDYFE 285 (387)
T ss_pred CCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhC---CHHHHH
Confidence 44455555544357899999999999999999999999999999988776655566777788888888764 367788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+.++.++++++.+.+.|+.. |+.+..+.+++++|++++.... ..+..++++.|+++.||.+.||..|+.
T Consensus 286 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~~--------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~ 356 (387)
T PRK08912 286 GMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLGL--------AEDDVAFCRRLVEEAGVAAIPVSAFYEED 356 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccccCC--------CCCHHHHHHHHHhcCCEEEecchhhCCCC
Confidence 99999999999999999988 8888888899999999975200 016778999988777999999988742
Q ss_pred --CCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 318 --DTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 318 --~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
.+++||+++.+++++++++++|++++++
T Consensus 357 ~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 357 PVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred CCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 4799999999889999999999998753
No 25
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-46 Score=343.77 Aligned_cols=318 Identities=29% Similarity=0.522 Sum_probs=280.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|+++.|.+++| +.+|++++ ++|+.+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|
T Consensus 64 ~Y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g 137 (387)
T PRK08960 64 RYTAARGLPALR------EAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVE 137 (387)
T ss_pred ccCCCCCCHHHH------HHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcC
Confidence 588899999999 99999999 88988999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++.++++.+|++++++.++++++++++++||||||.++|.+++++|+++|+++ |+++|+||+|.++.+++.
T Consensus 138 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~Y~~~~~~~~- 215 (387)
T PRK08960 138 GAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRAR-GGHLVVDEIYHGLTYGVD- 215 (387)
T ss_pred CeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CCEEEEEccccccccCCC-
Confidence 999999997666788999999999988889999999999999999999999999999999 999999999998877543
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..++... .+++++++|+||.+|++|+|+||+++++++++.+......+..++|.+.|.++.+++... ...++++.
T Consensus 216 ~~~~~~~---~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~l~~~ 290 (387)
T PRK08960 216 AASVLEV---DDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPE--TLAILEAR 290 (387)
T ss_pred CCChhhc---cCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC--cHHHHHHH
Confidence 2333332 468999999999999999999999999999999988777677778999999999998642 25788889
Q ss_pred HHHHHHHHHHHHHHhcccCCcee-cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC---
Q 018665 242 VKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--- 317 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--- 317 (352)
++.++++++.+.+.|+++ ++.+ ..|.+|+|+|+++++.. .+..+++++|++++||.+.||..|+.
T Consensus 291 ~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~~~----------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~ 359 (387)
T PRK08960 291 RAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADISAFG----------GDAFAFCRHFLETEHVAFTPGLDFGRHQA 359 (387)
T ss_pred HHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEeccccC----------CCHHHHHHHHHHhCCEEEcCchHhCCCCC
Confidence 999999999999999987 7665 46889999999998621 16788988888777999999998864
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 318 DTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
++++||+++.+.+.+++++++|+++++
T Consensus 360 ~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 360 GQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 369999999988999999999998775
No 26
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.5e-46 Score=344.73 Aligned_cols=330 Identities=22% Similarity=0.380 Sum_probs=280.7
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|+++.|.+++| ++++++++ ++|+.+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 67 ~~Y~~~~G~~~lr------~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~ 140 (409)
T PLN02656 67 NGYAPTVGLPQAR------RAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFR 140 (409)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHc
Confidence 3588999999999 99999999 7888889999999999999999999999999999999999999999899999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.+++..++++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++ |++||+||+|.++.+++.
T Consensus 141 g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~ 219 (409)
T PLN02656 141 HLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKL-KILVIADEVYGHLAFGSN 219 (409)
T ss_pred CCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEehhhhhcccCCC
Confidence 9999999997556788999999999988899999999999999999999999999999999 999999999999988765
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcC--------hhHHHHHHhhhhccccCCChHHHHHHHHHhcccC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP--------KHFVAACNKIQSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
...++..+.. ..++++++||||.++++|+|+||++++ +++++.+...... ..+++.+.|.++..+++..
T Consensus 220 ~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~- 296 (409)
T PLN02656 220 PFVPMGVFGS-IVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILEQT- 296 (409)
T ss_pred CcccHHHhcc-cCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcC-
Confidence 4445444432 468999999999999999999999983 5788887765443 2467899999999999752
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCcee-cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
.+.++++.++.++++++.+.+.|+.++++.. ..|++|+|+|++++...- .+ ..+..+++..++++.||.+.|
T Consensus 297 -~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~---~~---~~~~~~~~~~~l~~~gV~v~p 369 (409)
T PLN02656 297 -DESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLL---ED---ISDDIDFCFKLAREESVIILP 369 (409)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhc---CC---CCCHHHHHHHHHHhCCEEEec
Confidence 2578899999999999999999998755543 478899999999863200 00 013445655555566999999
Q ss_pred CCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 312 GDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 312 g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
|+.|+.++++||+++.+++++++++++|++++...++
T Consensus 370 g~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 370 GTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred chhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999888999999999999999999999999987664
No 27
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.7e-46 Score=342.07 Aligned_cols=318 Identities=26% Similarity=0.471 Sum_probs=274.7
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|+++.|..++| +.+++++. .+|....+ ++|++|+|+++++..++.+++++||+|+++.|+|..+...++.
T Consensus 60 ~~Y~~~~G~~~lr------~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~ 133 (384)
T PRK12414 60 NQYAPMAGIAALR------EALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRL 133 (384)
T ss_pred CCcCCCCCcHHHH------HHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHH
Confidence 4588999999999 99999998 77877665 6899999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++. +++.+|++.+++.++++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++
T Consensus 134 ~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~-~~~ii~De~Y~~~~~~~ 211 (384)
T PRK12414 134 QGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNT-DIVILSDEVYEHVVFDG 211 (384)
T ss_pred cCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHC-CeEEEEhhhhhhccCCC
Confidence 999999999864 4577999999999988899999999999999999999999999999999 99999999999988876
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++..++...++++++.|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..+++. .....
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~----~~~~~ 287 (384)
T PRK12414 212 ARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAE----PASYL 287 (384)
T ss_pred CCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcC----ChHHH
Confidence 54445555443356899999999999999999999999999999998877666678999999999999976 23344
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+.++.++++++.+.+.|++. |+.+.++.+|+++|+++++... .+..+++..++++.||.+.||..|+.
T Consensus 288 ~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~---------~~~~~~~~~~l~~~gV~v~pg~~f~~~~ 357 (384)
T PRK12414 288 GLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHFSD---------ESDSDFVLRLIRDARVATIPLSAFYTDG 357 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcccccCC---------CCHHHHHHHHHHhCCEEEecchhhcCCC
Confidence 67788999999999999987 8888888999999998865210 14566776666667999999998852
Q ss_pred --CCeEEEEeecCHHHHHHHHHHHHH
Q 018665 318 --DTCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 318 --~~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
.+++||+++.+++++++++++|.+
T Consensus 358 ~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 358 TDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred CCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 468999999998999999999875
No 28
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=7.5e-47 Score=350.39 Aligned_cols=330 Identities=20% Similarity=0.340 Sum_probs=275.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCC--CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH-
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGL--SYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR- 78 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~--~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~- 78 (352)
.|++..|.+++| +++|++++ +++. ++++++|++|+|+++++..++.+++++||.|++++|+|..+...++
T Consensus 81 ~Y~~~~G~~~LR------~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~ 154 (468)
T PLN02450 81 LFQDYHGLPAFK------NALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKW 154 (468)
T ss_pred cCCCCCChHHHH------HHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhh
Confidence 488888999999 99999999 6664 4688999999999999999999999999999999999999988888
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
..|.+++.++++.++++.+|++++++++++ +++++++++||||||.+++.+++++|+++|+++ |++||+||+|
T Consensus 155 ~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~-~~~iI~DE~Y 233 (468)
T PLN02450 155 RTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAK-NIHLISDEIY 233 (468)
T ss_pred cCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEEccc
Confidence 589999999987667788899999988753 789999999999999999999999999999999 9999999999
Q ss_pred cccccCCCCccccccCC--------CCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhhhhccccCCChHHHHH
Q 018665 153 EHIIYAPATHTSFASLP--------GMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQFTSGASSISQKA 223 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~--------~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
+++.|++....+..... ...+++++++||||.+|++|+|+||++++++ +++.+.+.... ...|.+.|.+
T Consensus 234 ~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~Q~a 311 (468)
T PLN02450 234 SGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSF--GLVSSQTQYL 311 (468)
T ss_pred cccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHH
Confidence 98877654333433221 1357899999999999999999999999865 56655554322 3478899999
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
+..+++++.....++++.++.++++++.+.+.|+++ |+.+..+.+|+|+|++++...... . .....++.+.|++
T Consensus 312 ~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~flwi~l~~~~~~~--~---~~~~~~l~~~ll~ 385 (468)
T PLN02450 312 LSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLFCWVDMRHLLKSN--T---FEAEMELWKKIVY 385 (468)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEEEEEEchHhcCcC--C---chHHHHHHHHHHH
Confidence 999998743323467888999999999999999998 888888999999999997542100 0 0123567888887
Q ss_pred ccCEEeccCCCCCC--CCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 304 KAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 304 ~~gi~i~~g~~~~~--~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.||.+.||+.|+. ++++||+++. +++++++++++|++++++.+
T Consensus 386 ~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 386 EVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred hCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHhcc
Confidence 77999999998864 6899999996 88999999999999998765
No 29
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-46 Score=342.63 Aligned_cols=328 Identities=48% Similarity=0.787 Sum_probs=287.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..|..++| +.++++++ +++..+++++|++|+|+++++..++.+++++||+|++++|+|..+..+++..|
T Consensus 63 ~Y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g 136 (393)
T PRK05764 63 KYTPAAGIPELR------EAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAG 136 (393)
T ss_pred CcCCCCChHHHH------HHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcC
Confidence 588899999999 99999998 77877888999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++.++++.+|++++++.++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+.+.+.+..
T Consensus 137 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~ 215 (393)
T PRK05764 137 GVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEH-DIWVLSDEIYEKLVYDGAE 215 (393)
T ss_pred CEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEeccccceeeCCCC
Confidence 999999998666788999999999988899999999999999999999999999999999 9999999999988776544
Q ss_pred ccccccC-CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 162 HTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 162 ~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
..++..+ ....+++++++|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..+++. ...++++
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~ 292 (393)
T PRK05764 216 FTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG---PQDEVEE 292 (393)
T ss_pred cccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC---ChHHHHH
Confidence 4455444 23357899999999999999999999999999999998877666678899999999999973 2577888
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCe
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 320 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~ 320 (352)
.++.++++++.+.+.|++++++.+..+++++++|++++...... + .++.++.+.+++++||.+.||..|+.+++
T Consensus 293 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~--~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~ 366 (393)
T PRK05764 293 MRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKS--I----TDSLEFAEALLEEAGVAVVPGIAFGAPGY 366 (393)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccc--c----CCHHHHHHHHHHhCCEEEccccccCCCCE
Confidence 89999999999999999988899888899999999987642100 0 03578888888777999999998877899
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 321 IRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
+||+++.+++++++++++|++++++.
T Consensus 367 vRis~~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 367 VRLSYATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998754
No 30
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.8e-47 Score=348.47 Aligned_cols=332 Identities=22% Similarity=0.399 Sum_probs=278.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~--~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~ 78 (352)
++|.+..|..++| +++|++++ +++ .++++++|++|+|+++++..++.+++++||.|+++.|+|..+...+.
T Consensus 89 ~~y~~~~G~~~LR------~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~ 162 (447)
T PLN02607 89 ALFQDYHGLKSFR------QAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR 162 (447)
T ss_pred hccCCCcchHHHH------HHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH
Confidence 4688889999999 99999999 555 35789999999999999999999999999999999999999988776
Q ss_pred -hcCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 79 -IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 79 -~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
..|.+++.++++.++++.+|++.+++++++ +++++++++||||||.++|.+++++|+++|+++ |+.+|+||+
T Consensus 163 ~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~-~i~lI~DEi 241 (447)
T PLN02607 163 WRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK-NIHLVSDEI 241 (447)
T ss_pred hcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CCEEEEecc
Confidence 689999999987666778999999998863 788999999999999999999999999999999 999999999
Q ss_pred ccccccCCCCccccccCC------CCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHH
Q 018665 152 YEHIIYAPATHTSFASLP------GMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAG 224 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
|..+.|++....++..+. ...++++++.|+||.+|++|+|+||+++ ++.+++.+...... ..+|++.|.++
T Consensus 242 Ya~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~--~~~s~~~q~~~ 319 (447)
T PLN02607 242 YSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--TLVSSQTQHLL 319 (447)
T ss_pred ccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhc--CCCCHHHHHHH
Confidence 998877654445544321 1146899999999999999999999998 66777776655332 24788899999
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
..++++....+.++++.+++++++++.+.+.|++. |+.+..+.+|+|+|+++++...... .....++.++++++
T Consensus 320 ~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L~~~~~~~~-----~~~e~~l~~~ll~~ 393 (447)
T PLN02607 320 ASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNLSPLLETPT-----REGELALWDSILRE 393 (447)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEchHhhcCCC-----chhHHHHHHHHHHh
Confidence 99998743324667788889999999999999987 8888889999999999975421100 01245788888877
Q ss_pred cCEEeccCCCCCC--CCeEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 305 AQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 305 ~gi~i~~g~~~~~--~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.||.+.||..|+. ++|+||+++. +++++++++++|.+++++.+.
T Consensus 394 ~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 394 VKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred CCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 7999999998864 7899999997 899999999999999987665
No 31
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-46 Score=340.26 Aligned_cols=322 Identities=32% Similarity=0.603 Sum_probs=280.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYT-PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..|..++| +.+++++. ..|..++ +++|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 60 ~Y~~~~G~~~lr------~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~ 133 (389)
T PRK05957 60 KYQAVQGIPPLL------EAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMA 133 (389)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc
Confidence 488889999999 99999998 6787776 678999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++.+ .++.+|++++++.++++++++++++||||||.++|.+++++|+++|+++ |+++|+||+|.++.+++.
T Consensus 134 g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~li~De~y~~~~~~~~ 210 (389)
T PRK05957 134 GCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEH-GIYHISDEAYEYFTYDGV 210 (389)
T ss_pred CCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEeccchhccCCCC
Confidence 9999999885 4567999999999988899999999999999999999999999999999 999999999999887653
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...+...+....++++++.|+||.+|++|+|+||+++++++++++.........+++.+.|.++..+++. ...++++
T Consensus 211 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~ 287 (389)
T PRK05957 211 KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQV---GKSYCQQ 287 (389)
T ss_pred CccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC---ChHHHHH
Confidence 3334444434457899999999999999999999999999999998877666667888999999999975 2467888
Q ss_pred HHHHHHHHHHHHHHHhcccCCc-eecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 241 MVKAFRERRDFLVKSFGELEGV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
.++.++++++.+.+.|++++++ .+..+.+|+++|++++... ++.+++++|++++||.+.||..|+.
T Consensus 288 ~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~ 356 (389)
T PRK05957 288 HLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDL-----------NDFELVKQLIREYRVAVIPGTTFGMKN 356 (389)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCC-----------ChHHHHHHHHHHCCEEEccchhhCCCC
Confidence 8888999999999999987664 6777888999999987542 7889999998767999999998865
Q ss_pred CCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 318 DTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 318 ~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
++++||+++. +.+++++++++|.+.++++.
T Consensus 357 ~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 357 GCYLRIAYGALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred CCEEEEEEecCCHHHHHHHHHHHHHHHHhhh
Confidence 4599999986 78999999999999887653
No 32
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2e-46 Score=343.83 Aligned_cols=326 Identities=22% Similarity=0.358 Sum_probs=278.5
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++.|..++| +++++++++.++.+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.
T Consensus 68 ~Y~~~~g~~~lr------~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~ 141 (401)
T TIGR01264 68 GYAPTVGALSAR------EAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGI 141 (401)
T ss_pred CCCCCCCCHHHH------HHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCC
Confidence 588999999999 99999999667778899999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++.+.++.+|++.+++.++++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++...
T Consensus 142 ~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~ 220 (401)
T TIGR01264 142 EVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQ-CLPIIADEIYGDMVFSGATF 220 (401)
T ss_pred EEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEhhhhhhccCCccc
Confidence 99999987666778999999999888889999999999999999999999999999999 99999999999988876544
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcCh------hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK------HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
.++..+.. ..++++++||||.++++|+|+||+++++ ++++.+..... ...+++++.|.++..+++.. .++
T Consensus 221 ~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~--~~~ 296 (401)
T TIGR01264 221 EPLASLSS-TVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT--PQE 296 (401)
T ss_pred ccHHHcCC-CCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC--cHH
Confidence 55555543 2468999999999999999999999864 34444444332 23567899999999999752 268
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
++++.++.++++++.+.+.|++++++.+..|++|+|+|++++...- . ...+..++++.+++++||.+.||+.|+
T Consensus 297 ~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~---~---~~~~~~~~~~~l~~~~gI~v~pg~~f~ 370 (401)
T TIGR01264 297 YFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHF---P---EFKNDVEFTERLVAEQSVFCLPGSCFE 370 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEeccccc---C---CCCCHHHHHHHHHHhCCEEEeCchhcC
Confidence 8999999999999999999998878887789999999999764100 0 001567888888766799999999888
Q ss_pred CCCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 317 DDTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 317 ~~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
.++++|++++.+++++++++++|.+++++
T Consensus 371 ~~~~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 371 YPGFFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred CCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 88999999999889999999999998865
No 33
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.4e-46 Score=346.71 Aligned_cols=333 Identities=21% Similarity=0.340 Sum_probs=272.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH-HHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~-~~~~ 80 (352)
.|++..|.+++| +++|+++. ++|+.+++++|++|+|+++++..++. ++.+||.|++++|+|+.+... ....
T Consensus 68 ~Y~~~~G~~~LR------eaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~ 140 (433)
T PRK06855 68 GYCPTKGVLETR------EFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHA 140 (433)
T ss_pred CCCCCCCCHHHH------HHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhc
Confidence 589999999999 99999999 77999999999999999999998875 788999999999999987754 3456
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhcc--CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
|.+++.+++++++++.+|+++|+++++ ++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.|.
T Consensus 141 g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~ 219 (433)
T PRK06855 141 GYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREY-DLFIICDEIYNNIVYN 219 (433)
T ss_pred CCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccccccC
Confidence 889999998766778899999999986 3678899999999999999999999999999999 9999999999999887
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcC-----h---hHHHHHHhhhhccccCCChHHHHHHHHHhcc
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-----K---HFVAACNKIQSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
+....++..+..+ .++++++||||.++++|+|+||++++ + .+++.+..... ...+++.+.|.++.++++.
T Consensus 220 ~~~~~sl~~~~~~-~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~ 297 (433)
T PRK06855 220 GKKTVPLSEVIGD-VPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSH 297 (433)
T ss_pred CCCCCCHHHHcCc-CCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcC
Confidence 6555566655432 36799999999998899999999973 2 23333333222 2345788999999999986
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCC----------------CCCCh
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG----------------KIENS 294 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~----------------~~~~~ 294 (352)
+.. +.++++.++.++++++.+.+.|++++++.+..|++|+|+|+++|+.......+.. ...+.
T Consensus 298 ~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (433)
T PRK06855 298 PEY-KNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPD 376 (433)
T ss_pred CcH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCch
Confidence 432 5788999999999999999999988788888899999999999864210000000 00135
Q ss_pred HHHHHHHHHccCEEeccCCCCCC-CCeEEEEeec-CHHHHHHHHHHHHHHHhhh
Q 018665 295 ESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAA-SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~~~~-~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~ 346 (352)
.+++..++++.||.+.||..|+. ..++||+++. +++++++++++|+++++++
T Consensus 377 ~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 377 KRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred HHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHHHHHH
Confidence 67777777778999999999864 3479999997 8999999999999999764
No 34
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.3e-46 Score=349.75 Aligned_cols=332 Identities=21% Similarity=0.360 Sum_probs=274.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~--~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~ 78 (352)
..|++..|.+++| +++|++++ ++| +++++++|++|+|+++++..++.+++++||.|++++|+|..+...++
T Consensus 88 ~~y~~~~G~~~LR------~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~ 161 (496)
T PLN02376 88 ANFQDYHGLKKFR------QAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLR 161 (496)
T ss_pred hccCCCCCcHHHH------HHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH
Confidence 3588899999999 99999999 777 66889999999999999999999999999999999999999998787
Q ss_pred -hcCCeEEEecccCCCCcccCHHHHHhhc------cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 79 -IADATPVILPTRISENFLLDPKVLESKL------TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 79 -~~g~~v~~i~~~~~~~~~~d~~~l~~~l------~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
..|.+++.++++.++++++|++.+++++ ..+++++++++||||||.+++.+++++|+++|+++ |++||+||+
T Consensus 162 ~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~-~i~lI~DEi 240 (496)
T PLN02376 162 WRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK-NIHLVVDEI 240 (496)
T ss_pred hhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEcC
Confidence 6899999999976567789999987653 23788999999999999999999999999999999 999999999
Q ss_pred ccccccCCCCccccccCCC-------CCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHH
Q 018665 152 YEHIIYAPATHTSFASLPG-------MWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKA 223 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
|+.+.|.+....++..+.. +.++++++.|+||.+|++|+|+||++++ +.+.+.+...... ...+++.|.+
T Consensus 241 Y~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~--~~vs~~~Q~a 318 (496)
T PLN02376 241 YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSF--GLVSSQTQLM 318 (496)
T ss_pred ccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHH
Confidence 9998887655556554421 1235677999999999999999999985 5555555544433 2478899999
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
+..+++++...+.++++.++.++++++.+.+.|++. |+.+..+.+|+|+|++++...... . +.+...++++.+.+
T Consensus 319 ~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~~~~~~~-~---~~~~e~~l~~~ll~ 393 (496)
T PLN02376 319 LASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLRHLLRDR-N---SFESEIELWHIIID 393 (496)
T ss_pred HHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEchhhhccC-C---chhHHHHHHHHHHH
Confidence 999998633223456677888999999999999987 888888999999999997532100 0 00123678888888
Q ss_pred ccCEEeccCCCCCC--CCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 304 KAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 304 ~~gi~i~~g~~~~~--~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.||.+.||+.|+. ++++||+++. +++++++++++|++++.+.+
T Consensus 394 ~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 394 KVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred cCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 78999999998863 6899999996 88999999999999997544
No 35
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=2.8e-46 Score=336.80 Aligned_cols=313 Identities=25% Similarity=0.457 Sum_probs=274.4
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCC---CEEEecCCCCCChHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPG---DEVIIPAPFWVSYPEM 76 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~---~~vl~~~~~~~~~~~~ 76 (352)
..|.++.|..++| ++++++++ ++|++++++ +|++|+|+++++..++.+++++| |.|+++.|+|..+...
T Consensus 30 ~~Y~~~~G~~~lr------~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~ 103 (350)
T TIGR03537 30 SQYPSALGTKALR------EAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERG 103 (350)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHH
Confidence 4588889999999 99999999 779988887 99999999999999999998876 6999999999999999
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
++..|.+++.++++.+.++.+|+++++++++++++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|..+.
T Consensus 104 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~ 182 (350)
T TIGR03537 104 ALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREH-GIILCSDECYTEIY 182 (350)
T ss_pred HHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHc-CcEEEEeccccccc
Confidence 99999999999997666778999999999988999999999999999999999999999999999 99999999999876
Q ss_pred cCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChH
Q 018665 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
+.+ ...++... +.++++++.|+||.+|++|+|+||+++++++++.+......++.+.+.+.+.++.+++.. ..
T Consensus 183 ~~~-~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~ 255 (350)
T TIGR03537 183 FGE-PPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSD----DN 255 (350)
T ss_pred cCC-CCCchhhc--CcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCC----cH
Confidence 543 23333333 247899999999999989999999999999999998877666666777788888777764 57
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
+.++.+..++++++.+.+.|++. |+++..+.+|+++|+++|+.. ++.++++.|.++ ||.+.||..|+
T Consensus 256 ~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~~~-----------~~~~l~~~L~~~-gv~v~~g~~f~ 322 (350)
T TIGR03537 256 HVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPSGI-----------DAKDYALRLLEN-GIVVAPGENFG 322 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCCCC-----------CHHHHHHHHHHC-CEEEcCchhhC
Confidence 78888999999999999999987 888888889999999998642 678999999875 99999999886
Q ss_pred C--CCeEEEEeecCHHHHHHHHHHHHH
Q 018665 317 D--DTCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 317 ~--~~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
. ++++||+++.+++++++++++|++
T Consensus 323 ~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 323 SGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred CCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 4 579999998788999999999875
No 36
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2e-46 Score=345.75 Aligned_cols=321 Identities=24% Similarity=0.420 Sum_probs=291.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|+++.|..++| +.+++++. ..|+.+.+++|++|+|+++|++.+.+.++++||.|++++|+|.+...+++..
T Consensus 126 ~~y~~~~G~~~LR------~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~ 199 (459)
T COG1167 126 LQYGPTAGLPELR------EAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEAL 199 (459)
T ss_pred hcCCCCCCcHHHH------HHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHc
Confidence 4688889999999 99999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
|.++..||++++ ++|+|.|++.++. ++++++++.. |||||.++|.++.++|+++|++| |++||+||.|+++.++
T Consensus 200 g~~~~~vp~d~~---G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~-~~~IIEDD~y~el~~~ 275 (459)
T COG1167 200 GARVIPVPVDED---GIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKY-DVLIIEDDYYGELRYD 275 (459)
T ss_pred CCcEEecCCCCC---CCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHc-CCeEEeeCcchhhhcC
Confidence 999999999743 3899999999975 6787776443 89999999999999999999999 9999999999999998
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
+...+++..+.. .+++++++||||.+. ||+|+||+++++++++.+.........+++.+.|.+++..+..+.. .+++
T Consensus 276 ~~p~~~l~~ld~-~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~-~~hl 352 (459)
T COG1167 276 GPPPPPLKALDA-PGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHY-DRHL 352 (459)
T ss_pred CCCCCChHhhCC-CCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCH-HHHH
Confidence 877777777765 689999999999997 9999999999999999999988888899999999999999996554 7889
Q ss_pred HHHHHHHHHHHHHHHHHhccc-C-CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc-CCCC
Q 018665 239 SKMVKAFRERRDFLVKSFGEL-E-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP-GDAF 315 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~-~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~-g~~~ 315 (352)
++++..++++++.+.+.|+++ + ++++..|.+|+|+|+++|+.. +..++.+.+.++ |+.+.| |..|
T Consensus 353 ~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~-----------~~~~l~~~a~~~-gv~i~~~g~~f 420 (459)
T COG1167 353 RRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI-----------DARELLAAALEK-GVVVTPLGSAF 420 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC-----------CHHHHHHHHHHC-CCEEEcCCccc
Confidence 999999999999999999987 3 688889999999999999875 788999888876 888888 8777
Q ss_pred CCC----CeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 316 GDD----TCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 316 ~~~----~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
... +++|++++. ++++++++++.|.+++++..
T Consensus 421 ~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 421 SADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred cCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 643 489999999 88999999999999998754
No 37
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=9.1e-46 Score=337.59 Aligned_cols=320 Identities=36% Similarity=0.627 Sum_probs=279.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..|..++| +.+|++++ ++|+.++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 60 ~Y~~~~g~~~lr------~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~ 133 (387)
T PRK07683 60 SYTHNAGLLELR------KAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLC 133 (387)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHc
Confidence 588889999999 99999999 779888888 9999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++. +++.+|.+++++.++++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|+.+.+.+.
T Consensus 134 g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~ 211 (387)
T PRK07683 134 GAKPVFIDTRS-TGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDK-NIFVLSDEIYSELVYEQP 211 (387)
T ss_pred CCEEEEeecCc-ccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEecccccceeCCC
Confidence 99999999874 5677899999999988899999999999999999999999999999999 999999999999877543
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
..++.......+++++++|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..+++. ...+.++
T Consensus 212 -~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~ 287 (387)
T PRK07683 212 -HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTA---GKDDAKM 287 (387)
T ss_pred -cCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhC---ChHHHHH
Confidence 345555533457899999999999999999999999999999988765444456788899999999976 2456788
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
.++.++++++.+.+.|++. ++.+..+++|+++|+.++... .+..+++..+++++||.+.||..|+. +
T Consensus 288 ~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 356 (387)
T PRK07683 288 MRHQYKKRRDYVYNRLISM-GLDVEKPTGAFYLFPSIGHFT----------MSSFDFALDLVEEAGLAVVPGSAFSEYGE 356 (387)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCcccCCCeeEEEEEecccCC----------CCHHHHHHHHHHhCCEEEcCchhhCCCCC
Confidence 8889999999999999987 888888999999999887521 15677887877777999999998864 4
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+++||+++.+++++++++++|.+++++
T Consensus 357 ~~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 357 GYVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 799999999889999999999998864
No 38
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=3e-46 Score=340.86 Aligned_cols=319 Identities=27% Similarity=0.474 Sum_probs=281.4
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|.+..|.+++| +.+++++. .++...+++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++.
T Consensus 61 ~~Y~~~~G~~~lr------~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~ 134 (386)
T PRK09082 61 NQYPPMTGVAALR------EAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIEL 134 (386)
T ss_pred CCCCCCCCcHHHH------HHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHH
Confidence 3588889999999 99999999 678777665 899999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++. .++.+|++++++.++++++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|.++.+++
T Consensus 135 ~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~-~i~li~De~y~~~~~~~ 212 (386)
T PRK09082 135 AGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGT-DIYVLSDEVYEHIVFDG 212 (386)
T ss_pred cCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CEEEEEehhhhhhccCC
Confidence 999999999964 3578999999999988899999999999999999999999999999999 99999999999988876
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++..+....+++++++|+||.+|++|+|+||+++++++++.+........++++.+.|.++..+++. .+.+.+
T Consensus 213 ~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~ 289 (386)
T PRK09082 213 AGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA---EPEHYL 289 (386)
T ss_pred CCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC---ChHHHH
Confidence 55566666655467999999999999999999999999999999998877666677999999999999874 267788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
++++.++++++.+.+.|++. ++.+..+.+|+++|+++|+..+ .+..++++.|++++||.+.||+.|+.
T Consensus 290 ~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~v~v~pg~~f~~~~ 359 (386)
T PRK09082 290 ELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDYSAISD---------LDDVEFCQWLTREHGVAAIPLSVFYADP 359 (386)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEeccccCC---------CCHHHHHHHHHHhCCEEEeCcHHhCCCC
Confidence 88999999999999999986 8888888999999999874200 16889999987778999999987742
Q ss_pred --CCeEEEEeecCHHHHHHHHHHHHH
Q 018665 318 --DTCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 318 --~~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
.+++||+++.+++++++++++|++
T Consensus 360 ~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 360 FPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred CCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 468999999988999999999875
No 39
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.4e-46 Score=348.58 Aligned_cols=337 Identities=22% Similarity=0.358 Sum_probs=275.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|+++.|.+++| +++|+++. ++|+++++++|++|+|+++++..++.+++ ++||.|+++.|+|..+...++..
T Consensus 110 ~Y~~~~G~~~LR------~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~ 183 (481)
T PTZ00377 110 AYTDSAGYPFVR------KAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLL 183 (481)
T ss_pred CcCcccCCHHHH------HHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHc
Confidence 489999999999 99999999 88999999999999999999999999998 79999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
|.+++.++++++++|.+|+++|++.+++ +++++++++||||||.+++.+++++|+++|+++ |++||+||+|.+
T Consensus 184 g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~-~~~iI~De~Y~~ 262 (481)
T PTZ00377 184 GGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEK-GIVLMADEVYQE 262 (481)
T ss_pred CCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEehhhHh
Confidence 9999999998777888999999999864 789999999999999999999999999999999 999999999999
Q ss_pred cccCC-CCcccccc----CCCC---CCceEEEeccccc-cccccceeEEEEc---ChhHHHHHHhhhhccccCCChHHHH
Q 018665 155 IIYAP-ATHTSFAS----LPGM---WERTLTVNGFSKA-FAMTGWRLGYIAG---PKHFVAACNKIQSQFTSGASSISQK 222 (352)
Q Consensus 155 ~~~~~-~~~~~~~~----~~~~---~~~~i~~~s~sK~-~g~~g~~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (352)
+.|++ ....++.. +... ..+++++.|+||. ++++|+|+||+++ ++++++.+.+... ...+++.+.|.
T Consensus 263 l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~-~~~~~~~~~Q~ 341 (481)
T PTZ00377 263 NIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLAS-INLCSNVVGQL 341 (481)
T ss_pred hccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhh-eecCCChHHHH
Confidence 88853 23334332 2221 1368999999997 5889999999986 8899999888664 33468999999
Q ss_pred HHHHHhcccCCC----hHH---HHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecC--CccCCcccCCCCCCC
Q 018665 223 AGVAALGLGYAG----GEV---VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS--TYYGSEAEGFGKIEN 293 (352)
Q Consensus 223 ~~~~~l~~~~~~----~~~---~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~ 293 (352)
++..+++..... ..+ +.++.+.++++++.+.+.|++++|+.+..|++|+|+|++++ ........+. +..+
T Consensus 342 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~-~~~~ 420 (481)
T PTZ00377 342 MTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKER-GLAP 420 (481)
T ss_pred HHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhc-CCCc
Confidence 999999642111 123 33444567899999999999988999999999999997653 2110000000 0012
Q ss_pred hHHHHHHHHHccCEEeccCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 294 SESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 294 ~~~~~~~l~~~~gi~i~~g~~~~~---~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
...++..++++.||.+.||+.|+. .+++||+++.+++++++++++|+++++++..
T Consensus 421 ~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 421 DVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred HHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 445666777777999999999973 3599999998888999999999999987643
No 40
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=7.8e-46 Score=338.53 Aligned_cols=322 Identities=32% Similarity=0.559 Sum_probs=280.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|+++.|..++| +.+++++. ++|++..++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++.
T Consensus 55 ~~Y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~ 128 (387)
T PRK07777 55 NQYPPGPGIPELR------AAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAM 128 (387)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHH
Confidence 4588889999999 99999998 788887776 799999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCC-CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 80 ADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 80 ~g~~v~~i~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
.|.+++.++++++ .++.+|++++++.++++++++++++||||||.+++.+++++|+++|+++ ++++|+||+|+++.+.
T Consensus 129 ~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~y~~~~~~ 207 (387)
T PRK07777 129 AGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEH-DLLVITDEVYEHLVFD 207 (387)
T ss_pred CCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhc-CcEEEEeccchhcccC
Confidence 9999999998765 3677999999999988899999999999999999999999999999999 9999999999998876
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
+..+.++..++...++++++.|+||.+|++|+|+||+++++++++.+...........+.+.|.++..++.. ...++
T Consensus 208 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~ 284 (387)
T PRK07777 208 GARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDH---EDAWV 284 (387)
T ss_pred CCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC---CcHHH
Confidence 654445555443357899999999999999999999999999999888776655666788888888888875 25778
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC-
Q 018665 239 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD- 317 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~- 317 (352)
+++++.++++++.+.+.|++. ++++..+++++++|++++... ..++.++++.|++++||.+.||..|+.
T Consensus 285 ~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~l~~~~gv~v~pg~~f~~~ 354 (387)
T PRK07777 285 AALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADPRPLG---------YDDGTEFCRALPERVGVAAIPMSVFYDP 354 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEecccccC---------CCCHHHHHHHHHHhCCEEEeCchHhCCC
Confidence 888999999999999999987 888888899999999876311 016789999998777999999987753
Q ss_pred ----CCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 318 ----DTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 318 ----~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
++++||+++.+++++++++++|+++.
T Consensus 355 ~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 355 ADAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred CcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 35899999998999999999998865
No 41
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.1e-45 Score=337.48 Aligned_cols=323 Identities=34% Similarity=0.601 Sum_probs=277.7
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|.+..|.+++| ++++++++ ++++.+.+ ++|++|+|+++++..++.+++++||+|++++|+|..+...++.
T Consensus 61 ~~Y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~ 134 (391)
T PRK07309 61 SHYTGMAGLLELR------QAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNL 134 (391)
T ss_pred CCCCCCCCcHHHH------HHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHH
Confidence 4688899999999 99999999 78887764 7999999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
.|.+++.++.+. .++.+|++.++++++. +++++++++|+||||.+++.+++++|+++|+++ |+++|+|++|+++.
T Consensus 135 ~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~-~~~ii~D~~y~~~~ 212 (391)
T PRK07309 135 VGAEIVEIDTTE-NDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKY-DIFVISDEVYSELT 212 (391)
T ss_pred cCCEEEEEecCC-cCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEEcccccee
Confidence 999999999863 4567899999998863 688999999999999999999999999999999 99999999999988
Q ss_pred cCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChH
Q 018665 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
+++....++.... .+++++++|+||.+|++|+|+||+++++++++.+.........+++.+.|.++..+++++ ..
T Consensus 213 ~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~ 287 (391)
T PRK07309 213 YTGEPHVSIAEYL--PDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNG---KD 287 (391)
T ss_pred eCCCCCCCHHHhc--cCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCC---hh
Confidence 8654444544432 478999999999999999999999999999999887654444578899999999999762 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
+....++.++++++.+.+.|++. ++.+..+.+|+++|+++|+... .++.++++.++++.||.+.||..|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l~~~~~---------~~~~~~~~~l~~~~gv~v~pg~~f~ 357 (391)
T PRK07309 288 DALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKIPAGYN---------QDSFKFLQDFARKKAVAFIPGAAFG 357 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEECCCCCC---------CCHHHHHHHHHHhCCEEEeCchhhC
Confidence 45567788889999999999987 8888889999999999876421 1467788887766799999999876
Q ss_pred C--CCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 317 D--DTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 317 ~--~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
. ++++||+++.+.+++++++++|++++++..
T Consensus 358 ~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 358 PYGEGYVRLSYAASMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred CCCCCEEEEEecCCHHHHHHHHHHHHHHHHhhc
Confidence 5 579999999888999999999999997653
No 42
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=5e-46 Score=350.22 Aligned_cols=328 Identities=25% Similarity=0.415 Sum_probs=271.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..|..++| +++|+++. +.+..+++++|++|+|+++++..++.+++++||+|+++.|+|..|...++..|
T Consensus 180 ~Y~~~~G~~~lR------eaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g 253 (517)
T PRK13355 180 GYSDSKGLFSAR------KAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAG 253 (517)
T ss_pred CCCCCcChHHHH------HHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCC
Confidence 588999999999 99999999 55546889999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++++++|.+|+++++++++++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.+++..
T Consensus 254 ~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~-~~~ii~DE~Y~~~~~~~~~ 332 (517)
T PRK13355 254 GTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREH-QLIIFSDEIYDRLVMDGLE 332 (517)
T ss_pred CEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEehhhhhhcCCCCC
Confidence 999999998777899999999999988999999999999999999999999999999999 9999999999999887755
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEc--ChhH----HHHHHhhhhccccCCChHHHHHHHHHhcccCCCh
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKHF----VAACNKIQSQFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
+.++..+.. ...++++.||||.++++|+|+||+++ ++++ ++.+... .....+.+.+.|.++..++.......
T Consensus 333 ~~s~~~~~~-~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~ 410 (517)
T PRK13355 333 HTSIASLAP-DLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVK 410 (517)
T ss_pred cccHHHhCC-CCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHH
Confidence 566665532 23467789999999999999999995 3443 3334322 22335688899999999996421113
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
+++.+.. ++.++++.+.+.|++++|+++..|+++||+|++++...- ...+..+++..++++.||.+.||+.|
T Consensus 411 ~~~~~~~-~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~-------~~~~~~~~~~~ll~~~gV~v~pg~~F 482 (517)
T PRK13355 411 DYLVPGG-RVYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDVKKF-------NIHDDEQFALDLLHDKKVLIVQGTGF 482 (517)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCcccC-------CCCCHHHHHHHHHHhCCEEEeCcchh
Confidence 4555543 344567899999999889999999999999998864210 00145567777676779999999988
Q ss_pred C--CCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 316 G--DDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 316 ~--~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
+ .++++||+++.+++++++++++|+++++.++
T Consensus 483 ~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 483 NWDKPDHFRVVYLPRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred CCCCcCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 6 4689999998899999999999999997653
No 43
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-47 Score=324.91 Aligned_cols=332 Identities=39% Similarity=0.667 Sum_probs=292.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
+-|+...|.++++ +.+++.++ .+|....+ ++|++|.|+.+++..++..++++||+|++..|.|..|....+.
T Consensus 63 ~qYt~~~G~p~L~------~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~m 136 (420)
T KOG0257|consen 63 NQYTRGYGLPQLR------KALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVM 136 (420)
T ss_pred ccccccCCchHHH------HHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhh
Confidence 3588999999999 99999999 56666655 6799999999999999999999999999999999999999999
Q ss_pred cCCeEEEeccc------CCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 80 ADATPVILPTR------ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 80 ~g~~v~~i~~~------~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
.|..++.++.. ...+|.+|+++++.++.+++++|++++||||||.+++.+++++|+++|++| |+++|.||+|.
T Consensus 137 aG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~-~~lvisDevYe 215 (420)
T KOG0257|consen 137 AGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH-GLLVISDEVYE 215 (420)
T ss_pred cCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CEEEEEhhHhH
Confidence 99999999998 456788999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCC
Q 018665 154 HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
.+.+++..+..+..+++.+++.+-++|++|++|+.|+|+||+++++.++..+...+....+..+++.|.|.++++..+..
T Consensus 216 ~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~ 295 (420)
T KOG0257|consen 216 WLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELA 295 (420)
T ss_pred HHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhh
Confidence 99999998899999999999999999999999999999999999999999999998888899999999999999987542
Q ss_pred C-----hHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccC-CcccCCCCCCChHHHHHHHHHccCE
Q 018665 234 G-----GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 234 ~-----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
+ ..+..++.+.++++|+.+.+.|+++ |++++.|++++|+|.+++.... .-.++....-+.-.+..++.++.|+
T Consensus 296 ~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv 374 (420)
T KOG0257|consen 296 CLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGV 374 (420)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcE
Confidence 1 1455668999999999999999999 9999999999999999982110 1111111111455788999999999
Q ss_pred EeccCCCCCCCC-------eEEEEeecCHHHHHHHHHHHHH
Q 018665 308 ALVPGDAFGDDT-------CIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 308 ~i~~g~~~~~~~-------~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
.+.|++.|+.++ .+|+++..+++.++++.++|++
T Consensus 375 ~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 375 VVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred EEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 999999998754 5777777788999999999883
No 44
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1e-45 Score=337.59 Aligned_cols=319 Identities=24% Similarity=0.430 Sum_probs=277.7
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|+++.|.+++| +.++++++ .+|..+.+++|++|+|+++++..++.+++++||+|+++.|+|..+...++..
T Consensus 61 ~~Y~~~~G~~~lr------~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~ 134 (386)
T PRK07550 61 HLYGPVEGLPELR------EAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDML 134 (386)
T ss_pred cCCCCCCCCHHHH------HHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc
Confidence 3588899999999 99999999 8898889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++++.++.+|++++++.++++++++++++||||||.++|.+++++|+++|+++ |+++|+||+|+++.+.+.
T Consensus 135 g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~-~~~iI~Dd~y~~~~~~~~ 213 (386)
T PRK07550 135 GIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRH-GIALILDETYRDFDSGGG 213 (386)
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CeEEEEeccchhhccCCC
Confidence 9999999997656777899999999988899999999999999999999999999999999 999999999998765433
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...++.......++++++.|+||.+|++|+|+||+++++++++.+.......+.+++.+.|.++..+++. .+++.++
T Consensus 214 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~ 290 (386)
T PRK07550 214 APHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWRAG 290 (386)
T ss_pred CCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHHHH
Confidence 2233332222246889999999999999999999999999999988877766777899999999999875 3678888
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCC-ccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST-YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
.++.++++++.+.+.|++++++.+ .+.+|+++|++++. .. ++.++++.|++++||.+.||..|+.
T Consensus 291 ~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~~~~-----------~~~~l~~~l~~~~gv~v~pg~~f~~~~ 358 (386)
T PRK07550 291 NRAEIARRRDAFRAVFARLPGWEL-LASGAYFAYVRHPFPDR-----------PSREVARRLAKEAGILCLPGTMFGPGQ 358 (386)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcee-CCCceEEEEecCCCCCC-----------CHHHHHHHHHHhcCEEEeCchhhCCCC
Confidence 889999999999999988756654 46788999999875 32 7889999988777999999988863
Q ss_pred CCeEEEEeec-CHHHHHHHHHHHHHH
Q 018665 318 DTCIRISYAA-SLTTLQAAVERIKKG 342 (352)
Q Consensus 318 ~~~iRi~~~~-~~~~l~~~~~~l~~~ 342 (352)
++++||+++. +++++++++++|+++
T Consensus 359 ~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 359 EGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred CCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 5799999997 789999999999875
No 45
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1e-45 Score=337.89 Aligned_cols=322 Identities=33% Similarity=0.546 Sum_probs=277.3
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|++..|.+++| +++|++++ ++|+.+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 61 ~~Y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~ 134 (388)
T PRK07337 61 TQYTSALGLAPLR------EAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAA 134 (388)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc
Confidence 3588888999999 99999999 7898889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.+.++.+|++++++.++++++++++++||||||.+++.+++++|+++|+++ ++++|+||+|.++.+.+.
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~ 213 (388)
T PRK07337 135 EGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRAR-GGFTIVDEIYQGLSYDAA 213 (388)
T ss_pred CCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHC-CCEEEEeccccccccCCC
Confidence 9999999997666778999999999988999999999999999999999999999999999 999999999998877553
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
..+.... .++++++.|+||.+|++|+|+||+++++++++.+.........+.+.+.|.++..++..+. ..+..+
T Consensus 214 -~~~~~~~---~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~--~~~~~~ 287 (388)
T PRK07337 214 -PVSALSL---GDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDT--LAIYER 287 (388)
T ss_pred -CcChhhc---cCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCc--hHHHHH
Confidence 2233222 4678999999999999999999999999999999887766666789999999999987532 245677
Q ss_pred HHHHHHHHHHHHHHHhcccCCcee-cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
.++.++++++.+.+.|++. ++.+ ..|++|+|+|++++.... .. ..++.++++++++++||.+.||..|+.
T Consensus 288 ~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~--~~----~~~~~~~~~~ll~~~gv~v~pg~~f~~~~ 360 (388)
T PRK07337 288 RRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVAH--PA----AGDSAALTQAMLHDAGVVLVPGRDFGPHA 360 (388)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEecccccC--CC----CCCHHHHHHHHHHhCCEEEeCchhhCCCC
Confidence 8889999999999999987 7665 468899999999975210 00 016778888877777999999998864
Q ss_pred -CCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 318 -DTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 318 -~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
++++||+++.+++++++++++|.+++
T Consensus 361 ~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 361 PRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred CCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 47999999998899999999998865
No 46
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=9e-46 Score=338.63 Aligned_cols=315 Identities=25% Similarity=0.444 Sum_probs=271.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCE--EEecCCCCCChHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLS--YTPD-QILVSNGAKQSILQAVLAVCSPGDE--VIIPAPFWVSYPE 75 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~--~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~--vl~~~~~~~~~~~ 75 (352)
..|+++.|.+++| +++|+++. +++++ ++++ +|++|+|+++++..++.+++++||+ |+++.|+|..+..
T Consensus 58 ~~Y~~~~G~~~lr------~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~ 131 (393)
T TIGR03538 58 STYPTTKGLPELR------QAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG 131 (393)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH
Confidence 4688899999999 99999998 76776 5774 8999999999999999999999986 9999999999999
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
.++..|.+++.+++++++++.+|++++++++.++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++
T Consensus 132 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~ 210 (393)
T TIGR03538 132 AALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQY-GFIIASDECYSEL 210 (393)
T ss_pred HHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CEEEEECcchhhc
Confidence 999999999999997666788999999998877899999999999999999999999999999999 9999999999988
Q ss_pred ccCCC-Cccccc----cCC-CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhc
Q 018665 156 IYAPA-THTSFA----SLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALG 229 (352)
Q Consensus 156 ~~~~~-~~~~~~----~~~-~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 229 (352)
.+.+. ...++. ... ..+++++++.|+||.++++|+|+||+++++++++.+.........+++.+.|.++.+.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 290 (393)
T TIGR03538 211 YFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWN 290 (393)
T ss_pred ccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhc
Confidence 77542 222211 111 135789999999999989999999999999999998877665566788899998888886
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
. .+++++.++.++++++.+.+.|++. +.+..|++|+|+|+++| . +..++++.|++++||.+
T Consensus 291 ~----~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~gg~f~~~~~~-~------------~~~~~~~~l~~~~gV~v 351 (393)
T TIGR03538 291 D----EQHVRENRALYREKFAAVLEILGQV--LDLELPDAGFYLWPKVP-G------------DDEAFARALYEEENVTV 351 (393)
T ss_pred C----hHHHHHHHHHHHHHHHHHHHHHHhh--CcccCCCeeEEEEEECC-C------------CHHHHHHHHHHHCCEEE
Confidence 4 5778889999999999999999864 45567899999999998 2 66788888877679999
Q ss_pred ccCCCCCC--------CCeEEEEeecCHHHHHHHHHHHHHH
Q 018665 310 VPGDAFGD--------DTCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 310 ~~g~~~~~--------~~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
.||+.|+. .+++||+++.+++++++++++|+++
T Consensus 352 ~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 352 LPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF 392 (393)
T ss_pred eCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 99998742 4699999998889999999999875
No 47
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.5e-45 Score=337.93 Aligned_cols=327 Identities=24% Similarity=0.410 Sum_probs=279.6
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|++..|..++| +.++++++ +.++.+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..
T Consensus 67 ~~Y~~~~g~~~lr------~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~ 140 (403)
T TIGR01265 67 NGYAPSVGALAAR------EAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFS 140 (403)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc
Confidence 3588899999999 99999999 7788888999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.+.++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++ |+++|+|++|+++.+++.
T Consensus 141 g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~ 219 (403)
T TIGR01265 141 GLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKL-GIPIIADEIYGHMVFGDA 219 (403)
T ss_pred CCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEccccccccCCC
Confidence 9999999986656778999999999988899999999999999999999999999999999 999999999999887765
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcC-h-h-----HHHHHHhhhhccccCCChHHHHHHHHHhcccCC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-K-H-----FVAACNKIQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
...++..+.. ..++++++|+||.++++|+|+||++++ + + +++.+..... ...+++.+.|.++..+++..
T Consensus 220 ~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~-- 295 (403)
T TIGR01265 220 PFIPMASFAS-IVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENT-- 295 (403)
T ss_pred Cccchhhhcc-CCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhC--
Confidence 4455555543 357999999999998899999999974 2 2 3344444322 23568999999999999752
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
...++++.++.++++++.+.+.|+.++++.+..|.+|+|+|++++.... . +..+..++++.++++.||.+.||.
T Consensus 296 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~---~---~~~~~~~~~~~l~~~~gv~v~pg~ 369 (403)
T TIGR01265 296 PQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELF---P---EIKDDVDFCEKLVREESVICLPGS 369 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEecccccc---C---CCCCHHHHHHHHHHhCCEEEeCcc
Confidence 2578899999999999999999998878887789999999999875310 0 001567888887777799999999
Q ss_pred CCCCCCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 314 AFGDDTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 314 ~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
.|+.++++||+++.+++++++++++|++++.+
T Consensus 370 ~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 370 AFGLPNWVRITITVPESMLEEACSRIKEFCER 401 (403)
T ss_pred ccCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 99888999999999889999999999998865
No 48
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-45 Score=335.98 Aligned_cols=323 Identities=31% Similarity=0.569 Sum_probs=280.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|++..|..++| +.+++++.++++.+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.
T Consensus 61 ~Y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~ 134 (397)
T PRK07568 61 AYSHSQGIPELR------EAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGV 134 (397)
T ss_pred CcCCCCCCHHHH------HHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCC
Confidence 588889999999 99999999778888899999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCccc-CHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 83 TPVILPTRISENFLL-DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~-d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+++.++++.+.++.. ++++++++++++++++++++|+||||.+++.+++++|+++|+++ |+++|+|++|.++.+++..
T Consensus 135 ~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~ 213 (397)
T PRK07568 135 KIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKH-DLFLISDEVYREFVYDGLK 213 (397)
T ss_pred EEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHC-CcEEEEeccchhcccCCCC
Confidence 999999864445443 67999999988899999999999999999999999999999999 9999999999998877654
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
..++..+...+++++++.|+||.+|++|+|+||++++ +++++.+...... .++++.+.|.++..+++. .+.++++
T Consensus 214 ~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~---~~~~~~~ 289 (397)
T PRK07568 214 YTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDT---PESYFDE 289 (397)
T ss_pred ccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhC---CHHHHHH
Confidence 5566665544678999999999999899999999984 6788877654432 457899999999999975 3678889
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc-----cCEEeccCCCC
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-----AQVALVPGDAF 315 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~i~~g~~~ 315 (352)
+++.++++++.+.+.|++++++.+..|.+|+++|++++.. +..++.++|.++ .||.+.||..|
T Consensus 290 ~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~------------~~~~~~~~l~~~~~~~~~gv~v~pg~~f 357 (397)
T PRK07568 290 VREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVD------------DAEDFAKWLLTDFNYNGETVMVAPASGF 357 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCCC------------CHHHHHHHHHhhcccccceEEEeCchHh
Confidence 9999999999999999988788888889999999999853 677888888763 58999999877
Q ss_pred CC-----CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 316 GD-----DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 316 ~~-----~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+. ++++||+++.+++++++++++|+++++++..
T Consensus 358 ~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~~~~ 395 (397)
T PRK07568 358 YATPGLGKNEIRIAYVLNEEDLKRAMEILKEALEKYNK 395 (397)
T ss_pred cCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHhhc
Confidence 31 3699999988889999999999999987654
No 49
>PLN02231 alanine transaminase
Probab=100.00 E-value=9.9e-46 Score=345.64 Aligned_cols=336 Identities=21% Similarity=0.324 Sum_probs=274.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC-CCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|+++.|.+++| +.+|+++. ++|+++++++|++|+|+++++..++.+++. +||.|+++.|+|..|...++..
T Consensus 163 ~Y~~s~G~~~lR------eaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~ 236 (534)
T PLN02231 163 AYSHSQGIKGLR------DAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALH 236 (534)
T ss_pred CcCCCCCcHHHH------HHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHc
Confidence 499999999999 99999999 789999999999999999999999999984 7999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
|.+++.++++++++|.+|+++|++++++ +++++++++||||||.+++.+++++|+++|+++ |++||+||+|.+
T Consensus 237 g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~-~l~lI~DEvY~~ 315 (534)
T PLN02231 237 GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQE-GLVLLADEVYQE 315 (534)
T ss_pred CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEccchh
Confidence 9999999998777789999999998864 688999999999999999999999999999999 999999999999
Q ss_pred cccC-CCCccccccCCC------CCCceEEEecccccc-ccccceeEEEEc---ChhHHHHHHhhhhccccCCChHHHHH
Q 018665 155 IIYA-PATHTSFASLPG------MWERTLTVNGFSKAF-AMTGWRLGYIAG---PKHFVAACNKIQSQFTSGASSISQKA 223 (352)
Q Consensus 155 ~~~~-~~~~~~~~~~~~------~~~~~i~~~s~sK~~-g~~g~~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
+.|+ +....++..+.. ...++++++|+||.+ |++|+|+||+++ ++++++.+.+... ...+++.+.|.+
T Consensus 316 l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~ 394 (534)
T PLN02231 316 NVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQIL 394 (534)
T ss_pred cccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHH
Confidence 9885 334445544321 123689999999976 889999999986 6888888877654 345677888888
Q ss_pred HHHHhcccCC----ChH---HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeec--CCccCCcccCCCCCCCh
Q 018665 224 GVAALGLGYA----GGE---VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF--STYYGSEAEGFGKIENS 294 (352)
Q Consensus 224 ~~~~l~~~~~----~~~---~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~ 294 (352)
+..+++.... .+. +.+.+++.++++++.+.+.|++++|+.+..|++|+|+|.++ |...-...+.. +....
T Consensus 395 ~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~-~~~~d 473 (534)
T PLN02231 395 ASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAA-KTAPD 473 (534)
T ss_pred HHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhc-CCCcH
Confidence 8888864210 022 23456788999999999999998899999999999999554 43100000000 00123
Q ss_pred HHHHHHHHHccCEEeccCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 295 ESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~~~~---~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
..++.+|+++.||.+.||+.|+. ..++|+++..+++++++++++|+++++++.
T Consensus 474 ~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~ 529 (534)
T PLN02231 474 AFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFM 529 (534)
T ss_pred HHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 45677788778999999999974 236999998899999999999999887653
No 50
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.6e-45 Score=338.38 Aligned_cols=313 Identities=27% Similarity=0.391 Sum_probs=263.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|+++.|.+++| +++|+++. ++|+++++++|++|+|+++++..+. .++++||+|++++|+|..+...++..|
T Consensus 71 ~Y~~~~G~~~LR------~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g 143 (409)
T PRK07590 71 GYGPEQGYDFLR------EKIAENDYQARGCDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAG 143 (409)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcC
Confidence 588999999999 99999988 8889999999999999999999764 556899999999999999999999999
Q ss_pred Ce-----------EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 82 AT-----------PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 82 ~~-----------v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
.+ ++.++++.++++..|.++ ++++++++++||||||.+++.+++++|+++|+++ |++||+||
T Consensus 144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De 216 (409)
T PRK07590 144 RTGEANEDGRYSGIVYLPCTAENNFVPELPE------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN-GSLILFDA 216 (409)
T ss_pred CcccccccccccceeEeecccccCCcccCcc------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc-CeEEEEEc
Confidence 87 889998755555555332 5789999999999999999999999999999999 99999999
Q ss_pred cccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHH------------HhhhhccccCCCh
Q 018665 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC------------NKIQSQFTSGASS 218 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~------------~~~~~~~~~~~~~ 218 (352)
+|+++.+++....++..++...+++++++||||.+|++|+|+||+++++++++.+ .........+++.
T Consensus 217 ~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 296 (409)
T PRK07590 217 AYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSY 296 (409)
T ss_pred cchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCH
Confidence 9999887664445555554434678999999999999999999999999988732 1111111235788
Q ss_pred HHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHH
Q 018665 219 ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 219 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
+.|.++..++... ...++++.++.++++++.+.+.|++. ++.+..+.+|+|+|+++++.. ++.+++
T Consensus 297 ~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~~-----------~~~~~~ 362 (409)
T PRK07590 297 IVQRAAEAVYSPE--GKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDGM-----------SSWDFF 362 (409)
T ss_pred HHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCCC-----------CHHHHH
Confidence 9999998888742 25788889999999999999999987 788888889999999998642 677888
Q ss_pred HHHHHccCEEeccCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 299 RYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~~~--~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
+.+++++||.+.||+.|+. .+++||++..+++++++++++|++++
T Consensus 363 ~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 363 DKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIKKAL 409 (409)
T ss_pred HHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHHhhC
Confidence 8888777999999998864 46999998678899999999998753
No 51
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=5.5e-45 Score=334.02 Aligned_cols=324 Identities=30% Similarity=0.508 Sum_probs=274.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|+++.|..++| +.++++++ ++|+.+++++|++|+|+++++..++.+++++||.|++++|+|..+...++..
T Consensus 64 ~~Y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~ 137 (398)
T PRK08363 64 NYYGPSEGLPELR------EAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFY 137 (398)
T ss_pred CCCCCCCCcHHHH------HHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc
Confidence 3588899999999 99999999 7798899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|..++.++..+++++.+|++++++.++++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++.
T Consensus 138 g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~li~Deay~~~~~~~~ 216 (398)
T PRK08363 138 GGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEH-DLPVISDEIYDLMTYEGK 216 (398)
T ss_pred CCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CeEEEEhhhhhhhccCCc
Confidence 9998888432235667899999999988899999999999999999999999999999999 999999999998877553
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEc--ChhHHHHHHhhhh---ccccCCChHHHHHHHHHhcccCCCh
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKHFVAACNKIQS---QFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
..++..+.. ..+++++.||||.++++|+|+||+++ ++++++.+..... ....++|.+.|.++.+++.. ..
T Consensus 217 -~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~ 291 (398)
T PRK08363 217 -HVSPGSLTK-DVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG---PM 291 (398)
T ss_pred -ccCHHHcCc-CCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC---Ch
Confidence 234444443 46799999999999889999999997 6777766654322 12356899999999999975 36
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
+++++.++.++++++.+.+.|++++++.+..+.+|+++|+++++... .+..+++..++++.||.+.||+.|
T Consensus 292 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~---------~~~~~~~~~~l~~~gV~v~~g~~f 362 (398)
T PRK08363 292 DYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPW---------KDDKEFVLDVLHEAHVLFVHGSGF 362 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCC---------CCHHHHHHHHHHhCCEEEeCchhh
Confidence 88889999999999999999998878888888999999998875200 045566666655679999999988
Q ss_pred CC--CCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 316 GD--DTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 316 ~~--~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
+. ++++||+++.+++++++++++|++++++.
T Consensus 363 ~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 363 GEYGAGHFRLVFLPPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred CCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 64 47999999888899999999999988763
No 52
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-45 Score=309.98 Aligned_cols=322 Identities=27% Similarity=0.480 Sum_probs=287.8
Q ss_pred CCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCe
Q 018665 5 RVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
|-+.+..++. ++++.++. ++++.++++.|.+++|..-++..+++.|.++||.|++.+|.|+++....+..|.+
T Consensus 57 GY~~~~~~~~------~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~ 130 (388)
T COG1168 57 GYPYGSDELY------AAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRK 130 (388)
T ss_pred CCCCCCHHHH------HHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcE
Confidence 3345555666 99999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccC-CCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 84 PVILPTRI-SENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 84 v~~i~~~~-~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+...|+.+ ++.|.+|.++|++++.+ ++++.++||||||+|.+++.+++.+|.++|.+| |+++|.||.|+++.+.|+.
T Consensus 131 ~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh-~v~VISDEIHaDlv~~g~~ 209 (388)
T COG1168 131 VIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRH-GVRVISDEIHADLVLGGHK 209 (388)
T ss_pred EEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHc-CCEEEeecccccccccCCC
Confidence 99999984 45688899999999975 469999999999999999999999999999999 9999999999999999988
Q ss_pred ccccccCCCC-CCceEEEeccccccccccceeEEEEcCh-hHHHHH-HhhhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 162 HTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAAC-NKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 162 ~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
+.++..+... .++.+.+.|.||+|+++|+.+++++.+. ++.+++ +++......++|.++..|..++++. +..|+
T Consensus 210 h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~---G~~WL 286 (388)
T COG1168 210 HIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ---GEPWL 286 (388)
T ss_pred ccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh---chHHH
Confidence 8887776543 4788999999999999999999998755 443433 4445556678999999999999998 68999
Q ss_pred HHHHHHHHHHHHHHHHHhccc-CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 239 SKMVKAFRERRDFLVKSFGEL-EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
+++...++.+++++.+.+++. |++++..|++.+.+|+++.+.. .+..++.+.++++.+|.+.+|..|+.
T Consensus 287 d~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~----------l~d~~l~~~ll~~akVal~~G~~FG~ 356 (388)
T COG1168 287 DELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELG----------LDDSELAEFLLEEAKVALSPGSTFGE 356 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccC----------CChHHHHHHHHHhhcEeccCCCccCc
Confidence 999999999999999999975 9999999999999999998763 26679999999999999999999986
Q ss_pred --CCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 318 --DTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 318 --~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
.+++|++++++.+-+++++++|+.+++..
T Consensus 357 ~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 357 EGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 46999999999999999999999988754
No 53
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=4.5e-45 Score=334.11 Aligned_cols=324 Identities=26% Similarity=0.421 Sum_probs=279.3
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|+++.|.+++| ++++++++ ++|+.++++ +|++|+|+++++..++..++++||+|++++|+|..+...++.
T Consensus 61 ~~Y~~~~G~~~lr------~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~ 134 (395)
T PRK08175 61 HGYSTSRGIPRLR------RAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVI 134 (395)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHH
Confidence 3588899999999 99999999 779888886 899999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
.|.+++.++++++++ +.+.++++++ ++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|+++.
T Consensus 135 ~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~-~i~ii~De~y~~l~ 210 (395)
T PRK08175 135 AGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRY-DVLVVHDLAYADIV 210 (395)
T ss_pred cCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEecchHhhc
Confidence 999999999875443 4677777775 4788999999999999999999999999999999 99999999999988
Q ss_pred cCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChH
Q 018665 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
+++....++..++...++++++.|+||.+|++|+|+||+++++++++.+.+.......+++++.|.++..++.. ...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~ 287 (395)
T PRK08175 211 YDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG---DQQ 287 (395)
T ss_pred cCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC---cHH
Confidence 86655556555543346788999999999999999999999999999998877666677888889988888865 256
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
+++.++..++++++.+.+.|+++ ++.+..+++|+|+|+++++... ..++.++++.++++.||.+.||..|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~~--------~~~~~~~~~~l~~~~gv~v~p~~~f~ 358 (395)
T PRK08175 288 CVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPYA--------AMGSLEFAKKLLNEAKVCVSPGIGFG 358 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCcccC--------CCCHHHHHHHHHHhCCEEEeCchhhC
Confidence 78888999999999999999988 8888788899999999986421 01467888888877799999998875
Q ss_pred C--CCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 317 D--DTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 317 ~--~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
. ++++||+++.+++.+++++++|+++++++.
T Consensus 359 ~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~~ 391 (395)
T PRK08175 359 DYGDTHVRFALIENRDRIRQAIRGIKAMFRADG 391 (395)
T ss_pred cCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhcC
Confidence 4 469999998888999999999999998654
No 54
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=8.5e-45 Score=329.53 Aligned_cols=308 Identities=22% Similarity=0.335 Sum_probs=260.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~ 78 (352)
..|+++.|..++| +++|+++. ++|+++++++|++|+|+++++..++.+++ ++||.|+++.|+|..+...++
T Consensus 54 ~~Y~~~~G~~~lr------~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~ 127 (374)
T PRK05839 54 NKYPKSAGEESLR------EAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAI 127 (374)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHH
Confidence 5688889999999 99999999 77988999999999999999998888764 578999999999999999999
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
..|++++.++++.++++.+|+++.+ + ++++++++++||||||.+++.+++++|+++|+++ |++||+||+|.++.+.
T Consensus 128 ~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~-~~~ii~DE~Y~~~~~~ 203 (374)
T PRK05839 128 ASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKH-DFILINDECYSEIYEN 203 (374)
T ss_pred hcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHc-CCEEEeccchhhcccC
Confidence 9999999999976666777765432 2 4689999999999999999999999999999999 9999999999987543
Q ss_pred CCCccccccC-----CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCC
Q 018665 159 PATHTSFASL-----PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 159 ~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
+ ..+++... ...++++++++||||.+|++|+|+||+++++++++.+.........+.+.+.|.++..++..
T Consensus 204 ~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--- 279 (374)
T PRK05839 204 T-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD--- 279 (374)
T ss_pred C-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc---
Confidence 3 22333221 12357999999999999999999999999999999988776555567888889888888864
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
.+++++.++.++++++.+.+.|. +. .|++|+|+|++++ +..+++++|++++||.+.||.
T Consensus 280 -~~~~~~~~~~~~~~~~~~~~~l~----~~--~p~gg~fi~~~~~--------------~~~~~~~~l~~~~gi~v~pg~ 338 (374)
T PRK05839 280 -DEHAEFFRNIYAKNLKLAREILG----IT--IPPATFYVWLPVD--------------NDEEFTKKLYQNEGIKVLPGS 338 (374)
T ss_pred -chHHHHHHHHHHHHHHHHHHhcC----CC--CCCeeEEEEEeCC--------------ChHHHHHHHHHHCCEEEeCch
Confidence 67788889999999988888763 33 6789999999986 456888888876799999998
Q ss_pred CCCC----CCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 314 AFGD----DTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 314 ~~~~----~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
.|+. ++++||+++.+++++++++++|+++++
T Consensus 339 ~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 339 FLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred hhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 7764 489999998888999999999999875
No 55
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=304.85 Aligned_cols=329 Identities=23% Similarity=0.390 Sum_probs=291.9
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
+.|+|..|....| +++|+|+. +...++.+++|++|+|.++|++.++.+|.++|.+||+|.|+|+.|...++..
T Consensus 97 N~Yaps~G~~~AR------~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~ 170 (447)
T KOG0259|consen 97 NGYAPSVGILPAR------RAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYS 170 (447)
T ss_pred CCcCCccccHHHH------HHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhc
Confidence 5699999999999 99999988 7777889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+|+++++-++.+|++|++.++..+++++.++++.||+||+|.+++.+-+++|++.|+++ ++++|.||+|.++.|.+.
T Consensus 171 ~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~kl-gi~vIaDEVY~~~vfg~~ 249 (447)
T KOG0259|consen 171 GLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKL-GIMVIADEVYGHTVFGDK 249 (447)
T ss_pred CceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHh-CCeEEehhhcceeecCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999988
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcCh--------hHHHHHHhhhhccccCCChHHHHHHHHHhcccC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--------HFVAACNKIQSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
...++.++... --++.++++||-+=.||||+||++.+. ..+..+..... -+.+++++.|.|+-..|+.-
T Consensus 250 pfvpmg~fssi-VPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kT- 326 (447)
T KOG0259|consen 250 PFVPMGKFSSI-VPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKT- 326 (447)
T ss_pred Cccchhhcccc-CceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhC-
Confidence 88787777652 456889999999988999999998643 23444554433 34689999999999999873
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCce-ecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
..+++....+.++.+.+.-.+.|+.+|++. ...|++.+|+|+.+.-. ... ...+..+++..|.++..+.+.|
T Consensus 327 -p~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s---~~~---~~~dD~dFc~kL~~Eesv~~LP 399 (447)
T KOG0259|consen 327 -PEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLS---LFP---DIEDDVDFCQKLAREESVICLP 399 (447)
T ss_pred -hHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchh---hhc---cccccHHHHHHHhhhcceEEec
Confidence 368889999999999999999999999999 66899999999876421 011 1137889999999888999999
Q ss_pred CCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 312 GDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 312 g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
|..|+.++|+|+++..+.+.+++++++|+++..+-.
T Consensus 400 G~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 400 GQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred cccccCCCeEEEEEccChHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999987654
No 56
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1e-44 Score=335.32 Aligned_cols=311 Identities=20% Similarity=0.263 Sum_probs=267.3
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
..|+++.|..++| +.+++++++.. ..+++|++|+|+++++..++.+++++||.|++++|+|..+...++..|
T Consensus 115 ~~Y~~~~g~~~lr------~~ia~~~~~~~--~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g 186 (431)
T PRK15481 115 RLYGDAPVSPELH------AWAARWLRDDC--PVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAG 186 (431)
T ss_pred hhcCCcCCCHHHH------HHHHHHHhhcc--CCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcC
Confidence 3588899999999 99999998321 135699999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEc-CCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
.+++.++++++ ++|+++|++++++++++++++ +||||||.+++.+++++|+++|+++++++||+||+|.++.+.+.
T Consensus 187 ~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~ 263 (431)
T PRK15481 187 FSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY 263 (431)
T ss_pred CeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC
Confidence 99999998632 379999999998788888886 99999999999999999999999876899999999999875432
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
.+... .+.+++++++||||.+| +|+|+||+++++++++.+.........+.|.+.|.++..+++++.. .+++++
T Consensus 264 --~~~~~--~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~l~~ 337 (431)
T PRK15481 264 --HSVIP--QTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEY-QARLAQ 337 (431)
T ss_pred --CCCCc--CCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccH-HHHHHH
Confidence 22222 23468999999999999 9999999999999999987665555556899999999999987432 466888
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC---
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--- 317 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--- 317 (352)
.++.++++++.+.+.|++. ++.+..|++|+|+|++++. +..++++.|.+ .||.+.||..|+.
T Consensus 338 ~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~-------------~~~~~~~~l~~-~gV~v~pg~~f~~~~~ 402 (431)
T PRK15481 338 ARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDT-------------DSQATALTLAK-SGWLVREGEAFGVSAP 402 (431)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCC-------------CHHHHHHHHHH-CCcEEecCCccccCCC
Confidence 9999999999999999987 8888789999999999974 46788888876 5999999998864
Q ss_pred CCeEEEEeec-CHHHHHHHHHHHHHHHh
Q 018665 318 DTCIRISYAA-SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 318 ~~~iRi~~~~-~~~~l~~~~~~l~~~~~ 344 (352)
.+++||+++. +++++++++++|++++.
T Consensus 403 ~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 403 SHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred CCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 3589999998 88999999999999874
No 57
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.2e-43 Score=325.64 Aligned_cols=329 Identities=29% Similarity=0.439 Sum_probs=265.2
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|+++.|.+++| +++|+++. +....+++++|++++|+++++..++.+++++||+|++++|+|..+...++..
T Consensus 66 ~~Y~~~~G~~~lr------~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~ 139 (404)
T PRK09265 66 QGYSDSKGLFSAR------KAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLS 139 (404)
T ss_pred CCCCCCCCcHHHH------HHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHc
Confidence 3588899999999 99999998 4444688999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++.+.++++.+|++++++.++++++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|.++.+++.
T Consensus 140 g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~ 218 (404)
T PRK09265 140 GGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQH-NLIIFADEIYDKILYDGA 218 (404)
T ss_pred CCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEehhhhhccCCCC
Confidence 9999999876556677999999999988899999999999999999999999999999999 999999999999888765
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEc--Chh----HHHHHHhhhhccccCCChHHHHHHHHHhcccCCC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
...++..+.. ..+++++.|+||.+|++|+|+||+++ ++. +++.+... .....++|.+.|.++.+++.....
T Consensus 219 ~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~- 295 (404)
T PRK09265 219 VHISIASLAP-DLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQS- 295 (404)
T ss_pred CcCCHHHcCC-CceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchh-
Confidence 5556555543 24689999999999889999999995 444 33333322 223456889999999999964110
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~ 314 (352)
.....+..+.+.++++.+.+.|++++++.+..|.+|+|+|++++.... . ..+..+....++++.||.+.||..
T Consensus 296 ~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~---~----~~~~~~~~~~~l~~~gv~v~pg~~ 368 (404)
T PRK09265 296 INELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVY---P----IHDDEQFVLDLLLQEKVLLVQGTG 368 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEeccccc---C----CCCHHHHHHHHHHhCCEEEECchh
Confidence 111222234677788899999988888888889999999999875210 0 003344444455566999999998
Q ss_pred CC--CCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 315 FG--DDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 315 ~~--~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
|+ .++++|++++.+++++++++++|+++++.+.
T Consensus 369 F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 369 FNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGYR 403 (404)
T ss_pred hCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhc
Confidence 85 3579999997799999999999999987653
No 58
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=3.1e-43 Score=322.51 Aligned_cols=312 Identities=27% Similarity=0.387 Sum_probs=254.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+|+.|.+++| +++|+++.+.+ +++++|++|+|+++++..+ ..++.+||+|++++|+|..+...++..|.
T Consensus 70 ~Y~p~~g~~~lr------~aia~~~~~~~--~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~ 140 (402)
T TIGR03542 70 GYGPEQGYPFLR------EAIAENDYRGR--IDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGR 140 (402)
T ss_pred CCCCCCCCHHHH------HHHHHHHHhcC--CCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCC
Confidence 488999999999 99999875322 6889999999999999976 45568899999999999999999999999
Q ss_pred -----------eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 83 -----------TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 83 -----------~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+++.++.+.++++..|.++ .++++++++++||||||.+++.+++++|+++|+++ |++||+||+
T Consensus 141 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~ 214 (402)
T TIGR03542 141 AGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH-GSLILFDAA 214 (402)
T ss_pred ccccccccccceEEEeecchhhCCCCCccc-----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CeEEEEEch
Confidence 9999988655555555432 14789999999999999999999999999999999 999999999
Q ss_pred ccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHH--------HHHHhhhhccccCCChHHHHH
Q 018665 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--------AACNKIQSQFTSGASSISQKA 223 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 223 (352)
|.++.+++..+.++..++...+++++++||||.+|++|+|+||++++++++ ..+.........+++.+.|.+
T Consensus 215 y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~ 294 (402)
T TIGR03542 215 YSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRA 294 (402)
T ss_pred hhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHH
Confidence 999877654344444554434688999999999999999999999998876 222221212233578899998
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
+..++.... ..+..+.++.++++++.+.+.|++. ++.+..+.+|+|+|+++++.. ++.++++.|++
T Consensus 295 ~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~~~-----------~~~~l~~~l~~ 360 (402)
T TIGR03542 295 AEAAYAGEG--LQPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYLWVKTPEGI-----------SSWDFFDFLLY 360 (402)
T ss_pred HHHHHcCcc--hhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEEEEECCCCC-----------CHHHHHHHHHH
Confidence 888887532 2456677788999999999999987 788877788999999998642 67789999887
Q ss_pred ccCEEeccCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 304 KAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 304 ~~gi~i~~g~~~~~--~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
+.||.+.||..|+. ++++||++..+++++++++++|++++
T Consensus 361 ~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 361 QYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEAL 402 (402)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhhC
Confidence 77999999998764 47999998778899999999998763
No 59
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.8e-43 Score=318.39 Aligned_cols=313 Identities=28% Similarity=0.465 Sum_probs=266.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|++..|..++| +.++++++ .++..+++++|++++|+++++..++.+++++||.|++++|+|..+...++..
T Consensus 67 ~~y~~~~g~~~lr------~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~ 140 (394)
T PRK06836 67 HGYMPNAGYPEVR------EAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNH 140 (394)
T ss_pred ccCCCCCCCHHHH------HHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc
Confidence 3588889999999 99999999 7788889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh------CCCEEEEecccccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK------HPRLLVLSDEIYEH 154 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~------~~~~~livD~~~~~ 154 (352)
|.+++.++++++ ++.+|+++++++++++++++++++|+||||.++|.+++++|+++|++ + |+++|+||+|.+
T Consensus 141 g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~-~~~ii~De~y~~ 218 (394)
T PRK06836 141 GGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGR-PIYLISDEPYRE 218 (394)
T ss_pred CCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCC-CeEEEEeccccc
Confidence 999999998753 46799999999998899999999999999999999999999999999 9 999999999999
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHH---HHh---hhhc-cccCCChHHHHHHHHH
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA---CNK---IQSQ-FTSGASSISQKAGVAA 227 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~---~~~---~~~~-~~~~~~~~~~~~~~~~ 227 (352)
+.+.+....++.. ..+++++++|+||.+|++|+|+||+++++++.+. ... .... ....++.+.|.++...
T Consensus 219 ~~~~~~~~~~~~~---~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 295 (394)
T PRK06836 219 IVYDGAEVPYIFK---YYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKC 295 (394)
T ss_pred cccCCCCCCChHH---ccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHH
Confidence 8776543333322 2468999999999999999999999998876332 111 1111 1135778889888888
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
+.. .. .+..++++++.+.+.|+++ |+.+..+.+|+++|+.+|.. +..++++.|.+ +||
T Consensus 296 l~~----~~----~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~------------~~~~~~~~l~~-~gv 353 (394)
T PRK06836 296 LDA----TV----DVSIYKRNRDLLYDGLTEL-GFECVKPQGAFYLFPKSPEE------------DDVAFCEKAKK-HNL 353 (394)
T ss_pred hCC----hH----HHHHHHHHHHHHHHHHHhC-CCEeecCCceEEEEEeCCCC------------CHHHHHHHHHh-CCE
Confidence 874 11 2456788889999999988 88888889999999998763 67788877765 599
Q ss_pred EeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 308 ALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+.||..|+.++++||+++.+++++++++++|+++++++.
T Consensus 354 ~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 354 LLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred EEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999887899999999899999999999999998764
No 60
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-43 Score=324.88 Aligned_cols=329 Identities=23% Similarity=0.331 Sum_probs=260.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hc-CCCC-C--CCcEEEeCChHHHHHHHHHH-----hcCCCCEEEecCCCCCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-EN-GLSY-T--PDQILVSNGAKQSILQAVLA-----VCSPGDEVIIPAPFWVS 72 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~-~~~~-~--~~~i~~~~g~~~a~~~~~~~-----l~~~~~~vl~~~~~~~~ 72 (352)
+|+++.|..++| +++++++. +. +... . .++|++|+|+++++..++.+ ++++||+|++++|+|..
T Consensus 129 ~Y~~~~g~~~lr------eaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~ 202 (527)
T PRK09275 129 NYPVPDRMLKHT------EKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTP 202 (527)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHH
Confidence 599999999999 99999665 42 3222 2 34999999999999999886 68999999999999999
Q ss_pred hHHHHHhcC--CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHH--hCCCEEEEe
Q 018665 73 YPEMARIAD--ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVA--KHPRLLVLS 148 (352)
Q Consensus 73 ~~~~~~~~g--~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~--~~~~~~liv 148 (352)
|...++..| .+++.++.+++++|.+|+++++++++++++++++++||||||.+++.+++++|+++|+ ++ |++||+
T Consensus 203 Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~-~l~II~ 281 (527)
T PRK09275 203 YLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRP-DLMIIT 281 (527)
T ss_pred HHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCC-CcEEEE
Confidence 999888775 5555555555567999999999999889999999999999999999999999999995 45 899999
Q ss_pred cccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh-----HHHHH------------------
Q 018665 149 DEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-----FVAAC------------------ 205 (352)
Q Consensus 149 D~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-----~~~~~------------------ 205 (352)
||+|..+.+ ...++... ..++++++.|+||.+|++|+|+||++++++ +++.+
T Consensus 282 DEvY~~f~~---~~~s~~~~--~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~ 356 (527)
T PRK09275 282 DDVYGTFVD---DFRSLFAV--LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTD 356 (527)
T ss_pred CCCChhhcc---cccCHHHh--CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCC
Confidence 999998764 12343332 246899999999999999999999999876 33322
Q ss_pred --------------HhhhhccccCCChHHHHHH-----HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC
Q 018665 206 --------------NKIQSQFTSGASSISQKAG-----VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 266 (352)
Q Consensus 206 --------------~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 266 (352)
+......+.+.+++.|.++ .++++. .+.+.++.++.+++|++.+.+.|. . ++...+
T Consensus 357 p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~---~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~~~ 431 (527)
T PRK09275 357 PEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDE---EDAYKKAMKDIIRRRYKALYEGLG-L-PEPEDP 431 (527)
T ss_pred cchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhC---chHHHHHHHHHHHHHHHHHHHHcC-C-CCcCCC
Confidence 4555566778888888862 344553 357788899999999999999883 2 344457
Q ss_pred CCCceEEEeecCCcc----CCcccCCC-CCCChHHHHHHHHHccCEEeccCCCCCC-CCeEEEEeec-CHHHHHHHHHHH
Q 018665 267 PQGAFYLFIDFSTYY----GSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAA-SLTTLQAAVERI 339 (352)
Q Consensus 267 ~~~g~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~l~~~~gi~i~~g~~~~~-~~~iRi~~~~-~~~~l~~~~~~l 339 (352)
+.+++|+|++++... +..+..+- ...+..+++.+|+++.||.+.||+.|+. ++++|+|++. +++++.++.++|
T Consensus 432 p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl 511 (527)
T PRK09275 432 NNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAI 511 (527)
T ss_pred CCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHH
Confidence 899999999987531 11110000 0015789999999999999999999975 5789999996 889999999999
Q ss_pred HHHHhhhCC
Q 018665 340 KKGLLTLRP 348 (352)
Q Consensus 340 ~~~~~~~~~ 348 (352)
++++.++..
T Consensus 512 ~~~l~~y~~ 520 (527)
T PRK09275 512 RKLLDEYYE 520 (527)
T ss_pred HHHHHHHHH
Confidence 999987754
No 61
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=8.5e-43 Score=315.94 Aligned_cols=300 Identities=26% Similarity=0.376 Sum_probs=255.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCC-CCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLS-YTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~-~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
.|+++.|.+++| +++++++. ++|++ +++++|++|+|+++++..+...+ +++||.|++++|+|..+...++.
T Consensus 57 ~Y~~~~G~~~lr------~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~ 130 (364)
T PRK07865 57 GYPTTAGTPELR------EAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARL 130 (364)
T ss_pred CCCCccCCHHHH------HHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHh
Confidence 588889999999 99999999 77886 88999999999999999888887 78999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++. ++++.. ++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++
T Consensus 131 ~g~~~~~~~~---------~~~l~~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~ 197 (364)
T PRK07865 131 AGATVVRADS---------LTELGP---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARER-GAVVASDECYLELGWDA 197 (364)
T ss_pred cCCEEEecCC---------hhhCCc---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhhhccCC
Confidence 9999888752 233322 5789999999999999999999999999999999 99999999999887755
Q ss_pred CCccccccC--CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHH
Q 018665 160 ATHTSFASL--PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 160 ~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
.....+... +...+++++++|+||.+|++|+|+||+++++++++.+.........+++++.|.++..++.. .++
T Consensus 198 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~ 273 (364)
T PRK07865 198 EPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGD----DAH 273 (364)
T ss_pred CCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC----HHH
Confidence 321111111 12357899999999999989999999999999999988776666677899999999999875 677
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG- 316 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~- 316 (352)
.++.++.++++++.+.+.|++. |+.+..+++|+++|+.++. +..++.+.|.+ .||.+.||..|+
T Consensus 274 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~-~gv~v~pg~~f~~ 338 (364)
T PRK07865 274 VREQRERYARRRAVLRPALEAA-GFRVDHSEAGLYLWATRGE-------------DCWDTVAWLAE-RGILVAPGDFYGP 338 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEEEEEeCCC-------------CHHHHHHHHHH-CCEEEeCccccCc
Confidence 8888999999999999999987 8888888899999998743 56677777765 499999998775
Q ss_pred -CCCeEEEEeecCHHHHHHHHHHHH
Q 018665 317 -DDTCIRISYAASLTTLQAAVERIK 340 (352)
Q Consensus 317 -~~~~iRi~~~~~~~~l~~~~~~l~ 340 (352)
.++++||+++.+++++++++++|+
T Consensus 339 ~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 339 AGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred CCCCEEEEEecCCHHHHHHHHHHhh
Confidence 357999999888899999999885
No 62
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=2.2e-44 Score=326.97 Aligned_cols=315 Identities=30% Similarity=0.521 Sum_probs=275.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~ 78 (352)
..|++..|.+++| +++|++++ +.+++.+++ +|++++|+++++..+...+ .+++++|++++|+|..+...++
T Consensus 38 ~~Y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~ 111 (363)
T PF00155_consen 38 LGYPPPQGYPELR------EAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAAR 111 (363)
T ss_dssp TSSTCTTHHHHHH------HHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHH
T ss_pred ccCCCchhhHHHH------HHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCcccccccccc
Confidence 4689999999999 99999999 899999999 9999999999999999999 7899999999999999999999
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
..|.+++.+++..+.++.+|+++|++.+++ +++++++++|+||||..++.+++++|+++|+++ |+++|+||+|
T Consensus 112 ~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~-~~~ii~De~y 190 (363)
T PF00155_consen 112 LLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREY-NIIIIVDEAY 190 (363)
T ss_dssp HTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHT-TSEEEEEETT
T ss_pred ccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhccc-ccceeeeece
Confidence 999999999988778888999999999976 578999999999999999999999999999999 9999999999
Q ss_pred cccccCCCCccc-cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhccc
Q 018665 153 EHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 231 (352)
+++.+......+ ...... ..+++++.|+||.+|++|+|+||+++++++++.++.....+.. +.+.+.++..++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~ 267 (363)
T PF00155_consen 191 SDLIFGDPDFGPIRSLLDE-DDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDP 267 (363)
T ss_dssp TTGBSSSSHTHHHHGHHTT-TSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHH
T ss_pred eccccCCCccCcccccccc-cccceeeeeccccccccccccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcc
Confidence 998876542222 222222 4568999999999999999999999999999999988776653 888888888888873
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 232 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
....++++++++.++++++.+.+.|++. ++.+..+++|+++|+.++.. ++.+++++|+++.||.+.|
T Consensus 268 ~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~~gi~v~p 334 (363)
T PF00155_consen 268 ELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLDPN------------DAEELAQELLEEYGILVRP 334 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEESHH------------HHHHHHHHHHHHHTEEEEE
T ss_pred cccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEcccc------------hHHHHHHHHHHhCCEEEEe
Confidence 2112388899999999999999999988 99999889999999998753 5789999999887999999
Q ss_pred CCCCCCCCeEEEEe-ecCHHHHHHHHHHH
Q 018665 312 GDAFGDDTCIRISY-AASLTTLQAAVERI 339 (352)
Q Consensus 312 g~~~~~~~~iRi~~-~~~~~~l~~~~~~l 339 (352)
|..|+.++++|+++ ..+++++++++++|
T Consensus 335 g~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 335 GSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp GGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 99998899999999 44999999999886
No 63
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=4e-42 Score=310.43 Aligned_cols=299 Identities=26% Similarity=0.375 Sum_probs=253.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCC-CCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLS-YTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~-~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
.|.++.|..++| +++++++. +++++ +++++|++|+|+++++..++..+ .++||.|++++|+|..+...++.
T Consensus 51 ~Y~~~~G~~~lr------~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~ 124 (357)
T TIGR03539 51 GYPQTWGTPELR------EAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALL 124 (357)
T ss_pred CCCcccCCHHHH------HHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHh
Confidence 588889999999 99999999 77886 89999999999999999988887 79999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++ +++++. .++++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|.++.+.+
T Consensus 125 ~g~~~~~v~---------~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~ 191 (357)
T TIGR03539 125 AGATPVAAD---------DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARER-GAVVASDECYLELGWEG 191 (357)
T ss_pred cCCEEeccC---------ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHc-CeEEEEecchhhhccCC
Confidence 999988774 223332 24789999999999999999999999999999999 99999999999887755
Q ss_pred CCcccccc--CCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHH
Q 018665 160 ATHTSFAS--LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 160 ~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
.....+.. .+...+++++++|+||.+|++|+|+||+++++++++.+.+.......+++.+.|.++.++++. ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~ 267 (357)
T TIGR03539 192 RPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD----DGH 267 (357)
T ss_pred CCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC----HHH
Confidence 32111111 122356899999999999889999999999999999988776655677899999999999874 567
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
.++.+..++++++.+.+.|++. |+.+..+.+|+++|++++. +..++.+.|.+ .||.+.||..|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~~~~~~~~-------------~~~~~~~~l~~-~gV~v~pg~~f~~ 332 (357)
T TIGR03539 268 VAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYLWATRGE-------------DAWDTVDRLAE-LGILVAPGDFYGP 332 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEEEEEECCC-------------CHHHHHHHHHh-CCEEECCccccCC
Confidence 7888889999999999999986 8888888999999998753 56678888765 5999999987753
Q ss_pred --CCeEEEEeecCHHHHHHHHHHH
Q 018665 318 --DTCIRISYAASLTTLQAAVERI 339 (352)
Q Consensus 318 --~~~iRi~~~~~~~~l~~~~~~l 339 (352)
++++||+++.+++++++++++|
T Consensus 333 ~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 333 AGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred CCCCeEEEEecCCHHHHHHHHHhh
Confidence 4799999999889999999876
No 64
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-42 Score=319.11 Aligned_cols=313 Identities=16% Similarity=0.149 Sum_probs=253.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEE--EeCChHHHHHHHHH---HhcCCCCEEEecCCCCCChHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQIL--VSNGAKQSILQAVL---AVCSPGDEVIIPAPFWVSYPE 75 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~--~~~g~~~a~~~~~~---~l~~~~~~vl~~~~~~~~~~~ 75 (352)
..|+++.|.+++| +++++++. +.+..+++++|. .|.|+++++..++. +++++||+|++++|+|+.|..
T Consensus 66 ~~Y~~~~G~~~lR------~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~ 139 (404)
T PTZ00376 66 KEYLPIEGLQSFI------EAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN 139 (404)
T ss_pred CCCCCCCCCHHHH------HHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH
Confidence 4699999999999 99999997 555567888998 58999999987765 568999999999999999999
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.++..|.+++.+++.+++++++|++.+++.++ ++++++++++||||||.+++.+++++|+++|++| +++||+||+|
T Consensus 140 ~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y 218 (404)
T PTZ00376 140 IFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRK-NLIPFFDMAY 218 (404)
T ss_pred HHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEehhh
Confidence 99999999999999544567899999999885 3456777899999999999999999999999999 9999999999
Q ss_pred cccccCCC--CccccccCCCCCCceEEEeccccccccccceeEEE---EcChhHHHHH----HhhhhccccCCChHHHHH
Q 018665 153 EHIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI---AGPKHFVAAC----NKIQSQFTSGASSISQKA 223 (352)
Q Consensus 153 ~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 223 (352)
.++.+.+. ...++..+....++++++.||||.++++|+|+||+ ++++++++.+ .+.......+.+.+.|.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~ 298 (404)
T PTZ00376 219 QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARI 298 (404)
T ss_pred cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHH
Confidence 99887541 12233333333468999999999999999999998 5787755544 333333334567789999
Q ss_pred HHHHhcccCCCh---HHHHHHHHHHHHHHHHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHH
Q 018665 224 GVAALGLGYAGG---EVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESL 297 (352)
Q Consensus 224 ~~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
+..+++++...+ +.+++.+++++++++.+.+.|+++. ++.+..+++|+|+|++++ .++
T Consensus 299 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~----------------~~~ 362 (404)
T PTZ00376 299 ADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT----------------KEQ 362 (404)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC----------------HHH
Confidence 999997621111 2355667788999999999998862 355667899999999753 467
Q ss_pred HHHHHHccCEEeccCCCCCCCCeEEEEee-cCHHHHHHHHHHHHHHHhh
Q 018665 298 CRYLLDKAQVALVPGDAFGDDTCIRISYA-ASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 298 ~~~l~~~~gi~i~~g~~~~~~~~iRi~~~-~~~~~l~~~~~~l~~~~~~ 345 (352)
+++|.+++||.+.||+ |++++ .+.+++++++++|++++..
T Consensus 363 ~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 363 VERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHHHHHhc
Confidence 8889988899999972 99998 4889999999999998753
No 65
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=5.6e-42 Score=315.67 Aligned_cols=330 Identities=23% Similarity=0.343 Sum_probs=255.1
Q ss_pred ccCCCCCChhhhccchhhHHHHH-HHH-hcCCC-CCCC--cEEEeCChHHHHHHHHHH-----hcCCCCEEEecCCCCCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVI-NLK-ENGLS-YTPD--QILVSNGAKQSILQAVLA-----VCSPGDEVIIPAPFWVS 72 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~-~~~-~~~~~-~~~~--~i~~~~g~~~a~~~~~~~-----l~~~~~~vl~~~~~~~~ 72 (352)
+|+++.+..+++ +++++ ++. +++.. ..++ +|++|+|+++++..++.+ ++++||+|++++|+|..
T Consensus 123 ~Y~~p~g~~~~~------e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~ 196 (521)
T TIGR03801 123 NYPVPDRMLPHS------EKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTP 196 (521)
T ss_pred CCCCCCCCHHHH------HHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHH
Confidence 577778888888 77774 656 44433 3334 899999999999998887 68999999999999999
Q ss_pred hHHHHHhc--CCeEEEecccCCCC-----cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCE
Q 018665 73 YPEMARIA--DATPVILPTRISEN-----FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRL 144 (352)
Q Consensus 73 ~~~~~~~~--g~~v~~i~~~~~~~-----~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~ 144 (352)
|...++.. |.+++.++.+.+.+ |.+|+++++++++++++++++++||||||.+++.+++++|+++|+++ +|+
T Consensus 197 y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l 276 (521)
T TIGR03801 197 YLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDL 276 (521)
T ss_pred HHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCe
Confidence 99987765 67777777764333 88999999998888999999999999999999999999999999874 389
Q ss_pred EEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh-----HHHH---------------
Q 018665 145 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-----FVAA--------------- 204 (352)
Q Consensus 145 ~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-----~~~~--------------- 204 (352)
+||+||+|+.+.+ ...++... ..++++++.|+||.+|++|+|+||++++++ +++.
T Consensus 277 ~II~DEvY~~f~~---~~~sl~~~--~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~ 351 (521)
T TIGR03801 277 MILTDDVYGTFVD---DFRSLFAE--LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSS 351 (521)
T ss_pred EEEECCCchhhcc---cccchhhh--CCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhcc
Confidence 9999999998764 22344333 246899999999999999999999998764 2211
Q ss_pred -----------------HHhhhhccccCCChHHHH-----HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 018665 205 -----------------CNKIQSQFTSGASSISQK-----AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 262 (352)
Q Consensus 205 -----------------~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 262 (352)
.+......+.+.+++.|. ++.++++. ...+.++.++.+++|++.+.+.| .. .+
T Consensus 352 ~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~---~~~y~~~~~~~~~~R~~~l~~~L-g~-~~ 426 (521)
T TIGR03801 352 LTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK---ENAYKAETKDICRRREKLLFRGL-GL-PL 426 (521)
T ss_pred ccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc---chhHHHHHHHHHHHHHHHHHHhc-CC-CC
Confidence 133444555677777776 34445543 35788889999999999999998 22 23
Q ss_pred eecCCCCceEEEeecCCcc----CCcccCCC-CCCChHHHHHHHHHccCEEeccCCCCCC-CCeEEEEeec-CHHHHHHH
Q 018665 263 KMSEPQGAFYLFIDFSTYY----GSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAA-SLTTLQAA 335 (352)
Q Consensus 263 ~~~~~~~g~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~l~~~~gi~i~~g~~~~~-~~~iRi~~~~-~~~~l~~~ 335 (352)
...++.+++|+|+++++.. +..+..+- .-.+..+++.+|+++.||.+.||..|+. .+++|+|++. ++++++++
T Consensus 427 ~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~ 506 (521)
T TIGR03801 427 QEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEI 506 (521)
T ss_pred cCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHH
Confidence 3456889999999997521 00000000 0015678999999999999999999986 4579999995 88999999
Q ss_pred HHHHHHHHhhhCC
Q 018665 336 VERIKKGLLTLRP 348 (352)
Q Consensus 336 ~~~l~~~~~~~~~ 348 (352)
.++|+++++++..
T Consensus 507 ~~rl~~~~~~~~~ 519 (521)
T TIGR03801 507 GRAIRKILDEYYE 519 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987643
No 66
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-42 Score=313.89 Aligned_cols=300 Identities=19% Similarity=0.313 Sum_probs=255.6
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCe
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
|+|+.|..++| +.+|++++ +++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+
T Consensus 60 ~Yp~~g~~~Lr------~aia~~~~-----~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~ 128 (366)
T PRK01533 60 LYPDGGATTLR------QTIANKLH-----VKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCE 128 (366)
T ss_pred cCCCCCHHHHH------HHHHHHhC-----CCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCE
Confidence 34788999999 99999996 78999999999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.++++ ++.+|++++++.++++++++++++||||||.+++.+++++|+++|+++ ++ +|+||+|.++.+.+...
T Consensus 129 v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~-~~-~iiDe~y~~~~~~~~~~- 202 (366)
T PRK01533 129 VKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISEN-TL-IVIDEAYYEYVTAKDFP- 202 (366)
T ss_pred EEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCC-CE-EEEEccHHHhhccccCc-
Confidence 9999985 335899999999988899999999999999999999999999999887 74 66799999876543222
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+.......++++++++||||.+|++|+|+||+++++++++.+.+... .+++|.+.|.++.++++. .++.++.++
T Consensus 203 ~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~--~~~~~~~~q~aa~~~l~~----~~~~~~~~~ 276 (366)
T PRK01533 203 ETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRL--PFNVSSLAQKAATIAFGD----DEFIEEIVR 276 (366)
T ss_pred chhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcC--CCCcCHHHHHHHHHHhCC----HHHHHHHHH
Confidence 22222223579999999999999999999999999999999987653 467999999999999975 678888888
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEE
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 323 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi 323 (352)
..+++++++.+.++.+ |+.+..+ .|+|+|++++ ++.++.+.|.++ ||.|++ | ++++||
T Consensus 277 ~~~~~r~~~~~~l~~~-g~~~~~~-~~nf~~~~~~--------------~~~~~~~~l~~~-GI~Vr~---~--~~~iRi 334 (366)
T PRK01533 277 VNTEGLRQYESFCKEN-EIPFYQS-QTNFIFLPVE--------------NGGEIYEACAHA-GFIIRP---F--PNGVRI 334 (366)
T ss_pred HHHHHHHHHHHHHHhC-CCccCCC-cCcEEEEeCC--------------CHHHHHHHHHHC-CcEEcc---C--CCceEE
Confidence 8888999999999887 8887765 5667888875 456788888865 999987 3 689999
Q ss_pred EeecCHHHHHHHHHHHHHHHhhhCCC
Q 018665 324 SYAASLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 324 ~~~~~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
+++.+ ++.+++++.|+++++..+++
T Consensus 335 s~~~~-~~~~~l~~al~~~~~~~~~~ 359 (366)
T PRK01533 335 TVGTR-EQNEGVISVLQQHFENKKRK 359 (366)
T ss_pred eCCCH-HHHHHHHHHHHHHHHhcccc
Confidence 98875 78899999999998877664
No 67
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=6.9e-42 Score=315.45 Aligned_cols=321 Identities=17% Similarity=0.303 Sum_probs=255.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC-----CCCEEEe-cCCCCCChH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS-----PGDEVII-PAPFWVSYP 74 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-----~~~~vl~-~~~~~~~~~ 74 (352)
..|+++.|..++| +++|+++. ++|+.+++++|++|+|+++++..++.++++ +||.|++ ++|+|+.|.
T Consensus 68 ~~Y~~~~G~~~LR------~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~ 141 (416)
T PRK09440 68 GNYDGPQGKDELI------EALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYA 141 (416)
T ss_pred ccCCCCCCCHHHH------HHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhH
Confidence 3688899999999 99999998 789999999999999999999999999985 5789999 699999998
Q ss_pred HHHHhcCC----eEEEecccCCC-CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 75 EMARIADA----TPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 75 ~~~~~~g~----~v~~i~~~~~~-~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
..+...+. ....++++.+. ++.+|+++|+ +.++++++++++||||||.+++.+++++|+++|+++ |++||+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~D 218 (416)
T PRK09440 142 DAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQH-NIPLLID 218 (416)
T ss_pred HHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHc-CCcEEEe
Confidence 76654332 22233333211 4678999987 456788999999999999999999999999999999 9999999
Q ss_pred ccccccccCCCCccccccC-CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHh
Q 018665 150 EIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAAL 228 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 228 (352)
|+|+.+.. . ..+... +...+++++++|+||. +++|+|+||+++++++++.+.........++|.+.|.++..++
T Consensus 219 e~Y~~~~~-~---~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l 293 (416)
T PRK09440 219 NAYGPPFP-G---IIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMI 293 (416)
T ss_pred CCccccCC-C---cchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHh
Confidence 99975321 0 111111 1114789999999996 8899999999999999999988777667789999999999999
Q ss_pred cccCCChHHHHH-HHHHHHHHHHHHHHHhccc-C--CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 229 GLGYAGGEVVSK-MVKAFRERRDFLVKSFGEL-E--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 229 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~-~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
+.+.. ..+..+ ++..++++++.+.+.|++. + ++.+..|++|+|+|+++++.. .+..++.+.|.+
T Consensus 294 ~~~~~-~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~----------~~~~~~~~~l~~- 361 (416)
T PRK09440 294 ESGDL-LRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLP----------ITTEELYQRLKA- 361 (416)
T ss_pred ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCC----------CCHHHHHHHHHH-
Confidence 87432 233333 5677788888888887653 3 356668889999999998621 166788888765
Q ss_pred cCEEeccCCCCCC---------CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 305 AQVALVPGDAFGD---------DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 305 ~gi~i~~g~~~~~---------~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.||.+.||+.|+. .+++||+++.+++++++++++|++++++...
T Consensus 362 ~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 362 RGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred CCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 5999999988743 2589999988889999999999999987554
No 68
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.2e-42 Score=309.03 Aligned_cols=301 Identities=21% Similarity=0.376 Sum_probs=252.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
+| |+.+..++| +++|++++ +++++|++|+|+++++..++.++ .+ ++|+++.|+|..+...++..|.
T Consensus 50 ~Y-~~~~~~~lr------~~ia~~~~-----~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~ 115 (354)
T PRK06358 50 EY-PDPDYLELR------KRIASFEQ-----LDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYERALKAFDA 115 (354)
T ss_pred cC-CCccHHHHH------HHHHHHhC-----CChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHHHcCC
Confidence 46 456788999 99999996 78999999999999999999887 43 6899999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++.++++.+| +++.+.+.++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++...
T Consensus 116 ~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~ 193 (354)
T PRK06358 116 EIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKR-NIYLIIDEAFMDFLEENETI 193 (354)
T ss_pred eeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhc-CCEEEEeCcccccCCCccch
Confidence 9999998766677888 666666666889999999999999999999999999999999 99999999999988765432
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..+..+. ..+++++++|+||.+|++|+|+||++++ +.+++.+..... .++.+.+.|.++..+++. .+++++.
T Consensus 194 ~~~~~~~-~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~----~~~~~~~ 266 (354)
T PRK06358 194 SMINYLE-NFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE--PWSINTFADLAGQTLLDD----KEYIKKT 266 (354)
T ss_pred hHHHhcc-CCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--CCcchHHHHHHHHHHhcc----HHHHHHH
Confidence 2233332 3579999999999999999999999985 678888877654 356899999999999974 5677888
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DT 319 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~ 319 (352)
++.++++++.+.+.|++++++.+..+.+ .|+|++++ +..++++.|.++ ||.+.+|..|.. ++
T Consensus 267 ~~~~~~~r~~l~~~L~~~~~~~~~~~~g-~f~~~~~~--------------~~~~~~~~l~~~-gI~v~~~~~f~~~~~~ 330 (354)
T PRK06358 267 IQWIKEEKDFLYNGLSEFKGIKVYKPSV-NFIFFKLE--------------KPIDLRKELLKK-GILIRSCSNYRGLDEN 330 (354)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEcCCcc-eEEEEEcC--------------chHHHHHHHHHC-CeEEEECCCCCCCCCC
Confidence 9999999999999999887888777655 57888886 346888888875 999999998843 47
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHH
Q 018665 320 CIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
++||++..+ ++.+++++.|++++
T Consensus 331 ~iRls~~~~-~~~~~l~~~l~~~~ 353 (354)
T PRK06358 331 YYRVAVKSR-EDNKKLLKALEVIL 353 (354)
T ss_pred EEEEEeCCH-HHHHHHHHHHHHHh
Confidence 899998874 67788888887765
No 69
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-42 Score=312.33 Aligned_cols=299 Identities=22% Similarity=0.321 Sum_probs=255.5
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCe
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
|+|+.|..++| +.+|++++ +++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+
T Consensus 60 ~~p~~g~~~lr------~~ia~~~~-----~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~ 128 (359)
T PRK03158 60 LYPDGYAPELR------TKVAKHLG-----VDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAE 128 (359)
T ss_pred cCCCCcHHHHH------HHHHHHhC-----CCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCe
Confidence 56778999999 99999996 67899999999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
+..++++ ++.+|++.+++.++++++++++++||||||.++|.+++.++++.| ++ |+++|+||+|.++.+.+....
T Consensus 129 ~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~-~~-~~~ii~De~y~~~~~~~~~~~ 203 (359)
T PRK03158 129 VREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESV-PS-HVLVVLDEAYYEYVTAEDYPD 203 (359)
T ss_pred EEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC-CC-CcEEEEECchHhhcCCccccc
Confidence 9999986 345899999999888899999999999999999988888887766 37 999999999998876543222
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
.+... ...++++++.|+||.+|++|+|+||+++++++++.+...... +++|.+.|.++.++++. .++.++.++
T Consensus 204 ~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~----~~~~~~~~~ 276 (359)
T PRK03158 204 TLPLL-EKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP--FNTTRIAQYAAIAALED----QAFLKECVE 276 (359)
T ss_pred HHHHH-HhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcC----HHHHHHHHH
Confidence 22222 235789999999999999999999999999999998876543 56899999999999975 677888888
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEE
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 323 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi 323 (352)
.++++++.+.+.|++. ++.+. +..|+|+|++++. +..++++.|.++ ||.+.||..|+.++++||
T Consensus 277 ~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~-------------~~~~~~~~l~~~-gv~v~~g~~f~~~~~iRi 340 (359)
T PRK03158 277 KNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGR-------------DANELFEALLKK-GYIVRSGAALGFPTGVRI 340 (359)
T ss_pred HHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCC-------------CHHHHHHHHHHC-CeEEeeCCCCCCCCeEEE
Confidence 8899999999999887 77775 4567789998752 677899998865 999999998887899999
Q ss_pred EeecCHHHHHHHHHHHHHH
Q 018665 324 SYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 324 ~~~~~~~~l~~~~~~l~~~ 342 (352)
+++. .++.+++++.|+++
T Consensus 341 ~~~~-~~~~~~l~~al~~~ 358 (359)
T PRK03158 341 TIGL-KEQNDKIIELLKEL 358 (359)
T ss_pred ecCC-HHHHHHHHHHHHHh
Confidence 9885 68889999998875
No 70
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-41 Score=308.34 Aligned_cols=304 Identities=23% Similarity=0.336 Sum_probs=249.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hc--CCCCCCCcEEEeCChHHHHHHHHHHhcCCCC-EEEecCCCCCChHHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-EN--GLSYTPDQILVSNGAKQSILQAVLAVCSPGD-EVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~--~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~-~vl~~~~~~~~~~~~~~ 78 (352)
.| ++.|..++| +++|++++ ++ ++.+++++|++|+|+++++..++.+++.+++ .|+++.|+|..+...++
T Consensus 62 ~Y-~~~G~~~Lr------~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~ 134 (374)
T PRK02610 62 RY-PDGGHEALK------QAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQ 134 (374)
T ss_pred CC-CCCchHHHH------HHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHH
Confidence 46 568999999 99999999 54 5778899999999999999988888777775 89999999999999999
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
..|.+++.++++. +++++|+++|+++++ ++++++++++||||||.+++.++++++.++| + |++||+||+|.+
T Consensus 135 ~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~-~~~iI~De~Y~~ 210 (374)
T PRK02610 135 TLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--E-DILVVIDEAYFE 210 (374)
T ss_pred HcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--C-CcEEEEeccccc
Confidence 9999999999863 457899999999886 4789999999999999999999999998875 6 899999999998
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCC
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
+.+. ..+..+. ..+++++++||||.+|++|+|+||+++++++++.+...... ++.+.+.|.++..+++. .
T Consensus 211 ~~~~----~~~~~~~-~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~--~~~~~~~q~a~~~~l~~---~ 280 (374)
T PRK02610 211 FSQT----TLVGELA-QHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLP--YNLPSFSQLAAQLALEH---R 280 (374)
T ss_pred cCcc----chHHHHh-cCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcC---H
Confidence 7532 1222222 24678999999999999999999999999999998876533 45788999999988875 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~ 314 (352)
+.+.+.++..++ .++.+.+.|++++++.+ .|++|+|+|++++... +..++++.|.+ .||.+.++
T Consensus 281 ~~~~~~~~~~~~-~r~~l~~~L~~~~~~~~-~p~~g~f~~~~l~~~~-----------~~~~~~~~l~~-~gi~v~~~-- 344 (374)
T PRK02610 281 QELLAAIPEILQ-ERDRLYQALQELPQLRV-WPSAANFLYLRLSQDA-----------ALAALHQALKA-QGTLVRHT-- 344 (374)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhCCCcEe-CCCcceEEEEeCCCCC-----------CHHHHHHHHHH-CCEEEEeC--
Confidence 445555555444 46778888888777775 4788999999998642 67888888765 49999763
Q ss_pred CCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 315 FGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 315 ~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
++++||+++.+ +++++++++|+++++.+.
T Consensus 345 ---~~~lRls~~~~-~~~~~~l~~l~~~l~~~~ 373 (374)
T PRK02610 345 ---GGGLRITIGTP-EENQRTLERLQAALTQLE 373 (374)
T ss_pred ---CCeEEEeCCCH-HHHHHHHHHHHHHHhhcC
Confidence 57899999864 678999999999987653
No 71
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-41 Score=305.90 Aligned_cols=315 Identities=25% Similarity=0.401 Sum_probs=264.2
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
..|+++.|..++| +.+|++++ +++++|++++|+++++..++.+++++||.|++++|+|..+...++..|
T Consensus 60 ~~y~~~~g~~~lr------~~ia~~l~-----~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g 128 (380)
T PRK06225 60 CKYPPPEGFPELR------ELILKDLG-----LDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFG 128 (380)
T ss_pred CCCCCCcchHHHH------HHHHHhcC-----CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhC
Confidence 3577788999999 99999986 678899999999999999999999999999999999999989999999
Q ss_pred CeEEEecccC-CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 82 ATPVILPTRI-SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~-~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
.+++.++++. +.++.+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|.++... .
T Consensus 129 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~-~ 206 (380)
T PRK06225 129 AEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDN-DAFLLHDCTYRDFARE-H 206 (380)
T ss_pred ceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CcEEEEehhHHHHhcc-C
Confidence 9999999753 34578999999999988899999999999999999999999999999999 9999999999876432 1
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
.+...+ ..++++++.|+||.+|++|+|+||+++++++++.+..... ...+.+.+.+.++.++++. ..++.++
T Consensus 207 --~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~---~~~~~~~ 278 (380)
T PRK06225 207 --TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVI-NDLGTNVIAQEAAIAGLKV---KDEWIDR 278 (380)
T ss_pred --Cchhhc--CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHh-cccCCCHHHHHHHHHHHhc---chHHHHH
Confidence 222222 2468899999999999899999999999999998876542 3466888899888888875 2567778
Q ss_pred HHHHHHHHHHHHHHHhcccCCcee-cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+++.++++++.+.+.|++++++.+ ..+..|+++|++++... .+..++.+.|.++ ||.+.||..|+.
T Consensus 279 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~l~~~l~~~-gi~v~~g~~~~~~~ 347 (380)
T PRK06225 279 IRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG----------IDPEDLVEYLLER-KIFVRQGTYTSKRF 347 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc----------CCHHHHHHHHHHC-CEEEcCCcccCcCC
Confidence 888888888889999988767543 24567778899886421 1678899998855 999999876542
Q ss_pred -CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 318 -DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 -~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++++|++++.+++++++++++|++++++++.
T Consensus 348 ~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 348 GDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 4699999999999999999999999988764
No 72
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-41 Score=307.46 Aligned_cols=297 Identities=23% Similarity=0.376 Sum_probs=251.2
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
..| ++.+..++| +++|++++ +++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|
T Consensus 60 ~~Y-~~~~~~~lr------~~ia~~~~-----~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g 127 (357)
T PRK14809 60 HSY-PKASHADLT------AALADRWD-----VSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHH 127 (357)
T ss_pred hcC-CCCCHHHHH------HHHHHHhC-----CCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcC
Confidence 346 467889999 99999986 789999999999999999999999999999999999998888889999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
..++.++++.++++.++.+++++.. ++++++++++||||||.++|.+++++|+++|+ . +++||+||+|.++.+.+.
T Consensus 128 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~-~-~~~iI~De~y~~~~~~~~- 203 (357)
T PRK14809 128 GEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLDEVEALAERTD-E-ETLVVVDEAYGEFAERPS- 203 (357)
T ss_pred CeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCc-c-CcEEEEechhhhccCCch-
Confidence 9999999976567778888887765 36789999999999999999999999999886 4 678999999998865331
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..... ...+++++++||||.+|++|+|+||+++++++++.+.+... .++++.+.+.++.++++. .+++++.
T Consensus 204 --~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~l~~----~~~~~~~ 274 (357)
T PRK14809 204 --AVALV-EERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNT--PFAASELACRAGLAALDD----DEHVERT 274 (357)
T ss_pred --hHHHH-hhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCC--CCCCCHHHHHHHHHHhCC----HHHHHHH
Confidence 11112 22578999999999999999999999999999999887643 456889999999998874 6788888
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
++.++++++.+.+.|+.. . .+.+|+|+|++++ +..++.+.|.+ .||.+.||..|+.++++
T Consensus 275 ~~~~~~~r~~l~~~L~~~-~----~~~~g~f~~~~~~--------------~~~~~~~~l~~-~gv~v~~g~~f~~~~~i 334 (357)
T PRK14809 275 VETARWAREYIREELDAP-T----WESAGNFVLAEVG--------------DASAVAEAAQE-RGVIVRDCTSFGLPECI 334 (357)
T ss_pred HHHHHHHHHHHHHHhcCc-c----CCCCCCEEEEECC--------------CHHHHHHHHHH-CCEEEEECccCCCCCeE
Confidence 999999999999998753 2 2577888999874 46688888765 59999999999888999
Q ss_pred EEEeecCHHHHHHHHHHHHHHHh
Q 018665 322 RISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~ 344 (352)
||+++. .+++++++++|+++++
T Consensus 335 Rls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 335 RITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred EEecCC-HHHHHHHHHHHHHHhc
Confidence 999874 6899999999999875
No 73
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.2e-41 Score=311.70 Aligned_cols=310 Identities=16% Similarity=0.157 Sum_probs=248.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcE--EEeCChHHHHHHHHHHh--cCCCCEEEecCCCCCChHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQI--LVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i--~~~~g~~~a~~~~~~~l--~~~~~~vl~~~~~~~~~~~~~ 77 (352)
.|++..|.+++| +++++++. +.+..+++++| ++|+|+++++..++.++ +++||+|++++|+|..+...+
T Consensus 64 ~Y~~~~G~~~lR------~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~ 137 (396)
T PRK09257 64 NYLPIEGLAAYR------QAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIF 137 (396)
T ss_pred CcCCCCCCHHHH------HHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHH
Confidence 599999999999 99999998 44444578877 99999999999998765 589999999999999999999
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+..|.+++.+++...+++++|++.+++.++ .+..++++++||||||.+++.+++++|+++|+++ |+++|+||+|.+
T Consensus 138 ~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~ 216 (396)
T PRK09257 138 EAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKER-GLIPFLDIAYQG 216 (396)
T ss_pred HHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEeccccc
Confidence 999999999998433457899999999875 2345666799999999999999999999999999 999999999999
Q ss_pred cccCC-CCccccccCCCCCCceEEEeccccccccccceeEEEEc---ChhH----HHHHHhhhhccccCCChHHHHHHHH
Q 018665 155 IIYAP-ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHF----VAACNKIQSQFTSGASSISQKAGVA 226 (352)
Q Consensus 155 ~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
+.++. ....++..+....+++++++||||.++++|+|+||+++ +++. +..+.........+++.+.|.++..
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 296 (396)
T PRK09257 217 FGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVAT 296 (396)
T ss_pred cccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHH
Confidence 87642 22334444433346899999999999988999999973 4443 3444343333344578889999999
Q ss_pred HhcccCC---ChHHHHHHHHHHHHHHHHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 227 ALGLGYA---GGEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 227 ~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
++..+.. ..+++++.++.++++++.+.+.|++.. ++.+..+++|+|+|++++ . +++++
T Consensus 297 ~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~---------------~-~~~~~ 360 (396)
T PRK09257 297 ILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT---------------P-EQVDR 360 (396)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC---------------H-HHHHH
Confidence 9876321 135577788999999999999999862 377778999999999864 2 45566
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHH
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGL 343 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~ 343 (352)
|+++.||.+.|. + ||+++. +++++++++++|++++
T Consensus 361 l~~~~~V~~~p~------~--ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 361 LREEFGVYAVGS------G--RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred HHHcCCEEEcCC------C--eEEEeeCCHHHHHHHHHHHHhhC
Confidence 777789999873 2 999985 9999999999998753
No 74
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=304.21 Aligned_cols=321 Identities=19% Similarity=0.253 Sum_probs=253.6
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCC---CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYT---PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~---~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~ 78 (352)
..|+++.|.+++| +.+++++.+...... .++|++|+|+++++..++.+++++||.|++++|+|..+...+.
T Consensus 38 ~~Y~~~~G~~~lr------~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~ 111 (388)
T PRK08637 38 FPYAPPQGIPELR------DLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFN 111 (388)
T ss_pred cCCCCCCCCHHHH------HHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH
Confidence 3589999999999 999999873332232 2689999999999999999999999999999999999998765
Q ss_pred -hcCCeEEEecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh-----CCCEEEEe
Q 018665 79 -IADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-----HPRLLVLS 148 (352)
Q Consensus 79 -~~g~~v~~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~-----~~~~~liv 148 (352)
..|.+++.+++.. +++++|++.+++.++ +...++++++||||||.+++.+++++|+++|++ + +++||+
T Consensus 112 ~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~-~~~iI~ 189 (388)
T PRK08637 112 TRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGT-KVVAVV 189 (388)
T ss_pred HhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCC-cEEEEe
Confidence 6899999999842 223589999998876 445567788999999999999999999999875 9 999999
Q ss_pred cccccccccCCCCcccc-ccCCCCCCce--EEEeccccccccccceeEEEEcC------hhHHHHHHhhh----hccccC
Q 018665 149 DEIYEHIIYAPATHTSF-ASLPGMWERT--LTVNGFSKAFAMTGWRLGYIAGP------KHFVAACNKIQ----SQFTSG 215 (352)
Q Consensus 149 D~~~~~~~~~~~~~~~~-~~~~~~~~~~--i~~~s~sK~~g~~g~~~g~l~~~------~~~~~~~~~~~----~~~~~~ 215 (352)
||+|.++.+++....++ ..+....+++ +.+.|+||.++++|+|+||++++ +++++.+.... .....+
T Consensus 190 De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 269 (388)
T PRK08637 190 DDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISN 269 (388)
T ss_pred cccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCC
Confidence 99999998877544443 2222334565 44569999998999999999854 57777765421 112346
Q ss_pred CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCC
Q 018665 216 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 292 (352)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
+|.+.|.++..+++.+.. ....++.+..++++++.+.+.|+.. +++.+.++++|+++|++++..
T Consensus 270 ~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~------------ 336 (388)
T PRK08637 270 GPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGV------------ 336 (388)
T ss_pred CCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChH------------
Confidence 899999999999976322 2334556667888888888888654 367888889999999999742
Q ss_pred ChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 293 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
++.++++.|.+++||.+.+. .++++||+++. +++++++++++|++++++++
T Consensus 337 ~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (388)
T PRK08637 337 DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDLR 388 (388)
T ss_pred HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhcC
Confidence 67889999876669988642 36789999998 88999999999999998653
No 75
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.5e-41 Score=307.19 Aligned_cols=269 Identities=23% Similarity=0.359 Sum_probs=232.4
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|++..|..++| +++|+++. ++|+.+++++|++|+|+++++..++.+++ ++||.|++++|+|..|...++.
T Consensus 101 ~~Y~~~~G~~~LR------~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~ 174 (407)
T PLN02368 101 GAYSDSRGLPGVR------KEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISL 174 (407)
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHH
Confidence 4699999999999 99999999 77988899999999999999999999987 6899999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
.|.+++.++++.+.+|.+|++.|++.+++ +++++++++||||||.+++.+++++|+++|+++ |++||+||+|.
T Consensus 175 ~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~-~~~II~DE~Y~ 253 (407)
T PLN02368 175 LGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQE-RLVLLGDEVYQ 253 (407)
T ss_pred cCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEcccc
Confidence 99999999998777789999999998863 689999999999999999999999999999999 99999999999
Q ss_pred ccccCCC-CccccccC----C---CCCCceEEEecccccc-ccccceeEEEE---cChhHHHHHHhhhhccccCCChHHH
Q 018665 154 HIIYAPA-THTSFASL----P---GMWERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQSQFTSGASSISQ 221 (352)
Q Consensus 154 ~~~~~~~-~~~~~~~~----~---~~~~~~i~~~s~sK~~-g~~g~~~g~l~---~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
++.|++. .+.++..+ . ...++++++.||||.+ |++|+|+||++ +++++++.+.+... ..+++|.+.|
T Consensus 254 ~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~~~~~~~Q 332 (407)
T PLN02368 254 QNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IALSPNVSGQ 332 (407)
T ss_pred ccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccCCCCcHHH
Confidence 9988764 33444332 1 1135899999999998 89999999999 48899999888643 3567899999
Q ss_pred HHHHHHhcccCCC----hHHH---HHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecC
Q 018665 222 KAGVAALGLGYAG----GEVV---SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 278 (352)
Q Consensus 222 ~~~~~~l~~~~~~----~~~~---~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~ 278 (352)
.++.+++...... ..+. +++.+.++++++.+.+.|++++|+.+..|+++||+|++++
T Consensus 333 ~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 333 IFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 9999999753210 1233 4567889999999999999999999999999999997654
No 76
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-41 Score=305.96 Aligned_cols=302 Identities=24% Similarity=0.327 Sum_probs=249.3
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
..|++..| .++| +.+|++++ +++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|
T Consensus 66 ~~Y~~~~g-~~lr------~~ia~~~~-----~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g 133 (371)
T PRK05166 66 RLYPDPQG-RALR------EAIAARTG-----VPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMG 133 (371)
T ss_pred hcCCCCcH-HHHH------HHHHHHhC-----cCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcC
Confidence 35776677 4899 99999986 678999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++. ++.+|++++++.++++++++++++||||||.++|.+++++|+++|+ . ++++|+||+|.++.+++.
T Consensus 134 ~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~-~-~~~ii~De~y~~~~~~~~- 208 (371)
T PRK05166 134 ARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATP-P-ETLIVVDEAYAEYAAGDD- 208 (371)
T ss_pred CeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-C-CcEEEEECcHHHhcCCcC-
Confidence 9999999863 4568999999999888899999999999999999999999999885 5 788999999998875432
Q ss_pred cccccc-CCCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
.++... .....+++++++||||.+|++|+|+||+++ ++++++.+.+... .+++|.+.|.++.+++.. .++++
T Consensus 209 ~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~--~~~~~~~~q~~~~~~l~~----~~~~~ 282 (371)
T PRK05166 209 YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT--PFNVNGAAQAAALAALDD----EEHLA 282 (371)
T ss_pred cccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc--CCCCCHHHHHHHHHHhcC----HHHHH
Confidence 223222 222246899999999999999999999875 6788888876543 345889999888888875 67888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+.++.++++++.+.+.|++. |+.+ .+.+|+|+|++++. +..++.+.|.++ ||.+.||..++.++
T Consensus 283 ~~~~~~~~~r~~l~~~L~~~-g~~~-~p~~g~fl~~~~~~-------------~~~~l~~~l~~~-gi~v~p~~~~~~~~ 346 (371)
T PRK05166 283 KGVALALAERERLKKELAEM-GYRI-APSRANFLFFDARR-------------PASAVAEALLRQ-GVIVKPWKQPGFET 346 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHC-cCee-CCCcCCEEEEeCCC-------------CHHHHHHHHHHC-CeEEecCCCCCCCC
Confidence 88899999999999999987 7775 45668889998753 577899998876 99999998766789
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHH
Q 018665 320 CIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
++||+++.+ ++.+++.+.|+.++
T Consensus 347 ~iRi~~~~~-~~~~~l~~~l~~i~ 369 (371)
T PRK05166 347 FIRVSIGSP-EENDHFVAALDKVL 369 (371)
T ss_pred eEEEEcCCH-HHHHHHHHHHHHHh
Confidence 999999973 44555555555443
No 77
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.4e-41 Score=299.47 Aligned_cols=295 Identities=17% Similarity=0.257 Sum_probs=238.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
+.| |++...++| +++|++++ +.+++|++|+|+++++..++. +.+++ .|++++|+|..|...++..|
T Consensus 35 ~~Y-p~~~~~~lr------~~ia~~~~-----~~~~~I~it~Gs~~~l~~~~~-~~~~~-~vv~~~P~y~~y~~~~~~~G 100 (332)
T PRK06425 35 SIY-PEISYTDIE------DQIKIYTQ-----GLKIKVLIGPGLTHFIYRLLS-YINVG-NIIIVEPNFNEYKGYAFTHG 100 (332)
T ss_pred ccC-cCcCHHHHH------HHHHHHhC-----CCcceEEECCCHHHHHHHHHH-HhCCC-cEEEeCCChHHHHHHHHHcC
Confidence 345 677789999 99999998 788999999999999998887 45665 68888999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.+|++. +..|.+.+++ .+++++++++||||||.+++.+++++|+++|+++ +++||+||+|.++.+++
T Consensus 101 ~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~DE~Y~~~~~~~-- 171 (332)
T PRK06425 101 IRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKK-GALLFIDEAFIDFVPNR-- 171 (332)
T ss_pred CeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHc-CCEEEEecchhcccccc--
Confidence 9999999863 2346555543 3788999999999999999999999999999999 99999999999987643
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..+.......++++++++||||.+|++|+|+||+++++++++.+.+....+ ..+.+.+.+ +.... ...+.++.
T Consensus 172 ~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~--~~~~~~~~~----l~~~~-~~~~~~~~ 244 (332)
T PRK06425 172 AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPW--SVCDPAIDF----IRSID-LDYVAKHS 244 (332)
T ss_pred chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCC--ccCHHHHHH----HHHhh-hHHHHHHH
Confidence 223334433457999999999999999999999999999999988765433 244443322 22211 14556778
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DT 319 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~ 319 (352)
++.++++++.+.+.|+++ |+.+..+..|+|+|++++ ++.++.+.|.++ ||.+.||..|+. ++
T Consensus 245 ~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~--------------~~~~~~~~l~~~-gi~v~~~~~f~~~~~~ 308 (332)
T PRK06425 245 LDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--------------DAHDFYSYLLKN-GILVRLLDDYECLGEQ 308 (332)
T ss_pred HHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC--------------CHHHHHHHHHHC-CeEEEECCCCCCCCCC
Confidence 889999999999999988 888765567788999875 467888998875 999999988853 47
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHH
Q 018665 320 CIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
++||+++.+ ++.+++++.|++++
T Consensus 309 ~iRis~~~~-~~~~~l~~al~~~~ 331 (332)
T PRK06425 309 YIRIAIRRR-SFNIKLVNALRNFL 331 (332)
T ss_pred EEEEEeCCH-HHHHHHHHHHHHHh
Confidence 999999974 68899999998765
No 78
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.8e-41 Score=303.88 Aligned_cols=297 Identities=23% Similarity=0.276 Sum_probs=247.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
+| |+.+..++| +++|++++ +++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|.
T Consensus 82 ~Y-p~~~~~~lr------~~ia~~~~-----~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~ 149 (380)
T PLN03026 82 VY-PDPESRRLR------AALAEDSG-----LESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGA 149 (380)
T ss_pred cC-CCCCHHHHH------HHHHHHhC-----cChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCC
Confidence 35 566788999 99999997 7889999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhc-cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+++.++.+ .++.+|++++++.+ +++++++++++||||||.+++.+++++|++ . .+++|+||+|.++.+.+..
T Consensus 150 ~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~----~-~~~vi~DeaY~~~~~~~~~ 222 (380)
T PLN03026 150 EVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILE----L-PILVVLDEAYIEFSTQESR 222 (380)
T ss_pred EEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHh----c-CCEEEEECcchhhcCCcch
Confidence 99999885 45678999999998 678999999999999999999666655553 3 3799999999987654321
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
......++++++++||||.+|++|+|+||+++++++++.+.+.... ++.+.+.|.++.++++. .+++++.
T Consensus 223 ----~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~aL~~----~~~~~~~ 292 (380)
T PLN03026 223 ----MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALSN----PKYLEDV 292 (380)
T ss_pred ----HHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhhC----HHHHHHH
Confidence 1111235789999999999999999999999999999998876654 45889999999999975 6788889
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
++.++++++.+.+.|++++++.+ .+.+++|+|++++... ++.++++.|.++ ||.+.++...+.++++
T Consensus 293 ~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~-----------~~~~~~~~l~~~-gI~v~~~~~~~~~~~l 359 (380)
T PLN03026 293 KNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSGR-----------DAKKLKEDLAKM-GVMVRHYNSKELKGYI 359 (380)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCCC-----------CHHHHHHHHHHC-CeEEEECCCCCCCCEE
Confidence 99999999999999998844554 5778889999987531 678899998854 9999998765567899
Q ss_pred EEEeecCHHHHHHHHHHHHHH
Q 018665 322 RISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~ 342 (352)
||+++. .++.+++++.|++.
T Consensus 360 Ris~~~-~~~~~~l~~al~~~ 379 (380)
T PLN03026 360 RVSVGK-PEHTDALMEALKQL 379 (380)
T ss_pred EEecCC-HHHHHHHHHHHHHh
Confidence 999995 46777777777653
No 79
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=9.9e-41 Score=325.27 Aligned_cols=328 Identities=20% Similarity=0.245 Sum_probs=261.5
Q ss_pred CCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 8 QGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
.+.++++ +++++++. ++|++.++ ++|++++|+++++..++.+++++||.|+++.|+|..|...++..|.+++
T Consensus 730 ~g~pdlr------~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv 803 (1082)
T PLN02672 730 ESETDPR------PSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFR 803 (1082)
T ss_pred CCChHHH------HHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEE
Confidence 4566778 99999999 78988765 6899999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCcccCHHHHHhhccC-CeeEEEEcCCC-CCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc-
Q 018665 86 ILPTRISENFLLDPKVLESKLTE-KSRLLILCSPS-NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH- 162 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~-nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~- 162 (352)
.++++.++++.+|++++++++++ ..+++++++|+ ||||.+++.+++++|+++|+++ |++||+||+|+++.|++...
T Consensus 804 ~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~-di~VIsDEaYsdL~Fd~~~~s 882 (1082)
T PLN02672 804 RIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKY-GARVIIDTSFSGLEYDTSGWG 882 (1082)
T ss_pred EEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHc-CCEEEEeCCCCccccCCCCCc
Confidence 99997667889999999999975 45688999997 9999999999999999999999 99999999999888865421
Q ss_pred -cccc----cCCC--CCCceEEEeccccccccccceeEEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhc---c-
Q 018665 163 -TSFA----SLPG--MWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALG---L- 230 (352)
Q Consensus 163 -~~~~----~~~~--~~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~- 230 (352)
.++. .... ..+++++++|+||.++++|+|+||+++++ .+++.+....... .++...+.++.+++. .
T Consensus 883 ~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s--~~~~~~q~Aaaaalall~~~ 960 (1082)
T PLN02672 883 GWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLS--RPHSTLKYTIKKLLGLKNQK 960 (1082)
T ss_pred ccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhc--CCCcHHHHHHHHHHHHHhcc
Confidence 1111 1111 12478999999999999999999999865 4888887653322 233344444444442 1
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcc--cCC---C-CCCChHHHHHHHHHc
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA--EGF---G-KIENSESLCRYLLDK 304 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~--~~~---~-~~~~~~~~~~~l~~~ 304 (352)
......++.+.++.++++++++.+.|++. |+.+..|++|+++|++++...+... +.. . -..+..+++++|+++
T Consensus 961 ~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee 1039 (1082)
T PLN02672 961 SSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKS 1039 (1082)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHc
Confidence 11013456777888999999999999998 8999999999999998753221000 000 0 002678899999988
Q ss_pred cCEEeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 305 AQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 305 ~gi~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
.||.+.||..|+.++++||+++.+++++++++++|+++.+-
T Consensus 1040 ~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1040 TGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred CCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 89999999988888999999999989999999999997653
No 80
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-40 Score=301.58 Aligned_cols=304 Identities=22% Similarity=0.352 Sum_probs=248.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|+ +++..++| +++|++++ +++++|++++|+++++..++.+++.+| +.|++++|+|..+...++..|
T Consensus 55 ~Y~-~~~~~~lr------~~ia~~~~-----~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g 122 (364)
T PRK04781 55 RYP-DPQPPGLR------SALAALYG-----CAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQN 122 (364)
T ss_pred cCC-CCCHHHHH------HHHHHHhC-----cChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcC
Confidence 453 44578899 99999996 788999999999999999999998888 799999999998888889999
Q ss_pred CeEEEecccC-CCCcccCHHHHHhhc-cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 82 ATPVILPTRI-SENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 82 ~~v~~i~~~~-~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.+++.++++. ++++.+|++++++.+ .++++++++++||||||.+++.+++++++++|+ . ++++|+||+|.++.+..
T Consensus 123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~-~~~iI~Deay~~f~~~~ 200 (364)
T PRK04781 123 APLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQ-G-KALVVVDEAYGEFSDVP 200 (364)
T ss_pred CEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-C-CcEEEEeCcchhhcCCc
Confidence 9999999853 345678999886654 568899999999999999999999999998874 5 78999999999876422
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
+........+++++++||||.+|++|+|+||+++++++++.+.+.... ++.+.+.|.++..+++++. ..+..
T Consensus 201 ----~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~--~~~~~ 272 (364)
T PRK04781 201 ----SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAP--YPVPTPCAALAEQALSAPA--LAVTA 272 (364)
T ss_pred ----chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCC--CCCCHHHHHHHHHHHhccc--HHHHH
Confidence 222222335789999999999999999999999999999999887654 4588888998888887621 24566
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC-CCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF-GDD 318 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~-~~~ 318 (352)
+..+.++++++.+.+.|+.++++....|++|+|+|++++ +..++.+.|.++ ||.+.+|..| +.+
T Consensus 273 ~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--------------~~~~~~~~l~~~-gI~v~~~~~~~~~~ 337 (364)
T PRK04781 273 RRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--------------DAEAAFQALLAA-GVVVRDQRAAPRLS 337 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--------------CHHHHHHHHHHC-CeEEeeCCCCCCCC
Confidence 666778999999999999887775456788999999986 456788887754 9999998764 346
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
+++||+++. .++.+++++.|++...
T Consensus 338 ~~~Ris~~~-~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 338 DALRITLGT-PEQNDRVLAALQRTQA 362 (364)
T ss_pred CeEEEeCCC-HHHHHHHHHHHHHHHh
Confidence 799999987 4677788888876543
No 81
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-41 Score=303.01 Aligned_cols=303 Identities=25% Similarity=0.361 Sum_probs=250.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..| |+.|..++| +.+|+++. ++|+++++++|++|+|+++++..++.+++++||.|+++.|+|..+...++..
T Consensus 60 ~~Y-~~~g~~~lr------~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~ 132 (368)
T PRK03317 60 NRY-PDRDAVALR------ADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGT 132 (368)
T ss_pred ccC-CCCchHHHH------HHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhc
Confidence 346 567889999 99999999 7788899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
|.+++.++.. .++++|++.++++++ ++++++++++|+||||.+++.+ ++.++++.+ ++++|+||+|+++.+.+
T Consensus 133 g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~---~l~~l~~~~-~~~lI~DE~y~~~~~~~ 206 (368)
T PRK03317 133 HTEWVEGPRA--ADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLD---DVEAILDAA-PGIVVVDEAYAEFRRSG 206 (368)
T ss_pred CCeeEEcccC--CCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHH---HHHHHHHHC-CceEEEeCCchhhcccC
Confidence 9998888764 456799999999986 4788899999999999999955 555555566 78999999999987655
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
. .+........+++++++||||.+|++|+|+||+++++++++.+..... .++.|++.+.++.++++. .+...
T Consensus 207 ~--~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~--~~~~s~~~~~a~~~~l~~----~~~~~ 278 (368)
T PRK03317 207 T--PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRL--PYHLSAVTQAAARAALRH----ADELL 278 (368)
T ss_pred C--cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCC--CCCCCHHHHHHHHHHhhC----HHHHH
Confidence 3 222222222468899999999999899999999999999999886653 456889999999999975 34455
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+.+++++++++.+.+.|++. |+.+..+.+++++|.+++ +...+.+.|.++ ||.+.+. +.++
T Consensus 279 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~-Gv~v~~~---~~~~ 339 (368)
T PRK03317 279 ASVAALRAERDRVVAWLREL-GLRVAPSDANFVLFGRFA--------------DRHAVWQGLLDR-GVLIRDV---GIPG 339 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEeccC--------------CHHHHHHHHHHC-CEEEEeC---CCCC
Confidence 56677888899999999987 888888888887776553 567888888865 9999864 3478
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 320 CIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
++|++++. .++++++++.|++++..
T Consensus 340 ~iRi~~~~-~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 340 WLRVTIGT-PEENDAFLAALAEVLAT 364 (368)
T ss_pred eEEEecCC-HHHHHHHHHHHHHHHHH
Confidence 99999874 57899999999988754
No 82
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-41 Score=304.95 Aligned_cols=295 Identities=22% Similarity=0.381 Sum_probs=246.5
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHHhcCCeE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATP 84 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~~~g~~v 84 (352)
|+....+++ +.++++++ +++++|++|+|+++++..++.+++++| ++|+++.|+|..|...++..|.++
T Consensus 55 p~~~~~~l~------~~~a~~~g-----~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~ 123 (351)
T PRK01688 55 PECQPKAVI------ENYAAYAG-----VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEI 123 (351)
T ss_pred CCCChHHHH------HHHHHHhC-----CCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEE
Confidence 666667888 99999987 789999999999999999999998886 899999999999999999999999
Q ss_pred EEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 85 VILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 85 ~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
+.++++ .++.+|++++++++ ++++++++++||||||..++.+++++|++.|++ ++++|+||+|.+|... .+
T Consensus 124 ~~v~~~--~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~--~~~vivDEay~~f~~~----~s 194 (351)
T PRK01688 124 RTVPTL--DNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG--KAIVVADEAYIEFCPQ----AS 194 (351)
T ss_pred EEeecC--CCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC--CcEEEEECchhhcCCC----CC
Confidence 999986 35779999999988 588999999999999999999999999988864 5689999999987522 23
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
...+...++++++++||||.+|++|+|+||+++++++++.+.+....+ +.+.+.+.++.++++.. ..+++++.++.
T Consensus 195 ~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~--~v~~~~~~~a~~~L~~~--~~~~~~~~~~~ 270 (351)
T PRK01688 195 LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY--PLSTPVADIAAQALSPQ--GIAAMRERVAE 270 (351)
T ss_pred hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC--CCCHHHHHHHHHHHhcc--hHHHHHHHHHH
Confidence 223223367999999999999999999999999999999988765544 47778888888888741 13577888888
Q ss_pred HHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC-CCCCeEEE
Q 018665 245 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF-GDDTCIRI 323 (352)
Q Consensus 245 ~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~-~~~~~iRi 323 (352)
++++++++.+.|++++++..+.++.++|+|++++ ++.++.+.|.++ ||.++++..+ +.++++||
T Consensus 271 ~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~--------------~~~~l~~~L~~~-gi~vr~~~~~~~~~~~iRi 335 (351)
T PRK01688 271 INANRQWLIAALKEIPCVEQVFDSETNYILARFT--------------ASSAVFKSLWDQ-GIILRDQNKQPGLSNCLRI 335 (351)
T ss_pred HHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--------------CHHHHHHHHHHC-CeEEEECCCcCCCCCeEEE
Confidence 8999999999999887776555778888998875 567888998865 9999877654 45789999
Q ss_pred EeecCHHHHHHHHHHHH
Q 018665 324 SYAASLTTLQAAVERIK 340 (352)
Q Consensus 324 ~~~~~~~~l~~~~~~l~ 340 (352)
+++. .++.+++++.|+
T Consensus 336 s~~~-~~e~~~l~~al~ 351 (351)
T PRK01688 336 TIGT-REECQRVIDALR 351 (351)
T ss_pred eCCC-HHHHHHHHHhhC
Confidence 9985 688899988763
No 83
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=294.83 Aligned_cols=301 Identities=26% Similarity=0.394 Sum_probs=258.5
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCe
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
.+|++...+++ ++++++++ ..++++|++++|+++.+..++++++.+||+|+++.|+|..|...++..|.+
T Consensus 53 rYPd~~~~~l~------~a~a~~~~----~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~ 122 (356)
T COG0079 53 RYPDPDYRELR------AALAEYYG----VVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAE 122 (356)
T ss_pred cCCCCcHHHHH------HHHHHHhC----CCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCe
Confidence 34677888999 99999986 145689999999999999999999999999999999999999999999999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.++..+ +..|++.+.+.+++++++|++||||||||..++.++++++++.+.+ +.++|+||+|.+|.- .
T Consensus 123 ~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~--~~~vVvDEAY~eF~~-----~ 192 (356)
T COG0079 123 VVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPE--GGLVVIDEAYIEFSP-----E 192 (356)
T ss_pred EEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC--CcEEEEeCchhhcCC-----c
Confidence 99999874 7799999999998899999999999999999998888888876654 589999999999753 2
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+...+...++|++++.||||++|++|+|+||+++++++++.+++....|+ .|.+++.++.+++++ .+++++...
T Consensus 193 ~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~~--v~~~a~~aa~aal~~----~~~~~~~~~ 266 (356)
T COG0079 193 SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPFN--VSSPALAAAIAALRD----ADYLEESVE 266 (356)
T ss_pred hhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHccc----HHHHHHHHH
Confidence 22222224678999999999999999999999999999999999887765 999999999999997 688999999
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC-CCCCeEE
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF-GDDTCIR 322 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~-~~~~~iR 322 (352)
.++..++++.+.|+++ ++..+.|+.++|++++++.. .+..+.+.|.++ ||.++..... ..++++|
T Consensus 267 ~~~~~r~rl~~~l~~~-~~~~v~pS~aNFvlv~~~~~------------~~~~l~~~L~~~-giivR~~~~~~~~~~~lR 332 (356)
T COG0079 267 RIREERERLYAALKAL-GLFGVFPSQANFVLVRVPDA------------EAAALAEALLKK-GILVRDCSSVGLLPGYLR 332 (356)
T ss_pred HHHHHHHHHHHHHHhC-CCCeecCCCCcEEEEECCCc------------cHHHHHHHHHHC-CEEEEeCCCCCCCCCeEE
Confidence 9999999999999998 45534566688899998752 355788998877 9999998652 2467999
Q ss_pred EEeecCHHHHHHHHHHHHHHHhh
Q 018665 323 ISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 323 i~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
|++...+|. +++++.|++++..
T Consensus 333 itvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 333 ITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred EEeCCHHHH-HHHHHHHHHHHhc
Confidence 999997666 9999999988764
No 84
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2.1e-40 Score=299.73 Aligned_cols=297 Identities=20% Similarity=0.284 Sum_probs=239.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
..|++ .+..++| +++|++++ +++++|++|+|+++++..++.++. +++.|++++|+|..+...++..|
T Consensus 52 ~~Y~~-~~~~~Lr------~aia~~~~-----v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g 118 (360)
T PRK07392 52 RHYPD-PDYRELR------LALAQHHQ-----LPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRALRAFG 118 (360)
T ss_pred hcCCC-cCHHHHH------HHHHHHhC-----cChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHHHcC
Confidence 34754 4567899 99999995 788999999999999999998875 57899999999999999999999
Q ss_pred CeEEEecccCCCCc---ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 82 ATPVILPTRISENF---LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 82 ~~v~~i~~~~~~~~---~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
.+++.++++.++++ ..+++++++.. ++++++++++||||||.+++ .++|.++++++ ++ +|+||+|.++.++
T Consensus 119 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~---~~~l~~l~~~~-~~-~IiDE~y~~~~~~ 192 (360)
T PRK07392 119 ATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWS---REAILPLLEQF-AL-VVVDEAFMDFLPP 192 (360)
T ss_pred CeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcC---HHHHHHHHHHC-CE-EEEECchhhhccC
Confidence 99999999765543 35677776654 36789999999999999999 55666677789 86 5569999998776
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
+. ..++.......+++++++||||.+|++|+|+||+++++++++.+..... .+++|.+.|.++.++++. ..+.
T Consensus 193 ~~-~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~----~~~~ 265 (360)
T PRK07392 193 DA-EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD--PWPVNGLAAAAAIAALAD----RDFQ 265 (360)
T ss_pred cc-ccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC--CCCCCHHHHHHHHHHhcc----HHHH
Confidence 53 2333222233578999999999999999999999999999988876543 356899999999999975 5677
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC-
Q 018665 239 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD- 317 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~- 317 (352)
+..++.++++++.+.+.|++++++.+. +.+++|+|++++. ++.++++.+++++||.+.||..|+.
T Consensus 266 ~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~-------------~~~~l~~~ll~~~gv~v~pg~~f~~~ 331 (360)
T PRK07392 266 QQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG-------------SALQLQEKLLQQHRILIRDCLSFPEL 331 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC-------------CHHHHHHHHHhhCCEEEEeCCCCCCC
Confidence 777788899999999999988888775 4778899998763 5678888877667999999998864
Q ss_pred -CCeEEEEeecCH--HHHHHHHHH
Q 018665 318 -DTCIRISYAASL--TTLQAAVER 338 (352)
Q Consensus 318 -~~~iRi~~~~~~--~~l~~~~~~ 338 (352)
++++||+++.++ +.+.+++++
T Consensus 332 ~~~~iRi~~~~~~~~~~l~~al~~ 355 (360)
T PRK07392 332 GDRYFRVAVRTEAENQRLLEALAA 355 (360)
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 579999999843 455555544
No 85
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-40 Score=299.70 Aligned_cols=304 Identities=22% Similarity=0.283 Sum_probs=254.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++ +..++| +++|++++ +++++|++++|+++++..++.+++++||.|+++.|+|+.+...++..|.
T Consensus 63 ~Y~~~-~~~~Lr------~~ia~~~~-----~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~ 130 (369)
T PRK08153 63 KYGDP-ENHDLR------HALAAHHG-----VAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGG 130 (369)
T ss_pred cCCCC-ccHHHH------HHHHHHhC-----CCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCC
Confidence 46544 588999 99999986 7889999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+++.+|.+.+ ..|++++.+.+. ++++++++++|+||||.++|.+++++|+++|+ + ++++|+||+|..+.+.+..
T Consensus 131 ~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~-~-~~~lI~DE~y~~~~~~~~~ 205 (369)
T PRK08153 131 RLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALP-E-TTLLVLDEAYCETAPAGAA 205 (369)
T ss_pred eEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-C-CcEEEEeCchhhhcCcccc
Confidence 9999998533 378999887764 67899999999999999999999999999876 6 8899999999988765421
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.++ ....+++++++||||.+|++|+|+||+++++++++.+...... +++|++.|.++.+++++ .+++++.
T Consensus 206 -~~~---~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~~----~~~~~~~ 275 (369)
T PRK08153 206 -PPI---DTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH--FGMNRIAQAAALAALKD----QAYLAEV 275 (369)
T ss_pred -hhh---hhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC--CCCCHHHHHHHHHHhcC----HHHHHHH
Confidence 222 2235689999999999999999999999999999988876644 56899999999999974 6788889
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec-cCCCCCCCCe
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV-PGDAFGDDTC 320 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~-~g~~~~~~~~ 320 (352)
++.++++++.+.+.|++. |+.+. +.+++|+|++++... ..+.++.++|.++ ||.+. |+.. ..+++
T Consensus 276 ~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~~----------~~a~~l~~~l~~~-Gi~v~~p~~~-~~~~~ 341 (369)
T PRK08153 276 VGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRDG----------AFARAVLDGLIAR-DIFVRMPGVA-PLDRC 341 (369)
T ss_pred HHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCCc----------ccHHHHHHHHHHC-CeEEeeCCCC-CCCCe
Confidence 999999999999999876 77654 678888999875310 1577888888875 99995 6542 23579
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 321 IRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+||+++ ++++++++++.|++++...++
T Consensus 342 iRis~~-~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 342 IRVSCG-PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred EEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence 999999 578999999999999987655
No 86
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.1e-40 Score=301.01 Aligned_cols=305 Identities=23% Similarity=0.385 Sum_probs=255.9
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
..|++ ....++| +.+|++++ +++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|
T Consensus 62 ~~y~~-~~~~~lr------~~ia~~~~-----~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g 129 (367)
T PRK02731 62 HRYPD-GSGFELK------AALAEKFG-----VDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVG 129 (367)
T ss_pred cCCCC-CcHHHHH------HHHHHHhC-----cCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcC
Confidence 34643 3457899 99999996 678899999999999999999999999999999999998888889999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++.+ ++.+|++.+++.+++++++|++++|+||||.++|.++++++++.|+ + |+++|+||+|.++.+.+..
T Consensus 130 ~~~~~~~~~---~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~-~~~li~De~y~~~~~~~~~ 204 (367)
T PRK02731 130 AKPVEVPAK---DYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVP-P-DVLVVLDEAYAEYVRRKDY 204 (367)
T ss_pred CeEEEeccc---CCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC-C-CcEEEEECcHHHhccCcCc
Confidence 999999873 4568999999999888999999999999999999888888888774 7 8999999999987765433
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..++... ...+++++++|+||.+|++|+|+||+++++++++.+.+.... +..+.+.|.++.++++. .++.++.
T Consensus 205 ~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~----~~~~~~~ 277 (367)
T PRK02731 205 EDGLELV-AKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQP--FNVNSLALAAAVAALDD----DAFVEKS 277 (367)
T ss_pred ccHHHHH-hhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCC--CCCCHHHHHHHHHHhCC----HHHHHHH
Confidence 3333222 224788999999999998999999999999999988876543 45788999999999975 6778888
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
++.++++++.+.+.|++. |+.+. +..|+++|++++... ++.++++.|.++ ||.+.++..|+.++++
T Consensus 278 ~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~-----------~~~~~~~~L~~~-gI~v~~~~~~~~~~~i 343 (367)
T PRK02731 278 RALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK-----------DAAEAYQALLKR-GVIVRPVAGYGLPNAL 343 (367)
T ss_pred HHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC-----------CHHHHHHHHHHC-CEEEEeCCCCCCCCeE
Confidence 999999999999999988 87776 456788999986532 788999998865 9999999877667899
Q ss_pred EEEeecCHHHHHHHHHHHHHHHhh
Q 018665 322 RISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
|++++. .++++++++.|+++++.
T Consensus 344 Ris~~~-~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 344 RITIGT-EEENRRFLAALKEFLAA 366 (367)
T ss_pred EEecCC-HHHHHHHHHHHHHHHhc
Confidence 999984 68899999999988753
No 87
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=280.70 Aligned_cols=331 Identities=23% Similarity=0.364 Sum_probs=283.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH--hcC-CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH-
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK--ENG-LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR- 78 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~--~~~-~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~- 78 (352)
-|..-+|.+.+| +++|+++. +.+ ...+++++.+++|+|++++.+...|+++|+.-|+|.|.|+++..-++
T Consensus 116 ~fqdy~Gl~~fr------qa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~ 189 (471)
T KOG0256|consen 116 MFQDYHGLPSFR------QAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRW 189 (471)
T ss_pred hcccccCchHHH------HHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCccccccee
Confidence 366778999999 99999999 333 34688999999999999999999999999999999999999986555
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhcc------CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLT------EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
+.|++++++.....++++++.+.||+++. .+++.++++||+||-|..++++++..++++|.++ |+-+|+||+|
T Consensus 190 rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k-niHvI~DEIy 268 (471)
T KOG0256|consen 190 RTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK-NIHVISDEIY 268 (471)
T ss_pred ccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc-ceEEEeehhh
Confidence 78999999999988899999999999884 3788999999999999999999999999999999 9999999999
Q ss_pred cccccCCCCccccccCCC----CCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHH
Q 018665 153 EHIIYAPATHTSFASLPG----MWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAA 227 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (352)
++..|+.....|+.++.. +.+++-++.|+||.+|+||+|+|.+.. ++.++....++..+. ..|+..|..++..
T Consensus 269 a~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~--~vSs~tQ~~la~L 346 (471)
T KOG0256|consen 269 AGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFG--LVSSQTQYLLASL 346 (471)
T ss_pred cccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhcc--CCcHHHHHHHHHH
Confidence 998888776666665432 357889999999999999999999985 566777777776654 4899999999999
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
|++.+..+.++++..++++.+.+++.+.|+++ |+.++...+|.|+|+++.....+... +...++.+.+.++-++
T Consensus 347 LSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~lL~s~tf-----e~El~Lw~~i~~~vkl 420 (471)
T KOG0256|consen 347 LSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKLLTSLTF-----EGELELWERILDNVKL 420 (471)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHHhcCcCCh-----HHHHHHHHHHHHhhcc
Confidence 99866557778899999999999999999999 99999999999999998765432211 1345788888887789
Q ss_pred EeccCCCCC--CCCeEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 308 ALVPGDAFG--DDTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 308 ~i~~g~~~~--~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+.||+.|. .+||+|++++. .++.++-++++|+..+.....
T Consensus 421 nlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~~ 464 (471)
T KOG0256|consen 421 NLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQVQ 464 (471)
T ss_pred ccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhhc
Confidence 999999875 58999999999 656666699999999975443
No 88
>PLN02397 aspartate transaminase
Probab=100.00 E-value=3e-40 Score=303.53 Aligned_cols=310 Identities=16% Similarity=0.141 Sum_probs=240.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEE--eCChHHH--HHHHHHHhcCCCCEEEecCCCCCChHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILV--SNGAKQS--ILQAVLAVCSPGDEVIIPAPFWVSYPEMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~--~~g~~~a--~~~~~~~l~~~~~~vl~~~~~~~~~~~~~ 77 (352)
.|++..|.+++| +++++++. +......+++|.. +.+++++ +...+..++.+||+|++++|+|..|...+
T Consensus 86 ~Y~~~~G~~~LR------~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~ 159 (423)
T PLN02397 86 EYLPIEGLAEFN------KLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIF 159 (423)
T ss_pred CCCCcCCCHHHH------HHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHH
Confidence 599999999999 99999997 4332333334321 2333333 43444455569999999999999999999
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+..|.+++.+++...+++.+|++.+++.++ ++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.+
T Consensus 160 ~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~-~~~vI~De~Y~~ 238 (423)
T PLN02397 160 RDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSK-NHLPFFDSAYQG 238 (423)
T ss_pred HHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEecccCC
Confidence 999999999998433457799998887774 4678888899999999999999999999999999 999999999999
Q ss_pred cccCCC--CccccccCCCCCCceEEEeccccccccccceeEEEE--c-ChhHHHH----HHhhhhccccCCChHHHHHHH
Q 018665 155 IIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA--G-PKHFVAA----CNKIQSQFTSGASSISQKAGV 225 (352)
Q Consensus 155 ~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~--~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 225 (352)
+.+++. ...+........++++++.||||.++++|+|+||++ + ++++++. +.........+++.+.|.++.
T Consensus 239 l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 318 (423)
T PLN02397 239 FASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVA 318 (423)
T ss_pred ccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHH
Confidence 987541 223333333223579999999999999999999985 4 5555443 334443444567888999988
Q ss_pred HHhcccCCChHH---HHHHHHHHHHHHHHHHHHhcccCC----ceecCCCCceEEEeecCCccCCcccCCCCCCChHHHH
Q 018665 226 AALGLGYAGGEV---VSKMVKAFRERRDFLVKSFGELEG----VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 226 ~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
.+++.+.....+ +++.++.++++++.+.+.|+++ + +.+..|++|+|+|++++ .+++
T Consensus 319 ~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l~----------------~~~~ 381 (423)
T PLN02397 319 TILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGLN----------------KEQV 381 (423)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCCC----------------HHHH
Confidence 888762111133 6778889999999999999987 5 77788999999999863 3588
Q ss_pred HHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHh
Q 018665 299 RYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~ 344 (352)
++|++++||.+.++ + |++++. +.+.+++++++|+++++
T Consensus 382 ~~Ll~~~~V~v~~~------~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 382 DRMTKEYHIYMTRD------G--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHhCCEEECCC------C--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 99998999999743 2 999984 88999999999999985
No 89
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.6e-40 Score=295.50 Aligned_cols=301 Identities=19% Similarity=0.247 Sum_probs=246.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.| ++.+..++| +.+|++++ +++++|++|+|+++++..++.++ .+++ +++++|+|..+...++..|.
T Consensus 51 ~y-~~~~~~~lr------~~ia~~~~-----~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~ 116 (356)
T PRK08056 51 RY-PDVEYRHLH------QALARHHQ-----VPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGC 116 (356)
T ss_pred cC-cCccHHHHH------HHHHHHhC-----cChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCC
Confidence 45 445688999 99999986 78899999999999999998887 5564 78889999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++.+.++.+| +++++.++++++++++++||||||..++.+++++|+++|+++ ++++|+||+|.++.+.+...
T Consensus 117 ~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~ 194 (356)
T PRK08056 117 EIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSL-NIALILDEAFIDFIPDETGF 194 (356)
T ss_pred eEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhc-CCEEEEecchhccCCcchHH
Confidence 9999998765666666 455566677899999999999999999999999999999999 99999999999887644222
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.+. +. ..++++++.|+||.+|++|+|+||+++ ++++++.+..... .++++.+.+.++..+++. ..+.++.
T Consensus 195 ~~~--~~-~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~----~~~~~~~ 265 (356)
T PRK08056 195 IPQ--LA-DNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQM--PWSINAFAALAGEVILQD----RAYQQAT 265 (356)
T ss_pred HHH--hc-cCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--CCchhHHHHHHHHHHhCC----HHHHHHH
Confidence 222 11 246889999999999999999999998 4677777766443 345788888888888864 6778888
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DT 319 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~ 319 (352)
++.++++++.+.+.|++++++.+.+ ..++|+|++++. +..++++.|.++ ||.+.+|..|.. ++
T Consensus 266 ~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~l~~~-gI~v~~~~~f~~~~~~ 330 (356)
T PRK08056 266 WQWLAEEGARFYQALCALPLLTVWP-GRANYLFLRCER-------------PDIDLQRALLTQ-RILIRSCANYPGLDSR 330 (356)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEcC-CCCcEEEEEcCC-------------ChHHHHHHHHHC-CeEEEECCCCCCCCCC
Confidence 8999999999999999887877654 467889998874 456888888864 999999998743 46
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 320 CIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
++||+++. .++.+++++.|+++++
T Consensus 331 ~iRis~~~-~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 331 YYRVAIRS-AAENERLLAALRNVLT 354 (356)
T ss_pred EEEEEEcC-HHHHHHHHHHHHHHHc
Confidence 99999986 4677788888877653
No 90
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=5.9e-40 Score=296.84 Aligned_cols=294 Identities=20% Similarity=0.281 Sum_probs=245.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|++ .+..++| +.++++++ +++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.
T Consensus 74 ~Y~~-~~~~~Lr------~aia~~~~-----v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~ 141 (370)
T PRK09105 74 RYDL-ELEDDLR------TLFAAQEG-----LPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGA 141 (370)
T ss_pred CCCC-chHHHHH------HHHHHHhC-----cChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCC
Confidence 4644 4488899 99999986 7899999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++.+. ++.+|++++++. .++++++++++||||||.+++.++++++++.+ ++ ++++|+||+|.++.. .
T Consensus 142 ~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~-~~-~~~lIvDEaY~~f~~--~-- 212 (370)
T PRK09105 142 PVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANK-PA-GSVLLVDEAYIHFSD--A-- 212 (370)
T ss_pred eEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhC-CC-CcEEEEECchHHhcc--C--
Confidence 999999863 467899999877 45788999999999999999999999998865 57 899999999987642 1
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.+...+...+++++++.|+||.+|++|+|+||+++++++++.+... . ...++.+.+.++.+++.. .+++++.+
T Consensus 213 ~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~--~~~~~~~~~~aa~~~L~~----~~~~~~~~ 285 (370)
T PRK09105 213 PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-G--HNPLPVPAAAAGLASLRD----PKLVPQRR 285 (370)
T ss_pred cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-C--CCCcCHHHHHHHHHHHhC----HHHHHHHH
Confidence 2333333335789999999999999999999999999999988775 2 334888888888888875 67888999
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-CCCeE
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-DDTCI 321 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-~~~~i 321 (352)
+.++++++.+.+.|++. |+.+..+.++++ +++++. +..++++.|.++ ||.+ +..|. .++++
T Consensus 286 ~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~-~~~~~~-------------~~~~l~~~L~~~-gI~v--~~~~~~~~~~~ 347 (370)
T PRK09105 286 AENAAVREDTIAWLKKK-GYKCTPSQANCF-MVDVKR-------------PAKAVADAMAKQ-GVFI--GRSWPIWPNWV 347 (370)
T ss_pred HHHHHHHHHHHHHHHHC-CCCcCCCCCcEE-EEeCCC-------------CHHHHHHHHHHC-CcEE--ecCCCCCCCeE
Confidence 99999999999999987 888887777775 567652 678899999977 9988 33343 36899
Q ss_pred EEEeecCHHHHHHHHHHHHHHH
Q 018665 322 RISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~ 343 (352)
||+++. +++++++++.|++++
T Consensus 348 Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 348 RVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred EEEcCC-HHHHHHHHHHHHHHh
Confidence 999985 577889988888765
No 91
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.2e-40 Score=295.65 Aligned_cols=296 Identities=20% Similarity=0.318 Sum_probs=244.5
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.| ++.+..++| +++|++++ +++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.
T Consensus 56 ~y-~~~~~~~lr------~aia~~~~-----~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~ 123 (353)
T PRK05387 56 LY-PDPNADALR------QAIAAYYG-----LDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGI 123 (353)
T ss_pred cC-CCCcHHHHH------HHHHHHhC-----CCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCC
Confidence 46 455779999 99999996 7889999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++ .++.+|++.+++ ..+++++++||||||.++|.+++++|++++ + ++++|+||+|.++. +...
T Consensus 124 ~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~--~-~~~livDe~y~~~~--~~~~ 192 (353)
T PRK05387 124 PYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERILAAN--P-DSVVVIDEAYVDFG--GESA 192 (353)
T ss_pred EEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhC--C-CcEEEEeCcccccC--Ccch
Confidence 99999985 456789999874 457889999999999999988888877643 4 89999999998753 2211
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc-ccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.++ ....+++++++|+||.+|++|+|+||+++++++++.+....... .++.+.+.|.++.+++.. .+++++.
T Consensus 193 ~~~---~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~ 265 (353)
T PRK05387 193 IPL---IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIED----EAYFEET 265 (353)
T ss_pred HHH---HhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC----HHHHHHH
Confidence 222 12246889999999999999999999999999999988765443 456889999999898874 6778888
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
+++++++++.+.+.|+++ |+.+. +.+++++|+++++. ++.++++.|.++ ||.+.+......++++
T Consensus 266 ~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------~~~~~~~~l~~~-gi~v~~~~~~~~~~~i 330 (353)
T PRK05387 266 RAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSH------------DAAELAAKLRER-GIIVRHFNKPRIDQFL 330 (353)
T ss_pred HHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCC------------CHHHHHHHHHHC-CEEEEECCCCCCCCeE
Confidence 999999999999999988 77764 56677889988753 778999998765 9999754333346799
Q ss_pred EEEeecCHHHHHHHHHHHHHHHh
Q 018665 322 RISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~ 344 (352)
|++++ +.++++++++.|++++.
T Consensus 331 Ris~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 331 RITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred EEEeC-CHHHHHHHHHHHHHHhh
Confidence 99998 56899999999998764
No 92
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-39 Score=290.43 Aligned_cols=294 Identities=24% Similarity=0.420 Sum_probs=239.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+ +.+..++| +.+|++++ +++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.
T Consensus 55 ~y~-~~~~~~lr------~~ia~~~~-----~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~ 122 (351)
T PRK14807 55 IYP-DPTAEKLR------EELARYCS-----VVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGA 122 (351)
T ss_pred CCC-CccHHHHH------HHHHHHhC-----CCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCC
Confidence 354 44568899 99999986 7789999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+++.++++ .++.+|++.+++++++ +++++++++|+||||.+++ .+++.++|+++ +.++|+||+|.++. +..
T Consensus 123 ~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~---~~~l~~l~~~~-~~~~ivDe~y~~~~--~~~ 194 (351)
T PRK14807 123 VEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIE---REDIIKIIEKS-RGIVVVDEAYFEFY--GNT 194 (351)
T ss_pred eEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCC---HHHHHHHHHhC-CCEEEEeCcchhhc--ccc
Confidence 99999986 3466899999999974 8999999999999999999 55555556677 77899999998763 222
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..+. ....+++++++|+||.+|++|+|+||+++++++++.+...... +..+.+.|.++..+++. .++++.
T Consensus 195 ~~~~---~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~-----~~~~~~ 264 (351)
T PRK14807 195 IVDV---INEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP--YNINSLSQVIALKVLRT-----GVLKER 264 (351)
T ss_pred hHHH---hhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCC--CCcCHHHHHHHHHHHhH-----HHHHHH
Confidence 2222 1224789999999999999999999999999999998876543 45788999999999873 456777
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC-CCCCCe
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA-FGDDTC 320 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~-~~~~~~ 320 (352)
.+.++++++.+.+.|++++|+.+. +.+|+|+|++++ +..++.+.|.++ ||.+.++.. ++.+++
T Consensus 265 ~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~--------------~~~~~~~~l~~~-gV~v~~~~~~~~~~~~ 328 (351)
T PRK14807 265 VNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK--------------DADYVYQGLLER-GILVRDFSKVEGLEGA 328 (351)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC--------------CHHHHHHHHHHC-CEEEEECCCCCCCCCe
Confidence 778888899999999887788775 456778998885 566788888865 999987653 345689
Q ss_pred EEEEeecCHHHHHHHHHHHHHHH
Q 018665 321 IRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
+||+++.+ ++.+++++.|++++
T Consensus 329 iRis~~~~-~~~~~l~~~l~~~~ 350 (351)
T PRK14807 329 LRITVSSC-EANDYLINGLKELL 350 (351)
T ss_pred EEEEcCCH-HHHHHHHHHHHHhh
Confidence 99999874 66778888877653
No 93
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-39 Score=292.99 Aligned_cols=297 Identities=21% Similarity=0.328 Sum_probs=240.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~~~ 80 (352)
+.| |+.+..++| +++|++++ +++++|++|+|+++++..++.+++++| |+|+++.|+|..|...++..
T Consensus 55 ~~Y-p~~~~~~Lr------~aia~~~~-----~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~ 122 (354)
T PRK04635 55 NRY-PECQPPELI------NAYSAYAG-----VAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETF 122 (354)
T ss_pred ccC-CCCCHHHHH------HHHHHHhC-----cCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc
Confidence 345 445689999 99999987 889999999999999999999999888 89999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.+|++. ++.+|++.++. + +++++|++++||||||.++|.+++++|++.|+ ++++|+||+|.++...
T Consensus 123 g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~---~~~vivDeay~~~~~~-- 193 (354)
T PRK04635 123 NVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTP---DAIVVVDEAYIEFCPE-- 193 (354)
T ss_pred CCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC---CcEEEEeCchHhhccC--
Confidence 99999999863 46689888873 4 58899999999999999999777777766543 6899999999886522
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
.+...+...++++++++|+||.+|++|+|+||+++++++++.+..... .++.+.+.+.++.+++.+. ..+++++
T Consensus 194 --~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~~--~~~~~~~ 267 (354)
T PRK04635 194 --YSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIA--PYPVPLPVSEIATQALSEA--GLARMKF 267 (354)
T ss_pred --cchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcC--CCCCCHHHHHHHHHHHhcc--cHHHHHH
Confidence 233333334578999999999999999999999999999998876543 3457778888888888642 1355677
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCe
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 320 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~ 320 (352)
.++.++++++.+.+.|++++++.+.++ .|.|+|++++ +..++.+.|.+ .||.+..++....+++
T Consensus 268 ~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~--------------~~~~~~~~l~~-~gv~v~~~~~~~~~~~ 331 (354)
T PRK04635 268 QVLDLNAQGARLQAALSMYGGAKVLEG-NGNYVLAKFD--------------DVDAVFKALWD-AGIVARAYKDPRLANC 331 (354)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceECCC-CCcEEEEECC--------------CHHHHHHHHHH-CCEEEEECCCCCCCCe
Confidence 778889999999999998866777655 4667888875 45677777765 5999987654445789
Q ss_pred EEEEeecCHHHHHHHHHHHHHH
Q 018665 321 IRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
+||+++. .++++++++.|++.
T Consensus 332 lRis~~~-~e~~~~l~~al~~~ 352 (354)
T PRK04635 332 IRFSFSN-RAETDKLIGLIRNQ 352 (354)
T ss_pred EEEEeCC-HHHHHHHHHHHHHh
Confidence 9999874 68999999998764
No 94
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.2e-38 Score=285.07 Aligned_cols=285 Identities=16% Similarity=0.154 Sum_probs=234.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYT-PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.| |++. .+|| +.+|++++ +. +++|++|+|+++++..+.. ++++|+ |+++.|+|..|...++..|
T Consensus 50 ~Y-p~~~-~~L~------~~ia~~~~-----~~~~~~I~i~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g 114 (339)
T PRK06959 50 RL-PEDD-DGLA------ACAARYYG-----APDAAHVLPVAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFARHG 114 (339)
T ss_pred hC-CCch-HHHH------HHHHHHhC-----CCCcccEEECcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCC
Confidence 35 4444 8899 99999997 54 5899999999999986654 567665 8999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++.+. +.+ .+..+++++++||||||.+++.+++++|++.|+++ +.++|+||+|.++...
T Consensus 115 ~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~-~~~vI~DEay~~~~~~--- 178 (339)
T PRK06959 115 HRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPAARLLRWHAQLAAR-GGTLIVDEAFADTLPA--- 178 (339)
T ss_pred CEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEECCCccCCCc---
Confidence 9999887642 222 22456899999999999999999999999999998 8999999999987532
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.++..+. ..+++++++||||.+|++|+|+||+++++++++.+.+.... ++.|.+.|.++.+++++ .++.++.
T Consensus 179 -~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~--~~vs~~~q~a~~~~L~~----~~~~~~~ 250 (339)
T PRK06959 179 -ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGA--WTVSGPARHAVRAAFAD----AAWQAAM 250 (339)
T ss_pred -ccchhcc-CCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCc----HHHHHHH
Confidence 3444433 25789999999999999999999999999999999887654 44789999999999985 6778888
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
++.++++++.+.+.|+++ |+.+. ..++|+|++++ ++.++.+.|.++ ||.+.. |+..+++
T Consensus 251 ~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--------------~~~~l~~~l~~~-GI~vr~---~~~~~~l 309 (339)
T PRK06959 251 RERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--------------RAAALHAALARR-GIWTRY---FAPPPSV 309 (339)
T ss_pred HHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--------------CHHHHHHHHHhC-CeEEEE---CCCCCeE
Confidence 999999999999999988 77664 35788898865 466888888876 999974 4456799
Q ss_pred EEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 322 RISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
||++..+.++.+++++.|+++++.+.
T Consensus 310 Risi~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 310 RFGLPADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 99997777899999999998887654
No 95
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-39 Score=289.83 Aligned_cols=293 Identities=22% Similarity=0.363 Sum_probs=242.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
+|++ .+..++| +.+|++++ ... ++|++++|+++++..++.+++++||+|++++|+|..+...++..|
T Consensus 59 ~Y~~-~~~~~lr------~~ia~~~~-----~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g 126 (356)
T PRK04870 59 RYPD-PRAAALK------AALRAAMG-----VPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAG 126 (356)
T ss_pred cCCC-CCHHHHH------HHHHHHhC-----cCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcC
Confidence 4654 6789999 99999996 333 589999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
.+++.++++ .++.+|++++++.++ .+++++++++||||||.+++.+++++|+++| ++++|+||+|..+....
T Consensus 127 ~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~----~~~ii~De~y~~~~~~~- 199 (356)
T PRK04870 127 LEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAA----PGLVVVDEAYQPFAGDS- 199 (356)
T ss_pred CEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHC----CCEEEEECCchhhcCcc-
Confidence 999999986 346799999999986 4889999999999999999988888888776 45788899998865321
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
..+ .+ ...++++++.|+|| ++++|+|+||+++++++++.+...... ++.+.+.|.++..+++. .+.+++
T Consensus 200 -~~~--~~-~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~--~~~~~~~q~~a~~~l~~----~~~~~~ 268 (356)
T PRK04870 200 -WLP--RL-ARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPP--YNVNVLTQATALFALEH----VDVLDA 268 (356)
T ss_pred -hHH--HH-hhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCC--CcCCHHHHHHHHHHHhC----HHHHHH
Confidence 111 11 22468999999999 788999999999999999988776533 45888889888888874 456788
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
.++.++++++.+.+.|++++++.+. +.+|+|+|++++ +..++.+.|.+ +||.+.++..|+. +
T Consensus 269 ~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~--------------~~~~~~~~l~~-~gI~v~~~~~f~~~~~ 332 (356)
T PRK04870 269 QAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP--------------DAAAVFDGLKT-RGVLVKNLSGMHPLLA 332 (356)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--------------CHHHHHHHHHH-CCEEEEECCCCCCCCC
Confidence 8889999999999999988888664 566778999876 35677777765 5999999987753 6
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHH
Q 018665 319 TCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
+++||+++. .++.+++++.|+++
T Consensus 333 ~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 333 NCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred CeEEEeCCC-HHHHHHHHHHHHHh
Confidence 799999996 57888888888775
No 96
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=6.1e-39 Score=289.17 Aligned_cols=295 Identities=25% Similarity=0.434 Sum_probs=247.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++.+ +++| +.+|++++ +++++|++++|+++++..++.+++++||+|++++|+|..+...++..|.
T Consensus 50 ~y~~~~~-~~lr------~~ia~~~~-----~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~ 117 (346)
T TIGR01141 50 RYPDPDP-AELK------QALADYYG-----VDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGA 117 (346)
T ss_pred cCCCCCH-HHHH------HHHHHHhC-----cChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCC
Confidence 4654444 8899 99999997 6788999999999999999999999999999999999988888999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++.+ +.+|++++++.++++++++++++|+||||..+|.++++++++.++ + |+++|+|++|+.+...+. .
T Consensus 118 ~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~-~-~~~ii~D~~y~~~~~~~~-~ 192 (346)
T TIGR01141 118 EVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTP-E-DALVVVDEAYGEFSGEPS-T 192 (346)
T ss_pred eEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-C-CcEEEEECchhhhcCCcc-H
Confidence 9999998743 568999999988888999999999999999999999999999887 8 999999999997654321 1
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.... ...+++++++|+||.+|++|+|+||+++++++++.+...... ++.+++.|.++.++++. ..+..+.+
T Consensus 193 ~~~~---~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~----~~~~~~~~ 263 (346)
T TIGR01141 193 LPLL---AEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP--FNLSRLAQAAAIAALRD----DDFIEKTV 263 (346)
T ss_pred HHHH---hhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC--CCCCHHHHHHHHHHhCC----HHHHHHHH
Confidence 1111 123578999999999988999999999999999988776443 45788999999888875 45788889
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC-CCeE
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-DTCI 321 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-~~~i 321 (352)
++++++++.+.+.|++++|+++. +..|+++|++++. +++++.++|.++ ||.+.||..|+. ++++
T Consensus 264 ~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-------------~~~~~~~~L~~~-gI~v~~g~~f~~~~~~i 328 (346)
T TIGR01141 264 EEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-------------DADALFEALLEK-GIIVRDLNSYPGLPNCL 328 (346)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-------------CHHHHHHHHHHC-CeEEEeCCCcCCCCCeE
Confidence 99999999999999988888864 4567889998864 467888888875 999999987643 7899
Q ss_pred EEEeecCHHHHHHHHHHH
Q 018665 322 RISYAASLTTLQAAVERI 339 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l 339 (352)
|++++ ++++++++++.|
T Consensus 329 Rls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 329 RITVG-TREENDRFLAAL 345 (346)
T ss_pred EEecC-CHHHHHHHHHHh
Confidence 99987 678999998876
No 97
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.7e-38 Score=285.75 Aligned_cols=292 Identities=26% Similarity=0.452 Sum_probs=241.2
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEE-eCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILV-SNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~-~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|+ +....++| +.+|++++ +++++|++ ++|+++++..++.+++++||+|++++|+|..+...++..|.
T Consensus 66 y~-~~~~~~lr------~~ia~~~~-----~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~ 133 (361)
T PRK00950 66 YP-EPDAPELR------EALSKYTG-----VPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGA 133 (361)
T ss_pred CC-CCCHHHHH------HHHHHHhC-----CCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCC
Confidence 43 34458899 99999986 77899999 78889999999999989999999999999999989999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++.+ .++.+|++.+++.++++++++++++|+||||..+| .+++.++|+++ |+++|+||+|.++. +...
T Consensus 134 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~---~~~l~~l~~~~-~~~li~De~y~~~~--~~~~ 205 (361)
T PRK00950 134 KPVYAKRE--EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIP---EEDIRKILEST-DALVFVDEAYVEFA--EYDY 205 (361)
T ss_pred EEEEeecC--CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcC---HHHHHHHHHHC-CcEEEEECchhhhC--ccch
Confidence 99999854 45678999999999888899999999999999999 66677777899 99999999998764 2111
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.++ ....+++++++|+||.+|++|+|+||+++++++++.+.+....+ +.+.+.+.++..+++. .+++++..
T Consensus 206 ~~~---~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~----~~~~~~~~ 276 (361)
T PRK00950 206 TPL---ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF--SLTRLSQAAAIAALSD----KEYIEKSI 276 (361)
T ss_pred HHH---HHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcC----HHHHHHHH
Confidence 222 12246889999999999999999999999999999888765543 4788899888888874 57788888
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CCe
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTC 320 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~~ 320 (352)
+.++++++.+.+.|+ +.+ .+.+++++|++++.. ++.++++.|.++ ||.+.||..|.. +++
T Consensus 277 ~~~~~~r~~l~~~l~----~~~-~~~~~~~i~~~~~~~------------~~~~~~~~l~~~-gv~v~~~~~f~~~~~~~ 338 (361)
T PRK00950 277 EHGIKSREYLYNELP----FKV-YPSEANFVLVDVTPM------------TAKEFCEELLKR-GVIVRDCTSFRGLGDYY 338 (361)
T ss_pred HHHHHHHHHHHhhcC----eeE-CCCcceEEEEECCCC------------CHHHHHHHHHHC-CEEEeeCCccCCCCCCe
Confidence 888888888888876 343 356788899988432 788999999875 999999887743 569
Q ss_pred EEEEeecCHHHHHHHHHHHHHHH
Q 018665 321 IRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
+|++++ +.++++++++.|++++
T Consensus 339 lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 339 IRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred EEEECC-CHHHHHHHHHHHHHHh
Confidence 999998 4678999999999876
No 98
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1e-37 Score=278.53 Aligned_cols=278 Identities=15% Similarity=0.164 Sum_probs=227.5
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
..+|| +++|++++ .++|++|+|+++++..+. .+.+||+|++++|+|..+...++..|.+++.+++
T Consensus 51 ~~~Lr------~~ia~~~~-------~~~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~ 115 (330)
T PRK05664 51 DDGLE------AAARAYYG-------APQLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE 115 (330)
T ss_pred hHHHH------HHHHHHhC-------CCCEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech
Confidence 37888 99999984 579999999999998775 3578999999999999999999999999999875
Q ss_pred cCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCC
Q 018665 90 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 169 (352)
Q Consensus 90 ~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~ 169 (352)
+ ++++.++ +++++++++||||||.+++.+++++|+++|+++ +++||+||+|.++. ...++..+.
T Consensus 116 ~----------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~-~~~iI~DE~y~~~~----~~~s~~~~~ 179 (330)
T PRK05664 116 A----------EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAAR-GGWLVVDEAFMDNT----PQHSLAACA 179 (330)
T ss_pred h----------hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhc-CCEEEEECCcccCC----Ccccccccc
Confidence 3 2444443 677889999999999999999999999999999 99999999997653 123455554
Q ss_pred CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 249 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (352)
. .+++++++||||.+|++|+|+||+++++++++.+...... ++.+.+.+.++.++++. ..+.++.++.+++++
T Consensus 180 ~-~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~L~~----~~~~~~~~~~~~~~r 252 (330)
T PRK05664 180 H-RPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGP--WTVSGPTRWLAQAALAD----TPWQRRQRERLLAAS 252 (330)
T ss_pred c-CCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCC--CCCCHHHHHHHHHHHhC----hHHHHHHHHHHHHHH
Confidence 3 5789999999999999999999999999999998876543 45788899999999975 466678888999999
Q ss_pred HHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeecCH
Q 018665 250 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASL 329 (352)
Q Consensus 250 ~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~~~ 329 (352)
+.+.+.|+++ ++... +..++|+|++++ ++.++.+.|.++ ||.+.. |+.++++||+++.+.
T Consensus 253 ~~l~~~L~~~-~~~~~-~~~~~f~~~~~~--------------~~~~~~~~l~~~-gi~v~~---f~~~~~iRis~~~~~ 312 (330)
T PRK05664 253 QRLAALLRRH-GLTPA-GGCALFQWVRTE--------------DAAALHEFLARR-GILTRL---FEQPASLRFGLPADE 312 (330)
T ss_pred HHHHHHHHHC-CCccc-CCcceEEEEecC--------------CHHHHHHHHHHC-CeEEEE---CCCCCeEEEECCCCH
Confidence 9999999987 65421 222367777754 567888888765 999974 446789999999766
Q ss_pred HHHHHHHHHHHHHHhh
Q 018665 330 TTLQAAVERIKKGLLT 345 (352)
Q Consensus 330 ~~l~~~~~~l~~~~~~ 345 (352)
++.+++.+.|++..++
T Consensus 313 ~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 313 ADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7788888888777654
No 99
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=3.5e-38 Score=281.61 Aligned_cols=285 Identities=21% Similarity=0.306 Sum_probs=238.5
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++. .+++| +.++++++ +++++|++|+|+++++..+... +.+| +|++++|+|..+...++..|.
T Consensus 43 ~y~~~~-~~~lr------~~la~~~~-----~~~~~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~ 108 (330)
T TIGR01140 43 RYPDPE-YDELR------AAAAAYYG-----LPAASVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGH 108 (330)
T ss_pred hCCCcc-HHHHH------HHHHHHhC-----CChhhEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCC
Confidence 465555 49999 99999986 6789999999999999987665 4566 799999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++ |++++++.++ +++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|.++...
T Consensus 109 ~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~---- 173 (330)
T TIGR01140 109 EVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPETLLALAARLRAR-GGWLVVDEAFIDFTPD---- 173 (330)
T ss_pred EEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhc-CCEEEEECcccccCCc----
Confidence 998886 7888888884 677899999999999999999999999999999 9999999999887643
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.++.......+++++++|+||.+|++|+|+||+++++++++.+...... +++|++.|.++..+++. .++.+..+
T Consensus 174 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~~----~~~~~~~~ 247 (330)
T TIGR01140 174 ASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP--WTVNGPARAAGRAALAD----TAWQAATR 247 (330)
T ss_pred cchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC--CCchHHHHHHHHHHHhc----hHHHHHHH
Confidence 2332222235789999999999999999999999999999998876543 45788999999999985 56777888
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC--CCCe
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DDTC 320 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~--~~~~ 320 (352)
+.++++++.+.+.|++++.+++. +.+|+|+|++++ +..+++++|.++ ||.+.||..|. ..++
T Consensus 248 ~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~--------------~~~~l~~~l~~~-gi~v~pg~~f~~~~~~~ 311 (330)
T TIGR01140 248 ARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP--------------DAAALHEALARR-GILIRDFDNFPGLDPRY 311 (330)
T ss_pred HHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC--------------CHHHHHHHHHHC-CEEEEECCCCCCCCCCE
Confidence 99999999999999998546554 567889999876 456899999875 99999999884 3479
Q ss_pred EEEEeecCHHHHHHHHHHH
Q 018665 321 IRISYAASLTTLQAAVERI 339 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l 339 (352)
+||+++.+.++ ++++..|
T Consensus 312 iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 312 LRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred EEEEecCHHHH-HHHHHhh
Confidence 99999986566 7777665
No 100
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=280.60 Aligned_cols=292 Identities=17% Similarity=0.281 Sum_probs=237.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++.|..++| +++|++++ +++++|++|+|+++++..++. + ++ +.++++.|+|..+...++..|.
T Consensus 53 ~Y~~~~g~~~lr------~aia~~~~-----~~~~~I~it~Ga~~al~~~~~-l-~~-~~viv~~P~y~~~~~~~~~~G~ 118 (349)
T PRK07908 53 AYPSTEDERRAR------AAVAARHG-----RTPDEVLLLAGAAEGFALLAR-L-RP-RRAAVVHPSFTEPEAALRAAGI 118 (349)
T ss_pred cCCCccchHHHH------HHHHHHhC-----cChhhEEECCCHHHHHHHHHh-c-CC-CeEEEeCCCChHHHHHHHHcCC
Confidence 477778999999 99999986 788999999999999998887 4 55 5678899999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++.+ +.+|++.+ +++++++++++||||||.++|.+ +|.++|+ + +.++|+||+|+++.. +. .
T Consensus 119 ~i~~v~~~~~--~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~---~l~~l~~-~-~~~iIvDe~y~~~~~-~~-~ 185 (349)
T PRK07908 119 PVHRVVLDPP--FRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE---QLLALRR-P-GRILVVDEAFADAVP-GE-P 185 (349)
T ss_pred EEEeeccCcc--cCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH---HHHHHHh-c-CCEEEEECcchhhcc-CC-c
Confidence 9999998743 66888755 34788999999999999999954 5566665 4 667888999998743 32 3
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.++... +.+++++++|+||.+|++|+|+||+++++++++.+...... +..+++.+.++..+++.. ...++++.+
T Consensus 186 ~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~--~~~~~~~~~ 259 (349)
T PRK07908 186 ESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAH--WPVGTLQLEAIAACCAPR--AVAEAAADA 259 (349)
T ss_pred cccccc--cCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCC--CCccHHHHHHHHHHhccc--chHHHHHHH
Confidence 444432 24689999999999999999999999999999998876544 446777777777776631 246778889
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CCe
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTC 320 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~~ 320 (352)
+.++++++.+.+.|+++ ++.+..+++|+|+|++++ +...+.+.|.+ +||.+.||..|.. +++
T Consensus 260 ~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~--------------~~~~~~~~l~~-~gI~v~~g~~f~~~~~~~ 323 (349)
T PRK07908 260 ARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVP--------------DAELLRKRLRE-RGIAVRRGDTFPGLDPDY 323 (349)
T ss_pred HHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECC--------------cHHHHHHHHHh-CCEEEEECCCCCCCCCCe
Confidence 99999999999999988 888888889999999986 34567776654 5999999988753 689
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHh
Q 018665 321 IRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
+||+++. +++++++++.|++++.
T Consensus 324 vRis~~~-~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 324 LRLAVRP-RAEVPVLVQALAEILK 346 (349)
T ss_pred EEEEeCC-CccHHHHHHHHHHHHh
Confidence 9999964 5788999999988765
No 101
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=3.1e-38 Score=285.03 Aligned_cols=299 Identities=24% Similarity=0.396 Sum_probs=243.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.+| ++.|..++| +.+|++++ +++++|++++|+++++..++..++++||+|+++.|+|..+...++..|
T Consensus 52 ~~y-~~~g~~~lr------~~ia~~~~-----~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g 119 (352)
T PRK03321 52 NRY-PDMGAVELR------AALAEHLG-----VPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQVAG 119 (352)
T ss_pred CcC-CCCcHHHHH------HHHHHHhC-----cCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHcC
Confidence 346 567899999 99999996 678899999999999999999999999999999999998888999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++++ +.+|++.+++.++++++++++++|+||||.++|.+++.++++.+ ++ ++++|+||+|.++.+.+..
T Consensus 120 ~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~-~~~ii~De~y~~~~~~~~~ 195 (352)
T PRK03321 120 ATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAV-PA-DVLVVLDEAYVEYVRDDDV 195 (352)
T ss_pred CEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CC-CeEEEEechHHHhccCcCC
Confidence 99999998633 56899999999988999999999999999999977777776654 47 9999999999998776543
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..++.... ..+++++++|+||.+|++|+|+||+++++++++.+.+.. ..++.|.+.|.++.+++.. .+...+.
T Consensus 196 ~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~--~~~~~s~~~q~~a~~~l~~----~~~~~~~ 268 (352)
T PRK03321 196 PDGLELVR-DHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVA--VPFSVNSLAQAAAIASLAA----EDELLER 268 (352)
T ss_pred CcHHHHHh-hCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcC----HHHHHHH
Confidence 33333232 247899999999999999999999999999999988764 3456899999988888874 3334444
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
.+.+.++++.+.+.|++. ++.+. +.+|+|+|++++. +..++.+.|.+ .||.+.+ | .+.++
T Consensus 269 ~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~-------------~~~~~~~~l~~-~gI~v~~---~-~~~~i 328 (352)
T PRK03321 269 VDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGE-------------RTADFAAAAAE-AGVVVRP---F-AGEGV 328 (352)
T ss_pred HHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCC-------------CHHHHHHHHHH-CCEEEEc---c-CCCcE
Confidence 555566677888999886 77654 4567889998853 57789998875 5999987 3 24579
Q ss_pred EEEeecCHHHHHHHHHHHHHHHh
Q 018665 322 RISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~ 344 (352)
||+++. .++.++++++|++++.
T Consensus 329 Ri~~~~-~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 329 RVTIGA-PEENDAFLRAARAWRA 350 (352)
T ss_pred EEeeCC-HHHHHHHHHHHHHHhc
Confidence 999865 5888999999988764
No 102
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=261.67 Aligned_cols=329 Identities=21% Similarity=0.265 Sum_probs=265.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH--hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK--ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~--~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
-|++..|.+++. .-+.++.+ .+......-+|++|+|.|.++..+++++++.||.|++..++|.+.....+..
T Consensus 95 QYg~s~G~peLl------~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~ 168 (472)
T KOG0634|consen 95 QYGQSSGIPELL------LFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEAL 168 (472)
T ss_pred ccccccCcHHHH------HHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhcccc
Confidence 489999999999 88888665 2333334459999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC---------CeeEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE---------KSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~---------~~~~i~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
|+.++.|+++.+ ++++|.|++.+.. ++++++. .+-+||||..++.++.++|.++|++| |++||+||
T Consensus 169 gv~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy-DfLIVeDd 244 (472)
T KOG0634|consen 169 GVKIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY-DFLIVEDD 244 (472)
T ss_pred CceEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc-CEEEEecC
Confidence 999999998643 3799999988742 3555553 44489999999999999999999999 99999999
Q ss_pred cccccccCC---C-----C-----------ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhc
Q 018665 151 IYEHIIYAP---A-----T-----------HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 211 (352)
Q Consensus 151 ~~~~~~~~~---~-----~-----------~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~ 211 (352)
.|..+-+.. . . .+++.+++. .+|+|-+.||||.++ ||+|+||+.+++.+++++-+....
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDt-dGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~ 322 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDT-DGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEV 322 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccc-cccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcce
Confidence 999876652 1 0 233444444 589999999999998 999999999999999999888888
Q ss_pred cccCCChHHHHHHHHHhcccCC--ChHHHHHHHHHHHHHHHHHHHHhccc-CC--ceecCCCCceEEEeecCCccCCcc-
Q 018665 212 FTSGASSISQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGEL-EG--VKMSEPQGAFYLFIDFSTYYGSEA- 285 (352)
Q Consensus 212 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~-~g--~~~~~~~~g~~~~~~~~~~~~~~~- 285 (352)
.+.++|.+.|..+.+++..... ..+|+.+++..|..|+..+...|.+. |. .++.+|.+|+|+|++++- ..+..
T Consensus 323 ~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~-~~~~~~ 401 (472)
T KOG0634|consen 323 ATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPY-INFDTK 401 (472)
T ss_pred eecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecc-cccccc
Confidence 8888999999999998886221 02778899999999999999999874 44 577799999999999971 11100
Q ss_pred cCCCCCCChHHHHHHHHHccCEEeccCCCCCC------CC-eEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 286 EGFGKIENSESLCRYLLDKAQVALVPGDAFGD------DT-CIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 286 ~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~------~~-~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.. ...+++....+.++||.+.+|+.|.. .. ++|++++. +.|+++++++++..++++.-
T Consensus 402 ~~i---~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 402 KSI---NQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHF 468 (472)
T ss_pred cch---HHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHh
Confidence 000 02445555556667999999998852 23 89999999 77999999999999988753
No 103
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.2e-35 Score=268.40 Aligned_cols=316 Identities=35% Similarity=0.601 Sum_probs=263.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|.++.+..+++ +.++++++ .++.+...+++++++|+++++..++.++.++|++|+++.++|.++..+++..|
T Consensus 31 ~~~~~~~~~~l~------~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~ 104 (350)
T cd00609 31 GYYPDPGLPELR------EAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAG 104 (350)
T ss_pred CCCCCCCcHHHH------HHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCC
Confidence 578899999999 99999999 77766668899999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++.+.......+.+.++...+++++++++++++||+|..+|.+++++|+++|+++ |+++|+|++++++.+.+..
T Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~-~~~~ivD~a~~~~~~~~~~ 183 (350)
T cd00609 105 AEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKH-GILIISDEAYAELVYDGEP 183 (350)
T ss_pred CEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhC-CeEEEEecchhhceeCCcc
Confidence 999999987554432333667777778999999999999999999999999999999999 9999999999987765543
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...+. .....+.++++.|++|.++.+|.++|++++++ ++++.+.......+.+++...+.++..+++.. .++.++
T Consensus 184 ~~~~~-~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~ 259 (350)
T cd00609 184 PPALA-LLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDG---EEHLEE 259 (350)
T ss_pred ccccc-CcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCc---HHHHHH
Confidence 32112 22335678999999999988899999999999 79999888777666789999999999999862 267888
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC--CC
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DD 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~--~~ 318 (352)
..+.++++++++.+.|++.+...+..+..|+++|+.++... +...+.+ +++++||.+.++..+. .+
T Consensus 260 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~-~l~~~gi~i~~~~~~~~~~~ 327 (350)
T cd00609 260 LRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGD-----------DEEFLER-LLLEAGVVVRPGSAFGEGGE 327 (350)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCC-----------hHHHHHH-HHHhCCEEEecccccccCCC
Confidence 89999999999999999885544356778899999887541 3444544 4545699999988776 67
Q ss_pred CeEEEEeecCHHHHHHHHHHHHH
Q 018665 319 TCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
.++|++++...+|+++++++|++
T Consensus 328 ~~iRi~~~~~~~~i~~~~~al~~ 350 (350)
T cd00609 328 GFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred CeEEEEeeCCHHHHHHHHHHhhC
Confidence 89999999988999999998863
No 104
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-36 Score=270.45 Aligned_cols=281 Identities=21% Similarity=0.337 Sum_probs=225.4
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
++.+..++| +++++++++.+ +++++|++|+|+++++..++.++ ++|++++|+|..+...++..|.+++
T Consensus 54 ~~~~~~~Lr------~aia~~~~~~~--~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~ 121 (335)
T PRK14808 54 YDSPDEELI------EKILSYLDTDF--LSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFL 121 (335)
T ss_pred CCCChHHHH------HHHHHHhCCCC--CCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEE
Confidence 455899999 99999998444 57899999999999999999887 5799999999999999999999999
Q ss_pred EecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 86 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.++++.+ +.++... + ..++++++++||||||.+++.+++++|+ ++ +++||+||+|.++. +....+.
T Consensus 122 ~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~-~~~ii~DE~Y~~f~--~~~~~~~ 187 (335)
T PRK14808 122 EVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFEREEIERIL----KT-GAFVALDEAYYEFH--GESYVDL 187 (335)
T ss_pred EecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHHHHH----hc-CCEEEEECchhhhc--CCchHHH
Confidence 9998643 3344322 2 2568899999999999999977776665 57 99999999999863 2211121
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 245 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (352)
....+++++++|+||.+|++|+|+||+++++++++.+.+.... ++.+.+.+.++.++++. .++..+..+.+
T Consensus 188 ---~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~--~~~~~~~q~a~~~~l~~----~~~~~~~~~~~ 258 (335)
T PRK14808 188 ---LKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLP--FNVSYVSQMFAKVALDH----REIFEERTKFI 258 (335)
T ss_pred ---HHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCC--CCCCHHHHHHHHHHHhC----HHHHHHHHHHH
Confidence 1224689999999999999999999999999999998776533 55788999998888874 45677777888
Q ss_pred HHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEe
Q 018665 246 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325 (352)
Q Consensus 246 ~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~ 325 (352)
.++++.+.+.|++. |+++..+ .|.|+|+.++.. +..++.+.|.++ ||.+.. | ..++||++
T Consensus 259 ~~~r~~l~~~L~~~-g~~~~~~-~g~f~~~~l~~~------------~~~~~~~~l~~~-Gi~V~~---~--~~~~Risi 318 (335)
T PRK14808 259 VEERERMKSALREM-GYRITDS-RGNFVFIFMEKE------------EKERLLEHLRAK-NIAVRS---F--REGVRITI 318 (335)
T ss_pred HHHHHHHHHHHHHC-CCEECCC-CCeEEEEeCCCc------------cHHHHHHHHHHC-CeEEEE---C--CCCeEEec
Confidence 88889999999987 7887766 456689998743 567888888865 999984 2 47899998
Q ss_pred ecCHHHHHHHHHHHHHH
Q 018665 326 AASLTTLQAAVERIKKG 342 (352)
Q Consensus 326 ~~~~~~l~~~~~~l~~~ 342 (352)
+.+ ++.+++++.|+++
T Consensus 319 ~~~-~~~~~~~~~l~~~ 334 (335)
T PRK14808 319 GKR-EENDMILKELEVF 334 (335)
T ss_pred CCH-HHHHHHHHHHHhh
Confidence 874 7778888887653
No 105
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-36 Score=270.77 Aligned_cols=286 Identities=21% Similarity=0.338 Sum_probs=228.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.| ++.|..++| ++++++++ +++++|++|+|+++++..++..+ +||+|+++.|+|..+...++..|.
T Consensus 51 ~Y-~~~g~~~lr------~~ia~~~~-----~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~ 116 (337)
T PRK03967 51 RY-PHITSDPLR------EAIAEFYG-----LDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAKLNGI 116 (337)
T ss_pred cC-CCCCHHHHH------HHHHHHhC-----cCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHHHcCC
Confidence 46 467899999 99999997 78899999999999999888776 689999999999999888999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++ .++.+|++.+++.+ ++++++++++||||||.+++.+ +|.+++ ++ ++++|+||+|.++.. .
T Consensus 117 ~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~---~l~~i~-~~-~~~ii~De~y~~~~~--~-- 184 (337)
T PRK03967 117 PVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE---EILKVL-ET-GKPVVLDEAYAEFSG--K-- 184 (337)
T ss_pred eEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH---HHHHHH-hc-CCEEEEECchhhhcc--c--
Confidence 99999986 34678999998865 4778889999999999999955 455555 57 999999999998642 1
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
+........+++++++|+||.+|++|+|+||+++++++++.+.+.... ++.+.+.|.++..+++. .++..+.+
T Consensus 185 -~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~--~~~~~~~q~~~~~~l~~----~~~~~~~~ 257 (337)
T PRK03967 185 -SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPP--FSLNILTMKIVRLALDH----YDLIEERI 257 (337)
T ss_pred -chHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCC--CCCCHHHHHHHHHHHhC----HHHHHHHH
Confidence 111111224689999999999999999999999999999998877654 45789999999999975 55666666
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEE
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 322 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iR 322 (352)
+.+.++++.+.+.|.+. ..+.+++|+|++++ +.+.|.++ ||.+.++.. ..++++|
T Consensus 258 ~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~~------------------~~~~l~~~-gi~v~~~~~-~~~~~~R 312 (337)
T PRK03967 258 DYIIKERERVRRELGEY-----AYPSDANFLLLKLD------------------AYDYLLEN-GIVVRKLSG-RLEGHIR 312 (337)
T ss_pred HHHHHHHHHHHHHhccC-----cCCCCCcEEEEhHH------------------HHHHHHHC-CEEEEeCCC-CCCCeEE
Confidence 77777788888888764 23678888997642 55777765 999987643 3467999
Q ss_pred EEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 323 ISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 323 i~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
|+++. .++.+++++.|+++.+.++
T Consensus 313 i~~~~-~~~~~~l~~~l~~~~~~~~ 336 (337)
T PRK03967 313 VTVGK-REENDEFIKALKEIKEGYG 336 (337)
T ss_pred EecCC-HHHHHHHHHHHHHHHHhcC
Confidence 99887 3566777888877776654
No 106
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-36 Score=244.42 Aligned_cols=322 Identities=18% Similarity=0.311 Sum_probs=256.6
Q ss_pred CCccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCC---C--CEEEec-CCCCCCh
Q 018665 1 MQFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSP---G--DEVIIP-APFWVSY 73 (352)
Q Consensus 1 ~~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~---~--~~vl~~-~~~~~~~ 73 (352)
|++|+.+.|...+. +++++.+. ++||.+.+.+|.+|+|++++...++..+..+ | .+|++| .|.|.+|
T Consensus 67 ~cnY~~pQG~~~li------~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY 140 (417)
T COG3977 67 LCNYDGPQGKAVLI------DALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGY 140 (417)
T ss_pred HhcCCCCcchhHHH------HHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccc
Confidence 57899999999999 99999999 9999999999999999999999999887532 2 467777 7999999
Q ss_pred HHHHHhcCCeEEEec---ccCC--CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 74 PEMARIADATPVILP---TRIS--ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~---~~~~--~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.++.-.-..-|..-| +.++ -.+.+|.++|. +.+++.+|+++-|.||||.++.++++.+|.++|++| |+++|+
T Consensus 141 ~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~-giPliI 217 (417)
T COG3977 141 ADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQH-GIPLII 217 (417)
T ss_pred cccccCccceeeccCCcccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc-CCcEEE
Confidence 866543332222211 1112 23557888775 357889999999999999999999999999999999 999999
Q ss_pred cccccccccCCCCccccccCC-CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHH
Q 018665 149 DEIYEHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 227 (352)
Q Consensus 149 D~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (352)
|.+|+. +.....+.... ...+|.+.+.|+||. |+||.|+|.++++++++..+..+....+..++.++++.++.+
T Consensus 218 DnAYg~----PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~m 292 (417)
T COG3977 218 DNAYGV----PFPGIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEM 292 (417)
T ss_pred ecccCC----CCCceecccccccCCCCEEEEeehhhc-CCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHH
Confidence 999974 11112222221 124789999999998 899999999999999999999998888899999999999999
Q ss_pred hcccCCChHHHHHH-HHHHHHHHHHHHHHhccc-C--CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 228 LGLGYAGGEVVSKM-VKAFRERRDFLVKSFGEL-E--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 228 l~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~-~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
++.+.+ ....+++ +-.++.+.+...+.|++. | .+.+..|++..|+|+.+.+.+- ++.++.++|.+
T Consensus 293 ie~gdl-~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI----------tt~~LYq~LKa 361 (417)
T COG3977 293 IESGDL-LRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI----------TTEELYQRLKA 361 (417)
T ss_pred hhcchH-HHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC----------CHHHHHHHHHh
Confidence 998654 2333333 345677776666666653 2 4667789999999999877642 78999999998
Q ss_pred ccCEEeccCCCCCC---------CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 304 KAQVALVPGDAFGD---------DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 304 ~~gi~i~~g~~~~~---------~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+ |+.+.||..|.. .+|+|++...+++++++++.+|.+.+++.-.
T Consensus 362 ~-Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 362 R-GVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred C-eEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7 999999987753 3699999999999999999999999887543
No 107
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=5.6e-35 Score=258.84 Aligned_cols=267 Identities=19% Similarity=0.342 Sum_probs=203.3
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
...+| +.++++++ ++|++|+|+++++..++..+ .+||+|++++|+|..+...++..|.+++.++
T Consensus 42 ~~~l~------~~ia~~~~--------~~I~vt~G~~~al~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~- 105 (311)
T PRK08354 42 YEWLE------EEFSKLFG--------EPIVITAGITEALYLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP- 105 (311)
T ss_pred hHHHH------HHHHHHHC--------CCEEECCCHHHHHHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC-
Confidence 46677 88888874 47999999999999877544 4899999999999999999999999997653
Q ss_pred cCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCC
Q 018665 90 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 169 (352)
Q Consensus 90 ~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~ 169 (352)
+|++.+++.++ +++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.++.+++. + .
T Consensus 106 -------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~-~~~li~De~y~~f~~~~~---~---~- 169 (311)
T PRK08354 106 -------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDR-NALLILDEAFIDFVKKPE---S---P- 169 (311)
T ss_pred -------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhc-CcEEEEeCcchhcccccc---c---c-
Confidence 47888888876 567899999999999999999999999999999 999999999999877542 1 1
Q ss_pred CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 249 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (352)
.++++++++||||.+|++|+|+||+++ +.+.++..... +..+...+.++..+++. ..+++.+.++.+++.+
T Consensus 170 -~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 240 (311)
T PRK08354 170 -EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMP--WSIGSTGYAFLEFLIED---DFEHLRKTMPLIWREK 240 (311)
T ss_pred -CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCC--ccCCHHHHHHHHHHHHh---HHHHHHHHHHHHHHHH
Confidence 157899999999999999999999998 55566555433 34566666666666653 1234444444444444
Q ss_pred HHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeecCH
Q 018665 250 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASL 329 (352)
Q Consensus 250 ~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~~~ 329 (352)
+.+.+.+ ...+.+++++ ++++ ++.++++.|.++ ||.+.||..|+.++++||+++.+
T Consensus 241 ~~l~~~l-------~~~~~~~~~~-~~~~--------------~~~~~~~~l~~~-gv~v~~g~~f~~~~~iRi~~~~~- 296 (311)
T PRK08354 241 ERFEKAL-------YVKSDANFFI-KDVG--------------DAEKFVEFLKRN-GILVRDCTSFGLPGYIRFSVRDR- 296 (311)
T ss_pred HHHHHhc-------CCCCCCcEEE-EECC--------------CHHHHHHHHHHC-CeEEEecccCCCCCeEEEEeCCH-
Confidence 4444333 2245555544 5543 567888888765 99999999998789999999984
Q ss_pred HHHHHHHHHHHH
Q 018665 330 TTLQAAVERIKK 341 (352)
Q Consensus 330 ~~l~~~~~~l~~ 341 (352)
++.+++++.|++
T Consensus 297 ~~~~~l~~al~~ 308 (311)
T PRK08354 297 EENEKLIRALRE 308 (311)
T ss_pred HHHHHHHHHHHH
Confidence 344555555554
No 108
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=7e-33 Score=254.47 Aligned_cols=290 Identities=20% Similarity=0.228 Sum_probs=227.3
Q ss_pred HHHHHHHHhcCCCC-CCCcEEEeCChHHHHHHHHHHh----cCCCCEEEecCCCCCC----hHHHHHhcCCeEEEecccC
Q 018665 21 QQFVINLKENGLSY-TPDQILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRI 91 (352)
Q Consensus 21 ~~ia~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~l----~~~~~~vl~~~~~~~~----~~~~~~~~g~~v~~i~~~~ 91 (352)
+.++++++ . ++++|++++|+|++++.++.++ .++||+|+++++.|++ +...++..|.+++.++++.
T Consensus 70 ~~la~~~g-----~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 144 (401)
T PRK10874 70 EQVAQLLN-----APDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA 144 (401)
T ss_pred HHHHHHcC-----CCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC
Confidence 88888886 5 6789999999999999999987 3688999999999876 4456678899999999863
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
++.+|++++++.++++++++++++|+||||.++| +++|.++|+++ |+++|+|++|+... .+..+..
T Consensus 145 --~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~i~~l~~~~-g~~~ivD~a~~~g~----~~~~~~~---- 210 (401)
T PRK10874 145 --DRLPDVDLLPELITPRTRILALGQMSNVTGGCPD---LARAITLAHQA-GMVVMVDGAQGAVH----FPADVQA---- 210 (401)
T ss_pred --CCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCC---HHHHHHHHHHc-CCEEEEECCccccc----ccCCchh----
Confidence 4568999999999999999999999999999999 89999999999 99999999986421 1222221
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhhh---------------------hccccCCChHHHHHHHHHhcc
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~ 230 (352)
.+.++++.|++|.+|.+| +|+++.++++++.+.... ....++++...+.++.++++.
T Consensus 211 ~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~ 288 (401)
T PRK10874 211 LDIDFYAFSGHKLYGPTG--IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEW 288 (401)
T ss_pred cCCCEEEEecccccCCCc--cEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHH
Confidence 234588899999887555 699999998887654221 111235666677777777754
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 310 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~ 310 (352)
. .+....+..++.++.++++.+.|++++|+.+..+..+.++++.+++. +..++.+.|.+ .||.+.
T Consensus 289 l--~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~------------~~~~~~~~L~~-~gI~v~ 353 (401)
T PRK10874 289 L--ADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV------------HHSDLVTLLAE-YGIALR 353 (401)
T ss_pred H--HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc------------CHHHHHHHHHH-CCcEEe
Confidence 1 12334556778888899999999988898877655555566676643 67888888876 499999
Q ss_pred cCCCCC--------CCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 311 PGDAFG--------DDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 311 ~g~~~~--------~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+|..|. ..+++|+|++. +++|++++++.|+++++.+
T Consensus 354 ~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 354 AGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred ccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 987653 35899999997 8999999999999988754
No 109
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.7e-32 Score=251.73 Aligned_cols=290 Identities=21% Similarity=0.222 Sum_probs=226.4
Q ss_pred HHHHHHHHhcCCCC-CCCcEEEeCChHHHHHHHHHHh----cCCCCEEEecCCCCCC----hHHHHHhcCCeEEEecccC
Q 018665 21 QQFVINLKENGLSY-TPDQILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRI 91 (352)
Q Consensus 21 ~~ia~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~l----~~~~~~vl~~~~~~~~----~~~~~~~~g~~v~~i~~~~ 91 (352)
+.++++++ . ++++|++|+|+|++++.++.++ +++||+|+++++.|++ +...++..|.+++.++++.
T Consensus 67 ~~la~~~g-----~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 141 (398)
T TIGR03392 67 QQVARFLN-----APDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA 141 (398)
T ss_pred HHHHHHhC-----CCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC
Confidence 88999887 5 3689999999999999999887 4788999999999976 4456788999999999863
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
++.+|+++++++++++++++++++|+||||..+| +++|.++|+++ |+++++|++|+... .+..+..
T Consensus 142 --~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~~~----~~~~~~~---- 207 (398)
T TIGR03392 142 --DLLPDIRQLPELLTPRTRILALGQMSNVTGGCPD---LARAITLAHQY-GAVVVVDGAQGVVH----GPPDVQA---- 207 (398)
T ss_pred --CCCcCHHHHHHHhccCceEEEEECccccccccCC---HHHHHHHHHHc-CCEEEEEhhhhcCC----CCCChhh----
Confidence 3458999999999989999999999999999999 88999999999 99999999997522 1222221
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhhh---------------------hccccCCChHHHHHHHHHhcc
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~ 230 (352)
.+.++++.|.+|.+|.+| +|+++.++++++.+.... ....++++.....++.++++.
T Consensus 208 ~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~ 285 (398)
T TIGR03392 208 LDIDFYAFSGHKLYGPTG--IGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEW 285 (398)
T ss_pred cCCCEEEEecccccCCCc--eEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHH
Confidence 234588899999887444 899999998887764221 111235666677777777754
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 310 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~ 310 (352)
- .....+++.++.++.++++.+.|++++++.+..+..+.++++.+++. ++.++.+.|.++ ||.+.
T Consensus 286 l--~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~------------~~~~l~~~L~~~-gI~v~ 350 (398)
T TIGR03392 286 L--TDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV------------HHSDLAALLAES-GIALR 350 (398)
T ss_pred H--HHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc------------CHHHHHHHHHhC-CEEEe
Confidence 1 12335567788888999999999988888877544555566666643 678898888764 99999
Q ss_pred cCCCCC--------CCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 311 PGDAFG--------DDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 311 ~g~~~~--------~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+|..|. .++++|+|++. +++|++++++.|+++++.+
T Consensus 351 ~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 351 AGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred cCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 988663 35799999987 8899999999999988753
No 110
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=2e-31 Score=237.83 Aligned_cols=278 Identities=21% Similarity=0.233 Sum_probs=214.4
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEec---CCCCCChHHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP---APFWVSYPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~---~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+.+|++++ .+++++++++|+++++..++.++.++||.|+++ .|+|.++...++..|.++..+ .
T Consensus 61 ~~lA~~~g-----~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~---------~ 126 (346)
T TIGR03576 61 ELGREHLG-----GPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES---------D 126 (346)
T ss_pred HHHHHHcC-----CCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEecc---------C
Confidence 88888886 677999999999999999999999999999975 479999999999999876332 1
Q ss_pred CHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEE
Q 018665 98 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 177 (352)
Q Consensus 98 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 177 (352)
++++++. . +++++|+++ +++++|.+++.+.+++|+++|+++ |+++++||+|+.+........+.... +..++
T Consensus 127 ~l~~l~~-~-~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~-~~~livDEAy~~~~~~~~~~~~~~~~----~~div 198 (346)
T TIGR03576 127 ELSELKK-I-DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK-EAIVLVDDASGARVRRLYGQPPALDL----GADLV 198 (346)
T ss_pred CHHHHhh-C-cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc-CCEEEEECCccccccccCCCCCHHHc----CCcEE
Confidence 4555433 2 456777774 568999999999999999999999 99999999998754221111122111 23377
Q ss_pred EeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 018665 178 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 257 (352)
Q Consensus 178 ~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 257 (352)
+.|+||. ++|+|+||+++++++++.+......+.++.+++.+.++.++|+. .. .+.+++.++++++.+.+.++
T Consensus 199 v~s~SKa--laG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~----~~-~~~~~~~l~~r~~~~~~~l~ 271 (346)
T TIGR03576 199 VTSTDKL--MDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEE----FE-LSRIRDAFKRKEEVYLRLFD 271 (346)
T ss_pred Eeccchh--ccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhh----cc-HHHHHHHHHHHHHHHHHHHH
Confidence 8899994 57899999999999999999888777777888899999999975 12 34567778888888888887
Q ss_pred ccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-CCCeEEEEeecCHH---HHH
Q 018665 258 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-DDTCIRISYAASLT---TLQ 333 (352)
Q Consensus 258 ~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-~~~~iRi~~~~~~~---~l~ 333 (352)
+ +.+.++..+ |+|++++.. +..+++.++++++||.+.|+..|. .++++||+++.+++ +.+
T Consensus 272 ~---~~~~~~~~~-f~~~~~~~~------------~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~ 335 (346)
T TIGR03576 272 K---LNVERTPTG-FVIKGVEEE------------KLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDD 335 (346)
T ss_pred h---CCCCcCCCe-EEEEeCCCC------------CHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHH
Confidence 4 444443444 688888642 455666777777899999998773 47899999999765 899
Q ss_pred HHHHHHHHHH
Q 018665 334 AAVERIKKGL 343 (352)
Q Consensus 334 ~~~~~l~~~~ 343 (352)
++++.|++.+
T Consensus 336 ~~~~al~~~~ 345 (346)
T TIGR03576 336 YLVEAVKDSL 345 (346)
T ss_pred HHHHHHHhcc
Confidence 9999998765
No 111
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=8.4e-31 Score=237.19 Aligned_cols=290 Identities=16% Similarity=0.191 Sum_probs=223.1
Q ss_pred HHHHHHHHhcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLKENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+.++++++ .++ +.+++++|+++++..++.++.++|++|+++.++|++ +...++..|.+++.++.++ ++.+
T Consensus 39 ~~la~~~g-----~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~ 111 (356)
T cd06451 39 EGLRYVFQ-----TENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPW--GEAV 111 (356)
T ss_pred HHHHHHhc-----CCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCC--CCCC
Confidence 88888886 434 457889999999999999999999999999988876 4577888999999999864 3568
Q ss_pred CHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 98 DPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 98 d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|++++++.+++ +++++++++++||+|...| +++|.++|+++ |+++++|++++. |..+.++.. .+..+
T Consensus 112 ~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~-~~~li~D~~~~~----g~~~~~~~~----~~~d~ 179 (356)
T cd06451 112 SPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH-DALLIVDAVSSL----GGEPFRMDE----WGVDV 179 (356)
T ss_pred CHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc-CCEEEEeeehhc----cCccccccc----cCccE
Confidence 99999999986 8999999999999999999 88899999999 999999999863 222222222 23347
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHh---hhh----------------ccccCCChHHHHHHHHHhcccCCChHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNK---IQS----------------QFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~---~~~----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
++.|.+|+++ .+.++|+++.++++++.+.. ... ....+++...+.++.++++.. ....
T Consensus 180 ~~~s~~K~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l--~~~~ 256 (356)
T cd06451 180 AYTGSQKALG-APPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLI--LEEG 256 (356)
T ss_pred EEecCchhcc-CCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHH--HHhh
Confidence 7889999997 44578999999998887753 000 122345555556666666541 1345
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~ 314 (352)
++++.++.+++++++.+.|++. |+++..+. .+.++++.+++.. +..++++.|.+++||.+.+|..
T Consensus 257 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gI~~~~g~~ 324 (356)
T cd06451 257 LENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPEGV-----------DGDEVVRRLMKRYNIEIAGGLG 324 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECCCCC-----------CHHHHHHHHHHhCCEEEecccc
Confidence 6777888899999999999987 87776432 3445567766432 6789999998776999999876
Q ss_pred CCCCCeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 315 FGDDTCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 315 ~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
+..++++|++++. +++|++++++.|+++++
T Consensus 325 ~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 325 PTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred cccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 5556799999986 88999999999998763
No 112
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=4.2e-31 Score=245.41 Aligned_cols=317 Identities=21% Similarity=0.265 Sum_probs=234.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
+|++..++.+++ +++|++++ .++.|++++|.+ ++..++.++++++|.|++....|.++...++..+.
T Consensus 149 ~yg~~~~~~~Le------e~La~~~~------~~~~i~~s~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~ 215 (481)
T PLN02822 149 FYGTIDVHLDCE------TKIAKFLG------TPDSILYSYGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRS 215 (481)
T ss_pred cccCHHHHHHHH------HHHHHHhC------CCCEEEECCHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCC
Confidence 567777788999 99999996 567888888776 57889999999999999998888888888888999
Q ss_pred eEEEecccCCCCcccCHHHHHhhc--cCCe-eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKL--TEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l--~~~~-~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
+++.++.++.+++..+++++++.. ++++ ++|+++.+++++|.+.| +++|.++|++| |+++|+||+|+...++.
T Consensus 216 ~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~-~~~LIvDEa~s~gvlG~ 291 (481)
T PLN02822 216 TIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKY-RFRVLLDESNSFGVLGK 291 (481)
T ss_pred eEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHc-CCEEEEECCccccccCC
Confidence 999998653333333333333322 1234 68888888999999999 99999999999 99999999999655542
Q ss_pred CCcc--ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCC--hHHHHHHHHHhcccCCCh
Q 018665 160 ATHT--SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGAS--SISQKAGVAALGLGYAGG 235 (352)
Q Consensus 160 ~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~ 235 (352)
.... ....+.. .+.+++++|+||.+|+.| ||+++++++++.++.....++++.+ ++.+.++.++++. .
T Consensus 292 ~G~G~~e~~~v~~-~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~----l 363 (481)
T PLN02822 292 SGRGLSEHFGVPI-EKIDIITAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV----L 363 (481)
T ss_pred CCCChHHHcCCCC-CCCeEEEecchhhhhhCC---eEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHH----H
Confidence 2111 1111111 245689999999998777 9999999999988755544455444 6677777788864 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC-
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA- 314 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~- 314 (352)
+...+++++++++++++.+.|++.+|+.+..+..++++++.+++..+..... .....+++++|++++||.+.++..
T Consensus 364 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~---~~~~~~~~~~Ll~e~GV~v~~~~~~ 440 (481)
T PLN02822 364 EDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKED---LSLLEHIADRMLKEDSVLVVVSKRS 440 (481)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccch---HHHHHHHHHHHHhcCCEEEEeeCCC
Confidence 2235778899999999999999877888877788888888886421100000 001367899998666999997632
Q ss_pred -CC---CCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 315 -FG---DDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 315 -~~---~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+. .+.++|++++. +++||++++++|++++.++.
T Consensus 441 ~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 441 TLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred CcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 22 14579998774 99999999999999988754
No 113
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1.1e-30 Score=240.26 Aligned_cols=290 Identities=19% Similarity=0.222 Sum_probs=222.5
Q ss_pred HHHHHHHHhcCCCCC-CCcEEEeCChHHHHHHHHHHh----cCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccC
Q 018665 21 QQFVINLKENGLSYT-PDQILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRI 91 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l----~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~ 91 (352)
+.++++++ .+ +++|++++|+++++..++.++ .++|++|+++++.|.+.. ..++..|.+++.++++
T Consensus 69 ~~ia~~~~-----~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~- 142 (403)
T TIGR01979 69 EKVAKFIN-----AASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD- 142 (403)
T ss_pred HHHHHHhC-----cCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC-
Confidence 88888886 44 579999999999999888875 578999999999887644 4566789999999987
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
.++.+|++++++.++++++++++++++||||..+| +++|.++|+++ |+++++|++++.. ..+..+..
T Consensus 143 -~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~g----~~~~~~~~---- 209 (403)
T TIGR01979 143 -DDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNP---VEEIAKLAHQV-GAKVLVDGAQAVP----HMPVDVQA---- 209 (403)
T ss_pred -CCCCCCHHHHHHHhccCCeEEEEEcccccccccCC---HHHHHHHHHHc-CCEEEEEchhhcC----ccccCccc----
Confidence 34558999999999999999999999999999999 89999999999 9999999998752 22222221
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhhh---------------------hccccCCChHHHHHHHHHhcc
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~ 230 (352)
.+.++++.|++|.+|.+| +|++++++++++.+.... .....+++.....++.++++.
T Consensus 210 ~~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~ 287 (403)
T TIGR01979 210 LDCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDY 287 (403)
T ss_pred cCCCEEEEecccccCCCC--ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHH
Confidence 245699999999887444 899999988777653211 111234566666677776654
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccC
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 306 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 306 (352)
. .....+.+.++..++++.+.+.|+++++++++.+. .+.++.+.+++. +..++.+.|.++ |
T Consensus 288 ~--~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~------------~~~~~~~~L~~~-g 352 (403)
T TIGR01979 288 L--EAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGV------------HPHDVGTILDEE-G 352 (403)
T ss_pred H--HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCc------------CHHHHHHHHhhC-C
Confidence 1 12235677888899999999999988888887653 134455666643 567888777754 9
Q ss_pred EEeccCCCC--------CCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 307 VALVPGDAF--------GDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 307 i~i~~g~~~--------~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
|.+.+|..+ +.++++|+|++. +++|++++++.|+++++.+
T Consensus 353 I~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 353 IAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 999887633 346799999997 8899999999999988765
No 114
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.5e-30 Score=239.71 Aligned_cols=317 Identities=15% Similarity=0.136 Sum_probs=236.2
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
+.|++..|..++| ++++++++ .+++++|+|+++|+..++.+++++|| |++++|.|..+...++..|
T Consensus 72 ~~Y~~~~g~~~Lr------eaia~~~~-------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G 137 (460)
T PRK13238 72 EAYAGSRSYYRLE------DAVKDIFG-------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNG 137 (460)
T ss_pred cccCCCCCHHHHH------HHHHHHhC-------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcC
Confidence 4699999999999 99999985 56899999999999999999999999 9999999999999999999
Q ss_pred CeEEEecccCC------CCcc--cCHHHHHhhcc----CCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 82 ATPVILPTRIS------ENFL--LDPKVLESKLT----EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 82 ~~v~~i~~~~~------~~~~--~d~~~l~~~l~----~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.+++.+++++. +++. +|+++|++.++ +++++|++++|+||+| ++++.+++++|.++|+++ |+++|+
T Consensus 138 ~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~-gi~li~ 216 (460)
T PRK13238 138 ATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY-GIPVVI 216 (460)
T ss_pred CEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEE
Confidence 99999998642 2444 99999999997 3689999999999997 999999999999999999 999999
Q ss_pred cccccc--cccC-----CCCccccccCCC--CCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhh----hcccc
Q 018665 149 DEIYEH--IIYA-----PATHTSFASLPG--MWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQ----SQFTS 214 (352)
Q Consensus 149 D~~~~~--~~~~-----~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~----~~~~~ 214 (352)
|+++.. ..+. +....++..+.. ...-..+..|..|... .+. .|+++++ ++++++++... ...++
T Consensus 217 Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~-~~~-GG~i~~~d~~l~~~~~~~~~~~~g~~t~ 294 (460)
T PRK13238 217 DAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM-VNI-GGLLCFRDEDLFTECRTLCILYEGFPTY 294 (460)
T ss_pred ECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCC-Ccc-eeEEEcChHHHHHHhhhcccccCCcccc
Confidence 997742 2221 112233322100 0011245555666542 222 3677777 57888877653 22233
Q ss_pred CC-ChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCC-cccCCCCCC
Q 018665 215 GA-SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFGKIE 292 (352)
Q Consensus 215 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~ 292 (352)
+. +...+.+++.++.... ..++++.. .+++++|.+.|++. |+.+..|.+|+++++++.+.... ...++
T Consensus 295 ~g~~~~~~~Ala~~l~e~~-~~~~~~~~----~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~---- 364 (460)
T PRK13238 295 GGLAGRDMEALAVGLYEGM-DEDYLAYR----IGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIPAEQF---- 364 (460)
T ss_pred cCcHHHHHHHHHhhHHHhh-ChHHHHHH----HHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhcCCCCCCCCC----
Confidence 33 5555777777665311 13333333 33568899999887 99999999999999998653211 11111
Q ss_pred ChHHHHHHHHHccCEEeccCCCCCC-------------CCeEEEEeec---CHHHHHHHHHHHHHHHhh
Q 018665 293 NSESLCRYLLDKAQVALVPGDAFGD-------------DTCIRISYAA---SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~~~-------------~~~iRi~~~~---~~~~l~~~~~~l~~~~~~ 345 (352)
.+.+++.+|+++.||.+.|++.|.. ...+|++++. +.+.++.+.++|++..+.
T Consensus 365 ~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 365 PAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred chHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999886642 2589999998 999999999999988743
No 115
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=8.6e-31 Score=242.07 Aligned_cols=292 Identities=17% Similarity=0.195 Sum_probs=225.5
Q ss_pred HHHHHHHHhcCCCCC-CCcEEEeCChHHHHHHHHHHh----cCCCCEEEecCCCCCCh----HHHHHhcCCeEEEecccC
Q 018665 21 QQFVINLKENGLSYT-PDQILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRI 91 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l----~~~~~~vl~~~~~~~~~----~~~~~~~g~~v~~i~~~~ 91 (352)
+.++++++ .. +++|++++|+|++++.++.++ +++|++|+++.+.|++. ...++..|.+++.++++.
T Consensus 83 ~~la~~~~-----~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~ 157 (424)
T PLN02855 83 KKVAAFIN-----ASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTP 157 (424)
T ss_pred HHHHHHcC-----CCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 88999887 43 479999999999999988763 57899999999988754 455677899999999864
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
+ ..+|++++++.+++++++|++++++||||..+| +++|+++|+++ |+++++|++|+. +..+..+..
T Consensus 158 ~--~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~---~~~I~~l~~~~-g~~vivD~a~~~----g~~~~~~~~---- 223 (424)
T PLN02855 158 D--EVLDVEQLKELLSEKTKLVATHHVSNVLGSILP---VEDIVHWAHAV-GAKVLVDACQSV----PHMPVDVQT---- 223 (424)
T ss_pred C--CCcCHHHHHHHhccCceEEEEeCccccccccCC---HHHHHHHHHHc-CCEEEEEhhhhc----CCcCCCchh----
Confidence 3 348999999999889999999999999999999 88999999999 999999999864 222222222
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhh---------------------hhccccCCChHHHHHHHHHhcc
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI---------------------QSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
.+.++++.|++|.+|.+ ++|++++++++++.+... .+...++++.....++.++++.
T Consensus 224 ~~~d~~~~s~~K~~gp~--G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~ 301 (424)
T PLN02855 224 LGADFLVASSHKMCGPT--GIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDY 301 (424)
T ss_pred cCCCEEEeecccccCCC--ccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHH
Confidence 23458899999977633 489999998887765422 0112234566666666667654
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC------CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
. .....+++.++.++.++++.+.|+++++++++.+. .+.++.+.+++. +..++.+.|.++
T Consensus 302 ~--~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~------------~~~~v~~~L~~~ 367 (424)
T PLN02855 302 L--SEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI------------HPTDLSTFLDQQ 367 (424)
T ss_pred H--HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc------------CHHHHHHHhccc
Confidence 1 13357788888999999999999988888887532 234466677653 677899998876
Q ss_pred cCEEeccCCCCC--------CCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 305 AQVALVPGDAFG--------DDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 305 ~gi~i~~g~~~~--------~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+||.+..|..|. .++++|+|++. +++|++++++.|+++++.++
T Consensus 368 ~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 368 HGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred CCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 699999887553 24789999997 89999999999999997754
No 116
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=1.7e-30 Score=238.91 Aligned_cols=288 Identities=15% Similarity=0.149 Sum_probs=223.2
Q ss_pred HHHHHHHHhcCCCC-CCCcEEEeCChHHHHHHHHHH----hcCCCCEEEecCCCCCCh----HHHHHhcCCeEEEecccC
Q 018665 21 QQFVINLKENGLSY-TPDQILVSNGAKQSILQAVLA----VCSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRI 91 (352)
Q Consensus 21 ~~ia~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~----l~~~~~~vl~~~~~~~~~----~~~~~~~g~~v~~i~~~~ 91 (352)
+.+|++++ . ++++|++|+|+|++++.++.+ ++++||+|+++++.|++. ...++..|.+++.++++.
T Consensus 74 ~~la~~~~-----~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 148 (406)
T PRK09295 74 KQAALFIN-----ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP 148 (406)
T ss_pred HHHHHHcC-----cCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC
Confidence 88888886 4 468999999999999988876 457899999999888754 456678899999999863
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
++.+|+++|+++++++++++++++|+||||..+| +++|.++|+++ |+++++|++|+.. ..+..+..
T Consensus 149 --~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~---~~~i~~~~~~~-~~~vivD~a~~~g----~~~~~~~~---- 214 (406)
T PRK09295 149 --DGTLQLETLPALFDERTRLLAITHVSNVLGTENP---LAEMIALAHQH-GAKVLVDGAQAVM----HHPVDVQA---- 214 (406)
T ss_pred --CCCCCHHHHHHhcCCCcEEEEEecchhcccccCC---HHHHHHHHHHc-CCEEEEEcccccC----ccccCchh----
Confidence 4458999999999889999999999999999999 89999999999 9999999998752 22222222
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhh----------------------hhccccCCChHHHHHHHHHhc
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI----------------------QSQFTSGASSISQKAGVAALG 229 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~l~ 229 (352)
.+.++++.|++|.+|.+| +|++++++++++.+... .+...++++.....++.++++
T Consensus 215 ~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~ 292 (406)
T PRK09295 215 LDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALD 292 (406)
T ss_pred cCCCEEEeehhhccCCCC--cEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHH
Confidence 344589999999877444 89999998887664311 112234678888888888886
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC-CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
.. .....+++.++.+++++++.+.|++++++++..+. ...++.+.+++. ++.++.+.|. ++||.
T Consensus 293 ~~--~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~------------~~~~~~~~L~-~~gI~ 357 (406)
T PRK09295 293 YV--SALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKH------------HAYDVGSFLD-NYGIA 357 (406)
T ss_pred HH--HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCc------------CHHHHHHHHH-hCCeE
Confidence 51 12245677788888999999999988888887643 223345556543 6778888776 45999
Q ss_pred eccCCCCC--------CCCeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 309 LVPGDAFG--------DDTCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 309 i~~g~~~~--------~~~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
+..|..|. .++++|+|++. +++|++++++.|+++.+
T Consensus 358 v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 358 VRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred EeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 99887553 24689999998 88999999999998754
No 117
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=1.7e-30 Score=235.63 Aligned_cols=293 Identities=13% Similarity=0.140 Sum_probs=216.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 100 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~ 100 (352)
+.+|++++ .+.+.+++|+++++..++.+++++||.|+++.+.|.+....++..|.+++.++.+.+.++.+|++
T Consensus 58 e~lA~~~g-------~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 130 (370)
T TIGR02539 58 EDLAEFLG-------MDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPE 130 (370)
T ss_pred HHHHHHhC-------CCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHH
Confidence 88999985 34667799999999999999999999999999998887788899999999999875556779999
Q ss_pred HHHhhccC-------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 101 VLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 101 ~l~~~l~~-------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
.|++.+++ ++++|++++|+||+|...| +++|.++|+++ |+++|+|++|+... .+..... .+
T Consensus 131 ~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~-~~~livDea~~~g~----~~~~~~~----~~ 198 (370)
T TIGR02539 131 GYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREK-GVPLLLNCAYTVGR----MPVSAKE----IG 198 (370)
T ss_pred HHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHc-CCeEEEECccccCC----cCCCHHH----cC
Confidence 99999852 6789999999999999999 88999999999 99999999998631 1111111 23
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcccc--------CCChHHHHHHHHHhcccCCChHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS--------GASSISQKAGVAALGLGYAGGEVVSKMVKAF 245 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (352)
..++++|+||+++ ++.|+||+++++++++.+......+.. +.....+.++.++++. ..+.+++..+.+
T Consensus 199 ~di~v~s~sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~l~~~~~~~ 274 (370)
T TIGR02539 199 ADFIVGSGHKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH---VVERVKRWDEEV 274 (370)
T ss_pred CCEEEeeCccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 4578899999998 566899999999999988766543322 1122244455555542 134444444444
Q ss_pred HHHHHHHHHHhcccCCceec--CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE-eccCCCCCCCCeEE
Q 018665 246 RERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA-LVPGDAFGDDTCIR 322 (352)
Q Consensus 246 ~~~~~~l~~~l~~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~-i~~g~~~~~~~~iR 322 (352)
+. ++++.+.|+++ |+.++ .+..++++++++|.... ...+ ....+..+.+.|.++ ||. +.++ .++++|
T Consensus 275 ~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~-~~~~--~~~~~~~~~~~L~e~-GI~~ir~~----~~~~iR 344 (370)
T TIGR02539 275 KK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE-IAQK--HKRRGYFLYEELKKR-GIHGIRSG----QTKYFK 344 (370)
T ss_pred HH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH-Hhhh--hccccHHHHHHHHhC-CCccccCC----cceEEE
Confidence 44 45899999988 77763 35667778888763200 0000 001345788888876 886 5543 357999
Q ss_pred EEeec-CHHHHHHHHHHHHHHHhhh
Q 018665 323 ISYAA-SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 323 i~~~~-~~~~l~~~~~~l~~~~~~~ 346 (352)
+++.. ++++++++++.|+++++++
T Consensus 345 is~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 345 LSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred EEecCCCHHHHHHHHHHHHHHHHhc
Confidence 99633 8999999999999988753
No 118
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-30 Score=230.84 Aligned_cols=294 Identities=22% Similarity=0.246 Sum_probs=239.4
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCC-CCcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChH----HHHHhcC
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYT-PDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYP----EMARIAD 81 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~----~~~~~~g 81 (352)
+++.| +.+|++++ .+ .++|++|+|+|++++.+..++ .++||+|++..-.|++.. ...++.|
T Consensus 68 ~e~aR------e~va~~~~-----a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~G 136 (405)
T COG0520 68 YEAAR------EAVARFLN-----ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTG 136 (405)
T ss_pred HHHHH------HHHHHHhC-----CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcC
Confidence 35677 99999997 66 489999999999999999998 688999999999988655 5556779
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.+|++ +++.++++.+++.+++++++|.+++.+|.||++.| +++|+++|+++ |+++++|.+++. ++.
T Consensus 137 a~v~~i~~~--~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~p---v~~I~~la~~~-ga~v~VDaaq~~----~h~ 206 (405)
T COG0520 137 AKVRVIPLD--DDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNP---VKEIAELAHEH-GALVLVDAAQAA----GHL 206 (405)
T ss_pred cEEEEEecC--CCCCcCHHHHHHhcCCCceEEEEECccccccccch---HHHHHHHHHHc-CCEEEEECcccc----Ccc
Confidence 999999998 44568999999999999999999999999999999 99999999999 999999999986 444
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh----------------------hhccccCCChH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI----------------------QSQFTSGASSI 219 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 219 (352)
+..+..+ +.++++.|.+|+++.| .++|++++++++++.+... ......+++..
T Consensus 207 ~idv~~l----~~Df~afsgHKwl~gP-~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~ 281 (405)
T COG0520 207 PIDVQEL----GCDFLAFSGHKWLLGP-TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIA 281 (405)
T ss_pred CCCchhc----CCCEEEEcccccccCC-CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHH
Confidence 4444443 4559999999966424 4699999999999886211 11223467777
Q ss_pred HHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHH
Q 018665 220 SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 220 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
...++.++++.. ....++++.++.+++.+++.+.|+++|+++++.+. .+-.+.+.+++. .+.+
T Consensus 282 ~~i~l~aAl~~~--~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~------------~~~d 347 (405)
T COG0520 282 GAIGLAAALDYL--LEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI------------HPHD 347 (405)
T ss_pred HHHhHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC------------CHHH
Confidence 777777777642 24457788889999999999999999999999764 345566677664 7999
Q ss_pred HHHHHHHccCEEeccCCCCCC--------CCeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 297 LCRYLLDKAQVALVPGDAFGD--------DTCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~~~~~--------~~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
++..|.++ ||.++.|..|.. +..+|+|++. ++||++++++.|+++.+
T Consensus 348 v~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 348 VATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHhC-CeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 99998877 799999987754 3469999998 99999999999999864
No 119
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=3.1e-30 Score=218.73 Aligned_cols=331 Identities=24% Similarity=0.386 Sum_probs=252.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
-|..+.|.+-+| +.+|+|+. |.|++.++++|++|.|++.++..++..++ .+.+.|++|-|.|+-|...+...
T Consensus 108 aYS~SqGv~~vR------~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~ 181 (475)
T KOG0258|consen 108 AYSDSQGVPGVR------KHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLL 181 (475)
T ss_pred ccccccCChhHH------HHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHh
Confidence 488899999999 99999999 88988999999999999999999998875 46689999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC-----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
|...+.+-++++.+|.+|.++|++.+++ +++++++.||.||||++++.+.+++|+.+|.++ ++.++.||+|.+.
T Consensus 182 ~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~-~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 182 GGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE-GLVLLADEVYQDN 260 (475)
T ss_pred CCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc-CeEEechHHHHhh
Confidence 9999999999999999999999998853 789999999999999999999999999999999 9999999999988
Q ss_pred ccCCC-CccccccC----CCCCC-c--eEEEecccccc-ccccceeEEEE---cChhHHHHHHhhhhccccCCChHHHHH
Q 018665 156 IYAPA-THTSFASL----PGMWE-R--TLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQSQFTSGASSISQKA 223 (352)
Q Consensus 156 ~~~~~-~~~~~~~~----~~~~~-~--~i~~~s~sK~~-g~~g~~~g~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
.|.+. ...|+.+. ...+. + .+...|.||.+ |-.|.|.||+- .+++..+.+.+... ....++..+|..
T Consensus 261 vy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s-i~lc~~V~GQ~~ 339 (475)
T KOG0258|consen 261 VYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS-IKLCPQVSGQKL 339 (475)
T ss_pred ccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHh-hhhcCCccchhh
Confidence 88653 44454442 22222 2 35577889987 66789999985 35566555554432 224566667766
Q ss_pred HHHHhcccCCCh-------HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEee--cCCccCCcccCCCCCCCh
Q 018665 224 GVAALGLGYAGG-------EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID--FSTYYGSEAEGFGKIENS 294 (352)
Q Consensus 224 ~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~ 294 (352)
.-....-..-.+ ..-..+...++.+...+.+.++.++|+.+.++++.+|.+.+ +|...-...+..+ ....
T Consensus 340 vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~-~~PD 418 (475)
T KOG0258|consen 340 VDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALG-IAPD 418 (475)
T ss_pred hceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhC-CCCc
Confidence 666655422111 22345666788889999999999999999999999998865 4433211111110 0122
Q ss_pred HHHHHHHHHccCEEeccCCCCCCC-C--eEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 295 ESLCRYLLDKAQVALVPGDAFGDD-T--CIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~~~~~-~--~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
.=.+..|++..||.++||++|+.. + ++|..+-.+. + ..+++++++-.+
T Consensus 419 ~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~ 469 (475)
T KOG0258|consen 419 EFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAE 469 (475)
T ss_pred HHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHH
Confidence 235678888999999999999864 3 5787776633 3 555555555443
No 120
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=1.9e-29 Score=228.44 Aligned_cols=292 Identities=15% Similarity=0.173 Sum_probs=212.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 100 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~ 100 (352)
+.++++++ . +++++++|+++++..++.+++++||+|+++.++|.+....++..|.+++.++++.+.++.+|++
T Consensus 51 ~~la~~~g-----~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 123 (361)
T cd06452 51 HDLAEFLG-----M--DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPE 123 (361)
T ss_pred HHHHHHcC-----C--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHH
Confidence 99999986 3 8899999999999999999999999999999999888888999999999999876555679999
Q ss_pred HHHhhcc-------CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 101 VLESKLT-------EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 101 ~l~~~l~-------~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
.++++++ ++++++++++|+||+|...+ +++|+++|+++ |+++|+|++|+. +..+.+... .+
T Consensus 124 ~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~i~~~~~~~-~~~vivD~a~~~----g~~~~~~~~----~~ 191 (361)
T cd06452 124 GYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKKIAKVCHEY-GVPLLLNGAYTV----GRMPVSGKE----LG 191 (361)
T ss_pred HHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHHHHHHHHHc-CCeEEEECCccc----CCcCCCHHH----cC
Confidence 9999885 36889999999999999988 89999999999 999999999974 221122222 24
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccc--------cCCChHHHHHHHHHhcccCCChHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT--------SGASSISQKAGVAALGLGYAGGEVVSKMVKAF 245 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (352)
.++++.|+||+++ ++.|+|++++++++++++.+....+. .+.+...+.++.++++. ..+..+... +.
T Consensus 192 ~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~-~~ 266 (361)
T cd06452 192 ADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPH---VKERVKRWD-EE 266 (361)
T ss_pred CCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHH---HHHHHHHHH-HH
Confidence 5699999999998 56699999999999998866443221 11222233344444432 123333322 23
Q ss_pred HHHHHHHHHHhcccCCceecC--CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEE
Q 018665 246 RERRDFLVKSFGELEGVKMSE--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 323 (352)
Q Consensus 246 ~~~~~~l~~~l~~~~g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi 323 (352)
.++++++.+.|++++|++++. +....++.++.+........ ...++.++.++|.++ ||.+.. .+...++|+
T Consensus 267 ~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~~~~~~~L~~~-gI~~~~---~~~~~~~ri 339 (361)
T cd06452 267 VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKK---HKRRGYFLYSELKKR-GIHGIK---PGLTRYFKL 339 (361)
T ss_pred HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhh---ccccchhHHHHHHHc-CceEEc---CCCceEEEE
Confidence 345578899999988888862 33444566665521000000 001345799999876 888532 234568999
Q ss_pred Eeec-CHHHHHHHHHHHHHHH
Q 018665 324 SYAA-SLTTLQAAVERIKKGL 343 (352)
Q Consensus 324 ~~~~-~~~~l~~~~~~l~~~~ 343 (352)
+... ++++++.+++.|+++.
T Consensus 340 ~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 340 STYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EecCCCHHHHHHHHHHHHHHh
Confidence 9955 8899999999998765
No 121
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=1.3e-29 Score=230.01 Aligned_cols=280 Identities=16% Similarity=0.157 Sum_probs=211.3
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 100 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~ 100 (352)
+.++++++ .++.|++++|+ +++..++.+++++||+|+++.|+|..+...++..|.+++.++. .|++
T Consensus 68 ~~la~~~~------~~~~i~~~~G~-~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~ 133 (360)
T TIGR00858 68 EELAEWKG------TEAALLFSSGY-LANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVE 133 (360)
T ss_pred HHHHHHhC------CCCEEEECchH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHH
Confidence 88888775 45677777775 5555577888899999999999999999999999999888763 4788
Q ss_pred HHHhhccC----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc--cccccCCCCCCc
Q 018665 101 VLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFASLPGMWER 174 (352)
Q Consensus 101 ~l~~~l~~----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~--~~~~~~~~~~~~ 174 (352)
.+++.++. +++++++.+++|++|...+ +++|.++|+++ |+++|+||+|+.+.+..... .+...+.. .++
T Consensus 134 ~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~ 208 (360)
T TIGR00858 134 HLERLLEKNRGERRKLIVTDGVFSMDGDIAP---LPQLVALAERY-GAWLMVDDAHGTGVLGEDGRGTLEHFGLKP-EPV 208 (360)
T ss_pred HHHHHHHHcccCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHc-CcEEEEECcccccCcCCCCCchHHhcCCCc-cCC
Confidence 88888853 4678888889999999999 89999999999 99999999998654432211 11222221 367
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+++++|+||.+|++| ||+++++++++.+......+ +.+.++..+.++.++++. ....++.+++++++++.+
T Consensus 209 ~i~i~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l 281 (360)
T TIGR00858 209 DIQVGTLSKALGSYG---AYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALEL----IQEEPWRREKLLALIARL 281 (360)
T ss_pred cEEEEechhhhhccC---cEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHH----HhhCHHHHHHHHHHHHHH
Confidence 899999999998655 99999999988876543322 234555556666677754 223356778999999999
Q ss_pred HHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---CCCeEEEEeec--
Q 018665 253 VKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA-- 327 (352)
Q Consensus 253 ~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~~~~iRi~~~~-- 327 (352)
.+.|+++ ++.+. +..+.++|+.+++.. ++.++.+.|.++ ||.+.++..+. ..+++|++++.
T Consensus 282 ~~~L~~~-~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~iRis~~~~~ 347 (360)
T TIGR00858 282 RAGLEAL-GFTLM-PSCTPIVPVIIGDNA-----------SALALAEELQQQ-GIFVGAIRPPTVPAGTSRLRLTLSAAH 347 (360)
T ss_pred HHHHHHc-CCccC-CCCCCEEEEEeCCHH-----------HHHHHHHHHHHC-CeeEeeeCCCCCCCCCceEEEEEcCCC
Confidence 9999987 67665 445667888876431 577899998865 99998765443 24589999996
Q ss_pred CHHHHHHHHHHHH
Q 018665 328 SLTTLQAAVERIK 340 (352)
Q Consensus 328 ~~~~l~~~~~~l~ 340 (352)
+++|+++++++|+
T Consensus 348 ~~~~i~~~l~~l~ 360 (360)
T TIGR00858 348 TPGDIDRLAEALK 360 (360)
T ss_pred CHHHHHHHHHhhC
Confidence 8899999998874
No 122
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=7.6e-30 Score=232.90 Aligned_cols=294 Identities=13% Similarity=0.094 Sum_probs=220.6
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEecCCCCCChHH---HHHhcCCeEEEecccC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC----SPGDEVIIPAPFWVSYPE---MARIADATPVILPTRI 91 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~ 91 (352)
+++.++++++ .++++|++++|+++++..++.++. ++++.|+++...|+++.. .++..|.+++.++++
T Consensus 48 ~r~~la~~~g-----~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~- 121 (381)
T PRK02948 48 CRKTFAEMIG-----GEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD- 121 (381)
T ss_pred HHHHHHHHhC-----CCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC-
Confidence 3388888886 678899999999999998888775 567899998877776554 467789999999986
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
.++.+|++++++.++++++++++++|+||||.++| +++|.++|+++ |+++++|++++. +..+..+. .
T Consensus 122 -~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~-~~~vivD~~~~~----g~~~~~~~----~ 188 (381)
T PRK02948 122 -KSGLIRLVDLERAITPDTVLASIQHANSEIGTIQP---IAEIGALLKKY-NVLFHSDCVQTF----GKLPIDVF----E 188 (381)
T ss_pred -CCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh---HHHHHHHHHHc-CCEEEEEChhhc----cccccCcc----c
Confidence 33568999999999888999999999999999999 88999999999 999999987754 21112221 2
Q ss_pred CCceEEEeccccccccccceeEEEEcChhH-HHHHHh----hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNK----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
.+.++++.|++|.+|.+| +|++++++++ +..... ......+++|.+.+.++.++++. ..++.++.+++++
T Consensus 189 ~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~---~~~~~~~~~~~~~ 263 (381)
T PRK02948 189 MGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAEN---ILKNMQEESLRFK 263 (381)
T ss_pred CCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 356689999999988666 7888877664 111110 01123457899999999999875 2356788889999
Q ss_pred HHHHHHHHHhcccCCceecCCC-Cce----EEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC----
Q 018665 247 ERRDFLVKSFGELEGVKMSEPQ-GAF----YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---- 317 (352)
Q Consensus 247 ~~~~~l~~~l~~~~g~~~~~~~-~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~---- 317 (352)
++++++.+.|+++ ++++.... ..+ ++.+.++.. ++.++...|.+ .||.+..|..|..
T Consensus 264 ~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~l~~-~gI~v~~g~~c~~~~~~ 329 (381)
T PRK02948 264 ELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGI------------EGQYTMLECNR-RGIAISTGSACQVGKQE 329 (381)
T ss_pred HHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCC------------CHHHHHHhccc-CCEEEEchHhcCCCCCC
Confidence 9999999999988 65544221 111 122222321 56778877765 5999998875421
Q ss_pred ---------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCCCC
Q 018665 318 ---------------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRPGV 350 (352)
Q Consensus 318 ---------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~~~ 350 (352)
.+++|+|++. +++|++++++.|+++++.+-+++
T Consensus 330 p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~~~ 379 (381)
T PRK02948 330 PSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYRGV 379 (381)
T ss_pred CCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence 3689999987 88999999999999998776654
No 123
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=1.8e-29 Score=229.89 Aligned_cols=283 Identities=17% Similarity=0.208 Sum_probs=216.7
Q ss_pred HHHHHHHHhcCCCCC-CCcEEEeCChHHHHHHHHHHhcC---CCCEEEecCCCCCChH----HHHHhcCCeEEEecccCC
Q 018665 21 QQFVINLKENGLSYT-PDQILVSNGAKQSILQAVLAVCS---PGDEVIIPAPFWVSYP----EMARIADATPVILPTRIS 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~~---~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~ 92 (352)
+.++++++ .+ ++++++++|++++++.++.++.. +|++|++++++|.+.. ..++..|.+++.++.+
T Consensus 50 ~~la~~~~-----~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 122 (373)
T cd06453 50 EKVARFIN-----APSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD-- 122 (373)
T ss_pred HHHHHHhC-----CCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--
Confidence 88888886 44 67999999999999999999877 8899999999998853 3455789999999986
Q ss_pred CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCC
Q 018665 93 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 172 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
.++.+|++.+++.++++++++++++++||||...| +++|.++|+++ |+++++|++++.. ..+..+.. .
T Consensus 123 ~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~-~~~li~D~a~~~~----~~~~~~~~----~ 190 (373)
T cd06453 123 DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---VKEIGEIAHEA-GVPVLVDGAQSAG----HMPVDVQD----L 190 (373)
T ss_pred CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---HHHHHHHHHHc-CCEEEEEhhhhcC----ceeeeccc----c
Confidence 34568999999999889999999999999999999 88999999999 9999999998742 21222222 2
Q ss_pred CceEEEeccccccccccceeEEEEcChhHHHHHHhhhh---------------------ccccCCChHHHHHHHHHhccc
Q 018665 173 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS---------------------QFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 173 ~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~ 231 (352)
+.++++.|++|.++ + .++|++++++++++.+..... ....+++.....++.++++..
T Consensus 191 ~~d~~~~s~~K~~~-~-~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l 268 (373)
T cd06453 191 GCDFLAFSGHKMLG-P-TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYL 268 (373)
T ss_pred CCCEEEeccccccC-C-CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHH
Confidence 34478889999997 3 568999999998887654321 111245555555555555431
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC--CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 232 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
.....++++++.+++++++.+.|++++++++..+. .+.++++.+++. +..++.+.|.++ ||.+
T Consensus 269 --~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~~l~~~-gi~i 333 (373)
T cd06453 269 --EKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI------------HPHDVATILDQY-GIAV 333 (373)
T ss_pred --HHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc------------CHHHHHHHHHHC-CEEe
Confidence 12345777888888999999999998888876322 244566666543 678899988864 9999
Q ss_pred ccCCCC--------CCCCeEEEEeec--CHHHHHHHHHHH
Q 018665 310 VPGDAF--------GDDTCIRISYAA--SLTTLQAAVERI 339 (352)
Q Consensus 310 ~~g~~~--------~~~~~iRi~~~~--~~~~l~~~~~~l 339 (352)
.+|..+ +.++++|++++. +++|++++++.|
T Consensus 334 ~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 334 RAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred ccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 877644 236799999997 999999998864
No 124
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=2.6e-29 Score=233.96 Aligned_cols=304 Identities=17% Similarity=0.169 Sum_probs=220.7
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCe
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
|+++..+.+++ +.+|++++ .++.|++++ |+.++..++.+++++||.|+++.++|.++...++..|.+
T Consensus 142 ~g~~~~~~ele------~~lA~~~g------~~~ai~~~~-G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~ 208 (489)
T PLN02483 142 GGTTKLHRELE------ELVARFVG------KPAAIVFGM-GYATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGAT 208 (489)
T ss_pred cCCcHHHHHHH------HHHHHHhC------CCcEEEECC-HHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCe
Confidence 66777788888 99999996 556666655 456666788889999999999999999999999999999
Q ss_pred EEEecccCCCCcccCHHHHHhhcc-------CC-----eeEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 84 PVILPTRISENFLLDPKVLESKLT-------EK-----SRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~-------~~-----~~~i~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
++.++.+ |++.+++.++ ++ .+++++ ....|++|...+ +++|+++|+++ |+++|+||
T Consensus 209 v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~-~~~livDE 277 (489)
T PLN02483 209 IRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKY-KAYVYLDE 277 (489)
T ss_pred EEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHc-CCEEEEEC
Confidence 9999853 3444444432 12 244444 445799999999 99999999999 99999999
Q ss_pred ccccccc--CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhc--cccCCChHHHHHHHH
Q 018665 151 IYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVA 226 (352)
Q Consensus 151 ~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 226 (352)
+|+.... +|.....+..+.. .+.+++++|+||++|+.| ||+++++++++.+...... +..++++....++.+
T Consensus 278 a~s~g~~G~~G~g~~~~~~v~~-~~~dI~~~SfSKs~g~~G---G~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~a 353 (489)
T PLN02483 278 AHSIGAVGKTGRGVCELLGVDP-ADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVIS 353 (489)
T ss_pred cCccCccCCCCCchHHhcCCCc-ccCcEEEEecchhcccCc---eEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHH
Confidence 9984322 2222222233321 356799999999998666 9999999999998865432 233345455545555
Q ss_pred Hhccc--CCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 227 ALGLG--YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 227 ~l~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
+++.- ....+...+.+++++++++++.+.|+++ |+.+..+.++..+++.+.... ...++.++|+++
T Consensus 354 aL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~~-----------~~~~~~~~Ll~~ 421 (489)
T PLN02483 354 AIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPA-----------KIPAFSRECLKQ 421 (489)
T ss_pred HHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCHH-----------HHHHHHHHHHHC
Confidence 55420 0012334556788999999999999998 887776666666666654321 456888999876
Q ss_pred cCEEeccCCCCCC---CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 305 AQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 305 ~gi~i~~g~~~~~---~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
||.+.+...... .+.+|++++. ++|++++++++|+++.+.+.-
T Consensus 422 -GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~ 469 (489)
T PLN02483 422 -NVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGI 469 (489)
T ss_pred -CcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 999987433222 3689999986 899999999999999887654
No 125
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=7.2e-29 Score=227.50 Aligned_cols=291 Identities=17% Similarity=0.180 Sum_probs=214.7
Q ss_pred hhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEeccc
Q 018665 11 LQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 90 (352)
Q Consensus 11 ~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~ 90 (352)
.+++ +.+|++++ .+++++++|+++|+..++.+++++||.|+++.+.|.++...++..+.+...++
T Consensus 86 ~~le------~~ia~~~g-------~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-- 150 (393)
T TIGR01822 86 KELE------AKIAAFLG-------TEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-- 150 (393)
T ss_pred HHHH------HHHHHHhC-------CCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC--
Confidence 5677 99999985 35777788999999999999999999999999999999988888877765443
Q ss_pred CCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 91 ISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 91 ~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
..|++++++.+++ ++++|++.+++||+|.+.| +++|+++|+++ |+++|+||+|+.... +....+
T Consensus 151 -----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~-~~~li~De~~~~g~~-~~~~~~ 220 (393)
T TIGR01822 151 -----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP---LDEICDLADKY-DALVMVDECHATGFL-GPTGRG 220 (393)
T ss_pred -----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC---HHHHHHHHHHc-CCEEEEECCccccCc-CCCCCc
Confidence 1588999888864 6788888889999999999 99999999999 999999999863222 211111
Q ss_pred cccC-CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 165 FASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 165 ~~~~-~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.... ....+.+++++|+||+++ |+|.||+++++++++.+......+ +.+.++..+.++.++++. .+..++.
T Consensus 221 ~~~~~~~~~~~di~~~s~sK~l~--g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~ 294 (393)
T TIGR01822 221 SHELCGVMGRVDIITGTLGKALG--GASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEM----LEASNEL 294 (393)
T ss_pred hHHhcCCCCCCeEEEEEChHHhh--CCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHH----HhcCHHH
Confidence 1111 111245699999999974 578999999999999887643222 223445555556666653 2234567
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC----C
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG----D 317 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~----~ 317 (352)
+++++++++++.+.|++. |+.+..+... ++.+.+++.. ++.++++.|.++ ||.+. +..+. .
T Consensus 295 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~i~~~~~~-----------~~~~l~~~L~~~-gI~v~-~~~~~~~~~~ 359 (393)
T TIGR01822 295 RDRLWANTRYFRERMEAA-GFDIKPADHP-IIPVMLYDAV-----------LAQRFARRLLEE-GIYVT-GFFYPVVPKG 359 (393)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCCCCCC-EEEEEeCCHH-----------HHHHHHHHHHHC-CeeEe-eeCCCCCCCC
Confidence 788999999999999876 7776544433 4445544321 567899999877 89887 33331 1
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
...+|++++. +++|+++++++|+++.++++
T Consensus 360 ~~~iRis~~~~~t~edi~~~~~~l~~~~~~~~ 391 (393)
T TIGR01822 360 QARIRVQISAAHTEEQLDRAVEAFTRIGRELG 391 (393)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 2469998877 89999999999999987653
No 126
>PLN02721 threonine aldolase
Probab=99.97 E-value=6.1e-29 Score=224.88 Aligned_cols=298 Identities=19% Similarity=0.305 Sum_probs=210.8
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC-CCCEEEecCCCCCChHH---HHHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWVSYPE---MARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~~~~vl~~~~~~~~~~~---~~~~~g~ 82 (352)
++...+++ +++|++++ .+.+++++++++++..++.++.+ +||+|++++|+|.+... .+...|.
T Consensus 39 ~~~~~~l~------~~la~~~~-------~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~ 105 (353)
T PLN02721 39 DPTALRLE------EEMAKIFG-------KEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGV 105 (353)
T ss_pred CHHHHHHH------HHHHHHhC-------CceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhhhcCc
Confidence 44467888 99999996 23456667777777777777776 89999999999875554 5778899
Q ss_pred eEEEecccCCCCcccCHHHHHhhcc-------CCeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLT-------EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~-------~~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+++.++.+ .++.+|++.+++.++ +++++++++++ +||+|.++|.+++++|.++|+++ |+++|+|+++..
T Consensus 106 ~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~-g~~livD~a~~~ 182 (353)
T PLN02721 106 HPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRH-GLKLHIDGARIF 182 (353)
T ss_pred eeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHc-CCEEEEEchhhh
Confidence 99999875 345689999999997 57889998775 78999999999999999999999 999999999753
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEE-EEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCC
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY-IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
.... ....+...... ....++.|+||+++. +.|+ ++.++++++.+......+..+++.....++......
T Consensus 183 ~~~~-~~~~~~~~~~~--~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--- 253 (353)
T PLN02721 183 NASV-ALGVPVHRLVK--AADSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVAL--- 253 (353)
T ss_pred cchh-hhCCCHHHHhh--hCCEEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHH---
Confidence 2110 00111111111 222556689999862 3454 678899988877665544433443333332222211
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCcee-cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
.+..+.+ ++..++++.+.+.|++++++.+ ..+..++++|++++...+ .+...++++|.+ .||.+.++
T Consensus 254 -~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~L~~-~gi~v~~~ 321 (353)
T PLN02721 254 -QENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSR---------ITAEKLCKSLEE-HGVLLMPG 321 (353)
T ss_pred -HHHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCcc---------ccHHHHHHHHHh-CCcEEecC
Confidence 2333333 3345667889999998877754 334445568888865200 167889999985 49999987
Q ss_pred CCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 313 DAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
. +.++|++++. +++|+++++++|++++..
T Consensus 322 ~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 322 N----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred C----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 3 6799999974 889999999999998764
No 127
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=4.8e-29 Score=216.83 Aligned_cols=292 Identities=21% Similarity=0.190 Sum_probs=234.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHH--hc----CCCCEEEecCCCCCChHHHHHhc---CCeEEEecccC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLA--VC----SPGDEVIIPAPFWVSYPEMARIA---DATPVILPTRI 91 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~--l~----~~~~~vl~~~~~~~~~~~~~~~~---g~~v~~i~~~~ 91 (352)
+.+|+.++ +++++|++|+|+|++.+.++.. .. +++.+|+++.-.|+...+.++.. |++|.+++++.
T Consensus 51 ~~iA~llg-----a~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~ 125 (386)
T COG1104 51 EQIAKLLG-----ADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS 125 (386)
T ss_pred HHHHHHhC-----CCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC
Confidence 99999998 8889999999999999999987 22 24679999999999998877765 99999999984
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
+..+|+++|++++++++.+|.+...||.+|++.| +++|.++|+++ ++++++|.+++. |+.+..+..+.
T Consensus 126 --~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp---I~ei~~i~k~~-~i~fHvDAvQa~----Gkipi~~~~~~-- 193 (386)
T COG1104 126 --NGLVDLEQLEEALRPDTILVSIMHANNETGTIQP---IAEIGEICKER-GILFHVDAVQAV----GKIPIDLEELG-- 193 (386)
T ss_pred --CCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---HHHHHHHHHHc-CCeEEEehhhhc----CceeccccccC--
Confidence 5569999999999999999999999999999999 99999999999 999999999986 55555544433
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHH--HHHH---hhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--AACN---KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
.++...|-+|..|..| +|+++.++... ..+. ......+.+.|.+...+..++++. ..+.++....+++
T Consensus 194 --vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~---a~~~~~~~~~~~~ 266 (386)
T COG1104 194 --VDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEI---AVEELEEENARLR 266 (386)
T ss_pred --cceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 3478888999998666 67777655321 1121 122234567888888888888886 4566778888899
Q ss_pred HHHHHHHHHhccc-CCceecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCC----
Q 018665 247 ERRDFLVKSFGEL-EGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---- 318 (352)
Q Consensus 247 ~~~~~l~~~l~~~-~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~---- 318 (352)
..++++.+.|.+. |++.+... .-...+.+-+|.. .++.+...|-. .||.+..|+.|...
T Consensus 267 ~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv------------~gE~ll~~L~~-~gI~vStGSACsS~~~~p 333 (386)
T COG1104 267 KLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV------------EGESLLLALDL-AGIAVSTGSACSSGSLEP 333 (386)
T ss_pred HHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC------------cHHHHHHhccc-cCeEEeccccccCCCCCc
Confidence 9999999999975 77777633 2344455666664 78888777664 59999999988642
Q ss_pred ---------------CeEEEEeec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 319 ---------------TCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 319 ---------------~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
+.+|+|++. +++|++++++.++++++.+++.
T Consensus 334 ShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 334 SHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred cHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 589999998 8999999999999999988763
No 128
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=1.6e-28 Score=224.65 Aligned_cols=301 Identities=19% Similarity=0.200 Sum_probs=218.5
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|....|..+++ +.+++++. ..+ .++.+++++| ++++..++.+++++||.|++++|.|..+...++..|.
T Consensus 70 ~~~~~g~~~l~------~~l~~~l~~~~g---~~~~i~~~sG-~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~ 139 (385)
T TIGR01825 70 VRTIAGTLRLH------EELEEKLAKFKK---TEAALVFQSG-FNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKA 139 (385)
T ss_pred cCcccCCcHHH------HHHHHHHHHHhC---CCcEEEECcH-HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCC
Confidence 55667788888 88888887 444 2456777666 6677788888999999999999999999888888888
Q ss_pred eEEEecccCCCCcccCHHHHHhhccC----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
++..++ .+|++++++.+++ +++++++++++||+|.+.| +++|.++|+++ |+++|+||+|+.+.+.
T Consensus 140 ~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~---~~~i~~l~~~~-~~~li~De~~~~~~~~ 208 (385)
T TIGR01825 140 TKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP---LPEIVELAERY-GAVTYVDDAHGSGVMG 208 (385)
T ss_pred ceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC---HHHHHHHHHHh-CCEEEEECcccccCcC
Confidence 877664 2577788776643 6778888888999999999 89999999999 9999999999865443
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCChH
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
..............++++++.|+||.+|++| ||+++++++++.+......+ +...++..+.++.++++.. .+
T Consensus 209 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~ 282 (385)
T TIGR01825 209 EAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDEL---QR 282 (385)
T ss_pred CCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHH---hc
Confidence 2111111112222467899999999997555 99999999988887654322 2234566777777777641 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
..+..+++.++++.+.+.|+++ |+++..+.+.+ +.+.++... +..++++.|+++ ||.+.++....
T Consensus 283 -~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~L~~~-gi~v~~~~~~~ 347 (385)
T TIGR01825 283 -SPELMERLWDNTRFFKAGLGKL-GYDTGGSETPI-TPVVIGDEK-----------AAQEFSRRLFDE-GIFAQSIVFPT 347 (385)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEECCHH-----------HHHHHHHHHHHC-CcEEcccCCCC
Confidence 1245666777889999999887 88877665554 444443210 467899999987 99885432221
Q ss_pred ---CCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 317 ---DDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 317 ---~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
...++|++++. +++++++++++|++++++.
T Consensus 348 ~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 348 VPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 23689998864 9999999999999998654
No 129
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.97 E-value=1.3e-28 Score=223.42 Aligned_cols=291 Identities=13% Similarity=0.128 Sum_probs=218.9
Q ss_pred HHHHHHHHhcCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCCh--HHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTP--DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~--~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .++ ++|++|+|+|++++.++.++..+++.+++..+.+++. ...++..|.+++.++++. +..
T Consensus 42 ~~la~l~~-----~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~--~~~ 114 (363)
T TIGR02326 42 QQLLALAT-----AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE--VEP 114 (363)
T ss_pred HHHHHHhC-----CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC--CCC
Confidence 78888876 444 3799999999999999999988888887776666555 366788999999999863 445
Q ss_pred cCHHHHHhhccC--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 97 LDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 97 ~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
+|++.+++.++. +++++.+++++||||..+| +++|.++|+++ |+++|+|++++. |..+..+.. .+.
T Consensus 115 ~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~-g~~livD~~~~~----g~~~~~~~~----~~~ 182 (363)
T TIGR02326 115 PDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRH-GKVTIVDAMSSF----GGIPIDIAE----LHI 182 (363)
T ss_pred CCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHc-CCEEEEEccccc----cCcccchhh----cCc
Confidence 899999999874 4567888999999999999 89999999999 999999998764 222333332 234
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhhh------------------hccccCCChHHHHHHHHHhcccCCChH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------------------SQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
+++++|++|+++ ++.++|+++++++.++.+.... ....++++.+.+.++.++++.-.. ..
T Consensus 183 D~~~~s~~K~l~-~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~-~g 260 (363)
T TIGR02326 183 DYLISSANKCIQ-GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEK-EG 260 (363)
T ss_pred cEEEecCccccc-cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHH-hh
Confidence 488999999985 4445899999998877653210 012245777888887777754110 22
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
.++++.++++++++++.+.|+++ |+....+ +.+...++.+++... .+..++.+.|.++ ||.+.+|.
T Consensus 261 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~L~~~-gi~v~~g~ 329 (363)
T TIGR02326 261 GVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD---------YRFADFYQRLKEQ-GFVIYPGK 329 (363)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC---------CCHHHHHHHHHHC-CEEEECCc
Confidence 36778889999999999999887 7776533 345556777765210 1567888888866 99999987
Q ss_pred CCCCCCeEEEEee-c-CHHHHHHHHHHHHHHHh
Q 018665 314 AFGDDTCIRISYA-A-SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 314 ~~~~~~~iRi~~~-~-~~~~l~~~~~~l~~~~~ 344 (352)
.+ ..+++||++. . +.++++++++.|++++.
T Consensus 330 ~~-~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 330 VS-QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CC-CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 65 3579999964 4 89999999999998763
No 130
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=6.8e-29 Score=228.46 Aligned_cols=293 Identities=16% Similarity=0.195 Sum_probs=211.2
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhcCCeEEE
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
...+++ +.+|++++ .++.|++++ |++++..++..+.+ +++.|+++...|.++...++..|.++..
T Consensus 92 ~~~~Le------~~la~~~g------~~~~i~~~s-G~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~ 158 (410)
T PRK13392 92 PHVLLE------RELADLHG------KESALLFTS-GYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQV 158 (410)
T ss_pred HHHHHH------HHHHHHhC------CCCEEEECc-HHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEE
Confidence 455677 99999986 345555555 46778778877653 7788888777888888888889998877
Q ss_pred ecccCCCCcccCHHHHHhhc----cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 87 LPTRISENFLLDPKVLESKL----TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l----~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
++.+ |.+.+++.+ .+++++|++++|+||+|.+.| +++|.++|+++ |+++|+||+|+...+....
T Consensus 159 ~~~~-------d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~---l~~i~~l~~~~-~~~livDea~~~g~~g~~g- 226 (410)
T PRK13392 159 FRHN-------DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP---IEAICDLADRY-NALTYVDEVHAVGLYGARG- 226 (410)
T ss_pred EeCC-------CHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc---HHHHHHHHHHc-CCEEEEECCccccCcCCCC-
Confidence 7532 333444433 357889999999999999999 99999999999 9999999999843332221
Q ss_pred cccccCCCCCC-ceEEEeccccccccccceeEEEEcChhHHHHHHhhhhc--cccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 163 TSFASLPGMWE-RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 163 ~~~~~~~~~~~-~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..+.......+ ..++++|+||.+|++| ||+++++++++.+++.... ++.+.+++.+.++.++++. .+...
T Consensus 227 ~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~----~~~~~ 299 (410)
T PRK13392 227 GGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRH----LKTSQ 299 (410)
T ss_pred CchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHH----HhcCH
Confidence 11111111112 2388899999998777 8999999999988776543 2445566778888888875 22233
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--- 316 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~--- 316 (352)
..+++++++++++.+.|++. |+.+..+.+++ +.+.++... ...+++++|+++.||.+.+.....
T Consensus 300 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~i~~~~~~-----------~~~~~~~~L~~~~GI~v~~~~~p~~~~ 366 (410)
T PRK13392 300 TERDAHQDRVAALKAKLNAN-GIPVMPSPSHI-VPVMVGDPT-----------LCKAISDRLMSEHGIYIQPINYPTVPR 366 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEeCCHH-----------HHHHHHHHHHHhCCEEEeeeCCCCCCC
Confidence 45677888899999999987 88877665555 334443210 456888888765699998864332
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
...++|++++. +++|++++++.|+++.+++
T Consensus 367 ~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 367 GTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 23689999975 8999999999999998765
No 131
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=1.6e-28 Score=224.75 Aligned_cols=298 Identities=16% Similarity=0.135 Sum_probs=230.3
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCCh--HHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~--~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+.+++.+. ..|.+ ..+.++++++++++++.++..++++||+|+++++.|++. ...++..|.+++.++.+.+. .+
T Consensus 45 ~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~--~~ 121 (401)
T PLN02409 45 KELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQ--GA 121 (401)
T ss_pred HHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCC--CC
Confidence 55555555 44432 235789999999999999999999999999999988766 46778899999999987433 37
Q ss_pred CHHHHHhhccC----CeeEEEEcCCCCCcccCCCHHHHHHHHHH--HHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 98 DPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARI--VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 98 d~~~l~~~l~~----~~~~i~i~~p~nptG~~~~~~~l~~l~~~--~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
|++++++.+++ +++++++++++||||.++| +++|.++ |+++ |+++|+|++++. +..+..+. .
T Consensus 122 ~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~-g~~~vvD~v~s~----g~~~id~~----~ 189 (401)
T PLN02409 122 DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND---LAGVRKLLDCAQH-PALLLVDGVSSI----GALDFRMD----E 189 (401)
T ss_pred CHHHHHHHHhhCcCCCccEEEEEeecccccccCC---HHHHHHHHhhhcc-CcEEEEEccccc----CCcccccc----c
Confidence 99999999975 7899999999999999999 5566666 9999 999999999874 22222221 1
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh------------------ccccCCChHHHHHHHHHhcccCC
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS------------------QFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
++.++++.|.+|+++ ++.++|+++.++++++++..... .+.++++...+.++.++++.-
T Consensus 190 ~~~D~~~~s~~K~l~-~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~-- 266 (401)
T PLN02409 190 WGVDVALTGSQKALS-LPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLI-- 266 (401)
T ss_pred cCccEEEEcCccccC-cCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHH--
Confidence 344588888899996 33479999999998887653210 113357777788888887752
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
.....+++.++.+++.+++.+.|+++ |++++.+. .+..+++.+|+.. ++.++.+.|.+++||.+
T Consensus 267 ~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~~-----------~~~~l~~~l~~~~~i~i 334 (401)
T PLN02409 267 FEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEGI-----------DSAEIVKNAWKKYNLSL 334 (401)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCCC-----------CHHHHHHHHHHhCCEEE
Confidence 24567888899999999999999887 88776532 3345667777543 77889989988889999
Q ss_pred ccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 310 VPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 310 ~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
..|.+....+.+||+... +.+++.+++..|++++.+++.
T Consensus 335 ~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~ 375 (401)
T PLN02409 335 GLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGY 375 (401)
T ss_pred EcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 988765457899999987 889999999999999988763
No 132
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=1.7e-28 Score=225.60 Aligned_cols=297 Identities=19% Similarity=0.173 Sum_probs=214.3
Q ss_pred CCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 7 SQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
..|..+++ +.+++++. ..+ .+++|++++| ++++..++.+++++||.|++++|+|+++...++..+.+++
T Consensus 82 ~~G~~~l~------~~l~~~la~~~g---~~~~i~~tsG-~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~ 151 (397)
T PRK06939 82 ICGTQDLH------KELEEKLAKFLG---TEDAILYSSC-FDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRY 151 (397)
T ss_pred ccCCcHHH------HHHHHHHHHHhC---CCcEEEEcCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceE
Confidence 35667777 66666666 444 2367777777 7788888999999999999999999999999999999887
Q ss_pred EecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC-
Q 018665 86 ILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA- 158 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~- 158 (352)
.++. .|++.+++.+++ ++++|+..+.+|++|...+ +++|.++|+++ |+++|+||+|+.....
T Consensus 152 ~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~---~~~l~~la~~~-~~~li~De~~~~g~~~~ 220 (397)
T PRK06939 152 RYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP---LPEICDLADKY-DALVMVDDSHAVGFVGE 220 (397)
T ss_pred EeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC---HHHHHHHHHHh-CCEEEEECcccccCcCC
Confidence 7764 377888777753 5677777777899999877 99999999999 9999999999632121
Q ss_pred -CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCCh
Q 018665 159 -PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 159 -~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
+........+ ..+.+++++|+||+++ |.|+||+++++++++.+......+ ..++++..+.++.++++. .
T Consensus 221 ~~~~~~~~~~~--~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~----~ 292 (397)
T PRK06939 221 NGRGTVEHFGV--MDRVDIITGTLGKALG--GASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLEL----L 292 (397)
T ss_pred CCCCHHHHcCC--CCCCcEEEEECHHHhC--ccCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHH----H
Confidence 1111111122 1245699999999994 348999999999999887643322 223344445555555553 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
....+++++++++++.+.+.|+++ ++....+.++++ ++.++... ++.++++.|.++ ||.+.++...
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~-~~~~~~~~-----------~~~~~~~~L~~~-gI~v~~~~~~ 358 (397)
T PRK06939 293 EESDELRDRLWENARYFREGMTAA-GFTLGPGEHPII-PVMLGDAK-----------LAQEFADRLLEE-GVYVIGFSFP 358 (397)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEE-EEEECCHH-----------HHHHHHHHHHHC-CceEeeeCCC
Confidence 223567788999999999999887 776655555553 33444321 567899999987 9998864321
Q ss_pred C---CCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 316 G---DDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 316 ~---~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
. ..+++|++++. +++++++++++|++++++.
T Consensus 359 ~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 359 VVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 1 13689999865 8899999999999998764
No 133
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=1.7e-28 Score=225.36 Aligned_cols=285 Identities=18% Similarity=0.178 Sum_probs=210.2
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISE 93 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~~ 93 (352)
+.++++++ .++++|++++|+++++..++.++ .++||+|+++.+.|.+.. ..++..|.+++.++++++
T Consensus 67 ~~ia~~~~-----~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~- 140 (397)
T TIGR01976 67 EAVADLLN-----ADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA- 140 (397)
T ss_pred HHHHHHcC-----CCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-
Confidence 88888886 55568999999999998777765 678999999999987754 456778999999998742
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
++.+|++++++.++++++++++++|+||||...| +++|.++|+++ |+++++|++++. +.....+.. .+
T Consensus 141 ~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~----~~~~~~~~~----~~ 208 (397)
T TIGR01976 141 TGELHPDDLASLLSPRTRLVAVTAASNTLGSIVD---LAAITELVHAA-GALVVVDAVHYA----PHGLIDVQA----TG 208 (397)
T ss_pred CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCC---HHHHHHHHHHc-CCEEEEehhhhc----cccCCCHHH----cC
Confidence 3568999999999889999999999999999999 99999999999 999999999853 222222221 34
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhhhhc----------cccCCChHHHHHHHHHhcccC-CC--------
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ----------FTSGASSISQKAGVAALGLGY-AG-------- 234 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~-~~-------- 234 (352)
..+++.|++|++| .++|++++++++++.+...... ..++++.....++.++++.-. ..
T Consensus 209 ~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~ 285 (397)
T TIGR01976 209 ADFLTCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRR 285 (397)
T ss_pred CCEEEEechhhcC---CceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchh
Confidence 4577899999986 3589999999988776543221 112344444444444443210 00
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhcccCCceecCC----CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 235 ---GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 235 ---~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
....++..++..+..+++.+.|+++++++++.+ ..+.++.+.+++. ++.++.++|.++ ||
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~-gI 352 (397)
T TIGR01976 286 ERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGL------------PPQRVVRRLADQ-GI 352 (397)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCc------------CHHHHHHHHHHC-Ce
Confidence 012566677788888999999998867888754 1233455555532 677899998866 99
Q ss_pred EeccCCCCC-----------CCCeEEEEeec--CHHHHHHHHHHH
Q 018665 308 ALVPGDAFG-----------DDTCIRISYAA--SLTTLQAAVERI 339 (352)
Q Consensus 308 ~i~~g~~~~-----------~~~~iRi~~~~--~~~~l~~~~~~l 339 (352)
.+..+..|. ..+++|+|++. +++|++++++.|
T Consensus 353 ~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 353 DAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 999876553 24689999987 889999998864
No 134
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=8.5e-29 Score=225.82 Aligned_cols=290 Identities=17% Similarity=0.141 Sum_probs=217.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISEN 94 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~ 94 (352)
+.++++++ .++++|++++|+|++++.++.++. .++++|++....|+++.. .++..|.+++.++++. +
T Consensus 49 ~~la~~~g-----~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~ 121 (379)
T TIGR03402 49 EQVAKLLG-----AEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--E 121 (379)
T ss_pred HHHHHHhC-----CCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--C
Confidence 77888876 667899999999999999988763 456789998888877654 3445799999999863 3
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
+.+|++++++.++++++++++++++||||..+| +++|.++|+++ |+++++|++++. |..+..+.. .+-
T Consensus 122 g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~I~~l~~~~-g~~vivD~~~~~----g~~~~~~~~----~~~ 189 (379)
T TIGR03402 122 GRLDLEELRAAITDDTALVSVMWANNETGTIFP---IEEIGEIAKER-GALFHTDAVQAV----GKIPIDLKE----MNI 189 (379)
T ss_pred CcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HHHHHHHHHHc-CCEEEEECcccc----cccccCccc----CCC
Confidence 458999999999989999999999999999999 88999999999 999999999974 332333332 234
Q ss_pred eEEEeccccccccccceeEEEEcChhHHH--HHHh---hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVA--ACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 249 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (352)
++++.|.+|.+|.+ ++|+++.+++..- .+.. .......+++.....++.++++. ..+++++..++.++++
T Consensus 190 D~~~~s~~K~~gp~--G~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~~~~~~~~~~~~~~l~ 264 (379)
T TIGR03402 190 DMLSLSGHKLHGPK--GVGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAEL---ATEHLEEENTRVRALR 264 (379)
T ss_pred CEEEEcHHHcCCCC--ceEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHH
Confidence 58888999966533 4788877654310 0100 00122456777788888888875 3456778788899999
Q ss_pred HHHHHHhcc-cCCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC-------
Q 018665 250 DFLVKSFGE-LEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------- 317 (352)
Q Consensus 250 ~~l~~~l~~-~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~------- 317 (352)
+++.+.|++ ++++.+..+. ++. +.+.++.. ++.++.+.|.+ .||.+.+|..|..
T Consensus 265 ~~l~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------~~~~~~~~l~~-~gI~v~~g~~c~~~~~~~~~ 330 (379)
T TIGR03402 265 DRLEAGLLARIPDARLNGDPTKRLPNT-VNISFEYI------------EGEAILLLLDM-EGICASSGSACTSGSLEPSH 330 (379)
T ss_pred HHHHHHHHhhCCCEEEeCCCccCCCCE-EEEEecCC------------CHHHHHHhhcc-CCEEEEchhhcCCCCCCcCH
Confidence 999999985 7888776532 222 22233332 67788888765 5999999877643
Q ss_pred ------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 318 ------------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 ------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++.+|+|++. +++|++++++.|+++++.++.
T Consensus 331 ~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 331 VLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred HHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2689999998 899999999999999887653
No 135
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=1e-28 Score=224.41 Aligned_cols=314 Identities=16% Similarity=0.152 Sum_probs=231.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
+.|+++.|..+++ ++++++++ .+++++++|+++|+..++.+++++||.| +++|.|..+...+...|
T Consensus 47 ~~Y~~~~g~~~Le------eaia~~~g-------~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~G 112 (431)
T cd00617 47 EAYAGSKSFYDLE------DAVQDLFG-------FKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANG 112 (431)
T ss_pred CccCCCCCHHHHH------HHHHHHHC-------CCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCC
Confidence 3699999999999 99999985 5689999999999999999999999977 68999999999999999
Q ss_pred CeEEEecccCCCC--------cccCHHHHHhhccCC----eeEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 82 ATPVILPTRISEN--------FLLDPKVLESKLTEK----SRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 82 ~~v~~i~~~~~~~--------~~~d~~~l~~~l~~~----~~~i~i~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..++.++++++.+ +.+|+++|++.++++ +++|+++.|+||+ |++.+.+++++|.++|+++ |+++|.
T Consensus 113 a~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~-gi~li~ 191 (431)
T cd00617 113 AVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKY-GIPVVL 191 (431)
T ss_pred CEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEE
Confidence 9999999975432 349999999999754 7889999999997 9999999999999999999 999999
Q ss_pred ccccccc--cc-----CCCCccccccCCCCCCceEEEeccccccccccce------eEEEEcCh-hHHHHHHhhh----h
Q 018665 149 DEIYEHI--IY-----APATHTSFASLPGMWERTLTVNGFSKAFAMTGWR------LGYIAGPK-HFVAACNKIQ----S 210 (352)
Q Consensus 149 D~~~~~~--~~-----~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~------~g~l~~~~-~~~~~~~~~~----~ 210 (352)
|+++... .+ ++....++... .+.+.|++|.+.+.|++ .|++++++ +++++++... .
T Consensus 192 DaAr~~~na~~i~~r~~g~~~~si~ei------~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~ 265 (431)
T cd00617 192 DAARFAENAYFIKEREEGYRDKSIAEI------AREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEG 265 (431)
T ss_pred EchhhHhhhhhhhcccccccCCCHHHH------HHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCC
Confidence 9996521 11 12223333221 12234444444444443 56888876 5888877432 1
Q ss_pred c-cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCC-cccCC
Q 018665 211 Q-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGF 288 (352)
Q Consensus 211 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~ 288 (352)
. ...+.+.....+++.+++... + .+.+...++ +++++.+.|++. |+.+..|.+|+++|++.+...+. ...++
T Consensus 266 ~~~~gG~~~r~~~A~A~gL~e~~---~-~~~l~~~~~-~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~ 339 (431)
T cd00617 266 FVTYGGMAGRDMEALAQGLREAV---E-EDYLRHRVE-QVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHIPQEQF 339 (431)
T ss_pred ccccccccHHHHHHHHHHHHhcc---c-HHHHHHHHH-HHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhcCCCCcccC
Confidence 1 123445555555544665311 1 223333344 458899999998 99999999999999998753211 11112
Q ss_pred CCCCChHHHHHHHHHccCEEecc-CCCC-C-----------CCCeEEEEeec---CHHHHHHHHHHHHHHHhhh
Q 018665 289 GKIENSESLCRYLLDKAQVALVP-GDAF-G-----------DDTCIRISYAA---SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 289 ~~~~~~~~~~~~l~~~~gi~i~~-g~~~-~-----------~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~ 346 (352)
++.+++.+|+++.||.+.. |+.. + ....+||.++. +.++++...+.|..++++-
T Consensus 340 ----~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 340 ----PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred ----cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhH
Confidence 5889999999998998543 3311 1 12579999987 8899999999999888753
No 136
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=1.9e-28 Score=224.96 Aligned_cols=294 Identities=15% Similarity=0.180 Sum_probs=210.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-------CEEEecCCCCCChHHHHHhcC-CeEE---Eecc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-------DEVIIPAPFWVSYPEMARIAD-ATPV---ILPT 89 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~-------~~vl~~~~~~~~~~~~~~~~g-~~v~---~i~~ 89 (352)
+.+++++.+. ...+++++++|+++|+..+++.+...+ ++|++..+.|+++.......+ .... ..++
T Consensus 84 ~~la~~l~~~---~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 160 (396)
T PRK02627 84 EELAEKLVEL---SGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPL 160 (396)
T ss_pred HHHHHHHHhh---cCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCC
Confidence 6666766622 134899999999999999999764322 679999999988765444332 2111 1111
Q ss_pred cCCCCc----ccCHHHHHhhccCCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 90 RISENF----LLDPKVLESKLTEKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 90 ~~~~~~----~~d~~~l~~~l~~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
. .++ ..|++.+++.+++++++|++++++||+| .+++.+.+++|.++|+++ |+++|+||+|+++.+++.. .+
T Consensus 161 ~--~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DE~~~g~g~~g~~-~~ 236 (396)
T PRK02627 161 V--EGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDEN-GILLILDEVQTGMGRTGKL-FA 236 (396)
T ss_pred C--CCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhcCCCccCce-ee
Confidence 1 111 1289999999988899999999999999 688999999999999999 9999999999988766532 22
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
+..... .++ +.++||.++ +|+|+||+++++++++.+.......+++.+++.+.++.++++.... .+..++..+.
T Consensus 237 ~~~~~~-~pd---i~t~sK~~~-~G~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~ 310 (396)
T PRK02627 237 YQHYGI-EPD---IMTLAKGLG-GGVPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLENAAEV 310 (396)
T ss_pred ehhcCC-CCC---EEEEcchhh-CCcccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHH
Confidence 212211 122 457999999 9999999999999988876554556678999999999999875221 2333444444
Q ss_pred HHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEE
Q 018665 245 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 324 (352)
Q Consensus 245 ~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~ 324 (352)
.+..++.+.+.+.+++.+.... ..|.++|++++. +..++++.|.++ ||.+.|++ .+++|++
T Consensus 311 ~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~i~~~~-------------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~ 371 (396)
T PRK02627 311 GEYLRAKLRELLEKYPGIKEVR-GLGLMIGIELDR-------------PAAEIVKKALEK-GLLINVTG----DNVLRLL 371 (396)
T ss_pred HHHHHHHHHHHHHhCCCeeeec-cCcEEEEEEecC-------------cHHHHHHHHHHC-CeEEeecC----CCEEEEE
Confidence 4444444444444443333332 357778888732 678899999987 99998863 4789998
Q ss_pred eec--CHHHHHHHHHHHHHHHhhh
Q 018665 325 YAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 325 ~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
++. +++++++++++|+++++++
T Consensus 372 ~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 372 PPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred CCcccCHHHHHHHHHHHHHHHHhh
Confidence 863 9999999999999998764
No 137
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=3.3e-28 Score=223.68 Aligned_cols=287 Identities=18% Similarity=0.185 Sum_probs=211.2
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 100 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~ 100 (352)
+.+|++++ .+.+++++|+++|+..++.++.++++.|++..+.|.++...++..|.+++.++. .|++
T Consensus 106 ~~la~~~g-------~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~ 171 (407)
T PRK07179 106 KKLAAFTG-------FESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVD 171 (407)
T ss_pred HHHHHHhC-------CCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHH
Confidence 99999985 356788999999999999999999999999999999888888888888766642 4899
Q ss_pred HHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEe
Q 018665 101 VLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179 (352)
Q Consensus 101 ~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 179 (352)
.|++.+++ ++++|++++++||+|.+.| +++|.++|+++ |+++|+||+|+...+.......+...+.....++++.
T Consensus 172 ~l~~~l~~~~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~-~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~ 247 (407)
T PRK07179 172 HLRRQIERHGPGIIVVDSVYSTTGTIAP---LADIVDIAEEF-GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITA 247 (407)
T ss_pred HHHHHHHhcCCeEEEECCCCCCCCcccc---HHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEe
Confidence 99999875 5788889999999999999 88999999999 9999999999853322111111222221112358899
Q ss_pred ccccccccccceeEEEEcChhHHHHHHhhhhc--cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 018665 180 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 257 (352)
Q Consensus 180 s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 257 (352)
|++|.+| + |+|++++++++++.+...... ++.+.++...+++.++++. .....+.+++++++++++.+.|+
T Consensus 248 S~sK~~g-~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~----~~~~~~~~~~l~~~~~~l~~~L~ 320 (407)
T PRK07179 248 SLAKAFA-G--RAGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEV----IESADDRRARLHANARFLREGLS 320 (407)
T ss_pred echHhhh-c--cCeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999996 2 689999999888877654322 3333444444445555554 22234567889999999999999
Q ss_pred ccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec----cCCCCCCCCeEEEEeec--CHHH
Q 018665 258 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV----PGDAFGDDTCIRISYAA--SLTT 331 (352)
Q Consensus 258 ~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~----~g~~~~~~~~iRi~~~~--~~~~ 331 (352)
++ |+++. . .+.++++.++... +...+.+.|.++ ||.+. |+. ....+++||+++. +++|
T Consensus 321 ~~-g~~v~-~-~~~i~~l~~~~~~-----------~~~~~~~~L~~~-GI~~~~~~~p~~-~~~~~~lRis~~~~~t~ed 384 (407)
T PRK07179 321 EL-GYNIR-S-ESQIIALETGSER-----------NTEVLRDALEER-NVFGAVFCAPAT-PKNRNLIRLSLNADLTASD 384 (407)
T ss_pred Hc-CCCCC-C-CCCEEEEEeCCHH-----------HHHHHHHHHHHC-CceEeeecCCCC-CCCCceEEEEECCCCCHHH
Confidence 87 77765 2 3455667664321 456777777765 88732 211 1124789999997 9999
Q ss_pred HHHHHHHHHHHHhhhCC
Q 018665 332 LQAAVERIKKGLLTLRP 348 (352)
Q Consensus 332 l~~~~~~l~~~~~~~~~ 348 (352)
++++++.|++++++..-
T Consensus 385 i~~~~~~l~~~~~~~~~ 401 (407)
T PRK07179 385 LDRVLEVCREARDEVDL 401 (407)
T ss_pred HHHHHHHHHHHHHhhCC
Confidence 99999999999987654
No 138
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.97 E-value=2.4e-28 Score=223.35 Aligned_cols=279 Identities=14% Similarity=0.180 Sum_probs=200.8
Q ss_pred CCcEEEeCChHHHHHHHHHHh----cCCCC----EEEecCCCCCChHHHHHhcCCeEEEecc--cCCCCcc----cCHHH
Q 018665 36 PDQILVSNGAKQSILQAVLAV----CSPGD----EVIIPAPFWVSYPEMARIADATPVILPT--RISENFL----LDPKV 101 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l----~~~~~----~vl~~~~~~~~~~~~~~~~g~~v~~i~~--~~~~~~~----~d~~~ 101 (352)
.+++++++|+++|++.+++++ .++|+ +|++.++.|+++.......+......+. +...++. .|++.
T Consensus 88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 167 (389)
T PRK01278 88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEA 167 (389)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHH
Confidence 478999999999999998876 33444 8999999999887665544332222110 0011111 48999
Q ss_pred HHhhccCCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEec
Q 018665 102 LESKLTEKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 180 (352)
Q Consensus 102 l~~~l~~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 180 (352)
+++.+++++++|+++.++|++| .++|.+++++|.++|+++ |+++|+||+|.++.+.+... ........ .-+.+
T Consensus 168 l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~~-~~~~~~~~----pdi~t 241 (389)
T PRK01278 168 LKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDEN-GLLLIFDEVQCGMGRTGKLF-AHEWAGVT----PDIMA 241 (389)
T ss_pred HHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCcce-eecccCCC----CCEEE
Confidence 9999988899999998888998 788999999999999999 99999999999887665421 11111111 12568
Q ss_pred cccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhc---
Q 018665 181 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG--- 257 (352)
Q Consensus 181 ~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--- 257 (352)
+||.++ +|+|+|++++++++++.+.......+++.|++.+.++.++++... .+ +..++++++.+.+.+.|+
T Consensus 242 ~sK~l~-~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~--~~---~~~~~~~~~~~~l~~~l~~l~ 315 (389)
T PRK01278 242 VAKGIG-GGFPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVIL--AP---GFLDNVQRMGLYLKQKLEGLV 315 (389)
T ss_pred Eehhcc-CCcceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHh--hh---HHHHHHHHHHHHHHHHHHHHH
Confidence 999998 899999999999998888766666777899999999988886411 11 122223333333333332
Q ss_pred -ccCC-ceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHH
Q 018665 258 -ELEG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQ 333 (352)
Q Consensus 258 -~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~ 333 (352)
+.++ +..+. ..|.+++++++. ++.+++++|+++ ||.+.|++ .+++|++++. ++++++
T Consensus 316 ~~~~~~~~~v~-g~G~~~~i~~~~-------------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~ 376 (389)
T PRK01278 316 DRFPDVIEEVR-GKGLLLGLKCVV-------------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEID 376 (389)
T ss_pred hhCCCceeeEe-cccEEEEEEEec-------------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHH
Confidence 2332 22233 356777777643 577899999987 99999873 5799999764 899999
Q ss_pred HHHHHHHHHHhh
Q 018665 334 AAVERIKKGLLT 345 (352)
Q Consensus 334 ~~~~~l~~~~~~ 345 (352)
+++++|++++++
T Consensus 377 ~~l~~l~~~l~~ 388 (389)
T PRK01278 377 EALERLERAAES 388 (389)
T ss_pred HHHHHHHHHHHh
Confidence 999999999865
No 139
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=3.3e-28 Score=220.33 Aligned_cols=290 Identities=13% Similarity=0.150 Sum_probs=215.1
Q ss_pred HHHHHHHHhcCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTP--DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ +++ ..|++++|+++++..++.++..+++++++..+.+++ +...++..|.+++.++++. ++.
T Consensus 38 ~~la~~~~-----~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~ 110 (355)
T TIGR03301 38 DRLLALAG-----GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE--YEP 110 (355)
T ss_pred HHHHHHhc-----CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC--CCC
Confidence 77777776 433 368889999999999999998888887766655544 4567788999999998863 456
Q ss_pred cCHHHHHhhccC--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 97 LDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 97 ~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
+|++++++.+++ +.+++++++++|++|...| +++|+++|+++ ++++|+|++++.. ..+.++.. ++.
T Consensus 111 ~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~-~~~livD~~~s~g----~~~~~~~~----~~~ 178 (355)
T TIGR03301 111 PDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSH-GAVLIVDAMSSFG----AIPIDIEE----LDV 178 (355)
T ss_pred CCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHc-CCEEEEEeccccC----Ccccchhh----cCc
Confidence 899999999864 4567778889999999999 89999999999 9999999987642 21222222 345
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhhh-----------------hccccCCChHHHHHHHHHhcccCCChHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-----------------SQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
+++++|++|+++ ++.++|++++++++++.+.... ....++++...+.++.++++.-.. ...
T Consensus 179 d~~~~s~~K~l~-~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~-~g~ 256 (355)
T TIGR03301 179 DALIASANKCLE-GVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEA-EGG 256 (355)
T ss_pred cEEEecCCcccc-cCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHH-ccc
Confidence 688999999874 3345799999999988765210 112345777777777777764110 123
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~ 314 (352)
+++..++++++++++.+.|+++ |+++..+ .++.++++.+|+... .+..++.++|.++ ||.+.++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~-gi~i~~~~~ 325 (355)
T TIGR03301 257 VPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDPD---------FDFDDFYQELKER-GFVIYPGKL 325 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCCc---------chHHHHHHHHHHC-CEEEECCcc
Confidence 6778888999999999999887 7776533 245567788775210 1456888998876 999999865
Q ss_pred CCCCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 315 FGDDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 315 ~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
+. .+++|+++.. +.++++++++.|++++
T Consensus 326 ~~-~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 326 TL-ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred cc-ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 43 3799999865 8899999999998753
No 140
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.97 E-value=2.2e-28 Score=223.26 Aligned_cols=295 Identities=18% Similarity=0.151 Sum_probs=219.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc-----CC-CCEEEecCCCCCChHHH---HHhcCCeEEEecccC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC-----SP-GDEVIIPAPFWVSYPEM---ARIADATPVILPTRI 91 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-----~~-~~~vl~~~~~~~~~~~~---~~~~g~~v~~i~~~~ 91 (352)
+.++++....+. .++++|++|+|++++++.++.++. ++ +++|+++...|+++... ++..|.+++.++++.
T Consensus 46 ~a~~~~~~~~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~ 124 (382)
T TIGR03403 46 EALDKLYKGINA-RDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE 124 (382)
T ss_pred HHHHHHHHHcCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC
Confidence 777777653232 257899999999999999888752 44 46899998777766544 567899999999873
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
++.+|++++++.++++++++++++|+||||..+| +++|.++|+++ |+++++|++++. +..+..+..
T Consensus 125 --~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~-g~~~ivD~a~~~----g~~~~~~~~---- 190 (382)
T TIGR03403 125 --QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKEIGEICKER-GVLFHTDAVQAI----GKIPVDVQK---- 190 (382)
T ss_pred --CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHHHHHHHHHc-CCEEEEechhhc----CCCccCccc----
Confidence 3468999999999888999999999999999999 88999999999 999999999764 222222221
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHH--HHHH---hhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--AACN---KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
.+.++++.|++|.+|.+| +|+++.++... ..+. .......++++...+.++..+++. ..+.++...++++
T Consensus 191 ~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~ 265 (382)
T TIGR03403 191 AGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL---ANEYLDFEKSHVR 265 (382)
T ss_pred cCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHH---HHHhHHHHHHHHH
Confidence 234488999999877555 57776654321 1110 011123456888888888888865 2445777788899
Q ss_pred HHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC------
Q 018665 247 ERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------ 317 (352)
Q Consensus 247 ~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~------ 317 (352)
++++++.+.|++++++.++.+. ...++.+.++.. ++.++.+.|.++ ||.+..|+.|..
T Consensus 266 ~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~L~~~-gI~v~~g~~c~~~~~~~~ 332 (382)
T TIGR03403 266 RLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV------------EGEAMLWDLNKA-GIAASTGSACASEDLEAN 332 (382)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC------------CHHHHHHhhccC-CEEEEchhccCCCCCCcC
Confidence 9999999999988899888653 133444555543 677888887655 999998766530
Q ss_pred -------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 318 -------------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 -------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+.+|+|++. +++|++++++.|++++++++.
T Consensus 333 ~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 333 PVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred HHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2579999998 999999999999999887653
No 141
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=3.5e-28 Score=219.59 Aligned_cols=283 Identities=18% Similarity=0.210 Sum_probs=209.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 100 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~ 100 (352)
+.++++++ . ++.++++++++++..++.+++++||.|++++|.|.++...++..|.+++.++. .|++
T Consensus 53 ~~la~~~~-----~--~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~ 118 (349)
T cd06454 53 EELAEFHG-----K--EAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDME 118 (349)
T ss_pred HHHHHHhC-----C--CCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHH
Confidence 88888875 2 34566667788888888888899999999999999998889999999988752 3677
Q ss_pred HHHhhccC-----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCC-CCCCc
Q 018665 101 VLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWER 174 (352)
Q Consensus 101 ~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~-~~~~~ 174 (352)
++++.+++ +++++++++++||+|...| +++|+++|+++ |+++|+|++++...+... ...+.... ...+.
T Consensus 119 ~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~-~~~livD~a~~~g~~~~~-~~~~~~~~~~~~~~ 193 (349)
T cd06454 119 DLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKY-GAILFVDEAHSVGVYGPH-GRGVEEFGGLTDDV 193 (349)
T ss_pred HHHHHHHHhhccCCCeEEEEeccccCCCCccC---HHHHHHHHHHc-CCEEEEEccccccccCCC-CCChhhhccccccC
Confidence 77777753 4677888899999999999 89999999999 999999999874222111 11111111 12467
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+++++|++|.+|.+| |+++.++++++.+......+ +.+.++..+.++.++++.. .+ .+..+++++++++.+
T Consensus 194 ~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~~~~~~~~~~~~~~l 266 (349)
T cd06454 194 DIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVL---QG-GPERRERLQENVRYL 266 (349)
T ss_pred cEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHH
Confidence 799999999998544 89999999888876543322 2356677777777777641 22 456778889999999
Q ss_pred HHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---CCCeEEEEeec--
Q 018665 253 VKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA-- 327 (352)
Q Consensus 253 ~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~~~~iRi~~~~-- 327 (352)
.+.|+++ |+.+..+..+++.++.+++.. ++.++.+.|.++ ||.+.++.... ..+++|++++.
T Consensus 267 ~~~l~~~-g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~ 333 (349)
T cd06454 267 RRGLKEL-GFPVGGSPSHIIPPLIGDDPA-----------KAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAH 333 (349)
T ss_pred HHHHHhc-CCcccCCCCCcEEEEeCCChH-----------HHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCC
Confidence 9999887 777765555554444444211 578899999977 99998754221 14789999986
Q ss_pred CHHHHHHHHHHHHHH
Q 018665 328 SLTTLQAAVERIKKG 342 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~ 342 (352)
+++++++++++|+++
T Consensus 334 ~~~~i~~~~~~l~~~ 348 (349)
T cd06454 334 TKEDIDRLLEALKEV 348 (349)
T ss_pred CHHHHHHHHHHHHHh
Confidence 899999999999875
No 142
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=1.2e-28 Score=220.95 Aligned_cols=291 Identities=16% Similarity=0.209 Sum_probs=208.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC-hHH-HHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPE-MARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~-~~~-~~~~ 79 (352)
..|+|++...+++ +++|++++ .+.+.+++|+++++...+.+++++||+|+++.|.|.. +.. ....
T Consensus 28 ~~Y~~~~~~~~L~------~~la~~~g-------~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~ 94 (333)
T PRK10534 28 DVYGDDPTVNALQ------DYAAELSG-------KEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAGGAAV 94 (333)
T ss_pred cccCCCHHHHHHH------HHHHHHhC-------CCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCCchHH
Confidence 3588889999999 99999986 3445688888888888888888999999998887753 321 1233
Q ss_pred cC-CeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 80 AD-ATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 80 ~g-~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.+ .+++.++.+ .++.+|+++|++++++ ++++|++++|+ +|.++|.+++++|+++|+++ ++++++||+|
T Consensus 95 ~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~-~~~lvvDEA~ 169 (333)
T PRK10534 95 LGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRER-NLALHVDGAR 169 (333)
T ss_pred hcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHc-CCeEEeeHHH
Confidence 33 677777664 4577899999999865 57899999776 49999999999999999999 9999999997
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeE-EEEcChhHHHHHHhhhhccccCC--ChHHHHHHHHHhc
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVAALG 229 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g-~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 229 (352)
....... ...+...+.. +.+ .++.|+||.+|++ +| |+++++++++.+......+..+. +.+.+.++.++++
T Consensus 170 ~~~~~~~-~~~~~~~~~~-~~~-~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 243 (333)
T PRK10534 170 IFNAVVA-YGCELKEITQ-YCD-SFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALK 243 (333)
T ss_pred HHHHHHH-cCCCHHHHHh-cCC-EEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 6321100 0111111111 112 2334899988743 67 68889999999987765543222 3344555555553
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
. . .+..++.++.++++.+.|+++ |+.+..+ .++|+++++++. +..++.+.|.++ ||.+
T Consensus 244 ~------~-~~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~~~~~~------------~~~~~~~~l~~~-gi~v 301 (333)
T PRK10534 244 H------N-VARLQEDHDNAAWLAEQLREA-GADVMRQ-DTNMLFVRVGEE------------QAAALGEYMRER-NVLI 301 (333)
T ss_pred h------h-HHHHHHHHHHHHHHHHHHHhC-CCccCCC-CceEEEEECCch------------hHHHHHHHHHHc-Ceee
Confidence 2 1 223333455678899999988 8887765 588899988642 567787777765 9999
Q ss_pred ccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 310 VPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 310 ~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
.++. ++|++.+. +.+++++++++|++++.
T Consensus 302 ~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 302 NASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred cCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 8862 57887763 89999999999997764
No 143
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=4.7e-28 Score=221.68 Aligned_cols=283 Identities=17% Similarity=0.162 Sum_probs=207.2
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 100 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~ 100 (352)
+.++++++ .+ +.++++++++++..++..++++||.|+++.|.|..+...++..|.+++.++. .|++
T Consensus 91 ~~la~~~~------~~-~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~ 156 (385)
T PRK05958 91 EELAEWFG------AE-RALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVD 156 (385)
T ss_pred HHHHHHhC------CC-cEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHH
Confidence 66666653 23 4455556667777777888999999999999999999999999999888864 2778
Q ss_pred HHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC--CCCccccccCCCCCCce
Q 018665 101 VLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA--PATHTSFASLPGMWERT 175 (352)
Q Consensus 101 ~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~--~~~~~~~~~~~~~~~~~ 175 (352)
.+++.+++ .++++++.+++|++|...+ +++|+++|+++ |+++|+||+|+.+.+. +........+. ..+++
T Consensus 157 ~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~-~~~li~De~~~~g~~~~~g~~~~~~~~~~-~~~~~ 231 (385)
T PRK05958 157 ALEALLAKWRAGRALIVTESVFSMDGDLAP---LAELVALARRH-GAWLLVDEAHGTGVLGPQGRGLAAEAGLA-GEPDV 231 (385)
T ss_pred HHHHHHHhccCCCeEEEEEecccCCCCcCC---HHHHHHHHHHh-CCEEEEECcccccccCCCCCchHHhhCCC-CCCce
Confidence 88888864 3556666778999999988 99999999999 9999999999754332 22111111222 24678
Q ss_pred EEEeccccccccccceeEEEEcChhHHHHHHhhhhc--cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
+++.|+||.+|.+| ||+++++++++.+...... ++.++++..+.++.++++.. +...++.+++.++++.+.
T Consensus 232 i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~----~~~~~~~~~~~~~~~~l~ 304 (385)
T PRK05958 232 ILVGTLGKALGSSG---AAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRIL----RREPERRERLAALIARLR 304 (385)
T ss_pred EEEEechhhcccCC---cEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHH
Confidence 99999999998655 8999999888877544322 23345666666666777641 111466788888999999
Q ss_pred HHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---CCCeEEEEeec--C
Q 018665 254 KSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA--S 328 (352)
Q Consensus 254 ~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~~~~iRi~~~~--~ 328 (352)
+.|+.. ++++..+.+ .++++.+++.. ++.++.+.|.++ ||.+.++..+. .++++|++++. +
T Consensus 305 ~~L~~~-~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~lRis~~~~~~ 370 (385)
T PRK05958 305 AGLRAL-GFQLMDSQS-AIQPLIVGDNE-----------RALALAAALQEQ-GFWVGAIRPPTVPAGTSRLRITLTAAHT 370 (385)
T ss_pred HHHHHc-CCCcCCCCC-CEEEEEeCCHH-----------HHHHHHHHHHHC-CceEecccCCCCCCCCceEEEEecCCCC
Confidence 999887 677665544 45677776421 567899999865 99998754332 24689999985 8
Q ss_pred HHHHHHHHHHHHHHH
Q 018665 329 LTTLQAAVERIKKGL 343 (352)
Q Consensus 329 ~~~l~~~~~~l~~~~ 343 (352)
++++++++++|++++
T Consensus 371 ~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 371 EADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998763
No 144
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=8e-28 Score=220.87 Aligned_cols=295 Identities=17% Similarity=0.185 Sum_probs=211.1
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhcCCeEEE
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
...+++ +.+|++++ .+..+++++|++++..++..+.+ +++.|+.....|.+....++..|.++..
T Consensus 91 ~~~~Le------~~la~~~g-------~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~ 157 (402)
T TIGR01821 91 PHVELE------AELADLHG-------KESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFI 157 (402)
T ss_pred HHHHHH------HHHHHHhC-------CCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEE
Confidence 345566 88888875 34566677778999989888765 5666666666777777788888888766
Q ss_pred ecccCCCCcccCHHHHHhhcc---C-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 87 LPTRISENFLLDPKVLESKLT---E-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~---~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
++.+ |++.+++.++ + ++++|++++|+||+|.+.| +++|.++|+++ |+++|+||+|+...+.....
T Consensus 158 ~~~~-------d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~-~~~livDea~~~G~~g~~g~ 226 (402)
T TIGR01821 158 FRHN-------DVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP---IEEICDLADKY-GALTYLDEVHAVGLYGPRGG 226 (402)
T ss_pred ECCC-------CHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHc-CCEEEEeCcccccccCCCCC
Confidence 6532 5566666654 2 5789999999999999999 99999999999 99999999998433322111
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhc--cccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
............+++++|+||++|+.| ||+++++++++.+...... ++.+.++..+.++.++++.. +....
T Consensus 227 g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~----~~~~~ 299 (402)
T TIGR01821 227 GIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHL----KESQD 299 (402)
T ss_pred ccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHh----hcCHH
Confidence 111111111123588899999998767 8999999999888754432 34567777888888888752 11244
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---D 317 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~ 317 (352)
+.+...++++++.+.|+++ |+.+..+.+++ +.+.++... .+.++.+.|++++||.+.+..... .
T Consensus 300 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-~~i~~~~~~-----------~a~~~~~~L~~~~Gi~v~~~~~p~~~~g 366 (402)
T TIGR01821 300 LRRAHQENVKRLKNLLEAL-GIPVIPNPSHI-VPVIIGDAA-----------LCKKVSDLLLNKHGIYVQPINYPTVPRG 366 (402)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeCCHH-----------HHHHHHHHHHhcCCEEEEeECCCCCCCC
Confidence 5556678888999999887 77776655554 555554310 456788888766799998754332 2
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
..++|++++. +++|++++++.|+++++++.
T Consensus 367 ~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 398 (402)
T TIGR01821 367 TERLRITPTPAHTDKMIDDLVEALLLVWDRLG 398 (402)
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 3689999976 89999999999999998753
No 145
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=1.1e-27 Score=217.76 Aligned_cols=293 Identities=16% Similarity=0.165 Sum_probs=217.0
Q ss_pred HHHHHHHHhcCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTP--DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .++ +.|++++|++++++.++.++..++|.|+++.+++++.. ..++..|.+++.++.+. ++.
T Consensus 44 ~~l~~l~~-----~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~ 116 (368)
T PRK13479 44 AKLVAIAT-----GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGE--DEP 116 (368)
T ss_pred HHHHHHhC-----CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCC--CCC
Confidence 77777775 433 56889999999999999999999999999988887764 77889999999999863 345
Q ss_pred cCHHHHHhhccC--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 97 LDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 97 ~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
+|++++++.+++ +++++++++++||||...| +++|.++|+++ |+++|+|++++. +..+..+.. .+.
T Consensus 117 ~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~-~~~livDa~~~~----g~~~~~~~~----~~~ 184 (368)
T PRK13479 117 PDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRH-GKRLIVDAMSSF----GAIPIDIAE----LGI 184 (368)
T ss_pred CCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHc-CCEEEEEccccc----CCccccccc----cCc
Confidence 899999998864 4568889999999999999 88999999999 999999977643 222222222 233
Q ss_pred eEEEecccccc-ccccceeEEEEcChhHHHHHHhhhh-----------------ccccCCChHHHHHHHHHhcccCCChH
Q 018665 175 TLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQS-----------------QFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 175 ~i~~~s~sK~~-g~~g~~~g~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
.++++|++|++ |.+| +||+++++++++.+..... .+.++++...+.++.++++.-. ...
T Consensus 185 d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~-~~~ 261 (368)
T PRK13479 185 DALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELE-EEG 261 (368)
T ss_pred eEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHH-Hhh
Confidence 47888999987 4445 7999999998887654321 1123567677666666665411 123
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
.+++..++++++++.+.+.|+++ |+.+..+. ....+.+.++...+ .+..++.++|.++ ||.+.+|.
T Consensus 262 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~L~~~-gi~v~~g~ 330 (368)
T PRK13479 262 GVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPA---------YDFKEFYERLKEQ-GFVIYPGK 330 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCC---------cCHHHHHHHHHHC-CEEEecCC
Confidence 46777889999999999999988 77765331 22223333433200 1567899998876 99998875
Q ss_pred CCCCCCeEEEEe-ec-CHHHHHHHHHHHHHHHhhhC
Q 018665 314 AFGDDTCIRISY-AA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 314 ~~~~~~~iRi~~-~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+ ..+++|++. .. +++|++++++.|++++++++
T Consensus 331 ~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 331 LT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 43 356899986 44 99999999999999998653
No 146
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=1.4e-27 Score=217.80 Aligned_cols=302 Identities=14% Similarity=0.150 Sum_probs=217.7
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
..+++ +.+|++++ .+++++++|+++++..++.+++++||+|+++.++|.+....++..|.+++.++.
T Consensus 65 ~~~l~------~~lA~~~g-------~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~ 131 (387)
T PRK09331 65 IADFH------EDLAEFLG-------MDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPK 131 (387)
T ss_pred HHHHH------HHHHHHhC-------CCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeC
Confidence 45666 99999986 356888999999999999999999999999999999988889999999999998
Q ss_pred cCCCCcccCHHHHHhhccC-------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 90 RISENFLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 90 ~~~~~~~~d~~~l~~~l~~-------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+.+.++.+|++.+++.+++ ++++|++++|+|++|...| +++|+++|+++ |+++++|++|+. |..+
T Consensus 132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~-g~~livD~a~~~----g~~~ 203 (387)
T PRK09331 132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEY-GIPFLLNGAYTV----GRMP 203 (387)
T ss_pred ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHc-CCEEEEECCccc----CCcC
Confidence 4334566899999998863 6899999999999999999 99999999999 999999999975 2212
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--------ccCCChHHHHHHHHHhcccCCC
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--------TSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
..... .+.++++.|++|+++ ++.++|++++++++++.+.+....+ ..+.+.....++.++++. .
T Consensus 204 ~~~~~----~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~---~ 275 (387)
T PRK09331 204 VDGKK----LGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPH---V 275 (387)
T ss_pred CCHHH----cCCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHH---H
Confidence 22222 244589999999997 5568999999999888775532211 112222233334444432 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccCCceecC--CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSE--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
.+.. +..++..++.+++.+.|++++|++++. +....++.++.|.... ...+ ...++..+.+.|.++ ||...+.
T Consensus 276 ~~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~-~~~~--~~~~~~~~~~~L~~~-gI~~~~~ 350 (387)
T PRK09331 276 VERV-KRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDE-IAKK--HKRRGFFLYEELKKR-GIHGIKP 350 (387)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhH-Hhhh--ccccchhHHHHHHHc-CceEEcc
Confidence 2222 234455667778999999998998873 2334445566552110 0000 001456799998865 8974332
Q ss_pred CCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 313 DAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+....+|+.... ++++++++++.|++++++++-
T Consensus 351 ---~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~~ 384 (387)
T PRK09331 351 ---GATKEFKLSTYGLTWEQVEYVADAFKEIAEKYGL 384 (387)
T ss_pred ---CCceEEEEEeccCCHHHHHHHHHHHHHHHHhcCC
Confidence 134567777644 999999999999999887543
No 147
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=1.3e-27 Score=219.89 Aligned_cols=298 Identities=18% Similarity=0.195 Sum_probs=210.9
Q ss_pred CCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhcCC
Q 018665 5 RVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
++++...+++ +.+|++++ . +..++.++|++++..++..+.+ +++.|+.....|.+....++..+.
T Consensus 88 g~~~~~~~l~------~~la~~~g------~-~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~ 154 (407)
T PRK09064 88 GTNHYHVELE------RELADLHG------K-EAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRC 154 (407)
T ss_pred cCHHHHHHHH------HHHHHHhC------C-CcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCC
Confidence 3445556677 99998875 3 3445556667788877877654 566566666667667677777888
Q ss_pred eEEEecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
++..++. .|++.+++.++ +++++|++++++||+|.+.| +++|.++|+++ |+++|+||+|+...+.
T Consensus 155 ~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~---l~~i~~l~~~~-~~~livDEa~~~G~~g 223 (407)
T PRK09064 155 EKHIFRH-------NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP---IAEICDLADKY-NALTYLDEVHAVGMYG 223 (407)
T ss_pred cEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC---HHHHHHHHHHc-CCEEEEECCCcccccC
Confidence 7766653 26677777664 46789999999999999999 99999999999 9999999999832222
Q ss_pred CCCccccccCCC-CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCCh
Q 018665 159 PATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 159 ~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
... ..+..... ....+++++|+||.+|+.| ||+++++++++.+......+ +.+.++..+.++.++++. .
T Consensus 224 ~~g-~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~----~ 295 (407)
T PRK09064 224 PRG-GGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRH----L 295 (407)
T ss_pred CCC-CChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHH----H
Confidence 211 11111111 1133688999999998766 99999999988887654332 445667777777777764 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
+.....+++++++++++.+.|+++ |++++.+.+ .++.+.++... .+.++.++|+++.||.+.+....
T Consensus 296 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~iv~i~~~~~~-----------~~~~l~~~L~~~~gi~v~~~~~p 362 (407)
T PRK09064 296 KESNEERERHQERAAKLKAALDAA-GIPVMPNES-HIVPVMVGDPE-----------KCKKASDMLLEEHGIYVQPINYP 362 (407)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCC-CEEEEEeCCHH-----------HHHHHHHHHHHhCCEEEeeECCC
Confidence 222344677888999999999987 777765444 44566654321 46789888876669999875433
Q ss_pred CC---CCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 316 GD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 316 ~~---~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
.. ..++|++++. +++|++++++.|+++++++.
T Consensus 363 ~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 363 TVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred CCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 22 2679999986 88999999999999988764
No 148
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=8.2e-28 Score=219.32 Aligned_cols=287 Identities=14% Similarity=0.147 Sum_probs=215.5
Q ss_pred HHHHHHHHhcCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCeEEEecccCCCCc
Q 018665 21 QQFVINLKENGLSYT-PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~v~~i~~~~~~~~ 95 (352)
+.++++++ .. .++|++++|+++++..++.+++++||+|+++.+.|.++.. .++..|.+++.++.+. ++
T Consensus 51 ~~la~~~~-----~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~ 123 (376)
T TIGR01977 51 QLLAKLFN-----APSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EG 123 (376)
T ss_pred HHHHHHhC-----cCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CC
Confidence 88888886 43 3589999999999999999998999999999999987653 4455699999998863 45
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
.+|++++++.++++++++++++|+||||.++| +++|.++|+++ |+++|+|++++... .+..+.. .+.+
T Consensus 124 ~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~i~~l~~~~-~~~livD~a~~~g~----~~~~~~~----~~~D 191 (376)
T TIGR01977 124 LISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEEIGELAQEN-GIFFILDAAQTAGV----IPIDMTE----LAID 191 (376)
T ss_pred CcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHHHHHHHHHc-CCEEEEEhhhccCc----cCCCchh----cCCC
Confidence 68999999999889999999999999999999 88899999999 99999999997522 1122211 3455
Q ss_pred EEEeccccccccccceeEEEEcChhH-HHHHHhh----------------hhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNKI----------------QSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
+++.|.+|+++.+ .+.|+++.+++. +..+... .+....+++.....++.++++.- .....
T Consensus 192 ~~~~s~~K~l~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~--~~~g~ 268 (376)
T TIGR01977 192 MLAFTGHKGLLGP-QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFI--EKIGI 268 (376)
T ss_pred EEEecccccccCC-CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHH--HHhCH
Confidence 8999999998533 246766655443 1111100 01122346666666666666541 13345
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC
Q 018665 239 SKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~ 314 (352)
+.+.++.+++.+.+.+.|++.++++++.+. .+..+++.+++. +..++.+.|.+++||.+..|..
T Consensus 269 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------~~~~~~~~L~~~~gi~v~~g~~ 336 (376)
T TIGR01977 269 ANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI------------DSEEVADILDEKFDIATRTGLH 336 (376)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC------------CHHHHHHHHhccCCEEEEcccc
Confidence 677888889999999999988888877531 244566676643 7788999988777999988765
Q ss_pred CC----------CCCeEEEEeec--CHHHHHHHHHHHHH
Q 018665 315 FG----------DDTCIRISYAA--SLTTLQAAVERIKK 341 (352)
Q Consensus 315 ~~----------~~~~iRi~~~~--~~~~l~~~~~~l~~ 341 (352)
+. .++.+|++++. +++|++++++.|++
T Consensus 337 ~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 337 CAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred cchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 53 34789999988 99999999999976
No 149
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=7e-28 Score=216.67 Aligned_cols=295 Identities=17% Similarity=0.137 Sum_probs=211.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~ 79 (352)
.|++++...+++ +.++++++ ++++++++|+++++..++.+++++||+|+++.|+|..+.. ....
T Consensus 27 ~~~~~~~~~~l~------~~~a~~~g-------~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~ 93 (338)
T cd06502 27 VYGEDPTTAKLE------ARAAELFG-------KEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAGAPEFL 93 (338)
T ss_pred ccCCCHHHHHHH------HHHHHHhC-------CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCCcHHHH
Confidence 356666777888 88888874 5678888888999999999999999999999999876543 3455
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccC-------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.|.+++.++.+ . +.+|++++++++++ ++++|++++|+|| |..++.+++++|+++|+++ |+++|+|++|
T Consensus 94 ~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~-~~~livDea~ 168 (338)
T cd06502 94 SGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKEN-GLPLHLDGAR 168 (338)
T ss_pred cCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHc-CCeEeechHH
Confidence 89999999874 2 46899999999864 6889999999997 6666989999999999999 9999999998
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcc
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGL 230 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 230 (352)
..+...... .++..... +..+++.|+||++|++| .+++++++++++.+......+ +.+.+.+.+.++..+++.
T Consensus 169 ~~~~~~~~~-~~~~~~~~--~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~ 243 (338)
T cd06502 169 LANAAAALG-VALKTYKS--GVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALEN 243 (338)
T ss_pred HHHHHHhcC-CCHHHHHh--cCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcC
Confidence 643211111 12222211 22366889999998776 335568899988887654332 334566777777777764
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH--ccCEE
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD--KAQVA 308 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~gi~ 308 (352)
.. ..+..+++.++++++.+.|+++ ++.+..+..++ +.+..+... ....++.+++.+ +.|+.
T Consensus 244 ----~~-~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~-~~v~~~~~~----------~~~~~l~~~l~~~~~~gi~ 306 (338)
T cd06502 244 ----DL-WLRRLRHDHEMARRLAEALEEL-GGLESEVQTNI-VLLDPVEAN----------AVFVELSKEAIERRGEGVL 306 (338)
T ss_pred ----ch-HHHHHHHHHHHHHHHHHHHHhc-CCCcccccCCe-EEEecCCcc----------HHHHHHHHHHHHhhhCCEE
Confidence 22 3345567777888999999987 55555545454 555554210 022344444431 34888
Q ss_pred eccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHH
Q 018665 309 LVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 341 (352)
Q Consensus 309 i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~ 341 (352)
+.+.. .+++|++++. +++|++++++.+++
T Consensus 307 ~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 307 FYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 87642 3899999986 88999999998865
No 150
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=5.7e-28 Score=221.63 Aligned_cols=275 Identities=14% Similarity=0.075 Sum_probs=205.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHH-hcCC------------eEEEecccCCCCcccCHHH
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMAR-IADA------------TPVILPTRISENFLLDPKV 101 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~-~~g~------------~v~~i~~~~~~~~~~d~~~ 101 (352)
.+++++++|+++++..+++.+...| +.|+..+++|+++..... ..|. ++..+|. .|++.
T Consensus 103 ~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 175 (398)
T PRK03244 103 GGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDA 175 (398)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHH
Confidence 4799999999999999998765444 577777788887754333 2221 2222221 27899
Q ss_pred HHhhccCCeeEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEec
Q 018665 102 LESKLTEKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 180 (352)
Q Consensus 102 l~~~l~~~~~~i~i~~p~nptG~~~~~~-~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 180 (352)
+++.+++++++|+++.++||+|..+|.+ .+++|.++|++| |+++|+||++.++.+.|... .+..... .++ +.+
T Consensus 176 l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~~-~~~~~~~-~pD---i~t 249 (398)
T PRK03244 176 LAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRH-GALLVLDEVQTGIGRTGAWF-AHQHDGV-TPD---VVT 249 (398)
T ss_pred HHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCcccchHH-hhhhhCC-CCC---EEE
Confidence 9998877889999999999999988665 599999999999 99999999999877665421 1111111 122 458
Q ss_pred cccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccC
Q 018665 181 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 260 (352)
Q Consensus 181 ~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 260 (352)
+||.+| +|+|+|++++++++++.+.......+++.|++.+.++.++++.. + -++..++++++.+++.+.|+++
T Consensus 250 ~sK~l~-~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~----~-~~~~~~~~~~~~~~l~~~L~~~- 322 (398)
T PRK03244 250 LAKGLG-GGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTI----A-SEGLLENAERLGEQLRAGIEAL- 322 (398)
T ss_pred Echhhh-CCcccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHH----H-hccHHHHHHHHHHHHHHHHHhc-
Confidence 899999 89999999999999888766555567789999999999998741 1 1244566777778888888875
Q ss_pred Cceec--CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHH
Q 018665 261 GVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAV 336 (352)
Q Consensus 261 g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~ 336 (352)
+.... ....|.++++.++.. .+.++.+.|.++ |+.+.+. .++++|++++. +++|+++++
T Consensus 323 ~~~~~~~v~g~g~~~~i~~~~~------------~~~~~~~~l~~~-Gv~~~~~----~~~~iR~~p~~~~t~~~i~~~~ 385 (398)
T PRK03244 323 GHPLVDHVRGRGLLLGIVLTAP------------VAKAVEAAAREA-GFLVNAV----APDVIRLAPPLIITDAQVDAFV 385 (398)
T ss_pred CCCceeeEeeccEEEEEEEecc------------HHHHHHHHHHHC-CeEEeec----CCCEEEEECCCcCCHHHHHHHH
Confidence 32211 223678889988642 567888888876 9999874 25789999886 889999999
Q ss_pred HHHHHHHhhhC
Q 018665 337 ERIKKGLLTLR 347 (352)
Q Consensus 337 ~~l~~~~~~~~ 347 (352)
++|+++++++.
T Consensus 386 ~~l~~~l~~~~ 396 (398)
T PRK03244 386 AALPAILDAAA 396 (398)
T ss_pred HHHHHHHHhcc
Confidence 99999998654
No 151
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=6.3e-28 Score=194.49 Aligned_cols=287 Identities=24% Similarity=0.302 Sum_probs=229.4
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC--C
Q 018665 33 SYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--K 109 (352)
Q Consensus 33 ~~~~~~i~~~~g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--~ 109 (352)
++.+++|.+..|+.+.+..++++.+.+| ++|++..|+|..|.--+.-.+++|+.+|+.+ ++.++.|.+.+.++. .
T Consensus 83 pLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~ 160 (375)
T KOG0633|consen 83 PLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSK 160 (375)
T ss_pred CCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhcccc
Confidence 4678999999999999999999999998 8999999999999988899999999999975 677999999998863 6
Q ss_pred eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc
Q 018665 110 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 189 (352)
Q Consensus 110 ~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 189 (352)
++.+++++|+||||.....+.+.+|.+.- . |.++++||+|-+|.-.+ |-..+...++|++++.++||.+|++|
T Consensus 161 iK~~F~tSPgNPtg~~ik~~di~KiLe~p--~-nglVVvDEAYidFsg~~----S~~~lV~kYpNLivlqTlSKsfGLAG 233 (375)
T KOG0633|consen 161 IKCIFLTSPGNPTGSIIKEDDILKILEMP--D-NGLVVVDEAYIDFSGVE----SRMKLVKKYPNLIVLQTLSKSFGLAG 233 (375)
T ss_pred ceEEEEcCCCCCCcccccHHHHHHHHhCC--C-CcEEEEeeeeEeecccc----ccchHhHhCCceeehhhhhhhcCcce
Confidence 89999999999999999977777776522 2 78999999999876433 33444455889999999999999999
Q ss_pred ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCcee-cCCC
Q 018665 190 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQ 268 (352)
Q Consensus 190 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~ 268 (352)
+|+|+-..+.++++-+.+....++ .|..+..++.++++... ...++..++.+.+.+.++...|.++|++.- ..+.
T Consensus 234 iRvG~~~~~~~ia~iln~~KaPYN--iS~~~s~~AL~Als~~n--~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~ 309 (375)
T KOG0633|consen 234 IRVGYGAFPLSIAEILNRAKAPYN--ISVAGSVAALAALSDSN--GKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGS 309 (375)
T ss_pred eEeecccccHHHHHHHHhccCCcc--ccchhHHHHHHhcCccc--chHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcc
Confidence 999999999999998888776655 77777888888888643 467888888999999999999999877653 3456
Q ss_pred CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC-CCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 018665 269 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD-AFGDDTCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~-~~~~~~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
...|++++..+..+ ..+..+..+++.+.|+.++--+ --++.+++||+.+.+|| -.-+++.|+.+
T Consensus 310 daNFiLi~v~~~~n---------~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Ee-ntvL~k~~K~~ 374 (375)
T KOG0633|consen 310 DANFILIEVTGGDN---------GMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEE-NTVLMKCLKQF 374 (375)
T ss_pred cccEEEEEEcCCCc---------HHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCccc-chHHHHHHHhh
Confidence 67778888765311 0345566666667799886533 23467899999998643 35556666554
No 152
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=6.3e-27 Score=214.34 Aligned_cols=223 Identities=13% Similarity=0.197 Sum_probs=175.3
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g 81 (352)
+++....++ +.+|++.+ .+++++++|+++++..++.+++++||+|+++.|+|..+...+ +..|
T Consensus 81 ~~Pt~~~Le------~~lA~leg-------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 81 NHPNSEIVE------DRLAVYEG-------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred CCcCHHHHH------HHHHHHhC-------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 455566777 99999974 567899999999999999999999999999999999997654 5679
Q ss_pred CeEEEecccCCCCcccCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh---CCCEEEEeccccc
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK---HPRLLVLSDEIYE 153 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~---~~~~~livD~~~~ 153 (352)
++++.++. . .|++.+++.+. +++++|++++|+||||.+++.+++.+|++.|.. + ++++|+|+++.
T Consensus 148 i~~v~~~~---~---~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~-~~~vvvDety~ 220 (427)
T PRK07049 148 VGAVGFAD---G---LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGH-RPIIACDNTLL 220 (427)
T ss_pred cEEEEEeC---C---CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccC-CCEEEEECCcc
Confidence 88777752 1 35666766553 478999999999999999997777777776543 7 89999999976
Q ss_pred ccccCCCCccccccCCCCCCceEEEeccccccc-cccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccC
Q 018665 154 HIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
.... ..++ ..+.++++.|+||.+| .+|+|+||+++++++++.+......++.+.+++.+.++...++.
T Consensus 221 ~~~~----~~pl-----~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t-- 289 (427)
T PRK07049 221 GPVF----QKPL-----EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET-- 289 (427)
T ss_pred cccc----CCcc-----ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh--
Confidence 4321 1121 1345699999999997 68999999999999999998877777777899888887777653
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCcee
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 264 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 264 (352)
+..+.++..+++..+.+.|++.|++..
T Consensus 290 -----l~~R~~~~~~~a~~la~~L~~~p~V~~ 316 (427)
T PRK07049 290 -----LVLRMERANRNARAVAEFLRDHPKVEK 316 (427)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 444456668889999999998877543
No 153
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.96 E-value=2.8e-27 Score=217.04 Aligned_cols=288 Identities=17% Similarity=0.190 Sum_probs=213.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEecCCCCCChHHHH---HhcCCeEEEecccCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISE 93 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~~~~vl~~~~~~~~~~~~~---~~~g~~v~~i~~~~~~ 93 (352)
+.++++++ .++++|++++|+|++++.++.++. +++++|+++.+.|.++...+ +..|.+++.++++ .
T Consensus 54 ~~la~~~g-----~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~ 126 (402)
T TIGR02006 54 NQVAELIG-----ADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--S 126 (402)
T ss_pred HHHHHHhC-----CCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--C
Confidence 88888876 677899999999999998887653 67899999999998876554 4569999999886 3
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
++.+|++.+++.++++++++++++++||||...| +++|.++|+++ |+++++|++++. +..+..+.. .+
T Consensus 127 ~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~-g~~livD~a~a~----g~~~~~~~~----~~ 194 (402)
T TIGR02006 127 NGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQD---IAAIGEICRER-KVFFHVDAAQSV----GKIPINVNE----LK 194 (402)
T ss_pred CCcCCHHHHHHhcCCCCEEEEEECCCcCceeccc---HHHHHHHHHHc-CCEEEEEcchhc----CCcccCccc----cC
Confidence 4458999999999888999999999999999999 89999999999 999999999975 222222222 24
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhh-------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
.++++.|.+|.+|.+| +|+++.+++....+... ......+++.....++.++++. ..++++...++.+
T Consensus 195 ~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~ 269 (402)
T TIGR02006 195 VDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI---AKEEMAQDTAHVL 269 (402)
T ss_pred CCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHH
Confidence 4588999999876334 78888776543322211 1123345777777777777765 2446777788899
Q ss_pred HHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC------
Q 018665 247 ERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------ 317 (352)
Q Consensus 247 ~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~------ 317 (352)
++++++.+.|++++++.+..+. ....+.+.++.. ..+.+...| + ++.+..|..|..
T Consensus 270 ~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~------------~~~~~~~~l--~-~i~v~~G~~c~~~~~~~~ 334 (402)
T TIGR02006 270 ALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYV------------EGESLIMAL--K-DLAVSSGSACTSASLEPS 334 (402)
T ss_pred HHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCc------------CHHHHHHhc--C-CEEEechhhcCCCCCCcc
Confidence 9999999999988887765321 111112223321 455665544 2 788877766643
Q ss_pred -------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 318 -------------DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 318 -------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+++|+|++. +++|++++++.|+++++.++
T Consensus 335 ~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 335 YVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred HHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2689999998 89999999999999987763
No 154
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=3e-27 Score=215.81 Aligned_cols=277 Identities=14% Similarity=0.166 Sum_probs=200.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhc---C----CCCEEEecCCCCCChHHHHHhcCCeEEE----ecccCCCCcc--cCHHHH
Q 018665 36 PDQILVSNGAKQSILQAVLAVC---S----PGDEVIIPAPFWVSYPEMARIADATPVI----LPTRISENFL--LDPKVL 102 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~---~----~~~~vl~~~~~~~~~~~~~~~~g~~v~~----i~~~~~~~~~--~d~~~l 102 (352)
.+++++++|+++++..+++.+. . ++++|++++|+|+.+...+...+..... .++..+..+. .|++.+
T Consensus 84 ~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 163 (379)
T TIGR00707 84 ADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESL 163 (379)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHH
Confidence 3599999999999998888652 2 3689999999998887666554433211 2222111111 189999
Q ss_pred HhhccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecc
Q 018665 103 ESKLTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 181 (352)
Q Consensus 103 ~~~l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 181 (352)
++.+++++++|+++.++|++|.. ++.+++++|.++|+++ |+++|+||+|.++.+.+.. .++..... .++ +.++
T Consensus 164 ~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~-~~~~i~De~~~~~~~~g~~-~~~~~~~~-~~d---~~t~ 237 (379)
T TIGR00707 164 KKAIDDETAAVIVEPIQGEGGVNPASAEFLKALREICKDK-DALLIFDEVQTGIGRTGKF-FAYEHYGI-EPD---IITL 237 (379)
T ss_pred HHHhhhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchh-hhHHhcCC-CCC---EEEE
Confidence 99998888998887667788864 6889999999999999 9999999999987665431 22111111 122 3368
Q ss_pred ccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc--
Q 018665 182 SKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-- 259 (352)
Q Consensus 182 sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 259 (352)
||.++ +|+|+||+++++++++.+........++.+++.+.++.++++. .+ ..+..++++++++.+.+.|+++
T Consensus 238 sK~~~-~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~----~~-~~~~~~~~~~~~~~~~~~l~~~~~ 311 (379)
T TIGR00707 238 AKGLG-GGVPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEV----IE-KERLLENVKEKGDYFKERLEELGK 311 (379)
T ss_pred ccccc-CCcccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH----HH-hhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 9999999999999999887654445667899999999988874 11 1245566666777777766653
Q ss_pred -CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHH
Q 018665 260 -EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAV 336 (352)
Q Consensus 260 -~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~ 336 (352)
.++... +..|.++++.++. +..++.+.|.++ ||.+.|+. .+++|++++. +++++++++
T Consensus 312 ~~~~~~~-~~~g~~~~~~~~~-------------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~ 372 (379)
T TIGR00707 312 NYPNKEV-RGKGLMLGIELEA-------------PCKDIVKKALEK-GLLVNCAG----PKVLRFLPPLIITKEEIDEAV 372 (379)
T ss_pred hCCCCcc-ccCceEEEEEecC-------------cHHHHHHHHHHC-CcEEeeCC----CCEEEEECCCcCCHHHHHHHH
Confidence 122111 2357778888764 567888888865 99998853 5799999864 899999999
Q ss_pred HHHHHHH
Q 018665 337 ERIKKGL 343 (352)
Q Consensus 337 ~~l~~~~ 343 (352)
++|++++
T Consensus 373 ~~l~~~~ 379 (379)
T TIGR00707 373 SALEEAI 379 (379)
T ss_pred HHHHHhC
Confidence 9998763
No 155
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.96 E-value=7.4e-28 Score=217.11 Aligned_cols=293 Identities=17% Similarity=0.160 Sum_probs=215.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC------------C--CCEEEecC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS------------P--GDEVIIPA 67 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~------------~--~~~vl~~~ 67 (352)
.|...++..+++ +.+++++. ..|.+.+.+++++|+|+|+++..++.++.. + ++.|+++.
T Consensus 29 ~y~~~~~~~~le------~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 102 (345)
T cd06450 29 TWDESPAATEME------AEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSD 102 (345)
T ss_pred ccccCchhHHHH------HHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcC
Confidence 477778888888 99999988 667654556899999999999999988642 2 34788889
Q ss_pred CCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 68 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
++|.++...++..|.+++.++++++ +.+|++.|++++++ +++++++++++||+|.+.+ +++|+++|+++
T Consensus 103 ~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~ 177 (345)
T cd06450 103 QAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKY 177 (345)
T ss_pred cchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHh
Confidence 9999999999989999999998743 36899999999976 7788889999999999988 99999999999
Q ss_pred CCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHH
Q 018665 142 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQ 221 (352)
Q Consensus 142 ~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
|+++++|++|+.+.......... .....+-+.+..|++|+++ ++.++|+++.+ ...+
T Consensus 178 -~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~-------------------~~~~ 234 (345)
T cd06450 178 -DLWLHVDAAYGGFLLPFPEPRHL--DFGIERVDSISVDPHKYGL-VPLGCSAVLVR-------------------ALKL 234 (345)
T ss_pred -CCeEEEechhhHHHhhChhhHHH--hcCccccCEEEEchhHhhC-CCcchHHHHHH-------------------HHHH
Confidence 99999999998765321111111 0011123467789999876 66688887544 3333
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHH
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 301 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (352)
.++...+. ...+++..++..++++++.+.|++++++.+..+..+.++.+.++.... .+ .+..++.+.|
T Consensus 235 ~~~l~~l~-----~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~---~~----~~~~~i~~~L 302 (345)
T cd06450 235 WATLRRFG-----RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVK---LD----ELNYDLSDRL 302 (345)
T ss_pred HHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcch---hh----HHHHHHHHHH
Confidence 44444443 466788888999999999999999888877654334445555543100 00 0567899998
Q ss_pred HHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHH
Q 018665 302 LDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKG 342 (352)
Q Consensus 302 ~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~ 342 (352)
.++ |+.+.++..+..+.++|++++. +.+|++++++.|+++
T Consensus 303 ~~~-g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~~ 345 (345)
T cd06450 303 NER-GGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred Hhc-CCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 876 4444444434346799999974 779999999999763
No 156
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=1.1e-26 Score=213.45 Aligned_cols=288 Identities=19% Similarity=0.194 Sum_probs=207.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
+.+|++++ .+..++.++|++++..++..+.+ +++.|+.....|.++...++..|.++..++.. |
T Consensus 97 ~~la~~~g-------~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~-------d 162 (406)
T PRK13393 97 AELADLHG-------KEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHN-------D 162 (406)
T ss_pred HHHHHHhC-------CCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCC-------C
Confidence 88888874 35666666777899989987765 67777777788888888888888888777632 5
Q ss_pred HHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 99 PKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 99 ~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
++.+++.++ +++++|++++++|++|.+.| +++|.++|+++ |+++|+||+|+...+.................
T Consensus 163 ~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~-~~~livDea~~~g~~g~~G~g~~~~~~~~~~~ 238 (406)
T PRK13393 163 PADLERKLSDLDPHRPKLVAFESVYSMDGDIAP---IAEICDVAEKH-GAMTYLDEVHAVGLYGPRGGGIAEREGLADRL 238 (406)
T ss_pred HHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCchhhhcCCCCCC
Confidence 666666553 35678899999999999999 99999999999 99999999998433322211111111111223
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhhhhc--cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+++++|+||.+|+.| ||+++++++++.+...... ++.+.++..+.++.++++.. .+. ...+.++.++.+++
T Consensus 239 ~i~~~tlsKa~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~---~~~-~~~~~~~~~~~~~l 311 (406)
T PRK13393 239 TIIEGTLAKAFGVMG---GYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHL---KAS-SAERERHQDRVARL 311 (406)
T ss_pred eEEEEeCchhhcccC---ceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHH---hhC-HHHHHHHHHHHHHH
Confidence 578899999998766 9999999998888766543 34566777788888888751 112 22345667788899
Q ss_pred HHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---CCCeEEEEeec--
Q 018665 253 VKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA-- 327 (352)
Q Consensus 253 ~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~~~~iRi~~~~-- 327 (352)
.+.|++. |+.+..+.+.+ +.+.+++.. ++.++.++|++++||.+.++.... ..+++|++++.
T Consensus 312 ~~~L~~~-g~~~~~~~~~i-~~v~~~~~~-----------~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~ 378 (406)
T PRK13393 312 RARLDKA-GIPHLPNPSHI-VPVMVGDPV-----------LCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLH 378 (406)
T ss_pred HHHHHHc-CCCcCCCCCCe-EEEEeCCHH-----------HHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCC
Confidence 9999876 77666555544 444443210 467888888876699998764333 23689999986
Q ss_pred CHHHHHHHHHHHHHHHhhh
Q 018665 328 SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~~~~ 346 (352)
+++|++++++.|+++++++
T Consensus 379 t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 379 TDADIEHLVQALSEIWARL 397 (406)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998765
No 157
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=1.4e-26 Score=212.98 Aligned_cols=307 Identities=15% Similarity=0.087 Sum_probs=213.9
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH-----H
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-----A 77 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~-----~ 77 (352)
|++..+...++ +.+++.+. .+| .+...|+++ |+++++..++.++.++||+|+++.|+|..+... +
T Consensus 57 ~~~~~~~~~l~------~~~~~~~~~~~g--~~~~~v~~~-sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~ 127 (402)
T cd00378 57 YGGCEYVDEIE------DLAIERAKKLFG--AEYANVQPH-SGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKV 127 (402)
T ss_pred cCCchHHHHHH------HHHHHHHHHHhC--CCceeeecC-CcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccc
Confidence 33444445555 55444443 333 334455555 567999999999999999999999999876543 6
Q ss_pred HhcCCeEEEecccCC-CCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc-cc
Q 018665 78 RIADATPVILPTRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY-EH 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~-~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~-~~ 154 (352)
+..|.++..++++.+ .++.+|++++++.++ ++++++++++++|| ...+ +++|+++|+++ |+++|+|++| .+
T Consensus 128 ~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~---~~~I~~l~~~~-~~~li~D~a~~~g 201 (402)
T cd00378 128 SASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPID---FKRFREIADEV-GAYLLVDMAHVAG 201 (402)
T ss_pred cccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcC---HHHHHHHHHhc-CCEEEEEccchhh
Confidence 678888888877654 257799999999985 57899988888775 4556 89999999999 9999999996 34
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcCh-hHHHHHHhhhhccccCCC-hHHHHHHHHHhcccC
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTSGAS-SISQKAGVAALGLGY 232 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~ 232 (352)
+.+.+....++. ...++++|+||++ +|+|.|++++++ ++++.+.........+.+ ...+.++..++...
T Consensus 202 ~~~~g~~~~~~~------~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~- 272 (402)
T cd00378 202 LVAGGVFPNPLP------GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEA- 272 (402)
T ss_pred hhhcccCCCccc------CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHH-
Confidence 333332222222 1237899999987 678899999877 888888765433333322 23333333344321
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCceec-CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
.....++.+++++++++.+.+.|+++ |+.+. .+.+++++|+++++.. .+...+.+.|. +.||.+.+
T Consensus 273 -~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~----------~~~~~~~~~l~-~~gI~v~~ 339 (402)
T cd00378 273 -LEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDLRPKG----------ITGKAAEDALE-EAGITVNK 339 (402)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCccC----------CCHHHHHHHHH-HcCcEEcC
Confidence 12256777888999999999999987 88776 4567888999987421 14556666554 56999975
Q ss_pred CCCC------CCCCeEEEEeec------CHHHHHHHHHHHHHHHhhhC
Q 018665 312 GDAF------GDDTCIRISYAA------SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 312 g~~~------~~~~~iRi~~~~------~~~~l~~~~~~l~~~~~~~~ 347 (352)
.... ..+.++|+++.. +++|++.+++.|++++.+-.
T Consensus 340 ~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 340 NTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred CcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 4321 134689999866 48999999999999886543
No 158
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.96 E-value=1.1e-26 Score=198.74 Aligned_cols=316 Identities=18% Similarity=0.218 Sum_probs=204.7
Q ss_pred Ccc-CCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHH-HHHH-HHh----cC--------CCCEEEec
Q 018665 2 QFV-RVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSI-LQAV-LAV----CS--------PGDEVIIP 66 (352)
Q Consensus 2 ~~y-~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~-~~~~-~~l----~~--------~~~~vl~~ 66 (352)
.+| |...|.+++| +.+|+.++ +++++|++..+++-.+ ..++ .++ .. ..-+.|+|
T Consensus 62 RNY~G~l~Gipe~r------~l~a~llg-----v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 62 RNYPGGLDGIPEAR------ELFAELLG-----VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp TSS-S-SS--HHHH------HHHHHHHT-----S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred cCCCCccCChHHHH------HHHHHHhC-----CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 478 9999999999 99999998 8899998887666544 2222 222 11 12478999
Q ss_pred CCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc--CCeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCC
Q 018665 67 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPR 143 (352)
Q Consensus 67 ~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~ 143 (352)
.|.|..+..+++.+|++.+.||+.+++ .|+|.+++.+. +.++.|+++.- +||||.+++++.+++++++--..||
T Consensus 131 vPGYDRHFai~E~~Giemi~VpM~~dG---PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~D 207 (425)
T PF12897_consen 131 VPGYDRHFAITEHFGIEMIPVPMTEDG---PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPD 207 (425)
T ss_dssp ES--HHHHHHHHHCT-EEEEEEEETTE---E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT
T ss_pred CCCchHHHHHHHhhCcEEEecCCCCCC---CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcC
Confidence 999999999999999999999998544 69999999984 46777775443 8999999999999999988433359
Q ss_pred EEEEecccccccccCCCCc-c---cc---ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCC
Q 018665 144 LLVLSDEIYEHIIYAPATH-T---SF---ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 216 (352)
Q Consensus 144 ~~livD~~~~~~~~~~~~~-~---~~---~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~ 216 (352)
..|+-|++|....+.+... . .+ ..-.+.+++++.+.|.||.. .+|-+++++.++++-++.+.+.....+.++
T Consensus 208 FRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgp 286 (425)
T PF12897_consen 208 FRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGP 286 (425)
T ss_dssp -EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S--
T ss_pred eEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCc
Confidence 9999999999655522211 1 11 11245578999999999997 499999999999999999998888888999
Q ss_pred ChHHHHHHHHHhcccC-CChHHHHHHHHHHHHHHHHHH----HHhc-ccCCceecCCCCceEEEeecCCccCCcccCCCC
Q 018665 217 SSISQKAGVAALGLGY-AGGEVVSKMVKAFRERRDFLV----KSFG-ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK 290 (352)
Q Consensus 217 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~----~~l~-~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 290 (352)
..+.|..-.+++.+.. ....++++.++.++-+.+... +.|. .....+|..|.+|+|++++..++
T Consensus 287 dKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G---------- 356 (425)
T PF12897_consen 287 DKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG---------- 356 (425)
T ss_dssp -HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT----------
T ss_pred cHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC----------
Confidence 9999999999998721 112334444444444444444 4444 34346899999999999998875
Q ss_pred CCChHHHHHHHHHccCEEeccCCCCCC------CCeEEEEeec-CHHHHHHHHHHHHHHHhh
Q 018665 291 IENSESLCRYLLDKAQVALVPGDAFGD------DTCIRISYAA-SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 291 ~~~~~~~~~~l~~~~gi~i~~g~~~~~------~~~iRi~~~~-~~~~l~~~~~~l~~~~~~ 345 (352)
.+.++++... +.||.+.|.+..++ +..|||+++. +.||++.+++.+...++-
T Consensus 357 --~AkrvV~lak-eAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 357 --TAKRVVELAK-EAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKL 415 (425)
T ss_dssp ---HHHHHHHHH-HTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHH-HhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 7888887655 55999988544322 4689999999 789999999988877653
No 159
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=2.7e-26 Score=208.99 Aligned_cols=289 Identities=15% Similarity=0.155 Sum_probs=212.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS----PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .+.+++++++|+++++..++.++.+ ++++|++.++.|.++...++..|.+++.++.+ .++.
T Consensus 66 ~~la~~~g-----~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~ 138 (371)
T PRK13520 66 EMLGELLH-----LPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLD--DDYR 138 (371)
T ss_pred HHHHHHhC-----CCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecCC--CCCc
Confidence 77777765 5556789999999999988877643 46899999999999999999999999999886 3456
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
+|+++|+++++++++.+++++++|++|...| +++|.++|+++ |+++++|++|+++...-........... .+...
T Consensus 139 ~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~-g~~livD~a~~~~~~~~~~~~~~~~~~~-~~vd~ 213 (371)
T PRK13520 139 VDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALEN-GIFLHVDAAFGGFVIPFLDDPPNFDFSL-PGVDS 213 (371)
T ss_pred CCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHc-CCCEEEEecchhHHHHhhcCCCCccccC-CCCce
Confidence 8999999999888888888888999999999 99999999999 9999999999865321000001011111 12335
Q ss_pred EEeccccccccccceeEEEEc-ChhHHHHHHhhhhcc--------ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF--------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 247 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 247 (352)
+..|.+|+. .++.++|+++. ++++++.+....... ..+.+.....++.++++. ...+..++..++..+
T Consensus 214 ~~~s~~K~~-~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~--l~~~g~~~~~~~~~~ 290 (371)
T PRK13520 214 ITIDPHKMG-LAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKY--LGREGYRKVVERCME 290 (371)
T ss_pred EEECCcccc-CccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhh--hcHhHHHHHHHHHHH
Confidence 667888964 46778887775 556777654221111 112344556666666654 124556788889999
Q ss_pred HHHHHHHHhcccCCce-ecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEee
Q 018665 248 RRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 326 (352)
Q Consensus 248 ~~~~l~~~l~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~ 326 (352)
+++++.+.|+++ |++ +..+..+ ++.+.++ +..++.+.|.++ ||.+.++. .+.++|++++
T Consensus 291 ~~~~l~~~L~~~-g~~~~~~~~~~-~v~~~~~--------------~~~~v~~~L~~~-gi~v~~~~---~~~~iRis~~ 350 (371)
T PRK13520 291 NTRWLAEELKER-GFEPVIEPVLN-IVAFDDP--------------NPDEVREKLRER-GWRVSVTR---CPEALRIVCM 350 (371)
T ss_pred HHHHHHHHHHhC-CCEEecCCCce-EEEEecC--------------CHHHHHHHHHHC-CceeccCC---CCCEEEEEEE
Confidence 999999999988 887 4444444 4556654 567888888876 89887643 4578999987
Q ss_pred c--CHHHHHHHHHHHHHHHh
Q 018665 327 A--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 327 ~--~~~~l~~~~~~l~~~~~ 344 (352)
. +++|++++++.|+++++
T Consensus 351 ~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 351 PHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CCCCHHHHHHHHHHHHHHhh
Confidence 5 89999999999998875
No 160
>PLN02242 methionine gamma-lyase
Probab=99.96 E-value=2.6e-26 Score=209.57 Aligned_cols=290 Identities=21% Similarity=0.277 Sum_probs=207.9
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH-----Hhc
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-----RIA 80 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~-----~~~ 80 (352)
+++...+++ +.+|++++ .+.+++++|+++|+..++.+++++||+|+++.|.|..+...+ +..
T Consensus 74 ~~Pt~~~LE------~~lA~l~g-------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~ 140 (418)
T PLN02242 74 FNPTVLNLG------RQMAALEG-------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKC 140 (418)
T ss_pred CChhHHHHH------HHHHHHhC-------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhcc
Confidence 345556666 99999974 567789999999999999999999999999999998887655 347
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
|.+++.++.. |++++++++++ ++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++|..+.+..
T Consensus 141 G~~~~~~d~~-------d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~-gi~livDea~~~~~~~~ 209 (418)
T PLN02242 141 NITTTFVDIT-------DLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEK-GVTVVVDNTFAPMVLSP 209 (418)
T ss_pred CceEEEcCCC-------CHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHh-CCEEEEECCCCccCCCH
Confidence 8887777642 89999999987 4999999999999999998 99999999999 99999999997653311
Q ss_pred CCccccccCCCCCCceEEEeccccccccccce-eEEEEcChhHHHHHHhhhhc--cccCCChHHHHHHHHHhcccCCChH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
.. .+.++++.|+||.++.+|.+ .||+++++++++.+...... ...+.+...+.+...+... +
T Consensus 210 ------~~----~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l-----~ 274 (418)
T PLN02242 210 ------AR----LGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL-----P 274 (418)
T ss_pred ------HH----cCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC-----C
Confidence 11 23559999999999767766 59999999998888766432 2334555566655555542 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCC-------------------CceEEEeecCCccCCcccCCCCCCChHHH
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-------------------GAFYLFIDFSTYYGSEAEGFGKIENSESL 297 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
.+..+.+++++++..+.+.|+++ ++.+..|. .|-++.+++.+. +.+.++
T Consensus 275 tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~-----------~~~~~f 342 (418)
T PLN02242 275 HLSLRMKEHCRRAMEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTE-----------ERANRL 342 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCH-----------HHHHHH
Confidence 55566778899999999999987 56665432 233455665321 134556
Q ss_pred HHHHHHcc---CEEeccCCCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 298 CRYLLDKA---QVALVPGDAFG-----------------------DDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 298 ~~~l~~~~---gi~i~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+.|.--. .+.+..|+... .++.+|||++.. ++.+.+++.|+.+++..+
T Consensus 343 ~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE-~~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 343 MRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYT-GTLEQRWSQFEKALSAMK 417 (418)
T ss_pred HHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCC-CCHHHHHHHHHHHHHHhh
Confidence 65554100 12233332111 135799999983 236777777777776643
No 161
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.96 E-value=2.3e-26 Score=209.30 Aligned_cols=311 Identities=15% Similarity=0.164 Sum_probs=210.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
+|+....+.+++ +++|++++ ..+.+++++|.+ ++..++.+++++||.|+++.+.|.++...++..+.
T Consensus 38 ~yg~~~~~~~LE------~~lA~~~g------~e~al~~~sG~~-a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~ 104 (392)
T PLN03227 38 FYGTIDAHLELE------QCMAEFLG------TESAILYSDGAS-TTSSTVAAFAKRGDLLVVDRGVNEALLVGVSLSRA 104 (392)
T ss_pred ccCChHHHHHHH------HHHHHHhC------CCcEEEecCcHH-HHHHHHHHhCCCCCEEEEeccccHHHHHHHHHcCC
Confidence 577777788888 99999996 345555555554 45578888999999999999999999988888888
Q ss_pred eEEEecccCCCCcccCHHHHHhhcc-----------CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLT-----------EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~-----------~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+++.++..+. -+++++.+.++ +++++|++++++||+|.+.| ++++.++|+++ |+++|+||+
T Consensus 105 ~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~-g~~livDe~ 176 (392)
T PLN03227 105 NVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEF-HYRLILDES 176 (392)
T ss_pred eEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHc-CCEEEEECc
Confidence 8887775411 13444443442 25788899999999999999 88999999999 999999999
Q ss_pred ccccccCCCCcccccc---CCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCC--ChHHHHHHHH
Q 018665 152 YEHIIYAPATHTSFAS---LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVA 226 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~---~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 226 (352)
|+ +...|........ +....+.++++.|++|.+| ...|++++++++++.+.......+++. +++.+.++.+
T Consensus 177 ~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~ 252 (392)
T PLN03227 177 FS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADAT 252 (392)
T ss_pred cc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHH
Confidence 98 4333322112222 2112355799999999876 345888899998877765433333333 4656666666
Q ss_pred HhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCce----------ecCCCCceEEEeecCCccCCcccCCCCCCChHH
Q 018665 227 ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK----------MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 227 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
++... ...+++.++++++.+++.+.|++. +.. +.....+.++.+.+.+..... .........+
T Consensus 253 al~~~----~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~--~~~~~~~~~~ 325 (392)
T PLN03227 253 ATAGE----LAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSDQEATR--RTDETLILDQ 325 (392)
T ss_pred HHHHH----hcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeCCHHHhh--hhhhhhHHHH
Confidence 66431 113456777888888888888753 222 112234556667764321000 0000001247
Q ss_pred HHHHHHHccCEEeccCC-------CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 297 LCRYLLDKAQVALVPGD-------AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~-------~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+.+.+.++ |+.+.+.. .+-++..+|++++. ++||++++++.|+++++++
T Consensus 326 ~~~~~~~~-Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 326 IAHHSLSE-GVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHC-CCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 88888876 88886532 12346789999988 9999999999999999775
No 162
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.96 E-value=2.5e-26 Score=210.28 Aligned_cols=271 Identities=16% Similarity=0.199 Sum_probs=197.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC----------CCCEEEecCCCCCChH-HHHHhcCCe------------EEEecccCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS----------PGDEVIIPAPFWVSYP-EMARIADAT------------PVILPTRIS 92 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~----------~~~~vl~~~~~~~~~~-~~~~~~g~~------------v~~i~~~~~ 92 (352)
.+.++++++|++|++.+++.+.. ..++|+..+.+|++.. ..+...+.. +..++.
T Consensus 97 ~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 173 (396)
T PRK04073 97 KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY--- 173 (396)
T ss_pred CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC---
Confidence 46899999999999999987631 2367887777666554 343322211 112221
Q ss_pred CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCH-HHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 93 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK-NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~-~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
.|++++++.++++++++++++++||+|..+|. +++++|.++|+++ |+++|+||+|.++.+++... .. ...
T Consensus 174 ----~d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~~-~~-~~~-- 244 (396)
T PRK04073 174 ----GDLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEE-NVLFIADEIQTGLGRTGKLF-AC-DWD-- 244 (396)
T ss_pred ----CCHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhCCCcCcHHH-Hh-hhc--
Confidence 27899999998889999999999999998775 4799999999999 99999999999876655321 11 111
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 251 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (352)
+...-+.++||.+|.+|+|+|++++++++++.+.......+++.+++.+.++.++|+.. .+ +.+.++.+++.++
T Consensus 245 -~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~---~~--~~l~~~~~~~~~~ 318 (396)
T PRK04073 245 -NVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVL---EE--EKLPERSLELGEY 318 (396)
T ss_pred -CCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHH
Confidence 11122456899999777999999999999998876555566778999999999998741 11 2344566667788
Q ss_pred HHHHhccc--CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--
Q 018665 252 LVKSFGEL--EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-- 327 (352)
Q Consensus 252 l~~~l~~~--~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-- 327 (352)
+.+.|+++ +.+..+.+ .|.+++++++. ++.++.++|.++ ||.+.+. .++++|++++.
T Consensus 319 l~~~L~~l~~~~i~~~~~-~g~~~~~~~~~-------------~~~~~~~~l~~~-Gv~~~~~----~~~~iRi~p~l~~ 379 (396)
T PRK04073 319 FKEQLKEIDNPMIKEVRG-RGLFIGVELNE-------------PARPYCEALKEE-GLLCKET----HETVIRFAPPLVI 379 (396)
T ss_pred HHHHHHhhcCCcccceec-ceEEEEEEecc-------------hHHHHHHHHHHC-CeEEecC----CCCEEEEECCccc
Confidence 88888765 23333333 36667787753 567888998876 9998763 25799999765
Q ss_pred CHHHHHHHHHHHHHHH
Q 018665 328 SLTTLQAAVERIKKGL 343 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~ 343 (352)
+++++++++++|++++
T Consensus 380 t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 380 TKEELDWAFEKIKAVL 395 (396)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999875
No 163
>PRK14012 cysteine desulfurase; Provisional
Probab=99.96 E-value=1.6e-26 Score=212.32 Aligned_cols=289 Identities=16% Similarity=0.184 Sum_probs=207.0
Q ss_pred hhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEecCCCCCChHHHH---HhcCCeEEEeccc
Q 018665 18 SFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIADATPVILPTR 90 (352)
Q Consensus 18 ~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~~~~vl~~~~~~~~~~~~~---~~~g~~v~~i~~~ 90 (352)
++++.++++++ .+++++++++|+|++++.++.++. ++||.|+++.++|.++...+ +..|.+++.++++
T Consensus 53 ~~r~~ia~~~g-----~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~ 127 (404)
T PRK14012 53 IARNQIADLIG-----ADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ 127 (404)
T ss_pred HHHHHHHHHcC-----cCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC
Confidence 34488888886 667889999999999998887763 67899999999998876544 4469999999887
Q ss_pred CCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCC
Q 018665 91 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 91 ~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
. ++.+|+++++++++++++++++++++||||.+.| +++|.++|+++ |+++|+|++++. +..+..+..
T Consensus 128 ~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~-g~~vivD~a~~~----g~~~~~~~~--- 194 (404)
T PRK14012 128 S--NGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQD---IAAIGEICRER-GIIFHVDAAQSV----GKVPIDLSK--- 194 (404)
T ss_pred C--CCcCCHHHHHHhcCCCCEEEEEECcCCCccchhh---HHHHHHHHHHc-CCEEEEEcchhc----CCcccCccc---
Confidence 3 4568999999999989999999999999999999 89999999999 999999999875 222222222
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhh-------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
.+-++++.|++|.+| ++ ++|+++++++....+... ......+++.....+..+++... .....+..+
T Consensus 195 -~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~---~~~~~~~~~ 268 (404)
T PRK14012 195 -LKVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA---KEEMATENE 268 (404)
T ss_pred -CCCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH---HhhHHHHHH
Confidence 233478889999876 44 688888776543222211 00112234555555555555531 234556677
Q ss_pred HHHHHHHHHHHHhcccCCceecCC---C--CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC-
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEP---Q--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD- 317 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~---~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~- 317 (352)
+.+++++++.+.|++++++.+..+ . ..+.+++... +..++...|. ++.+..|..|..
T Consensus 269 ~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~---~~~i~~g~~~~~~ 331 (404)
T PRK14012 269 RIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV--------------EGESLIMALK---DLAVSSGSACTSA 331 (404)
T ss_pred HHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc--------------CHHHHHHhCC---CeEEEchhhhCCC
Confidence 888888999999988877766422 1 1223444432 3345655543 566666654422
Q ss_pred ------------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 318 ------------------DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 318 ------------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+.+|+|++. +++|++++++.|+++++.++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 332 SLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred CCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3689999998 89999999999999987763
No 164
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.96 E-value=5.1e-26 Score=205.44 Aligned_cols=285 Identities=14% Similarity=0.172 Sum_probs=202.0
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g 81 (352)
+++...+++ +.+|++.+ .+..++++|+++++..++ .++++||+|+++.|.|.+.. ..++..|
T Consensus 50 ~~pt~~~le------~~la~l~g-------~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 115 (366)
T PRK08247 50 GNPTRGVLE------QAIADLEG-------GDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN 115 (366)
T ss_pred CCchHHHHH------HHHHHHhC-------CCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence 344556677 99999986 233577888899998765 57789999999999999754 3455689
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
++++.++. .|++++++++++++++|++++|+||+|...+ +++|+++|+++ |+++|+|++|.....
T Consensus 116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~~d---l~~I~~la~~~-g~~lIvD~t~~~~~~---- 180 (366)
T PRK08247 116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQETD---IAAIAKIAKKH-GLLLIVDNTFYTPVL---- 180 (366)
T ss_pred ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcHHH---HHHHHHHHHHc-CCEEEEECCCccccc----
Confidence 99998875 2889999999889999999999999876655 99999999999 999999999853111
Q ss_pred ccccccCCCCCCceEEEecccccccc-ccceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..++ ..+.++++.|+||.++. ++.+.|+++++ +++++.+...+...+...+++.+..+...++. +.
T Consensus 181 ~~p~-----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t-------l~ 248 (366)
T PRK08247 181 QRPL-----EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKT-------LA 248 (366)
T ss_pred cCch-----hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCc-------HH
Confidence 1111 13556999999999963 24688999986 67878777666655566777777766665543 34
Q ss_pred HHHHHHHHHHHHHHHHhcccCCcee-cCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHH---------HccCEE
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKM-SEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL---------DKAQVA 308 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~-~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~gi~ 308 (352)
...++.+++++.+.+.|+++|++.. ..| .+|++.| .+... . ...++.+.+. ....+.
T Consensus 249 ~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~-~----------~~~~~~~~l~~~~~~~slg~~~sl~ 316 (366)
T PRK08247 249 LRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE-E----------WVNPFLKSLKLITFAESLGGVESFI 316 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH-H----------HHHHHHHcCCcceEccCCCCCceEE
Confidence 4555678899999999999888864 444 6777665 55321 0 1222222211 122445
Q ss_pred eccCCCCC-------------CCCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 309 LVPGDAFG-------------DDTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 309 i~~g~~~~-------------~~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+.|++.+. .++.+|+|++. |+.+.+++.|+.++..
T Consensus 317 ~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl--E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 317 TYPATQTHADIPEEIRIANGVCNRLLRFSVGI--ENVEDLIADLKQAFKQ 364 (366)
T ss_pred ECCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 55654321 13579999998 3556666666666654
No 165
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=6.8e-26 Score=206.51 Aligned_cols=288 Identities=15% Similarity=0.179 Sum_probs=202.1
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChH-HHHHhcCCeEE---EecccCCC
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADATPV---ILPTRISE 93 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~-~~~~~~g~~v~---~i~~~~~~ 93 (352)
+.+++++. ..+ .+.+++++++++|++.+++... ..+++|++.++.|++.. ......+.... ..+...+.
T Consensus 74 ~~la~~l~~~~~----~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (377)
T PRK02936 74 EEVASLLAENSA----GDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGF 149 (377)
T ss_pred HHHHHHHHhcCC----CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCc
Confidence 77888886 222 3589999999999999998642 23467899888887554 23332221110 11111100
Q ss_pred Cc--ccCHHHHHhhccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCC
Q 018665 94 NF--LLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 94 ~~--~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
.+ ..|++.+++.+.+++++++++.+++++|.. .+.+++++|.++|++| |+++|+||+|.++.++|.. .+......
T Consensus 150 ~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~~-~~~~~~~~ 227 (377)
T PRK02936 150 THVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKF-GALLIIDEVQTGIGRTGTL-FAYEQFGL 227 (377)
T ss_pred eEeCCCCHHHHHHhccCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchh-hHHHhhCC
Confidence 00 027899999998889999999889988876 5788999999999999 9999999999988776642 22222211
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 250 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
. ++ +.++||.++ +|+|+|++++++++.+.+.......+++++++.+.++.++++... .++..++++++.+
T Consensus 228 ~-~d---i~t~sK~l~-~G~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-----~~~~~~~~~~~~~ 297 (377)
T PRK02936 228 D-PD---IVTVAKGLG-NGIPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK-----QPSFLEEVQEKGE 297 (377)
T ss_pred C-Cc---EEEEccccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH-----hccHHHHHHHHHH
Confidence 1 12 447999999 899999999999999888655555567789999999999997521 1233445555555
Q ss_pred HHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEee
Q 018665 251 FLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 326 (352)
Q Consensus 251 ~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~ 326 (352)
.+.+.|++ ++.+..+. ..|+++|+++++ +...+.+.|.++ ||.+.|++ .+++|++++
T Consensus 298 ~l~~~L~~~~~~~~~~~~v~-~~g~~~~i~~~~-------------~~~~~~~~l~~~-gv~v~~~g----~~~lRi~p~ 358 (377)
T PRK02936 298 YFLQKLQEELEHLECVKNIR-GKGLMIGIECTE-------------EVAPVIEQLREE-GLLVLSAG----PNVIRLLPP 358 (377)
T ss_pred HHHHHHHHHHhhCCcEEeEe-ecceEEEEEecc-------------hHHHHHHHHHHC-CeEEecCC----CCEEEEECC
Confidence 55555554 33333233 356789998864 466788877765 89998753 579999974
Q ss_pred c--CHHHHHHHHHHHHHHH
Q 018665 327 A--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 327 ~--~~~~l~~~~~~l~~~~ 343 (352)
. +++++++++++|++++
T Consensus 359 ~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 359 LVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred cccCHHHHHHHHHHHHHhC
Confidence 4 9999999999998764
No 166
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.95 E-value=8.9e-26 Score=205.72 Aligned_cols=287 Identities=16% Similarity=0.183 Sum_probs=206.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc------CCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC------SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 94 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~ 94 (352)
+.+|++++ ++++++++++|+++++..++.++. ++|++|++++++|.++...++..|.+++.++.+ .+
T Consensus 66 ~~la~~~g-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~ 138 (373)
T TIGR03812 66 GSLGNLLH-----LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLD--ED 138 (373)
T ss_pred HHHHHHhC-----CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeC--CC
Confidence 88888886 566788899999999988776653 356899999999999999999999999999986 35
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc-cccccCCC-CC
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPG-MW 172 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~-~~~~~~~~-~~ 172 (352)
+.+|++++++.+++++..+++.+|+||+|...| +++|.++|+++ |+++++|++|+.+...-... .....+.. ..
T Consensus 139 ~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~-~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~ 214 (373)
T TIGR03812 139 YTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALEN-GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLP 214 (373)
T ss_pred CCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHHc-CCeEEEEcCchhHHHHHHhcCCCCCCccccCC
Confidence 668999999999877755555568999999999 99999999999 99999999998543110000 00000000 01
Q ss_pred CceEEEeccccccccccceeEEEE-cChhHHHHHHhhhhccc--------cCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 173 ERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFT--------SGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 173 ~~~i~~~s~sK~~g~~g~~~g~l~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+-..+..|.+|+ ++++.+.|+++ .++++++.+.....+.. .+.+.....++.++++. ...+.+++..+
T Consensus 215 ~~d~~~~s~~K~-~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~--l~~~g~~~~~~ 291 (373)
T TIGR03812 215 GVQSITIDPHKM-GLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKY--LGREGYRKIVA 291 (373)
T ss_pred CCCEEEECcccc-CCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHH--hCHHHHHHHHH
Confidence 223556788894 44666777555 67777776642111111 13445556666666654 12566788889
Q ss_pred HHHHHHHHHHHHhcccCCce-ecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEE
Q 018665 244 AFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 322 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iR 322 (352)
+..++++++.+.|+++ +.. +..+. ..++.+.++ +..++.+.|.++ ||.+.++. .+.++|
T Consensus 292 ~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~--------------~~~~v~~~L~~~-gi~v~~~~---~~~~iR 351 (373)
T TIGR03812 292 ECMENTRYLVEELKKI-GFEPVIEPV-LNIVAFEVD--------------DPEEVRKKLRDR-GWYVSVTR---CPKALR 351 (373)
T ss_pred HHHHHHHHHHHHHHhC-CCeEEcCCC-ceEEEEEeC--------------CHHHHHHHHHHC-CceeccCC---CCCEEE
Confidence 9999999999999988 554 44433 344556554 345788888876 89887642 467999
Q ss_pred EEeec--CHHHHHHHHHHHHH
Q 018665 323 ISYAA--SLTTLQAAVERIKK 341 (352)
Q Consensus 323 i~~~~--~~~~l~~~~~~l~~ 341 (352)
+++.. +++|++++++.|++
T Consensus 352 is~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 352 IVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEECCCCHHHHHHHHHHHhh
Confidence 99985 88999999999976
No 167
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.95 E-value=6.6e-26 Score=209.39 Aligned_cols=289 Identities=16% Similarity=0.193 Sum_probs=200.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHhc-------------CCeEEEecccCC----CCc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-------------DATPVILPTRIS----ENF 95 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~~-------------g~~v~~i~~~~~----~~~ 95 (352)
..+++++++|+++|+..+++.+. .++++|++.+++|+++....... ..++..+|.++. ..+
T Consensus 95 ~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
T cd00610 95 GLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAEL 174 (413)
T ss_pred CCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhH
Confidence 57899999999999999999873 56789999999999876544332 123556665421 123
Q ss_pred ccCHHHHHhhccC---CeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 96 LLDPKVLESKLTE---KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 96 ~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
..|++.|++.+++ ++++++++..++++|..+ +.+++++|.++|+++ |+++|+||+|+++...+.. .......
T Consensus 175 ~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~g~g~~g~~-~~~~~~~-- 250 (413)
T cd00610 175 ADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKH-GILLIADEVQTGFGRTGKM-FAFEHFG-- 250 (413)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcch-hhHhhcC--
Confidence 4588999998865 455666665577889876 677799999999999 9999999999986544431 1111111
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHH--HhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC--NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 249 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (352)
....+.|+||.++ +|+|+|++++++++++.+ .......+++.+++.+.++.++++. .+. .++.++++++.
T Consensus 251 --~~~d~~t~sK~l~-~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~----l~~-~~~~~~~~~~~ 322 (413)
T cd00610 251 --VEPDIVTLGKGLG-GGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEV----LEE-EGLLENAAELG 322 (413)
T ss_pred --CCCCeEEEccccc-CccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHH----HHh-ccHHHHHHHHH
Confidence 1122568899998 689999999999998886 3334445677888888888888864 111 34556677777
Q ss_pred HHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEee
Q 018665 250 DFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 326 (352)
Q Consensus 250 ~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~ 326 (352)
+++.+.|+.+. ++.......|.++++.+++....... .......+.+.|.++ ||.+.|++ ++.+|++++
T Consensus 323 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~-gv~v~~~~----~~~lR~~~~ 394 (413)
T cd00610 323 EYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPP---DKELAAKIIKAALER-GLLLRPSG----GNVIRLLPP 394 (413)
T ss_pred HHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCc---chHHHHHHHHHHHHC-CeEEeecC----CCEEEEECC
Confidence 77777776541 21111234567777777542100000 001456788888876 99999874 678999887
Q ss_pred c--CHHHHHHHHHHHHHHH
Q 018665 327 A--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 327 ~--~~~~l~~~~~~l~~~~ 343 (352)
. +++++++++++|++++
T Consensus 395 ~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 395 LIITEEEIDEGLDALDEAL 413 (413)
T ss_pred CcCCHHHHHHHHHHHHHhC
Confidence 6 8899999999998764
No 168
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.9e-26 Score=196.83 Aligned_cols=309 Identities=17% Similarity=0.173 Sum_probs=237.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i--~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~ 77 (352)
.|-|-.|.++.+ +.+++++- ....-+..+.+ +-|.|||+|+..+..-+. .+..+|.+++|+|..+..++
T Consensus 64 ~Yl~i~G~~~f~------~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If 137 (396)
T COG1448 64 NYLPIEGLPEFL------EAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIF 137 (396)
T ss_pred ccCCcCCcHHHH------HHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHH
Confidence 578888999999 99999985 11111233333 667999999998887663 45567999999999999999
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+..|.++..+|.-+..+..+|.+.+...++. +..++...+.|||||.-++.+++++|+++.++. +.+-++|-+|.+
T Consensus 138 ~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~lip~~D~AYQG 216 (396)
T COG1448 138 EAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-GLIPFFDIAYQG 216 (396)
T ss_pred HhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CCeeeeehhhhh
Confidence 9999999999988777777999998888853 444444567799999999999999999999999 999999999998
Q ss_pred cccCCCCc-cccccCCCCCCceEEEeccccccccccceeEEEEc---ChhH----HHHHHhhhhccccCCChHHHHHHHH
Q 018665 155 IIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHF----VAACNKIQSQFTSGASSISQKAGVA 226 (352)
Q Consensus 155 ~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
|......+ ..++.+.......++..|+||.||+-|.|+|.+.. +.+. ..++....+....+|+..+...++.
T Consensus 217 F~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~ 296 (396)
T COG1448 217 FADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVAT 296 (396)
T ss_pred hccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHH
Confidence 75432111 12222222223479999999999999999998763 3333 3444555555566788899999999
Q ss_pred HhcccCCChHH---HHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 227 ALGLGYAGGEV---VSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 227 ~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
.|++..+..+| +...+.++.++|..+.+.|++. ..+.++..+.|+|.+..+ +.+-+.+
T Consensus 297 IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl----------------s~~QV~r 360 (396)
T COG1448 297 ILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL----------------SPEQVDR 360 (396)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC----------------CHHHHHH
Confidence 99885543444 5566788899999999999874 248888899999876643 3344578
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHH
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKG 342 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~ 342 (352)
|++++||++..++ |||++. ++..++.+.+.|.++
T Consensus 361 Lree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 361 LREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence 8999999998865 999998 999999999998876
No 169
>PLN02651 cysteine desulfurase
Probab=99.95 E-value=3e-26 Score=207.74 Aligned_cols=274 Identities=17% Similarity=0.179 Sum_probs=207.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh----cCCCCEEEecCCCCCChHHHH---HhcCCeEEEecccCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISE 93 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l----~~~~~~vl~~~~~~~~~~~~~---~~~g~~v~~i~~~~~~ 93 (352)
+.++++++ .++++|++++|+|++++.++..+ .++|++|++....|+++...+ +..|.+++.++++ .
T Consensus 50 ~~la~~~g-----~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~ 122 (364)
T PLN02651 50 AQVAALIG-----ADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--S 122 (364)
T ss_pred HHHHHHhC-----CCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--C
Confidence 77888776 66789999999999988877654 467899999998887765443 4579999999886 3
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
++.+|+++++++++++++++++++++|+||...| +++|.++|+++ |+++++|++++. |..+..+.. .+
T Consensus 123 ~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~-g~~~~vD~a~~~----g~~~~~~~~----~~ 190 (364)
T PLN02651 123 DGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---VEEIGELCREK-KVLFHTDAAQAV----GKIPVDVDD----LG 190 (364)
T ss_pred CCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---HHHHHHHHHHc-CCEEEEEcchhh----CCcccCccc----CC
Confidence 4568999999999989999999999999999999 99999999999 999999999985 322233322 34
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhhh-------hccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
.++++.|.+|++| ..++|+++.+++....+.... ....++++.....++.++++.. .+..+++.++.+
T Consensus 191 ~D~~~~s~hK~~g--p~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~---~~~~~~i~~~~~ 265 (364)
T PLN02651 191 VDLMSISGHKIYG--PKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELA---MKEMDYDEKHMK 265 (364)
T ss_pred CCEEEechhhhCC--CCceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHH---HHhHHHHHHHHH
Confidence 5699999999744 346899988876554432211 1234568888888888888762 334577788889
Q ss_pred HHHHHHHHHhcc-cCCceecCCC-----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC---
Q 018665 247 ERRDFLVKSFGE-LEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--- 317 (352)
Q Consensus 247 ~~~~~l~~~l~~-~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--- 317 (352)
+..+++.+.|++ +++++++.+. ....+.+.+++. ++.++.+.|.+ |.+..|..|..
T Consensus 266 ~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~L~~---i~v~~g~~c~~~~~ 330 (364)
T PLN02651 266 ALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYV------------EGESLLMGLKE---VAVSSGSACTSASL 330 (364)
T ss_pred HHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCC------------CHHHHHHHhCC---EEEEchhhcCCCCC
Confidence 999999999985 5788887641 122455556543 78889888753 88888876633
Q ss_pred ----------------CCeEEEEeec--CHHHHH
Q 018665 318 ----------------DTCIRISYAA--SLTTLQ 333 (352)
Q Consensus 318 ----------------~~~iRi~~~~--~~~~l~ 333 (352)
.+.+|+|++. |++||+
T Consensus 331 ~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 331 EPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 2689999998 778764
No 170
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.95 E-value=1.4e-25 Score=204.46 Aligned_cols=218 Identities=12% Similarity=0.167 Sum_probs=169.5
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g 81 (352)
+.++..+++ +++|++.+ .++.++++|+++|+..++.+++++||+|+++.|.|..+... ++..|
T Consensus 62 ~~p~~~~Le------~~iA~~~g-------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 128 (400)
T PRK06234 62 GNPTSTEVE------NKLALLEG-------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYG 128 (400)
T ss_pred CCccHHHHH------HHHHHHhC-------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCC
Confidence 677888999 99999985 35788999999999999999999999999999999876643 46789
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCEEEEecccccccccCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~~livD~~~~~~~~~~~ 160 (352)
.+++.++.. |++++++++++++++|++++|+||+|.+.+ +++|.++|+++ +|+++|+|++|+...+.
T Consensus 129 ~~v~~vd~~-------d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~-- 196 (400)
T PRK06234 129 VEVTFVDTS-------NLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ-- 196 (400)
T ss_pred eEEEEECCC-------CHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC--
Confidence 999998752 789999999889999999999999999999 88999999884 28999999998764321
Q ss_pred CccccccCCCCCCceEEEeccccccccccce-eEEEEcChhHHHHHHhh--hhccccCCChHHHHHHHHHhcccCCChHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
.++ ..+.++++.|++|.++.+|.+ .||+++++++++.++.. ....+...+++....+...++.
T Consensus 197 --~~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t------- 262 (400)
T PRK06234 197 --RPL-----QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT------- 262 (400)
T ss_pred --Cch-----hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-------
Confidence 111 124559999999999867765 59999999988877643 2234455666666655555543
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCc
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGV 262 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~ 262 (352)
+..+.++..++...+.+.|++.|.+
T Consensus 263 l~~r~~~~~~na~~~a~~L~~~~~V 287 (400)
T PRK06234 263 LQIRMEKHCKNAMKVAKFLESHPAV 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 3444555566777788888776554
No 171
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.95 E-value=9.6e-26 Score=206.88 Aligned_cols=277 Identities=12% Similarity=0.175 Sum_probs=199.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChHH-HHHhcC------------CeEEEecccCCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRISEN 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~~-~~~~~g------------~~v~~i~~~~~~~ 94 (352)
.+.+++++||++|+..+++... ...++|+..+..|++... +....+ .++..++.
T Consensus 97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 171 (403)
T PRK05093 97 AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF----- 171 (403)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----
Confidence 4699999999999999998642 123567777777776543 322211 11222221
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccC--CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCC
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSV--YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 172 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~--~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
.|++++++.+.+++++|+++ |.||+|.. .+.+.+++|+++|++| |+++|+||+|+++.++|.. .+.......+
T Consensus 172 --~d~~~l~~~l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~-~~~~~~~~~p 246 (403)
T PRK05093 172 --NDLAAVKAVIDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQH-NALLIFDEVQTGMGRTGDL-FAYMHYGVTP 246 (403)
T ss_pred --CCHHHHHHHhcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccc-hhhhhcCCCC
Confidence 27899999998788888877 66666544 4789999999999999 9999999999988777642 2211111111
Q ss_pred CceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 173 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 173 ~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+ +.|+||.++ +|+|+||+++++++++.+.......+++.+++.|.++.++++.. ...+..+.++++.+++
T Consensus 247 d----i~s~sK~l~-~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~-----~~~~~~~~~~~~~~~l 316 (403)
T PRK05093 247 D----ILTSAKALG-GGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDII-----NTPEVLEGVKARRQRF 316 (403)
T ss_pred C----EEEeccccc-CCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH-----hhccHHHHHHHHHHHH
Confidence 2 678999999 89999999999999988876545556778999999999988641 1234557788888888
Q ss_pred HHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--
Q 018665 253 VKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-- 327 (352)
Q Consensus 253 ~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-- 327 (352)
.+.|+++. ++....+..|.++|+.++.... ..+.++++.|+++ ||.+.+++ .+++|++++.
T Consensus 317 ~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~---------~~~~~~~~~l~~~-Gv~v~~~g----~~~lRl~~~~~~ 382 (403)
T PRK05093 317 VDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK---------GRARDFLNAAAEE-GVMVLVAG----PDVLRFAPSLVI 382 (403)
T ss_pred HHHHHHHHhhCCCeEeEeeCceEEEEEecCcch---------hHHHHHHHHHHHC-CeEEecCC----CCEEEEeCCCCC
Confidence 88888751 1212233568889988864210 0467899998876 89988742 5799997665
Q ss_pred CHHHHHHHHHHHHHHHhhh
Q 018665 328 SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~~~~ 346 (352)
+++++++++++|++++.++
T Consensus 383 ~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 383 EEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8899999999999998653
No 172
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.95 E-value=6.2e-26 Score=206.35 Aligned_cols=281 Identities=18% Similarity=0.249 Sum_probs=220.0
Q ss_pred hhHHHHHHHHhcCCCCCC-CcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChH----HHHHhcCCeEEEeccc
Q 018665 19 FVQQFVINLKENGLSYTP-DQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 90 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~ 90 (352)
..+.++++++ +++ ++|++++|+|++++.++.++ .+++++|++.+..|++.. ...+..|.++..++.+
T Consensus 48 ~r~~la~~lg-----~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~ 122 (371)
T PF00266_consen 48 AREALAKLLG-----APPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD 122 (371)
T ss_dssp HHHHHHHHHT-----SSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG
T ss_pred HHHHHHHhcC-----Cccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccc
Confidence 3388999987 666 89999999999999999998 789999999999998877 3444779999999987
Q ss_pred CCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCC
Q 018665 91 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 91 ~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
.+. .+|+++++++++++++++++++.+|.+|...| +++|.++|+++ |+++++|.+++. |..+..+..
T Consensus 123 ~~~--~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i~~I~~~~~~~-~~~~~vD~~~~~----g~~~id~~~--- 189 (371)
T PF00266_consen 123 PGG--SLDLEDLEEALNPDTRLVSISHVENSTGVRNP---IEEIAKLAHEY-GALLVVDAAQSA----GCVPIDLDE--- 189 (371)
T ss_dssp TTS--SCSHHHHHHHHHTTESEEEEESBETTTTBBSS---HHHHHHHHHHT-TSEEEEE-TTTT----TTSS--TTT---
T ss_pred ccc--hhhhhhhhhhhccccceEEeecccccccEEee---eceehhhhhcc-CCceeEechhcc----ccccccccc---
Confidence 433 58999999999999999999999999999999 99999999999 999999999985 332333332
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh---------------------ccccCCChHHHHHHHHHhc
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS---------------------QFTSGASSISQKAGVAALG 229 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~l~ 229 (352)
.+.+++++|.+| ++ ++.++|+++.+++.+++++.... +...+++.....++..+++
T Consensus 190 -~~~D~~~~s~~K-l~-gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~ 266 (371)
T PF00266_consen 190 -LGADFLVFSSHK-LG-GPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALK 266 (371)
T ss_dssp -TTESEEEEESTS-TT-SSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHH
T ss_pred -cccceeeecccc-cC-CCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHh
Confidence 345589999999 64 44568999999998888742211 1123577777777777776
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC----CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHcc
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 305 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (352)
.- ....++++.++..++.+++.+.|++++++.++.+ ..+..+.+.+++. +..++.+.|.++
T Consensus 267 ~~--~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~L~~~- 331 (371)
T PF00266_consen 267 LL--EEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS------------DADDVVKYLEER- 331 (371)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS------------SHHHHHHHHHHH-
T ss_pred hh--hccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC------------CHHHHHHHHhhc-
Confidence 52 2456788888999999999999999988888543 3344466666554 789999999988
Q ss_pred CEEeccCCCCC--------CCCeEEEEeec--CHHHHHHH
Q 018665 306 QVALVPGDAFG--------DDTCIRISYAA--SLTTLQAA 335 (352)
Q Consensus 306 gi~i~~g~~~~--------~~~~iRi~~~~--~~~~l~~~ 335 (352)
||.+..|..+. ..+.+|+|++. +++|++++
T Consensus 332 ~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 332 GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 99999977665 24899999998 88999875
No 173
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.95 E-value=1.9e-25 Score=202.98 Aligned_cols=286 Identities=14% Similarity=0.154 Sum_probs=201.7
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g 81 (352)
+++...+++ +.+|++++ .+..+++++|++++..++.+++++||+|+++.+.|......+ +..|
T Consensus 59 ~~pt~~~Le------~~lA~l~G-------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 59 GNPTVKLFE------ERMAVLEG-------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred CCcchHHHH------HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 556667788 99999986 334566667778999999999999999999999888766544 3456
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+++..++. .|++++++++++++++|++++|+||+|.+.+ +++|.++|+++ |+++|+|++|+....
T Consensus 126 i~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~-g~~vivD~a~a~~~~---- 190 (386)
T PRK06767 126 ITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRN-GLLVIVDNTFCSPYL---- 190 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHc-CCEEEEECCCccccc----
Confidence 66665543 3789999999889999999999999999999 89999999999 999999999864211
Q ss_pred ccccccCCCCCCceEEEecccccccccccee-EEEEcChhHHHHHHh-hhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNK-IQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..++ ..+.++++.|++|.++.+|.++ |+++++++.++++.+ .........+++.+.++...++ .+.
T Consensus 191 ~~pl-----~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~-------tl~ 258 (386)
T PRK06767 191 QRPL-----ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK-------TLA 258 (386)
T ss_pred CCch-----hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-------cHH
Confidence 1121 1234588999999997677774 889999888777543 3333333456655554444443 345
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecC-C----------CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSE-P----------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~-~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
.+.++.+++...+.+.|+++|++..+. | ..|-++.+++.+.. ++..++.+.|.. .++.
T Consensus 259 ~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~----------~~~~~f~~~l~~-~~~~ 327 (386)
T PRK06767 259 VRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGK----------EETQAFINDLHF-ITIA 327 (386)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCH----------HHHHHHHHhCCc-cEEe
Confidence 566777889999999999998887432 2 12334556664311 146678877753 4666
Q ss_pred eccCCCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 309 LVPGDAFG-----------------------DDTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 309 i~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
+.-|+... .++.+|+|++. |+.+.+++.|..++.
T Consensus 328 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~~al~ 384 (386)
T PRK06767 328 VSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL--ESWEDIVSDLEQALK 384 (386)
T ss_pred cCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Confidence 65554221 13579999999 345666666666664
No 174
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.95 E-value=3.7e-25 Score=201.04 Aligned_cols=210 Identities=15% Similarity=0.186 Sum_probs=163.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++++ .+++++++|+++|+..++.+++++||+|+++.+.|.+... .++..|.+++.++.+
T Consensus 68 ~~la~l~g-------~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~------ 134 (390)
T PRK08133 68 ERLAALEG-------AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT------ 134 (390)
T ss_pred HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC------
Confidence 99999874 4578999999999999999999999999999999987654 456789999999763
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|+++..... ..++ ..+.++
T Consensus 135 -d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~-gi~livD~t~~~~~~----~~pl-----~~g~Di 200 (390)
T PRK08133 135 -DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAA-GALLVVDNCFCTPAL----QQPL-----KLGADV 200 (390)
T ss_pred -CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHc-CCEEEEECCCccccc----CCch-----hhCCcE
Confidence 789999999999999999999999999999 89999999999 999999999864321 1111 123458
Q ss_pred EEecccccccccccee-EEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 255 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (352)
++.|+||.++.+|.++ |+++.+++.++.+..........++++.+..+... .+.+..+.++..+++..+.+.
T Consensus 201 vv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~g-------l~tl~~R~~~~~~~a~~la~~ 273 (390)
T PRK08133 201 VIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKG-------LETLSLRMEAHSANALALAEW 273 (390)
T ss_pred EEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcc-------cchHHHHHHHHHHHHHHHHHH
Confidence 8999999998678776 66778888877776655555444555544333322 235666666677788889999
Q ss_pred hcccCCcee
Q 018665 256 FGELEGVKM 264 (352)
Q Consensus 256 l~~~~g~~~ 264 (352)
|++.|++..
T Consensus 274 L~~~p~v~~ 282 (390)
T PRK08133 274 LEAHPGVER 282 (390)
T ss_pred HHhCCCeeE
Confidence 988877643
No 175
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=1.1e-25 Score=206.96 Aligned_cols=295 Identities=20% Similarity=0.237 Sum_probs=205.5
Q ss_pred CCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHH-HHHHHHHHhcCC--CCEEEecCCCCCChHHHHHhcC-
Q 018665 7 SQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQ-SILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIAD- 81 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~-a~~~~~~~l~~~--~~~vl~~~~~~~~~~~~~~~~g- 81 (352)
..|..+++ +.+++++. ..|. +.+++.+++++++ +...+..++..+ +|+|+++++.|.++...++..+
T Consensus 59 ~~g~~~~~------~~~~~~la~~~g~--~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~ 130 (398)
T cd00613 59 SQGRLQAL------FELQTMLCELTGM--DVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGE 130 (398)
T ss_pred hhhHHHHH------HHHHHHHHHHHCC--CccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcc
Confidence 67888888 88888887 5553 3446777775554 444444455555 8999999999999998888777
Q ss_pred ---CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 82 ---ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 82 ---~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
.+++.++.++ ++.+|++++++.+++++++|++++|+ ++|.+.+ .+++|+++|+++ |+++|+|++++....
T Consensus 131 ~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~--~l~~i~~la~~~-g~~livD~~~~~~~~- 203 (398)
T cd00613 131 PLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQYPN-TLGVFED--LIKEIADIAHSA-GALVYVDGDNLNLTG- 203 (398)
T ss_pred cCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEECCC-CCceecc--hHHHHHHHHHhc-CCEEEEEeccccccC-
Confidence 8999998863 34689999999998899999999885 8999954 359999999999 999999998754211
Q ss_pred CCCccccccCCCCCCceEEEeccccccccc----cceeEEEEcChhHHHHHHhh--------------------------
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMT----GWRLGYIAGPKHFVAACNKI-------------------------- 208 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~~~g~l~~~~~~~~~~~~~-------------------------- 208 (352)
.... ...+.++++.|++|++ .+ |++.|+++.++++++.+...
T Consensus 204 ---~~~~----~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 275 (398)
T cd00613 204 ---LKPP----GEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIR 275 (398)
T ss_pred ---CCCh----HHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcc
Confidence 0111 1134569999999998 34 78899999998887764211
Q ss_pred ---hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE--EEeecCCccCC
Q 018665 209 ---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGS 283 (352)
Q Consensus 209 ---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~--~~~~~~~~~~~ 283 (352)
......+.+.....++..++.. ...+.++++.++++++++++.+.|+++++... +.+.++ ++++++...+
T Consensus 276 ~e~~~~~~~~~~~~~~~~a~~~l~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~~~v~~~~~~~~~- 350 (398)
T cd00613 276 REKATSNICTGQALLALMAAMYIVY--LGPEGLKEIAERAHLNANYLAKRLKEVGGVLP--FNGPFFHEFVLRLPPLYG- 350 (398)
T ss_pred cccccccceecHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--CCCCeeEEEEEEcCCcch-
Confidence 0011122233343334333332 13567888899999999999999998744431 222222 4566653100
Q ss_pred cccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHH
Q 018665 284 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERI 339 (352)
Q Consensus 284 ~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l 339 (352)
.++.++++.|.++ ||.+.... ...++.+|++++. +++|++++++.|
T Consensus 351 --------~~~~~~~~~L~~~-gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 351 --------IRAEDLAKALIDG-GFHAPTMY-LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred --------HHHHHHHHhhhhc-Cccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 1577899998876 88764321 1235789999988 999999998764
No 176
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=1.6e-25 Score=208.34 Aligned_cols=286 Identities=17% Similarity=0.246 Sum_probs=205.5
Q ss_pred chhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEecCCCCCChHHHHHh----cCCeEEEecccC
Q 018665 17 WSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRI 91 (352)
Q Consensus 17 ~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~~~~vl~~~~~~~~~~~~~~~----~g~~v~~i~~~~ 91 (352)
+++.+.++++++ ++.+++.+++|+++++..++.++. +++++|+++++.|.++...++. .|.+++.+++++
T Consensus 115 ~e~~~~la~l~g-----~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~ 189 (447)
T PRK00451 115 FEYQTMICELTG-----MDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED 189 (447)
T ss_pred HHHHHHHHHHhC-----CCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC
Confidence 334455666665 566789999999999998888874 6889999999999988877664 699999999874
Q ss_pred CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe--cccccccccCCCCccccccCC
Q 018665 92 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS--DEIYEHIIYAPATHTSFASLP 169 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv--D~~~~~~~~~~~~~~~~~~~~ 169 (352)
+ .+|++++++++++++++|++++| |+||.+.| +++|.++|+++ |+++++ |.+..+ .. . .+
T Consensus 190 --~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~-~~~~iv~~d~~~~g-----~~-~----~~ 251 (447)
T PRK00451 190 --G-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIED---LEEIAEIAHAG-GALFIVGVDPVSLG-----LL-K----PP 251 (447)
T ss_pred --C-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCC---HHHHHHHHHHC-CCEEEEEcChHHhc-----cC-C----Cc
Confidence 3 68999999999989999999999 88999998 99999999999 999988 433211 10 0 11
Q ss_pred CCCCceEEEe---ccccccccccceeEEEEcChhHHHHHH----------------------------hhhhccccCCCh
Q 018665 170 GMWERTLTVN---GFSKAFAMTGWRLGYIAGPKHFVAACN----------------------------KIQSQFTSGASS 218 (352)
Q Consensus 170 ~~~~~~i~~~---s~sK~~g~~g~~~g~l~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 218 (352)
.+.+.++++. +++|.++++|+++|++++++++++.+. ......+.+.+.
T Consensus 252 ~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (447)
T PRK00451 252 GEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQ 331 (447)
T ss_pred ccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccH
Confidence 2245557776 455666667889999999998888741 111111112222
Q ss_pred HHH-HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEE--eecCCccCCcccCCCCCCChH
Q 018665 219 ISQ-KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIENSE 295 (352)
Q Consensus 219 ~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ 295 (352)
..+ .++..++.. ...++++++.+++.++++++.+.|++++++++. .+.++.+ ++++. +..
T Consensus 332 ~~~~~aaa~~l~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~~-------------~~~ 394 (447)
T PRK00451 332 ALNALAAAIYMSL--LGPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLPK-------------PAE 394 (447)
T ss_pred HHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecCC-------------CHH
Confidence 222 223223321 125778999999999999999999998788876 3344433 44431 578
Q ss_pred HHHHHHHHccCEE-eccCCCCC--CCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 296 SLCRYLLDKAQVA-LVPGDAFG--DDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 296 ~~~~~l~~~~gi~-i~~g~~~~--~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
++.++|.++ ||. ..++..+. ..+++|++++. ++++++++++.|++++
T Consensus 395 ~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 395 EVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 999999977 554 23344333 24699999974 8999999999998765
No 177
>PRK06460 hypothetical protein; Provisional
Probab=99.95 E-value=6e-25 Score=198.72 Aligned_cols=217 Identities=12% Similarity=0.170 Sum_probs=164.4
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC----ChHHHHHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV----SYPEMARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~----~~~~~~~~~g~ 82 (352)
++...+++ +++|++++ ....+++ +++++++..++.+++++||+|+++.+.|. .+...++..|.
T Consensus 44 ~p~~~~L~------~~lA~l~g------~~~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~ 110 (376)
T PRK06460 44 NPTVLELT------KKIVELEN------AEMGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGV 110 (376)
T ss_pred CccHHHHH------HHHHHHhC------CCcEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCc
Confidence 45566777 99999986 2344544 66679999999999999999999987654 34567788999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
++..++.+ +.+.+++.+++++++|++++|+||+|.++| +++|+++|+++ |+++|+|++|+...
T Consensus 111 ~v~~~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~-g~~vivDea~~~~~------ 173 (376)
T PRK06460 111 NVDASNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKEN-GSILIVDATFSTPI------ 173 (376)
T ss_pred EEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCcCccc------
Confidence 99888753 224455555678999999999999999999 78899999999 99999999986421
Q ss_pred cccccCCCCCCceEEEeccccccc-cccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
....+ ..+.++++.|+||.++ ..+.+.|++++++++++.+......++.+.++. .+..++.. .++++.+
T Consensus 174 -~~~~l--~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~---~a~~~l~~----~~~l~~r 243 (376)
T PRK06460 174 -NQKPL--ELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPH---AAYLTLRG----IKTLKIR 243 (376)
T ss_pred -cCChh--hcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHH---HHHHHHhc----hhhHHHH
Confidence 11111 1345699999999985 224679999999999998887766665555543 23333442 5778888
Q ss_pred HHHHHHHHHHHHHHhcccCCce
Q 018665 242 VKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.++..++++.+.+.|++.|.+.
T Consensus 244 ~~~~~~n~~~l~~~L~~~p~v~ 265 (376)
T PRK06460 244 MDVINRNAEQIAEFLEGHPKVV 265 (376)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 8899999999999999876653
No 178
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.95 E-value=7.5e-25 Score=198.33 Aligned_cols=218 Identities=14% Similarity=0.180 Sum_probs=172.2
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g 81 (352)
+.+...+++ +.++++.+ .+..++++|+++|+..++.+++++||+|+++.+.|.+.... ++..|
T Consensus 38 ~~p~~~~le------~~la~l~g-------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g 104 (369)
T cd00614 38 GNPTVDALE------KKLAALEG-------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLG 104 (369)
T ss_pred CChhHHHHH------HHHHHHHC-------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcC
Confidence 345556677 99999875 45778888999999999999999999999999999887643 45788
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.++..++.+ |++++++++++++++|++++|+||+|.+.| +++|+++|+++ |+++|+|++++...+
T Consensus 105 ~~~~~v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~-g~~livD~t~~~~~~---- 169 (369)
T cd00614 105 IEVTFVDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEH-GALLVVDNTFATPYL---- 169 (369)
T ss_pred eEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcchhc----
Confidence 998888753 689999999889999999999999999999 99999999999 999999999875322
Q ss_pred ccccccCCCCCCceEEEecccccccccc-ceeEEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..++ ..+.++++.|++|.+|.+| .+.|++++++ ++++++......++..++++...++...++. +.
T Consensus 170 ~~~~-----~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t-------l~ 237 (369)
T cd00614 170 QRPL-----ELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT-------LP 237 (369)
T ss_pred CChh-----hhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC-------HH
Confidence 1111 1345699999999997454 7899999987 8888888776666666777766655555432 44
Q ss_pred HHHHHHHHHHHHHHHHhcccCCce
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.+.++..++...+.+.|++.|++.
T Consensus 238 ~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 238 LRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcc
Confidence 556677888888999999887654
No 179
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=8.7e-25 Score=198.66 Aligned_cols=217 Identities=16% Similarity=0.180 Sum_probs=168.5
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~ 82 (352)
.+...+++ +.+|++++ .+..++++++++|+..++.+++++||+|+++.++|.++.. .++..|+
T Consensus 63 ~p~~~~le------~~lA~l~g-------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi 129 (398)
T PRK08249 63 NPTVQAFE------EKVRILEG-------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGV 129 (398)
T ss_pred ChHHHHHH------HHHHHHhC-------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCe
Confidence 33445666 99999985 4566788888999999999999999999999999987653 3557899
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
++..++. .|++++++++++++++|++++|+||+|.++| +++|.++|+++ |+++|+|++|+.....
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~-gi~livD~t~a~~~~~---- 194 (398)
T PRK08249 130 DVTLCET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKV-GALVVVDNTFATPINQ---- 194 (398)
T ss_pred EEEEcCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHc-CCEEEEECCcCccccC----
Confidence 8887763 4899999999989999999999999999999 88999999999 9999999998853211
Q ss_pred cccccCCCCCCceEEEecccccccccccee-EEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.++ . .+..+++.|++|.+|..|.++ |++++++++++.+.......+...+++.+..+.+.++. +...
T Consensus 195 ~~l-~----~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t-------L~~R 262 (398)
T PRK08249 195 NPL-A----LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKT-------LKLR 262 (398)
T ss_pred Cch-h----hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch-------HHHH
Confidence 111 1 233488899999997556554 77778888988888776666666777777666555543 4555
Q ss_pred HHHHHHHHHHHHHHhcccCCce
Q 018665 242 VKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.++..+++..+.+.|++.|.+.
T Consensus 263 ~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 263 VRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCee
Confidence 5667788888888888876654
No 180
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.95 E-value=2.6e-25 Score=200.42 Aligned_cols=272 Identities=20% Similarity=0.211 Sum_probs=190.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCC---------------EEEecCCCCCCh----HHHHHhcCCeEEEecccCCCCcc
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGD---------------EVIIPAPFWVSY----PEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~---------------~vl~~~~~~~~~----~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
.+++++++|+|+++..++.+++++|| .|+++.|.|..+ ...+...|.++++++.+ +.
T Consensus 60 ~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~ 135 (363)
T TIGR01437 60 VEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NE 135 (363)
T ss_pred CCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CC
Confidence 45789999999999999999998887 899999777655 46778899999999763 34
Q ss_pred cCHHHHHhhccCCeeEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLTEKSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~-i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
+|++.+++++++++++++ +++++||+|.+.| +++|.++|+++ |+++|+|++|+.- ....... +.+
T Consensus 136 ~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~-gi~vivD~a~~~~------~~~~~~~----g~D 201 (363)
T TIGR01437 136 CSAEQLEAAITEKTAAILYIKSHHCVQKSMLS---VEDAAQVAQEH-NLPLIVDAAAEED------LQKYYRL----GAD 201 (363)
T ss_pred CCHHHHHHhcChhceEEEEEecCCCCcCCcCC---HHHHHHHHHHc-CCeEEEECCCCCc------hHHHHHc----CCC
Confidence 899999999999998766 5678999999999 88999999999 9999999998620 0111111 234
Q ss_pred EEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
+++.|.+|.+ .|++.|+++.++++++.+....... ..........++.++++.. .+...+..+...++++.+.
T Consensus 202 ~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~---~~~~~~~~~~~~~~~~~l~ 276 (363)
T TIGR01437 202 LVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQY---LSTGKESGAEMVAKLTPFI 276 (363)
T ss_pred EEEEeCCccc--CCCceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHH---HccCcccHHHHHHHHHHHH
Confidence 8889999987 4667999999888888764322110 0111112233333444321 1112233334445677899
Q ss_pred HHhcccCCceecCCC--Cc-----eEEEeecCCccCCcccCCCCCCChHHHHHHHHHccC--EEeccCCCCCCCCeEEEE
Q 018665 254 KSFGELEGVKMSEPQ--GA-----FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ--VALVPGDAFGDDTCIRIS 324 (352)
Q Consensus 254 ~~l~~~~g~~~~~~~--~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--i~i~~g~~~~~~~~iRi~ 324 (352)
+.|++++|+++..+. .+ +.+.++.... + .+..++.+.|.++ + |.+++ .+...+.+|++
T Consensus 277 ~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~------g----~~~~~l~~~L~~~-~~~I~~r~--~~~~~~~~~l~ 343 (363)
T TIGR01437 277 EALNTLKGVSASIVQDEAGRDIARAEIRFDESEL------G----MTAADVVQALRQG-EPAIYTRG--YKANEGIIEID 343 (363)
T ss_pred HHHhcCCCeEEEEecCCCCCcCceEEEEEeccCC------C----CCHHHHHHHHhcC-CCCEEEee--eeecCCeEEEE
Confidence 999999998887322 11 1122232110 1 1789999998754 5 55544 45667899999
Q ss_pred eec-CHHHHHHHHHHHHHHH
Q 018665 325 YAA-SLTTLQAAVERIKKGL 343 (352)
Q Consensus 325 ~~~-~~~~l~~~~~~l~~~~ 343 (352)
+.. +++|+++++++|++++
T Consensus 344 ~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 344 PRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred eecCCHHHHHHHHHHHHHhC
Confidence 988 8999999999998763
No 181
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.2e-24 Score=196.96 Aligned_cols=218 Identities=13% Similarity=0.135 Sum_probs=172.5
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH----hcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~----~~g 81 (352)
+++...+++ +.+|++.+ .+++++++|+++++..++.+++++||+|++++|+|.+....+. ..+
T Consensus 50 ~~pt~~~L~------~~lA~l~g-------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 50 GNPTRDVVQ------RALAELEG-------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred CCccHHHHH------HHHHHHhC-------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 445566777 99999975 3579999999999999999999999999999999986554333 345
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.++..++. .|++++++.+++++++|++++|+||||.++| +++|.++|+++ |+++|+|++|.....
T Consensus 117 i~v~~vd~-------~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~-g~~vivDeay~~~~~---- 181 (386)
T PRK08045 117 YRVLFVDQ-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREA-GAVSVVDNTFLSPAL---- 181 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCCcccc----
Confidence 56666541 4889999999889999999999999999999 88999999999 999999999875321
Q ss_pred ccccccCCCCCCceEEEeccccccc-cccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..++ . .+..+++.|++|.++ .++...|++++ ++++++++.......+...+++.+..+...+++ +.
T Consensus 182 ~~pl-~----~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t-------l~ 249 (386)
T PRK08045 182 QNPL-A----LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LV 249 (386)
T ss_pred CCch-h----hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc-------HH
Confidence 1122 1 233499999999994 45567898876 577888887776777777899888888888764 66
Q ss_pred HHHHHHHHHHHHHHHHhcccCCce
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.+.++..+++..+.+.|++.|.+.
T Consensus 250 ~R~~~~~~na~~la~~L~~~p~v~ 273 (386)
T PRK08045 250 PRMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEe
Confidence 667777888888999998877654
No 182
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.94 E-value=1.1e-24 Score=193.04 Aligned_cols=294 Identities=18% Similarity=0.185 Sum_probs=228.4
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCe
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
+|...-+.+|+ +.+|+|++ .+..++.+++-.|+..++.+|++++|.|+...-.|-+..+.++..+.+
T Consensus 80 ~G~~~~h~~LE------~~lA~f~g-------~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~ 146 (388)
T COG0156 80 SGTSDLHVELE------EELADFLG-------AEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAE 146 (388)
T ss_pred cCCcHHHHHHH------HHHHHHhC-------CCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCc
Confidence 34455556677 99999985 667777777788899999999999999999999999999999999999
Q ss_pred EEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
++.+.- .|++.|++.+.+ +.+.|++....+..|.+.| +++|++++++| +.+++|||+|+...+
T Consensus 147 ~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~L~~ky-~a~L~VDEAHa~Gv~ 215 (388)
T COG0156 147 VRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVELAEKY-GALLYVDEAHAVGVL 215 (388)
T ss_pred EEEecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHHHHHHh-CcEEEEEcccccccc
Confidence 999974 388999998864 2577888889999999999 99999999999 999999999997777
Q ss_pred CCCCccccccCCCC-CCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCC
Q 018665 158 APATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 158 ~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
++.+........-. .+++|+++|++|++|..| ||+.++..+++.+....+.+ +.+.++....++.++++.
T Consensus 216 G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~---- 288 (388)
T COG0156 216 GPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRI---- 288 (388)
T ss_pred CCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH----
Confidence 65443333333222 355799999999998777 99999999999988765444 445666666677777775
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~ 314 (352)
.....+.+.++.++..++++.++.. ++.+......+ +.+.+.+.. .+..+.+.|+++ ||.+.+-..
T Consensus 289 l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~~s~s~I-~pv~~gd~~-----------~a~~~s~~l~~~-Gi~v~~i~~ 354 (388)
T COG0156 289 LEEGPERRERLQELAAFFRSLLKAL-GLVLLPSESPI-IPVILGDEE-----------RALEASRALLEE-GIYVSAIRP 354 (388)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHhc-CCccCCCCCCe-eeeEeCCHH-----------HHHHHHHHHHHC-CeeEeeecC
Confidence 4455677788888888888666655 66664433443 444444321 578899999988 999877655
Q ss_pred CCCC---CeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 315 FGDD---TCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 315 ~~~~---~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
..-+ ..+|++++. +++||+++++.|.++
T Consensus 355 PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 355 PTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 4433 579999987 999999999998875
No 183
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.94 E-value=7.8e-25 Score=200.72 Aligned_cols=288 Identities=12% Similarity=0.153 Sum_probs=204.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChHHHHHh-cCCeEE---EecccCC--CCcccCHHH
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYPEMARI-ADATPV---ILPTRIS--ENFLLDPKV 101 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~~~~~~-~g~~v~---~i~~~~~--~~~~~d~~~ 101 (352)
.+.+++++||++|++.+++... .+..+|+..+..|++....... .+.... +.++... .-.-.|++.
T Consensus 96 ~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 175 (406)
T PRK12381 96 ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNS 175 (406)
T ss_pred CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHH
Confidence 4799999999999999998752 1346789988888887643332 221100 0111100 001137899
Q ss_pred HHhhccCCeeEEEEcCCCCCcccC--CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEe
Q 018665 102 LESKLTEKSRLLILCSPSNPTGSV--YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179 (352)
Q Consensus 102 l~~~l~~~~~~i~i~~p~nptG~~--~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 179 (352)
+++.+++++++|++ .|.+++|-+ .|.+.+++|.++|++| |+++|+||++.++.++|.. .........++ +.
T Consensus 176 l~~~l~~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~gr~G~~-~~~~~~~v~pD----i~ 248 (406)
T PRK12381 176 ASALIDDQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRH-NALLIFDEVQTGVGRTGEL-YAYMHYGVTPD----VL 248 (406)
T ss_pred HHHhccCCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEcchhhCCCCCcch-hhhHhhCCCCC----EE
Confidence 99999878877777 577777654 3688999999999999 9999999999988776642 22111111112 46
Q ss_pred ccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc
Q 018665 180 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 259 (352)
Q Consensus 180 s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 259 (352)
+++|.+| +|+++|++++++++++.+.......+++.+++.+.++.++++.. .-++++++++++.+++.+.|+++
T Consensus 249 t~sK~l~-gG~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l-----~~~~~~~~~~~~~~~l~~~L~~l 322 (406)
T PRK12381 249 TTAKALG-GGFPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELI-----NTPEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_pred Eehhhhh-CCCceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH-----hhccHHHHHHHHHHHHHHHHHHH
Confidence 8999998 89999999999999998876555566788999999999988751 12356777888888888888765
Q ss_pred -CCceec--CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHH
Q 018665 260 -EGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQA 334 (352)
Q Consensus 260 -~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~ 334 (352)
....+. ....|.++++++++... .....+.+.|.++ ||.+.+. .++++|++++. +++++++
T Consensus 323 ~~~~~~~~~vrg~Gl~~~~~l~~~~~---------~~~~~~~~~l~~~-Gv~v~~~----g~~~lRl~p~~~~t~~~i~~ 388 (406)
T PRK12381 323 NARYGLFSEIRGLGLLIGCVLNAEYA---------GKAKQISQEAAKA-GVMVLIA----GPNVVRFAPALNISEEEITT 388 (406)
T ss_pred HhhCCCEEEEecCeEEEEEEecCchh---------hHHHHHHHHHHHC-CcEEeeC----CCCEEEEeCCccCCHHHHHH
Confidence 112211 22447778888764210 0356788887765 9998764 25799999885 9999999
Q ss_pred HHHHHHHHHhhhCCCC
Q 018665 335 AVERIKKGLLTLRPGV 350 (352)
Q Consensus 335 ~~~~l~~~~~~~~~~~ 350 (352)
++++|+++++++..+.
T Consensus 389 ~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 389 GLDRFARACERFVSRG 404 (406)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999998886643
No 184
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=1.7e-24 Score=196.95 Aligned_cols=291 Identities=12% Similarity=0.125 Sum_probs=207.8
Q ss_pred HHHHHHHHhcCCCCCCC-cEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChH-HHHHhcCCeEEE--e--cccCC
Q 018665 21 QQFVINLKENGLSYTPD-QILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADATPVI--L--PTRIS 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~-~~~~~~g~~v~~--i--~~~~~ 92 (352)
+.+++.+. ..++ .+++++|+++++..+++... .++++|++.+..|++.. ..+...+.+... + .+...
T Consensus 73 ~~la~~l~-----~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (375)
T PRK04260 73 EEVAQKLI-----GDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHF 147 (375)
T ss_pred HHHHHHHh-----cCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCe
Confidence 77777664 1233 46899999999998888752 34567888888877543 343332221100 0 00000
Q ss_pred C-CcccCHHHHHhhccCCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCC
Q 018665 93 E-NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 93 ~-~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
. ..-.|++.+++.+++++++++++.++|++|... +.+.++++.++|+++ |+++|+||+|.++...+.. .+......
T Consensus 148 ~~~~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~-~~~~i~De~~~g~g~~g~~-~~~~~~~~ 225 (375)
T PRK04260 148 SYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQET-GILLIVDEVQTGMGRTGKL-YAFEHYGI 225 (375)
T ss_pred EEeCCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccch-hhhHhhCC
Confidence 0 001388999998877888999999999999875 467899999999999 9999999999887665532 22111111
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 250 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
.++ +.||||.++ +|+|+|++++++++.+.+.......+++.+++.+.++.++++.... ++..++.++..++.++
T Consensus 226 ~pd----i~t~sK~l~-~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~~~~ 299 (375)
T PRK04260 226 EPD----IFTLAKGLA-NGVPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLT-AGFLEQALENGNYLQE 299 (375)
T ss_pred CCC----EEEeccccc-CCcceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 122 458999998 8999999999999988876544556677899999999999976322 4556777777777777
Q ss_pred HHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--C
Q 018665 251 FLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 328 (352)
Q Consensus 251 ~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~ 328 (352)
.+.+.+.+.+.+..+. ..|+++|++++. +..++.+.+.++ ||.+.|+ ..+.+|++++. +
T Consensus 300 ~l~~~~~~~~~~~~~~-~~g~~~~~~~~~-------------~~~~~~~~l~~~-Gi~v~~~----~~~~lR~~~~~~~t 360 (375)
T PRK04260 300 QLQKALQDKETVTTVR-GLGYMIGIETTA-------------DLSQLVEAARDK-GLIVLTA----GTNVIRLLPPLTLT 360 (375)
T ss_pred HHHHHHhhCCCeeEEe-ccceEEEEEecC-------------cHHHHHHHHHhC-CCEEecC----CCCEEEEcCCCccC
Confidence 7777777653333333 378889998843 577899998876 9999775 25789999965 8
Q ss_pred HHHHHHHHHHHHHHH
Q 018665 329 LTTLQAAVERIKKGL 343 (352)
Q Consensus 329 ~~~l~~~~~~l~~~~ 343 (352)
++++++++++|++++
T Consensus 361 ~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 361 KEEIEQGIAILSEVF 375 (375)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998763
No 185
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=3e-24 Score=193.77 Aligned_cols=218 Identities=14% Similarity=0.142 Sum_probs=170.4
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g 81 (352)
+.+....++ +++|++.+ .+++++++|+++++..++.+++++||+|+++.|+|.+.... ++..|
T Consensus 51 ~npt~~~Le------~~lA~leg-------~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g 117 (388)
T PRK08861 51 GNPNRGLLE------QTLSELES-------GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD 117 (388)
T ss_pred CCchHHHHH------HHHHHHhC-------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence 445566777 99999984 68999999999999999999999999999999999865543 33457
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+++..++. .|++++++++++++++|++++|+||||.++| +++|.++|+++ |+++|+|++|....+
T Consensus 118 i~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~-gi~vIvDea~~~~~~---- 182 (388)
T PRK08861 118 FKVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAV-GALVAVDNTFLTPVL---- 182 (388)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCcccccc----
Confidence 88888752 3889999999889999999999999999999 88999999999 999999999975321
Q ss_pred ccccccCCCCCCceEEEeccccccccc-cceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMT-GWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~-g~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..++ . .+-++++.|.+|.++.+ +...|+++++ +++.++++......+..++++....+...+++ +.
T Consensus 183 ~~pl-~----~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-------l~ 250 (388)
T PRK08861 183 QKPL-E----LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT-------LG 250 (388)
T ss_pred CCCc-c----cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCC-------HH
Confidence 1121 1 23459999999999633 4567888774 56777777666666777888887776666655 45
Q ss_pred HHHHHHHHHHHHHHHHhcccCCce
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
-+.++..++...+.+.|++.|.+.
T Consensus 251 lR~~~~~~~a~~~a~~L~~~p~v~ 274 (388)
T PRK08861 251 ARMRVHEESAQQILAYLQTQSLVG 274 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCee
Confidence 555666777778888888876653
No 186
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=1.8e-24 Score=195.78 Aligned_cols=218 Identities=13% Similarity=0.152 Sum_probs=168.0
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g 81 (352)
+++...+++ +.+|++.+ .+++++++|+++++..++.+++++||+|+++.|+|.++...+ ...+
T Consensus 49 ~~p~~~~le------~~lA~l~g-------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 49 GNPTRDLLQ------QALAELEG-------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred CCchHHHHH------HHHHHHhC-------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 344556677 99999874 578999999999999999999999999999999998765443 3335
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.++..++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|.....
T Consensus 116 ~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~-g~~vvvD~a~~~~~~---- 180 (382)
T TIGR02080 116 FRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAV-GAVVVVDNTFLSPAL---- 180 (382)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCccccc----
Confidence 66666541 3789999999889999999999999999999 88999999999 999999999975321
Q ss_pred ccccccCCCCCCceEEEeccccccc-cccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..++ .+ +.++++.|++|.++ .++++.|+++. ++++++++.......+...+++....+...++ .+.
T Consensus 181 ~~pl-~~----gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~-------tl~ 248 (382)
T TIGR02080 181 QNPL-AL----GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR-------TLV 248 (382)
T ss_pred CCch-hh----CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc-------hHH
Confidence 1121 11 23489999999985 46778999876 67788888777666677788877765544443 344
Q ss_pred HHHHHHHHHHHHHHHHhcccCCce
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.+.++..++...+.+.|+..|.+.
T Consensus 249 ~R~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 249 ARMRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCee
Confidence 556667788888888888776654
No 187
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.94 E-value=2.1e-24 Score=195.83 Aligned_cols=217 Identities=14% Similarity=0.192 Sum_probs=167.5
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADAT 83 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~ 83 (352)
+...+++ +.++++++ .+.+++++|+++++..++.+++++||+|+++.+.|.+.. ..++..|.+
T Consensus 54 p~~~~le------~~la~l~g-------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~ 120 (380)
T TIGR01325 54 PTVAAFE------ERIAALEG-------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIE 120 (380)
T ss_pred chHHHHH------HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCE
Confidence 3455666 99999875 367888999999999999999999999999999887643 456778999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
+..++.+ |++++++++++++++|++++|+||+|...+ +++|.++|+++ |+++|+|+++..... ..
T Consensus 121 v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~-gi~livD~a~~~~~~----~~ 185 (380)
T TIGR01325 121 VSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAI-GALLVVDNVFATPVL----QQ 185 (380)
T ss_pred EEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCccccc----CC
Confidence 9988753 789999999889999999999999999999 99999999999 999999999875321 11
Q ss_pred ccccCCCCCCceEEEecccccccccccee-EEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
++ ..+.++++.|++|.++.+|.++ |++++++++++.++......+...+++....+... .+.+..+.
T Consensus 186 pl-----~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~-------l~tl~~r~ 253 (380)
T TIGR01325 186 PL-----KLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKG-------LETLSLRM 253 (380)
T ss_pred ch-----hhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhc-------cCcHHHHH
Confidence 11 1244589999999997667665 77888988888887765555545555554433333 34455566
Q ss_pred HHHHHHHHHHHHHhcccCCcee
Q 018665 243 KAFRERRDFLVKSFGELEGVKM 264 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~ 264 (352)
++..+++..+.+.|+++|++..
T Consensus 254 ~~~~~~a~~la~~L~~~p~v~~ 275 (380)
T TIGR01325 254 QKQFDSALAIAEWLQAQPQVQA 275 (380)
T ss_pred HHHHHHHHHHHHHHHcCCCccE
Confidence 7777788888899988776543
No 188
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=6.4e-25 Score=190.84 Aligned_cols=291 Identities=15% Similarity=0.222 Sum_probs=209.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC-----CCCEEEecCCCCCC-hHHHHHhcCC------------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS-----PGDEVIIPAPFWVS-YPEMARIADA------------ 82 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-----~~~~vl~~~~~~~~-~~~~~~~~g~------------ 82 (352)
..+++.+...-. ..+.+++.||++||++.+++...+ ...+|+.....|++ +..++...+-
T Consensus 87 ~~la~~L~~~s~--~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~ 164 (404)
T COG4992 87 AELAEKLVELSP--FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLP 164 (404)
T ss_pred HHHHHHHHhhCc--cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCC
Confidence 555555541110 378999999999999999987532 12467766665553 3333322111
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.++.+|. -|++.+++++++++.+|++...+...|... |.+.++++.++|+++ |+++|.||++.++..+|+.
T Consensus 165 g~~~vpf-------nDi~al~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~-g~LLI~DEVQtG~GRTGk~ 236 (404)
T COG4992 165 GFRHVPF-------NDIEALEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEH-GALLILDEVQTGLGRTGKL 236 (404)
T ss_pred CceecCC-------CCHHHHHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHh-CeEEEEeccccCCCccchH
Confidence 2223332 289999999999999999999999999775 566899999999999 9999999999999888753
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
+ .+.. ++...-+.++.|.+| +|.++|.+++++.+.+.+....+.++++.|+++++++.++++.-.. ++.
T Consensus 237 f-A~e~----~gV~PDI~tlaK~Lg-GG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~-e~l---- 305 (404)
T COG4992 237 F-AYEH----YGVEPDILTLAKALG-GGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE-EGL---- 305 (404)
T ss_pred H-HHHH----hCCCCCEEEeecccc-CCccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc-hhH----
Confidence 2 1111 122233777889999 8899999999976677777777788899999999999999986321 333
Q ss_pred HHHHHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 242 VKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
.++.++.-+++.+.|++ ++-++-+ ..-|.++-+++.... .+.++.+.+.++ |+++.+. .
T Consensus 306 l~~v~~~g~~~~~~L~~l~~~~~~v~~v-RG~GLmiGiel~~~~-----------~a~~~~~~~~~~-gvL~~~a----~ 368 (404)
T COG4992 306 LENVREKGEYLLQRLRELKRRYPLVKEV-RGRGLMIGIELKEPY-----------RARDIVRALREE-GVLVLPA----G 368 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeee-ecceeEEEEEecCcc-----------cHHHHHHHHHHC-CeEEecC----C
Confidence 44444455555555554 3312222 244777777776531 378899998876 8988775 3
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
++.+|+.++. ++|++++++++|++++..+..+
T Consensus 369 ~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~~ 402 (404)
T COG4992 369 PNVIRFLPPLVITEEEIDEALDALERALAAASAR 402 (404)
T ss_pred CCeEEecCCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 6799999998 9999999999999999876543
No 189
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.94 E-value=1.8e-24 Score=196.95 Aligned_cols=218 Identities=14% Similarity=0.187 Sum_probs=163.9
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g 81 (352)
+.+...+++ +.+|++++ .+...+++++++++..++.+++++||+|+++.+.|..+... ++..|
T Consensus 63 ~~p~~~~Le------~~lA~l~G-------~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 129 (398)
T PRK07504 63 SNPTVDMFE------KRMCALEG-------AEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYG 129 (398)
T ss_pred CCchHHHHH------HHHHHHhC-------CCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence 345556777 99999986 33344578889999888888889999999999999976544 34678
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++. .|++++++++++++++|++++|+||+|.+.| +++|.++|+++ |+++|+|++|+...+
T Consensus 130 ~~v~~vd~-------~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~-gi~lvvD~a~a~~~~---- 194 (398)
T PRK07504 130 IESTLVDG-------LDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQA-GAKLVVDNVFATPLF---- 194 (398)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHc-CCEEEEECCcccccc----
Confidence 88888851 5899999999999999999999999999999 99999999999 999999999875322
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeE-EEEcChhHHH-HHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g-~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..++ . .+.++++.|++|.++.+|.++| +++.+++++. .++......+..++++....+...++. +.
T Consensus 195 ~~~~-~----~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t-------l~ 262 (398)
T PRK07504 195 QKPL-E----LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET-------LP 262 (398)
T ss_pred CCch-h----hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch-------HH
Confidence 1111 1 2455899999999977888875 6667777665 344433444445666666555555543 45
Q ss_pred HHHHHHHHHHHHHHHHhcccCCce
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.+.++..++...+.+.|++.|++.
T Consensus 263 ~R~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 263 VRVRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcc
Confidence 555666678888888888877654
No 190
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.94 E-value=1.3e-24 Score=199.63 Aligned_cols=281 Identities=15% Similarity=0.186 Sum_probs=198.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC----------CCCEEEecCCCCCChHHHHHhcCC--------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS----------PGDEVIIPAPFWVSYPEMARIADA-------- 82 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----------~~~~vl~~~~~~~~~~~~~~~~g~-------- 82 (352)
+.++++. ..+.+++++|+++|++.+++.+.. ..++|++....|++....+...+.
T Consensus 90 ~~l~~~~-------~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~ 162 (401)
T PRK00854 90 EELAALT-------GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGF 162 (401)
T ss_pred HHHHhhC-------CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccC
Confidence 5555553 246899999999999999998742 125788877777665433332221
Q ss_pred -----eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 83 -----TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 83 -----~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
.+..++. .|++++++.+.+++++|++++|+||+|.+.| .+++++|.++|+++ |+++|+||++.++.
T Consensus 163 ~~~~~~~~~~~~-------~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~-gi~lI~DEv~~g~g 234 (401)
T PRK00854 163 GPFTPGFRVVPF-------GDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTAN-NVTLILDEIQTGLG 234 (401)
T ss_pred CCCCCCeEEeCC-------CCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCC
Confidence 2222321 3789999999889999999999999999887 45699999999999 99999999998776
Q ss_pred cCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCCh
Q 018665 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
+.|.. ..........+ +++ ++|.++ +| +|+|++++++++++.+.......+++.+++.+.++.++++. .
T Consensus 235 ~~g~~-~~~~~~g~~~D--~~~--~~K~l~-gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~----l 304 (401)
T PRK00854 235 RTGKL-LAEEHEGIEAD--VTL--IGKALS-GGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKV----L 304 (401)
T ss_pred CCchH-hHHhhcCCCCC--EEE--eccccc-CCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHH----H
Confidence 65531 11111111112 333 469997 55 69999999999988876555555667899999999999875 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCC--ceecCCCCceEEEeec-CCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEG--VKMSEPQGAFYLFIDF-STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g--~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
+. ..+.+.++++.+++.+.|+++.. +....+. |.++.+.+ ++. .+..++++.|.++ ||.+.+.
T Consensus 305 ~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~-g~~~~i~~~~~~-----------~~~~~~~~~L~~~-GV~v~~~ 370 (401)
T PRK00854 305 TE-EGMIENAAEMGAYFLEGLRSIRSNIVREVRGR-GLMLAVELEPEA-----------GGARQYCEALKER-GLLAKDT 370 (401)
T ss_pred HH-cCHHHHHHHHHHHHHHHHHhhccCceEEEecc-ceEEEEEEecCc-----------hhHHHHHHHHHHC-CeEEecC
Confidence 11 33567778888888888887622 1112333 44444444 221 1567899999976 9998653
Q ss_pred CCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 313 DAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
.++++|++++. +++++++++++|++++.
T Consensus 371 ----~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 371 ----HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred ----CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 25799999864 99999999999998864
No 191
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.94 E-value=1.6e-24 Score=199.65 Aligned_cols=309 Identities=11% Similarity=0.083 Sum_probs=208.1
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHhcCCeE-------------
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATP------------- 84 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~~g~~v------------- 84 (352)
..+|+++. ..+.+. .+.++++++|++|++.+++... .+..+|+...++|++....+...+...
T Consensus 87 ~~la~~l~~~~~~~~-~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (425)
T PRK08088 87 LELCEKMNQKVPGDF-AKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGH 165 (425)
T ss_pred HHHHHHHHHhCCCCC-CCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCC
Confidence 44555554 233221 2578889999998888887642 223567777999988875554433211
Q ss_pred -EE--ecccCCCCccc--CHHHHHhhcc-----CCeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 85 -VI--LPTRISENFLL--DPKVLESKLT-----EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 85 -~~--i~~~~~~~~~~--d~~~l~~~l~-----~~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
.. +|.+. .+... +++.+++.++ ++.+++++... ++++...++.+++++|.++|+++ |+++|+||+++
T Consensus 166 ~~~~~~p~~~-~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~-~~~lI~Dev~~ 243 (425)
T PRK08088 166 VYRALYPCPL-HGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEH-GIMLIADEVQT 243 (425)
T ss_pred cEEcCCCccc-cCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecccc
Confidence 11 22111 11111 1556777764 45666666555 45666778999999999999999 99999999999
Q ss_pred ccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCC
Q 018665 154 HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
++.+.+. ..++.. .+.++.+.|+||.++ +|+|+||+++++++++.+.......+++.+++.+.++.++++....
T Consensus 244 g~g~~g~-~~~~~~----~~~~pdi~s~sK~l~-~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~ 317 (425)
T PRK08088 244 GAGRTGT-LFAMEQ----MGVAADLTTFAKSIA-GGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ 317 (425)
T ss_pred CCCcCcc-hhHHhh----cCCCCCEEEEecccc-CCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 8766543 122211 123344899999998 9999999999999999887766677788999999999999987432
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
++.++++++..+++++.+.+.+.+.|.+..+.+. |+++|+.+.+........ .....++.+.+.++ ||.+.++.
T Consensus 318 -~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~~~p~---~~~~~~l~~~~~~~-Gv~~~~~~ 391 (425)
T PRK08088 318 -ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHSKPN---AKLTAQIVARARDK-GLILLSCG 391 (425)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCCCCCC---HHHHHHHHHHHHhC-CCEEecCC
Confidence 4555666666555566565555555443333333 888999984321100000 01367788888876 88887754
Q ss_pred CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 314 AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 314 ~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+ ++.+|++++. +++++++++++|++++++.
T Consensus 392 ~~--~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 392 PY--YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CC--CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 43 5789999995 8999999999999999764
No 192
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.94 E-value=3e-25 Score=200.58 Aligned_cols=276 Identities=18% Similarity=0.147 Sum_probs=203.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC----CC-CEEEecCCCCCChHH---HHHhcCCeEEEecccCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS----PG-DEVIIPAPFWVSYPE---MARIADATPVILPTRIS 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~~-~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~ 92 (352)
+.++++++ .++++|++++|++++++.++.++.. ++ +.|++....|+++.. .++..|.+++.++++.
T Consensus 49 ~~la~~~g-----~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~- 122 (353)
T TIGR03235 49 KQVAEALG-----ADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE- 122 (353)
T ss_pred HHHHHHhC-----CCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC-
Confidence 88888886 6778999999999999988888752 45 678888877776654 3456799999999863
Q ss_pred CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCC
Q 018665 93 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 172 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
++.+|++.+++.++++++++++++++||||...| +++|.++|+++ |+++++|++++.. ..+..+. ..
T Consensus 123 -~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~-~~~~ivD~a~~~g----~~~~~~~----~~ 189 (353)
T TIGR03235 123 -SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---IREIAEVLEAH-EAFFHVDAAQVVG----KITVDLS----AD 189 (353)
T ss_pred -CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---HHHHHHHHHHc-CCEEEEEchhhcC----Ccccccc----cc
Confidence 4568999999999888999999999999999999 89999999999 9999999998752 2222222 13
Q ss_pred CceEEEeccccccccccceeEEEEcChhHHHH--HHhh-------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 173 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA--CNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 173 ~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+.++++.|.+|++|.+ ++|+++.+++.... +... ......+++.....++.++++. .....++..+
T Consensus 190 ~~D~~~~s~~K~~gp~--g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~ 264 (353)
T TIGR03235 190 RIDLISCSGHKIYGPK--GIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEI---ARRNAQAWEV 264 (353)
T ss_pred CCCEEEeehhhcCCCC--ceEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHH---HHhhHHHHHH
Confidence 4558888999987633 48999888765322 1110 1122345777777777777775 2345678888
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCC---ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC-
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT- 319 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~- 319 (352)
+++++++++++.|++ +|+++..+.. ..++.+.+++. +.+++.+.|. + +|.+.+|..|+...
T Consensus 265 ~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~~------------~~~~v~~~L~-~-~i~v~~g~~~~~~~~ 329 (353)
T TIGR03235 265 KLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDGV------------NSEALIVNLR-A-DAAVSTGSACSSSKY 329 (353)
T ss_pred HHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCCc------------CHHHHHHHHh-C-CeEEEchhhcCCCCC
Confidence 999999999999988 5988874322 22344444532 6788888885 5 79999998886443
Q ss_pred ---eEEEEeecCHHHHHHH
Q 018665 320 ---CIRISYAASLTTLQAA 335 (352)
Q Consensus 320 ---~iRi~~~~~~~~l~~~ 335 (352)
.+|.+++.+++++..+
T Consensus 330 ~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 330 EPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred CCCHHHHHcCCCHHHhCcc
Confidence 6788888866555443
No 193
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=8.8e-24 Score=190.46 Aligned_cols=216 Identities=11% Similarity=0.112 Sum_probs=170.7
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCCe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADAT 83 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~~ 83 (352)
+....++ +.+|++.+ .+++++++|+++|+..++.+++++||+|++++|.|.++... ++..|.+
T Consensus 61 pt~~~Le------~~iA~le~-------~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~ 127 (394)
T PRK09028 61 PTHFAFQ------AAIVELEG-------GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIE 127 (394)
T ss_pred chHHHHH------HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceE
Confidence 3445777 99998863 46889999999999999999999999999999999888753 4567888
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
+..++.. +.+.+++.+++++++|++++|+||+|.+.+ +++|+++|+++ |+++++|++|+.. ....
T Consensus 128 v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v~d---l~~I~~la~~~-g~~lvvD~t~a~p----~~~~ 192 (394)
T PRK09028 128 TTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIAHEH-DIVVMLDNTWASP----INSR 192 (394)
T ss_pred EEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHHHc-CCEEEEECCcccc----ccCC
Confidence 8877532 457899999889999999999999999887 99999999999 9999999999741 1111
Q ss_pred ccccCCCCCCceEEEecccccc-ccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~-g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
++ +.+-++++.|.+|++ |.++.-.|+++.++++.+.+.......+..++++....+...+++ +.-+.
T Consensus 193 Pl-----~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-------L~lR~ 260 (394)
T PRK09028 193 PF-----EMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRT-------LGVRL 260 (394)
T ss_pred cc-----ccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-------HHHHH
Confidence 21 245669999999999 434566788877888777777665556667888877776666654 55666
Q ss_pred HHHHHHHHHHHHHhcccCCce
Q 018665 243 KAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~ 263 (352)
++..++...+.+.|++.|.+.
T Consensus 261 ~~~~~na~~la~~L~~~p~v~ 281 (394)
T PRK09028 261 AQHEKNALKVANWLATRPEVD 281 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCcc
Confidence 677778888999998887653
No 194
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=9.6e-24 Score=192.09 Aligned_cols=209 Identities=13% Similarity=0.175 Sum_probs=161.9
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC----hHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~----~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++.+ ..+. +++++|++++..++.+++++||+|+++.|.|.+ +...++..|.+++.++.
T Consensus 67 ~~lA~l~g------~~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~------- 132 (405)
T PRK08776 67 EALAELEG------GAGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL------- 132 (405)
T ss_pred HHHHHHhC------CCce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC-------
Confidence 88888875 3344 566666899999999999999999999999987 34455667888888864
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++|... ....++. .+.++
T Consensus 133 ~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~-gi~vIvD~a~a~~----~~~~pl~-----~gaDi 199 (405)
T PRK08776 133 TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKV-GALTVVDNTFLSP----ALQKPLE-----FGADL 199 (405)
T ss_pred CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHc-CCEEEEECCCccc----ccCCccc-----ccCCE
Confidence 2789999999889999999999999999988 99999999999 9999999998742 1112221 23348
Q ss_pred EEeccccccccc-cceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMT-GWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 177 ~~~s~sK~~g~~-g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
++.|.+|.++.+ +...|+++. ++++.+++.......+..++++.+.++... .++++.+.++..++...+.+
T Consensus 200 vv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~g-------l~tl~~r~~~~~~na~~la~ 272 (405)
T PRK08776 200 VLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRG-------LRTLDARLRVHQENADAIAA 272 (405)
T ss_pred EEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhh-------hCcHHHHHHHHHHHHHHHHH
Confidence 999999999644 466788876 567777776655555556777776665544 45577788888889999999
Q ss_pred HhcccCCce
Q 018665 255 SFGELEGVK 263 (352)
Q Consensus 255 ~l~~~~g~~ 263 (352)
.|++.|.+.
T Consensus 273 ~L~~~p~v~ 281 (405)
T PRK08776 273 LLDGHAAVN 281 (405)
T ss_pred HHHcCCCee
Confidence 998877654
No 195
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.94 E-value=5.2e-24 Score=194.22 Aligned_cols=217 Identities=15% Similarity=0.168 Sum_probs=164.1
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~ 82 (352)
.+...+++ +.++++++ .++.++++|+++++..++.+++++||+|+++.+.|.... ..++..|+
T Consensus 64 ~p~~~~le------~~lA~l~g-------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~ 130 (403)
T PRK07503 64 NPTLALLE------QRMASLEG-------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGV 130 (403)
T ss_pred CchHHHHH------HHHHHHhC-------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCE
Confidence 33455666 99999985 334577778889999999999999999999999987643 34567899
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++.. |++++++++++++++|++++|+||+|.+.+ +++|.++|+++ |+++|+|++|+.... .
T Consensus 131 ~v~~vd~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~-gi~lIvD~a~a~~~~----~ 195 (403)
T PRK07503 131 TVRHVDLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGA-GAKVVVDNTYCTPYL----Q 195 (403)
T ss_pred EEEEeCCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCccccc----C
Confidence 99988763 789999999889999999999999999999 99999999999 999999999975321 1
Q ss_pred cccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh--hhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
.++ . .+.++++.|++|.+|.+| .+.|+++.+++++++++.. ....+..++++.+..+...++ .+.
T Consensus 196 ~~l-~----~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~-------tl~ 263 (403)
T PRK07503 196 RPL-E----LGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK-------TLA 263 (403)
T ss_pred Cch-h----hCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc-------hHH
Confidence 122 1 234499999999998554 6789999888888887632 333445566666655544443 344
Q ss_pred HHHHHHHHHHHHHHHHhcccCCce
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.+.++..++...+.+.|++.|.+.
T Consensus 264 ~r~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 264 LRMDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcc
Confidence 445555567778888888776654
No 196
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.94 E-value=6.8e-24 Score=192.72 Aligned_cols=218 Identities=11% Similarity=0.148 Sum_probs=165.4
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~ 82 (352)
.+...+++ +.+|++++ .+..++++|+++++..++.+++++||+|+++.+.|.... ..+...|+
T Consensus 58 ~p~~~~le------~~lA~l~g-------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~ 124 (391)
T TIGR01328 58 NPTVSNLE------GRIAFLEG-------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGI 124 (391)
T ss_pred CchHHHHH------HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCe
Confidence 34455677 99999986 345788888899999999999999999999999887544 34556899
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
++..++++ |++.+++++++++++|++++|+||+|.+.+ +++|.++|+++ |+++|+|++++.... .
T Consensus 125 ~~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~-gi~livD~a~a~~~~----~ 189 (391)
T TIGR01328 125 QVDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQ-GVKVIVDNTFATPML----T 189 (391)
T ss_pred EEEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCchhcc----C
Confidence 99888763 789999999889999999999999999999 88999999999 999999999875321 1
Q ss_pred cccccCCCCCCceEEEeccccccccccce-eEEEEcChhHHHHHHhhhh--ccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
.++ ..+..+++.|++|.+|.+|.+ .|+++.++++++.++.... ..+...+++....+...++ .+.
T Consensus 190 ~~~-----~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~-------tl~ 257 (391)
T TIGR01328 190 NPV-----ALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK-------TLN 257 (391)
T ss_pred Cch-----hcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC-------cHH
Confidence 111 123448999999999867765 5788889998888775432 2233455555554444443 344
Q ss_pred HHHHHHHHHHHHHHHHhcccCCcee
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKM 264 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~ 264 (352)
.+.++.+++...+.+.|++.|++..
T Consensus 258 ~r~~~~~~na~~la~~L~~~p~v~~ 282 (391)
T TIGR01328 258 IRMKRHSENAMKVAEYLKSHPAVEK 282 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccE
Confidence 5566777788888888888776543
No 197
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.94 E-value=9.9e-25 Score=201.57 Aligned_cols=312 Identities=15% Similarity=0.176 Sum_probs=205.9
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh---c
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI---A 80 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~---~ 80 (352)
+..+..+++ +++++++. ..+++++++|+++|++.+++... ...++|+...+.|+++...+.. .
T Consensus 86 ~~~~~~~la------e~l~~~~~------~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~ 153 (423)
T TIGR00713 86 PTEAEILLA------KEIISRVP------SVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGS 153 (423)
T ss_pred CCHHHHHHH------HHHHHhCC------cccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccC
Confidence 455666777 88888763 34789999999999999888642 2458999999999987643332 1
Q ss_pred CCeEEEecccCC-------CCc---ccCHHHHHhhcc---CCeeEEEEc-CCCCCcccCCC-HHHHHHHHHHHHhCCCEE
Q 018665 81 DATPVILPTRIS-------ENF---LLDPKVLESKLT---EKSRLLILC-SPSNPTGSVYP-KNLLDEIARIVAKHPRLL 145 (352)
Q Consensus 81 g~~v~~i~~~~~-------~~~---~~d~~~l~~~l~---~~~~~i~i~-~p~nptG~~~~-~~~l~~l~~~~~~~~~~~ 145 (352)
+......+..+. ... ..|++++++.++ +++++|+++ .++| +|.+.+ .+++++|.++|++| |++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~-~~l 231 (423)
T TIGR00713 154 GAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEY-GSL 231 (423)
T ss_pred cccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHh-CCE
Confidence 111111111000 000 027899998886 567888875 5566 787777 68999999999999 999
Q ss_pred EEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHh---hhhccccCCChHHHH
Q 018665 146 VLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK---IQSQFTSGASSISQK 222 (352)
Q Consensus 146 livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 222 (352)
+|+||+|.++.+ +.. .........++ +.++||.++ +|+|+|++++++++++.+.. .....+++.+++.+.
T Consensus 232 lI~DEv~~g~r~-g~~-~~~~~~~~~pD----i~t~sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~a 304 (423)
T TIGR00713 232 LIFDEVMTGFRV-ALG-GAQEYFGVEPD----LTTLGKIIG-GGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMA 304 (423)
T ss_pred EEEEcccccccc-Ccc-hhHHHhCCCcc----hhhhhhhhc-CCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHH
Confidence 999999998733 321 11111111112 457999999 89999999999999988863 224456789999999
Q ss_pred HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec-CCCCceEEEeecCCccCCccc--CCCCCCChHHHHH
Q 018665 223 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAE--GFGKIENSESLCR 299 (352)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 299 (352)
++.++++.... ....+++.+..+++++.+.+.++++ ++... .+.+++ +.+.+......... ..........+.+
T Consensus 305 aa~a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (423)
T TIGR00713 305 AGLATLKLLDE-EGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSM-FSLFFTEEEVTNYADAKKSDTELFAKFFH 381 (423)
T ss_pred HHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccE-EEEEEecCCCCChhhhhcccHHHHHHHHH
Confidence 99999875221 2356777777777777788777776 54432 333443 33333211000000 0000001236778
Q ss_pred HHHHccCEEeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 300 YLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 300 ~l~~~~gi~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
.|+++ ||.+.++. .+.+|++++.+++++++++++|.++++++
T Consensus 382 ~l~~~-Gv~v~~~~----~~~~~l~~~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 382 EMLDK-GVFLPPSQ----FEACFLSAAHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHC-CeEEecCC----ccceeeECCCCHHHHHHHHHHHHHHHhhC
Confidence 88865 99986542 24689998889999999999999998753
No 198
>PLN00144 acetylornithine transaminase
Probab=99.94 E-value=2.7e-24 Score=195.03 Aligned_cols=284 Identities=14% Similarity=0.096 Sum_probs=195.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc---CC------------CCEEEecCCCCCChHHHHHh-cCCeE---EEecccCCCC--
Q 018665 36 PDQILVSNGAKQSILQAVLAVC---SP------------GDEVIIPAPFWVSYPEMARI-ADATP---VILPTRISEN-- 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~---~~------------~~~vl~~~~~~~~~~~~~~~-~g~~v---~~i~~~~~~~-- 94 (352)
.+.+++++++++|++.+++... .+ ..+|+....+|++....+.. .+... .+.+..+...
T Consensus 72 ~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~ 151 (382)
T PLN00144 72 ADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFV 151 (382)
T ss_pred CCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEe
Confidence 4689999999999999998642 10 25688888888876643332 22110 0011100000
Q ss_pred cccCHHHHHhhcc-CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc-cccCCCC
Q 018665 95 FLLDPKVLESKLT-EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGM 171 (352)
Q Consensus 95 ~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~-~~~~~~~ 171 (352)
.-.|++.+++.+. .++++++++..+||+|.. ++.+.+++|.++|++| |+++|+||++.++.+.+..... ...+.
T Consensus 152 ~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~-g~llI~DEv~tg~gr~g~~~~~~~~~~~-- 228 (382)
T PLN00144 152 EYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEA-GALLVFDEVQCGLGRTGYLWAHEAYGVE-- 228 (382)
T ss_pred CCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchHhhhhhcCCC--
Confidence 0027899998885 467777776668885543 3455699999999999 9999999999998777652221 22332
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 251 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (352)
++ +.+++|.++ +|+|+|++++++++++.+.......+++.|++.+.++.+.++.-. ..+..+.+.+.-+..++.
T Consensus 229 PD----i~t~sK~l~-~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~-~~~~~~~~~~~g~~l~~~ 302 (382)
T PLN00144 229 PD----IMTLAKPLA-GGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKIS-KPGFLASVAKKGEYLREL 302 (382)
T ss_pred CC----EEEeccccc-CCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHH
Confidence 22 888999998 899999999999999888655566678899999999997765421 122223333333333444
Q ss_pred HHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CH
Q 018665 252 LVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SL 329 (352)
Q Consensus 252 l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~ 329 (352)
+.+.+.+.|.+.-+.. .|+++|+++.. ....+.+.+.++ ||.+.|+. ..+.+|++++. ++
T Consensus 303 l~~~~~~~~~~~~vrg-~G~~~~l~l~~-------------~~~~~~~~~~~~-Gv~i~~~~---~~~~lrl~p~~~~~~ 364 (382)
T PLN00144 303 LRRKLGGNPHVKEVRG-VGLLVGIQLDV-------------PAGPLVDACRDS-GLLVLTAG---KGDVVRLVPPLVISE 364 (382)
T ss_pred HHHHHhhCCCceeeec-CceEEEEEecC-------------ccHHHHHHHHHC-CeEEeecC---CCCEEEEeCCCccCH
Confidence 5555555544433333 78999999832 467788888865 99998863 25899999987 88
Q ss_pred HHHHHHHHHHHHHHhhh
Q 018665 330 TTLQAAVERIKKGLLTL 346 (352)
Q Consensus 330 ~~l~~~~~~l~~~~~~~ 346 (352)
+++++++++|.+++.++
T Consensus 365 ~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 365 AELEQAVEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999764
No 199
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.94 E-value=7e-24 Score=193.89 Aligned_cols=277 Identities=12% Similarity=0.167 Sum_probs=196.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChH-HHHHhcCCe------------EEEecccCCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYP-EMARIADAT------------PVILPTRISEN 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~-~~~~~~g~~------------v~~i~~~~~~~ 94 (352)
.+.+++++||++|++.+++.+. ...++|+..+..|++.. ..+...+.. +..++.
T Consensus 92 ~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 166 (397)
T TIGR03246 92 ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY----- 166 (397)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----
Confidence 4699999999999999998762 12356777777676654 343433321 112221
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
.|++.+++.+++++++|+++.+++++|... |.+.+++|.++|++| |+++|+||++.+++++|... ......
T Consensus 167 --~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~Gr~G~~~-a~~~~g---- 238 (397)
T TIGR03246 167 --NDLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRH-NALLIFDEVQTGVGRTGELY-AYMHYG---- 238 (397)
T ss_pred --CCHHHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcCCccccch-hhhhcC----
Confidence 378999999988888888887777778664 788999999999999 99999999998887666422 211111
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
....+.+++|.+| +|+++|++++++++++.+.......+++.+++.++++.++++.. + -+++.++++++.+++.
T Consensus 239 v~pDi~t~~K~lg-gG~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~----~-~~~l~~~~~~~~~~l~ 312 (397)
T TIGR03246 239 VTPDILTSAKALG-GGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLV----N-TPELLAGVKQRHDLFV 312 (397)
T ss_pred CCCCEEEeehhhh-CCcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHH----h-hccHHHHHHHHHHHHH
Confidence 1122458899998 89999999999999888865545556778999999998988751 1 2356677777888888
Q ss_pred HHhcccC---C-ceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--
Q 018665 254 KSFGELE---G-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-- 327 (352)
Q Consensus 254 ~~l~~~~---g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-- 327 (352)
+.|+++. + +..+. ..|.++.+.+.+... .....+++.|+++ |+.+.+. .++++|++++.
T Consensus 313 ~~L~~l~~~~~~~~~vr-g~G~~~~i~~~~~~~---------~~~~~~~~~l~~~-Gv~~~~~----g~~~lR~~p~~~~ 377 (397)
T TIGR03246 313 DGLEKINARYNVFSEIR-GKGLLIGAVLTEAYQ---------GKAKQFVNAAAEE-GVIALIA----GPNVVRFAPSLVI 377 (397)
T ss_pred HHHHHHHhcCCCeEeee-cCceEEEEEEcCchh---------hHHHHHHHHHHHC-CeEEeec----CCCEEEEeCCCCC
Confidence 8777651 1 22222 234545555532100 1467888888876 8888763 24789997666
Q ss_pred CHHHHHHHHHHHHHHHhhh
Q 018665 328 SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~~~~ 346 (352)
+++++++++++|+++++++
T Consensus 378 t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 378 SDDDIDEGLARFERAIEQV 396 (397)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998753
No 200
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.5e-23 Score=182.75 Aligned_cols=284 Identities=20% Similarity=0.215 Sum_probs=230.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEEecccCCCCcccCHHHHHhhccC--Cee
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTE--KSR 111 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--~~~ 111 (352)
.+-+++++++|.+++.++.++.++||+||+.....++.+ +.++.+|.+++.+..+ .+-.+|++++++++++ +.+
T Consensus 56 ~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~ 133 (383)
T COG0075 56 GDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIK 133 (383)
T ss_pred CcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCcc
Confidence 366788899999999999999999999999988877655 8999999999999987 4445899999999984 567
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccce
Q 018665 112 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 191 (352)
Q Consensus 112 ~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~ 191 (352)
+|.+++.-.+||...| +++|+++|++| |.++|||.+.+.. ..+... ++++.++++++..|.++ ...+
T Consensus 134 ~V~~vH~ETSTGvlnp---l~~I~~~~k~~-g~l~iVDaVsS~G----g~~~~v----d~wgiDv~itgSQK~l~-~PPG 200 (383)
T COG0075 134 AVAVVHNETSTGVLNP---LKEIAKAAKEH-GALLIVDAVSSLG----GEPLKV----DEWGIDVAITGSQKALG-APPG 200 (383)
T ss_pred EEEEEeccCcccccCc---HHHHHHHHHHc-CCEEEEEecccCC----Ccccch----hhcCccEEEecCchhcc-CCCc
Confidence 8888888889999999 99999999999 9999999997742 111221 23677799999999997 4457
Q ss_pred eEEEEcChhHHHHHHhhh------------------hccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 192 LGYIAGPKHFVAACNKIQ------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 192 ~g~l~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
+|++..+++..+.+.... ..+.++++.....++..+++.. ..+.++.+.++.+++.+.++
T Consensus 201 la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i--~~EGle~r~~RH~~~~~a~r 278 (383)
T COG0075 201 LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLI--LEEGLEARIARHRRLAEALR 278 (383)
T ss_pred cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHH
Confidence 899999988777654221 2445678888888899988873 35779999999999999999
Q ss_pred HHhcccCCceecC---CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--C
Q 018665 254 KSFGELEGVKMSE---PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 328 (352)
Q Consensus 254 ~~l~~~~g~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~ 328 (352)
+.++.+ |++.+. ..+.....+..|..+ +..++...+++++|+.+.+|........+||+... +
T Consensus 279 ~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~-----------~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~ 346 (383)
T COG0075 279 AGLEAL-GLELFADPERRSPTVTAIKVPEGV-----------DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVR 346 (383)
T ss_pred HHHHHc-CCccccCcccCCCceEEEECCCCC-----------CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCC
Confidence 999998 888875 224455677888764 55555558888899999888776667899998766 8
Q ss_pred HHHHHHHHHHHHHHHhhhCC
Q 018665 329 LTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 329 ~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+++..++..|+.++++++.
T Consensus 347 ~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 347 PEDVLAALAALEAALRELGV 366 (383)
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999998865
No 201
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.94 E-value=8.9e-24 Score=192.36 Aligned_cols=219 Identities=13% Similarity=0.178 Sum_probs=169.2
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCCh----HHHHHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY----PEMARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~----~~~~~~~g~ 82 (352)
.+...+++ +.+|++.+ .++.+++++++.++..++.+++++||+|+++...|.+. ...++..|.
T Consensus 69 ~p~~~~le------~~lA~l~g-------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 69 NPTVSMFE------ERLRLIEG-------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred CchHHHHH------HHHHHHhC-------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 34455666 99999984 55888999999999999999999999999988666443 456778899
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++. .|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++|+.....
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~-g~~vivD~a~a~~~~~---- 200 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAA-GAKVVLDNVFATPLLQ---- 200 (403)
T ss_pred EEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCCccccC----
Confidence 9999974 2889999999989999999999999999999 99999999999 9999999998753221
Q ss_pred cccccCCCCCCceEEEecccccccccccee-EEEEcChhHHH-HHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
.++ ..+.++++.|++|.++..|.++ |+++++++.+. .++......+..++++.+..+.+.++. +..
T Consensus 201 ~~~-----~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t-------l~~ 268 (403)
T PRK07810 201 RGL-----PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLET-------LAL 268 (403)
T ss_pred Chh-----hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc-------HHH
Confidence 111 1244589999999997567665 78888877655 455444445556788777776666654 556
Q ss_pred HHHHHHHHHHHHHHHhcccCCceec
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMS 265 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~ 265 (352)
+.++..++...+.+.|++.|.+..+
T Consensus 269 R~~~~~~~a~~~a~~L~~~p~v~~V 293 (403)
T PRK07810 269 RVRHSNASALRIAEFLEGHPAVRWV 293 (403)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccEE
Confidence 6666777777888888887776543
No 202
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.93 E-value=5.4e-24 Score=195.62 Aligned_cols=285 Identities=18% Similarity=0.161 Sum_probs=193.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC----------CCCEEEecCCCCCChHHH-HHhcCCeEE---EecccCC--CCcccCH
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS----------PGDEVIIPAPFWVSYPEM-ARIADATPV---ILPTRIS--ENFLLDP 99 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~----------~~~~vl~~~~~~~~~~~~-~~~~g~~v~---~i~~~~~--~~~~~d~ 99 (352)
.+.+++++||++|++.+++.+.. .+++|++.+..|++.... +...+-... ..+.... .-...|+
T Consensus 88 ~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 167 (400)
T PTZ00125 88 YDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDV 167 (400)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCH
Confidence 46899999999999999987631 346788888777766533 322221100 0010000 0001389
Q ss_pred HHHHhhcc-CCeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEE
Q 018665 100 KVLESKLT-EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 177 (352)
Q Consensus 100 ~~l~~~l~-~~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 177 (352)
+++++.++ +++++|+++.++||+|...| .+++++|.++|++| |+++|+||++.++.++|... ... .....++
T Consensus 168 ~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~Dev~~g~g~~G~~~-~~~-~~~~~pd--- 241 (400)
T PTZ00125 168 EALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKY-NVLLIVDEIQTGLGRTGKLL-AHD-HEGVKPD--- 241 (400)
T ss_pred HHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchhh-HHH-hcCCCCC---
Confidence 99999986 67889999888999999886 55699999999999 99999999998876665421 111 1111112
Q ss_pred Eecccccccccc-ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHh
Q 018665 178 VNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 256 (352)
Q Consensus 178 ~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 256 (352)
+.+++|.++ +| +|+|++++++++++.+.......+++.+++.+.++.++++... . ..+.++.+++.+.+++.|
T Consensus 242 ~~~~sK~l~-~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~--~---~~~~~~~~~~~~~l~~~l 315 (400)
T PTZ00125 242 IVLLGKALS-GGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLK--E---EKLAENAQRLGEVFRDGL 315 (400)
T ss_pred EEEEccccc-CCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHH
Confidence 335789998 55 5999999999999988655445566788889888888776411 1 123344444555555555
Q ss_pred ccc----CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHH
Q 018665 257 GEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLT 330 (352)
Q Consensus 257 ~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~ 330 (352)
+++ +.+....+ .|.++++.++.... .+..++++.|.++ ||.+.|+ ..+++|++++. +++
T Consensus 316 ~~l~~~~~~~~~~~~-~g~~~~v~~~~~~~---------~~~~~~~~~l~~~-Gv~v~~~----~~~~lRi~~~~~~~~~ 380 (400)
T PTZ00125 316 KELLKKSPWVKEIRG-KGLLNAIVFDHSDG---------VNAWDLCLKLKEN-GLLAKPT----HDNIIRFAPPLVITKE 380 (400)
T ss_pred HHHHhcCCCeEEEec-ccEEEEEEEccCcc---------hHHHHHHHHHHHC-CeEEeec----CCCEEEEECCccCCHH
Confidence 442 33333333 56667777753100 1567888998865 9999885 36799999764 999
Q ss_pred HHHHHHHHHHHHHhhhC
Q 018665 331 TLQAAVERIKKGLLTLR 347 (352)
Q Consensus 331 ~l~~~~~~l~~~~~~~~ 347 (352)
++++++++|++++.++.
T Consensus 381 ~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 381 QLDQALEIIKKVLKSFD 397 (400)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 203
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.2e-23 Score=189.30 Aligned_cols=218 Identities=12% Similarity=0.106 Sum_probs=161.6
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH----hcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~----~~g 81 (352)
+.+...+++ +++|++.+ ... .++++++++|+..++.+++++||+|+++.|+|......+. ..|
T Consensus 59 ~~p~~~~Le------~~lA~~~g------~~~-~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~g 125 (388)
T PRK07811 59 GNPTRTALE------EQLAALEG------GAY-GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWG 125 (388)
T ss_pred CCccHHHHH------HHHHHHhC------CCc-eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCC
Confidence 445667778 99999986 233 3455677899999999999999999999999986654433 368
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+++..++. .|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++++....
T Consensus 126 i~~~~~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~-gi~lIvD~a~a~~~~---- 190 (388)
T PRK07811 126 VEYTPVDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDA-GAKVVVDNTFASPYL---- 190 (388)
T ss_pred eEEEEeCC-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHc-CCEEEEECCCCcccc----
Confidence 88877764 3899999999889999999999999999988 99999999999 999999999875321
Q ss_pred ccccccCCCCCCceEEEecccccccccc-ceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..++. .+..+++.|++|.++.+| .+.|+++++ +++.+.+...........+++....+...++ .+.
T Consensus 191 ~~p~~-----~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~-------tl~ 258 (388)
T PRK07811 191 QQPLA-----LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK-------TLA 258 (388)
T ss_pred CCchh-----hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC-------cHH
Confidence 11211 233499999999997443 467988875 5666666655444444455554443333333 355
Q ss_pred HHHHHHHHHHHHHHHHhcccCCce
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.+.++.+++...+.+.|++.|++.
T Consensus 259 ~R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 259 VRMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCee
Confidence 556667778888899998887764
No 204
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.5e-23 Score=188.52 Aligned_cols=215 Identities=12% Similarity=0.104 Sum_probs=162.9
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH---HhcCCeE
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATP 84 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~---~~~g~~v 84 (352)
+...+++ +.+|++++ .+++++++|+++|+..++.+++++||+|+++.+.|.++...+ +..|.++
T Consensus 53 p~~~~lE------~~lA~l~g-------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v 119 (385)
T PRK08574 53 PTLRPLE------EALAKLEG-------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKV 119 (385)
T ss_pred ccHHHHH------HHHHHHhC-------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEE
Confidence 4455666 99999985 467788899999999999999999999999999999987666 4567777
Q ss_pred EEecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 85 VILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 85 ~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
..++ .|++++++++++ ++++|++++|+||+|.++| +++|+++|+++ |+++|+|++++... ...
T Consensus 120 ~~~~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~-gi~livD~t~a~~~----~~~ 183 (385)
T PRK08574 120 VLAY--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKEL-GAILVVDNTFATPL----LYR 183 (385)
T ss_pred EEEC--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCCccc----cCC
Confidence 6653 367899999987 8999999999999999999 88999999999 99999999986321 111
Q ss_pred ccccCCCCCCceEEEeccccccccccce-eEEEE-cChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWR-LGYIA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~-~g~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
++ ..+.++++.|++|.++.+|-. .|+++ .++++.++++......+...+++....+.+.++. +..+
T Consensus 184 ~l-----~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-------L~~R 251 (385)
T PRK08574 184 PL-----RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-------LEVR 251 (385)
T ss_pred hh-----hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-------HHHH
Confidence 11 134569999999999645544 46455 4677888877666655656666655544444443 4455
Q ss_pred HHHHHHHHHHHHHHhcccCCce
Q 018665 242 VKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.++..++...+.+.|++.|.+.
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 252 FERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHcCCCcC
Confidence 5666667888888888776654
No 205
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=1e-23 Score=191.15 Aligned_cols=283 Identities=17% Similarity=0.140 Sum_probs=203.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--------------CCCCEEEecCCCCCChHHHHHhc----CC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--------------SPGDEVIIPAPFWVSYPEMARIA----DA 82 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--------------~~~~~vl~~~~~~~~~~~~~~~~----g~ 82 (352)
+.+|+++ ..+..++.++|..|+..++.++. ++++.|+...-+|.+....++.. +.
T Consensus 154 ~~LA~f~-------g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a 226 (476)
T PLN02955 154 SSLADLK-------KKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNV 226 (476)
T ss_pred HHHHHHH-------CCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCc
Confidence 9999998 47788888888898888888762 45567888888999999888766 57
Q ss_pred eEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
++..++. + |++.|+++++ ++.+.|++....++.|.+.| +++|.++|++| |+++|+||+|+.+.+..
T Consensus 227 ~~~~f~H----N---D~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~-ga~LiVDEAH~~Gv~G~ 295 (476)
T PLN02955 227 EVFVYRH----C---DMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKY-GFLLVIDDAHGTFVCGE 295 (476)
T ss_pred eEEEeCC----C---CHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CcEEEEcccccCceecC
Confidence 7777763 2 7888888774 34566677777899999999 99999999999 99999999999766644
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccc--cCCChHHHHHHHHHhcccCCChHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT--SGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
........+....+.+++++|++|++|..| |++++++++++.+......+. .+.++....++.++++.. ..
T Consensus 296 ~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~----~~ 368 (476)
T PLN02955 296 NGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVA----RK 368 (476)
T ss_pred CCCcHHHHhCCCCCCcEEEEeCccchhccC---ceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHH----hc
Confidence 333333333223467799999999997565 999999999888876544333 334444555555565541 11
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
....++++.++.+++++.+ |+.+ .+.++.+.+.+.. .+..+.++|.++ ||.+.+.....-
T Consensus 369 ~~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~~~-----------~a~~~~~~L~~~-Gi~v~~i~yPtV 428 (476)
T PLN02955 369 EKWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGNQE-----------KALKASRYLLKS-GFHVMAIRPPTV 428 (476)
T ss_pred CHHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCCHH-----------HHHHHHHHHHHC-CCEEEEECCCCC
Confidence 2345667777777777742 4433 2444555554431 567889999976 999877654433
Q ss_pred C---CeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 318 D---TCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 ~---~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+ ..+||++.. +++||+++++.|.++......
T Consensus 429 P~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~ 464 (476)
T PLN02955 429 PPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNT 464 (476)
T ss_pred CCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 3 369999977 999999999999998766544
No 206
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=2.4e-23 Score=187.78 Aligned_cols=215 Identities=18% Similarity=0.146 Sum_probs=163.3
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g 81 (352)
+++...+++ +++|++. .++.++++++++++..++.+++++||+|+++.|.|..+...+ +..|
T Consensus 49 ~~p~~~~Le------~~lA~l~--------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 49 SNPTWRALE------AALGELE--------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred CCccHHHHH------HHHHHHc--------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 567778888 9999985 345666777788999999999999999999999998887644 4579
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
++++.++..+. .+ .+.+++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++|... .+.
T Consensus 115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~-g~~lvVD~t~~~~--~~~- 177 (366)
T PRK07582 115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAA-GALLVVDNTTATP--LGQ- 177 (366)
T ss_pred EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHc-CCEEEEECCCCCc--ccc-
Confidence 99999986421 11 22358899999999999999988 99999999999 9999999998531 121
Q ss_pred ccccccCCCCCCceEEEecccccc-ccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
.++ . .+.++++.|++|.+ |.+|.++||+++ ++++++.+.......+..++++....+...+.. +.
T Consensus 178 -~p~-~----~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t-------l~ 244 (366)
T PRK07582 178 -RPL-E----LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT-------LG 244 (366)
T ss_pred -Cch-h----cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc-------HH
Confidence 121 1 23348999999999 445789999997 477888887776666667777777766666654 44
Q ss_pred HHHHHHHHHHHHHHHHhcccCCcee
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKM 264 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~ 264 (352)
.+.++..++...+.+.|++.|.+..
T Consensus 245 ~R~~~~~~na~~la~~L~~~p~v~~ 269 (366)
T PRK07582 245 LRFARQCANALAVAELLAGHPAVRG 269 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccE
Confidence 4456667788888888988776643
No 207
>PRK05968 hypothetical protein; Provisional
Probab=99.93 E-value=1.5e-23 Score=190.50 Aligned_cols=277 Identities=14% Similarity=0.128 Sum_probs=196.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++++ .+..+++++++.|+..++.+++++||+|+++.+.|.+.. ..++..|++++.++..
T Consensus 70 ~~lA~l~g-------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~------ 136 (389)
T PRK05968 70 EMLAKLEG-------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR------ 136 (389)
T ss_pred HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC------
Confidence 99999986 234455677788999999999999999999999998754 4566789999998742
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|++++++.+ +++++|++++|+|+++...+ +++|+++|+++ |+++|+|++++...+. .++. .+.++
T Consensus 137 -d~~~l~~~i-~~tklV~ie~pt~~~~~~~d---l~~i~~la~~~-gi~vivD~a~a~~~~~----~p~~-----~g~Di 201 (389)
T PRK05968 137 -DEEAVAKAL-PGAKLLYLESPTSWVFELQD---VAALAALAKRH-GVVTMIDNSWASPVFQ----RPIT-----LGVDL 201 (389)
T ss_pred -CHHHHHHhc-ccCCEEEEECCCCCCCcHHH---HHHHHHHHHHc-CCEEEEECCCcchhcc----Cchh-----cCCcE
Confidence 789999988 57899999988887766655 99999999999 9999999998753221 1111 23358
Q ss_pred EEecccccccccc-ceeEEEEcChhHHHHHHhhhh-ccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 177 ~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
++.|++|.++.+| .+.|+++.+++++++++.... ......+++....+...++. +..+.++..++...+.+
T Consensus 202 vv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t-------l~~r~~~~~~~a~~la~ 274 (389)
T PRK05968 202 VIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT-------LPLRMKAHEASALEIAR 274 (389)
T ss_pred EEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc-------HHHHHHHHHHHHHHHHH
Confidence 8999999997544 578999999998888776433 23345666666665555543 45556666667888889
Q ss_pred HhcccCCceecC-C-----------CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC------
Q 018665 255 SFGELEGVKMSE-P-----------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG------ 316 (352)
Q Consensus 255 ~l~~~~g~~~~~-~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~------ 316 (352)
.|++.|++..+. | ..|.++.+++.+. .+..++.+.|.. .++.+..|+.+.
T Consensus 275 ~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-----------~~~~~f~~~L~~-~~~~~s~G~~~slv~p~~ 342 (389)
T PRK05968 275 RLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-----------IDVRAFADALKL-FRLGVSWGGHESLVVPAE 342 (389)
T ss_pred HHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----------HHHHHHHHhCCc-cEEecCCCCCCceeeeCc
Confidence 999888875543 3 1133455666532 156778887764 366655555443
Q ss_pred -----------------CCCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 317 -----------------DDTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 317 -----------------~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
.++.+|+|++. |+.+.+++.|+.+++..
T Consensus 343 ~~~~~~~~~~~~~~~gi~~~liR~SvGl--E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 343 VVLQQKAQPNSAARFGVSPRSVRLHVGL--EGTEALWADLEQALAAA 387 (389)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHHh
Confidence 13689999999 24555566666665543
No 208
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=1.6e-23 Score=193.38 Aligned_cols=289 Identities=13% Similarity=0.046 Sum_probs=198.3
Q ss_pred HHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH-----HHHhcCCeEEEecccCCCCcc
Q 018665 22 QFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE-----MARIADATPVILPTRISENFL 96 (352)
Q Consensus 22 ~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~-----~~~~~g~~v~~i~~~~~~~~~ 96 (352)
.++++++ .+..+|++++ +++++..++.+++++||+|+++.|+|.++.. .+...|.+++.++++. .++.
T Consensus 79 ~la~~~g-----~~~~~i~~~s-gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~ 151 (416)
T PRK00011 79 RAKELFG-----AEYANVQPHS-GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGL 151 (416)
T ss_pred HHHHHhC-----CCceeeecCC-chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCC
Confidence 5666665 4455566554 5789999999999999999999999976532 2234567888888763 3467
Q ss_pred cCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc-cccCCCCccccccCCCCCCc
Q 018665 97 LDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 97 ~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~-~~~~~~~~~~~~~~~~~~~~ 174 (352)
+|++++++.+++ ++++++++++++ |...| +++|.++|+++ |+++|+|++|+. ..+.+..+..+. ..
T Consensus 152 ~d~~~l~~~i~~~~~k~v~~~~~~~--~~~~~---~~~I~~la~~~-~~~livD~a~~~g~~~~g~~~~~~~------~~ 219 (416)
T PRK00011 152 IDYDEVEKLALEHKPKLIIAGASAY--SRPID---FKRFREIADEV-GAYLMVDMAHIAGLVAAGVHPSPVP------HA 219 (416)
T ss_pred cCHHHHHHHHHhcCCCEEEECCCcC--CCccC---HHHHHHHHHHc-CCEEEEECcchhcccccCccCCCCC------CC
Confidence 999999999964 788888876554 45567 89999999999 999999999863 222221111111 23
Q ss_pred eEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhccccC-CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+++++|++|++ +|.+.|+++++ +++++.+......+..+ +....+.++..++... ..+++++..++++++++.+
T Consensus 220 di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~l 295 (416)
T PRK00011 220 DVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEA--LEPEFKEYAQQVVKNAKAL 295 (416)
T ss_pred cEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHH
Confidence 48899999987 56788999985 68888887655433322 2222333322333220 1345678888999999999
Q ss_pred HHHhcccCCceecC-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC------CCCCCeEEEEe
Q 018665 253 VKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA------FGDDTCIRISY 325 (352)
Q Consensus 253 ~~~l~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~------~~~~~~iRi~~ 325 (352)
.+.|++. |+++.. ...++++|+.+++.. .+..++.+.|.++ ||.+..+.. ...+..+|++.
T Consensus 296 ~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~L~~~-GI~v~~~~~p~~~~~~~~~~~~Ri~~ 363 (416)
T PRK00011 296 AEALAER-GFRVVSGGTDNHLVLVDLRSKG----------LTGKEAEAALEEA-NITVNKNAVPFDPRSPFVTSGIRIGT 363 (416)
T ss_pred HHHHHhC-CCeeeecCCCCeEEEEeCcccC----------CCHHHHHHHHHHc-CcEEccCcCCCCCCCCCCCCceEecC
Confidence 9999987 777653 233477888875320 1466788877654 999874321 11245799964
Q ss_pred ------ecCHHHHHHHHHHHHHHHhh
Q 018665 326 ------AASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 326 ------~~~~~~l~~~~~~l~~~~~~ 345 (352)
..+++|++++++.|++++..
T Consensus 364 ~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 364 PAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred HHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 23689999999999998765
No 209
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.93 E-value=2.6e-23 Score=188.20 Aligned_cols=278 Identities=14% Similarity=0.133 Sum_probs=194.6
Q ss_pred hHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCCeEEEecccCCCCc
Q 018665 20 VQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENF 95 (352)
Q Consensus 20 ~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~~v~~i~~~~~~~~ 95 (352)
++.++++++ .+++++++++++++..++. ++++||+|+++.+.|.++... ++..|++++.++..
T Consensus 53 e~~la~l~g-------~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~----- 119 (378)
T TIGR01329 53 ESLLAKLDK-------ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT----- 119 (378)
T ss_pred HHHHHHHhC-------CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC-----
Confidence 388888875 3677777888889987765 779999999999999887653 45689999999862
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|+++... ....++ . .+-+
T Consensus 120 --d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~-g~~vivD~a~~~~----~~~~~l-~----~g~D 184 (378)
T TIGR01329 120 --DLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQ-NALVVVDNTMMSP----LLCNPL-E----LGAD 184 (378)
T ss_pred --CHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHc-CCEEEEECCCccc----ccCChh-h----cCCc
Confidence 789999999989999999999999999999 99999999999 9999999997531 111222 1 2335
Q ss_pred EEEeccccccccc-cceeEEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMT-GWRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 176 i~~~s~sK~~g~~-g~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
+++.|.+|.++.+ +...|++++++ .+.+++.......+...+++....+...+ +.+..+.++..++...+.
T Consensus 185 i~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l-------~tl~~R~e~~~~na~~la 257 (378)
T TIGR01329 185 IVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGI-------KTLAIRIEKQQENARAIA 257 (378)
T ss_pred EEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccC-------CCHHHHHHHHHHHHHHHH
Confidence 9999999998533 45689998754 55576766555445556665543333333 335555566666777777
Q ss_pred HHhcccCCceec-CC----------------CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 254 KSFGELEGVKMS-EP----------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 254 ~~l~~~~g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
+.|++.|.+..+ .| ..|.++.+++.+. ..+.++.+.|. ..++.+..|+...
T Consensus 258 ~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~-----------~~~~~~~~~L~-~~~i~~s~G~~~s 325 (378)
T TIGR01329 258 MFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSV-----------ALSKRLVEATK-LFSITVSFGSVNS 325 (378)
T ss_pred HHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCH-----------HHHHHHHHhCc-CcccccCCCCCCc
Confidence 777766544211 11 1234466666321 13678888874 4577776665432
Q ss_pred C-----------------------CCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 317 D-----------------------DTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 317 ~-----------------------~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
. ++.+|+|++. |+.+.+++.|+.+++..
T Consensus 326 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 326 LISMPCFMSHASIPAEVREERGLPEDLVRLSVGI--EDVDDLISDLDIAFVTA 376 (378)
T ss_pred eeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHhc
Confidence 1 3589999999 35666777777777643
No 210
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=1.5e-23 Score=190.47 Aligned_cols=217 Identities=14% Similarity=0.118 Sum_probs=164.2
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~ 82 (352)
++...+++ +.++++.+ .+++++++|+++|+..++.+++++||+|+++.|+|..+.. .++..|+
T Consensus 64 ~pt~~~Le------~~lA~l~g-------~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 64 TPTSLALA------QRLAEIEG-------GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred CHHHHHHH------HHHHHHhC-------CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 44455666 99999874 5789999999999999999999999999999999998774 4567899
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
++..++.. +.+.+++++++++++|++++|+||+|...+ +++|+++|+++ |+++|+|++|.....
T Consensus 131 ~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~~d---i~~I~~ia~~~-gi~livD~a~a~~~~----- 194 (394)
T PRK07050 131 TVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEVPD---VPAITAAARAR-GVVTAIDNTYSAGLA----- 194 (394)
T ss_pred EEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccHhh---HHHHHHHHHHc-CCEEEEECCcccccc-----
Confidence 99988642 447788889889999999999999987776 99999999999 999999999865211
Q ss_pred cccccCCCCCCceEEEeccccccc-cccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
+..+ ..+.++++.|++|.++ ..+...|++++ +++++++++......+.+.+++....+...+++ +..
T Consensus 195 --~~~l--~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t-------l~~ 263 (394)
T PRK07050 195 --FKPF--EHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPS-------LQV 263 (394)
T ss_pred --cCHH--HcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc-------HHH
Confidence 1111 1244699999999995 23345787775 677888887766655666777665544443332 344
Q ss_pred HHHHHHHHHHHHHHHhcccCCce
Q 018665 241 MVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
+.++..++...+.+.|++.|.+.
T Consensus 264 Rl~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 264 RLAAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcc
Confidence 55566666777888888776543
No 211
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.93 E-value=4.3e-23 Score=189.48 Aligned_cols=291 Identities=13% Similarity=0.129 Sum_probs=194.6
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHH-HHHhcCC-------------eEEEecccCCCCc---cc
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPE-MARIADA-------------TPVILPTRISENF---LL 97 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~-~~~~~g~-------------~v~~i~~~~~~~~---~~ 97 (352)
+.+++++|+++|++.+++... ....+|+.....|++... .+...+. .+..+|.+.+... .-
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~ 181 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQD 181 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHH
Confidence 689999999999999998753 233578888888887653 2222121 1333444321110 01
Q ss_pred CHHHHHhhcc-----CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 98 DPKVLESKLT-----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 98 d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
+++.+++.++ +++++++++..++++|..+ |.+++++|.++|+++ |+++|+||++.++.+.|.. ..+......
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~G~~-~a~~~~~~~ 259 (421)
T PRK09792 182 SLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH-GIVMIADEVQSGFARTGKL-FAMDHYADK 259 (421)
T ss_pred HHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCCch-hHHHhcCCC
Confidence 3477777764 3567888877799999765 889999999999999 9999999999998877642 333333222
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 251 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (352)
++ +.+++|.++ +|+|+|++++++++++.+.......+++.|++.++++.+.++.-.. .+.++++++.-++.++.
T Consensus 260 pD----i~t~gK~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~-~~~~~~~~~~g~~l~~~ 333 (421)
T PRK09792 260 PD----LMTMAKSLA-GGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK-ESLCERANQLGQRLKNT 333 (421)
T ss_pred Cc----EEEeehhhc-CCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHH
Confidence 22 688999998 8999999999999988876555566788999999977777764211 23333333222222233
Q ss_pred HHHHhcccCCceecCCCC-ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--C
Q 018665 252 LVKSFGELEGVKMSEPQG-AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 328 (352)
Q Consensus 252 l~~~l~~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~ 328 (352)
+.+..++.|. +...++ |.++++++++....... ......+.+.+.++ |+.+.+.+. ..+.+|+.++. +
T Consensus 334 l~~l~~~~p~--v~~vrG~Gl~~~ie~~~~~~~~~~----~~~~~~l~~~~~~~-Gv~i~~~g~--~~~~irl~P~l~i~ 404 (421)
T PRK09792 334 LIDAKESVPA--IAAVRGLGSMIAAEFNDPQTGEPS----AAIAQKIQQRALAQ-GLLLLTCGA--YGNVIRFLYPLTIP 404 (421)
T ss_pred HHHHHHhCCC--cceecccceEEEEEecCCccCCcc----hHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEeCCCcCC
Confidence 3222233433 234455 88899998753110000 01356788888876 898864221 25789999887 8
Q ss_pred HHHHHHHHHHHHHHHh
Q 018665 329 LTTLQAAVERIKKGLL 344 (352)
Q Consensus 329 ~~~l~~~~~~l~~~~~ 344 (352)
++++++++++|.++++
T Consensus 405 ~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 405 DAQFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999885
No 212
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=1.6e-23 Score=192.52 Aligned_cols=274 Identities=14% Similarity=0.106 Sum_probs=194.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC---CEEEecCCCCCChHH----HHHhcCCeE----EEecccCCCCcccCHHHH
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPG---DEVIIPAPFWVSYPE----MARIADATP----VILPTRISENFLLDPKVL 102 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~---~~vl~~~~~~~~~~~----~~~~~g~~v----~~i~~~~~~~~~~d~~~l 102 (352)
.++++|++++|+|++++.++.++.+++ +.|++....|.+... .++..|.++ +.++.+ .++.+|++.+
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~--~~g~~~~~~l 161 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPR--EEETLRLEDI 161 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccC--CCCccCHHHH
Confidence 678899999999999999999876553 368888899988443 445678887 345443 3445788888
Q ss_pred Hhhc---cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEe
Q 018665 103 ESKL---TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179 (352)
Q Consensus 103 ~~~l---~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 179 (352)
++.+ ++++++|++++++|.+|..+| +++|.++|+++ |+++++|++++. |..+..+.. .+.+++++
T Consensus 162 ~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~-g~~~~vD~aq~~----G~~~id~~~----~gvD~~~~ 229 (406)
T TIGR01814 162 LDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAK-GALVGFDLAHAV----GNVPLDLHD----WGVDFACW 229 (406)
T ss_pred HHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHc-CCEEEEEccccc----CCccccccc----CCCCEEEE
Confidence 8877 368999999999999999999 99999999999 999999999986 333333322 34569999
Q ss_pred ccccccccccceeEEEEcChhHHHHHHhh-h----------------------hccccCCChHHHHHHHHHhcccCCChH
Q 018665 180 GFSKAFAMTGWRLGYIAGPKHFVAACNKI-Q----------------------SQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 180 s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
|.+|+++ +|.+ |.++..++....+... . .....+++.....++.++++.. ...
T Consensus 230 s~hK~l~-g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~--~~~ 305 (406)
T TIGR01814 230 CTYKYLN-AGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIF--DQA 305 (406)
T ss_pred cCccccC-CCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHH--Hhc
Confidence 9999984 2334 4444433333222110 0 0112346777777777777652 123
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc----CCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 237 VVSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
..+++.++.+++.+++.+.|+++ ++++++.+. .+..+.+.++ . ++.++.+.|.++ ||.
T Consensus 306 g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~------------~~~~~~~~L~~~-gi~ 371 (406)
T TIGR01814 306 GMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V------------PGKAVFQALIKR-GVI 371 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C------------CHHHHHHHHHHC-CEE
Confidence 46777888888888898888764 357776542 1334556665 2 677899998865 898
Q ss_pred eccCCCCCCCCeEEEEe-ec--CHHHHHHHHHHHHHHH
Q 018665 309 LVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 309 i~~g~~~~~~~~iRi~~-~~--~~~~l~~~~~~l~~~~ 343 (352)
+... .++.+|+|+ +. +++|++++++.|++++
T Consensus 372 v~~~----~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 372 GDKR----EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred Eecc----CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 7532 357999998 43 8999999999999865
No 213
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.93 E-value=2.5e-23 Score=191.33 Aligned_cols=292 Identities=12% Similarity=0.044 Sum_probs=190.8
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-cC--------C-----eEEEecccCCCC------
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD--------A-----TPVILPTRISEN------ 94 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~g--------~-----~v~~i~~~~~~~------ 94 (352)
+.++++++|++|++.+++... ....+|+....+|++....+.. .+ . .+..++.+....
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 689999999999999998643 2335688888878776533222 11 1 122233321000
Q ss_pred ---cccCHHHHHhhc-----cCCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 95 ---FLLDPKVLESKL-----TEKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 95 ---~~~d~~~l~~~l-----~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
+.-+++.+++.+ .+++.+|++...+..+|..+ +.+.+++|.++|+++ |+++|+||++.++.+++. ..++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-gillI~DEV~tg~gr~g~-~~a~ 252 (420)
T TIGR00700 175 QLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH-GIVFIADEVQTGFARTGA-MFAC 252 (420)
T ss_pred chhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEecccCCcccch-hHHH
Confidence 001245666654 24677888877777788766 455699999999999 999999999999877664 2222
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 245 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (352)
.... ....+.++||.++ +|+|+|++++++++++.+.......+++.|++.++++.++++... .....+.+.+.-
T Consensus 253 ~~~~----~~pDi~~lsK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~g 326 (420)
T TIGR00700 253 EHEG----PEPDLITTAKSLA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIE-SEGLIERARQIG 326 (420)
T ss_pred hhcC----CCCCEEEeecccc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 2221 2233566999999 999999999999999888655566778899999999988876411 122233333333
Q ss_pred HHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEe
Q 018665 246 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325 (352)
Q Consensus 246 ~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~ 325 (352)
++.++.+.+..+++|.+..+.+. |.++++++.+....... ......+.+.+.++ ||.+.|++.| .+++|+++
T Consensus 327 ~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~----~~~~~~l~~~~~~~-Gv~i~p~~~f--~~~lRl~p 398 (420)
T TIGR00700 327 RLVTDRLTTLKAVDPRIGDVRGL-GAMIAVELVDPGTTEPD----AGLAERIATAAHAA-GLLLLTCGMF--GNIIRFLP 398 (420)
T ss_pred HHHHHHHHHHHhhCCCEEEeecc-ceEEEEEEecCCCCCcc----HHHHHHHHHHHHHC-CeEEeccCCC--CCEEEEEC
Confidence 33344444433444445455555 66677776321000000 00244566666655 9999998765 47999998
Q ss_pred ec--CHHHHHHHHHHHHHHHh
Q 018665 326 AA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 326 ~~--~~~~l~~~~~~l~~~~~ 344 (352)
+. +++++++++++|.+++.
T Consensus 399 ~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 399 PLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CCCcCHHHHHHHHHHHHHHhh
Confidence 75 89999999999999875
No 214
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.93 E-value=5.6e-23 Score=185.34 Aligned_cols=278 Identities=10% Similarity=0.076 Sum_probs=194.3
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++.+ .+++++++|+++|+..++.+++++||+|+++++.|.++... ++..|+++..++..
T Consensus 57 ~~lA~l~g-------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~------ 123 (377)
T TIGR01324 57 DAMCELEG-------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL------ 123 (377)
T ss_pred HHHHHHhC-------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC------
Confidence 99999874 57899999999999999999999999999999999877643 45678888877532
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
+.+.+++++++++++|++++|+||+|...+ +++|+++|+++ |+++|+|++|+... ...+ ...+.++
T Consensus 124 -~~e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~-g~~livD~t~a~g~----~~~p-----l~~gaDi 189 (377)
T TIGR01324 124 -IGEDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNP-GIVIMIDNTWAAGL----LFKP-----LEHGVDI 189 (377)
T ss_pred -CHHHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHc-CCEEEEECCCcccc----ccCc-----cccCceE
Confidence 237899999989999999999999999988 99999999999 99999999997521 1111 1245669
Q ss_pred EEeccccccccc-cceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMT-GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 255 (352)
Q Consensus 177 ~~~s~sK~~g~~-g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (352)
++.|.+|.+|.. +...|+++.+++.++.+......++...++.....+...++ .+..+.++..++...+.+.
T Consensus 190 vv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~-------tl~~R~~~~~~~a~~la~~ 262 (377)
T TIGR01324 190 SIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLR-------TLGVRLKQHQESSLAIAKW 262 (377)
T ss_pred EEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhh-------hHHHHHHHHHHHHHHHHHH
Confidence 999999999533 46688999998888877755555555667766655555554 3444455666676778888
Q ss_pred hcccCCce-ecCC----------------CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC--
Q 018665 256 FGELEGVK-MSEP----------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-- 316 (352)
Q Consensus 256 l~~~~g~~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-- 316 (352)
|++.|.+. ++.| ..|.++.+++.+.. .+...++.+.|.- .++.+.-|+...
T Consensus 263 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~---------~~~~~~~~~~l~~-~~~~~slG~~~sl~ 332 (377)
T TIGR01324 263 LSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT---------QKQVHAFLDHLQL-FGLGYSWGGYESLA 332 (377)
T ss_pred HHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC---------HHHHHHHHHhCCc-ceEeccCCCcccee
Confidence 87766542 2222 12444556664310 0134556665542 244433332110
Q ss_pred -----------------CCCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 317 -----------------DDTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 317 -----------------~~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
.++.+|+|++. |+.+.+++.|+.+++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~liR~svGl--E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 333 LCNQPELGHRPNIKRNLEGPLIRVHIGL--ENVDDLKADLKAGFE 375 (377)
T ss_pred ecCCCCCCHHHHHhccCCCCEEEEEeCC--CCHHHHHHHHHHHHh
Confidence 12579999999 345556666666654
No 215
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=8.9e-23 Score=184.56 Aligned_cols=290 Identities=17% Similarity=0.246 Sum_probs=203.7
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|+..+...+++ +.++++++ .+++++++|+++++..++.++ .++||+|+++.++|.++...++..|.
T Consensus 14 ~~~~~~~~~~~------~~la~~~~-------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~ 80 (352)
T cd00616 14 LTLGPKVREFE------KAFAEYLG-------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGA 80 (352)
T ss_pred ccCCHHHHHHH------HHHHHHhC-------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCC
Confidence 44455567777 99999985 357888899999999999998 58899999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++. .++.+|++.+++.++++++++++++ ++|...| +++|.++|+++ |+++|+|++++...... .
T Consensus 81 ~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~-~i~li~D~a~~~g~~~~--~ 150 (352)
T cd00616 81 TPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKRH-GLPVIEDAAQALGATYK--G 150 (352)
T ss_pred eEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHHc-CCeEEEECCCCCCCeEC--C
Confidence 999999864 3567899999999988899888754 6899988 88999999999 99999999997432111 0
Q ss_pred cccccCCCCCCceEEEeccc--cccccccceeEEEEcC-hhHHHHHHhhhhcc---------------ccCCChHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQF---------------TSGASSISQKAG 224 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 224 (352)
..+.. ...+.+.|++ |.++ .| +.|+++.+ +++.++++...... +..++.+.....
T Consensus 151 ~~~~~-----~~d~~~~S~~~~K~~~-~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 223 (352)
T cd00616 151 RKVGT-----FGDAGAFSFHPTKNLT-TG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIG 223 (352)
T ss_pred EEccc-----CcceeEEcCCCCCCCc-cc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHH
Confidence 11111 1136677765 9884 33 45777765 57777665432211 111222222222
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCC-----ceEEEeecCCccCCcccCCCCCCChHHHHH
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG-----AFYLFIDFSTYYGSEAEGFGKIENSESLCR 299 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
... .+.++...++.+++.+++.+.|++++|+++..+.. ...+.+.+++..+ .+..++.+
T Consensus 224 ~~~-------l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~ 287 (352)
T cd00616 224 LAQ-------LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAG---------ESRDELIE 287 (352)
T ss_pred HHH-------HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCC---------CCHHHHHH
Confidence 211 24456777778889999999999988888774332 2344455553100 17889999
Q ss_pred HHHHccCEEeccCCCCC----------------C-------CCeEEEEeec--CHHHHHHHHHHHH
Q 018665 300 YLLDKAQVALVPGDAFG----------------D-------DTCIRISYAA--SLTTLQAAVERIK 340 (352)
Q Consensus 300 ~l~~~~gi~i~~g~~~~----------------~-------~~~iRi~~~~--~~~~l~~~~~~l~ 340 (352)
.|.++ ||.+....... . ...+|++++. +++|++++++.|+
T Consensus 288 ~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 288 ALKEA-GIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHC-CCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 98876 88653211100 0 1579999997 9999999998874
No 216
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=7.2e-23 Score=185.06 Aligned_cols=280 Identities=20% Similarity=0.306 Sum_probs=190.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 99 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~ 99 (352)
+.+++++ ..+++++++|+++++..++.++ .++||+|+++.++|..+...+...|.+++.+++++ +++.+|+
T Consensus 38 ~~la~~~-------g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~ 109 (376)
T TIGR02379 38 TWLENRT-------GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRP-DTMNIDE 109 (376)
T ss_pred HHHHHHh-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCCCH
Confidence 5555554 4578999999999999998887 78999999999999999999999999999999985 4467999
Q ss_pred HHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCCCCccccccCCCCCCceEEE
Q 018665 100 KVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTV 178 (352)
Q Consensus 100 ~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~ 178 (352)
+++++++++++++|+ |+||+|...+ +++|.++|+++ |+++|+|++++.+. +.+....+ .. .+.+
T Consensus 110 ~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~-~i~vIeDaa~~~g~~~~~~~~g~---~~-----~~~~ 174 (376)
T TIGR02379 110 TLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKH-QLFVIEDAAQGVMSTYKGRALGS---IG-----HLGT 174 (376)
T ss_pred HHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHC-CCEEEEECccccCCccCCcccCC---CC-----CEEE
Confidence 999999998899886 6678999999 88999999999 99999999998754 33322111 11 1344
Q ss_pred ecc--ccccccccceeEEEEcC-hhHHHHHHhhhhcc---------------------ccCCChHHHHHHHHHhcccCCC
Q 018665 179 NGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF---------------------TSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 179 ~s~--sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
.|| +|.+. +|.+.|+++++ +++.++++...... ++.++.+..+.+...
T Consensus 175 fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~q------- 246 (376)
T TIGR02379 175 FSFHETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQ------- 246 (376)
T ss_pred EeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHH-------
Confidence 444 37776 66678887765 77888776553211 111222222222222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccC--C-ceecC-CCC---c-eEEEeecCCccCCcccCCCCCCChHHHHHHHHHccC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELE--G-VKMSE-PQG---A-FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 306 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~--g-~~~~~-~~~---g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 306 (352)
.+.+++..++-+++.++..+.|.+++ + +.... +.. . +++++.+++.. +.+++.+.|.++ |
T Consensus 247 L~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~r~~l~~~L~~~-g 314 (376)
T TIGR02379 247 LEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDED-----------DRNELIKYLKEQ-E 314 (376)
T ss_pred HHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcC-----------CHHHHHHHHHHC-C
Confidence 34455555555556666667766542 2 22211 111 1 23345555421 578999998876 8
Q ss_pred EEeccCCC----------CC--C----------CCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 307 VALVPGDA----------FG--D----------DTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 307 i~i~~g~~----------~~--~----------~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
|.+.+... +. . ...+.|.+.. +++++++.++.|++++
T Consensus 315 I~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 315 IMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 88763220 00 0 1246666665 8899999999998865
No 217
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=5.5e-23 Score=188.26 Aligned_cols=211 Identities=18% Similarity=0.231 Sum_probs=159.1
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccCCCC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISEN 94 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~~~ 94 (352)
|++.+|++.+ .+..++++|+++|+..++.+++++||+|+++.+.|.+.. ..++..|.+++.++.
T Consensus 69 Le~~lA~leg-------~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~----- 136 (431)
T PRK08248 69 FEKRIAALEG-------GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP----- 136 (431)
T ss_pred HHHHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-----
Confidence 3388888874 567889999999999999999999999999999987654 345678999999975
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++++. +....++ .++.
T Consensus 137 --~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~-gi~vIvD~t~a~----~~~~~pl-----~~ga 201 (431)
T PRK08248 137 --SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEH-GIPLIVDNTFAS----PYLLRPI-----EHGA 201 (431)
T ss_pred --CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEeCCCCc----cccCChh-----HcCC
Confidence 2789999999989999999999999999999 88999999999 999999999752 1111121 2466
Q ss_pred eEEEeccccccccccceeEEEEcC-hhHH-----------------------H----------HHHhhhhccccCCChHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGP-KHFV-----------------------A----------ACNKIQSQFTSGASSIS 220 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~-~~~~-----------------------~----------~~~~~~~~~~~~~~~~~ 220 (352)
++++.|++|.+|.+|.++|++++. .+.. + .........+...+++.
T Consensus 202 Divv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~ 281 (431)
T PRK08248 202 DIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFN 281 (431)
T ss_pred CEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHH
Confidence 799999999998888888887763 2110 1 11112222334455555
Q ss_pred HHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 018665 221 QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 221 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
...+...++ .+..+.++..++...+.+.|++.|++.
T Consensus 282 a~l~~rgl~-------tl~~R~~~~~~nA~~la~~L~~~p~v~ 317 (431)
T PRK08248 282 SFLLLQGLE-------TLHLRMERHSENALAVAKFLEEHEAVE 317 (431)
T ss_pred HHHHhcCcC-------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 554444443 356666777778888999999887764
No 218
>PRK07505 hypothetical protein; Provisional
Probab=99.92 E-value=4.2e-23 Score=189.50 Aligned_cols=284 Identities=13% Similarity=0.092 Sum_probs=182.9
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc----CCC-CEEEecCCCCCChH---HHHHhcCCeEEEecccCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC----SPG-DEVIIPAPFWVSYP---EMARIADATPVILPTRIS 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~~-~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~ 92 (352)
+.++++++ . +.++.++++++...++..+. .++ ..|++.+..|++.. ......+.+++.+|.
T Consensus 98 ~~la~~~~-------~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~--- 166 (402)
T PRK07505 98 EALSELFG-------A-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH--- 166 (402)
T ss_pred HHHHHHhC-------C-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC---
Confidence 77777763 2 55555566778887776542 212 34666665554432 122234567777764
Q ss_pred CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc-cccccCCC-
Q 018665 93 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPG- 170 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~-~~~~~~~~- 170 (352)
.|++.++++++++++++++++|+||+|.+.+ +++|.++|+++ ++++|+||+|+...+..... ........
T Consensus 167 ----~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~-~~~li~DEa~~~~~~g~~g~~~~~~~~~~~ 238 (402)
T PRK07505 167 ----NDLDALEDICKTNKTVAYVADGVYSMGGIAP---VKELLRLQEKY-GLFLYIDDAHGLSIYGKNGEGYVRSELDYR 238 (402)
T ss_pred ----CCHHHHHHHHhcCCCEEEEEecccccCCcCC---HHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHHHcCCC
Confidence 2789999988777789999999999999999 88999999999 99999999986433322111 11112222
Q ss_pred CCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhcccc--CCChHHHHHHHHHhcccCCChHHHHHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 247 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 247 (352)
.++++++++|+||.+|.+| |++++ ++++++.+......+++ ++++..+.++.++++.. ..+++.+..+.+++
T Consensus 239 ~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~--~~~~~~~~~~~l~~ 313 (402)
T PRK07505 239 LNERTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIH--LSEELDQLQQKLQN 313 (402)
T ss_pred CCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHH--hccCcHHHHHHHHH
Confidence 3577899999999998555 78764 77888888765554443 34556777777776621 12334444555555
Q ss_pred HHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC---CCeEEEE
Q 018665 248 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRIS 324 (352)
Q Consensus 248 ~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~---~~~iRi~ 324 (352)
+.+.+...+... ......++.++.++.. ..+.++.+.|.++ ||.+.++..+.. +.++|++
T Consensus 314 ~~~~~~~~~~~~-----~~g~~~~i~~~~~~~~-----------~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~lRi~ 376 (402)
T PRK07505 314 NIALFDSLIPTE-----QSGSFLPIRLIYIGDE-----------DTAIKAAKQLLDR-GFYTSPVFFPVVAKGRAGLRIM 376 (402)
T ss_pred HHHHHHHHHHhc-----CCCCCCCEEEEEeCCH-----------HHHHHHHHHHHHC-CCeEeeecCCCCCCCCceEEEe
Confidence 554443332211 0111222223333221 0467889998866 999988743322 2689999
Q ss_pred eec--CHHHHHHHHHHHHHHHhh
Q 018665 325 YAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 325 ~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
++. +++|++++++.|++++++
T Consensus 377 ~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 377 FRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred cCccCCHHHHHHHHHHHHHHHHh
Confidence 995 999999999999998864
No 219
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=2.5e-22 Score=182.54 Aligned_cols=207 Identities=12% Similarity=0.103 Sum_probs=153.2
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++++ ..+. +++++|+.++..++. ++++||+|+++.+.|.+.. ..++..|.+++.++..
T Consensus 61 ~~lA~l~g------~~~~-v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~------ 126 (390)
T PRK08064 61 DIIAELEG------GTKG-FAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT------ 126 (390)
T ss_pred HHHHHHhC------CCCe-EEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC------
Confidence 99999986 2344 455666788887776 7788999999999998544 4456789999999862
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|++.+++++++++++|++++|+||+|.+.+ +++|.++|+++ |+++|+|++|..... ..++ ..+.++
T Consensus 127 -d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~-g~~vvvD~a~~~~~~----~~~~-----~~g~Di 192 (390)
T PRK08064 127 -NLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAI-GCLTFVDNTFLTPLL----QKPL-----DLGADV 192 (390)
T ss_pred -CHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHc-CCEEEEECCCCcccc----cCch-----hhCCcE
Confidence 789999999889999999999999999999 89999999999 999999999865321 1111 134568
Q ss_pred EEeccccccc-cccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 177 ~~~s~sK~~g-~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
++.|++|.++ .+|.-.|++++ ++++++.++.....++...++.....+... .+.+..+.++..++...+.+
T Consensus 193 vv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~g-------l~tl~~R~~~~~~~a~~la~ 265 (390)
T PRK08064 193 VLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRG-------LKTLHVRLEHSSETANKIAL 265 (390)
T ss_pred EEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcc-------cCcHHHHHHHHHHHHHHHHH
Confidence 9999999985 23344677765 567888888777666655555555543322 23355556666777777888
Q ss_pred HhcccCCc
Q 018665 255 SFGELEGV 262 (352)
Q Consensus 255 ~l~~~~g~ 262 (352)
.|++.|.+
T Consensus 266 ~L~~~~~v 273 (390)
T PRK08064 266 YLQEHPKV 273 (390)
T ss_pred HHhcCCCc
Confidence 88776543
No 220
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.92 E-value=1.5e-22 Score=183.77 Aligned_cols=285 Identities=14% Similarity=0.104 Sum_probs=186.1
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
+++.+|++++ .++. ++.++++.++..+...+.++++.|++..-.|.+....++........++ . .|
T Consensus 61 ~e~~la~~~~------~~~~-l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~----~---~d 126 (370)
T PRK05937 61 LEHKIAHFHG------APEA-FIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR----H---ND 126 (370)
T ss_pred HHHHHHHHhC------CCeE-EEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec----C---CC
Confidence 3399999986 2333 4455555666666666667788888888888888887776543333332 1 48
Q ss_pred HHHHHhhcc------CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCC
Q 018665 99 PKVLESKLT------EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 172 (352)
Q Consensus 99 ~~~l~~~l~------~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
++.|++.++ +++++|++++++|++|.+.| +++|.++|+++ |+++++|++|+...+............. .
T Consensus 127 ~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~~-~ 201 (370)
T PRK05937 127 LDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP---LEQIIALSKKY-HAHLIVDEAHAMGIFGDDGKGFCHSLGY-E 201 (370)
T ss_pred HHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCchHHhhCC-C
Confidence 898888886 23556778999999999999 99999999999 9999999999853221111000011111 1
Q ss_pred CceEEEeccccccccccceeEEEEcChhHHHHHHhh--hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHH
Q 018665 173 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 250 (352)
Q Consensus 173 ~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
+..+++.|+||.+|..| +.++..++..+.+... ...++.+.+++...++.++++.. .+..+..+++++++++
T Consensus 202 ~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l---~~~~~~~~~~l~~l~~ 275 (370)
T PRK05937 202 NFYAVLVTYSKALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFL---SQEGELARKQLFRLKE 275 (370)
T ss_pred CCcEEEEechhhhhcCc---eEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHH
Confidence 22367899999998555 3345556665554422 22334456777776666666541 1112345667777888
Q ss_pred HHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--C
Q 018665 251 FLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 328 (352)
Q Consensus 251 ~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~ 328 (352)
++.+.|+.. +. +....+.++.. ....+.+.|.++ ||.+.... +...+++|++++. +
T Consensus 276 ~l~~~l~~~-~~-------~~~~~i~~~~~------------~~~~~~~~L~~~-gi~v~~~~-~~~~~~iRis~~~~~t 333 (370)
T PRK05937 276 YFAQKFSSA-AP-------GCVQPIFLPGI------------SEQELYSKLVET-GIRVGVVC-FPTGPFLRVNLHAFNT 333 (370)
T ss_pred HHHHhcCCC-CC-------CCEEEEEeCCh------------hHHHHHHHHHHC-CeeEEeeC-CCCCCEEEEEcCCCCC
Confidence 888877643 10 11112333432 556788887765 89886322 1124689999986 9
Q ss_pred HHHHHHHHHHHHHHHhhhCCCC
Q 018665 329 LTTLQAAVERIKKGLLTLRPGV 350 (352)
Q Consensus 329 ~~~l~~~~~~l~~~~~~~~~~~ 350 (352)
+||++++++.|+++++++..+.
T Consensus 334 ~edid~l~~~L~~~~~~~~~~~ 355 (370)
T PRK05937 334 EDEVDILVSVLATYLEKYQKNV 355 (370)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 9999999999999998886643
No 221
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=2e-22 Score=184.51 Aligned_cols=209 Identities=14% Similarity=0.148 Sum_probs=154.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh----cCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~----~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++.+ .+..++++++++|+..++.+++++||+|+++.+.|.+....+.. .|.++.+++.
T Consensus 65 ~~lA~l~g-------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~------- 130 (425)
T PRK06084 65 QRVAALEG-------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH------- 130 (425)
T ss_pred HHHHHHhC-------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-------
Confidence 99999974 44667889999999999999999999999999999876655543 5777766653
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.|++++++++++++++|++++|+||+|.+++ +++|.++|+++ |+++|+|++++... ...++ ..+.++
T Consensus 131 ~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~-~i~vVvD~a~a~~~----~~~p~-----~~gaDi 197 (425)
T PRK06084 131 DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRH-GVPLIVDNTVATPV----LCRPF-----EHGADI 197 (425)
T ss_pred CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcccc----cCChh-----hcCCCE
Confidence 3899999999889999999999999999999 89999999999 99999999987421 11111 134559
Q ss_pred EEeccccccccccceeEEEEcC-hhH--HHH----------------------------H----HhhhhccccCCChHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGP-KHF--VAA----------------------------C----NKIQSQFTSGASSISQ 221 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~-~~~--~~~----------------------------~----~~~~~~~~~~~~~~~~ 221 (352)
++.|++|.+|.+|.++|.+++. ..+ .+. . .......+...+++..
T Consensus 198 vv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a 277 (425)
T PRK06084 198 VVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNA 277 (425)
T ss_pred EEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 9999999998678887876653 221 000 0 0111223445566555
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
..+...++ .+..+.++..++...+.+.|++.|++.
T Consensus 278 ~l~lrgl~-------tl~~R~~~~~~na~~la~~L~~~p~v~ 312 (425)
T PRK06084 278 FLILQGLE-------TLALRMERHTENALKVARYLQQHPQVA 312 (425)
T ss_pred HHHHcCcC-------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 54444443 356666777778888899998887754
No 222
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.92 E-value=2.9e-22 Score=185.73 Aligned_cols=292 Identities=14% Similarity=0.147 Sum_probs=184.9
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-cC-------------CeEEEecccCCC--CcccC
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD-------------ATPVILPTRISE--NFLLD 98 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~g-------------~~v~~i~~~~~~--~~~~d 98 (352)
+.++++++|++|++.+++... ....+|+....+|++....+.. .+ ..+..+|.+... .....
T Consensus 116 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK06918 116 KKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLT 195 (451)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCc
Confidence 589999999999999998642 2345788888888776643322 11 112233332110 00010
Q ss_pred --------HHHHHhhc----c-CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 99 --------PKVLESKL----T-EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 99 --------~~~l~~~l----~-~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
++.+++.+ . +++.++++...+...|..+ |.+.+++|.++|+++ |+++|+||++.++.+.+. ..+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~-gillI~DEV~tg~gr~g~-~~a 273 (451)
T PRK06918 196 EEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH-GILFVADEIQTGFARTGK-YFA 273 (451)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCcCccCc-eeh
Confidence 22333332 2 3566666665566667655 556699999999999 999999999999887664 233
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
+..+...++ +.|+||.++ +|+|+||+++++++++.+.......+++.+++.+.++.++++... .+.+ .++
T Consensus 274 ~~~~~v~pD----i~t~sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~--~~~~---~~~ 343 (451)
T PRK06918 274 IEHFDVVPD----LITVSKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIE--KENL---NDR 343 (451)
T ss_pred hHhcCCCCC----EEeeehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHH--HCCH---HHH
Confidence 333322122 668999999 899999999999999888665566778899999999888876411 1112 222
Q ss_pred HHHHHHHHHHHhc----ccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCe
Q 018665 245 FRERRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 320 (352)
Q Consensus 245 ~~~~~~~l~~~l~----~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~ 320 (352)
.++..+.+.+.|+ +++.+..+.+.++++.|....+....... ......+.+.+.++ ||.+.|++.+ .++
T Consensus 344 ~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~-Gvlv~~~~~~--~~~ 416 (451)
T PRK06918 344 AIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPD----KTLTANICKEANKR-GLLLLSAGTY--GNV 416 (451)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCc----HHHHHHHHHHHHHC-CeEEeecCCC--CCE
Confidence 2333333333333 33333445566666554433111000000 00245666666665 9999997655 478
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 321 IRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 321 iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+|++++. +++++++++++|+++++++-
T Consensus 417 lrl~p~l~~t~~~id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 417 IRVLMPLVITDEQLEEGLTIIEESLQACY 445 (451)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 9999975 89999999999999998753
No 223
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.92 E-value=5.1e-22 Score=180.37 Aligned_cols=283 Identities=18% Similarity=0.293 Sum_probs=194.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 99 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~ 99 (352)
+.+++++ ..+++++++|+++|+..++.++ .++||+|+++.++|..+...+...|.+++.++++. +++.+|+
T Consensus 38 ~~la~~~-------g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~ 109 (375)
T PRK11706 38 QWLEQRF-------GSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRP-DTMNIDE 109 (375)
T ss_pred HHHHHHh-------CCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCH
Confidence 5555554 3478999999999998887765 68999999999999999999999999999999975 3467899
Q ss_pred HHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCCCCccccccCCCCCCceEEE
Q 018665 100 KVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTV 178 (352)
Q Consensus 100 ~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~ 178 (352)
+++++++++++++|+++ |++|...+ +++|.++|+++ |+++|+|++|+.+. +.+. ...... .+.+
T Consensus 110 ~~le~~i~~~tk~i~~~---~~~G~~~~---~~~i~~la~~~-~i~vIeD~a~a~g~~~~~~---~~g~~~-----~~~~ 174 (375)
T PRK11706 110 TLIEAAITPKTRAIVPV---HYAGVACE---MDTIMALAKKH-NLFVVEDAAQGVMSTYKGR---ALGTIG-----HIGC 174 (375)
T ss_pred HHHHHhcCCCCeEEEEe---CCCCCccC---HHHHHHHHHHc-CCEEEEECccccccccCCe---eeecCc-----CEEE
Confidence 99999998889988865 46898888 88999999999 99999999998754 2322 111111 2445
Q ss_pred eccc--cccccccceeEEEEcChhHHHHHHhhhhcc-----------------ccCCChHHHHHHHHH-hcccCCChHHH
Q 018665 179 NGFS--KAFAMTGWRLGYIAGPKHFVAACNKIQSQF-----------------TSGASSISQKAGVAA-LGLGYAGGEVV 238 (352)
Q Consensus 179 ~s~s--K~~g~~g~~~g~l~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~-l~~~~~~~~~~ 238 (352)
.|++ |.++ +|.+.++++.++++.++++...... ..+.|.......++. +.. .+.+
T Consensus 175 ~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~q----l~~l 249 (375)
T PRK11706 175 FSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQ----LEAA 249 (375)
T ss_pred EeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHH----HHHH
Confidence 5655 9997 6777778888888888766544210 112332212111111 111 3445
Q ss_pred HHHHHHHHHHHHHHHHHhcccC--C-ceec-CCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec
Q 018665 239 SKMVKAFRERRDFLVKSFGELE--G-VKMS-EPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 310 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~--g-~~~~-~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~ 310 (352)
++..++-+++.+.+.+.|.+++ + +... .+. ...++++.+++.. +.+++.+.|.++ ||.+.
T Consensus 250 ~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~r~~l~~~L~~~-gI~~~ 317 (375)
T PRK11706 250 DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLE-----------DRSALINFLKEA-GIMAV 317 (375)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcC-----------CHHHHHHHHHHC-CCCcc
Confidence 6666667777778888887765 2 3322 121 2334556665421 678999998876 88764
Q ss_pred cCC----C------CC-----C-------CCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 311 PGD----A------FG-----D-------DTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 311 ~g~----~------~~-----~-------~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
... . +. . ...+-+.+.. +++|++..++.|++++
T Consensus 318 ~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 318 FHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred ccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 321 0 00 0 1246666554 8899999999998875
No 224
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=3.5e-22 Score=179.51 Aligned_cols=285 Identities=11% Similarity=0.123 Sum_probs=191.7
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEE
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
.+...+++ +++|++. ..+++++++|+++|+..++ .++++||+|+++.+.|......+.....+. .
T Consensus 53 ~p~~~~le------~~lA~le-------g~~~~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~ 117 (364)
T PRK07269 53 NPTRAKLE------ETLAAIE-------SADYALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEG-R 117 (364)
T ss_pred CccHHHHH------HHHHHHh-------CCCeEEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcC-c
Confidence 45556677 9999997 4789999999999999888 466899999999999987665443321110 0
Q ss_pred ecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 87 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
+.+ .+..|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|+++.... ...++
T Consensus 118 ~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~-gi~vvvD~t~~~~~----~~~pl- 184 (364)
T PRK07269 118 FHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAK-GAKVIVDNTFYSPI----YQRPI- 184 (364)
T ss_pred EEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccc----cCCch-
Confidence 110 1235889999999999999999999999999998 99999999999 99999999975311 11222
Q ss_pred cCCCCCCceEEEecccccccccc-ceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
. .+-++++.|++|.++..| .=.|++++ ++++.++++......+...+++....+...|+. +..+.++
T Consensus 185 ~----~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-------L~~r~~~ 253 (364)
T PRK07269 185 E----LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-------LSLRMER 253 (364)
T ss_pred h----hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-------HHHHHHH
Confidence 1 244499999999996333 23577776 567777776555444556677776666666654 5666677
Q ss_pred HHHHHHHHHHHhcccCCc-eec-CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHH---------HccCEEeccCC
Q 018665 245 FRERRDFLVKSFGELEGV-KMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL---------DKAQVALVPGD 313 (352)
Q Consensus 245 ~~~~~~~l~~~l~~~~g~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~gi~i~~g~ 313 (352)
.+++...+.+.|++.|.+ .+. ++.+|. +.+.+.+. ....++.+.+. ....+.+.|+.
T Consensus 254 ~~~na~~~a~~L~~~p~v~~v~ypg~gg~-~sf~~~~~-----------~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~ 321 (364)
T PRK07269 254 STANAQEVVAFLKKSPAVKEVLYTGKGGM-ISFKVADE-----------TRIPHILNSLKVFTFAESLGGVESLITYPTT 321 (364)
T ss_pred HHHHHHHHHHHHHhCCCccEEeCCCcCcE-EEEEECCH-----------HHHHHHHHhCCcceEccCCCCcCeEeeCCcc
Confidence 788888899999988775 344 344454 44454321 02223333222 11233344433
Q ss_pred CCC-------------CCCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 314 AFG-------------DDTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 314 ~~~-------------~~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
... .++.+|+|++. |+.+.+++.|+.+++
T Consensus 322 ~~~~~~~~~~r~~~Gi~~~liRlsvGl--E~~~dli~dl~~al~ 363 (364)
T PRK07269 322 QTHADIPAEVRHSYGLTDDLLRLSIGI--EDARDLIADLKQALE 363 (364)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHhc
Confidence 211 14689999999 356666666666653
No 225
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.92 E-value=3.5e-22 Score=181.50 Aligned_cols=294 Identities=16% Similarity=0.205 Sum_probs=197.6
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
.+...+++ +.+|++++ .++++.++|+|+|+..++.++ +++||+|+++.++|..+...+...|.+++
T Consensus 32 g~~~~~le------~~la~~~g-------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v 98 (379)
T PRK11658 32 GPKNQALE------QAFCQLTG-------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVLLGATPV 98 (379)
T ss_pred CHhHHHHH------HHHHHHhC-------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHHcCCEEE
Confidence 34456666 99999986 346888999999999999998 78999999999999999999999999999
Q ss_pred EecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc-cccCCCCccc
Q 018665 86 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTS 164 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~-~~~~~~~~~~ 164 (352)
.++++. +++.+|++++++++++++++|+ |+|++|...+ +++|.++|+++ |+++|+|++++. ..+.+. .
T Consensus 99 ~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~-gi~vi~D~a~a~g~~~~~~---~ 167 (379)
T PRK11658 99 MVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERY-GIPVIEDAAHAVGTYYKGR---H 167 (379)
T ss_pred EEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHc-CCeEEEECCCccCCeECCe---e
Confidence 999874 4466899999999988888887 6667899998 89999999999 999999999984 222221 1
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccc--------------------cCCC--hHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFT--------------------SGAS--SISQ 221 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~--------------------~~~~--~~~~ 221 (352)
+ .. .+..++..+.+|.+ ++.+.|+++. ++++.++++....... .+.| ....
T Consensus 168 ~---g~-~g~~~~Sf~~~K~l--~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l 241 (379)
T PRK11658 168 I---GA-RGTAIFSFHAIKNI--TCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADI 241 (379)
T ss_pred c---CC-CCCEEEeCCCCCcC--cccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHH
Confidence 1 11 22233333445665 4446787776 4677777765331100 0111 1111
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC----CceE-EEeecCCccCCcccCCCCCCChHH
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFY-LFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
.++..... .+.+++..++-+++.+.+.+.|+++++..+..+. ..++ ..+.++... .+ .+.++
T Consensus 242 ~AAl~~~q-----l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~r~~ 308 (379)
T PRK11658 242 NAAIALVQ-----LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEER----CG----ISRDA 308 (379)
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCcc----cc----CCHHH
Confidence 22222222 4567777788888888889999887543332221 1222 223433210 00 16788
Q ss_pred HHHHHHHccCEEeccCC----C---CC-------C-------CCeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 297 LCRYLLDKAQVALVPGD----A---FG-------D-------DTCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~----~---~~-------~-------~~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
+.+.|.++ ||.+.... . |. . ...+.+.+.. +++++++.++.|++++-
T Consensus 309 ~~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~ 378 (379)
T PRK11658 309 LMEALKER-GIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIAG 378 (379)
T ss_pred HHHHHHHC-CCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 99998865 88754211 0 00 0 1346666555 88999999999998763
No 226
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.91 E-value=4.8e-22 Score=182.38 Aligned_cols=159 Identities=14% Similarity=0.183 Sum_probs=131.5
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADAT 83 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~ 83 (352)
+...+++ +.+|++++ .+..++++|+++++..++.+++++||+|+++.+.|.+.. ..++..|.+
T Consensus 57 p~~~~le------~~lA~l~g-------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 123 (418)
T TIGR01326 57 PTTDVLE------QRIAALEG-------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIE 123 (418)
T ss_pred hhHHHHH------HHHHHHhC-------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcE
Confidence 3345566 99999985 357889999999999999999999999999999987654 445678999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.++.+ |++++++++++++++|++++|+||+|.+.| +++|.++|+++ |+++|+|++++... ...
T Consensus 124 v~~v~~~-------d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~-~i~livD~t~~~~~----~~~ 188 (418)
T TIGR01326 124 VRFVDPD-------DPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAH-GVPLIVDNTFATPY----LCR 188 (418)
T ss_pred EEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCchhh----cCC
Confidence 9998742 789999999989999999999999999999 89999999999 99999999986421 111
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcCh
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 199 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~ 199 (352)
+ + ..+.++++.|++|.+|.+|.++|++++++
T Consensus 189 ~---l--~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 189 P---I--DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred c---h--hcCCeEEEECccccccCCccceEEEEEec
Confidence 1 1 13567999999999987899999998854
No 227
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=5.5e-22 Score=178.53 Aligned_cols=199 Identities=11% Similarity=0.118 Sum_probs=153.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeE
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 112 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~ 112 (352)
+.-++++++++|+..++.+++++||+|++++|.|.++.. .++..|+++..++.. +.+.+++++++++++
T Consensus 80 ~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~~Tkl 152 (395)
T PRK05967 80 AGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRPNTKV 152 (395)
T ss_pred CCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCcCceE
Confidence 344666668999999999999999999999999999874 457889999998642 357799999999999
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccc-cccce
Q 018665 113 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWR 191 (352)
Q Consensus 113 i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~ 191 (352)
|++++|+||++...+ +++|+++|+++ |+++|+|++++...+ ..+ .+++.++++.|.+|.++ .++.-
T Consensus 153 V~lesPsNP~l~v~d---l~~I~~la~~~-g~~vvVD~t~a~p~~----~~p-----l~~GaDivv~S~tKy~~Gh~d~~ 219 (395)
T PRK05967 153 VHTEAPGSNTFEMQD---IPAIAEAAHRH-GAIVMMDNTWATPLY----FRP-----LDFGVDISIHAATKYPSGHSDIL 219 (395)
T ss_pred EEEECCCCCCCcHHH---HHHHHHHHHHh-CCEEEEECCccCcee----cCh-----hHcCCCEEEEecccccCCCCCee
Confidence 999999999887777 99999999999 999999999864211 111 12456699999999984 33466
Q ss_pred eEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 018665 192 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 262 (352)
Q Consensus 192 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 262 (352)
.|+++.+++..+++.......+...+++....+...+++ +.-+.++..++...+.+.|++.|.+
T Consensus 220 ~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T-------l~lR~~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 220 LGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT-------MGIRLEHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred EEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc-------HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 788888887777776555555566777776655555543 5555666677777888888887765
No 228
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=8.1e-22 Score=179.23 Aligned_cols=213 Identities=14% Similarity=0.158 Sum_probs=159.4
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCCeEEEecccCCCC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISEN 94 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~~v~~i~~~~~~~ 94 (352)
|++.+|++.+ .+..+.++|+++|+..++.+++++||+|+++.++|.+.... ++..|+++.+++..
T Consensus 66 lE~~la~leg-------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~---- 134 (432)
T PRK06702 66 FEQKLAELEG-------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPN---- 134 (432)
T ss_pred HHHHHHHHhC-------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCC----
Confidence 4499999974 45678899999999999999999999999999999977765 68899999999642
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.|++++++++++++++|++++|+||++.+.+ +++|+++|+++ |+++|+|+++.. +.+... -.++-
T Consensus 135 --~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~-gi~livD~T~~t--------P~~~~p-l~~GA 199 (432)
T PRK06702 135 --LTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKEL-EVPFIVDNTLAT--------PYLCQA-FEHGA 199 (432)
T ss_pred --CCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHc-CCEEEEECCCCc--------hhhCCh-hhcCC
Confidence 5889999999999999999999999999999 99999999999 999999999742 222221 12355
Q ss_pred eEEEeccccccccccceeEEEEc-C----------hhH---------------------HHH-HHhhhhccccCCChHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAG-P----------KHF---------------------VAA-CNKIQSQFTSGASSISQ 221 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~-~----------~~~---------------------~~~-~~~~~~~~~~~~~~~~~ 221 (352)
+|++.|++|.+|..+--+|.+++ . ..+ +.+ .......++..++++..
T Consensus 200 DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a 279 (432)
T PRK06702 200 NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNA 279 (432)
T ss_pred CEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHH
Confidence 59999999976433333333222 1 111 111 11223344567888888
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCcee
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 264 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 264 (352)
..+...|++ +..+.++..++...+.+.|++.|.+..
T Consensus 280 ~l~~rgL~T-------l~lR~~r~~~Na~~la~~L~~~p~V~~ 315 (432)
T PRK06702 280 YISNIGLET-------LHLRMERHSENALAVAKWLADHERIEW 315 (432)
T ss_pred HHHHhccCc-------HHHHHHHHHHHHHHHHHHHHhCCCcce
Confidence 877777765 444455556888889999988876553
No 229
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=6.5e-22 Score=181.68 Aligned_cols=289 Identities=13% Similarity=0.118 Sum_probs=194.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHH-hcCC-------------eEEEecccCCCC---cc
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISEN---FL 96 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~-~~g~-------------~v~~i~~~~~~~---~~ 96 (352)
.+.++++++|++|++.+++... ....+|+.....|++....+. ..+. .+..++.+.... ..
T Consensus 101 ~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 180 (421)
T PRK06777 101 PAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVE 180 (421)
T ss_pred CceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHH
Confidence 3689999999999999998642 233578888888887764333 2221 011122221100 01
Q ss_pred cCHHHHHhhcc-----CCeeEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCC
Q 018665 97 LDPKVLESKLT-----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 97 ~d~~~l~~~l~-----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
.+++.+++.+. +++.++++...++..|. ++|.+.+++|.++|+++ |+++|+||++.++.++|. ..+......
T Consensus 181 ~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~g~-~~~~~~~~~ 258 (421)
T PRK06777 181 EALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH-GILLIADEVQTGFARTGK-LFAMEYYDV 258 (421)
T ss_pred HHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCccCCc-hhhhhhcCC
Confidence 23566777663 35677777777888885 57899999999999999 999999999999877664 223332222
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 250 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
..+ +.+++|.++ +|+|+|++++++++++.+.......+++.+++.+.++.++++.. +. +++.++++++.+
T Consensus 259 ~pD----iv~~sK~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~----~~-~~l~~~~~~~g~ 328 (421)
T PRK06777 259 KPD----LITMAKSLG-GGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVI----AE-EKLCQRALILGA 328 (421)
T ss_pred CCC----EEeeehhhc-CCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHH----Hh-ccHHHHHHHHHH
Confidence 112 447999999 89999999999999888776556667889999999999999751 11 355666666667
Q ss_pred HHHHHhccc----CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEee
Q 018665 251 FLVKSFGEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 326 (352)
Q Consensus 251 ~l~~~l~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~ 326 (352)
++.+.|+++ +.+..+.+.+.++ .+++..... +.........+.+.++++ ||.+.|+..+ .+++|+.++
T Consensus 329 ~l~~~L~~l~~~~~~i~~vrg~G~~~-~i~~~~~~~----~~~~~~~~~~l~~~~~~~-Gv~i~~~~~~--g~~lr~~pp 400 (421)
T PRK06777 329 HLVEVLEKAKASCPAIVDIRARGSMV-AVEFNDPQT----GKPSPEFTRQYQRQALEE-GLLLLSCGVH--GNVIRFLYP 400 (421)
T ss_pred HHHHHHHHHHHhCCCeEEecCceEEE-EEEEecCcc----CCccHHHHHHHHHHHHhC-CeEEeecCCC--CCEEEEeCC
Confidence 777766653 4445556666665 343322100 000000134455555654 9999997655 369999997
Q ss_pred c--CHHHHHHHHHHHHHHHh
Q 018665 327 A--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 327 ~--~~~~l~~~~~~l~~~~~ 344 (352)
. +++++++++++|++++.
T Consensus 401 l~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 401 LTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CCCCHHHHHHHHHHHHHHHh
Confidence 5 99999999999999874
No 230
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.91 E-value=3.9e-22 Score=181.96 Aligned_cols=284 Identities=13% Similarity=0.115 Sum_probs=193.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcC---------CCCEEEecCCCCCChHH-HHHhcCCeEE---EecccCC--CCcccCHHH
Q 018665 37 DQILVSNGAKQSILQAVLAVCS---------PGDEVIIPAPFWVSYPE-MARIADATPV---ILPTRIS--ENFLLDPKV 101 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~---------~~~~vl~~~~~~~~~~~-~~~~~g~~v~---~i~~~~~--~~~~~d~~~ 101 (352)
+.+++++||++|++.+++.... +..+|+....+|++... .+...+.... +-+.+.. .-.-.|++.
T Consensus 99 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 178 (408)
T PRK04612 99 EKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEA 178 (408)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHH
Confidence 7899999999999999986431 12468888888887653 3322221110 0111100 000127888
Q ss_pred HHhhccCCeeEEEEcCCCCCcccCC--CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEe
Q 018665 102 LESKLTEKSRLLILCSPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179 (352)
Q Consensus 102 l~~~l~~~~~~i~i~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 179 (352)
+++.++++..+.++..|.+++|.++ +.+++++|.++|+++ |+++|+||++.++.+.|.. +... ..+..+.+.
T Consensus 179 l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~~---~a~~--~~~~~pdi~ 252 (408)
T PRK04612 179 LEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQH-DALLVLDEIQCGMGRTGTL---FAHW--QEQVTPDIV 252 (408)
T ss_pred HHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCch---hhhh--hcCCCCCEE
Confidence 9988865556666666766565443 367999999999999 9999999999988766532 1111 124456789
Q ss_pred ccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc
Q 018665 180 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 259 (352)
Q Consensus 180 s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 259 (352)
+++|.+| +|+++|++++++++++.+.......+++.+++.+.++.++++.. + -+++.++.+++-+++.+.|+++
T Consensus 253 t~~K~l~-~G~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~----~-~~~l~~~~~~~g~~l~~~l~~l 326 (408)
T PRK04612 253 TLAKALG-GGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKL----A-SPQIAANVARQSAALRAGLEAL 326 (408)
T ss_pred EEcchhc-CCCceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHH----H-hccHHHHHHHHHHHHHHHHHHH
Confidence 9999998 89999999999988887766555567789999999999999762 1 1345555666666666666543
Q ss_pred ----CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHH
Q 018665 260 ----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQ 333 (352)
Q Consensus 260 ----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~ 333 (352)
+.+..+. ..|.++.+.+..... ..+..+.+.+.++ |+.+.+. ..+.+|+.++. +++|++
T Consensus 327 ~~~~~~i~~vr-g~Gl~~~i~~~~~~~---------~~a~~i~~~l~~~-Gvlv~~~----g~~~lRl~Ppl~it~eeid 391 (408)
T PRK04612 327 NAEFGVFAQVR-GRGLMLGAVLAPAHA---------GQAGAILDLAAEH-GLLLLQA----GPDVLRFVPALNLTDAELA 391 (408)
T ss_pred HhhCCCeeeee-ccceEEEEEecCchh---------hHHHHHHHHHHHC-CeEEeeC----CCCEEEEcCCccCCHHHHH
Confidence 2222333 335556666532100 1356788888865 9998764 24889999887 999999
Q ss_pred HHHHHHHHHHhhhC
Q 018665 334 AAVERIKKGLLTLR 347 (352)
Q Consensus 334 ~~~~~l~~~~~~~~ 347 (352)
+++++|++++.++-
T Consensus 392 ~~l~~l~~~l~~~~ 405 (408)
T PRK04612 392 DGLARLRLALADYV 405 (408)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999997653
No 231
>PRK05939 hypothetical protein; Provisional
Probab=99.91 E-value=5.4e-22 Score=180.22 Aligned_cols=211 Identities=15% Similarity=0.108 Sum_probs=155.3
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCc
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENF 95 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~ 95 (352)
|++.+|++.+ .+..++++++++|+..++.+++++||+|+++++.|..+. ..++..|.+++.++..
T Consensus 52 lE~~la~leg-------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~----- 119 (397)
T PRK05939 52 LEAKITKMEG-------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT----- 119 (397)
T ss_pred HHHHHHHHhC-------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-----
Confidence 3399999875 444566667799999999999999999999999998754 3567789999999752
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++++... .+. +...+.+
T Consensus 120 --d~e~l~~~l~~~tklV~vesp~NptG~v~d---l~~I~~la~~~-gi~livD~t~a~~~-------~~~--~~~~gaD 184 (397)
T PRK05939 120 --DVQNVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALCRER-GLLYVVDNTMTSPW-------LFR--PKDVGAS 184 (397)
T ss_pred --CHHHHHHhCCCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHc-CCEEEEECCccccc-------ccC--ccccCCE
Confidence 789999999999999999999999999988 99999999999 99999999985311 111 1113567
Q ss_pred EEEeccccccccccceeEEEEcChhH----------------------HHHHHh-hhhccccCCChHHHHHHHHHhcccC
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHF----------------------VAACNK-IQSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~----------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
+++.|++|.++..|.++|+++.++.. +..+.. .........++.....+...++
T Consensus 185 ivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~--- 261 (397)
T PRK05939 185 LVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAE--- 261 (397)
T ss_pred EEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcC---
Confidence 99999999998778898998764211 111111 1123344556655554444444
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.+..+.++..++...+.+.|++.|.+.
T Consensus 262 ----tl~~R~~~~~~na~~la~~L~~~p~V~ 288 (397)
T PRK05939 262 ----TLALRVDRSCSNALALAQFLEAHPKVA 288 (397)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 345555556668888888888776653
No 232
>PLN02509 cystathionine beta-lyase
Probab=99.91 E-value=5.6e-22 Score=181.89 Aligned_cols=210 Identities=12% Similarity=0.135 Sum_probs=153.7
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCeEEEecccCCCC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISEN 94 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~v~~i~~~~~~~ 94 (352)
|++.+|++. ..+..++++|+++++..++ .++++||+|+++.+.|..+.. .+...|.+++.++.
T Consensus 138 LE~~lA~le-------g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~----- 204 (464)
T PLN02509 138 LESLLAKLD-------KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT----- 204 (464)
T ss_pred HHHHHHHHh-------CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC-----
Confidence 336666665 3567778888899986555 578999999999999998863 44578999988863
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++++.... + .++ ..+.
T Consensus 205 --~d~e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~-g~~lIVD~A~a~~~~-~---~pl-----~~ga 269 (464)
T PLN02509 205 --TNLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQ-GALVLVDNSIMSPVL-S---RPL-----ELGA 269 (464)
T ss_pred --CCHHHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHc-CCEEEEECCcccccc-C---Chh-----hcCC
Confidence 2789999999989999999999999999877 99999999999 999999999864221 1 111 1244
Q ss_pred eEEEecccccccccc-ceeEEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTG-WRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g-~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
++++.|++|.++.+| .-.|+++++. .+...++..+.......+++....+...+ +.+..+.++.+++...+
T Consensus 270 Divv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L-------~tL~~R~~r~~~nA~~l 342 (464)
T PLN02509 270 DIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGI-------KTMALRIEKQQENARKI 342 (464)
T ss_pred cEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhh-------hhHHHHHHHHHHHHHHH
Confidence 599999999996333 3367777644 44555444433333345665544444444 44667778888889999
Q ss_pred HHHhcccCCce
Q 018665 253 VKSFGELEGVK 263 (352)
Q Consensus 253 ~~~l~~~~g~~ 263 (352)
.+.|++.|.+.
T Consensus 343 a~~L~~~p~V~ 353 (464)
T PLN02509 343 AMYLSSHPRVK 353 (464)
T ss_pred HHHHhcCCCcc
Confidence 99999887764
No 233
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=1.3e-21 Score=179.48 Aligned_cols=290 Identities=13% Similarity=0.143 Sum_probs=193.0
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-cC-------------CeEEEecccCCCCccc---
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD-------------ATPVILPTRISENFLL--- 97 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~g-------------~~v~~i~~~~~~~~~~--- 97 (352)
+.+++++|+++|++.+++... ....+|+.....|++....... .+ ..+..+|.+.... ..
T Consensus 102 ~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~ 180 (425)
T PRK07495 102 KKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELH-GVSVE 180 (425)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccc-cccHH
Confidence 689999999999999998642 2345788888878776432211 11 1334444442211 12
Q ss_pred -CHHHHHhhcc-----CCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCC
Q 018665 98 -DPKVLESKLT-----EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 98 -d~~~l~~~l~-----~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
+++.+++.+. +++++|++...+..+| ..+|.+.+++|.++|++| |+++|+||++.++.++|.. .....
T Consensus 181 ~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tG~gr~G~~-~a~~~--- 255 (425)
T PRK07495 181 QSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQH-GILLIADEVQTGFARTGKL-FAMEH--- 255 (425)
T ss_pred HHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhcCCcCCCc-eeecc---
Confidence 2445566553 3567777766655578 457899999999999999 9999999999988776642 11211
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 250 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
.+....+.+++|.++ +|+++|++++++++++.+.......+++.|++.++++.++++.-. . .++.++.+++.+
T Consensus 256 -~gv~pDi~tlsK~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~--~---~~l~~~~~~~g~ 328 (425)
T PRK07495 256 -HEVAADLTTMAKGLA-GGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIE--E---EDLCERANQLGN 328 (425)
T ss_pred -cCCCCCEEeehhhhc-CCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH--h---chHHHHHHHHHH
Confidence 233455889999998 899999999999998887655556678899999998888876511 1 123334444444
Q ss_pred HHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEee
Q 018665 251 FLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 326 (352)
Q Consensus 251 ~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~ 326 (352)
++.+.|++ +|.+.-+.. .|.++++++.+....... ......+.+.++++ |+.+.+.+. ..+.+|+.++
T Consensus 329 ~l~~~L~~l~~~~~~i~~vrG-~Gl~~~iel~~~~~~~~~----~~~~~~~~~~~~~~-Gvl~~~~g~--~~~~~r~~Pp 400 (425)
T PRK07495 329 RLKQRLASLRETVPEIADIRG-PGFMNAVEFNDADSGLPS----AEFANRVRLKALEK-GLILLTCGV--HGNVIRFLAP 400 (425)
T ss_pred HHHHHHHHHHhhCCCeeeeec-CceEEEEEEecCCCCCcc----HHHHHHHHHHHHHC-CeEEeecCC--CCCEEEEeCC
Confidence 44444443 343333333 388899988432110000 00134677777765 898865322 1478999988
Q ss_pred c--CHHHHHHHHHHHHHHHhhhC
Q 018665 327 A--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 327 ~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
. +++++++++++|++++++++
T Consensus 401 l~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 401 ITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CccCHHHHHHHHHHHHHHHHHHh
Confidence 7 99999999999999998765
No 234
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=7.2e-22 Score=178.64 Aligned_cols=216 Identities=10% Similarity=0.120 Sum_probs=157.8
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADAT 83 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~ 83 (352)
+...+++ +.+|++.+ ... .++++++++++..++ .++++||+|+++.|.|.+... .++..|++
T Consensus 50 p~~~~Le------~~lA~l~g------~~~-~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~ 115 (377)
T PRK07671 50 PTRAALE------ELIAVLEG------GHA-GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIE 115 (377)
T ss_pred hHHHHHH------HHHHHHhC------CCc-eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeE
Confidence 3345566 99999985 233 455666778887655 577899999999999985543 44568999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.++. .|++++++++++++++|++++|+||+|.+.+ +++|.++|+++ |+++|+|++++...+. .
T Consensus 116 v~~v~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~-g~~lvvD~a~~~~~~~----~ 180 (377)
T PRK07671 116 HTFVDT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEK-GLLTIVDNTFMTPYWQ----S 180 (377)
T ss_pred EEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCCccccC----C
Confidence 998874 2889999999989999999999999999998 99999999999 9999999998642211 1
Q ss_pred ccccCCCCCCceEEEecccccccccc-ceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
++ ..+.++++.|++|.+|.++ .-.|++++ ++++++++...+.......++.....+...+ +.+..+
T Consensus 181 p~-----~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l-------~tl~~R 248 (377)
T PRK07671 181 PI-----SLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGL-------KTLGIR 248 (377)
T ss_pred hh-----hhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCc-------ChHHHH
Confidence 11 1244599999999996333 23565665 5678888877666555556665555444333 335556
Q ss_pred HHHHHHHHHHHHHHhcccCCcee
Q 018665 242 VKAFRERRDFLVKSFGELEGVKM 264 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~ 264 (352)
.++..++...+.+.|++.|++..
T Consensus 249 ~~~~~~na~~la~~L~~~~~v~~ 271 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNHPAVNK 271 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeE
Confidence 77777888899999988776533
No 235
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.91 E-value=6.2e-22 Score=184.56 Aligned_cols=309 Identities=18% Similarity=0.152 Sum_probs=200.9
Q ss_pred CCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHH--HH-HhcCCCC----EEEecCCCCCChHHHHH
Q 018665 7 SQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQA--VL-AVCSPGD----EVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~--~~-~l~~~~~----~vl~~~~~~~~~~~~~~ 78 (352)
..|..+++ ..+.+++. ..| ++...+..++|+++.+..+ ++ .+.++|| +|+++.+.|+.+...++
T Consensus 108 sqG~lel~------~~~~~~la~l~G--~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~ 179 (481)
T PRK04366 108 VQGALELM------YELQEWLKEITG--MDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA 179 (481)
T ss_pred hhHHHHHH------HHHHHHHHHHhC--CCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH
Confidence 34555666 55555554 334 3344454445555444422 22 2345555 99999999999999999
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
..|.+++.++++ .++.+|++.|++++++++++|++++|+ |+|.. ...+++|+++|+++ |+++++|+++.....
T Consensus 180 ~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~-gal~iVD~a~~~~~~- 252 (481)
T PRK04366 180 MAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF--ERNILEIAEIVHEA-GGLLYYDGANLNAIL- 252 (481)
T ss_pred HcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc--chHHHHHHHHHHHc-CCEEEEEecChhhhc-
Confidence 999999999985 346789999999999899999999988 89965 23499999999999 999999999853211
Q ss_pred CCCccccccCCCCCCceEEEeccccccccc----cceeEEEEcChhHHHHHHhhh-------------------hccccC
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMT----GWRLGYIAGPKHFVAACNKIQ-------------------SQFTSG 215 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~~~g~l~~~~~~~~~~~~~~-------------------~~~~~~ 215 (352)
+. .. +...+-+++++|.+|++|.| |..+|++.+++++.+.+.... +...++
T Consensus 253 g~--~~----~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t 326 (481)
T PRK04366 253 GK--AR----PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFY 326 (481)
T ss_pred cc--CC----ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCccccc
Confidence 11 11 12245669999999998633 456889888887776652100 000111
Q ss_pred CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE-EEeecCCccCCcccCCCCCCCh
Q 018665 216 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY-LFIDFSTYYGSEAEGFGKIENS 294 (352)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
.+.....++...+.. ++.+.++++.++..++.+++.+.|+++..+.+ +...+. +.+.++.. ...+ .+.
T Consensus 327 ~~~l~~~~a~~~l~~--~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~--~~~~~~~~~~~~~~~---~~~g----~~~ 395 (481)
T PRK04366 327 GNFGVLVRAYAYIRS--LGAEGLREVSEDAVLNANYLKARLKDIYDLPY--DRPCMHEFVLSGKKL---KETG----VRT 395 (481)
T ss_pred CchHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhHhhCcccC--CCCeeEEEEEECccc---cccC----CCH
Confidence 122222333333332 23566777778888889999999987623322 211111 22333210 0011 167
Q ss_pred HHHHHHHHHccCEEeccCCCC-CCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 295 ESLCRYLLDKAQVALVPGDAF-GDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~~-~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.++.++|.++ ||.+...... ...+.+|++++. +.+||+++++.|+++.++...
T Consensus 396 ~~v~~~L~~~-Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 396 LDIAKRLLDY-GFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred HHHHHHHHHC-CccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8999999976 8876421111 125689999986 889999999999999877654
No 236
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.91 E-value=7.1e-22 Score=181.31 Aligned_cols=276 Identities=16% Similarity=0.171 Sum_probs=191.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhc----------CCCCEEEecCCCCCCh-HHHHHhcCC------------eEEEecccCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVC----------SPGDEVIIPAPFWVSY-PEMARIADA------------TPVILPTRIS 92 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~----------~~~~~vl~~~~~~~~~-~~~~~~~g~------------~v~~i~~~~~ 92 (352)
.+.++++++|++|++.+++.+. ...+.|+....+|++. ...+...+. .+..++.
T Consensus 94 ~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 170 (401)
T TIGR01885 94 YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY--- 170 (401)
T ss_pred CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC---
Confidence 4689999999999999998752 2246788788887753 444443221 1222221
Q ss_pred CCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccC
Q 018665 93 ENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~ 168 (352)
.|++.|++.++ ++..+++++.+++++|...| .+.+++|.++|++| |+++|+||+|.++.++|.. ... ..
T Consensus 171 ----~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~g~~G~~-~~~-~~ 243 (401)
T TIGR01885 171 ----NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH-NVLLIADEIQTGLGRTGKL-LCV-DH 243 (401)
T ss_pred ----CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchh-hHH-hh
Confidence 26888888774 46678888888999999886 44799999999999 9999999999887666532 121 11
Q ss_pred CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH
Q 018665 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 248 (352)
Q Consensus 169 ~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 248 (352)
....++ + .+++|.++.+++|+|++++++++++.+.......+++.+++.+.++.++++.. .+ +.+.++.+++
T Consensus 244 ~~~~~d-i--~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i---~~--~~l~~~~~~~ 315 (401)
T TIGR01885 244 ENVKPD-I--VLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVL---EE--EKLAENAEKL 315 (401)
T ss_pred cCCCCC-E--EEeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHH
Confidence 111122 2 24679998555899999999999888765334445677899999999988752 11 1344566777
Q ss_pred HHHHHHHhcccC-Cc-eecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEee
Q 018665 249 RDFLVKSFGELE-GV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 326 (352)
Q Consensus 249 ~~~l~~~l~~~~-g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~ 326 (352)
.+++.+.|+++. ++ ..+.+ .|.+..+.++.... + ..+.++++.|.++ ||.+.|+. ++.+|++++
T Consensus 316 ~~~~~~~L~~l~~~~~~~~~g-~g~~~~i~~~~~~~----~----~~~~~l~~~l~~~-Gv~v~~~~----~~~lRi~p~ 381 (401)
T TIGR01885 316 GEIFRDQLKKLPKPIITEVRG-RGLLNAIVIDESKT----G----RTAWDLCLKLKEK-GLLAKPTH----GNIIRLAPP 381 (401)
T ss_pred HHHHHHHHHhccCCceeEEee-cCeeEEEEeccCcc----h----hHHHHHHHHHHhC-CEEEEecC----CCEEEEeCC
Confidence 888888888772 22 22223 34444444433200 0 0467899998865 99997752 678999987
Q ss_pred c--CHHHHHHHHHHHHHHH
Q 018665 327 A--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 327 ~--~~~~l~~~~~~l~~~~ 343 (352)
. +++++++++++|++++
T Consensus 382 l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 382 LVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ccCCHHHHHHHHHHHHHHh
Confidence 5 9999999999999876
No 237
>PLN02624 ornithine-delta-aminotransferase
Probab=99.91 E-value=6e-22 Score=184.16 Aligned_cols=280 Identities=15% Similarity=0.127 Sum_probs=186.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-----C----C-CEEEecCCCCCChHHHHHhcCC-------------eEEEecccCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS-----P----G-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRIS 92 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~-----~----~-~~vl~~~~~~~~~~~~~~~~g~-------------~v~~i~~~~~ 92 (352)
.+.++++++|++|++.+++.... + + ..|+....+|++.......... .+..++.
T Consensus 132 ~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~--- 208 (474)
T PLN02624 132 YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF--- 208 (474)
T ss_pred CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC---
Confidence 46899999999999999975432 1 2 3577777777776433222111 1122221
Q ss_pred CCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCEEEEecccccccccCCCCccccccC
Q 018665 93 ENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~-~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~ 168 (352)
.|++.+++.++ +++++|+++.++|++|.++|.+ ++++|.++|++| |+++|+||+|.+++++|... .. ..
T Consensus 209 ----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~-gillI~DEv~tG~GrtG~~~-a~-~~ 281 (474)
T PLN02624 209 ----GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKH-NVLMIADEIQTGLARTGKML-AC-DW 281 (474)
T ss_pred ----CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCcCcCcchh-hH-Hh
Confidence 26788888885 4678889999999999987666 699999999999 99999999999876666421 11 11
Q ss_pred CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH
Q 018665 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 248 (352)
Q Consensus 169 ~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 248 (352)
.... ..+.+++|.+|.+++++|+++.++++++.+.......+++.+++.+.++.++++... . .++.++..++
T Consensus 282 ~~i~---pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~--~---~~l~~~~~~~ 353 (474)
T PLN02624 282 EEVR---PDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQ--D---EKLAERSAKL 353 (474)
T ss_pred cCCC---CCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHH--h---chHHHHHHHH
Confidence 1111 224447899985558999999999888877655555666789999999999987511 1 1233334444
Q ss_pred HHHHHHHhcc----cCC-ceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEE
Q 018665 249 RDFLVKSFGE----LEG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 323 (352)
Q Consensus 249 ~~~l~~~l~~----~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi 323 (352)
.+.+.+.|++ ++. +..+.+. |.++.+.+..... . ...+.++++.|.++ ||.+.|+ .++++|+
T Consensus 354 ~~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~l~~~~~---~----~~~a~~~~~~L~e~-GV~v~p~----~~~~lR~ 420 (474)
T PLN02624 354 GQELRDQLQKIQKQFPKLIKEVRGR-GLLNAVVLNSPKL---G----PVSAYDVCLKLKER-GLLAKPT----HDTIIRL 420 (474)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEee-EEEEEEEecCCCc---C----hHHHHHHHHHHHhC-CeEEecC----CCCEEEE
Confidence 4444444443 222 3333344 4444444432100 0 01356788888765 9999885 3678999
Q ss_pred Eeec--CHHHHHHHHHHHHHHHhhh
Q 018665 324 SYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 324 ~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+++. ++++|++++++|+++++..
T Consensus 421 ~p~l~~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 421 APPLSISEDELQECSKALSDVLEHD 445 (474)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9865 9999999999999988654
No 238
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.91 E-value=1.4e-21 Score=175.10 Aligned_cols=292 Identities=13% Similarity=0.145 Sum_probs=199.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChH-HHHHhcC-------------CeEEEecccCCC--Ccc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYP-EMARIAD-------------ATPVILPTRISE--NFL 96 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~-~~~~~~g-------------~~v~~i~~~~~~--~~~ 96 (352)
..+.++++++|++|++.+++... .....|+.....|++.. ..+...+ ..+..+|.+... .+.
T Consensus 116 ~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~ 195 (447)
T COG0160 116 GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFG 195 (447)
T ss_pred cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCccc
Confidence 35789999999999999998742 23456777776666544 3333221 235555555321 111
Q ss_pred --------cCHHHHHhhcc------CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 97 --------LDPKVLESKLT------EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 97 --------~d~~~l~~~l~------~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
-..+.+++.+. .++.++++...+...|.. .|.++++++.++|+++ |+++|+||++.+++.+|+
T Consensus 196 ~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~-gillI~DEVQtG~GRTG~- 273 (447)
T COG0160 196 IGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH-GILLIADEVQTGFGRTGK- 273 (447)
T ss_pred CchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcccc-
Confidence 12334555342 267888888888888866 5677899999999999 999999999999998883
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
...+....- ..-+-+++|.+| +|+++|.++.++++.+ .......++++.|+++.+++.+.|+... -+.+
T Consensus 274 ~fa~E~~gv----~PDivt~aK~ig-~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie-----~e~L 342 (447)
T COG0160 274 MFAFEHFGV----EPDIVTLAKSLG-GGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIE-----EENL 342 (447)
T ss_pred chhhhhcCC----CCCEEEeccccc-CCCceeEEeccHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHH-----HccH
Confidence 444444332 233777899999 7999999999999988 5555566679999999999999998521 1244
Q ss_pred HHHHHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 242 VKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
.++..+.-+++.+.|.+ .|-+.-+ ...|.++.+++-+....+... .+....+.++++++ |+.+..++. .
T Consensus 343 ~~~a~~~G~~l~~~L~~l~~~~~~IgdV-RG~Glm~giE~v~d~~t~~p~---~~~~~~i~~~~~~~-Glil~~~G~--~ 415 (447)
T COG0160 343 LERAAELGEYLRDRLEELQEKHPLIGDV-RGLGLMIGVELVKDRDTKEPD---AELAAKIVARAFER-GLLLLTCGP--H 415 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCceecc-cccceEEEEEEecCCCCCCCC---HHHHHHHHHHHHHc-CCEEeccCC--C
Confidence 44555555555555544 3322222 234666777764321110000 01356888998877 887766543 2
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+||.++. ++|++++++++|.+++++.
T Consensus 416 ~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 416 GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 6899999988 9999999999999999864
No 239
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.91 E-value=1.9e-21 Score=175.88 Aligned_cols=207 Identities=13% Similarity=0.124 Sum_probs=148.3
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++.+ .+..+++++++.|+..++ .++++||+|+++++.|.+.. ..++..|++++.++.
T Consensus 57 ~~la~l~g-------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~------- 121 (380)
T PRK06176 57 ELIADLEG-------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT------- 121 (380)
T ss_pred HHHHHHhC-------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC-------
Confidence 99999975 334466677788998655 56799999999999997654 345678999888874
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.|++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++++.... ..++ ..+.++
T Consensus 122 ~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~-gi~vivD~t~a~~~~----~~p~-----~~gaDi 188 (380)
T PRK06176 122 SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDH-GLLTIVDNTFATPYY----QNPL-----LLGADI 188 (380)
T ss_pred CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHc-CCEEEEECCcccccc----CCcc-----ccCCCE
Confidence 2799999999989999999999999999999 88999999999 999999999875321 1121 134459
Q ss_pred EEecccccccccc-ceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 177 ~~~s~sK~~g~~g-~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
++.|++|.++.++ .-.|+++.+ +++.++++..+.......++.....+...+. .+..+.++..++...+.+
T Consensus 189 vv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~-------tl~~R~~~~~~~a~~la~ 261 (380)
T PRK06176 189 VVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK-------TLGLRMEAHQKNALCVAE 261 (380)
T ss_pred EEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC-------cHHHHHHHHHHHHHHHHH
Confidence 9999999996444 346667764 5666767665554444445555444433332 234444445556667777
Q ss_pred HhcccCCc
Q 018665 255 SFGELEGV 262 (352)
Q Consensus 255 ~l~~~~g~ 262 (352)
.|++.|.+
T Consensus 262 ~L~~~p~v 269 (380)
T PRK06176 262 FLEKHPKV 269 (380)
T ss_pred HHHhCCCe
Confidence 77766554
No 240
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.90 E-value=2.5e-21 Score=177.33 Aligned_cols=286 Identities=11% Similarity=0.079 Sum_probs=186.3
Q ss_pred cEEE-eCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHH-HHhcC------------CeEEEecccCCCCc-ccCHH
Q 018665 38 QILV-SNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEM-ARIAD------------ATPVILPTRISENF-LLDPK 100 (352)
Q Consensus 38 ~i~~-~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~-~~~~g------------~~v~~i~~~~~~~~-~~d~~ 100 (352)
.+++ +++|++|++.+++... ....+|+.....|++.... +...+ ..+..+|.+..... .-+++
T Consensus 100 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (412)
T TIGR02407 100 KVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIA 179 (412)
T ss_pred eEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHH
Confidence 4655 5899999999998753 2346788888888876533 32221 12333443211000 02466
Q ss_pred HHHhhcc------CCeeEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 101 VLESKLT------EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 101 ~l~~~l~------~~~~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
.+++.+. +++.+|++...+++.|. ++|.+++++|.++|+++ |+++|+||++.+++.+|... ........++
T Consensus 180 ~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GRtG~~~-a~~~~~v~PD 257 (412)
T TIGR02407 180 YFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRH-DILLIVDDIQAGCGRTGTFF-SFEPAGIEPD 257 (412)
T ss_pred HHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchhH-HhcccCCCCC
Confidence 7777774 35677787777888887 57888999999999999 99999999999887666421 1111111122
Q ss_pred ceEEEeccccccccc-cceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMT-GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~-g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+.+++|.+| + |+|+|++++++++ +.+.......+++.|++...++.++++.-.......+++.+.-+..++.+
T Consensus 258 ----i~~~~K~lg-~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l 331 (412)
T TIGR02407 258 ----IVCLSKSIS-GYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERL 331 (412)
T ss_pred ----EEEechhcc-CCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 456889998 6 9999999998876 55543445567788898888777777631111222222222222222333
Q ss_pred HHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHH
Q 018665 253 VKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLT 330 (352)
Q Consensus 253 ~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~ 330 (352)
.+..++++++.......|.++|+++++.. ....+.+.+.++ ||.+.+... ..+.+|++++. +++
T Consensus 332 ~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~-----------~~~~~~~~~~~~-Gv~v~~~~~--~~~~lr~~p~l~~t~~ 397 (412)
T TIGR02407 332 DRIVAEYPELIKQVRGRGLMQGIECGDGD-----------LAGKIAKAAFEN-GLIIETSGP--NDEVIKLLPPLTIDEE 397 (412)
T ss_pred HHHHhhCCCceEeeecceeEEEEEecChH-----------HHHHHHHHHHHC-CCEEeccCC--CCCEEEEECCCCCCHH
Confidence 33223343333334556888999987531 456788888865 999876432 25789999987 999
Q ss_pred HHHHHHHHHHHHHhh
Q 018665 331 TLQAAVERIKKGLLT 345 (352)
Q Consensus 331 ~l~~~~~~l~~~~~~ 345 (352)
|+++++++|++++++
T Consensus 398 ~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 398 TLQQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999864
No 241
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.90 E-value=4.7e-22 Score=183.17 Aligned_cols=292 Identities=14% Similarity=0.162 Sum_probs=188.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhc-CC------------eEE-----EecccCCCC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIA-DA------------TPV-----ILPTRISEN 94 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~-g~------------~v~-----~i~~~~~~~ 94 (352)
..+.+++++|+++|++.+++.... .+++|+..++.|+++...+... +. ... .+..+ .
T Consensus 105 ~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 181 (426)
T PRK00062 105 SIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP--Y- 181 (426)
T ss_pred CCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC--C-
Confidence 357899999999999999987532 3578999999999876333221 10 000 01111 1
Q ss_pred cccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCC
Q 018665 95 FLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 95 ~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
.|++.+++.+. +++++|+++...+.+|...+ .+++++|.++|++| |+++|+||+|.++ ..+. .........
T Consensus 182 --~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~G~-r~g~-~~~~~~~~~ 256 (426)
T PRK00062 182 --NDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH-GALLIFDEVMTGF-RVAL-GGAQGYYGV 256 (426)
T ss_pred --CCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeechhcc-ccCC-ccHHHHhCC
Confidence 27888888774 36677777766666887775 88899999999999 9999999999987 3332 111111111
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHh---hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 247 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 247 (352)
.++ +.+++|.++ +|+++|++++++++++.+.. .....+++.+++.++++.++++.... .+..+++.+..+.
T Consensus 257 ~pD----i~~~gK~l~-~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~~~~~~~~~ 330 (426)
T PRK00062 257 TPD----LTTLGKIIG-GGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYEELEALTKR 330 (426)
T ss_pred Ccc----hHhhhhHhh-CCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHH
Confidence 112 578999998 88999999999999888852 22334567899999999999886321 2344444444555
Q ss_pred HHHHHHHHhcccCCceecCCCCceEEEeecCCccCC-cccCCCC-CCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEe
Q 018665 248 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325 (352)
Q Consensus 248 ~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~ 325 (352)
.++.+.+.+++. ++.......|.++.+.+...... ....... ......+.+.|.++ |+.+.+.. .+.+++++
T Consensus 331 ~~~~l~~~~~~~-~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v~~~~----~~~~~~~~ 404 (426)
T PRK00062 331 LAEGLKEAAKKA-GIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYLAPSQ----FEAGFVSA 404 (426)
T ss_pred HHHHHHHHHHHc-CCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEeecCC----cCceeeec
Confidence 555555544445 43332223344454544321000 0000000 00135788888876 99997742 34678887
Q ss_pred ecCHHHHHHHHHHHHHHHhhh
Q 018665 326 AASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 326 ~~~~~~l~~~~~~l~~~~~~~ 346 (352)
..+++|+++++++|+++++++
T Consensus 405 ~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 405 AHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred cCCHHHHHHHHHHHHHHHHhh
Confidence 779999999999999998764
No 242
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=7.2e-21 Score=175.32 Aligned_cols=291 Identities=10% Similarity=0.115 Sum_probs=189.8
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChH-HHHHhcCC------------eEEEecccCCCC--cc---
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADA------------TPVILPTRISEN--FL--- 96 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~-~~~~~~g~------------~v~~i~~~~~~~--~~--- 96 (352)
+.++++++|++|++.+++... ....+|+.....|++.. ..+...+. .+..++.+.... +.
T Consensus 102 ~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK08360 102 PKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEP 181 (443)
T ss_pred CEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCch
Confidence 689999999999999998742 23357887777777654 33332221 123333221100 00
Q ss_pred -----cCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 97 -----LDPKVLESKLT-----EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 97 -----~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.+++.+++.+. +++++++++..+||+|..++ .+++++|.++|+++ |+++|+||++.++.++|.. .+.
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~gr~G~~-~a~ 259 (443)
T PRK08360 182 GSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH-GILLVVDEVQSGLGRTGKW-FAI 259 (443)
T ss_pred hhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCccc-hhh
Confidence 12344555552 46788888766899998876 55899999999999 9999999999998776642 222
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 245 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (352)
..... .++ +.++||.+| +|+|+|++++++++++.+......++++.+++.+.++.++++.-.. + ++.++.
T Consensus 260 ~~~~~-~pD---iitlsK~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~-~----~l~~~~ 329 (443)
T PRK08360 260 EHFGV-EPD---IITLGKPLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE-K----NLLKRA 329 (443)
T ss_pred hhcCC-CCC---EEEeccccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH-c----CHHHHH
Confidence 22221 122 336799999 8999999999999999887655566778899999999999875211 1 234444
Q ss_pred HHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 246 RERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 246 ~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
+++-+++.+.|++ .+.+.-+. ..|.++-+++.+....+.... ..+..+.+.+.++ |+.+.+. ..+.+
T Consensus 330 ~~~g~~l~~~L~~l~~~~~~v~~vr-g~Gl~~gie~~~~~~~~~~~~---~~~~~~~~~l~~~-Gi~~~~~----~~~~l 400 (443)
T PRK08360 330 EKLGNYTKKRLEEMKKKHELIGDVR-GIGLMIGVDLVKDRETKERAY---EEAAKVVWRAWEL-GLIVTFF----SGNVL 400 (443)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeee-ccceEEEEEEecCCcccCccH---HHHHHHHHHHHHC-CeEEeec----CCCEE
Confidence 4444444444443 33232233 345556666532110000000 0245677888865 8988653 25789
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 322 RISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 322 Ri~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
|++++. ++++++++++++.++++++..
T Consensus 401 r~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 401 RIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 997776 999999999999999988765
No 243
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.90 E-value=4e-21 Score=172.41 Aligned_cols=209 Identities=19% Similarity=0.229 Sum_probs=159.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH----hcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~----~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|+.- ..+..+++++|++|+..++.+++++||+|+++...|.+....++ ..|+++.+++.
T Consensus 62 ~~la~Le-------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~------- 127 (386)
T PF01053_consen 62 QRLAALE-------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP------- 127 (386)
T ss_dssp HHHHHHH-------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-------
T ss_pred HHHHHhh-------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-------
Confidence 8888886 46889999999999999999999999999999999999886665 47999998864
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC-EEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~-~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
-|++++++++++++++|++..|.||+..+.+ +++|+++|+++ | +++++|+++.... ...++. ++-+
T Consensus 128 ~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~-g~~~~vVDnT~atp~----~~~pL~-----~GaD 194 (386)
T PF01053_consen 128 TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEH-GDILVVVDNTFATPY----NQNPLE-----LGAD 194 (386)
T ss_dssp TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHT-TT-EEEEECTTTHTT----TC-GGG-----GT-S
T ss_pred hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHh-CCceEEeecccccee----eeccCc-----CCce
Confidence 2899999999999999999999999999999 99999999999 9 9999999986421 111111 3455
Q ss_pred EEEecccccccccc-ceeEEEEcCh--hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMTG-WRLGYIAGPK--HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 176 i~~~s~sK~~g~~g-~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+++.|.+|.++..+ .=.|.++++. ++.+.++......+..+++.....+...+++ +.-+.++..++...+
T Consensus 195 ivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-------l~~R~~~~~~nA~~l 267 (386)
T PF01053_consen 195 IVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRT-------LPLRMERQNENAEAL 267 (386)
T ss_dssp EEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-------HHHHHHHHHHHHHHH
T ss_pred EEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCc-------HHHHHHHHHHHHHHH
Confidence 99999999995233 3367777554 7888888777777777888877777776655 556666777788889
Q ss_pred HHHhcccCCce
Q 018665 253 VKSFGELEGVK 263 (352)
Q Consensus 253 ~~~l~~~~g~~ 263 (352)
.+.|++.|.+.
T Consensus 268 A~~L~~hp~V~ 278 (386)
T PF01053_consen 268 AEFLEEHPKVK 278 (386)
T ss_dssp HHHHHTSTTEE
T ss_pred HHHHHhCCCCC
Confidence 99999887765
No 244
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=2.9e-21 Score=176.91 Aligned_cols=211 Identities=12% Similarity=0.133 Sum_probs=153.3
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCCCC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISEN 94 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~~~ 94 (352)
|++.+|++.+ .+..++++|+++|++.++.+++++||+|+++...|.+....+ +..|+++++++..
T Consensus 69 le~~lA~l~g-------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---- 137 (433)
T PRK08134 69 LEERVAALEG-------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG---- 137 (433)
T ss_pred HHHHHHHHhC-------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC----
Confidence 3499999875 345788999999999999999999999999999998775544 5589999999863
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
|++++++++++++++|++.+|+||+|.+.| +++|+++|+++ |+++|+|+++... ....++ . .+-
T Consensus 138 ---d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~-gi~livD~t~a~~----~~~~pl-~----~Ga 201 (433)
T PRK08134 138 ---DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEA-GVPLLVDSTFTTP----YLLRPF-E----HGA 201 (433)
T ss_pred ---CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHc-CCEEEEECCCccc----ccCCch-h----cCC
Confidence 789999999999999999999999999999 99999999999 9999999998642 111222 1 345
Q ss_pred eEEEeccccccccccceeEEEEcC-hh--------------------------------HHHHHH-hhhhccccCCChHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGP-KH--------------------------------FVAACN-KIQSQFTSGASSIS 220 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~-~~--------------------------------~~~~~~-~~~~~~~~~~~~~~ 220 (352)
++++.|.+|.+|.+|..+|.++.. .. +..+.+ ......+...+++.
T Consensus 202 D~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~ 281 (433)
T PRK08134 202 DLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMN 281 (433)
T ss_pred CEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHH
Confidence 599999999997666556655432 10 000000 11122233455554
Q ss_pred HHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 018665 221 QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 221 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
...+...+ +.+..+.++..++...+.+.|++.|.+.
T Consensus 282 A~l~~~gL-------~tl~~R~~~~~~nA~~la~~L~~~p~V~ 317 (433)
T PRK08134 282 AWQLLQGI-------ETLPLRMERHVANTRKVVAFLASHPAVA 317 (433)
T ss_pred HHHHhcCC-------CcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 44444443 3356666667777888888888776653
No 245
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.90 E-value=7e-21 Score=173.58 Aligned_cols=294 Identities=17% Similarity=0.162 Sum_probs=198.8
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|...+...+++ +.++++++ .++.++++|+++|+..++.++ .++||+|+++.++|..+...++..|.
T Consensus 25 ~~~g~~~~~le------~~la~~~g-------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~ 91 (380)
T TIGR03588 25 LTQGPTVPAFE------EALAEYVG-------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGA 91 (380)
T ss_pred ccCChhHHHHH------HHHHHHHC-------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCC
Confidence 33445566777 99999986 234566778999999999998 78999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-c
Q 018665 83 TPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-Y 157 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~ 157 (352)
+++.+++++ .++.+|++++++.++ +++++|+++ |++|...+ +++|.++|+++ |+++|+|++++... +
T Consensus 92 ~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~-~~~lI~D~a~a~g~~~ 163 (380)
T TIGR03588 92 KVDFVDIDP-DTGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVD---MQAIAALAKKH-GLKIIEDASHALGAEY 163 (380)
T ss_pred EEEEEecCC-CcCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCC---HHHHHHHHHHc-CCEEEEECCCcccCcc
Confidence 999999964 346689999999998 678888754 46898888 89999999999 99999999998632 2
Q ss_pred CCCCccccccCCCCCCceEEEeccc--cccccccceeEEEEc-ChhHHHHHHhhhhccc---------------------
Q 018665 158 APATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAG-PKHFVAACNKIQSQFT--------------------- 213 (352)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~--------------------- 213 (352)
.+. .+... ..-++.+.|++ |.++ .| ..|+++. ++++.++++.......
T Consensus 164 ~~~---~~g~~---~~~d~~~~S~~~~K~~~-~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 235 (380)
T TIGR03588 164 GGK---PVGNC---RYADATVFSFHPVKIIT-TA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQE 235 (380)
T ss_pred CCE---eCCCc---cccceEEEecCCCCccc-cc-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeec
Confidence 221 11110 01237777776 8886 33 4566654 5677776654322110
Q ss_pred ----cCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC----CceE-EEeecCCccCCc
Q 018665 214 ----SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFY-LFIDFSTYYGSE 284 (352)
Q Consensus 214 ----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~~-~~~~~~~~~~~~ 284 (352)
..++.+........ -..+++..++-+++.+++.+.|.+++++....+. ...+ ..+.++...
T Consensus 236 ~g~n~~m~~l~aa~g~~q-------L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 305 (380)
T TIGR03588 236 LGFNYRMTDIQAALGLSQ-------LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEF--- 305 (380)
T ss_pred cccccCccHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcC---
Confidence 01111111111111 2335666777788888999999988776654331 1222 223332100
Q ss_pred ccCCCCCCChHHHHHHHHHccCEEeccCCCC-----------C---CC-------CeEEEEeec--CHHHHHHHHHHHHH
Q 018665 285 AEGFGKIENSESLCRYLLDKAQVALVPGDAF-----------G---DD-------TCIRISYAA--SLTTLQAAVERIKK 341 (352)
Q Consensus 285 ~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~-----------~---~~-------~~iRi~~~~--~~~~l~~~~~~l~~ 341 (352)
+ .+.+++.+.|.++ ||.+...... . .+ ..+++.++. +++|+++.++.|++
T Consensus 306 --~----~~r~~l~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 306 --G----CTRKEVFEALRAA-GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred --C----CCHHHHHHHHHHC-CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 0 1678999998765 8877643211 0 01 468888776 89999999999988
Q ss_pred HH
Q 018665 342 GL 343 (352)
Q Consensus 342 ~~ 343 (352)
++
T Consensus 379 ~~ 380 (380)
T TIGR03588 379 VL 380 (380)
T ss_pred hC
Confidence 64
No 246
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=8.4e-21 Score=175.47 Aligned_cols=304 Identities=12% Similarity=0.100 Sum_probs=193.4
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-cC-------------Ce
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD-------------AT 83 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~g-------------~~ 83 (352)
..+|+.+. ..+. ...+.++++++|++|++.+++... ...++|+....+|++....... .+ ..
T Consensus 102 ~~la~~l~~~~p~-~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~ 180 (443)
T PRK06058 102 VAVAEQLNRLTPG-DHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPE 180 (443)
T ss_pred HHHHHHHHHhCCC-CCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCC
Confidence 55556554 2211 112589999999999999998532 2347899999999887743322 11 11
Q ss_pred EEEecccCCCCc----cc--------CHHHHHhhcc-CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEec
Q 018665 84 PVILPTRISENF----LL--------DPKVLESKLT-EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 84 v~~i~~~~~~~~----~~--------d~~~l~~~l~-~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD 149 (352)
+..++.+...+. .. ..+.+++.+. ++++++++...+...|.. .|.+.+++|.++|++| |+++|.|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~-gillI~D 259 (443)
T PRK06058 181 VYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCREN-GVVFIAD 259 (443)
T ss_pred ceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEe
Confidence 222222111110 00 1233444443 466677665555556665 4688999999999999 9999999
Q ss_pred ccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhc
Q 018665 150 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALG 229 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 229 (352)
|++.++.++|... ........ ++ +.+++|.+| +|+++|++++++++++.+.......+++.|+++++++.++++
T Consensus 260 EV~tGfgRtG~~f-a~~~~gv~-PD---iv~~gK~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 333 (443)
T PRK06058 260 EVQTGFARTGAWF-ACEHEGIV-PD---LITTAKGIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIE 333 (443)
T ss_pred ccccCCCcChhhh-HHHhcCCC-CC---EEEEccccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999987766422 11111111 12 445689999 899999999999998888665566788899999999999997
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhccc----CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHcc
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 305 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (352)
.-. -+++.++.+++.+++.+.|+++ +.+.-+.+.+ .++.+.+...... ... ......+.+.+.++
T Consensus 334 ~~~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G-~~~~i~~~~~~~~-~~~---~~~~~~l~~~~~~~- 402 (443)
T PRK06058 334 TIE-----EDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRG-AMIAIELVKPGTT-EPD---AELTKALAAAAHAA- 402 (443)
T ss_pred HHH-----HcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccc-eEEEEEEecCCCC-CCc---HHHHHHHHHHHHHC-
Confidence 511 1244555556666666666553 2222234444 4444554221000 000 00245677777765
Q ss_pred CEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 306 QVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 306 gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
|+.+.+++.+ .+++|+.++. +++++++++++|++++++
T Consensus 403 Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 403 GVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred CeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 9999886544 4689998766 999999999999999875
No 247
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=1.4e-20 Score=169.32 Aligned_cols=210 Identities=11% Similarity=0.079 Sum_probs=164.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++- ..+..++++||++|+..++.+++++||+|+++...|.++...+ +..|+++.+++.
T Consensus 69 ~~la~LE-------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~------- 134 (395)
T PRK08114 69 EAMCELE-------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP------- 134 (395)
T ss_pred HHHHHHh-------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-------
Confidence 8888764 4678888999999999999999999999999999998877554 678999999874
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
.|.+++++++++++++|++.+|+||+|.+.| +++|+++|+++ ||+++++|++++. +.. .. +..++-+
T Consensus 135 ~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~----p~~----~~-pl~~GaD 202 (395)
T PRK08114 135 LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAA----GVL----FK-ALDFGID 202 (395)
T ss_pred CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcc----ccc----cC-HHHcCCc
Confidence 3778999999999999999999999999999 99999999997 1499999999864 111 11 1124566
Q ss_pred EEEeccccccccc-cceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMT-GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 176 i~~~s~sK~~g~~-g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
+++.|.+|.++.+ ....|.++.+++..+.+.......+...+++....+.+.+++ +.-+.++..++...+.+
T Consensus 203 ivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-------L~lR~~~~~~na~~va~ 275 (395)
T PRK08114 203 ISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRT-------LGVRLRQHEESSLKVAE 275 (395)
T ss_pred EEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc-------HHHHHHHHHHHHHHHHH
Confidence 9999999988534 367888888887777666555555666777777766666654 55556677778888888
Q ss_pred HhcccCCce
Q 018665 255 SFGELEGVK 263 (352)
Q Consensus 255 ~l~~~~g~~ 263 (352)
.|++.|.+.
T Consensus 276 ~L~~hp~V~ 284 (395)
T PRK08114 276 WLAEHPEVA 284 (395)
T ss_pred HHHcCCCEe
Confidence 998877654
No 248
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.90 E-value=1.5e-21 Score=192.26 Aligned_cols=300 Identities=15% Similarity=0.113 Sum_probs=205.2
Q ss_pred HHHHHHHHhcCCCCCCC--cEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCC--
Q 018665 21 QQFVINLKENGLSYTPD--QILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRIS-- 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~-- 92 (352)
+.+|++++ ++++ +|++|+|+|++++.++.++ .++||+|++..-.|.+... .++..|+++..++++.+
T Consensus 85 ~~ia~~lg-----a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~ 159 (805)
T PLN02724 85 QQVLEYFN-----APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAAN 159 (805)
T ss_pred HHHHHHhC-----CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccc
Confidence 88888887 5454 5899999999999999887 6788999998777776553 34567999999988622
Q ss_pred ----CCcccCH--HHHHhhc----------cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh-----CCCEEEEeccc
Q 018665 93 ----ENFLLDP--KVLESKL----------TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-----HPRLLVLSDEI 151 (352)
Q Consensus 93 ----~~~~~d~--~~l~~~l----------~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~-----~~~~~livD~~ 151 (352)
....+++ +.|++.+ .++++++++++.+|.+|..+|.+.++++.+.++. . ++++++|.+
T Consensus 160 ~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g-~~~v~vDaa 238 (805)
T PLN02724 160 QPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSG-RWMVLLDAA 238 (805)
T ss_pred cccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCc-ceEEEeehh
Confidence 1112332 5566653 1356799999999999999994433333332211 2 368999999
Q ss_pred ccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh-----------------------
Q 018665 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI----------------------- 208 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~----------------------- 208 (352)
++. ++.+..+..+ +.++++.|.+|++| +..++|++++++++++.+...
T Consensus 239 Q~~----g~~piDv~~~----~~Dfl~~S~HK~~G-gP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~ 309 (805)
T PLN02724 239 KGC----GTSPPDLSRY----PADFVVVSFYKIFG-YPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERV 309 (805)
T ss_pred hhc----CCCCCChhhc----CCCEEEEecceecc-CCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccH
Confidence 875 4444444433 34599999999997 334689999988877665421
Q ss_pred -hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccC------CceecCCC--------CceEE
Q 018665 209 -QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE------GVKMSEPQ--------GAFYL 273 (352)
Q Consensus 209 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------g~~~~~~~--------~g~~~ 273 (352)
..+..+++|.....++.++++.. ..-.++++.++.+++.+++.+.|++++ ++.++.+. .+..+
T Consensus 310 ~~rfE~GT~n~~~i~~l~aal~~l--~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~iv 387 (805)
T PLN02724 310 EQRFEDGTISFLSIAALRHGFKLL--NRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIV 387 (805)
T ss_pred HHHhcCCCcchhHHHHHHHHHHHH--HHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEE
Confidence 11223467777777777777651 122467778888999999999998875 47776432 23334
Q ss_pred EeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC-----------------------------------C
Q 018665 274 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-----------------------------------D 318 (352)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-----------------------------------~ 318 (352)
.+.+.+..+. .....++ ..|+..+||.++.|..|.. .
T Consensus 388 sFnv~~~~~~-------~v~~~~v-~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~ 459 (805)
T PLN02724 388 TFNLKRADGS-------WVGHREV-EKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPT 459 (805)
T ss_pred EEEEEcCCCC-------EeCHHHH-HHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCccc
Confidence 4454432110 0023334 4566667999999987751 2
Q ss_pred CeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 319 TCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 319 ~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
+.+|+|++. +.+|++++++.|++..-.
T Consensus 460 G~vRvS~g~ynt~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 460 GAVRVSFGYMSTFEDCQKFIDFIISSFVS 488 (805)
T ss_pred ceEEEEcCccCCHHHHHHHHHHHHHHhhc
Confidence 789999998 999999999999997744
No 249
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.89 E-value=9.2e-22 Score=172.15 Aligned_cols=297 Identities=18% Similarity=0.170 Sum_probs=195.9
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC-CCC----EEEecCCCCCChH---HHHHhcC
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS-PGD----EVIIPAPFWVSYP---EMARIAD 81 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~~~----~vl~~~~~~~~~~---~~~~~~g 81 (352)
.++.| +.+|++++ .++.+|+||+|+|++++.+++.... .++ +|++.+..|.... ..++..|
T Consensus 87 ~E~aR------~~VAklIn-----Ad~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g 155 (428)
T KOG1549|consen 87 VEAAR------EQVAKLIN-----ADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEG 155 (428)
T ss_pred HHHHH------HHHHHHhC-----CCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcC
Confidence 67788 99999998 8888899999999999999998632 334 8888888887766 4666789
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
++|.++|++ .++.+|.+++++.++++++++.|...+|.+|+++| +++|.++|++. ++.+++|.+|+- |+.
T Consensus 156 ~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~-~v~v~~DaAQav----G~i 225 (428)
T KOG1549|consen 156 LEVTYLPVE--DSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP---VKEIVKICREE-GVQVHVDAAQAV----GKI 225 (428)
T ss_pred eEEEEeccC--ccccccHHHHHHhcCCCceEEEEEecccCcccccc---HHHHHHHhCcC-CcEEEeehhhhc----CCc
Confidence 999999998 44568999999999999999999999999999999 99999999999 999999999986 555
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChh--HHH---HH---HhhhhccccCCChHHHHHHHHHhcccCC
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVA---AC---NKIQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~--~~~---~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
+..+..+.. +++..|.||++|.+| +|+++++++ .+. .+ ......+..+...+.+..+-.+.+.
T Consensus 226 ~vDV~eln~----D~~s~s~HK~ygp~~--iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~--- 296 (428)
T KOG1549|consen 226 PVDVQELNA----DFLSISAHKIYGPPG--IGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEF--- 296 (428)
T ss_pred cccHHHcCc----hheeeecccccCCCc--ceEEEEccCCCcccccCcccCCccccccccCCcCchhhhhhHHHHHH---
Confidence 555555544 388999999999777 898888751 111 00 1112233445555555555555543
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcc-cCCceecCCCCc---eEEEeecCCccCCcccCCCCCCChHHHHHHHHH---ccC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGA---FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD---KAQ 306 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~g 306 (352)
...........+++....+...+.. .+.+....+... -.+-+.++-. ....+...+.+ +.|
T Consensus 297 ~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~------------~g~~~~~~~~~~~l~s~ 364 (428)
T KOG1549|consen 297 VNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYV------------EGESLLMDLKDVALSSG 364 (428)
T ss_pred HHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccccccceeeecccc------------cCcchhhhhhhhhhccc
Confidence 1122222222333344444444432 333333322111 1122233300 11111111110 111
Q ss_pred EEeccCC-------------CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 307 VALVPGD-------------AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 307 i~i~~g~-------------~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
....... .+-...++||+++. +++|++++.+.+++.+..++.
T Consensus 365 ~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 365 SACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred chhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence 1111110 00013589999998 889999999999999987765
No 250
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.89 E-value=2.6e-22 Score=176.25 Aligned_cols=226 Identities=18% Similarity=0.195 Sum_probs=160.6
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
|+.-..+++ +.+|++++ ..+.+++++|+++++..++.+++++||+|+++.++|.++...+...|.+++
T Consensus 57 ~~g~i~~~~------~~~A~~~g------a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~ 124 (294)
T cd00615 57 PTGPIKEAQ------ELAARAFG------AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPV 124 (294)
T ss_pred CChHHHHHH------HHHHHHhC------CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEE
Confidence 344456777 99999986 345566699999999999999999999999999999999999999999999
Q ss_pred EecccCCCC----cccCHHHHHhhcc--CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc-ccC
Q 018665 86 ILPTRISEN----FLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI-IYA 158 (352)
Q Consensus 86 ~i~~~~~~~----~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~-~~~ 158 (352)
+++.+.+.+ ..+|+++++++++ ++++++++++| |++|.+.| +++|+++|+++ |+++|+||+|+.. .+.
T Consensus 125 ~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~-g~~livDeA~~~~~~~~ 199 (294)
T cd00615 125 YLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHR-GLPVLVDEAHGAHFRFH 199 (294)
T ss_pred EecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhc-CCeEEEECcchhhhccC
Confidence 998764433 3689999999996 46889999988 68999999 99999999999 9999999998742 222
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEE-EcChhH--HHHHHhh-hhccccCCChHHHHHHHHHhcccCCC
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI-AGPKHF--VAACNKI-QSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l-~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
+..+.+.. ..+.++++.|++|++ +|++.|++ ..+.+. .+++... ....+.+++.....++..++.. .
T Consensus 200 ~~~~~~~~----~~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~---~ 270 (294)
T cd00615 200 PILPSSAA----MAGADIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAM---M 270 (294)
T ss_pred cccCcchh----hcCCcEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHH---H
Confidence 22111111 136679999999987 56655444 344331 2233222 2333456666666666666653 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFG 257 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~ 257 (352)
....++..++..++.+.+++.|+
T Consensus 271 ~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 271 ALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHh
Confidence 22233445555556666666554
No 251
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=4.7e-21 Score=177.18 Aligned_cols=292 Identities=15% Similarity=0.139 Sum_probs=189.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHH-HHhcC-------------CeEEEecccCCCC--cc-
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEM-ARIAD-------------ATPVILPTRISEN--FL- 96 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~-~~~~g-------------~~v~~i~~~~~~~--~~- 96 (352)
.+.++++++|++|++.+++... ....+|+.....|++.... +...+ ..+..+|.+.... ..
T Consensus 103 ~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (433)
T PRK08117 103 LDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGE 182 (433)
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccC
Confidence 4689999999999999998632 2335788777777765432 21111 1123333331100 00
Q ss_pred -------cCHHHHHhhcc-----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 97 -------LDPKVLESKLT-----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 97 -------~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
.+++.+++.++ +++.+|++.......|.. .+.+++++|.++|++| |+++|+||++.++..+|....
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~gr~G~~~~ 261 (433)
T PRK08117 183 DPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH-GILLIFDEVQTGFGRTGEWFA 261 (433)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhccCccccchh
Confidence 14555666543 356777777777777876 5688999999999999 999999999999877664221
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+ ... +....+.+++|.+| +|+++|++++++++++.+.......+++.|++.++++.++++... .+.+.+
T Consensus 262 ~-~~~----gv~pDi~t~sK~lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~-----~~~l~~ 330 (433)
T PRK08117 262 A-QTF----GVVPDIMTIAKGIA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIK-----EEKLLD 330 (433)
T ss_pred H-hhc----CCCCCEeehhhhcc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH-----hccHHH
Confidence 1 111 22233679999999 899999999999998887654555567889999999999998521 123444
Q ss_pred HHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCe
Q 018665 244 AFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 320 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~ 320 (352)
+++++.+++.+.|+++ ..+.......|.++.+++.+... ... ......+.+.+.++ ||.+.+... ..++
T Consensus 331 ~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~-~~~----~~~~~~~~~~l~~~-Gv~~~~~g~--~~~~ 402 (433)
T PRK08117 331 NANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDG-EPD----GDAVEKILDKCLEK-GLLFYLCGN--AGNV 402 (433)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCC-Ccc----hHHHHHHHHHHHHC-CCEEeecCC--CCCE
Confidence 4555555555555443 12212223445666666643210 000 00245677777765 888866321 2579
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 321 IRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 321 iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+|++++. ++++|++++++|.++++++.
T Consensus 403 lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 403 LRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 9999754 99999999999999998764
No 252
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=6.6e-21 Score=175.63 Aligned_cols=284 Identities=15% Similarity=0.091 Sum_probs=186.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChHHHHHh-cC------------CeEEEecccCCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYPEMARI-AD------------ATPVILPTRISEN 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~~~~~~-~g------------~~v~~i~~~~~~~ 94 (352)
.+.++++++|++|++.+++... ....+|+.....|++....... .+ ..+..++.+..+.
T Consensus 102 ~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 181 (423)
T PRK05964 102 LDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGY 181 (423)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchh
Confidence 4689999999999999998642 1235788888888876543322 11 1223344432111
Q ss_pred cccCHHHHHhhcc---CCeeEEEEcC-CCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCC
Q 018665 95 FLLDPKVLESKLT---EKSRLLILCS-PSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 169 (352)
Q Consensus 95 ~~~d~~~l~~~l~---~~~~~i~i~~-p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~ 169 (352)
...+++.+++.++ +++.+|++.. .++.+|... |.+++++|.++|++| |+++|+||++.++..+|... .....
T Consensus 182 ~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~G~~~-a~~~~- 258 (423)
T PRK05964 182 EQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH-GVLLIFDEIATGFGRTGTLF-ACEQA- 258 (423)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCcchh-HHHhc-
Confidence 1123778888774 4666777766 477777665 788999999999999 99999999999886665321 11111
Q ss_pred CCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh------hhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
+...-+.+++|.++ +| +++|++++++++.+.+... ....+++.|++...++.++++.-. .+++.
T Consensus 259 ---~v~pDi~~~~K~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~-~~~~~---- 329 (423)
T PRK05964 259 ---GVSPDIMCLSKGLT-GGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFE-DEPVL---- 329 (423)
T ss_pred ---CCCCCeeeeehhhh-cCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHH-hcCHH----
Confidence 11122557889997 55 8999999999998887532 123445689999999988887411 12333
Q ss_pred HHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 243 KAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
++.+++-+++.+.|+++ +.+.-+. ..|.++.+.+.+... . .....+.+.|.++ ||.+.+. .+
T Consensus 330 ~~~~~~g~~l~~~l~~l~~~~~i~~vr-g~Gl~~~i~l~~~~~----~----~~~~~l~~~l~~~-Gv~v~~~-----~~ 394 (423)
T PRK05964 330 ERVAALSAGLAEGLEPFRDLPGVADVR-VLGAIGAVELDRPVL----E----RDGPALRAFALER-GVLLRPL-----GN 394 (423)
T ss_pred HHHHHHHHHHHHHHHhhccCCCeEEee-cccEEEEEEeccCcc----h----hHHHHHHHHHHHC-CeEEEec-----CC
Confidence 44444444555544433 3332222 345556666653210 0 0256788888865 9998763 35
Q ss_pred eEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 320 CIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 320 ~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+|++++. +++|+++++++|+++++++
T Consensus 395 ~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 395 TIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 89999885 9999999999999999763
No 253
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1.7e-20 Score=172.27 Aligned_cols=209 Identities=13% Similarity=0.128 Sum_probs=152.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++.+ .+..++++++++|+..++.+++++||+|+++.+.|.+... .++..|.+++.++..
T Consensus 70 ~~lA~l~g-------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~------ 136 (427)
T PRK05994 70 ERVAALEG-------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD------ 136 (427)
T ss_pred HHHHHHhC-------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC------
Confidence 88888874 4457889999999999999999999999999999986543 467789999998752
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|++.+++++++++++|++++|+||+|.+.| +++|+++|+++ |+++|+|+++... ....++ ..+-++
T Consensus 137 -d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~-gi~livD~a~a~~----~~~~pl-----~~gaDi 202 (427)
T PRK05994 137 -DPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRA-GLPLIVDNTLASP----YLIRPI-----EHGADI 202 (427)
T ss_pred -CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCcccc----ccCCcc-----ccCCcE
Confidence 789999999989999999999999999999 89999999999 9999999998641 111121 134559
Q ss_pred EEeccccccccccceeEEEEcC-hh-----------------------HHHHHH----------hhhhccccCCChHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGP-KH-----------------------FVAACN----------KIQSQFTSGASSISQK 222 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~-~~-----------------------~~~~~~----------~~~~~~~~~~~~~~~~ 222 (352)
++.|++|.+|.+|-.+|.+++. .. +.+.+. ......+...+++...
T Consensus 203 vv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~ 282 (427)
T PRK05994 203 VVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAF 282 (427)
T ss_pred EEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHH
Confidence 9999999997555455654432 11 111110 0112223345555554
Q ss_pred HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 018665 223 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
.+...+ +.+..+.++..++...+.+.|++.|++.
T Consensus 283 l~~~~l-------~tL~~r~~~~~~~a~~la~~L~~~p~v~ 316 (427)
T PRK05994 283 LILTGI-------ETLPLRMQRHSDNALAVAEWLKGHPKVS 316 (427)
T ss_pred HHHcCc-------ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 444444 3456666677778888888888877654
No 254
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1.4e-20 Score=172.16 Aligned_cols=210 Identities=10% Similarity=0.089 Sum_probs=154.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++.+ .+..+++++|++|+..++.+++++||+|+++...|.+.... ++..|++++.++ + .
T Consensus 76 ~~lA~l~g-------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d--~--- 142 (436)
T PRK07812 76 QRIAALEG-------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D--P--- 142 (436)
T ss_pred HHHHHHhC-------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C--C---
Confidence 88888874 45678888999999999999999999999999988876643 455788888885 2 1
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.|++++++++++++++|++++|+||+|.+.| +++|.++|+++ |+++|+|++++. +....++ .++-++
T Consensus 143 ~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~-gi~liVD~t~a~----~~~~~pl-----~~GaDi 209 (436)
T PRK07812 143 DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEA-GVPLIVDNTIAT----PYLIRPL-----EHGADI 209 (436)
T ss_pred CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcc----cccCCch-----hcCCCE
Confidence 2899999999999999999999999999999 99999999999 999999999764 1111121 134558
Q ss_pred EEeccccccccccceeEEEEcChhH-------------------------------HHHHH-hhhhccccCCChHHHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHF-------------------------------VAACN-KIQSQFTSGASSISQKAG 224 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~-------------------------------~~~~~-~~~~~~~~~~~~~~~~~~ 224 (352)
++.|++|.+|..|--+|.+++.... +.+.. ......+...+++....+
T Consensus 210 vv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~ 289 (436)
T PRK07812 210 VVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLI 289 (436)
T ss_pred EEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 8999999997566556666553210 10111 122233455666655544
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
...++ .+..+.++..++...+.+.|++.|++.
T Consensus 290 ~rgl~-------tL~~R~~~~~~nA~~la~~L~~~p~v~ 321 (436)
T PRK07812 290 AQGLE-------TLSLRIERHVANAQRVAEFLEARDEVA 321 (436)
T ss_pred hcCcC-------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 44443 466667777888888999999887753
No 255
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.89 E-value=2.8e-21 Score=175.55 Aligned_cols=282 Identities=11% Similarity=0.030 Sum_probs=195.0
Q ss_pred HHHHHHHHhcCCCCC-CCcEEEeC-ChHHHHHHHHHHhcCC-CCEEEecCCCCCCh-HH-HHHhcCC-eEEEecccCCCC
Q 018665 21 QQFVINLKENGLSYT-PDQILVSN-GAKQSILQAVLAVCSP-GDEVIIPAPFWVSY-PE-MARIADA-TPVILPTRISEN 94 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~~~i~~~~-g~~~a~~~~~~~l~~~-~~~vl~~~~~~~~~-~~-~~~~~g~-~v~~i~~~~~~~ 94 (352)
+.++++++ .+ +++|++++ |+|++++.++.+++++ ++.|+. ...|..- .. ..+..|. +++.++.+ .+
T Consensus 55 ~~l~~l~~-----~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g 126 (378)
T PRK03080 55 EGTRELLS-----LPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YG 126 (378)
T ss_pred HHHHHHhC-----CCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CC
Confidence 77777775 43 35788875 9999999999998874 344444 4444432 22 2366799 99999876 33
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
..+|+++++. ++.|.+++..|.||..+| +++|++ +++ |+++++|.+++. |..+..+.. -
T Consensus 127 ~~~d~~~i~~-----~~~V~~~h~~t~tG~~~p---i~~I~~--~~~-g~~~vVDa~qs~----G~~pidv~~------i 185 (378)
T PRK03080 127 SLPDLSAVDF-----DRDVVFTWNGTTTGVRVP---VARWIG--ADR-EGLTICDATSAA----FALPLDWSK------L 185 (378)
T ss_pred CCCCHhhcCC-----CCCEEEEecCCccceecc---chhhcc--ccC-CCeEEEeccccc----ccCCCCHHH------C
Confidence 3467776432 456888999999999999 888888 788 999999999886 333333332 2
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhhh--------------------h--c-cccCCChHHHHHHHHHhccc
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ--------------------S--Q-FTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~--------------------~--~-~~~~~~~~~~~~~~~~l~~~ 231 (352)
+++++|.+|+++ +..++|+++.+++.++++.... . . +..+++.....++.++++.-
T Consensus 186 D~~~~s~~K~l~-~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l 264 (378)
T PRK03080 186 DVYTFSWQKVLG-GEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWA 264 (378)
T ss_pred cEEEEehhhhCC-CCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHH
Confidence 489999999996 4356899999999887765321 0 0 01224444454445566541
Q ss_pred CCChH-HHHHHHHHHHHHHHHHHHHhcccCCceecCC----CCceEEEeecCC---ccCCcccCCCCCCChHHHHHHHHH
Q 018665 232 YAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFST---YYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 232 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~----~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
... .++++.++.+++.+++++.|++++++.++.+ +++..+.+.+++ . ...++...|.+
T Consensus 265 --~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~------------~~~~~~~~l~~ 330 (378)
T PRK03080 265 --NSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAA------------VDAAAVAKLLR 330 (378)
T ss_pred --HHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHH------------HHHHHHHHHHH
Confidence 123 5788888999999999999998866666531 233345566664 1 23356667776
Q ss_pred ccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 304 KAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 304 ~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+ |+.+..|......+.+|+|++. +++|++++++.|++++++++
T Consensus 331 ~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 331 E-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred c-CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 6 7888776533235789999987 88999999999999988765
No 256
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.89 E-value=2.1e-20 Score=172.06 Aligned_cols=286 Identities=11% Similarity=0.099 Sum_probs=187.9
Q ss_pred cEEE-eCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHH-HHHhcC------------CeEEEecccCCCCc-ccCHH
Q 018665 38 QILV-SNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRISENF-LLDPK 100 (352)
Q Consensus 38 ~i~~-~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~-~~~~~g------------~~v~~i~~~~~~~~-~~d~~ 100 (352)
.+++ ++||++|++.+++... ....+|+.....|++... .+...+ ..+..+|.+..... .-|++
T Consensus 104 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 183 (425)
T PRK09264 104 KVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLA 183 (425)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHH
Confidence 5655 5899999999998753 234678888888887653 222211 12344444321100 12677
Q ss_pred HHHhhcc------CCeeEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 101 VLESKLT------EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 101 ~l~~~l~------~~~~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
.+++.+. +++.+|++...+...|. ++|.+.+++|.++|++| |+++|+||++.+++..|.. .........++
T Consensus 184 ~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GrtG~~-~~~~~~~v~PD 261 (425)
T PRK09264 184 YLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKH-DILLIVDDIQAGCGRTGTF-FSFERAGITPD 261 (425)
T ss_pred HHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEechhhCCccccHH-HHHhhcCCCCC
Confidence 7887774 24667777777777786 56888999999999999 9999999999988766632 11121211122
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
+.+++|.+|.+|+++|++++++++ ..+.......+++.|+++..++.++++.... + .++.++++++.+++.
T Consensus 262 ----i~t~~K~l~~~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~-~---~~l~~~~~~~g~~l~ 332 (425)
T PRK09264 262 ----IVTLSKSISGYGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS-D---DAFEKEVKAKGELVR 332 (425)
T ss_pred ----EEEeccccCCCccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh-h---hHHHHHHHHHHHHHH
Confidence 457789998449999999999886 4443333445677888888877777742111 1 134445555555555
Q ss_pred HHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--
Q 018665 254 KSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-- 327 (352)
Q Consensus 254 ~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-- 327 (352)
+.|++ .|.+.......|.++++.+++.. ....+.+.+.++ |+.+.+...+ ...+|++++.
T Consensus 333 ~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~-----------~~~~l~~~~~~~-Gv~~~~~~~~--~~~lr~~p~l~~ 398 (425)
T PRK09264 333 ERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGE-----------LAGKIAAEAFEN-GLIIETSGPE--DEVVKLLPPLTI 398 (425)
T ss_pred HHHHHHHHhCCCceecceecccEEEEEecChH-----------HHHHHHHHHHHC-CCEEeccCCC--CCEEEEeCCCCC
Confidence 55543 33232222345777888886431 466788888876 8998775322 4788998874
Q ss_pred CHHHHHHHHHHHHHHHhhhCC
Q 018665 328 SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+++++++++++|+++++++..
T Consensus 399 t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 399 DEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999987644
No 257
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=1.9e-20 Score=170.11 Aligned_cols=288 Identities=15% Similarity=0.071 Sum_probs=193.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCC-------------------------------CCEEEecCCCCCChHHH-----H
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSP-------------------------------GDEVIIPAPFWVSYPEM-----A 77 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~-------------------------------~~~vl~~~~~~~~~~~~-----~ 77 (352)
.+..+|-..+| +.|+..++.+++++ ||+|+..+..+.++... +
T Consensus 110 a~~anvqp~Sg-~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~ 188 (493)
T PRK13580 110 AEHAYVQPHSG-ADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNI 188 (493)
T ss_pred CCcccccCCCc-HHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccch
Confidence 44456665555 46777788888865 79999877666544321 2
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
.....++..++++. .+..+|++++++.+++.++.++++..+|- |...| +++|.++|+++ |+++++|++|+....
T Consensus 189 ~~~~~~~~~y~vd~-~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~d---l~~i~eia~~~-gA~L~VD~AH~~Gli 262 (493)
T PRK13580 189 SGKMFHQRSYGVDP-DTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVN---FAKLREIADEV-GAVLMVDMAHFAGLV 262 (493)
T ss_pred hhheeeeEecccCc-ccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcC---HHHHHHHHHHc-CCEEEEECchhhcee
Confidence 22235666777764 33469999999999988888888888776 44778 99999999999 999999999996544
Q ss_pred CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHH
Q 018665 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
.+......... ..+.+++++|++|++ .|.+.|++++++++++.+.........++.++..++.+.++... ....
T Consensus 263 gg~~~~~~~~~--~~~~D~vtgT~hKaL--~GP~GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~--~~~e 336 (493)
T PRK13580 263 AGKVFTGDEDP--VPHADIVTTTTHKTL--RGPRGGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEA--RTPE 336 (493)
T ss_pred ccccchhhcCC--CCCCcEEEeCChhhc--cCCCeEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHH--hCcc
Confidence 33221100000 123458999999998 23446999999999888854432222234444444444444431 1122
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecC-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
..+.++++.++.++|.+.|++. |+.++. ...+.++++.+++.. .+...+.+.|.+. ||.+.+-....
T Consensus 337 f~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~----------~~g~~a~~~L~e~-GI~vn~i~~Pt 404 (493)
T PRK13580 337 FQKYAQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG----------LTGRQAESALLDA-GIVTNRNSIPS 404 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH----------HHHHHHHHHHHHC-CeEEccccCCC
Confidence 3567888999999999999987 888763 244566777876531 0233565666655 99987654333
Q ss_pred C------CCeEEEEeec------CHHHHHHHHHHHHHHHhhh
Q 018665 317 D------DTCIRISYAA------SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 317 ~------~~~iRi~~~~------~~~~l~~~~~~l~~~~~~~ 346 (352)
. +..+||++.. +++|++++++.|.++++..
T Consensus 405 vp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 405 DPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred CCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 2 4579999876 5799999999999988754
No 258
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=1.6e-20 Score=174.32 Aligned_cols=291 Identities=11% Similarity=0.052 Sum_probs=196.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEe---CChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh----------cCCeEEEe
Q 018665 21 QQFVINLKENGLSYTPDQILVS---NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----------ADATPVIL 87 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~---~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~----------~g~~v~~i 87 (352)
+.++++++ .+++++.++ +|+++++..++.+++++||+|++....|.++...+.. .+.++..+
T Consensus 87 ~~~a~lf~-----a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~ 161 (452)
T PTZ00094 87 KRALEAFG-----LDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPY 161 (452)
T ss_pred HHHHHHhC-----CCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeec
Confidence 57777776 566777677 7899999999999999999999988888776544321 12334455
Q ss_pred cccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 88 PTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 88 ~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
+++. ++.+|+++|++.+++ +++++++. ++.+|...| +++|.++|+++ |+++++|++|+...... ...
T Consensus 162 ~~~~--~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~-ga~l~vDaaq~~G~i~~----~~~ 229 (452)
T PTZ00094 162 QVNE--KGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDID---YKRFREICDSV-GAYLMADIAHTSGLVAA----GVL 229 (452)
T ss_pred ccCC--CCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHc-CCEEEEeccchhccccC----CCC
Confidence 5543 356999999999954 56666653 345899999 89999999999 99999999998633222 111
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh-----hccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..+. .+.+++++|.+|+++ |.+.|+++.++++.+.+.... ..+..+++....+++.++++.. .....++.
T Consensus 230 ~~~~-~~~D~l~~S~hK~l~--GP~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~--~~~~~~~~ 304 (452)
T PTZ00094 230 PSPF-PYADVVTTTTHKSLR--GPRSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEV--QSPEWKEY 304 (452)
T ss_pred CCCC-CCCcEEEcCCccCCC--CCCceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHH--hChhHHHH
Confidence 1111 134589999999883 233488777766544332211 1122356777777777777651 12345677
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCC-ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec-cCCCCC---
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQG-AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV-PGDAFG--- 316 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~-~g~~~~--- 316 (352)
.+++.++.+++.+.|++. |+.+..+.. .....+.+.... .+...+...|. +.||.+. ++-.+.
T Consensus 305 ~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~----------~~~~~~~~~L~-~~gI~vs~~~~p~~~~~ 372 (452)
T PTZ00094 305 AKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPFG----------ITGSKMEKLLD-AVNISVNKNTIPGDKSA 372 (452)
T ss_pred HHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcCC----------CCHHHHHHHHH-HCCcEEecccCCCCCcC
Confidence 788999999999999876 877764321 222333443210 15677777775 4599984 332221
Q ss_pred -CCCeEEEEeec--C----HHHHHHHHHHHHHHHhh
Q 018665 317 -DDTCIRISYAA--S----LTTLQAAVERIKKGLLT 345 (352)
Q Consensus 317 -~~~~iRi~~~~--~----~~~l~~~~~~l~~~~~~ 345 (352)
.++++|++++. + ++|++++++.|++++..
T Consensus 373 ~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 373 LNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred CCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 24789999976 3 89999999999999875
No 259
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=2.2e-20 Score=171.33 Aligned_cols=290 Identities=14% Similarity=0.042 Sum_probs=185.2
Q ss_pred HHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCCh-HHHHHh--cCCeE--EEecccCCCCcc
Q 018665 22 QFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY-PEMARI--ADATP--VILPTRISENFL 96 (352)
Q Consensus 22 ~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~-~~~~~~--~g~~v--~~i~~~~~~~~~ 96 (352)
.++++++ ....++.++||+.|+..++.+++++||+|+++..+|.+. ...++. .+... ..++.+. .++.
T Consensus 82 ~la~l~g------~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~ 154 (416)
T PRK13034 82 RAKQLFG------CDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR-LTGL 154 (416)
T ss_pred HHHHHhC------CCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc-ccCC
Confidence 8888885 333335568999999999999999999999999999773 222221 12222 2444432 2345
Q ss_pred cCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
+|++++++.++ .++++|++..+. .|...| +.+|.++|+++ |+++++|++|+...+.. . .....+ ...+
T Consensus 155 ~d~~~le~~l~~~~~klVi~~~~~--~g~~~d---l~~l~~la~~~-g~~livD~Aha~G~~~~-g-~~~~~~---~~~D 223 (416)
T PRK13034 155 IDYDEVEELAKEHKPKLIIAGFSA--YPRELD---FARFREIADEV-GALLMVDMAHIAGLVAA-G-EHPNPF---PHAH 223 (416)
T ss_pred cCHHHHHHHHhhcCCeEEEECCCc--cccccC---HHHHHHHHHHc-CCEEEEeCcccccCccc-C-CCCCCC---CCce
Confidence 89999999885 367787775554 467778 88999999999 99999999998643321 1 111111 1345
Q ss_pred EEEeccccccccccceeEEEEcChhHH-HHHHhhhhccc--cCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFV-AACNKIQSQFT--SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
++++|++|+++ |...|+++++.+.+ ..++.. .+.+ .++++....++..++... ......+.++++.++.+++
T Consensus 224 i~~~s~~K~l~--g~~GG~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~l~~~a~~l 298 (416)
T PRK13034 224 VVTTTTHKTLR--GPRGGMILTNDEEIAKKINSA-VFPGLQGGPLMHVIAAKAVAFGEA--LQPEFKTYAKQVIANAQAL 298 (416)
T ss_pred EEEEeCcccCC--CCCCeEEEECcHHHHHHHHhh-cCCcccCCccHHHHHHHHHHHHHH--hChhHHHHHHHHHHHHHHH
Confidence 89999999994 22247777765544 434332 2111 123333333333333321 1122345578889999999
Q ss_pred HHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC------CCCCCeEEEEe
Q 018665 253 VKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA------FGDDTCIRISY 325 (352)
Q Consensus 253 ~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~------~~~~~~iRi~~ 325 (352)
++.|++. |+.+..+ .....+.+.+.... .+...+.+.|.++ ||.+.+... ...+..+|+++
T Consensus 299 ~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~----------~~~~~~~~~L~~~-GI~v~~~~~p~~~~~p~~~~~lR~~~ 366 (416)
T PRK13034 299 AEVLKER-GYDLVSGGTDNHLLLVDLRPKG----------LSGKDAEQALERA-GITVNKNTVPGDTESPFVTSGIRIGT 366 (416)
T ss_pred HHHHHHc-CCEeccCCCCCcEEEEEcCCCC----------CCHHHHHHHHHhC-CcEEeccCCCCCCcCCCCCCeeEeCc
Confidence 9999988 8887643 34455556554321 1456666777654 998865211 11245799997
Q ss_pred ec------CHHHHHHHHHHHHHHHhhh
Q 018665 326 AA------SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 326 ~~------~~~~l~~~~~~l~~~~~~~ 346 (352)
+. +++|++++++.|++++.+.
T Consensus 367 ~~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 367 PAGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 65 5799999999999988753
No 260
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=4e-20 Score=162.89 Aligned_cols=286 Identities=20% Similarity=0.285 Sum_probs=198.1
Q ss_pred chhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCc
Q 018665 17 WSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 95 (352)
Q Consensus 17 ~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~ 95 (352)
.+|++.+|+|++ ..+.+.++|+|.|+..+++++ .++||.|++|..+|..+.+..-..|.+++++++++ +.+
T Consensus 37 ~~FE~~~ae~~G-------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~-~T~ 108 (374)
T COG0399 37 RRFEQAFAEYLG-------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDP-DTL 108 (374)
T ss_pred HHHHHHHHHHhC-------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHcCCeEEEEecCC-ccc
Confidence 356799999984 788899999999999999976 58999999999999999999999999999999996 557
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc-ccCCCCccccccCCCCCCc
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI-IYAPATHTSFASLPGMWER 174 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~-~~~~~~~~~~~~~~~~~~~ 174 (352)
.+|++.+++++++++++|+..+ -.|...+ +++|.++|++| |++||+|.+++.. .|.|+...++.
T Consensus 109 nid~~~ie~aIt~~tKAIipVh---l~G~~~d---m~~i~~la~~~-~l~vIEDaAqa~Ga~y~gk~vGt~G-------- 173 (374)
T COG0399 109 NIDPDLIEAAITPRTKAIIPVH---LAGQPCD---MDAIMALAKRH-GLPVIEDAAQAHGATYKGKKVGSFG-------- 173 (374)
T ss_pred CCCHHHHHHHcccCCeEEEEeh---hccCCCC---HHHHHHHHHHc-CCeEEEEcchhccCeecCccccccc--------
Confidence 7999999999999999999544 4577888 99999999999 9999999999853 33443222222
Q ss_pred eEEEecc--ccccccccceeEEEEc-ChhHHHHHHhhhhcc----------------ccCCChHHHHHHHHHhcccCCCh
Q 018665 175 TLTVNGF--SKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF----------------TSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 175 ~i~~~s~--sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
.+.+.|| .|.++ .| -.|.+++ ++++.++++...... ++..+.+..+..... -
T Consensus 174 d~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~Q-------L 244 (374)
T COG0399 174 DIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQ-------L 244 (374)
T ss_pred ceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHH-------H
Confidence 2556776 69887 55 4577665 456777665432111 111222222222222 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCc----eE-EEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE--
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA----FY-LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA-- 308 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~-- 308 (352)
+.+++..++-++..+...+.|++++++.......+ ++ ..+.+++.. .+-+.+.+.|.++ ||.
T Consensus 245 ~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~----------~~R~~l~~~L~~~-gi~~~ 313 (374)
T COG0399 245 ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEG----------ISRDALMESLKEA-GVGAV 313 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCC----------CCHHHHHHHHHhC-CCCce
Confidence 45566666666677788888888766544422222 22 233444320 1567888888866 544
Q ss_pred --eccCCCC--------C----C-------CCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 309 --LVPGDAF--------G----D-------DTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 309 --i~~g~~~--------~----~-------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
..|-... . . ...+.+.+.. +++++++.++.|++++..
T Consensus 314 ~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 314 VYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred EEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 3331110 0 0 1357776665 899999999999998864
No 261
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.88 E-value=2.3e-20 Score=171.01 Aligned_cols=277 Identities=12% Similarity=0.077 Sum_probs=183.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcC-----CCCEEEecCCCCCChHH-HHHhcCC------------eEEEecccCCCCcccC
Q 018665 37 DQILVSNGAKQSILQAVLAVCS-----PGDEVIIPAPFWVSYPE-MARIADA------------TPVILPTRISENFLLD 98 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~-----~~~~vl~~~~~~~~~~~-~~~~~g~------------~v~~i~~~~~~~~~~d 98 (352)
+.++++++|++|++.+++.... ...+|+.....|++... .+...+. .+..+|. .|
T Consensus 135 ~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d 207 (442)
T TIGR03372 135 KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GD 207 (442)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CC
Confidence 6799999999999999986421 23578888887777653 3322221 1122221 25
Q ss_pred HHHHHhhcc------CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 99 PKVLESKLT------EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 99 ~~~l~~~l~------~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
.+.+++.++ +++.++++...+...|... |++.++++.++|++| |+++|+||++.+++.+|.. ..+....-.
T Consensus 208 ~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRtG~~-~a~e~~gv~ 285 (442)
T TIGR03372 208 IEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEF-GALLILDEVQTGMGRTGKM-FACEHEGVQ 285 (442)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeecccCCCccccc-hhhhhcCCC
Confidence 666666553 3567777777777778655 678899999999999 9999999999988766642 222222211
Q ss_pred CCceEEEecccccccccc-ceeEEEEcChhHHHHHHh--hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 248 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 248 (352)
+| +.+++|.+| +| +++|.+++++++.+.+.. .....+++.|+...+++.+.|+.-.. ++..++..+.-...
T Consensus 286 PD----ivt~gK~lg-~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~-~~l~~~~~~~G~~l 359 (442)
T TIGR03372 286 PD----ILCLAKALG-GGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE-KNLPAQAAIKGDFL 359 (442)
T ss_pred CC----eeeehhhhc-CCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 22 445899998 88 699999999998887742 23455677899999999999876211 12233333333333
Q ss_pred HHHHHHHhcccC-CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec
Q 018665 249 RDFLVKSFGELE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA 327 (352)
Q Consensus 249 ~~~l~~~l~~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~ 327 (352)
++.|.+...+.| .+.-+. ..|.++.+++.+.. ....+.+.|+++ |+.+.+... ..+.+|+.++.
T Consensus 360 ~~~L~~l~~~~~~~i~~vR-G~Gl~~giel~~~~-----------~~~~i~~~l~~~-Gvl~~~~~~--~~~~lr~~Ppl 424 (442)
T TIGR03372 360 LDGFQQLAAEYPDLIIEAR-GKGLLMAIEFRDNE-----------IGYAFAKELFQQ-NILVAGTLN--NAKSIRIEPPL 424 (442)
T ss_pred HHHHHHHHHhCCCceEEEe-cceEEEEEEeCChH-----------HHHHHHHHHHHC-CcEEeecCC--CCCEEEEECCc
Confidence 333433333343 222222 44666777775420 356788888876 899865321 24789998887
Q ss_pred --CHHHHHHHHHHHHHHH
Q 018665 328 --SLTTLQAAVERIKKGL 343 (352)
Q Consensus 328 --~~~~l~~~~~~l~~~~ 343 (352)
+++|+++++++|.+++
T Consensus 425 ~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 425 TITIEQCALVIKAAKDAL 442 (442)
T ss_pred ccCHHHHHHHHHHHHHhC
Confidence 9999999999998864
No 262
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.88 E-value=5.2e-20 Score=167.61 Aligned_cols=293 Identities=13% Similarity=0.133 Sum_probs=194.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CCCEEEecCCCCCChH-HHHHhcCCeE---EEecc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS-------PGDEVIIPAPFWVSYP-EMARIADATP---VILPT 89 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~~~~vl~~~~~~~~~~-~~~~~~g~~v---~~i~~ 89 (352)
..+++++.... ..+.+++++|+++|++.+++.+.. ...+|+..+..|++.. ..+...+... .+.|.
T Consensus 81 ~~la~~l~~~~---~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~ 157 (395)
T PRK03715 81 AKLAGLLTQHS---CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQ 157 (395)
T ss_pred HHHHHHHhhcc---CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCC
Confidence 77777776211 246899999999999999988641 1256887777776654 4444433221 11111
Q ss_pred cCC--CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 90 RIS--ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 90 ~~~--~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
... .....|++.+++.+++++++|+++..++..|... |.+.+++|.++|+++ |+++|+||++.+++..|.... ..
T Consensus 158 ~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~GRtG~~~a-~~ 235 (395)
T PRK03715 158 VPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQH-GLLLIVDEVQTGCGRTGTLFA-YE 235 (395)
T ss_pred CCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCcchhh-Hh
Confidence 100 0001478999999987888888887788888765 688999999999999 999999999998766664221 11
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
..... .-+.+++|.+| +|.++|.+++++++.. +.......+++.++...+++.++++.- + -+++.++.+
T Consensus 236 ~~gv~----PDi~t~gK~lg-~G~p~~av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l----~-~~~l~~~~~ 304 (395)
T PRK03715 236 LSGIE----PDIMTLGKGIG-GGVPLAALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQL----L-APGFLEGVR 304 (395)
T ss_pred hcCCC----Cceeeehhhhh-CCcceEEEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHH----H-hccHHHHHH
Confidence 11111 12567899998 7899999999888753 322223456678899998888888752 1 134455666
Q ss_pred HHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc--cCEEeccCCCCCCCCeE
Q 018665 247 ERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK--AQVALVPGDAFGDDTCI 321 (352)
Q Consensus 247 ~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~gi~i~~g~~~~~~~~i 321 (352)
++-+++.+.|+++ .++..+. ..|.++.+++.+. ....+.+.+.+. .|+.+.+. .++.+
T Consensus 305 ~~g~~l~~~L~~l~~~~~i~~vr-G~Glm~~i~l~~~------------~~~~~~~~~~~~~~~Gi~~~~~----~~~~l 367 (395)
T PRK03715 305 ARGEYLKEKLLELSEERGLEGER-GEGLLRALLLGKD------------IGPQIVEKARDMQPDGLLLNAP----RPNLL 367 (395)
T ss_pred HHHHHHHHHHHHHhhcCCcCeEE-cceeEEEEEecCc------------hHHHHHHHHHhccCCCEEEeec----CCCEE
Confidence 6666666666543 1343332 3466677777532 233444433321 28888643 24789
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 322 RISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 322 Ri~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
|++++. +++|+++++++|+++++++
T Consensus 368 R~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 368 RFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 999987 9999999999999999764
No 263
>PRK02769 histidine decarboxylase; Provisional
Probab=99.88 E-value=6.7e-20 Score=165.12 Aligned_cols=282 Identities=13% Similarity=0.119 Sum_probs=203.6
Q ss_pred HHHHHHHHhcCCCCCCCcE--EEeCChHHHHHHHHHHh--cCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQI--LVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l--~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++++ .+++++ ++|+|+|+++..++... ..++++|+++...|.+...+++..|.+...++.++ ++.
T Consensus 72 ~~~a~l~g-----~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~--~g~ 144 (380)
T PRK02769 72 NFFAELFK-----IPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP--NGE 144 (380)
T ss_pred HHHHHHhC-----CCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCC--CCc
Confidence 55566665 444454 88999999988776554 24568999999999999999999999998888863 556
Q ss_pred cCHHHHHhhccCC---eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC---EEEEecccccccccCCCCccccccCCC
Q 018665 97 LDPKVLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR---LLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 97 ~d~~~l~~~l~~~---~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~---~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
+|+++|+++++++ +.+|+++.++|++|.+.| +++|+++|+++ | +++++|.+++++...-...... +..
T Consensus 145 id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~-g~~~~~lHVDaA~gg~~~p~~~~~~~--~d~ 218 (380)
T PRK02769 145 IDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKI-GIDDYYIHADAALSGMILPFVNNPPP--FSF 218 (380)
T ss_pred CcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh-CCCceEEEEEecccceeecccCcccc--CCc
Confidence 9999999999765 889999999999999999 99999999999 8 7999999998743210000000 111
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh-------ccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
..+-+.+..|.+|.++ ...++|+++.+++.++.+..... ...++.+.....++.+++.. ...+.+++..+
T Consensus 219 ~~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~--lg~~G~~~~~~ 295 (380)
T PRK02769 219 ADGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS--LGSKGLRQRVQ 295 (380)
T ss_pred cCCCCEEEECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH--HCHHHHHHHHH
Confidence 1134578899999987 45678999988877666532111 11234455555556666554 24677899999
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEE
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 323 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi 323 (352)
+..++.+++.+.|++. |+..........+.+..|. +++ .+ |..+.+- +.++|+
T Consensus 296 ~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~---------------~~~----~~--~w~l~~~-----~~~~hi 348 (380)
T PRK02769 296 HCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPS---------------ERI----WK--KWHLATS-----GNQAHI 348 (380)
T ss_pred HHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCC---------------HHH----Hh--CeeEccc-----CCEEEE
Confidence 9999999999999886 8887765555556555432 122 22 4555442 458999
Q ss_pred Eeec--CHHHHHHHHHHHHHHHhh
Q 018665 324 SYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 324 ~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
.+.. +.+.++++++.|.+....
T Consensus 349 ~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 349 ITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred EECCCCCHHHHHHHHHHHHHHHhc
Confidence 8876 888999999999888763
No 264
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.88 E-value=4.2e-20 Score=181.14 Aligned_cols=300 Identities=16% Similarity=0.129 Sum_probs=215.5
Q ss_pred hhhHHHHHHHHhcCCCCCCCcEEEeCChH----HHHHHHHHHhcCC-CC----EEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 18 SFVQQFVINLKENGLSYTPDQILVSNGAK----QSILQAVLAVCSP-GD----EVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 18 ~~~~~ia~~~~~~~~~~~~~~i~~~~g~~----~a~~~~~~~l~~~-~~----~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
+.++.++++++ .++|.++++++ ++++.+++.+.++ || .|+++...|......++..|++++.++
T Consensus 572 ~~r~~la~i~g-------~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~ 644 (993)
T PLN02414 572 DLGDLLCEITG-------FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVG 644 (993)
T ss_pred HHHHHHHHHhC-------CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEec
Confidence 33488888875 49999999999 8999999998755 76 899999999999999999999999999
Q ss_pred ccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 89 TRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 89 ~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.+. ++.+|+++|++++++ ++++|++++|+|-+|...| +++|+++|+++ |+++++|.++.... .+ ...
T Consensus 645 ~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~-Galv~vDgAq~~a~-~~--l~~- 714 (993)
T PLN02414 645 TDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDN-GGQVYMDGANMNAQ-VG--LTS- 714 (993)
T ss_pred cCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHc-CCEEEEEecCHHhc-cC--cCC-
Confidence 973 346999999999984 7899999999999999999 99999999999 99999999986411 00 111
Q ss_pred ccCCCCCCceEEEeccccccc----cccceeEEEEcChhHHHHHHhhh-----------hcc-ccCCC--h----HHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKIQ-----------SQF-TSGAS--S----ISQKA 223 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g----~~g~~~g~l~~~~~~~~~~~~~~-----------~~~-~~~~~--~----~~~~~ 223 (352)
+.+.+-+++.+|.+|+|+ .+|.++|++.+.+++...+.... ... ..+.+ + .....
T Consensus 715 ---p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~ 791 (993)
T PLN02414 715 ---PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPI 791 (993)
T ss_pred ---ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHH
Confidence 122455699999999775 34567999999887766654321 001 11111 1 22222
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE--EEeecCCccCCcccCCCCCCChHHHHHHH
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYL 301 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (352)
+...+.. ++.+.+.+..+....+..++.++|++..++.+..+.+.++ +.+.++... +..| .++.+++++|
T Consensus 792 A~~yi~~--lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~--~~~g----~~~~di~krL 863 (993)
T PLN02414 792 SYTYIAM--MGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFK--NTAG----IEPEDVAKRL 863 (993)
T ss_pred HHHHHHH--HCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccc--cccC----CCHHHHHHHH
Confidence 2333322 3467788888888999999999998744555543333322 223333110 0001 1678999999
Q ss_pred HHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 302 LDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 302 ~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
. ++||....-+ |-.++++|++++. +.+|||++++.+..+..+..
T Consensus 864 ~-d~Gihapt~~-~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 864 M-DYGFHAPTMS-WPVPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred H-HcCcEEeeec-cccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 9 5588754422 3347899999988 88999999999988887765
No 265
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=1.6e-20 Score=160.44 Aligned_cols=300 Identities=16% Similarity=0.125 Sum_probs=206.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~ 80 (352)
-|+.++-..++. +.+++.++ .+.++|+++||+++..++.+.+++++.|++-.-.|.... .+++.+
T Consensus 30 ~YG~D~~~~~~e------~~~ae~~g-------~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~ 96 (342)
T COG2008 30 VYGEDPTTNALE------QRIAELFG-------KEAALFVPSGTQANQLALAAHCQPGESVICHETAHIYTDECGAPEFF 96 (342)
T ss_pred CCCCCHHHHHHH------HHHHHHhC-------CceEEEecCccHHHHHHHHHhcCCCCeEEEeccccceecccCcHHHH
Confidence 477777777888 99999985 499999999999999999999999999999887776544 344444
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+-- ..++..+..+..+++++++..++. .+.++++.+.++..|+++|.+++++|.++|+++ |++|..|.+.-.
T Consensus 97 ~~~-~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~-~l~LHmDGAR~~ 174 (342)
T COG2008 97 GGG-QKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEH-GLPLHMDGARLA 174 (342)
T ss_pred cCC-ceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHh-CCceeechHHHH
Confidence 411 123333335567999999998863 345666666666899999999999999999999 999999998654
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHH--HhcccC
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVA--ALGLGY 232 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~ 232 (352)
....... ++..... ...+.+..++||..+.++ -+.++.+++++++++.+........+.....++.. +|++
T Consensus 175 nA~valg-~~~~~~~--~~~D~v~~~~tK~g~~~~--gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~-- 247 (342)
T COG2008 175 NALVALG-VALKTIK--SYVDSVSFCLTKGGGAPV--GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALED-- 247 (342)
T ss_pred HHHHHcC-CCHHHHH--hhCCEEEEecccCCccee--eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc--
Confidence 3221111 2222222 123366667899876443 24445899999998877666655555544444433 3432
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
+-|+ ....+-+.....|.+.|+..+|+++..|...+++++.+++.. .+.......+.. .|+.+.++
T Consensus 248 --~~~~-~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~----------i~~l~~~~~~~~-~~~~~~~~ 313 (342)
T COG2008 248 --DVWR-LAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA----------IEALRLAGALFY-RGVLIGAH 313 (342)
T ss_pred --cHHH-HHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH----------HHHHHhhchhhe-eeeeccCC
Confidence 2222 222333445888999999888999998888888999987631 022223333332 24554432
Q ss_pred CCCCCCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 313 DAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
+ ..+|+..+. +++++++++..++++.
T Consensus 314 ~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 314 G-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred C-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 1 478998887 8899999999998865
No 266
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.88 E-value=1.8e-19 Score=159.70 Aligned_cols=210 Identities=17% Similarity=0.173 Sum_probs=159.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++- ..+..+.++||++|+..++.+++++||+|++++..|.+... .+++.|+++.+++..
T Consensus 70 ~~~a~LE-------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~------ 136 (396)
T COG0626 70 EALAELE-------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG------ 136 (396)
T ss_pred HHHHHhh-------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC------
Confidence 7887774 47889999999999999999999999999999999998774 446789999988742
Q ss_pred cCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
+.+++++++. +++++|++..|.||+-.+.+ +.+|+++|+++ |+++|+|+++.... ..-+-..+-+
T Consensus 137 -~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~-g~~vvVDNTfatP~---------~q~PL~~GaD 202 (396)
T COG0626 137 -DDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAY-GALVVVDNTFATPV---------LQRPLELGAD 202 (396)
T ss_pred -ChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhc-CCEEEEECCccccc---------ccChhhcCCC
Confidence 4556666676 59999999999999999999 99999999999 99999999987521 1111123566
Q ss_pred EEEeccccccccc-cceeEEEEcChh-HHHHHHhhhh-ccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMT-GWRLGYIAGPKH-FVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 176 i~~~s~sK~~g~~-g~~~g~l~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
|++.|.+|.++.. ..=.|.++++.+ +.+.+..... ..+..++++....+.+.+++ +.-+.++..++...+
T Consensus 203 IVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT-------L~~Rm~~~~~nA~~I 275 (396)
T COG0626 203 IVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRT-------LALRMERHNENALKI 275 (396)
T ss_pred EEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch-------HHHHHHHHHHHHHHH
Confidence 9999999999523 344565665554 4444433333 35667788887777766654 555566677778888
Q ss_pred HHHhcccCCcee
Q 018665 253 VKSFGELEGVKM 264 (352)
Q Consensus 253 ~~~l~~~~g~~~ 264 (352)
.+.|++.|.++-
T Consensus 276 A~~L~~~p~V~~ 287 (396)
T COG0626 276 AEFLADHPKVKK 287 (396)
T ss_pred HHHHhcCCCeEE
Confidence 888888766643
No 267
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.87 E-value=2.8e-20 Score=166.39 Aligned_cols=280 Identities=12% Similarity=0.115 Sum_probs=200.7
Q ss_pred HHHHHHHHhcCCCC-CCCcEEEeCC-hHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEEecccCCCCc-
Q 018665 21 QQFVINLKENGLSY-TPDQILVSNG-AKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENF- 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~-~~~~i~~~~g-~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~i~~~~~~~~- 95 (352)
+.++++++ . +..+|++++| +|++++.++..+.++++++++...+.++.+ ..++..|. ++.+..++..+|
T Consensus 44 ~~l~~l~~-----~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~ 117 (349)
T TIGR01364 44 SDLRELLN-----IPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYT 117 (349)
T ss_pred HHHHHHhC-----CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCC
Confidence 66666654 3 2356777755 999999999999988999888877666544 78889999 777775432222
Q ss_pred -ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 96 -LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 96 -~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.+++++++ +++++++|.+++..+.||...+ ++++.+ ++++++|.+++. +..+..+.. .+
T Consensus 118 ~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l~~~~-~~l~iVDavss~----g~~~id~~~----~d- 177 (349)
T TIGR01364 118 KIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------ELPDVK-NAPLVADMSSNI----LSRPIDVSK----FG- 177 (349)
T ss_pred CCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------eecccC-CCeEEEEccccc----cCccCCHHH----cc-
Confidence 35666655 3468899999999999999876 556678 999999999875 332333322 23
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhh----------h--hccccCCChHHHHHHHHHhcccCCChH-HHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI----------Q--SQFTSGASSISQKAGVAALGLGYAGGE-VVSKM 241 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 241 (352)
++++|.+|.+|.+ ++|+++.++++++++... . ....+++|.....++.++++.- ..+ .++.+
T Consensus 178 -~~~~ssqK~lgP~--Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l--~~~gG~e~i 252 (349)
T TIGR01364 178 -LIYAGAQKNIGPA--GLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWL--KEQGGVKAI 252 (349)
T ss_pred -EEEEecccccCCC--ceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHH--HHcCCHHHH
Confidence 8899999999844 489999999888765221 1 1223578888888888888862 234 58999
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCC----CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
.++.+++.+++++.|++++|+..... +....+.+.+++.. ...++...+.+ .|+.+.+|.. .
T Consensus 253 ~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~-----------~~~~~~~~~~~-~Gi~~~~~~~--~ 318 (349)
T TIGR01364 253 EKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE-----------LEKRFLKEAEE-RGLVSLKGHR--S 318 (349)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChh-----------HhHHHHHHHHH-CCCcccCCcc--c
Confidence 99999999999999999977644421 23344555655320 23566566665 4887777654 3
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
.+.+|+|+.. +.||++++++.|+++.+.
T Consensus 319 ~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 319 VGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred cCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 5799999987 899999999999997753
No 268
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=2.5e-19 Score=165.38 Aligned_cols=291 Identities=14% Similarity=0.177 Sum_probs=187.0
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHH-HHHhcC-------------CeEEEecccCCCC--cc-c
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPE-MARIAD-------------ATPVILPTRISEN--FL-L 97 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~-~~~~~g-------------~~v~~i~~~~~~~--~~-~ 97 (352)
+.++++++|++|++.+++... ....+|+.....|++... .+...+ ..+..+|.++... +. .
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP 183 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 589999999999999998642 223568888877777653 332222 1233344332110 00 0
Q ss_pred C-------HHHHHhhc-----cCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 98 D-------PKVLESKL-----TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 98 d-------~~~l~~~l-----~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
+ ++++++.+ .+++.+|++...++..|.. +|.+.+++|.++|++| |+++|+||++.++...|.. ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~-g~llI~DEv~tg~GrtG~~-~a 261 (445)
T PRK08593 184 DANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH-GILFAVDDIQQGLGRTGKW-SS 261 (445)
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCchH-HH
Confidence 1 23444433 2467788888778777876 6888999999999999 9999999999988766542 11
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
.......++ +.+++|.+| +|+++|++++++++++.+......++++.++..++++.++++.-.. . ++.++
T Consensus 262 ~~~~gv~pD----i~t~gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~----~l~~~ 331 (445)
T PRK08593 262 ISHFNITPD----LMSFGKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIED-E----SLLQR 331 (445)
T ss_pred HHhcCCCCC----Eeeeccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh-c----cHHHH
Confidence 121211112 557899998 7899999999999998876444556778999999989998875211 2 33344
Q ss_pred HHHHHHHHHHHhc----ccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCe
Q 018665 245 FRERRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 320 (352)
Q Consensus 245 ~~~~~~~l~~~l~----~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~ 320 (352)
.+++-+++.+.|+ +.+.+.-+. ..|.++.+.+.......... ......+.+.++++ ||.+.+. ..+.
T Consensus 332 ~~~~g~~l~~~L~~l~~~~~~v~~vr-G~Gl~~gi~l~~~~~~~~~~---~~~~~~~~~~~~~~-Gv~~~~~----~~~~ 402 (445)
T PRK08593 332 SAEKGEYARKRFDQWVSKYNFVGDVR-GYGLSIGIDIVSDKKLKTRD---NEAALKICNYCFEH-GVVIIAV----AGNV 402 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEe-ccceEEEEEEecCCCcCCCc---HHHHHHHHHHHHHC-CeEEecc----CCCE
Confidence 4444444444444 343232222 33555555553211000000 00245688888865 9988653 2468
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 321 IRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 321 iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+|+.++. +++|++++++++.++++++..
T Consensus 403 lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 403 LRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 9998887 999999999999999987754
No 269
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=1.1e-19 Score=167.77 Aligned_cols=286 Identities=13% Similarity=0.162 Sum_probs=190.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc---C-C-CCEEEecCCCCCChHHH-HHhcCCeEEE---ecccCCCC--cccCHHHHHh
Q 018665 36 PDQILVSNGAKQSILQAVLAVC---S-P-GDEVIIPAPFWVSYPEM-ARIADATPVI---LPTRISEN--FLLDPKVLES 104 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~---~-~-~~~vl~~~~~~~~~~~~-~~~~g~~v~~---i~~~~~~~--~~~d~~~l~~ 104 (352)
.+.++++++|++|++.+++... . + ..+|+.....|++.... +...+..... .+..+.-. .-.|.+.+++
T Consensus 141 ~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 220 (459)
T PRK11522 141 LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRT 220 (459)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHH
Confidence 3689999999999999998643 1 1 24688888888876533 3222211110 11110000 0026677777
Q ss_pred hcc------CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEE
Q 018665 105 KLT------EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 177 (352)
Q Consensus 105 ~l~------~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 177 (352)
.++ +++.++++...+...|.. .|.+.++++.++|++| |+++|+||++.+++..|.. .........+|
T Consensus 221 ~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~-g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD---- 294 (459)
T PRK11522 221 ALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEF-GALLILDEVQTGMGRTGKM-FACEHENVQPD---- 294 (459)
T ss_pred HHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEeccceecCCccchh-hhhhccCCCCC----
Confidence 664 356677777777777875 5677899999999999 9999999999988666652 12222221122
Q ss_pred Eecccccccccc-ceeEEEEcChhHHHHHHh--hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 178 VNGFSKAFAMTG-WRLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 178 ~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
+.+++|.+| +| +++|.+++++++.+.+.. .....+++.|+...+++.+.++.-.. + .+.++.+++-+++.+
T Consensus 295 ivt~gK~lg-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~-~----~l~~~~~~~g~~l~~ 368 (459)
T PRK11522 295 ILCLAKALG-GGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE-Q----NLPAQAEQKGDYLLD 368 (459)
T ss_pred EEEechhhh-CCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc-c----hHHHHHHHHHHHHHH
Confidence 447899998 78 699999999998887642 23455677899999999999886221 2 344555555566666
Q ss_pred Hhccc----CC-ceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--
Q 018665 255 SFGEL----EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-- 327 (352)
Q Consensus 255 ~l~~~----~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-- 327 (352)
.|+++ |. +.-+. ..|.++.+++.+. .....+.+.|+++ ||.+.+.. ...+.+|+.++.
T Consensus 369 ~L~~l~~~~~~~i~~Vr-G~Gl~~giel~~~-----------~~~~~i~~~l~~~-Gvl~~~~~--~~~~~lr~~Ppl~~ 433 (459)
T PRK11522 369 GFRQLAREYPDLVQEAR-GKGMLMAIEFVDN-----------EIGYNFASEMFRQ-RVLVAGTL--NNAKTIRIEPPLTL 433 (459)
T ss_pred HHHHHHHhCCCceeeEE-eceeEEEEEecCc-----------hHHHHHHHHHHHC-CeEEEecC--CCCCEEEEECCccC
Confidence 66543 22 22222 3466677777542 0356788888875 99987532 135789998887
Q ss_pred CHHHHHHHHHHHHHHHhhhCC
Q 018665 328 SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+++|+++++++|.++++++..
T Consensus 434 t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 434 TIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987653
No 270
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=2.5e-19 Score=164.08 Aligned_cols=212 Identities=12% Similarity=0.132 Sum_probs=154.2
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccCCCC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISEN 94 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~~~ 94 (352)
|++.+|++.+ .+..++++++++|+..++.+++++||+|+++...|.+.. ..++..|+++++++.+
T Consensus 74 le~~la~l~g-------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~---- 142 (437)
T PRK05613 74 LENRIASLEG-------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENP---- 142 (437)
T ss_pred HHHHHHHHhC-------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCC----
Confidence 3488888875 345566666668888888888899999999999999874 4557889999999721
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.|++++++++++++++|+++++.||+|.+.| +++|+++|+++ |+++|+|.+++.. ....++ . .+-
T Consensus 143 --~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~-gi~livD~t~a~g----~~~~p~-~----~Ga 207 (437)
T PRK05613 143 --DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRN-QVPLIVDNTIATA----ALVRPL-E----LGA 207 (437)
T ss_pred --CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCeEEEECCCccc----cccChH-H----hCC
Confidence 2789999999999999999999999999999 99999999999 9999999998642 111111 1 244
Q ss_pred eEEEeccccccccccceeEEEEc-ChhH-----------------------------------H-HHHHhhhhccccCCC
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAG-PKHF-----------------------------------V-AACNKIQSQFTSGAS 217 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~-~~~~-----------------------------------~-~~~~~~~~~~~~~~~ 217 (352)
++++.|++|.++..|..+|.+++ +.++ . +.........+...+
T Consensus 208 Divv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 287 (437)
T PRK05613 208 DVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLS 287 (437)
T ss_pred CEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCC
Confidence 59999999999755555555443 3210 0 011122334455677
Q ss_pred hHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCce
Q 018665 218 SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 263 (352)
Q Consensus 218 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~ 263 (352)
++....+...+++ +..+.++..++...+.+.|++.|.+.
T Consensus 288 p~~a~l~~rgl~T-------L~lR~~~~~~nA~~lA~~L~~hp~V~ 326 (437)
T PRK05613 288 PFNAWVTAQGLDT-------LSLRLERHNENAIKVAEFLNNHEKVA 326 (437)
T ss_pred HHHHHHHHcccCc-------HHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 7777666655544 55566677778888999999887653
No 271
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.87 E-value=7.9e-20 Score=166.84 Aligned_cols=304 Identities=13% Similarity=0.083 Sum_probs=203.4
Q ss_pred HHHHHHHHhcCCCCC-C-CcEEE--eCChHHHHHHHHHHhcC--------C-----CCEEEecCCCCCChHHHHHhcCCe
Q 018665 21 QQFVINLKENGLSYT-P-DQILV--SNGAKQSILQAVLAVCS--------P-----GDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~-~~i~~--~~g~~~a~~~~~~~l~~--------~-----~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
+.++++++ .+ + +++.+ |+|+|++++.++.+... . ...|+++.-.|.++..+++..|++
T Consensus 87 ~~la~llg-----~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~ 161 (431)
T TIGR01788 87 NMLADLWH-----APAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVE 161 (431)
T ss_pred HHHHHHhC-----CCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCce
Confidence 55555554 33 2 45554 89999999988865421 1 136899999999999999999999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-----CEEEEeccccccccc-
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-----RLLVLSDEIYEHIIY- 157 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~-----~~~livD~~~~~~~~- 157 (352)
++.+|++. +++.+|+++|++++++++.+|+++..+|.+|.+.| +++|+++|++++ |+++++|.+++++..
T Consensus 162 v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p 237 (431)
T TIGR01788 162 LREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VKALNDALDEYNAKTGWDIPIHVDAASGGFIAP 237 (431)
T ss_pred eEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HHHHHHHHHHHHhhhCCCceEEEecccHHHHHH
Confidence 99999975 34569999999999999999999999999999999 889999998873 699999999996431
Q ss_pred --CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh--HHHHHHhh---h----hccccCCChHHHHHHHH
Q 018665 158 --APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACNKI---Q----SQFTSGASSISQKAGVA 226 (352)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~--~~~~~~~~---~----~~~~~~~~~~~~~~~~~ 226 (352)
.+.....+. ...-+.+..|.||++. +..++|+++.+++ +.+.+... . ...+...+.....++..
T Consensus 238 ~~~~~~~~~~~----~~~~DSis~s~HK~~~-~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~ 312 (431)
T TIGR01788 238 FVYPDLEWDFR----LPRVKSINVSGHKYGL-VYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQ 312 (431)
T ss_pred HhCCCchhhcC----CCCceEEEECchhccC-CCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHH
Confidence 122222221 1234468889999862 3445788876553 22322110 0 00111122222112222
Q ss_pred HhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHcc
Q 018665 227 ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 305 (352)
Q Consensus 227 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (352)
.+....+....++++.++..++.+++.+.|++.++++++.+ +....+.+++.+... .+ .+..++.+.|.++
T Consensus 313 w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~---~~----~~~~~l~~~L~~~- 384 (431)
T TIGR01788 313 YYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDAD---PG----YTLYDLSHRLRER- 384 (431)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCC---CC----cCHHHHHHHHHHC-
Confidence 22211123577888899999999999999999988998865 333445555543100 00 1677899988876
Q ss_pred CEEeccCCC---CCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 306 QVALVPGDA---FGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 306 gi~i~~g~~---~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
|+.+..-.. ....-++|+++.. +.+.++++++.|++++..+
T Consensus 385 G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 385 GWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 876433221 1122468998864 7899999999999998764
No 272
>PRK07678 aminotransferase; Validated
Probab=99.87 E-value=1.6e-19 Score=167.01 Aligned_cols=298 Identities=14% Similarity=0.086 Sum_probs=187.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHHHHH-hcC------------CeEEEecccCCCC-
Q 018665 37 DQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPEMAR-IAD------------ATPVILPTRISEN- 94 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~~~~-~~g------------~~v~~i~~~~~~~- 94 (352)
+.+++++||++|++.+++.... ...+|+.....|++....+. ..+ ..+..++.+....
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (451)
T PRK07678 106 YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRM 185 (451)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccc
Confidence 5899999999999999987421 12578888888887654332 211 1122233221110
Q ss_pred -cc-----cC---HHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 95 -FL-----LD---PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 95 -~~-----~d---~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
+. .+ ++.+++.+. +++.+|++...+...|.. +|.+.++++.++|++| |+++|+||++.+|...|.
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~tGfGRtG~ 264 (451)
T PRK07678 186 PGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH-GALLISDEVICGFGRTGK 264 (451)
T ss_pred cccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhcCCcCch
Confidence 00 01 233555553 467788887777666766 5677999999999999 999999999999877664
Q ss_pred CccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh------hhccccCCChHHHHHHHHHhcccCC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
. ..+....-. .-+.+++|.+| +| +++|.+++++++.+.+... ....+++.|++..+++.++++.-..
T Consensus 265 ~-~~~~~~gv~----PDivt~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~ 338 (451)
T PRK07678 265 A-FGFMNYGVK----PDIITMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN 338 (451)
T ss_pred h-HHHHhcCCC----CCEEEeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh
Confidence 2 112222211 22557799998 67 6999999999998887631 3456788999999999999986211
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
++..+++.+.-...++.+.+.+++.+.+.-+. ..|.++.+++........... .....++.+.++++ |+.+.+..
T Consensus 339 -~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vr-g~Gl~~~i~~~~~~~~~~~~~--~~~a~~i~~~l~~~-Gv~~~~~g 413 (451)
T PRK07678 339 -ENLIERSAQLGELLLEQLKEELGEHPLVGDIR-GKGLLVGIELVNDKETKEPAD--NDKVASVVAACKEK-GLIIGKNG 413 (451)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-eeceEEEEEEecCCcccCcCc--hHHHHHHHHHHHHC-CcEEeecC
Confidence 22233333333444444444444443332233 345556666532111000000 00245778888876 99986632
Q ss_pred C--CCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 314 A--FGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 314 ~--~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
. ....+.+|++++. +++||+++++++.++++++
T Consensus 414 ~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 414 DTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred ccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 1 1224789999887 9999999999999999865
No 273
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.87 E-value=1.6e-19 Score=158.94 Aligned_cols=300 Identities=15% Similarity=0.163 Sum_probs=199.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHH-hcCC---------------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMAR-IADA--------------- 82 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~-~~g~--------------- 82 (352)
+.+.+.+ ..-+.|-+++++|+|...+++... -..++|+....||+++.+.+. ..|.
T Consensus 100 ell~~~~------p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~ 173 (432)
T COG0001 100 ELLIERV------PSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPA 173 (432)
T ss_pred HHHHHhc------CcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCCh
Confidence 5555554 245999999999999999988642 234799999999998886443 3331
Q ss_pred ----eEEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 83 ----TPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 83 ----~v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
.+..+|. .|++.+++++++ +..+|++.......|.+ +.++++++|.++|+++ |+++|.||+..+
T Consensus 174 ~~a~~ti~~~y-------ND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~-G~lLI~DEViTG 245 (432)
T COG0001 174 DVAKHTLVLPY-------NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH-GALLIFDEVITG 245 (432)
T ss_pred hhhccEEEecC-------CCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEecchhh
Confidence 1222221 278888888863 67777776665445664 5566899999999999 999999999988
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh---hccccCCChHHHHHHHHHhccc
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~ 231 (352)
|...-.....+..+ ..-+.+++|.+| +|+++|.+-++.++++.+.... ...+++.|+..+.|..+.++.-
T Consensus 246 FR~~~gGaq~~~gi------~PDlttlGKiIG-GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l 318 (432)
T COG0001 246 FRVALGGAQGYYGV------EPDLTTLGKIIG-GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEEL 318 (432)
T ss_pred cccCCcccccccCc------Ccchhhhhhhhc-CCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHH
Confidence 75432222233322 234889999999 9999999999999999876443 3346788999999999988752
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCC--CCChHHHHHHHHHccCEEe
Q 018665 232 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK--IENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~i 309 (352)
...+...+++.+.-.+.++-+.+.+.+. ++.+.....|-++.+.+.+.....+..... .+.-..+.+.|+++ ||++
T Consensus 319 ~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l 396 (432)
T COG0001 319 MTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYL 396 (432)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-Cccc
Confidence 1101134444444444555555555555 777765554444444433211111110000 00123466678876 9999
Q ss_pred ccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 310 VPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 310 ~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
.|+. -...-+|.++++++|++.++.+.++++++.
T Consensus 397 ~ps~----~ea~flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 397 APSQ----FEAGFLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred CCcc----ccceeeecccCHHHHHHHHHHHHHHHHHhh
Confidence 8863 245578888999999999999999988764
No 274
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.86 E-value=2.3e-20 Score=168.23 Aligned_cols=278 Identities=14% Similarity=0.134 Sum_probs=190.9
Q ss_pred HHHHHHHHhcCCCC-CCCcEEEeCC-hHHHHHHHHHHhcC---CCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCc
Q 018665 21 QQFVINLKENGLSY-TPDQILVSNG-AKQSILQAVLAVCS---PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~-~~~~i~~~~g-~~~a~~~~~~~l~~---~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~ 95 (352)
+.++++++ . ++++|++++| +|++++.++..+.. +++.|+. .+....+...++..|.+++.++.+.+.++
T Consensus 51 ~~l~~l~~-----~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~ 124 (355)
T cd00611 51 SDLRELLN-----IPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY 124 (355)
T ss_pred HHHHHHhC-----CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC
Confidence 88888886 4 4578999977 99999999999976 4444433 33333334577899999999998643222
Q ss_pred ccC-HHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 96 LLD-PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 96 ~~d-~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.+ ++..+..+++++++|.+++..|.||...+ ++++.+ |+++++|.+++. |..+..+... +
T Consensus 125 -~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--------~i~~~~-g~~~~VDa~qs~----g~~~idv~~~----~- 185 (355)
T cd00611 125 -TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD--------EVPDTG-GVPLVADMSSNI----LSRPIDVSKF----G- 185 (355)
T ss_pred -CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc--------eecccC-CCeEEEEccccc----cCCCCCHHHh----C-
Confidence 13 33333445678999999999999999844 234458 999999999986 3333333321 2
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhh------------hhccccCCChHHHHHHHHHhcccCCChH-HHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE-VVSKM 241 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 241 (352)
+++.|.+|.+|.+ ++|++++++++++++... ...+..++|.....++.++++.- ... .++.+
T Consensus 186 -~~~ss~~K~lGP~--G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l--~~~gg~e~i 260 (355)
T cd00611 186 -VIYAGAQKNLGPA--GVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWL--KEQGGVEAM 260 (355)
T ss_pred -EEEeecccccCCC--ceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHH--HHcCCHHHH
Confidence 4667789988744 589999999888765421 01113567888888888888752 133 58888
Q ss_pred HHHHHHHHHHHHHHhcccCCce-ec-C--CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 242 VKAFRERRDFLVKSFGELEGVK-MS-E--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~-~~-~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
.++.+++.+++.+.|+++||+. .. . .+.+..+.+.+++.. ...++.+.+.+ .|+.+.++.. .
T Consensus 261 ~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~-----------l~~~~~~~~~r-~G~~~~~~~~--~ 326 (355)
T cd00611 261 EKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEE-----------LEKEFLKEAEA-AGMIGLKGHR--S 326 (355)
T ss_pred HHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChh-----------hhHHHHHHHHH-CCCcccCCCc--c
Confidence 9999999999999999998863 21 1 123344555655320 23444455554 4887666543 3
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
.+.+|+|+.. +++|++++++.|+++
T Consensus 327 ~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 327 VGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 5799999988 999999999999985
No 275
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.3e-19 Score=149.38 Aligned_cols=302 Identities=18% Similarity=0.234 Sum_probs=210.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChH---HHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYP---EMAR 78 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~---~~~~ 78 (352)
.|+.++...+|+ +..|+.++ +..-+|+ +|+|.++.++++.. -++|..|++.+-+|.... .+..
T Consensus 51 VyGeD~tt~rLE------~~vA~l~G------KEAgLFv-~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~ 117 (384)
T KOG1368|consen 51 VYGEDPTTNRLE------QRVAELFG------KEAGLFV-PSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQ 117 (384)
T ss_pred cccCCccHHHHH------HHHHHHhC------ccceeee-cccccccHHHHHHHhcCCCceEEeccchheeehhccChhh
Confidence 588889999999 99999986 4444555 45555566666664 558899999988776444 3455
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccC--------CeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTE--------KSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--------~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
..|+.+.++... .+.-+++++++++++. -+++|++.|.+|.+| .++|.+++.++.++|+++ ++.+..|
T Consensus 118 l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~-glkLH~D 194 (384)
T KOG1368|consen 118 LAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRH-GLKLHMD 194 (384)
T ss_pred hccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhcc-CCeeecc
Confidence 677787777765 4445899999999962 468999999976555 999999999999999999 9999999
Q ss_pred ccccccccCCCCccccccCCCCCCceEEEeccccccccccceeE-EEEcChhHHHHHHhhhhccccCCChHHHHHHHHHh
Q 018665 150 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVAACNKIQSQFTSGASSISQKAGVAAL 228 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 228 (352)
.+.-+-..... ..++..+....+ -+--.+||.+|.| +| .++++.+++++.+..+...+.+.-..+..++++..
T Consensus 195 GARi~NAavas-gV~vk~i~~~fD--SVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLv 268 (384)
T KOG1368|consen 195 GARIFNAAVAS-GVPVKKICSAFD--SVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALV 268 (384)
T ss_pred hhhhhhHHHHc-CCCHHHHHHhhh--hhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 98654322111 123333322112 1233578988733 44 55689999999887766666677666666666655
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 229 GLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
.. .+... ....-.++...+.+.++..+++.+-.+ ....++.+.+.... .+++.+++.+.+. ||
T Consensus 269 al----~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~----------~~~~~l~~~~~k~-gi 332 (384)
T KOG1368|consen 269 AL----DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQAR----------LTAEELCKFLEKN-GI 332 (384)
T ss_pred Hh----hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeeccccc----------CCHHHHHHHHHHC-Ce
Confidence 53 23333 445556677778888888766777655 33444555443221 2899999998865 99
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHH-HHHHhhh
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERI-KKGLLTL 346 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l-~~~~~~~ 346 (352)
.+..+. ...+|+.+++ +.++++..+..+ +.++.++
T Consensus 333 ~lm~~~----s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 333 LLMGGA----SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred EEeecc----ccceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 998864 4458999998 999999999999 5554443
No 276
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.86 E-value=6.9e-19 Score=157.75 Aligned_cols=309 Identities=15% Similarity=0.151 Sum_probs=212.1
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH-HHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~-~~~~g~ 82 (352)
|+.++.+.+++ +.++++++ .++++.+++++.|++.+....+++||.| +.+.|...... ....|.
T Consensus 67 yag~~s~~~lE------~~va~~~G-------~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Ga 131 (450)
T TIGR02618 67 YAGSRNFYHLE------RTVRELYG-------FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGA 131 (450)
T ss_pred hcCCCcHHHHH------HHHHHHHC-------CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCe
Confidence 77778888888 99999985 6789999999999998776778999976 77777555544 688888
Q ss_pred eEEEecccC--------CCCcccCHHHHHhhccC----CeeEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 83 TPVILPTRI--------SENFLLDPKVLESKLTE----KSRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 83 ~v~~i~~~~--------~~~~~~d~~~l~~~l~~----~~~~i~i~~p~n-ptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
.++-++.++ ..++.+|+++|++++++ +++++.+++++| .+|+++|.+.++++.++|+++ |+.+|.|
T Consensus 132 v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~-Gl~vi~D 210 (450)
T TIGR02618 132 TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAH-GIKVFYD 210 (450)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHc-CCEEEEE
Confidence 655554331 23466899999999975 345677888877 458999999999999999999 9999999
Q ss_pred ccccc-ccc------CCCCccccc----cCCCCCCceEEEeccccccccccceeEEEE-cChhHHHHHHhhhhccc----
Q 018665 150 EIYEH-IIY------APATHTSFA----SLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFT---- 213 (352)
Q Consensus 150 ~~~~~-~~~------~~~~~~~~~----~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~-~~~~~~~~~~~~~~~~~---- 213 (352)
.++.. ..+ .+....+.. .+.. .-+.++.|..|..+.+- .|+++ .+++++++++.....+.
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~--~aD~~~~S~~Kd~~~~~--GG~l~~~d~~l~~k~r~~~~~~eG~~t 286 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEMMS--YADGCTMSGKKDCLVNI--GGFLCMNDDEMFQSAKELVVVFEGMPS 286 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHHhc--cCcEEEEeeccCCCCCC--ceEEEeCCHHHHHHHHHHhhhcCCccc
Confidence 99875 111 112223331 1111 12258888889876441 25555 57889888877643321
Q ss_pred -cCCChHHHHHHHHHhcccCCChHHHH-HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecC----CccCCcccC
Q 018665 214 -SGASSISQKAGVAALGLGYAGGEVVS-KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS----TYYGSEAEG 287 (352)
Q Consensus 214 -~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~----~~~~~~~~~ 287 (352)
.+.+.-.+.+++.++.. ..+ ...++-....++|.+.|.+. |+.++.|.+|..++++.. ......
T Consensus 287 yGgla~r~~~ala~gL~e------~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~~~--- 356 (450)
T TIGR02618 287 YGGLAGRDMEAMAIGIRE------AVDYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQDQ--- 356 (450)
T ss_pred cCchhhhhHHHHHHHHHH------hhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCChhh---
Confidence 22344444444545543 222 22222333467888888888 999988888988888753 332222
Q ss_pred CCCCCChHHHHHHHHHccCEEecc-CCCC-C-C----------CCeEEEEeec---CHHHHHHHHHHHHHHHhhh
Q 018665 288 FGKIENSESLCRYLLDKAQVALVP-GDAF-G-D----------DTCIRISYAA---SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 288 ~~~~~~~~~~~~~l~~~~gi~i~~-g~~~-~-~----------~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~ 346 (352)
+ .+..++.+|....||--.- |+.. + . -..+|+.++. |.+.++...+.|..+.++-
T Consensus 357 ~----p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 357 F----PAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred C----hHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 2 6788999999888874222 2221 1 1 1479999987 8899999999998887653
No 277
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.86 E-value=6.6e-20 Score=164.88 Aligned_cols=280 Identities=10% Similarity=0.056 Sum_probs=199.3
Q ss_pred HHHHHHHHhcCCCC-CCCcE-EEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSY-TPDQI-LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~-~~~~i-~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ . +..++ +++++++.+++.++..++.+++++++.....++.+ ..++..|.. +.+..+...+ .
T Consensus 55 ~~l~~l~~-----~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~ 127 (360)
T PRK05355 55 ADLRELLN-----IPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-F 127 (360)
T ss_pred HHHHHHhC-----CCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-C
Confidence 66666664 3 22345 55588889999999999999988887776665544 688888965 6666543122 2
Q ss_pred cCHHHHHh-hccCCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 97 LDPKVLES-KLTEKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 97 ~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.+..++++ .+++++++|.+++..+.||... + +.+| + |+++|+|.+++. |..+..+.. .+
T Consensus 128 ~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~---i~~i------~-g~l~vVDavss~----g~~~idv~~----~d- 188 (360)
T PRK05355 128 TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHE---LPDT------G-DVPLVADMSSDI----LSRPIDVSK----FG- 188 (360)
T ss_pred CCCCChhhccCCCCCCEEEEccCCCcceEecCc---cccc------C-CCcEEEEcCccc----cCccCCHHH----cc-
Confidence 34444444 7777899999999999999998 5 5555 8 999999999886 333333332 23
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhh-----------h-hccccCCChHHHHHHHHHhcccCCChH-HHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-----------Q-SQFTSGASSISQKAGVAALGLGYAGGE-VVSKM 241 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 241 (352)
+++.|.+|.+|.+ ++|++++++++++++... . ....+++|.....++.++++.. ..+ .++.+
T Consensus 189 -~~~~ssqK~lgP~--Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i--~~~gG~e~i 263 (360)
T PRK05355 189 -LIYAGAQKNIGPA--GLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWL--KEQGGVAAM 263 (360)
T ss_pred -EEEEeccccccCC--ceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHH--HHccCHHHH
Confidence 8899999999843 589999999888775431 1 1223678888999999888862 234 58899
Q ss_pred HHHHHHHHHHHHHHhcccCCceecC---CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSE---PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 318 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~ 318 (352)
.++.++..+++++.|++++.+..+. .+.+..+.+.+|+.. ...++.+.+.++ |+.+.++.. ..
T Consensus 264 ~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~-----------~~~~~~~~~~~~-Gi~~~~~~~--~~ 329 (360)
T PRK05355 264 EKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEE-----------LDKKFLAEAKAA-GLVGLKGHR--SV 329 (360)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChH-----------HHHHHHHHHHHC-CCcccCCCC--cc
Confidence 9999999999999999984322222 123344666666531 345666666654 888866642 35
Q ss_pred CeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 319 TCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 319 ~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
+.+|+|+.. +.+|++++++.|+++++.
T Consensus 330 g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 330 GGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 899999987 899999999999998764
No 278
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.86 E-value=6.1e-20 Score=156.93 Aligned_cols=292 Identities=15% Similarity=0.178 Sum_probs=217.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
+.+|+++. ++.-++.++.--|++..+.+|.+ +|..|......|-+++...+..++.-..+.. + |
T Consensus 223 ~eLA~LHq-------K~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH----N---D 288 (570)
T KOG1360|consen 223 AELADLHQ-------KEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH----N---D 288 (570)
T ss_pred HHHHHHhc-------CcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeecc----C---C
Confidence 88888884 44444555555666666666643 6778888888999999999999988777653 2 7
Q ss_pred HHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 99 PKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 99 ~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
++.|++.+. .-+++|....+++.+|.+.| +++|++++++| |.+.++||++.-..|...+..--..-.-.+..
T Consensus 289 ~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcDvah~y-GAiTFlDEVHAVGlYG~rGaGvgerdGvm~kv 364 (570)
T KOG1360|consen 289 LDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCDVAHKY-GAITFLDEVHAVGLYGPRGAGVGERDGVMHKV 364 (570)
T ss_pred HHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHHHHHHHHHh-CceeeeehhhhhccccCCCCCccccCCcchhh
Confidence 888888774 36788889999999999999 99999999999 99999999998766654432222211222345
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc--ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+|+.+++.|+||+-| ||+.+...+++.++++...| +.+.+++.+..+..+...- ..+.-+.++..-+++..++
T Consensus 365 DiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~l--k~~eg~~lR~~hqrnv~~~ 439 (570)
T KOG1360|consen 365 DIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRIL--KSEEGRVLRRQHQRNVKYV 439 (570)
T ss_pred hhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHH--hhhhhHHHHHHHHHHHHHH
Confidence 588999999999777 99999999999999886544 4456666666666666541 1233356667778888999
Q ss_pred HHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---CCCeEEEEeec--
Q 018665 253 VKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA-- 327 (352)
Q Consensus 253 ~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~~~~iRi~~~~-- 327 (352)
++.|.+. |+.++++.+-+ +-+.+.+.. .+.++.+.|..++||++..-.... ....+||.+..
T Consensus 440 kq~l~~~-GiPVi~~pSHI-iPv~vgda~-----------l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~H 506 (570)
T KOG1360|consen 440 KQLLMEL-GIPVIPNPSHI-IPVRVGDAA-----------LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHH 506 (570)
T ss_pred HHHHHHc-CCcccCCCcce-eeeeccCHH-----------HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCC
Confidence 9999998 99998765554 555554431 467888999999999998755433 24579998876
Q ss_pred CHHHHHHHHHHHHHHHhhhCC
Q 018665 328 SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+.+.++.+++.+.++-.++..
T Consensus 507 T~~mm~~lv~~l~~vw~~v~l 527 (570)
T KOG1360|consen 507 TPQMMNILVNALLDVWNEVGL 527 (570)
T ss_pred CHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999998887754
No 279
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.86 E-value=4.1e-19 Score=160.65 Aligned_cols=281 Identities=18% Similarity=0.283 Sum_probs=190.2
Q ss_pred hhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcc
Q 018665 18 SFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 18 ~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+|++.+++++ ..++++.++|+|.|+..++.++ .++||+|++|..+|..+..++...|.+++++++++ +++.
T Consensus 29 ~fE~~~a~~~-------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~-~~~~ 100 (363)
T PF01041_consen 29 EFEKEFAEYF-------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDP-ETLN 100 (363)
T ss_dssp HHHHHHHHHH-------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BET-TTSS
T ss_pred HHHHHHHHHh-------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccC-CcCC
Confidence 4669999998 4889999999999999999998 47899999999999999999999999999999985 5678
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc-CCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY-APATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~-~~~~~~~~~~~~~~~~~~ 175 (352)
+|++.+++++++++++|++.+. .|...+ +++|.++|+++ |+++|+|.+++.... .| ...... -+
T Consensus 101 id~~~~~~~i~~~t~ai~~~h~---~G~~~d---~~~i~~~~~~~-~i~lIeD~a~a~g~~~~g---~~~G~~-----gd 165 (363)
T PF01041_consen 101 IDPEALEKAITPKTKAILVVHL---FGNPAD---MDAIRAIARKH-GIPLIEDAAQAFGARYKG---RPVGSF-----GD 165 (363)
T ss_dssp B-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHT-T-EEEEE-TTTTT-EETT---EETTSS-----SS
T ss_pred cCHHHHHHHhccCccEEEEecC---CCCccc---HHHHHHHHHHc-CCcEEEccccccCceeCC---EeccCC-----CC
Confidence 9999999999999999996554 467777 99999999999 999999999986432 22 112211 23
Q ss_pred EEEecc--ccccccccceeEEEEcC-hhHHHHHHhhhhc-----------------cccCCChHHHHHHHHHhcccCCCh
Q 018665 176 LTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQ-----------------FTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 176 i~~~s~--sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
+.+.|| +|.+. .| ..|+++++ +++.++++.+... ..+.++.+..+.+...|
T Consensus 166 ~~~fSf~~~K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL------- 236 (363)
T PF01041_consen 166 IAIFSFHPTKIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQL------- 236 (363)
T ss_dssp EEEEESSTTSSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHH-------
T ss_pred ceEecCCCCCCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHH-------
Confidence 777777 58885 44 34777664 5666666544321 11234444444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCC-CC----ce-EEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QG----AF-YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~----g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
+.+++..+.-+++.+.+.+.|.+++++..... .. .+ .+.+.+++... .+.+++.+.|.++ ||.+
T Consensus 237 ~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~---------~~rd~l~~~L~~~-GI~~ 306 (363)
T PF01041_consen 237 KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL---------ADRDELVEALRAR-GIET 306 (363)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC---------STHHHHHHHHHHT-TBEE
T ss_pred HHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc---------chHHHHHHHHHHC-CCcc
Confidence 34666677777888899999999888754421 11 11 23344443210 1578899998877 9988
Q ss_pred ccCCC-C-C------C----------------CCeEEEEeec--CHHHHHHHHHHHH
Q 018665 310 VPGDA-F-G------D----------------DTCIRISYAA--SLTTLQAAVERIK 340 (352)
Q Consensus 310 ~~g~~-~-~------~----------------~~~iRi~~~~--~~~~l~~~~~~l~ 340 (352)
.+... . . . ...+.+.+.. +++++++.++.|+
T Consensus 307 ~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 307 RPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp BCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred cccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 77541 0 0 0 0246666665 8899999988774
No 280
>PRK07482 hypothetical protein; Provisional
Probab=99.86 E-value=4.2e-19 Score=164.47 Aligned_cols=311 Identities=11% Similarity=0.045 Sum_probs=192.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc------C--CCCEEEecCCCCCChHHH-HHhcC----------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC------S--PGDEVIIPAPFWVSYPEM-ARIAD---------- 81 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~--~~~~vl~~~~~~~~~~~~-~~~~g---------- 81 (352)
..+|+.+...- +-.-+.+++++||++|++.+++... . ...+|+.....|++.... ....|
T Consensus 97 ~~lAe~L~~~~-p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~ 175 (461)
T PRK07482 97 ITLSKRIIDRA-PAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDL 175 (461)
T ss_pred HHHHHHHHHhC-CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCC
Confidence 55555554111 1124689999999999999998753 1 135788888888875422 11111
Q ss_pred --CeEEEecccCCCCc-----------ccCHHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCC
Q 018665 82 --ATPVILPTRISENF-----------LLDPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPR 143 (352)
Q Consensus 82 --~~v~~i~~~~~~~~-----------~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~ 143 (352)
..+..++.+..... ..+++.+++.+. +++.+|++...+...|.. .|.+.+++|.++|++| |
T Consensus 176 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~-g 254 (461)
T PRK07482 176 PIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY-D 254 (461)
T ss_pred CCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh-C
Confidence 11222322211000 013567777663 457788887777767766 5677999999999999 9
Q ss_pred EEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHh-------hhhccccC
Q 018665 144 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK-------IQSQFTSG 215 (352)
Q Consensus 144 ~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~-------~~~~~~~~ 215 (352)
+++|+||++.+|+..|.... ...... ..-+.+++|.++ +|. ++|.+++++++.+.+.. ....++++
T Consensus 255 iLlI~DEV~tGfGRtG~~~a-~~~~gv----~PDiv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 328 (461)
T PRK07482 255 ILLIADEVVTGFGRLGSMFG-SDHYGI----EPDLITVAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYS 328 (461)
T ss_pred CEEEEeccccCCCcCcchhh-HHhcCC----CCCEEEEccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCC
Confidence 99999999999977764222 122221 122555789998 785 99999999998887752 12445778
Q ss_pred CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCC-CCh
Q 018665 216 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI-ENS 294 (352)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 294 (352)
.|+++.+++.+.++.-.. ++..++..+.-....+.+.+.+++++.+.-+. ..|.++.+++.+....+ ..+... ...
T Consensus 329 gnpl~~Aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr-G~Glm~giel~~~~~~~-~~~~~~~~~~ 405 (461)
T PRK07482 329 GHPICAAAALANLDILER-ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVR-GVGMLAAVEFVADRDDR-TPFDPALKIG 405 (461)
T ss_pred cCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe-eceeEEEEEeccCCCcC-CCCChhhHHH
Confidence 999999999999875211 22333333333333344444334443333333 44566667764321100 000000 013
Q ss_pred HHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 295 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
..+...++++ |+.+.++. ..+.+|+.++. +++|+++++++|+++++++
T Consensus 406 ~~i~~~~~~~-Gvl~~~~~---~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 406 PQVSAAALER-GVIARAMP---HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred HHHHHHHHHC-CcEEecCC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5678888875 88886532 24678998765 9999999999999999765
No 281
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.86 E-value=1.2e-18 Score=161.08 Aligned_cols=291 Identities=14% Similarity=0.120 Sum_probs=181.9
Q ss_pred EEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-cC------------CeEEEecccCCCC--cc----c
Q 018665 39 ILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD------------ATPVILPTRISEN--FL----L 97 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~g------------~~v~~i~~~~~~~--~~----~ 97 (352)
+++++||++|++.+++... ....+|+.....|++....+.. .+ ..+..++.+.... +. .
T Consensus 105 ~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (442)
T TIGR00709 105 QFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEA 184 (442)
T ss_pred EEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchh
Confidence 5667999999999998753 2346788888888877643332 22 1123333321110 00 0
Q ss_pred CH----HHHHhhcc------CCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 98 DP----KVLESKLT------EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 98 d~----~~l~~~l~------~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
+. +.+++.+. +++.++++...++..| ..+|.+.++++.++|++| |+++|.||++.++.++|. .....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~-~~a~~ 262 (442)
T TIGR00709 185 GSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH-DIKLILDEVQAGFGRSGT-MFAFE 262 (442)
T ss_pred HHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCCc-hhHHH
Confidence 11 11233332 3667777777665555 457899999999999999 999999999999987774 22322
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
..... ++ +.+++|.++ .|+++|+++++++ ++.+.......+++.|++.++++.++++... + +.+.++.+
T Consensus 263 ~~gv~-PD---iv~~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~--~---~~l~~~~~ 331 (442)
T TIGR00709 263 HAGIE-PD---FVVMSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWK--D---DNLAQNAQ 331 (442)
T ss_pred HcCCC-Cc---EEEEccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHH--h---cCHHHHHH
Confidence 22221 22 334899998 6899999999888 4554333345678899999999999997511 1 23344555
Q ss_pred HHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCC-cccC-CC-CCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 247 ERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGS-EAEG-FG-KIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 247 ~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
++.+++.+.|++ .|.+.-+. ..|.++.+++.+.... .... .. .......+...++++ |+.+.+... ..+
T Consensus 332 ~~g~~l~~~L~~l~~~~~~v~~vr-G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~--~~~ 407 (442)
T TIGR00709 332 ERGERITSFLDDMIKEHPCIGNVR-GRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFEN-GLLLETGGR--EGE 407 (442)
T ss_pred HHHHHHHHHHHHHHHhCCCeeeee-ccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHC-CeEEeecCC--CCC
Confidence 555666666554 33232222 3466666766432100 0000 00 000245677777765 999876432 257
Q ss_pred eEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 320 CIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 320 ~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+|+.++. +++|++++++++.++++++
T Consensus 408 ~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 408 VFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 89998887 9999999999999999775
No 282
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.86 E-value=6.5e-19 Score=158.64 Aligned_cols=209 Identities=11% Similarity=0.171 Sum_probs=149.2
Q ss_pred hhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccCCC
Q 018665 18 SFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISE 93 (352)
Q Consensus 18 ~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~~ 93 (352)
+|++.++++.+ .+..+.++++++|+..++.+++++||+|+++.+.|.... ..+...|++++++++++..
T Consensus 68 ~lE~~la~leg-------~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 68 AFEEKYAVLEN-------AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHhC-------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 45599999874 567889999999999999999999999999988766655 5667899999999976323
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
.+.++ .+++++|++..|+||++.+.| +++|+++|+++ + +++|.+++. +....++. .+
T Consensus 141 ~~~l~--------~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~-~--lvVD~t~~s----~~~~~pl~-----~g 197 (384)
T PRK06434 141 SLDFD--------PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEN-D--VIVDATFAS----PYNQNPLD-----LG 197 (384)
T ss_pred heeec--------CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHc-C--eEEECCCCC----cccCCchh-----cC
Confidence 22221 136899999999999999998 99999999999 8 466999642 11111221 24
Q ss_pred ceEEEecccccccccc-ceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 251 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g-~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (352)
-++++.|.+|.++.+| .-.|.++. ++++.++++......+...+++....+...+ +.+..+.++.+++...
T Consensus 198 aDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL-------~tL~~R~~r~~~~a~~ 270 (384)
T PRK06434 198 ADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGL-------KTLGLRMEKHNKNGME 270 (384)
T ss_pred CCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCC-------CcHHHHHHHHHHHHHH
Confidence 4599999999996333 33566666 4556666665544444455655444444444 3456666777778888
Q ss_pred HHHHhcccCCce
Q 018665 252 LVKSFGELEGVK 263 (352)
Q Consensus 252 l~~~l~~~~g~~ 263 (352)
+.+.|++.|.+.
T Consensus 271 ~a~~L~~~p~v~ 282 (384)
T PRK06434 271 LARFLRDSKKIS 282 (384)
T ss_pred HHHHHHcCCCcc
Confidence 899998887663
No 283
>PRK06541 hypothetical protein; Provisional
Probab=99.86 E-value=9e-19 Score=162.06 Aligned_cols=297 Identities=12% Similarity=0.148 Sum_probs=188.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHHH-HHhcCC------------eEEEecccCCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPEM-ARIADA------------TPVILPTRISEN 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~~-~~~~g~------------~v~~i~~~~~~~ 94 (352)
.+.++++++|++|++.+++.... ...+|+....+|++.... +...+. .+..+|.+....
T Consensus 112 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 191 (460)
T PRK06541 112 LNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYR 191 (460)
T ss_pred cCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCcccc
Confidence 36899999999999999886421 136788888777766532 222111 122233221000
Q ss_pred ---cccC--------HHHHHhhcc----CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 95 ---FLLD--------PKVLESKLT----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 95 ---~~~d--------~~~l~~~l~----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
+..+ ++.+++.++ +++.+|++...++++|... |.+.+++|.++|+++ |+++|+||++.+++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~-g~llI~DEV~tGfGR~ 270 (460)
T PRK06541 192 APELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY-DVLLVSDEVICAFGRL 270 (460)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcC
Confidence 1112 356777664 3455566655588899875 588999999999999 9999999999887655
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHhhh----hccccCCChHHHHHHHHHhcccCC
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ----SQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
|... ........++ +.+++|.+| +|+ ++|++++++++++.+.... ..++++.|++..+++.+.++.-
T Consensus 271 G~~~-a~~~~gv~PD----ivt~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l-- 342 (460)
T PRK06541 271 GEMF-GCERFGYVPD----IITCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIF-- 342 (460)
T ss_pred chhh-hhhhcCCCCC----EEEeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHH--
Confidence 5421 1111111112 346899998 886 9999999999988875321 2346778889988888888751
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceec--CCCCceEEEeecCCccCCcccCCCCC--C--ChHHHHHHHHHccCE
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKI--E--NSESLCRYLLDKAQV 307 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~l~~~~gi 307 (352)
.-+.+.++++++.+++.+.|+++....++ ....|.++.+++.+....+. .+... . ....+.+.|+++ |+
T Consensus 343 ---~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~-Gi 417 (460)
T PRK06541 343 ---EREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKE-TFTDDESERLLRGFLSPALFEA-GL 417 (460)
T ss_pred ---HhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCccccc-CCcchhhhhhHHHHHHHHHHhC-Ce
Confidence 11234566777777777777665222221 22345556666632111000 00000 0 012566777765 99
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+.+.. . ....+|++++. +++|+++++++|.++++++..
T Consensus 418 ~~~~~~-~-g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 418 YCRADD-R-GDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred EEEecC-C-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 997631 1 24689999995 999999999999999987543
No 284
>PRK05965 hypothetical protein; Provisional
Probab=99.86 E-value=5.4e-19 Score=163.67 Aligned_cols=295 Identities=12% Similarity=0.123 Sum_probs=189.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHHH-HHhc---------C---CeEEEecccCC--
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPEM-ARIA---------D---ATPVILPTRIS-- 92 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~~-~~~~---------g---~~v~~i~~~~~-- 92 (352)
.+.++++++|++|++.+++.... ...+|+....+|++.... .... + ..+..++.+..
T Consensus 107 ~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (459)
T PRK05965 107 LNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYR 186 (459)
T ss_pred cCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccc
Confidence 46899999999999999986421 135788888888876532 2211 1 11223332211
Q ss_pred CCcccC--------HHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 93 ENFLLD--------PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 93 ~~~~~d--------~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
..+..| ++.+++.+. +++.++++...+...|.. +|.+.+++|.++|++| |+++|.||++.+|+.+|
T Consensus 187 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~-gillI~DEV~tGfGRtG 265 (459)
T PRK05965 187 NPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL-GILFVADEVITGFGRTG 265 (459)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhccCccCc
Confidence 001112 256676664 467788887777777765 5778999999999999 99999999999997776
Q ss_pred CCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHh-------hhhccccCCChHHHHHHHHHhccc
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~ 231 (352)
.. ........ ..-+.+++|.+| +| +++|.+++++++.+.+.. .....+++.|++..+++.+.++..
T Consensus 266 ~~-~a~~~~gv----~PDiv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l 339 (459)
T PRK05965 266 PL-FACEAEGV----VPDLMTVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLY 339 (459)
T ss_pred hh-hhHhhcCC----CCCeEEechhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHH
Confidence 42 22222221 122666789998 88 499999999999887753 234557789999999999998752
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcc---cCCceecCCCCceEEEeecCCccCCcccCCCC-CCChHHHHHHHHHccCE
Q 018665 232 YAGGEVVSKMVKAFRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQV 307 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi 307 (352)
. + +++.++.++.-+++.+.|++ .|.+.-+ ...|.++.+++........ .+.. ......+.+.++++ |+
T Consensus 340 ~--~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG~Gl~~gie~~~~~~~~~-~~~~~~~~~~~i~~~~~~~-Gl 411 (459)
T PRK05965 340 H--E---GGLLANGQKAGPRFAAGLDALRAHPLVGDV-RGRGLLGALELVADKATKT-PFDAALDPADRIFDRAYAN-GL 411 (459)
T ss_pred H--h---ccHHHHHHHHHHHHHHHHHhhccCCCEEEE-eecceEEEEEEeccccccC-CCCchhHHHHHHHHHHHhC-Ce
Confidence 1 1 12333444444555555544 3322222 2345556666632111000 0000 00145677777765 99
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
.+.+. ..+.+|+.++. +++|+++++++|.++++++...
T Consensus 412 l~~~~----g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~~ 451 (459)
T PRK05965 412 VFRAF----GDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLAD 451 (459)
T ss_pred EEEec----CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 98763 24678998876 9999999999999999887543
No 285
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.85 E-value=3.3e-19 Score=163.55 Aligned_cols=282 Identities=12% Similarity=0.063 Sum_probs=187.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChH-HHHHhcC-------------CeEEEecccCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYP-EMARIAD-------------ATPVILPTRISE 93 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~-~~~~~~g-------------~~v~~i~~~~~~ 93 (352)
-+.+++++++++|++.+++.... ...+|+.....|++.. .++...+ ..+..+|.+...
T Consensus 104 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 183 (429)
T PRK06173 104 LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIK 183 (429)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcc
Confidence 36899999999999999987431 2357888888887743 2221111 112233332110
Q ss_pred ---C-cccCHHHHHhhcc---CCeeEEEEcCC-CCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 94 ---N-FLLDPKVLESKLT---EKSRLLILCSP-SNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 94 ---~-~~~d~~~l~~~l~---~~~~~i~i~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
. ...+++.|++.+. +++.+++++.. +...|.. +|++.++++.++|++| |+++|+||++.+++.+|... .
T Consensus 184 ~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~-g~llI~DEv~tG~GrtG~~~-a 261 (429)
T PRK06173 184 FGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY-GVLLIFDEIATGFGRTGKLF-A 261 (429)
T ss_pred cchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc-CCeEEecchhcCCCcCCcch-H
Confidence 0 0114666777774 46778888774 7777765 6788999999999999 99999999998876655421 1
Q ss_pred cccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHh-----hhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
.......+| +.+++|.++ +| ++++.++.++++.+.+.. .....+++.+++..+++.++++.-. +
T Consensus 262 ~~~~gv~PD----iv~~gK~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~---~-- 331 (429)
T PRK06173 262 LEHAGVVPD----IMCIGKALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLL---E-- 331 (429)
T ss_pred HHhcCCCCC----EEEeehhhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH---h--
Confidence 111211112 334899997 78 489999999999887753 1233456688999999998887521 1
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceecC--CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 239 SKMVKAFRERRDFLVKSFGELEGVKMSE--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
+.+.++++++-+++.+.|+++.+...+. ...|.++.+.+.... ....+.+.|.++ |+.+.+.
T Consensus 332 ~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~-----------~~~~i~~~l~e~-Gi~v~~~---- 395 (429)
T PRK06173 332 SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV-----------NMATLQPRFVEH-GIWVRPF---- 395 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc-----------cHHHHHHHHHHC-CeEEEec----
Confidence 1234555556666666665431222221 134666667775421 457888888876 9999764
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+|+.++. +++|+++++++|++++.++
T Consensus 396 -g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 396 -GKLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred -CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 2589999987 9999999999999999765
No 286
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.85 E-value=7.2e-19 Score=159.77 Aligned_cols=295 Identities=20% Similarity=0.228 Sum_probs=201.8
Q ss_pred chhhHHHHHHHHhcCCCCCC-CcEEEeCChH-HHHHHHHHHhcC---CCCEEEecCCCCCChHHHHHhcCCeEEEecc-c
Q 018665 17 WSFVQQFVINLKENGLSYTP-DQILVSNGAK-QSILQAVLAVCS---PGDEVIIPAPFWVSYPEMARIADATPVILPT-R 90 (352)
Q Consensus 17 ~~~~~~ia~~~~~~~~~~~~-~~i~~~~g~~-~a~~~~~~~l~~---~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~-~ 90 (352)
.+|++.++++++ ++. +..++++++| .++..++.++.. +++.|+++..+|.+...++...|.+++.++. .
T Consensus 108 ~~~e~~~~~~~G-----~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~ 182 (444)
T TIGR03531 108 NKLVKDFLKLLG-----LRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVL 182 (444)
T ss_pred HHHHHHHHHHcC-----CCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeee
Confidence 345577777765 322 4688899999 577777777642 5789999999999999999999999999996 2
Q ss_pred CCCCcccCHHHHHhhccC---CeeEEEEcCCC-CCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 91 ISENFLLDPKVLESKLTE---KSRLLILCSPS-NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 91 ~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~-nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
+++++.+|++.|++++++ +..++++.+|+ ++.|...+ +++|+++|+++ |+++|+|++|+... ....
T Consensus 183 d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd---L~eIa~la~k~-gI~lIvDaAyg~~~------~~~~ 252 (444)
T TIGR03531 183 DGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD---IEEIAKICANY-DIPHIVNNAYGLQS------NKYM 252 (444)
T ss_pred cCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC---HHHHHHHHHHc-CCEEEEECcCcCcC------hhhh
Confidence 346788999999999975 45666666664 44455556 99999999999 99999999998521 1111
Q ss_pred cC---CCCCCc-eEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 167 SL---PGMWER-TLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 167 ~~---~~~~~~-~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.. ....++ .+++.|++|.+..++. .|.++. ++++++.+...... ...+.+.+.+...++.. ..+.++++
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g--~~~~s~~~~~~~~ll~~---G~~g~~~l 326 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPG--RASASPSLDVLITLLSL---GSKGYLEL 326 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccC--CCCChHHHHHHHHHHHh---CHHHHHHH
Confidence 11 000112 4778899999976664 444545 77888877654222 22445677777777765 46888999
Q ss_pred HHHHHHHHHHHHHHhccc---CCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE----eccCC
Q 018665 242 VKAFRERRDFLVKSFGEL---EGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA----LVPGD 313 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~---~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~----i~~g~ 313 (352)
.++..++++++.+.|+++ .|..++.. ....-+.+.+....+ .+...+...|..+ +|. |.++.
T Consensus 327 i~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~---------~~~~~~g~~l~~~-~v~g~r~v~~~~ 396 (444)
T TIGR03531 327 LKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKG---------KDPTMLGSMLYSR-RVTGPRVVTNGD 396 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccc---------cCHHHHHHHHHhC-CCCCceeecCCC
Confidence 999999999999988865 36666643 222323344332210 1677888888766 452 34444
Q ss_pred ----------CCCC------CCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 314 ----------AFGD------DTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 314 ----------~~~~------~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
.|+. ..|+-++.+. +.+|++.++++|.++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 397 SKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred ceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 1111 1355555544 889999999999875
No 287
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.85 E-value=2.9e-19 Score=148.09 Aligned_cols=314 Identities=15% Similarity=0.172 Sum_probs=229.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEE--EeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQIL--VSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEM 76 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~--~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~~~ 76 (352)
-|-|-.|.+.++ +..++.+- ....-++.+.++ -+-|||+|+.....-+ +. ...|.+..|+|..+..+
T Consensus 69 EYLpi~Gl~~F~------~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~i 141 (410)
T KOG1412|consen 69 EYLPILGLPTFT------KAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAI 141 (410)
T ss_pred hhccccCchhhh------hhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHH
Confidence 466777788888 88888876 333334445543 3467788887666544 33 35699999999999999
Q ss_pred HHhcC-CeEEEecccCCCCcccCHHHHHhhccCCe--eEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 77 ARIAD-ATPVILPTRISENFLLDPKVLESKLTEKS--RLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 77 ~~~~g-~~v~~i~~~~~~~~~~d~~~l~~~l~~~~--~~i~-i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
++..| ..+..++....+...+|++.+...+...+ ..++ ..+.|||||.-++.|.++.|++..++. +...+.|-+|
T Consensus 142 f~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k-~lf~fFDiAY 220 (410)
T KOG1412|consen 142 FEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSK-NLFPFFDIAY 220 (410)
T ss_pred HHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhc-Cceeeeehhh
Confidence 99999 56777887766777799999998886433 2333 345599999999999999999999999 9999999999
Q ss_pred cccccCCC-Ccc-ccccCCCCCCceEEEeccccccccccceeEEEEc---ChhHHH----HHHhhhhccccCCChHHHHH
Q 018665 153 EHIIYAPA-THT-SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVA----ACNKIQSQFTSGASSISQKA 223 (352)
Q Consensus 153 ~~~~~~~~-~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~ 223 (352)
.+|+-++- .+. .+.........+++.-||+|.+|+-+-|+|.+.. ++..+. ++....+.....|+..+...
T Consensus 221 QGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArI 300 (410)
T KOG1412|consen 221 QGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARI 300 (410)
T ss_pred cccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHH
Confidence 98865321 111 1122222234578999999999999999997652 444444 44444455556788888999
Q ss_pred HHHHhcccCCChHHHH---HHHHHHHHHHHHHHHHhccc--CC-ceecCCCCceEEEeecCCccCCcccCCCCCCChHHH
Q 018665 224 GVAALGLGYAGGEVVS---KMVKAFRERRDFLVKSFGEL--EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESL 297 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~--~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
+...|+.....++|.+ .+-.++++.|..|++.|..+ || |.-+..+.|+|-+-.+ ++ ..
T Consensus 301 V~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGL---------------tp-~q 364 (410)
T KOG1412|consen 301 VHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGL---------------TP-AQ 364 (410)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCC---------------CH-HH
Confidence 9999998655455544 34457788888899988876 55 6666778888766443 34 44
Q ss_pred HHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 298 CRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 298 ~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+++|.+++.|++.+.+ ||+++. ....+|...++|.++++.+..
T Consensus 365 V~~li~~h~vyLl~~G--------RInisGLN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 365 VDHLIENHKVYLLSDG--------RINISGLNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred HHHHHHhceEEEecCC--------cEeeeccccccHHHHHHHHHHHHHhhcc
Confidence 5778888889988766 999998 778899999999999887654
No 288
>PLN03032 serine decarboxylase; Provisional
Probab=99.85 E-value=6.9e-19 Score=157.40 Aligned_cols=277 Identities=15% Similarity=0.106 Sum_probs=194.1
Q ss_pred HHHHHHHHhcCCCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i--~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .+++++ ++|+|+|+++..++.... .++..|+++...|.+...+++..|..+..+|++. ++.
T Consensus 73 ~~ia~llg-----~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~ 145 (374)
T PLN03032 73 DWFARLWE-----LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLP--SGE 145 (374)
T ss_pred HHHHHHhC-----CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCC--CCc
Confidence 55666665 556676 999999999998887653 2345899999999999999999999999999864 456
Q ss_pred cCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC-----EEEEecccccccccC--CCCccccc
Q 018665 97 LDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-----LLVLSDEIYEHIIYA--PATHTSFA 166 (352)
Q Consensus 97 ~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~~livD~~~~~~~~~--~~~~~~~~ 166 (352)
+|+++|++++++ ++.+++++..+|++|.+.| +++|+++|+++ | +++++|.+++++... .. .+.+
T Consensus 146 id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~-g~~~~~~~lHvDaA~gg~~~p~~~~-~~~~- 219 (374)
T PLN03032 146 IDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKEL-GYTEDRFYIHCDGALFGLMMPFVSR-APEV- 219 (374)
T ss_pred CcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHh-CCCCCCeeEEEEccchhhhhhccCC-Cccc-
Confidence 999999999975 4677888888999999999 99999999998 7 589999999864221 10 0001
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcc-----ccCC--ChHHHHHHHHHhcccCCChHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF-----TSGA--SSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
... .+-+.+..|.||..| ...++|.++.+++.++.+.....+. +... +......+...+.. .+.+.+.
T Consensus 220 ~~~--~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~--~G~~g~~ 294 (374)
T PLN03032 220 TFR--KPIGSVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRR--KGYRGIK 294 (374)
T ss_pred CCC--cCCcEEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHH--hCHHHHH
Confidence 111 124467889999987 4567899998887776553221111 1222 22333344444433 2467888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+..++.-++.+++.+.|++. ++.+...+..+.+.+..|. .+ .+.+ |..+.+ .+.
T Consensus 295 ~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~--------------~~----~~~~--~w~l~~-----~~~ 348 (374)
T PLN03032 295 RDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPM--------------DE----AFIK--KWQLAC-----EGD 348 (374)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCC--------------cH----hHhh--eeeecc-----cCC
Confidence 99999999999999999987 7776544444445555442 11 1232 455543 245
Q ss_pred eEEEEeec--CHHHHHHHHHHHHH
Q 018665 320 CIRISYAA--SLTTLQAAVERIKK 341 (352)
Q Consensus 320 ~iRi~~~~--~~~~l~~~~~~l~~ 341 (352)
++|+++.. +.+.++++++.|++
T Consensus 349 ~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 349 IAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EEEEEECCCCCHHHHHHHHHHHhc
Confidence 89998876 77889999988865
No 289
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.85 E-value=2.4e-18 Score=160.35 Aligned_cols=292 Identities=11% Similarity=0.054 Sum_probs=184.5
Q ss_pred CcEEEeCChHHHHHHHHHHhc------C--CCCEEEecCCCCCChH-HHHHhcCCe------------EEEecccCCCCc
Q 018665 37 DQILVSNGAKQSILQAVLAVC------S--PGDEVIIPAPFWVSYP-EMARIADAT------------PVILPTRISENF 95 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~------~--~~~~vl~~~~~~~~~~-~~~~~~g~~------------v~~i~~~~~~~~ 95 (352)
+.++++++|++|++.+++... . ...+|+..+..|++.. ..+...|.. +..++.+....+
T Consensus 152 ~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~ 231 (504)
T PLN02760 152 GKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRF 231 (504)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCccccc
Confidence 579999999999999998763 1 1357888877777654 333322221 112222110000
Q ss_pred -----------ccCHHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 96 -----------LLDPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 96 -----------~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
....+.+++.+. +++.+|++.......|.. .|.+.+++|.++|++| |+++|+||++.+|+..|
T Consensus 232 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~-g~lLI~DEV~TGfGRtG 310 (504)
T PLN02760 232 HLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY-DILFIADEVICAFGRLG 310 (504)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEecchhhCCcccc
Confidence 001234555552 356777777777777865 5678999999999999 99999999999887776
Q ss_pred CCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh-------hhccccCCChHHHHHHHHHhccc
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~ 231 (352)
.. .......- ..-+.+++|.+| +| +++|.+++++++++.+... .+.++++.|++..+++.+.|+..
T Consensus 311 ~~-~a~e~~gv----~PDivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i 384 (504)
T PLN02760 311 TM-FGCDKYNI----KPDLVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIY 384 (504)
T ss_pred hh-hHHHhcCC----CCcEEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHH
Confidence 52 22222221 123677899998 66 4899999999998887531 34567788999999999999752
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 232 YAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
.. +++.++.+++-+++.+.|+++ +.+.-+. ..|.++.+++.+........-........+.+.++++ |+.
T Consensus 385 ~~-----~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl 457 (504)
T PLN02760 385 KE-----RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIR-GTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKR-GML 457 (504)
T ss_pred Hh-----CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEE-eCceEEEEEEecCCcccccccchhHHHHHHHHHHHhC-CcE
Confidence 11 134445555555555555443 2222222 3355566666332110000000000144677777765 999
Q ss_pred eccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 309 LVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 309 i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.+. ...+|++++. +++||++++++++++++++.
T Consensus 458 ~~~~-----g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 458 VRVA-----GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred EEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8763 2578999884 99999999999999998763
No 290
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.85 E-value=3.4e-18 Score=157.98 Aligned_cols=288 Identities=13% Similarity=0.068 Sum_probs=186.0
Q ss_pred CcEEEeCChHHHHHHHHHHhc------C--CCCEEEecCCCCCChHH-HHHhcC------------CeEEEecccCCCCc
Q 018665 37 DQILVSNGAKQSILQAVLAVC------S--PGDEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRISENF 95 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~------~--~~~~vl~~~~~~~~~~~-~~~~~g------------~~v~~i~~~~~~~~ 95 (352)
+.++++++|++|++.+++... . ...+|+....+|++... ++...| ..+..++.+...+.
T Consensus 115 ~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 194 (453)
T PRK06943 115 GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGA 194 (453)
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcccc
Confidence 589999999999999998752 1 23678888888887552 222121 11223333321110
Q ss_pred ----------ccCHHHHHhhcc---CCeeEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 96 ----------LLDPKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 96 ----------~~d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
.-+++.+++.++ +++.+|++.. .+...|. ..|.+.++++.++|++| |+++|.||++.+++..|.
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~-gillI~DEV~TG~GRtG~ 273 (453)
T PRK06943 195 RPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY-GVHLIADEIAVGCGRTGT 273 (453)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc-CCEEEeechhhCCCCCcc
Confidence 013466777664 4777888877 3666676 46788999999999999 999999999999877664
Q ss_pred CccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHh------hhhccccCCChHHHHHHHHHhcccCC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
. ......... .-+.+++|.++ +| +++|.+++++++.+.+.. .....+++.|++..+++.+.|+.-..
T Consensus 274 ~-fa~~~~gv~----PDivt~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~ 347 (453)
T PRK06943 274 F-FACEQAGVW----PDFLCLSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE 347 (453)
T ss_pred h-hHHHhCCCC----CCeEeeehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 2 222222211 22556689998 88 599999999999887753 12445678899999999999886221
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
++.+++..+.-+..++.+.+. .+.+++.-+. ..|.++.+++....... ......+.+.+.++ |+.+.+.
T Consensus 348 -~~l~~~~~~~G~~l~~~L~~l-~~~~~v~~vr-G~Gl~~gvel~~~~~~~------~~~~~~i~~~~~~~-Gll~~~~- 416 (453)
T PRK06943 348 -DDVLARNARKSARLRAALAPL-AAHPQVRHLR-QRGTIFAFDVALDGDAA------RTFSRRFFEAALER-ELLLRPI- 416 (453)
T ss_pred -cCHHHHHHHHHHHHHHHHHHH-hcCCCEEeEe-ccccEEEEEEccCCCcc------hHHHHHHHHHHHHC-CcEEEec-
Confidence 222333333333333333332 2344554333 34555666664210000 00245677887765 8998763
Q ss_pred CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 314 AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 314 ~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+|++++. +++|+++++++|.++++++
T Consensus 417 ----g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 417 ----GTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred ----CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 2469999765 9999999999999999876
No 291
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.84 E-value=6.8e-19 Score=157.73 Aligned_cols=264 Identities=13% Similarity=0.110 Sum_probs=182.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-c-------CCe-----EEEecccCCCCcccCHH
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-A-------DAT-----PVILPTRISENFLLDPK 100 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~-------g~~-----v~~i~~~~~~~~~~d~~ 100 (352)
.+.+++++++++|++.+++... ...++|+....+|++....... . +.. +..++. .|++
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~ 153 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVE 153 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHH
Confidence 4689999999999999998753 2337899888888876533322 1 111 122221 2678
Q ss_pred HHHhhccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEe
Q 018665 101 VLESKLTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179 (352)
Q Consensus 101 ~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 179 (352)
.+++.+.+++++|++...+...|.. .|.+.++++.++|+++ |+++|+||++.++ ..|.. .......-. .-+.
T Consensus 154 ~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~-gillI~DEv~tG~-RtG~~-~a~~~~gv~----PDiv 226 (364)
T PRK04013 154 AAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDV-GALLIADEVQSGL-RTGKF-LAIEHYKVE----PDIV 226 (364)
T ss_pred HHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcC-CCCch-hHHHhcCCC----CCEE
Confidence 8999888888999888887766764 5677999999999999 9999999999987 66642 222222111 2256
Q ss_pred ccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc
Q 018665 180 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 259 (352)
Q Consensus 180 s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 259 (352)
+++|.+| +|+++|.++.++++. .....++++.|+...+++.+.++.-.. ++..++..+ . +. .+..
T Consensus 227 ~~gK~lg-gG~P~~a~~~~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~-~~l~~~~~~----~---l~-~l~~- 291 (364)
T PRK04013 227 TMGKGIG-NGVPVSLTLTNFDVE----RGKHGSTFGGNPLACKAVAVTLRILRR-ERLVEKAGE----K---FI-EIKG- 291 (364)
T ss_pred Eeccccc-CCceeEEEEeccccc----CCCcCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHH----H---HH-Hhcc-
Confidence 6789998 789999999887752 223556788999999999999886221 222222222 1 22 2222
Q ss_pred CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHH
Q 018665 260 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVE 337 (352)
Q Consensus 260 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~ 337 (352)
+.+.-+. ..|.++-+++.+ ....+.+.++++ |+.+.+. ..+.+|+.++. +++|++++++
T Consensus 292 ~~v~~vR-G~Gl~~gve~~~-------------~~~~i~~~~~~~-Gll~~~~----g~~vlr~~Ppl~it~~~i~~~~~ 352 (364)
T PRK04013 292 ERVVTTR-GRGLMIGIVLKK-------------PVGKYVEELQNR-GYLVHTA----GQRVIRLLPPLIISKDTMEEAKS 352 (364)
T ss_pred Ccceeee-eCcEEEEEEeCC-------------cHHHHHHHHHhC-CcEEeeC----CCCEEEEeCCcccCHHHHHHHHH
Confidence 2222222 346667777743 356788888876 8988663 24789999987 9999999999
Q ss_pred HHHHHHhhhC
Q 018665 338 RIKKGLLTLR 347 (352)
Q Consensus 338 ~l~~~~~~~~ 347 (352)
+|++++.++.
T Consensus 353 ~l~~~l~~~~ 362 (364)
T PRK04013 353 AIEGVINDIL 362 (364)
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 292
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=6.1e-18 Score=155.60 Aligned_cols=283 Identities=17% Similarity=0.225 Sum_probs=187.2
Q ss_pred hHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh---------cCCCCEEEecCCCCCChHHHHHhcCCeEEEeccc
Q 018665 20 VQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV---------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 90 (352)
Q Consensus 20 ~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---------~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~ 90 (352)
++.+|++++ .+++++++|+++++..++.++ +++||+|+++.++|..+...+...|.+++.++++
T Consensus 69 e~~lA~~~g-------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd 141 (438)
T PRK15407 69 EKKLAEFLG-------VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE 141 (438)
T ss_pred HHHHHHHhC-------CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 399999985 357999999999999988876 3789999999999999999999999999999987
Q ss_pred CCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCCCCccccccCC
Q 018665 91 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLP 169 (352)
Q Consensus 91 ~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~~~~~~~~~~~ 169 (352)
. .++.+|++.+++.+++++++|+++++ .|.+.+ +++|.++|+++ |+++|+|++++... +.|.. .....
T Consensus 142 ~-~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~d---l~~I~~la~~~-gi~vIeDaa~a~G~~~~g~~---~G~~g 210 (438)
T PRK15407 142 L-PTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFD---LAAVKAFCDKH-NLWLIEDNCDALGSTYDGRM---TGTFG 210 (438)
T ss_pred C-CcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhh---HHHHHHHHHHC-CCEEEEECccchhhhcCCee---eeccC
Confidence 4 45678999999999889999998775 456566 89999999999 99999999998532 22221 11111
Q ss_pred CCCCceEEEecc--ccccccccceeEEEEcChh-HHHHHHhhhhcc----------------------------------
Q 018665 170 GMWERTLTVNGF--SKAFAMTGWRLGYIAGPKH-FVAACNKIQSQF---------------------------------- 212 (352)
Q Consensus 170 ~~~~~~i~~~s~--sK~~g~~g~~~g~l~~~~~-~~~~~~~~~~~~---------------------------------- 212 (352)
++.+.|| +|.+. .|- .|+++++.+ +.+.++......
T Consensus 211 -----d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (438)
T PRK15407 211 -----DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTY 283 (438)
T ss_pred -----ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccc
Confidence 2556666 46675 443 488887654 444443322110
Q ss_pred -----ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCC-ceecC-CCC---ceE-EEeecCCcc
Q 018665 213 -----TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG-VKMSE-PQG---AFY-LFIDFSTYY 281 (352)
Q Consensus 213 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~~-~~~---g~~-~~~~~~~~~ 281 (352)
++.++.+..+.+... -+.+++..++-+++.+++.+.|..+++ +.... +.+ .++ +.+.+++..
T Consensus 284 ~~~G~n~rmsel~AAig~~q-------L~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 356 (438)
T PRK15407 284 SHLGYNLKITDMQAAIGLAQ-------LEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA 356 (438)
T ss_pred cccccccCccHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC
Confidence 011112112111111 344566667777778888888887764 22221 111 222 223443210
Q ss_pred CCcccCCCCCCChHHHHHHHHHccCEEeccCCC--------C-----C----C-------CCeEEEEeec--CHHHHHHH
Q 018665 282 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDA--------F-----G----D-------DTCIRISYAA--SLTTLQAA 335 (352)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~--------~-----~----~-------~~~iRi~~~~--~~~~l~~~ 335 (352)
+ .+.+++.+.|.++ ||.+.+... | . . ...+-+.+.. +++++++.
T Consensus 357 ~---------~~Rd~l~~~L~~~-GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i 426 (438)
T PRK15407 357 G---------FTRVELVKYLEEN-KIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYV 426 (438)
T ss_pred C---------CCHHHHHHHHHHC-CCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHH
Confidence 0 1578899998876 887643211 0 0 0 1235555544 88999999
Q ss_pred HHHHHHHHh
Q 018665 336 VERIKKGLL 344 (352)
Q Consensus 336 ~~~l~~~~~ 344 (352)
++.|+++++
T Consensus 427 ~~~i~~~~~ 435 (438)
T PRK15407 427 IEKIEEFFG 435 (438)
T ss_pred HHHHHHHHh
Confidence 999999875
No 293
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=2.7e-18 Score=158.67 Aligned_cols=290 Identities=16% Similarity=0.164 Sum_probs=184.1
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHH-HHHhcC-------------CeEEEecccCCCC--cc--
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPE-MARIAD-------------ATPVILPTRISEN--FL-- 96 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~-~~~~~g-------------~~v~~i~~~~~~~--~~-- 96 (352)
+.+++++||++|++.+++... ....+|+.....|++... ++...+ ..+..+|.+.... +.
T Consensus 114 ~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 193 (457)
T PRK05639 114 PKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGIN 193 (457)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccccccc
Confidence 689999999999999998753 234578888887777553 222111 1233444432110 00
Q ss_pred --cCH--------HHHHhhc------cCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 97 --LDP--------KVLESKL------TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 97 --~d~--------~~l~~~l------~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.+. +.+++.+ .+++.++++...+...|.. +|.+.+++|.++|++| |+++|+||++.++..+|
T Consensus 194 ~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~GrtG 272 (457)
T PRK05639 194 GYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH-GILLVMDEVQTGIGRTG 272 (457)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhccCcCc
Confidence 022 2344443 2467788887777777764 5688999999999999 99999999999886666
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
... ......-.+| +.+++|.+| +|.++|++++++++++. ......++++.++...+++.+.++.-. -+
T Consensus 273 ~~~-a~~~~gv~PD----iv~~gK~l~-gG~pi~av~~~~~i~~~-~~~~~~~T~~g~p~~~aaa~a~l~~l~-----~~ 340 (457)
T PRK05639 273 KWF-ASEWFEVKPD----LIIFGKGVA-SGMGLSGVIGRKELMDL-TSGSALLTPAANPVISAAAEATLEIIE-----EE 340 (457)
T ss_pred hHH-HHHhcCCCCC----EEEechhhc-CCCcceeEEehHHHHhh-cCCCcccCCCcCHHHHHHHHHHHHHHH-----Hc
Confidence 421 1111121112 334899998 78999999999999883 222234567789999988888887521 12
Q ss_pred HHHHHHHHHHHHHHHHhccc-C--CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGEL-E--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~-~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
++.++.+++-+++.+.|+++ . ++.......|.++.+.+-..... . .......+.+.++++ |+.+.+...
T Consensus 341 ~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~--~---~~~~~~~~~~~~~~~-Gv~~~~~g~-- 412 (457)
T PRK05639 341 NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGK--P---DPELTGKICWRAFEL-GLILPSYGM-- 412 (457)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCC--C---CHHHHHHHHHHHHhC-CeEEeecCC--
Confidence 33344444555555555442 1 22221223455566655321100 0 000245677888876 999866421
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
..+.+|+.++. +++|+++++++|+++++++.
T Consensus 413 ~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 413 FGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 25789999987 99999999999999998764
No 294
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.84 E-value=6.9e-18 Score=151.79 Aligned_cols=311 Identities=13% Similarity=0.115 Sum_probs=209.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH-HHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~-~~~~g 81 (352)
-|+.++.+.+++ +.++++++ .+.++.++++|.|++.+....+++||.| +..+|...... ....|
T Consensus 73 ~Yagd~s~~~LE------~~vAe~lG-------~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G 137 (460)
T PRK13237 73 AYAGSRNFYHLE------ETVQEYYG-------FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNG 137 (460)
T ss_pred hhcCCCcHHHHH------HHHHHHHC-------CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCC
Confidence 377788888888 99999985 5679999999999998766678889864 55545544433 67778
Q ss_pred CeEEEeccc--------CCCCcccCHHHHHhhccC----CeeEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 82 ATPVILPTR--------ISENFLLDPKVLESKLTE----KSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 82 ~~v~~i~~~--------~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
....-+..+ ...++.+|+++|++++++ ++.++.+..++|.. |++.|.+.++++.++|+++ |+.+|.
T Consensus 138 a~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~-Gl~Vi~ 216 (460)
T PRK13237 138 GIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKH-GIKVFF 216 (460)
T ss_pred cEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHc-CCEEEE
Confidence 754433211 124567999999999974 33456677777766 7999999999999999999 999999
Q ss_pred ccccccccc-------CCCCcccccc----CCCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhcc----
Q 018665 149 DEIYEHIIY-------APATHTSFAS----LPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF---- 212 (352)
Q Consensus 149 D~~~~~~~~-------~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~---- 212 (352)
|.++..... .+....+... +. ..-+.++.|++|.++.+ . .|++++ +++++++++.....+
T Consensus 217 DaAra~gna~fI~~re~~y~~~~i~ei~~e~~--s~aD~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~ 292 (460)
T PRK13237 217 DATRCVENAYFIKEREEGYQDKSIKEIVHEMF--SYADGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMP 292 (460)
T ss_pred ECcchhcChhhhcccccccCCCcHhHHhhhcc--CcCcEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCc
Confidence 999874210 1111222211 11 12337788899998633 2 366664 667888887663222
Q ss_pred -ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeec----CCccCCcccC
Q 018665 213 -TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF----STYYGSEAEG 287 (352)
Q Consensus 213 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~----~~~~~~~~~~ 287 (352)
..+.+.-.+.+++..+.... ..+++....+ ..++|.+.|.+. |+.++.|.+|.-++++. |......
T Consensus 293 tygg~~grd~~alAvgl~E~~-~~~y~~~ri~----~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~~~~--- 363 (460)
T PRK13237 293 SYGGMAGRDMEAMAIGIEESV-QYEYIEHRVG----QVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLPQDQ--- 363 (460)
T ss_pred CCCChhhhHHHHHHhHHHhhc-hHHHHHHHHH----HHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCCccc---
Confidence 22344445556665555422 1344444443 445788888776 99999999998888874 4333222
Q ss_pred CCCCCChHHHHHHHHHccCEEec-cCCCC-C-C----------CCeEEEEeec---CHHHHHHHHHHHHHHHhhh
Q 018665 288 FGKIENSESLCRYLLDKAQVALV-PGDAF-G-D----------DTCIRISYAA---SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 288 ~~~~~~~~~~~~~l~~~~gi~i~-~g~~~-~-~----------~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~ 346 (352)
+ .+..++.+|..+.||--. -|+.. + . -..+|+.++. |.+.++...+.|..+.+.-
T Consensus 364 ~----p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 364 F----PAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred C----hHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 2 678899999988887432 12211 1 0 1479999987 8899999999998887653
No 295
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.84 E-value=6.6e-18 Score=140.22 Aligned_cols=284 Identities=17% Similarity=0.178 Sum_probs=217.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCee
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSR 111 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~ 111 (352)
++....+..+++.+++.++-.+..+||+|++....-++.+ +.+++.|++|+.++.+ -+..+.++++.+.+. .+++
T Consensus 67 n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~--~G~~~~le~i~~~lsqh~p~ 144 (385)
T KOG2862|consen 67 NAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEAD--IGQAVPLEEITEKLSQHKPK 144 (385)
T ss_pred CCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecC--cccCccHHHHHHHHHhcCCc
Confidence 3456788888999999999999999999998876655544 7899999999999876 444589999999996 4889
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccce
Q 018665 112 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 191 (352)
Q Consensus 112 ~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~ 191 (352)
++++++..+.||...|. ++..-++|++| +.+++||.+.+-. . ..+ .+ ++++.++......|++| +..+
T Consensus 145 ~vfv~hgdsSTgV~q~~--~~~~g~lc~k~-~~lllVD~VaSlg----g--t~F-~m-DewgVDvaytgSQKaL~-aP~G 212 (385)
T KOG2862|consen 145 AVFVTHGDSSTGVLQDL--LAISGELCHKH-EALLLVDTVASLG----G--TEF-EM-DEWGVDVAYTGSQKALG-APAG 212 (385)
T ss_pred eEEEEecCccccccchH--HHHHHHHhhcC-CeEEEEechhhcC----C--ccc-ee-hhhcccEEEecchhhcC-CCCC
Confidence 99999999999999883 45566788899 9999999998742 1 111 12 23566677777889998 4446
Q ss_pred eEEEEcChhHHHHHHhhhh-----------------------ccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH
Q 018665 192 LGYIAGPKHFVAACNKIQS-----------------------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 248 (352)
Q Consensus 192 ~g~l~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 248 (352)
++.+..++...++++.... .+..+++....+.+.++|... .++.+++..++.++.
T Consensus 213 LsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I--~eeGL~~~~~rH~e~ 290 (385)
T KOG2862|consen 213 LSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALI--AEEGLENSWRRHREM 290 (385)
T ss_pred cceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 7888888887777653221 223467777888888888763 478899999999999
Q ss_pred HHHHHHHhcccCCceecC----CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEE
Q 018665 249 RDFLVKSFGELEGVKMSE----PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 324 (352)
Q Consensus 249 ~~~l~~~l~~~~g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~ 324 (352)
.+.++..|++. |++... ........+..|..+ |..+++.++..++++.+.-|-....+..+||.
T Consensus 291 s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~gv-----------Dw~dVv~~~~~~~~vei~gglg~~~gKv~RIG 358 (385)
T KOG2862|consen 291 SKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYGV-----------DWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIG 358 (385)
T ss_pred HHHHHHHHHHh-CccceecChhhccCcceeeecCCCC-----------CHHHHHHHHHHhcCEEeccccCCCcccEEEEE
Confidence 99999999987 766652 222333445666554 89999999998888887555444456799998
Q ss_pred eec---CHHHHHHHHHHHHHHHhhh
Q 018665 325 YAA---SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 325 ~~~---~~~~l~~~~~~l~~~~~~~ 346 (352)
+.. +-|.++..++.|+.++.+.
T Consensus 359 l~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 359 LLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred EeeccCCcHHHHHHHHHHHHHHhhc
Confidence 754 6699999999999998764
No 296
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=7e-18 Score=155.62 Aligned_cols=286 Identities=15% Similarity=0.155 Sum_probs=183.8
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHH-HhcCC-------------eEEEecccCCCC--cc--
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMA-RIADA-------------TPVILPTRISEN--FL-- 96 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~-~~~g~-------------~v~~i~~~~~~~--~~-- 96 (352)
+.++++++|++|++.+++... ...++|+.....|++....+ ...+. .+..++.+.... +.
T Consensus 116 ~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (441)
T PRK05769 116 KKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIE 195 (441)
T ss_pred CEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCC
Confidence 689999999999999998642 23467888888887766432 22211 123333321000 00
Q ss_pred -------cCHHHHHh-hc-----cCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 97 -------LDPKVLES-KL-----TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 97 -------~d~~~l~~-~l-----~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
.+++.+++ .+ .+++.+|++...+...|.. .|.+++++|.++|+++ |+++|+||++.++...|..
T Consensus 196 ~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~tG~gr~G~~- 273 (441)
T PRK05769 196 NPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY-GILLIDDEVQTGMGRTGKM- 273 (441)
T ss_pred chHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccce-
Confidence 01233555 22 2456777777767777875 4677899999999999 9999999999987666642
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
......... ++ +.+++|.+| +|+++|++++++++++... .....+++.+++.++++.++++. -+. ++.
T Consensus 274 ~a~~~~gv~-pD---ivt~~K~l~-~G~p~gav~~~~~i~~~~~-~~~~~T~~g~p~~~aaa~a~L~~----l~~--~~~ 341 (441)
T PRK05769 274 FAIEHFGVE-PD---IITLAKAIA-GGLPLGAVIGRAELMFLPP-GSHANTFGGNPVAAAAALATLEE----LEE--GLL 341 (441)
T ss_pred ehhhccCCC-CC---EEEEccccc-CCcccEEEEEehhhhhcCC-CCCCCCCCcCHHHHHHHHHHHHH----HHH--HHH
Confidence 122222211 22 235889998 7899999999998875432 23445667899999999999875 222 556
Q ss_pred HHHHHHHHHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 243 KAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
++.+++-+++++.|+++. ++.......|.++.+.+.+... ... ......+.+.++++ |+.+.+. ...
T Consensus 342 ~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~-~~~----~~~~~~~~~~~~~~-Gil~~~~----~~~ 411 (441)
T PRK05769 342 ENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRK-EPD----PKLRDKVLYEAFKR-GLLLLGA----GKS 411 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCc-ccc----HHHHHHHHHHHHhC-CcEEecC----CCC
Confidence 666666677777665431 2211112335566666632110 000 00245677777765 8998763 246
Q ss_pred eEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 320 CIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 320 ~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+|++++. +++|+++++++++++++++
T Consensus 412 ~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 412 AIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 89999887 9999999999999998764
No 297
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.84 E-value=4.4e-18 Score=148.93 Aligned_cols=209 Identities=15% Similarity=0.125 Sum_probs=161.4
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH----hcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~----~~g~~v~~i~~~~~~~~~ 96 (352)
+.+++.- ...+.+++++|..|+..++..++..|++|+..+.+|.++...++ .+|.+...+++.
T Consensus 84 ~~iaal~-------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~------ 150 (409)
T KOG0053|consen 84 SGIAALE-------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD------ 150 (409)
T ss_pred HHHHHHh-------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh------
Confidence 7777775 46679999999999999999999999999999999999887665 568888777653
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
+++.+++++++++++|++..|.||+..+.+ +++|+++|+++ |+++|||++++.... ..... .+-+|
T Consensus 151 -~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~-g~~vvVDnTf~~p~~-----~~pL~----lGADI 216 (409)
T KOG0053|consen 151 -DLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKY-GFLVVVDNTFGSPYN-----QDPLP----LGADI 216 (409)
T ss_pred -hHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhC-CCEEEEeCCcCcccc-----cChhh----cCCCE
Confidence 788899999999999999999999999999 99999999999 999999999875311 11111 24459
Q ss_pred EEeccccccccc-cceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMT-GWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 177 ~~~s~sK~~g~~-g~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
++.|.+|.+|.. ..=.|.++.+ +++..+++..+....+.++++......+-+.+ +.-+.++..++...+.+
T Consensus 217 V~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt-------l~lRi~~~~ena~~~A~ 289 (409)
T KOG0053|consen 217 VVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKT-------LHLRINKHSENALKIAL 289 (409)
T ss_pred EEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch-------hhhhHHHHHHHHHHHHH
Confidence 999999999523 3446677775 88999999888877788888887776666654 22233344445555666
Q ss_pred HhcccCCce
Q 018665 255 SFGELEGVK 263 (352)
Q Consensus 255 ~l~~~~g~~ 263 (352)
.|+..|.++
T Consensus 290 ~Le~~~~v~ 298 (409)
T KOG0053|consen 290 LLEAHPKVK 298 (409)
T ss_pred HhhhCCcee
Confidence 666555554
No 298
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.84 E-value=1.4e-19 Score=153.39 Aligned_cols=284 Identities=18% Similarity=0.231 Sum_probs=181.9
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCC------CCEEEecCCCCCChHHHHHhcCCeEEEecccCCC
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSP------GDEVIIPAPFWVSYPEMARIADATPVILPTRISE 93 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~------~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~ 93 (352)
+.|.+++. .-+...+...|++++|+|+.++.++.+|... .-+|+...|.|..|......+......+.=
T Consensus 50 ~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~G---- 125 (363)
T PF04864_consen 50 RQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAG---- 125 (363)
T ss_dssp HHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEE----
T ss_pred HHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccccc----
Confidence 99999998 6666667789999999999999999998432 247999999999998766544433222221
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
|.......-...+-.=++++||||.|.+ .+.++ +.. +..+|-|-+|..-.|+ .+....+
T Consensus 126 ----da~~~~~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~-~~k~I~D~AYYWPhyT--------pI~~~aD 184 (363)
T PF04864_consen 126 ----DASNFKNSDNPSPYIELVTSPNNPDGQL-----REAVL---NGS-SGKVIHDLAYYWPHYT--------PITAPAD 184 (363)
T ss_dssp ----ECCCGTT-S-CCGEEEEEESS-TTT-----------SS---TTT-EEEEEEE-TT-STTTS-----------S-B-
T ss_pred ----cHHhhccCCCCCCeEEEEeCCCCCcccc-----cchhc---CCC-Ccceeeeeeeeccccc--------ccCCCCC
Confidence 2222211111234455889999999988 33444 344 7888999998763332 2222235
Q ss_pred ceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhccc---CCC----hHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLG---YAG----GEVVSKMVKAF 245 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~----~~~~~~~~~~~ 245 (352)
.++.+.|+||..|.+|.|+||.+. ++++.+++..+....+.+.|.-.|.-+.+.|..- ... .+.+.--.+.+
T Consensus 185 ~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M 264 (363)
T PF04864_consen 185 HDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTM 264 (363)
T ss_dssp -SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHH
T ss_pred CceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHH
Confidence 569999999999999999999986 5567778888877888899999998888877651 110 13566667788
Q ss_pred HHHHHHHHHHhcccCCceec--C-----------CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 246 RERRDFLVKSFGELEGVKMS--E-----------PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 246 ~~~~~~l~~~l~~~~g~~~~--~-----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
++|++.|.+.+.+-..+... . ....-|.|++|... ...+..+.|. +.||..+.|
T Consensus 265 ~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e------------ed~DC~~~l~-~~~I~tr~G 331 (363)
T PF04864_consen 265 RERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE------------EDEDCYAVLR-EAKIITRSG 331 (363)
T ss_dssp HHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC------------GGSSHHHHHH-CTTEEEEEG
T ss_pred HHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc------------ccccHHHHHH-hCCcccCCC
Confidence 99999999998864222221 1 12344599999753 2344544444 679999999
Q ss_pred CCCCC-CCeEEEEeecCHHHHHHHHHHHHHH
Q 018665 313 DAFGD-DTCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 313 ~~~~~-~~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
..|+. +.++|||+-.++++++.++++|.+.
T Consensus 332 ~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 332 VLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp GGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred CccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 99974 6799999999999999999999764
No 299
>PRK12403 putative aminotransferase; Provisional
Probab=99.84 E-value=2.5e-18 Score=159.30 Aligned_cols=297 Identities=12% Similarity=0.085 Sum_probs=179.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CCC-CEEEecCCCCCChH-HHHHhcCCe-----------EEEecccCC--C
Q 018665 36 PDQILVSNGAKQSILQAVLAVC-------SPG-DEVIIPAPFWVSYP-EMARIADAT-----------PVILPTRIS--E 93 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~-------~~~-~~vl~~~~~~~~~~-~~~~~~g~~-----------v~~i~~~~~--~ 93 (352)
.+.++++++|++|++.+++... +++ ..|+.....|++.. ..+...+.. +..+|.+.. .
T Consensus 115 ~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~ 194 (460)
T PRK12403 115 YSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYAN 194 (460)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCccccc
Confidence 3789999999999999998763 222 34555555666543 343332221 222222110 0
Q ss_pred Cccc--------CHHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 94 NFLL--------DPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 94 ~~~~--------d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
.+.. +++.+++.+. +++.+|++...+...|.. .|.+.+++|.++|++| |+++|+||++.+++..|.
T Consensus 195 ~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGRtG~ 273 (460)
T PRK12403 195 GGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY-DVLLCADEVIGGFGRTGE 273 (460)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCch
Confidence 0001 1345555542 456777777777777865 5678999999999999 999999999998877664
Q ss_pred CccccccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHhh----hhccccCCChHHHHHHHHHhcccCCCh
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
.. ......-. ++ +.+++|.+| +|. ++|.+++++++.+.+... ...++++.|+...+++.++|+.-.. +
T Consensus 274 ~~-a~e~~gv~-PD---iv~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~-~ 346 (460)
T PRK12403 274 WF-AHEHFGFE-PD---TLSIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD-E 346 (460)
T ss_pred hh-hhhhcCCC-CC---eEEEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh-c
Confidence 22 21222221 22 334899998 785 999999999988877531 1345677999999999999876211 2
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCC-CCChHHHHHHHHHccCEEeccCC
Q 018665 236 EVVSKMV-KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 236 ~~~~~~~-~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
+.++++. ..-...++.+.+..++.+.+.-+. ..|.++.+++......... ... ......+.+.+.++ |+.+.+.
T Consensus 347 ~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-G~Gl~~gie~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-Gll~~~~- 422 (460)
T PRK12403 347 GVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQ-GAGLVAALQFAEDKATRKR-FANENDLAWRCRTIGFEE-GVIIRST- 422 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ecceEEEEEEccCcccccc-ccchhHHHHHHHHHHHhC-CEEEEec-
Confidence 2233332 333333444444444443233233 4456666666321110000 000 00122344555655 8998753
Q ss_pred CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 314 AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 314 ~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+.+|++++. +++|+++++++|+++++++.+
T Consensus 423 ----~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 423 ----LGRMIMAPALVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2468999988 999999999999999988754
No 300
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.1e-18 Score=148.51 Aligned_cols=211 Identities=14% Similarity=0.155 Sum_probs=155.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH----HHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~----~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+++|.+=+ .---+.+.|++.|+..++..+++.||+|+....-|.+.. ..++..|+++.+++.+
T Consensus 69 ~RiAaLEG-------G~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~------ 135 (426)
T COG2873 69 ERIAALEG-------GVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD------ 135 (426)
T ss_pred HHHHHhhc-------chhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC------
Confidence 77777743 334467789999999999999999999998888777655 4567899999999742
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|++++++++++++++|++..-.||.+.+.+ +++|+++|+++ ++++|||..+.. + +..-+-+++-.|
T Consensus 136 -d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~-gvpliVDNT~at--------p-yl~rP~~hGADI 201 (426)
T COG2873 136 -DPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRH-GVPLIVDNTFAT--------P-YLCRPIEHGADI 201 (426)
T ss_pred -CHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHc-CCcEEEecCCCc--------c-eecchhhcCCCE
Confidence 799999999999999999999999999999 99999999999 999999998764 1 222222356679
Q ss_pred EEeccccccccccceeEEEEcChhHHHHH----------------------------------HhhhhccccCCChHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAAC----------------------------------NKIQSQFTSGASSISQK 222 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~ 222 (352)
++.|.+|++|..|.-+|.++.+....+.- ....+..+.+.+++..-
T Consensus 202 VvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAf 281 (426)
T COG2873 202 VVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAF 281 (426)
T ss_pred EEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHH
Confidence 99999999987898888888643322211 00111222334444433
Q ss_pred HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec
Q 018665 223 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265 (352)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 265 (352)
.....+ +.+.-+.++..++...+.+.|++.|.+.++
T Consensus 282 l~lqGl-------ETL~LRmerH~~NA~~vA~~L~~HpkV~~V 317 (426)
T COG2873 282 LLLQGL-------ETLSLRMERHCENALKVAEFLENHPKVAWV 317 (426)
T ss_pred HHHhch-------hhhHHHHHHHHHhHHHHHHHHhcCCCeeee
Confidence 333332 334455556667788888899888776665
No 301
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=2.3e-18 Score=157.85 Aligned_cols=280 Identities=13% Similarity=0.088 Sum_probs=184.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHH-HHHhcC-------------CeEEEecccCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIAD-------------ATPVILPTRISE 93 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~-~~~~~g-------------~~v~~i~~~~~~ 93 (352)
-+.+++++++++|++.+++.... ...+|+.....|++... ++...+ ..+..+|.+...
T Consensus 100 ~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 179 (422)
T PRK05630 100 LDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVR 179 (422)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCccc
Confidence 36899999999999999986421 23578888888877543 222211 122333333111
Q ss_pred Ccc-cC----HHHHHhhccCCeeEEEEcCC-CCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 94 NFL-LD----PKVLESKLTEKSRLLILCSP-SNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 94 ~~~-~d----~~~l~~~l~~~~~~i~i~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
... -+ .+.+++.+.+++.+++++.. +...|.. +|.+.+++|.++|++| |+++|+||++.++...|... ...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~-g~llI~DEv~tG~GrtG~~~-a~~ 257 (422)
T PRK05630 180 GSSPQEISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH-DILLIADEIATGFGRTGELF-ATL 257 (422)
T ss_pred CCChHHHHHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEecceeCCCcCchhh-HHH
Confidence 100 01 24455555567888888774 7767765 5677899999999999 99999999998886655421 111
Q ss_pred cCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh------hhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
.....+| +.+++|.++ +| .++|++++++++.+.+... ....+++.|+...+++.++++.-.. .
T Consensus 258 ~~gv~PD----i~t~gK~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~-~---- 327 (422)
T PRK05630 258 AAGVTPD----IMCVGKALT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET-G---- 327 (422)
T ss_pred hcCCCCC----eeeeechhh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh-C----
Confidence 1111112 447899997 67 5899999999998877532 2345678999999999998876211 1
Q ss_pred HHHHHHHHHHHHHHHHhcc---cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
+..++.+++-+++.+.|++ .+.+.-+. ..|.++.+++.... .+..+.+.++++ |+.+.+.
T Consensus 328 ~~~~~~~~~g~~l~~~L~~l~~~~~v~~vR-g~Gl~~~ie~~~~~-----------~~~~~~~~~~~~-Gl~~~~~---- 390 (422)
T PRK05630 328 MWRKQVKRIEAELIAGLSPLAHLPGVADVR-VLGAIGVVEMEQPV-----------DMEEATQAAVDH-GVWLRPF---- 390 (422)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeeeee-ccccEEEEEECCcc-----------cHHHHHHHHHHC-CeEEEec----
Confidence 2233444444555554443 33333233 23666777775321 456788888876 9998763
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
.+.+|+.++. +++|+++++++|++++++
T Consensus 391 -g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 391 -GRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred -CCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 2689998887 999999999999999865
No 302
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.84 E-value=8.4e-18 Score=155.01 Aligned_cols=286 Identities=13% Similarity=0.108 Sum_probs=184.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHH-HHHhcC------------CeEEEecccCC--
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRIS-- 92 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~-~~~~~g------------~~v~~i~~~~~-- 92 (352)
-+.++++++|++|++.+++.... ...+|+.....|++... ++...| ..+..+|.+..
T Consensus 106 ~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~ 185 (442)
T PRK13360 106 LNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLA 185 (442)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhh
Confidence 36899999999999999886421 23578888888887642 221111 12233333210
Q ss_pred -CCccc--------CHHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 93 -ENFLL--------DPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 93 -~~~~~--------d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
..+.. .++.+++.+. +++.+|++...+...|.. .|.+.+++|.++|++| |+++|+||++.+++..
T Consensus 186 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~-g~llI~DEv~tG~Grt 264 (442)
T PRK13360 186 RNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH-GILLIFDEVITGFGRL 264 (442)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCC
Confidence 00110 1456677663 456777777777777876 5677899999999999 9999999999888666
Q ss_pred CCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh-------hhccccCCChHHHHHHHHHhcc
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
|... ........+| +.+++|.++ +| +++|.+++++++++.+... ...++++.+++..+++.++++.
T Consensus 265 G~~~-a~~~~gv~PD----ivt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~ 338 (442)
T PRK13360 265 GAPF-AAQYFGVTPD----LLTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDL 338 (442)
T ss_pred ccch-hhhhcCCCCc----eeeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 6431 1111111112 457899997 66 7899999999998876531 2345777899999999998875
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
-. + +.+.++.+++-+++.+.|+++ +.+.-+. ..|.+.-+.+....... ...+.++.+.+.++ ||
T Consensus 339 l~--~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vr-G~Gl~~~~~l~~~~~~~------~~~~~~~~~~l~~~-Gv 405 (442)
T PRK13360 339 YE--R---EGLLTRAARLAPYWEDALHSLRDAPHVIDIR-NLGLVGAVELAPRDGKP------GKRAYEVFLKCFEK-GL 405 (442)
T ss_pred HH--h---CCHHHHHHHHHHHHHHHHHHhhcCCCeeeee-ccceEEEEEEecCCCCc------chhHHHHHHHHHHC-Cc
Confidence 21 1 134455555666666666543 2222222 23444444442210000 01356788888876 99
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.++ .+.+|++++. +++|+++++++|.++++++
T Consensus 406 l~~~~-----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 406 MIRYT-----GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EEEec-----CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 98763 3579999876 9999999999999998754
No 303
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.84 E-value=1.7e-18 Score=158.69 Aligned_cols=280 Identities=13% Similarity=0.099 Sum_probs=184.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CCCCEEEecCCCCCChHHH-HHhcC-------------CeEEEecccCCC-
Q 018665 36 PDQILVSNGAKQSILQAVLAVC-------SPGDEVIIPAPFWVSYPEM-ARIAD-------------ATPVILPTRISE- 93 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~-------~~~~~vl~~~~~~~~~~~~-~~~~g-------------~~v~~i~~~~~~- 93 (352)
.+.+++++||++|++.+++... .+..+|+....+|++.... +...+ ..+..++.+...
T Consensus 103 ~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 182 (428)
T PRK07986 103 LECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRF 182 (428)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCccc
Confidence 3689999999999999998643 1236788888888775422 22111 112223322110
Q ss_pred --Cc-ccCHHHHHhhcc---CCeeEEEEcCC-CCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 94 --NF-LLDPKVLESKLT---EKSRLLILCSP-SNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 94 --~~-~~d~~~l~~~l~---~~~~~i~i~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.+ .-|++.+++.++ ++..+|++... +...|.. ++++.+++|.++|+++ |+++|+||++.+++..|... ..
T Consensus 183 ~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~-g~lLI~DEv~tG~GrtG~~f-a~ 260 (428)
T PRK07986 183 DGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE-GILLIADEIATGFGRTGKLF-AC 260 (428)
T ss_pred chhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCCCee-ee
Confidence 00 125677777774 35667777664 5556654 5678999999999999 99999999998876655421 11
Q ss_pred ccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh-----hhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....-.+| +.+++|.++ +| +++|.+++++++.+.+... ....+++.|++..+++.+.++.-.. .
T Consensus 261 ~~~gv~PD----i~t~gK~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~-~---- 330 (428)
T PRK07986 261 EHAGIAPD----ILCLGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES-G---- 330 (428)
T ss_pred cccCCCCC----EEEechhhh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-C----
Confidence 21211112 335899998 78 5999999999998887642 2345677899999999888875211 1
Q ss_pred HHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
++.++.+++-+++.+.|+++ +.+.-+. ..|.++.+++.... ....+.+.+.++ |+.+.+.
T Consensus 331 ~~~~~~~~~g~~l~~~l~~l~~~~~i~~vR-g~Gl~~~ve~~~~~-----------~~~~~~~~l~~~-Gl~~~~~---- 393 (428)
T PRK07986 331 DWQQQVAAIEAQLREELAPLRDAPMVADVR-VLGAIGVVETTRPV-----------NMAALQRFFVEQ-GVWIRPF---- 393 (428)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccceEEEEEeCCcc-----------cHHHHHHHHHHC-CcEEEec----
Confidence 23444555555555555543 3332222 23555666664321 456788888876 9998763
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
.+.+|+.++. +++|+++++++|.+++++
T Consensus 394 -g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 394 -GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 2589998876 999999999999999864
No 304
>PRK06062 hypothetical protein; Provisional
Probab=99.84 E-value=3.8e-18 Score=157.66 Aligned_cols=297 Identities=12% Similarity=0.110 Sum_probs=183.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHH-HHHhcCC-----------eEEEecccCCC--Ccc--c
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPE-MARIADA-----------TPVILPTRISE--NFL--L 97 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~-~~~~~g~-----------~v~~i~~~~~~--~~~--~ 97 (352)
.+.+++++|+++|++.+++... ....+|+.....|++... ++...+. .+..++.+... .+. .
T Consensus 112 ~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 191 (451)
T PRK06062 112 LSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATT 191 (451)
T ss_pred CCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCC
Confidence 3689999999999999998753 234578888777777653 3322221 11222222111 010 1
Q ss_pred C-------HHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 98 D-------PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 98 d-------~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
| ++.+++.++ +++.+|++...+...|.. +|.+.+++|.++|+++ |+++|+||++.+|+..|... ..
T Consensus 192 ~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGRtG~~~-a~ 269 (451)
T PRK06062 192 EEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH-GIVLIADEVMAGFGRTGKWF-AI 269 (451)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEeeccccCCCcCcHHH-HH
Confidence 2 566777774 356777777777777766 5678999999999999 99999999999886665421 11
Q ss_pred ccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHhh--hhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
....-. .-+.+++|.+| +|. ++|.+++++++++.+... ...++++.|+...+++.++|+.... ++..++..
T Consensus 270 ~~~gv~----PDi~t~gK~lg-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~ 343 (451)
T PRK06062 270 EHFGVV----PDLITFAKGVN-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE-EGIVENAA 343 (451)
T ss_pred HhcCCC----CCeeeechhhh-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHH
Confidence 112111 22667899998 784 999999999998877532 3445778899999999999976211 12222222
Q ss_pred HHH-HHHHHHHHHHhcccCCceecCCCCceEEEeecCCccC-Ccc-cCCC-CCCChHHHHHHHHHccCEEeccCCCCCCC
Q 018665 243 KAF-RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEA-EGFG-KIENSESLCRYLLDKAQVALVPGDAFGDD 318 (352)
Q Consensus 243 ~~~-~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~l~~~~gi~i~~g~~~~~~ 318 (352)
+.- ...++.|.+..++.+.+.-+. ..|.++.+++..... ... .... .......+.+.|+++ |+.+.+. .
T Consensus 344 ~~G~~~l~~~L~~l~~~~~~v~~vr-G~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~-----~ 416 (451)
T PRK06062 344 RIGAEVLGPGLRELAERHPSVGEVR-GLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKER-GLLPFVN-----G 416 (451)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEeEe-ccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHC-CcEEeec-----C
Confidence 211 123333433333343332233 335555666532110 000 0000 000134677888865 8987652 4
Q ss_pred CeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 319 TCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 319 ~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.+|++++. +++||++++++++++++++.
T Consensus 417 ~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 417 NRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 679998865 99999999999999998764
No 305
>PRK07481 hypothetical protein; Provisional
Probab=99.83 E-value=1.1e-17 Score=154.70 Aligned_cols=292 Identities=15% Similarity=0.158 Sum_probs=182.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHH-HHHhcC------------CeEEEecccCCC-
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRISE- 93 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~-~~~~~g------------~~v~~i~~~~~~- 93 (352)
-+.+++++||++|++.+++.... ...+|+.....|++... ++...+ ..+..++.+...
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYR 183 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccc
Confidence 36899999999999999986431 23578888888887553 222111 112223222100
Q ss_pred -Ccc-cCHHH--------HHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 94 -NFL-LDPKV--------LESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 94 -~~~-~d~~~--------l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
.+. .|++. +++.+. +++.+|++...+...|.. +|.+.++++.++|+++ |+++|.||++.++...
T Consensus 184 ~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~tGfGRt 262 (449)
T PRK07481 184 NPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH-GILLIADEVVTGFGRT 262 (449)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc-CCEEEEeehhhCcCcC
Confidence 011 13333 344332 467888887777777765 5777899999999999 9999999999998766
Q ss_pred CCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh-------hhccccCCChHHHHHHHHHhcc
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
|.... ...... ..-+.+++|.+| +| +++|.+++++++.+.+... ....+++.|++..+++.++++.
T Consensus 263 G~~~a-~~~~gv----~PDiv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~ 336 (449)
T PRK07481 263 GSWFG-SRGWGV----KPDIMCLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDI 336 (449)
T ss_pred chhhH-hhhcCC----CCCEEEEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 64211 111111 122566789998 78 5999999999998877531 3445678899999999999875
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCC-CCCChHHHHHHHHHcc
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKA 305 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 305 (352)
-. + +++.++.++.-+++.+.|++ .+-+.-+. ..|.++.+++......+.. .. .......+.+.++++
T Consensus 337 l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-G~Glm~gi~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 408 (449)
T PRK07481 337 VV--R---EDLPANAAKRGAYLLEGLQPLKERFELVGDVR-GKGLMLALDLVADKATREP-IDPSKGYANAVADVAREN- 408 (449)
T ss_pred HH--h---hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEe-ecceEEEEEecccccccCC-CCchhHHHHHHHHHHHhC-
Confidence 21 1 12333444444444444443 32222222 3356666666321100000 00 000234677777765
Q ss_pred CEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 306 QVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 306 gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
|+.+.+. .+.+|++++. +++|++++++.|.++++++.
T Consensus 409 Gvl~~~~-----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 409 GVLVRPS-----GTKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred CeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 9999774 2358999877 99999999999999998764
No 306
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.83 E-value=4.1e-18 Score=157.17 Aligned_cols=286 Identities=15% Similarity=0.147 Sum_probs=186.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHH-HHHhcC------------CeEEEecccC-CC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRI-SE 93 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~-~~~~~g------------~~v~~i~~~~-~~ 93 (352)
.+.+++++||++|++.+++.... ...+|+.....|++... ++...| ..+..+|.+. ..
T Consensus 109 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (445)
T PRK09221 109 LDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLP 188 (445)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCcccc
Confidence 36899999999999999986431 13578888888876542 221111 1223333321 00
Q ss_pred --Ccc--------cCHHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 94 --NFL--------LDPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 94 --~~~--------~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
.+. ...+.+++.++ +++.+|++...+...|.. .|.+.+++|.++|+++ |+++|+||++.+++..
T Consensus 189 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRt 267 (445)
T PRK09221 189 ENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH-GILLIFDEVITGFGRL 267 (445)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCCCcC
Confidence 000 01345666553 467778887778778875 4677899999999999 9999999999888666
Q ss_pred CCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHh-------hhhccccCCChHHHHHHHHHhcc
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
|... ........+| +.+++|.++ +| +++|.+++++++++.+.. ....++++.+++..+++.+.++.
T Consensus 268 G~~~-~~~~~gv~PD----i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~ 341 (445)
T PRK09221 268 GAAF-AAERFGVTPD----IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDI 341 (445)
T ss_pred chhh-HHHhcCCCCC----EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHH
Confidence 6421 1111211122 567899997 66 689999999998887643 12345677899999888888875
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
-. -+.+.++.+++-+++++.|+++ +.+.-+. ..|.+..+++...... . ...+.++.+.++++ |+
T Consensus 342 i~-----~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vr-g~Gl~~~v~~~~~~~~--~----~~~~~~~~~~~~~~-Gv 408 (445)
T PRK09221 342 YR-----EEDLFERAAELAPYFEDAVHSLKGLPHVIDIR-NIGLVAGIELAPRPGA--P----GARGYEAFMKCFEK-GL 408 (445)
T ss_pred HH-----hccHHHHHHHHHHHHHHHHHhhccCCCEEEEe-cCceEEEEEEeccccc--c----cchHHHHHHHHHHC-Ce
Confidence 21 1234556666777777777654 2222222 2355555555321000 0 01345788888876 89
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.++ .+.+|++++. +++|+++++++|++++.++
T Consensus 409 ~~~~~-----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 409 LVRYT-----GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEeec-----CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 98763 3589999876 9999999999999999764
No 307
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=5e-18 Score=157.09 Aligned_cols=291 Identities=13% Similarity=0.134 Sum_probs=183.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChH-HHHHhcCC------------eEEEecccCCCC--cc-c
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADA------------TPVILPTRISEN--FL-L 97 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~-~~~~~~g~------------~v~~i~~~~~~~--~~-~ 97 (352)
.+.+++++|+++|++.+++... ....+|+.....|++.. ..+...+. .+..++.+.... +. .
T Consensus 130 ~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06082 130 LNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDA 209 (459)
T ss_pred CCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCCh
Confidence 3689999999999999988653 23367887777777654 33332221 122233221000 00 0
Q ss_pred ------CHHHHHhhcc--CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCC
Q 018665 98 ------DPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 169 (352)
Q Consensus 98 ------d~~~l~~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~ 169 (352)
+++.+++.++ +++.+|++...++..+...|.+.+++|.++|++| |+++|+||++.+++..|... ......
T Consensus 210 ~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tG~GRtG~~f-a~e~~g 287 (459)
T PRK06082 210 DGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKH-NVLLIIDEIPNGMGRTGEWF-THQAYG 287 (459)
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchhh-HhHhhC
Confidence 1345666664 3667777777676656678889999999999999 99999999999887666421 111122
Q ss_pred CCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 248 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 248 (352)
.. ++ +.+++|.+| +| .++|.+++++++...+......++++.|++..+++.+.++.-. + +++.++.+++
T Consensus 288 v~-PD---iv~~gKgl~-gG~~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~--~---~~l~~~~~~~ 357 (459)
T PRK06082 288 IE-PD---ILCIGKGLG-GGLVPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIE--Q---EGLLEKVKAD 357 (459)
T ss_pred CC-CC---EEEeccccc-CCCCcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--h---cCHHHHHHHH
Confidence 11 22 334899998 67 5999999998876543221112577899999999999987521 1 1344455555
Q ss_pred HHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEE
Q 018665 249 RDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 324 (352)
Q Consensus 249 ~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~ 324 (352)
-+++.+.|++ ++.+.-+. ..|.++.+++........... .....+...++++ |+.+.+. ..+.+|++
T Consensus 358 g~~l~~~L~~l~~~~~~i~~vr-G~Gl~~~ve~~~~~~~~~~~~---~~~~~~~~~~~~~-Gvl~~~~----~~~~i~~~ 428 (459)
T PRK06082 358 SQFMRERLLEMKAKYPLIGDVR-GIGLLWGVELVTDRHTKERAY---DEAEAVLYRCLNN-GLSFKVS----QGNVIQLS 428 (459)
T ss_pred HHHHHHHHHHHHhhCCCeeeee-eccceeEEEEccCccccCccH---HHHHHHHHHHHhC-CCEEEec----CCCEEEEe
Confidence 5555555544 33222233 345556666642111000000 0145677777765 9988763 25789999
Q ss_pred eec--CHHHHHHHHHHHHHHHhhhC
Q 018665 325 YAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 325 ~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
++. +++|++++++++++++.++.
T Consensus 429 Ppl~it~~eid~~~~~l~~~l~~~~ 453 (459)
T PRK06082 429 PPLIITREELTQALAILEEAIAKIC 453 (459)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHh
Confidence 887 99999999999999998764
No 308
>PRK06105 aminotransferase; Provisional
Probab=99.83 E-value=5.7e-18 Score=156.88 Aligned_cols=293 Identities=11% Similarity=0.064 Sum_probs=185.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhc------C--CCCEEEecCCCCCChHHHH-HhcC------------CeEEEecccCCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVC------S--PGDEVIIPAPFWVSYPEMA-RIAD------------ATPVILPTRISEN 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~------~--~~~~vl~~~~~~~~~~~~~-~~~g------------~~v~~i~~~~~~~ 94 (352)
-+.++++++|++|++.+++... . ...+|+.....|++..... ...+ ..+..++.+....
T Consensus 109 ~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~ 188 (460)
T PRK06105 109 MSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYR 188 (460)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccc
Confidence 3689999999999999998742 1 2357888777777655322 2111 1122233221100
Q ss_pred c-----------ccCHHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 95 F-----------LLDPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 95 ~-----------~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
+ ....+++++.+. +++.+|++...+...|.. .|++.+++|.++|++| |+++|+||++.+++..
T Consensus 189 ~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~-~~llI~DEv~tG~GRt 267 (460)
T PRK06105 189 FGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY-DILLVADEVICGFGRT 267 (460)
T ss_pred cccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCeEEEeccccCCCcC
Confidence 0 001345666652 356777877777777765 5788999999999999 9999999999988776
Q ss_pred CCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh-------hhccccCCChHHHHHHHHHhcc
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
|... ....... ..-+.+++|.+| +| +++|.+++++++++.+... ...++++.|++..+++.+.|+.
T Consensus 268 G~~f-~~~~~~v----~PDi~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~ 341 (460)
T PRK06105 268 GNMF-GCETFGI----KPDILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAI 341 (460)
T ss_pred chhh-hHHhcCC----CCCeeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 6422 2222221 122667899998 66 6999999999998877532 1345778999999999998876
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcc---cCCceecCCCCceEEEeecCCccCCcccCCCC-CCChHHHHHHHHHccC
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQ 306 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~g 306 (352)
-.. . ++.++.++.-+++.+.|++ .+.+.-+. .-|.++.+++......+. .+.. ...+..+.+.++++ |
T Consensus 342 i~~-~----~l~~~v~~~g~~l~~~L~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~-~~~~~~~~a~~i~~~~~~~-G 413 (460)
T PRK06105 342 IEE-R----DLVGNAAERGARLQARLRALADHPLVGEVR-GVGLIAAVELVADKATKT-PFEPPGKVGARANAAAHEH-G 413 (460)
T ss_pred HHh-c----cHHHHHHHHHHHHHHHHHHhhcCCCeEEEE-ecceEEEEEEecCcccCC-CCCchhHHHHHHHHHHHHC-C
Confidence 221 2 3344444444455554443 33232222 335656666532110000 0000 00135677777765 9
Q ss_pred EEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 307 VALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 307 i~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+.+.+. .+.+|++++. +++|+++++++|.++++++..
T Consensus 414 vl~~~~-----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 414 VISRAM-----GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred eEEEec-----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 999763 3589999887 999999999999999987643
No 309
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=3.6e-18 Score=158.08 Aligned_cols=274 Identities=16% Similarity=0.071 Sum_probs=179.4
Q ss_pred CChHHHHHHHHHHhcCCCCEEEecCC---CCCChHHHHH---hcCCe----EEEecccCCCCcccCHHHHHhhcc-CCee
Q 018665 43 NGAKQSILQAVLAVCSPGDEVIIPAP---FWVSYPEMAR---IADAT----PVILPTRISENFLLDPKVLESKLT-EKSR 111 (352)
Q Consensus 43 ~g~~~a~~~~~~~l~~~~~~vl~~~~---~~~~~~~~~~---~~g~~----v~~i~~~~~~~~~~d~~~l~~~l~-~~~~ 111 (352)
.+|+.|+..++.+++++||+|+..+. .|.++..... ..... +..+..+. .+..+|+++|++.+. .+++
T Consensus 107 ~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~pk 185 (475)
T PLN03226 107 LSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRPK 185 (475)
T ss_pred CchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCCe
Confidence 78889999999999999999998553 3333322211 11121 11333332 345689999999886 4677
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccce
Q 018665 112 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 191 (352)
Q Consensus 112 ~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~ 191 (352)
+|++. .+ .+|...| +++|.++|+++ |+++++|++|...........+.. ...+++++|++|+++ |.+
T Consensus 186 lIv~~-~S-~~s~~~D---~a~i~~ia~~~-ga~LlvD~AH~~Gli~~~~~~~p~-----~~~Div~~t~hK~L~--GP~ 252 (475)
T PLN03226 186 LIIAG-AS-AYPRDWD---YARMRKIADKV-GALLMCDMAHISGLVAAQEAASPF-----EYCDVVTTTTHKSLR--GPR 252 (475)
T ss_pred EEEEe-cC-cCCCccC---HHHHHHHHHHc-CCEEEEEchhhhCcccCCCCCCCC-----CCCeEEEecCccccc--CCC
Confidence 66552 23 2677888 88999999999 999999999986433222111111 134589999999982 334
Q ss_pred eEEEEcChhHH-----------HH---HHhh-hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHh
Q 018665 192 LGYIAGPKHFV-----------AA---CNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 256 (352)
Q Consensus 192 ~g~l~~~~~~~-----------~~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 256 (352)
.|+++++++.. +. +... ...+..+++....+++.++++... ....++..+++.++.+++.+.|
T Consensus 253 Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~--~~~~~~~~~~~~~na~~L~~~L 330 (475)
T PLN03226 253 GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAM--TPEFKAYQKQVKANAAALANRL 330 (475)
T ss_pred ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHh--CcCHHHHHHHHHHHHHHHHHHH
Confidence 48888877543 21 1111 111334566666666666676421 2335667888999999999999
Q ss_pred cccCCceecCCC-CceEEEeec-CCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-----CCCeEEEEeec--
Q 018665 257 GELEGVKMSEPQ-GAFYLFIDF-STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRISYAA-- 327 (352)
Q Consensus 257 ~~~~g~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-----~~~~iRi~~~~-- 327 (352)
++. |+.++.+. ....+++++ +... +..++.+.|.+ .||.+..+...+ .++.+|+..+.
T Consensus 331 ~~~-G~~l~~~~t~~hi~lv~~~~~gi-----------~~~~~~~~L~~-~~I~~nk~~~p~~~~~~~~~giRiGt~~lt 397 (475)
T PLN03226 331 MSK-GYKLVTGGTDNHLVLWDLRPLGL-----------TGSRVEKVLDL-AHITLNKNAVPGDSSALVPGGVRIGTPAMT 397 (475)
T ss_pred HhC-CCEEEcCCCCCCEEEEEccCCCC-----------CHHHHHHHHHH-CCCEECCCCCCCCcccCCCCCcccCcHHHH
Confidence 986 99887542 245566776 3322 66777777665 589987664222 35678985432
Q ss_pred ----CHHHHHHHHHHHHHHHhh
Q 018665 328 ----SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 328 ----~~~~l~~~~~~l~~~~~~ 345 (352)
+++|++++.+.|.++++.
T Consensus 398 ~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 398 SRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred HCCCCHHHHHHHHHHHHHHHHH
Confidence 779999999999999974
No 310
>PRK07483 hypothetical protein; Provisional
Probab=99.83 E-value=1.2e-17 Score=154.08 Aligned_cols=303 Identities=10% Similarity=0.077 Sum_probs=185.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHH-HHHhcCC------------eEEEecccCCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIADA------------TPVILPTRISEN 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~-~~~~~g~------------~v~~i~~~~~~~ 94 (352)
.+.+++++|+++|++.+++.... ...+|+.....|++... .+...+. .+..++.+...+
T Consensus 90 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~ 169 (443)
T PRK07483 90 LEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYR 169 (443)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcccc
Confidence 36899999999999999986421 23568887777776642 3322111 112222221000
Q ss_pred cc---c--------CHHHHHhhcc----CCeeEEEEcCCCC-Ccc-cCCCHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 95 FL---L--------DPKVLESKLT----EKSRLLILCSPSN-PTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 95 ~~---~--------d~~~l~~~l~----~~~~~i~i~~p~n-ptG-~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
.. . .++++++.+. +++.+|++...+. ..| ..+|++.+++|.++|++| |+++|.||++.+++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~-gillI~DEV~tGfGR 248 (443)
T PRK07483 170 EQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY-GVLLILDEVMCGMGR 248 (443)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh-CCEEEEecceeCccc
Confidence 00 0 1245665452 4677777776664 345 456788999999999999 999999999999877
Q ss_pred CCCCccccccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHhh----hhccccCCChHHHHHHHHHhcccC
Q 018665 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
+|... ........ .-+.+++|.++ +|. ++|.+++++++.+.+... ...++++.|++..+++.+.++...
T Consensus 249 tG~~~-a~~~~gv~----PDiv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~ 322 (443)
T PRK07483 249 TGTLF-ACEEDGVA----PDLVTIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIA 322 (443)
T ss_pred CcHHH-HHhhcCCC----CCeeeehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 66421 11111111 22566789998 885 999999999998877532 244577899999999999987521
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
. ++..++..+.-...++.|.+.+++++.+.-+. ..|.++.+++.+.................+.+.++++ |+.+.+.
T Consensus 323 ~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vR-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~ 399 (443)
T PRK07483 323 E-DGLLANVRARGEQLRARLRERLGQHPHVGDIR-GRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR-GLMVYPM 399 (443)
T ss_pred h-cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEe-ecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC-CcEEEec
Confidence 1 23333333333333444444334443332223 3455566665321100000000000235677888876 8998764
Q ss_pred CCC--C-CCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 313 DAF--G-DDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 313 ~~~--~-~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
... + .++.+|+.++. +++|+++++++|++++.++..
T Consensus 400 ~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 400 GGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 321 1 14689998887 999999999999999987643
No 311
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.83 E-value=7.6e-18 Score=155.17 Aligned_cols=291 Identities=13% Similarity=0.152 Sum_probs=180.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHH-HHhcCCeEE--------EecccCCCC----cccCHH
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEM-ARIADATPV--------ILPTRISEN----FLLDPK 100 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~-~~~~g~~v~--------~i~~~~~~~----~~~d~~ 100 (352)
.+.+++++++++|++.+++... ....+|+.....|++.... +...+.... .++.....+ .-.|++
T Consensus 109 ~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 188 (428)
T PRK12389 109 LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIE 188 (428)
T ss_pred CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHH
Confidence 4789999999999999998653 2346788888878876533 322221110 000000000 002678
Q ss_pred HHHhhcc---CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 101 VLESKLT---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 101 ~l~~~l~---~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.+++.+. +++.++++....+..|... |.+.+++|.++|+++ |+++|+||++.++ ..+... ........ .
T Consensus 189 ~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~-Rt~~~~-a~~~~gv~----P 261 (428)
T PRK12389 189 ALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEA-GALVIYDEVITAF-RFMYGG-AQDLLGVE----P 261 (428)
T ss_pred HHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEcccccc-ccCcch-hhHHhCCC----C
Confidence 8888774 4677777777777778654 677899999999999 9999999999987 433211 11111111 2
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHh---hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
-+.+++|.+| +|+++|.+++++++++.+.. .....+++.|++..+++.+.++.-.. .+ +.++.+++-+++.
T Consensus 262 Divt~gK~lg-gG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~-~~----l~~~~~~~g~~l~ 335 (428)
T PRK12389 262 DLTALGKIIG-GGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ-EG----VYEKLDRLGAMLE 335 (428)
T ss_pred Ceeeechhhc-CCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc-cc----HHHHHHHHHHHHH
Confidence 2567899998 88999999999999888752 22345678999999999999886221 22 3444444555555
Q ss_pred HHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCC--CCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec
Q 018665 254 KSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA 327 (352)
Q Consensus 254 ~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~ 327 (352)
+.|++ ++.+.-+....|+ +.+.+............. ......+.+.+.++ |+.+.+.. .+.+.+++..
T Consensus 336 ~~L~~l~~~~~~~~~v~r~~g~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~----~~~~~~~l~~ 409 (428)
T PRK12389 336 EGILEAAEKHGITITINRLKGA-LTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ-GINLAPSK----YEAWFLTTAH 409 (428)
T ss_pred HHHHHHHHhCCCCEEEEecCcE-EEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC-CcEeecCC----CCCeeecCCC
Confidence 55543 3222112122343 334432210000000000 00145677887865 99998742 2335666667
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 018665 328 SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~~~ 345 (352)
+++|++++++++++++++
T Consensus 410 t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 410 TEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999999875
No 312
>PRK06917 hypothetical protein; Provisional
Probab=99.83 E-value=1.3e-17 Score=153.98 Aligned_cols=298 Identities=12% Similarity=0.087 Sum_probs=184.9
Q ss_pred CcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChHHHH-HhcCC------------eEEEecccCCCC-
Q 018665 37 DQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYPEMA-RIADA------------TPVILPTRISEN- 94 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~~~~-~~~g~------------~v~~i~~~~~~~- 94 (352)
+.+++++++++|++.+++... ....+|+.....|++....+ ...+. .+..++.+....
T Consensus 92 ~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 171 (447)
T PRK06917 92 NWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRC 171 (447)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccccc
Confidence 579999999999999998752 12367888888888765433 22221 112222221100
Q ss_pred -cc--------cCHHHHHhhcc----CCeeEEEEcCCCC-Cccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 95 -FL--------LDPKVLESKLT----EKSRLLILCSPSN-PTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 95 -~~--------~d~~~l~~~l~----~~~~~i~i~~p~n-ptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
+. -+++.+++.++ +++.+|++..... ..|. ..|.+.+++|.++|+++ |+++|+||++.++...|
T Consensus 172 ~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~-g~llI~DEv~tGfGRtG 250 (447)
T PRK06917 172 PVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY-DILFIADEVMTGLGRTG 250 (447)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc-CCEEEEechhhCcCccc
Confidence 00 12456666664 3577777776554 4454 56788999999999999 99999999999886666
Q ss_pred CCccccccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHhh----hhccccCCChHHHHHHHHHhcccCCC
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
... ........+| +.+++|.+| +|. ++|.+++++++++.+... ....+++.|++..+++.+.++.-.
T Consensus 251 ~~~-a~~~~gv~PD----i~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~-- 322 (447)
T PRK06917 251 AMF-AMEHWGVEPD----IMTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYME-- 322 (447)
T ss_pred chh-hHHhcCCCCC----EEEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHH--
Confidence 421 1111221122 567899998 785 999999999998877532 223467789999999999987521
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 310 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~ 310 (352)
-+++.++.+++-+++.+.|++ .+.+.-+. ..|.++.+++...................+.+.++++ |+.+.
T Consensus 323 ---~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~ 397 (447)
T PRK06917 323 ---KHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVR-GKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKN-GLLLY 397 (447)
T ss_pred ---HCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe-ecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhC-CcEEE
Confidence 112334444444445444443 33222222 3455566665321000000000000245677777765 99997
Q ss_pred cCCCC---CCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 311 PGDAF---GDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 311 ~g~~~---~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++..- ...+.+|++++. +++|+++++++|.++++++..
T Consensus 398 ~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 398 PAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred ecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 74211 124689999884 999999999999999987643
No 313
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.83 E-value=1.1e-17 Score=154.90 Aligned_cols=293 Identities=12% Similarity=0.091 Sum_probs=184.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHH-HHHhcCC------------eEEEecccCCCC-
Q 018665 37 DQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIADA------------TPVILPTRISEN- 94 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~-~~~~~g~------------~v~~i~~~~~~~- 94 (352)
+.++++++|++|++.+++.... ...+|+.....|++... ++...+. .+..+|.+....
T Consensus 130 ~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~ 209 (472)
T PRK08742 130 SKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLA 209 (472)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcccc
Confidence 5899999999999999987521 13578888888877653 2222221 123333321100
Q ss_pred -cc--------cCHHHHHhhcc---CCeeEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 95 -FL--------LDPKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 95 -~~--------~d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
+. .+++.+++.+. +++.++++.. .++..|. ..|++.++++.++|+++ |+++|.||++.+++.+|.
T Consensus 210 ~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~-gillI~DEV~TGfGRtG~ 288 (472)
T PRK08742 210 EPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH-GAFLIADEIATGFGRTGT 288 (472)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCcc
Confidence 00 12566666663 4677777776 3666676 46788999999999999 999999999999877664
Q ss_pred CccccccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHh------hhhccccCCChHHHHHHHHHhcccCC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
.. ...... ...-+.+++|.+| +|. ++|.+++++++.+.+.. .....+++.|++..+++.++++.-..
T Consensus 289 ~~-a~e~~g----v~PDiv~~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~ 362 (472)
T PRK08742 289 LF-ACEQAG----VMPDLLCLSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD 362 (472)
T ss_pred ch-HHHhcC----CCCCEEEEccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH
Confidence 22 112111 1222556789998 784 99999999999887642 12345678899999999999875211
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCC-CCChHHHHHHHHHccCEEeccC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~i~~g 312 (352)
++..++..+ ..+....+.+.+++++.+.-+. ..|.++.+++......+.. +.. ......+.+.++++ |+.+.+.
T Consensus 363 -~~l~~~~~~-~g~~l~~~~~~~~~~~~i~dvR-G~Gl~~giel~~~~~~~~~-~~~~~~~~~~~~~~~~~~-Gll~~~~ 437 (472)
T PRK08742 363 -DDVIARNQP-TAARMTQLAAQIGEHPHVADVR-QAGMVVAFELTRGGNKRTP-FPPAARVGLHAYRAALAR-GVVLRPL 437 (472)
T ss_pred -CCHHHHHHH-HHHHHHHHHHHHhcCCCeeeEe-ccceEEEEEeccCcccccc-CCchhHHHHHHHHHHHHC-CeEEEec
Confidence 122222222 2222223333444454333333 3456666666421110000 000 00124677777765 9998763
Q ss_pred CCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 313 DAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+|+.++. +++|+++++++|+++++++
T Consensus 438 -----g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 438 -----GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred -----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3689999987 9999999999999999764
No 314
>PLN02271 serine hydroxymethyltransferase
Probab=99.83 E-value=1.4e-17 Score=152.18 Aligned_cols=279 Identities=14% Similarity=0.093 Sum_probs=188.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH---------HhcCCeEEEec--ccCCCCcccCHHHHHh-
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---------RIADATPVILP--TRISENFLLDPKVLES- 104 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~---------~~~g~~v~~i~--~~~~~~~~~d~~~l~~- 104 (352)
.+|... |++.|+..++.+++++||+|+..+..|.++.... ...|..+..++ ++. .+..+|.+++++
T Consensus 216 aNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~-~~g~IDyd~lek~ 293 (586)
T PLN02271 216 VNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNP-QTGYIDYDKLEEK 293 (586)
T ss_pred cceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccc-ccCccCHHHHHHH
Confidence 456665 7778899999999999999999888777765432 33465555544 543 345699999998
Q ss_pred hccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccc
Q 018665 105 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 184 (352)
Q Consensus 105 ~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 184 (352)
+...++++|++....+| ..+| ++++.++|+++ |+++++|.+|......+...++... ..+++++|.+|+
T Consensus 294 a~~~rPKLII~g~Sayp--r~~D---~~~i~eIAdev-GA~LmvD~AH~aGLIa~g~~~sP~~-----~aDvvt~TTHKt 362 (586)
T PLN02271 294 ALDFRPKILICGGSSYP--REWD---YARFRQIADKC-GAVLMCDMAHISGLVAAKECVNPFD-----YCDIVTSTTHKS 362 (586)
T ss_pred hhhcCCeEEEECchhcc--CcCC---HHHHHHHHHHc-CCEEEEECcccccccccCcCCCCCc-----CCcEEEeCCccc
Confidence 55679999998777777 6678 88999999999 9999999999854333222211111 244999999999
Q ss_pred cccccceeEEEEcChh--------------------HHHHHHhhhhc-cccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 185 FAMTGWRLGYIAGPKH--------------------FVAACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 185 ~g~~g~~~g~l~~~~~--------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+ .|.|.|.++.+++ +.+++....-+ .-.++.....++.+.++.... ...+.+-.+
T Consensus 363 L--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~--~~efk~Ya~ 438 (586)
T PLN02271 363 L--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVA--TPEYKAYMQ 438 (586)
T ss_pred C--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHh--ChHHHHHHH
Confidence 8 5556688887653 33334332211 112333333555555555311 234467778
Q ss_pred HHHHHHHHHHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-----C
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----D 317 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-----~ 317 (352)
++.++.+.|.+.|.+. |+.++.. .....+++++.... .++... +.++++.||.+.-...++ .
T Consensus 439 QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~g----------~~G~~a-e~~Le~~~I~~Nkn~iP~d~~~~~ 506 (586)
T PLN02271 439 QVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTLG----------LTGKNY-EKVCEMCHITLNKTAIFGDNGTIS 506 (586)
T ss_pred HHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCcccC----------CCHHHH-HHHHHHcCeEeccccCCCCCCCCC
Confidence 8888999999999887 8888743 34556778875431 144444 445556689875544332 2
Q ss_pred CCeEEEEeec------CHHHHHHHHHHHHHHHh
Q 018665 318 DTCIRISYAA------SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 318 ~~~iRi~~~~------~~~~l~~~~~~l~~~~~ 344 (352)
++.+||.... .++|+++..+.|.++++
T Consensus 507 psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 507 PGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 5679998764 66899998888888876
No 315
>PRK07036 hypothetical protein; Provisional
Probab=99.82 E-value=1.6e-17 Score=154.03 Aligned_cols=305 Identities=12% Similarity=0.112 Sum_probs=188.3
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc------C--CCCEEEecCCCCCChHHHHHh-cC----------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC------S--PGDEVIIPAPFWVSYPEMARI-AD---------- 81 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~--~~~~vl~~~~~~~~~~~~~~~-~g---------- 81 (352)
..+|+.+... .+-.-+.+++++|+++|++.+++... . ...+|+.....|++....+.. .+
T Consensus 98 ~~lae~L~~~-~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~ 176 (466)
T PRK07036 98 AELAAKLAEL-APGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDY 176 (466)
T ss_pred HHHHHHHHHh-CCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccC
Confidence 4455555411 11123689999999999999998642 1 135788888888876533221 11
Q ss_pred --CeEEEecccCCC--Cccc--------CHHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCE
Q 018665 82 --ATPVILPTRISE--NFLL--------DPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 82 --~~v~~i~~~~~~--~~~~--------d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~ 144 (352)
..+..++.+... .... ..+.+++.+. +++.+|++...+...|.. +|.+.+++|.++|++| |+
T Consensus 177 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~-g~ 255 (466)
T PRK07036 177 ASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY-DI 255 (466)
T ss_pred CCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc-CC
Confidence 113333332110 0111 1234444442 467788887777777765 5678999999999999 99
Q ss_pred EEEecccccccccCCCCccccc-cCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHh-------hhhccccC
Q 018665 145 LVLSDEIYEHIIYAPATHTSFA-SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSG 215 (352)
Q Consensus 145 ~livD~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~-------~~~~~~~~ 215 (352)
++|+||++.+++..|.. .... .....+ -+.+++|.+| +| +++|.+++++++.+.+.. .....+++
T Consensus 256 llI~DEV~tGfGRtG~~-~~~~~~~gv~P----Divt~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~ 329 (466)
T PRK07036 256 LYISDEVVTGFGRLGHF-FASEAVFGIQP----DIITFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYS 329 (466)
T ss_pred EEEEeechhCCCcCchh-hhhhhhcCCCC----CEEEEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCC
Confidence 99999999988766642 1111 111111 2567799998 78 499999999999887753 12334678
Q ss_pred CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhc---ccCCceecCCCCceEEEeecCCccCCccc-CCCCC
Q 018665 216 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG---ELEGVKMSEPQGAFYLFIDFSTYYGSEAE-GFGKI 291 (352)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~ 291 (352)
.|++..+++.+.++.-.. + ++.++.+++-+++.+.|+ +.+.+.-+. ..|.++.+++......+.. .. ..
T Consensus 330 gnpl~~aaa~a~Le~i~~-~----~l~~~~~~~g~~l~~~L~~l~~~~~v~~vr-G~Gl~~~ve~~~~~~~~~~~~~-~~ 402 (466)
T PRK07036 330 GHPVACAAALKNIEIMER-E----GLCEHVREVGPYFEERLASLRELPLVGDVR-GDHLMACVECVADKGSKALLPE-DI 402 (466)
T ss_pred CCHHHHHHHHHHHHHHHh-C----CHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eeceEEEEEEccCccccCCCCc-hh
Confidence 899999999999875211 2 233344444444444443 333222222 3456666766322110000 00 00
Q ss_pred CChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 292 ENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 292 ~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.....+.+.++++ |+.+.+. .+.+|++++. +++|+++++++|.++++++
T Consensus 403 ~~~~~~~~~~~~~-Gvl~~~~-----~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 403 AIGQRIDRHCQER-GLLVRPL-----EHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred HHHHHHHHHHHHC-CcEEeec-----CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 0134677777765 8998763 2578999877 9999999999999998776
No 316
>PRK07480 putative aminotransferase; Validated
Probab=99.82 E-value=7.6e-18 Score=155.78 Aligned_cols=296 Identities=13% Similarity=0.080 Sum_probs=182.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------C-CCEEEecCCCCCChHH-HHHhcCC------------eEEEecccCCC-
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS-------P-GDEVIIPAPFWVSYPE-MARIADA------------TPVILPTRISE- 93 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~-------~-~~~vl~~~~~~~~~~~-~~~~~g~------------~v~~i~~~~~~- 93 (352)
.+.+++++||++|++.+++.... . ..+|+.....|++... .+...|. .+..++.+...
T Consensus 111 ~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (456)
T PRK07480 111 FNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFG 190 (456)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccc
Confidence 46899999999999999986421 1 3468887777776542 2221111 11122211100
Q ss_pred -CcccC--------HHHHHhhc----cCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 94 -NFLLD--------PKVLESKL----TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 94 -~~~~d--------~~~l~~~l----~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.+..+ ++.+++.+ .+++.+|++...+...|.. .|.+.+++|.++|++| |+++|+||++.+|+.+|
T Consensus 191 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG 269 (456)
T PRK07480 191 EGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY-DILLVADEVICGFGRTG 269 (456)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCc
Confidence 00001 25555444 2467788887777767775 5677899999999999 99999999999887666
Q ss_pred CCccccccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHh----hhhccccCCChHHHHHHHHHhcccCCC
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK----IQSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
.. ......... .-+.+++|.++ +|. ++|.+++++++.+.+.. .....+++.|++..+++.++|+....
T Consensus 270 ~~-~a~~~~gv~----PDiv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~- 342 (456)
T PRK07480 270 EW-FGSQHFGIK----PDLMTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD- 342 (456)
T ss_pred ch-hhhhhcCCC----CCeeeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh-
Confidence 42 122222211 22567899998 774 89999999999887731 23456788999999999999976211
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCC-CCChHHHHHHHHHccCEEeccC
Q 018665 235 GEVVSKM-VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 235 ~~~~~~~-~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~i~~g 312 (352)
++..++. .+.-...++.+.+ +++.+.+.-+. ..|.++.+++-+...... .+.. ......+.+.++++ |+.+.+.
T Consensus 343 ~~l~~~~~~~~g~~l~~~l~~-l~~~~~i~~vr-G~Glm~gie~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-Gll~~~~ 418 (456)
T PRK07480 343 EGIVERVRDDTGPYLQKRLRE-LADHPLVGEVR-GVGLVGAIELVKDKATRE-RFEAGGGVGTICRDHCFAN-GLIMRAV 418 (456)
T ss_pred CCHHHHHHHHHHHHHHHHHHH-hhcCCCeeeEE-eecceEEEEEeccccccc-cCcchhhHHHHHHHHHHHC-CcEEeec
Confidence 2223333 1223333333443 33443222233 335556666632111000 0000 00124566777765 8988652
Q ss_pred CCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 313 DAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+.+|++++. +++|+++++++|.+++.++..
T Consensus 419 -----~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 419 -----GDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred -----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3579999988 999999999999999987643
No 317
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.82 E-value=9.8e-18 Score=154.98 Aligned_cols=290 Identities=12% Similarity=0.117 Sum_probs=178.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHH-hc--CCe------EEEecccCC-----CCcccCH
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMAR-IA--DAT------PVILPTRIS-----ENFLLDP 99 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~-~~--g~~------v~~i~~~~~-----~~~~~d~ 99 (352)
.+.+.+++++++|++.+++... ...++|+....+|+++...+. .. +.. ...++.... -.+ .|+
T Consensus 155 ~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~ 233 (474)
T PLN02482 155 VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDL 233 (474)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CCh
Confidence 4799999999999999998753 234688888888888653221 10 100 000000000 000 267
Q ss_pred HHHHhhcc---CCeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 100 KVLESKLT---EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 100 ~~l~~~l~---~~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
+.+++.+. +++.+|++.......|.+.| ++++++|.++|++| |+++|+||++.++ ..+.. .........
T Consensus 234 ~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~-g~lLI~DEV~tGf-R~g~~-ga~~~~gv~---- 306 (474)
T PLN02482 234 EAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKEN-GALLVFDEVMTGF-RIAYG-GAQEYFGIT---- 306 (474)
T ss_pred HHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCe-ecCcc-hHhHHhCCC----
Confidence 88888774 35677777777777786654 78899999999999 9999999999877 44432 221111111
Q ss_pred EEEeccccccccccceeEEEEcChhHHHHHHhh---hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
.-+.+++|.+| +|+++|.+++++++++.+... ....+++.|++...++.+.|+.-.. . ++.++++++-+++
T Consensus 307 PDi~t~gK~lg-gG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~----~~~~~~~~~g~~l 380 (474)
T PLN02482 307 PDLTTLGKVIG-GGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-P----GTYEYLDKITKKL 380 (474)
T ss_pred CCEEEecchhh-CCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-c----CHHHHHHHHHHHH
Confidence 22567899998 889999999999999887532 2334566899999988888876211 2 3444455555555
Q ss_pred HHHhccc---CCceec-CCCCceEEEeecCCccCCcccCCC-C-CCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEee
Q 018665 253 VKSFGEL---EGVKMS-EPQGAFYLFIDFSTYYGSEAEGFG-K-IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 326 (352)
Q Consensus 253 ~~~l~~~---~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~ 326 (352)
.+.|+++ .+..+. ....++ +.+.+.......+.... . ......+.+.++++ ||.+.+... +.+ -+++.
T Consensus 381 ~~~L~~l~~~~g~~~~~~~v~g~-~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~~~~~~~---~~~-~psl~ 454 (474)
T PLN02482 381 IQGILEAGKKAGHEMCGGYISGM-FGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEE-GVYLAPSQF---EAG-FTSLA 454 (474)
T ss_pred HHHHHHHHHhcCCCEEEcccceE-EEEEEecCCccChhhhccCCHHHHHHHHHHHHHC-CeEEeccCC---CCC-cCCCC
Confidence 5555443 133333 222343 22333211000000000 0 00134677888876 999977432 111 25666
Q ss_pred cCHHHHHHHHHHHHHHHhh
Q 018665 327 ASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 327 ~~~~~l~~~~~~l~~~~~~ 345 (352)
++++||+++++++++++++
T Consensus 455 ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 455 HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 6999999999999999875
No 318
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.82 E-value=5.2e-18 Score=155.53 Aligned_cols=296 Identities=12% Similarity=0.080 Sum_probs=181.2
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHH----HHHhcCCeE----EEec-ccCCCC----cccCHHH
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPE----MARIADATP----VILP-TRISEN----FLLDPKV 101 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~----~~~~~g~~v----~~i~-~~~~~~----~~~d~~~ 101 (352)
+.++++++|++|++.+++... ....+|+....+|+++.. .....+... .... ...... .-.|++.
T Consensus 111 ~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (433)
T PRK00615 111 HKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQI 190 (433)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHH
Confidence 689999999999999998753 233578888888887541 111111100 0000 000000 0026788
Q ss_pred HHhhcc---CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEE
Q 018665 102 LESKLT---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 177 (352)
Q Consensus 102 l~~~l~---~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 177 (352)
+++.+. +++.+|++.......|... +++.+++|.++|++| |+++|+||++.++ ..|. ..........+|
T Consensus 191 l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~-R~G~-~ga~~~~gv~PD---- 263 (433)
T PRK00615 191 FQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT-GSLSIMDEVVTGF-RVAQ-GGAAAIYHVKPD---- 263 (433)
T ss_pred HHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEcccccc-cccH-hHHHHhcCCCCC----
Confidence 888774 3566777777677777655 577899999999999 9999999999877 4443 122121111112
Q ss_pred EeccccccccccceeEEEEcChhHHHHHHhh---hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 178 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 178 ~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
+.+++|.+| +|.++|++++++++++.+... ....+++.++...+++.+.++.-.. .+..+++.+......+.+.+
T Consensus 264 i~~~gK~lg-gG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~-~~~~~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 264 ITVYGKILG-GGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE-QGFYTQLSTLEQNFLSPIEE 341 (433)
T ss_pred eEEEccccc-CCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHH
Confidence 345899998 788999999999999887532 1334566799999999999876221 22233333333333344444
Q ss_pred HhcccCCceecCCCCceEEEeecCCccCCcccCC--CCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeecCHHHH
Q 018665 255 SFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGF--GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTL 332 (352)
Q Consensus 255 ~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~~~~~l 332 (352)
.+.+. ++.+.....|.++.+.+.+......... ........+.+.|.++ ||.+.+... +..-++..++++||
T Consensus 342 ~~~~~-g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~----~~~~ls~~ht~~di 415 (433)
T PRK00615 342 MIRSQ-GFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPF----EASFLSSAHSMENL 415 (433)
T ss_pred HHHHc-CCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCccc----cccceecCCCHHHH
Confidence 44443 3332222256666677643211000000 0000134688888876 999887531 11246777799999
Q ss_pred HHHHHHHHHHHhhhC
Q 018665 333 QAAVERIKKGLLTLR 347 (352)
Q Consensus 333 ~~~~~~l~~~~~~~~ 347 (352)
+++++.+.++++++-
T Consensus 416 d~~~~a~~~~~~~~~ 430 (433)
T PRK00615 416 DYAQNVLIDSLEKVF 430 (433)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998753
No 319
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.82 E-value=1.9e-18 Score=155.77 Aligned_cols=281 Identities=11% Similarity=0.051 Sum_probs=186.4
Q ss_pred HHHHHHHHhcCCCCC-CCcEEEe-CChHHHHHHHHHHhcCCCCEEEecCCCCCC-hHHHHHh--cCCeEEEecccCCCCc
Q 018665 21 QQFVINLKENGLSYT-PDQILVS-NGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMARI--ADATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~~~i~~~-~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~-~~~~~~~--~g~~v~~i~~~~~~~~ 95 (352)
+.++++++ +. ..+|+++ +|+|.+++.++.++..+ +.+++....|.. +...+.. ++.++..++.+. +.
T Consensus 48 ~~l~~l~~-----~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~ 119 (361)
T TIGR01366 48 EGLAELFS-----LPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GS 119 (361)
T ss_pred HHHHHHhC-----CCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CC
Confidence 78888876 43 3478875 66999999999998743 333343444432 2233333 223667776643 21
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
.++ ..+.+++++|++++..|.||...| +++| ++++ |+++|+|.+++. +..+..+.. .+
T Consensus 120 ~~~-----~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~~~~-g~~~iVDavqs~----g~~~idv~~------~D 177 (361)
T TIGR01366 120 APE-----PQADPGVDVIAWAHNETSTGVAVP---VRRP---EGSD-DALVVIDATSGA----GGLPVDIAE------TD 177 (361)
T ss_pred CCC-----CccCCCCCEEEEcccCCccceecc---cccc---cccC-CCeEEEEcCccc----cCCCCCHHH------CC
Confidence 222 234568999999999999999999 6665 4788 999999999986 333333332 24
Q ss_pred EEEeccccccccccceeEEEEcChhHHHHHHhhh---------------------hccccCCChHHHHHHHHHhcccCCC
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
++++|.+|.+|.+| ++++++.++++++++.... ..+..+++.....++.++++.-.
T Consensus 178 ~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~-- 254 (361)
T TIGR01366 178 VYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMN-- 254 (361)
T ss_pred EEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHH--
Confidence 88999999998554 4777778888877665211 01123344444446666665411
Q ss_pred hH-HHHHHHHHHHHHHHHHHHHhcccCCceecCC-C---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 235 GE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEP-Q---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
.. .++.+.++.+++.+++.+.++++++++.+.. . ......+.+++.. +..++.+.|.++ ||.+
T Consensus 255 ~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~-----------~~~~v~~~L~~~-gI~i 322 (361)
T TIGR01366 255 GNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDI-----------DAATVAKILRAN-GIVD 322 (361)
T ss_pred HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCcc-----------CHHHHHHHHHHC-CCee
Confidence 22 3677778889999999999998855555421 1 1111223334332 788899998765 9998
Q ss_pred ccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 310 VPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 310 ~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.++......+.+|+|+.. +.+|++++++.|+++++++
T Consensus 323 ~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 323 TEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred ccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 776433235789999988 9999999999999988753
No 320
>PRK07046 aminotransferase; Validated
Probab=99.82 E-value=1.6e-17 Score=153.32 Aligned_cols=287 Identities=13% Similarity=0.046 Sum_probs=179.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHH-h--cC----------C------eEEEecccCCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMAR-I--AD----------A------TPVILPTRISEN 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~-~--~g----------~------~v~~i~~~~~~~ 94 (352)
.+.+.+++++++|...+++... ...++|+....+|+++..... . .+ . .+..++
T Consensus 130 ~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------ 203 (453)
T PRK07046 130 LPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------ 203 (453)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------
Confidence 5789999999999999998753 234688888888888743221 1 11 0 011111
Q ss_pred cccCHHHHHhhcc-CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCC
Q 018665 95 FLLDPKVLESKLT-EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 172 (352)
Q Consensus 95 ~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
+ .|++.+++.+. ++..+|++...+...|.. .+.++++++.++|+++ |+++|.||++. +.. +... .....
T Consensus 204 ~-nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~-g~llI~DEV~t-fr~-g~Gg-~~~~~---- 274 (453)
T PRK07046 204 F-NDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRY-GTLLVIDETHT-ISS-GPGG-YTRAH---- 274 (453)
T ss_pred C-CCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEcccc-Ccc-CCcc-hhHHh----
Confidence 1 27899998885 467777777666555655 4567999999999999 99999999987 321 1111 11111
Q ss_pred CceEEEeccccccccccceeEEEEcChhHHHHHHhh---------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 173 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI---------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 173 ~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+...-+.+++|.+| +|+++|.+++++++++.+... ....+++.|++..+++.+.++.-.. .+..+++.+
T Consensus 275 gv~PDi~t~gK~lg-gG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~-~~~~~~~~~ 352 (453)
T PRK07046 275 GLEPDFLVVGKPIA-GGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT-EAAYAHMLA 352 (453)
T ss_pred CCCccceeehhhhc-CCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc-ccHHHHHHH
Confidence 11122556899998 889999999999999887531 1234677899999999999875221 233444444
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCC---CChHHHHHHHHHccCEEeccCCCCCCCCe
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI---ENSESLCRYLLDKAQVALVPGDAFGDDTC 320 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~i~~g~~~~~~~~ 320 (352)
.-.+.++.+.+.+.+. ++.......|.++.+.+.............. .....+...++++ ||.+.|. .+.
T Consensus 353 ~g~~l~~~L~~l~~~~-~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~-----~~~ 425 (453)
T PRK07046 353 LAARLAAGLRAVIARH-GLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNR-GVLITPF-----HNM 425 (453)
T ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHC-CCEEecc-----cCc
Confidence 4444444444444444 3322211223333444321100000000000 0123566677765 9998763 246
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 321 IRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
++++++.+++||+++++++.++++++
T Consensus 426 ~~~~p~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 426 MLVCPATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 78888889999999999999999865
No 321
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.82 E-value=3.1e-17 Score=152.02 Aligned_cols=291 Identities=11% Similarity=0.068 Sum_probs=185.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhc------C--CCCEEEecCCCCCChHHH-HHhcCC------------eEEEecccCCCC
Q 018665 36 PDQILVSNGAKQSILQAVLAVC------S--PGDEVIIPAPFWVSYPEM-ARIADA------------TPVILPTRISEN 94 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~------~--~~~~vl~~~~~~~~~~~~-~~~~g~------------~v~~i~~~~~~~ 94 (352)
.+.+++++++++|++.+++... . ...+|+.....|++.... +...+. .+..+|.+....
T Consensus 107 ~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 186 (466)
T PRK07030 107 LSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYL 186 (466)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccc
Confidence 3689999999999999998752 1 235788888888776533 322221 122233221100
Q ss_pred --cc--------cCHHHHHhhcc---CCeeEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 95 --FL--------LDPKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 95 --~~--------~d~~~l~~~l~---~~~~~i~i~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.. -+++.+++.+. +++.++++.. .+...|. ..|++.+++|.++|+++ |+++|.||++.++..+|
T Consensus 187 ~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~-g~llI~DEV~TGfGRtG 265 (466)
T PRK07030 187 RPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY-GVHLIHDEIAVGFGRTG 265 (466)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCcCccc
Confidence 00 12455666664 4677777776 4666676 45678999999999999 99999999999987766
Q ss_pred CCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHh-------hhhccccCCChHHHHHHHHHhccc
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~ 231 (352)
... ....... ..-+.+++|.+| +| +++|.+++++++.+.+.. .....+++.|++..+++.+.++.-
T Consensus 266 ~~~-a~~~~gv----~PDiv~~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i 339 (466)
T PRK07030 266 TMF-ACEQAGI----RPDFLCLSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIF 339 (466)
T ss_pred cch-HHHhcCC----CCCEEeeehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 421 1111111 122556789998 88 499999999999887742 234566788999999999998762
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcc---cCCceecCCCCceEEEeecCCccCCcccCCC-CCCChHHHHHHHHHccCE
Q 018665 232 YAGGEVVSKMVKAFRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKAQV 307 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi 307 (352)
.. + ++.++.++.-+++.+.|++ .+.+.-+. ..|.++.+++......+ ..+. .......+.+.++++ |+
T Consensus 340 ~~-~----~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~-~~~~~~~~~~~~i~~~~~~~-Gv 411 (466)
T PRK07030 340 EQ-D----NVIENNRALARRMAEATAHLADHPHVAEVR-QTGMILAIEMVQDKASK-TPYPWQERRGLKVYQHALER-GA 411 (466)
T ss_pred Hh-c----CHHHHHHHHHHHHHHHHHHHhcCCCEEEeE-eceeEEEEEeccCcccc-ccCcchhHHHHHHHHHHHHC-Ce
Confidence 11 2 2333444444444444433 34333333 34566666664311100 0000 000124677787865 99
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+. .+.+|+.++. +++|+++++++|.++++++
T Consensus 412 l~~~~-----g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 412 LLRPL-----GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred EEEec-----CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 98763 2578998776 9999999999999999887
No 322
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.82 E-value=8.8e-18 Score=149.89 Aligned_cols=292 Identities=13% Similarity=0.108 Sum_probs=188.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CC-CCEEEecCCCCCChH-HHHHhcC-------------CeEEEecccCC-
Q 018665 36 PDQILVSNGAKQSILQAVLAVC-------SP-GDEVIIPAPFWVSYP-EMARIAD-------------ATPVILPTRIS- 92 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~-------~~-~~~vl~~~~~~~~~~-~~~~~~g-------------~~v~~i~~~~~- 92 (352)
-++|++++|||+|++.+++... ++ ..+++.-...|++-. .++...| ..+..++.+..
T Consensus 105 l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y 184 (449)
T COG0161 105 LDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAY 184 (449)
T ss_pred ccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCccc
Confidence 4789999999999999998742 12 234777677666432 2222211 22333333321
Q ss_pred -----CCcc----cCHHHHHhhcc----CCeeEEEEcCCCCC-cccCC-CHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 93 -----ENFL----LDPKVLESKLT----EKSRLLILCSPSNP-TGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 93 -----~~~~----~d~~~l~~~l~----~~~~~i~i~~p~np-tG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
+.+. -..++|++.+. +++.++|+...... +|..+ |+..++++.++|++| |+++|.||+..+|+.
T Consensus 185 ~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky-~ILlI~DEV~tGFGR 263 (449)
T COG0161 185 RRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY-GILLIADEVATGFGR 263 (449)
T ss_pred ccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc-CcEEEeecceeCCCc
Confidence 1111 23566777664 34556666555544 77665 566899999999999 999999999999988
Q ss_pred CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh-----hhccccCCChHHHHHHHHHhcccC
Q 018665 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
+|+- +..- ..+...-+-+++|.++.+=+++|.+++++++.+.+... .+.++++.|+++.+++.+.|+.-.
T Consensus 264 TG~~---FA~e--~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e 338 (449)
T COG0161 264 TGKM---FACE--HAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILE 338 (449)
T ss_pred Cchh---hhhh--hcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHH
Confidence 7752 2211 11223336778899973447999999999999888654 345678899999999999887522
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
. +.++ ++.++.-.++.+.|++ .|.+.-+ ...|++..+++......+. -+ .......+.+.+.++ |+.
T Consensus 339 ~-e~l~----~~~~~~~~~l~~~L~~~l~~~p~VgdV-R~~Gli~~iElv~d~~t~~-~f-~~~~~~~~~~~~~e~-Gl~ 409 (449)
T COG0161 339 E-EDLL----ERVAEIGAYLQAGLQAALADHPLVGDV-RGLGLIGAIELVADKATKT-PF-EARVGARVRAAALER-GLL 409 (449)
T ss_pred h-cCHH----HHHHHHHHHHHHHHHHhcccCCcEEEe-eccceEEEEEEeccccccc-ch-hhhHHHHHHHHHHHC-CeE
Confidence 1 3333 4444455555555554 2233333 3456767777644321110 00 001256777777766 999
Q ss_pred eccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 309 LVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 309 i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
++|. .+.+-++++. ++++++++++++++++++..
T Consensus 410 iRp~-----g~~i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 410 IRPL-----GDVIYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred Eeec-----CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 9995 4477777776 99999999999999998754
No 323
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=3.4e-17 Score=151.64 Aligned_cols=292 Identities=15% Similarity=0.098 Sum_probs=183.2
Q ss_pred cEEEe-CChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-cC------------CeEEEecccCCCC--c----
Q 018665 38 QILVS-NGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD------------ATPVILPTRISEN--F---- 95 (352)
Q Consensus 38 ~i~~~-~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~g------------~~v~~i~~~~~~~--~---- 95 (352)
.+++. ++|++|++.+++... ....+|+.....|++....... .+ ..+..++.+.... +
T Consensus 128 ~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 207 (464)
T PRK06938 128 KIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGG 207 (464)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCch
Confidence 56554 799999999998753 2346788888778776533222 11 1233444432110 0
Q ss_pred ----ccCHHHHHhhccC------CeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 96 ----LLDPKVLESKLTE------KSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 96 ----~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
..+++.+++.+.+ ++.++++...+...|.. +|.+.++++.++|+++ |+++|.||++.+++.+|.. ..
T Consensus 208 ~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~-giLlI~DEV~tGfGRtG~~-~a 285 (464)
T PRK06938 208 EAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA-GIPLIVDEIQSGFGRTGKM-FA 285 (464)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcHH-HH
Confidence 0135677777752 46777777667666765 5688999999999999 9999999999998776642 11
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
.....- ..-+.+++|.+| +|+++|.+++++++ +.+.......+++.|++..+++.+.++.-. + +++.++
T Consensus 286 ~e~~gv----~PDiv~~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~--~---~~l~~~ 354 (464)
T PRK06938 286 FEHAGI----IPDVVVLSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK--E---HRLAEH 354 (464)
T ss_pred HHhcCC----CCCEEEeecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH--H---hHHHHH
Confidence 111211 122566789998 88999999998774 544333455678899999999999987521 1 123334
Q ss_pred HHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCc-ccCCCC--CCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 245 FRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGK--IENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 245 ~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
.+++-+++.+.|++ .|.+.-+ ...|.++.+++....... ..+... ......+.+.+.++ |+.+.+++. .
T Consensus 355 ~~~~G~~l~~~L~~l~~~~~~i~~V-rG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~g~--~ 430 (464)
T PRK06938 355 AAAMGERLREHLRQLQRDYPQLGDV-RGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRR-GLILELGGR--H 430 (464)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeee-eccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHC-CeEEeecCC--C
Confidence 44444444444443 3322222 344666667663211100 000000 00134677777765 999876432 2
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+|+.++. +++|++++++++.+++.++
T Consensus 431 ~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 431 GSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 4789998776 9999999999999999764
No 324
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.81 E-value=4.5e-17 Score=132.78 Aligned_cols=299 Identities=16% Similarity=0.198 Sum_probs=210.0
Q ss_pred hhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCccc
Q 018665 18 SFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 18 ~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
.|.+.+++|++ -+.+-+|+|+.++=..++.+++++||-|++...+|....-++++.|.++..+|-.....+.+
T Consensus 65 ~F~~dlaeFlg-------~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i 137 (382)
T COG1103 65 DFLEDLAEFLG-------MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKI 137 (382)
T ss_pred HHHHHHHHHhC-------CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEe
Confidence 46699999984 78899999999999999999999999999999999888889999999999999655556788
Q ss_pred CHHHHHhhcc-------CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCC
Q 018665 98 DPKVLESKLT-------EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 170 (352)
Q Consensus 98 d~~~l~~~l~-------~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~ 170 (352)
+++...+.+. +.+.+.+++++...-|.+.+ .++++++|+++ +++++...+|.- |.-+.+......
T Consensus 138 ~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~-gvPlllN~AYt~----Grmpvs~ke~g~ 209 (382)
T COG1103 138 TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREY-GVPLLLNCAYTV----GRMPVSGKEIGA 209 (382)
T ss_pred cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHc-CCceEeecceee----ccccccccccCC
Confidence 9888777773 24678888999888899988 99999999999 999999999875 444455555544
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh-hccc------cCCChHHHH--HHHHHhcccCCChHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQFT------SGASSISQK--AGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-~~~~------~~~~~~~~~--~~~~~l~~~~~~~~~~~~~ 241 (352)
+++++|-+|++. +.-++|.+..+.++.+..-+.. ..+. .+....+.- .+++.+-. -.+...+.
T Consensus 210 ----DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~---V~eRVkrW 281 (382)
T COG1103 210 ----DFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPH---VVERVKRW 281 (382)
T ss_pred ----CEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHH---HHHHHHHH
Confidence 499999999997 5558999999999888765443 2121 222222222 22222211 01112222
Q ss_pred HHHHHHHHHHHHHHhcccCCceec--CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
-..+ +..+.+.+.|+++.|+..+ .|..-..+.++.|.......+.. ...-=+.++|.++.-+-|.|| ...
T Consensus 282 deEv-~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~---r~gyFlY~ELK~RgI~GI~~G----~Tk 353 (382)
T COG1103 282 DEEV-EKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHK---RKGYFLYEELKKRGIHGIQPG----QTK 353 (382)
T ss_pred HHHH-HHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCc---CCceeeHHHHHhcCccccccC----cee
Confidence 2222 2455788888888666665 33333444555553211000000 012236677777744456665 467
Q ss_pred eEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 320 CIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 320 ~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
++.+|+-. ++|+++..++.+++++++++
T Consensus 354 ~~K~svyGl~~Eqve~V~~afkeI~eky~ 382 (382)
T COG1103 354 YFKLSVYGLSWEQVEYVVDAFKEIAEKYG 382 (382)
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHHHhcC
Confidence 89999877 99999999999999998753
No 325
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=4e-17 Score=151.29 Aligned_cols=291 Identities=12% Similarity=0.149 Sum_probs=185.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcC-------C-CCEEEecCCCCCChHHH-HHhcC------------CeEEEecccCCCC-
Q 018665 37 DQILVSNGAKQSILQAVLAVCS-------P-GDEVIIPAPFWVSYPEM-ARIAD------------ATPVILPTRISEN- 94 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~-------~-~~~vl~~~~~~~~~~~~-~~~~g------------~~v~~i~~~~~~~- 94 (352)
+.+++++|+++|++.+++.... + ..+|+.....|++.... +...+ ..+..+|.+....
T Consensus 117 ~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~ 196 (460)
T PRK06916 117 KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRS 196 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccccc
Confidence 6899999999999999986431 2 36788888888875533 22211 1123333221000
Q ss_pred -c--------ccCHHHHHhhcc---CCeeEEEEcC-CCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 95 -F--------LLDPKVLESKLT---EKSRLLILCS-PSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 95 -~--------~~d~~~l~~~l~---~~~~~i~i~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
+ ..+++.+++.++ +++.++++.. ++...|.. +|.+.++++.++|+++ |+++|.||++.+++..|.
T Consensus 197 ~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~TG~GRtG~ 275 (460)
T PRK06916 197 PYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY-NVLFITDEVATGFGRTGK 275 (460)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEeechhhCCCcCch
Confidence 0 013566667664 5778888877 46666765 5888999999999999 999999999998866664
Q ss_pred CccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHh-------hhhccccCCChHHHHHHHHHhcccC
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
. .........+| +.+++|.++ +| +++|.+++++++.+.+.. .....+++.|++..+++.+.++.-.
T Consensus 276 ~-~a~~~~gv~PD----iv~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~ 349 (460)
T PRK06916 276 M-FACEHENVTPD----IMTAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYE 349 (460)
T ss_pred h-hHHHhcCCCCC----eeeeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 2 11111221112 456799998 78 599999999999887642 1234567789999999999887521
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCC-ChHHHHHHHHHccCEE
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE-NSESLCRYLLDKAQVA 308 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~ 308 (352)
+ +.+.++++++-+++.+.|+++ +.+.-+. ..|.++-+++.+....+ +.+.... ....+.+.++++ |+.
T Consensus 350 --~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vr-G~Glm~giel~~~~~~~-~~~~~~~~~~~~i~~~~~~~-Gvl 421 (460)
T PRK06916 350 --K---TNLIEQVARKTEYVATQLEDLFALKHVGDIR-QLGLMVGIELVKNKETK-EPFEWTERVGVQVCKRSREL-GML 421 (460)
T ss_pred --h---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEee-cCCceeeEEeecccccc-cCCCchhhHHHHHHHHHHHC-CeE
Confidence 1 223444555555555555543 3332223 33555556553211100 0000000 134677887865 999
Q ss_pred eccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 309 LVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 309 i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.+. .+.+|+.++. +++|+++++++|.++++++-
T Consensus 422 ~~~~-----g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 422 TRPL-----GNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred EEec-----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 9773 2578888766 99999999999999998754
No 326
>PRK06148 hypothetical protein; Provisional
Probab=99.81 E-value=1.9e-17 Score=166.24 Aligned_cols=292 Identities=12% Similarity=0.112 Sum_probs=185.4
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHH-HHhcC------------CeEEEecccC--CCCcc-cC
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEM-ARIAD------------ATPVILPTRI--SENFL-LD 98 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~-~~~~g------------~~v~~i~~~~--~~~~~-~d 98 (352)
+.+++++||++|++.+++... ....+|+.....|++.... +...+ ..+..++.+. ...+. .+
T Consensus 681 ~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 760 (1013)
T PRK06148 681 TVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPD 760 (1013)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCCh
Confidence 689999999999999998753 2345788888877776532 21111 1121222110 00111 01
Q ss_pred -------HHHHHhhcc------CCeeEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 99 -------PKVLESKLT------EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 99 -------~~~l~~~l~------~~~~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
.+.+++.++ +++.++++.......|. ..|.+.++++.++|+++ |+++|.||++.+++..|.....
T Consensus 761 ~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~-g~llI~DEVqtGfGRtG~~~~a 839 (1013)
T PRK06148 761 AEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA-GGVCIADEVQVGFGRVGSHWWA 839 (1013)
T ss_pred hhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEecccCCCCCCCcchh
Confidence 123444332 35777777776665665 45788999999999999 9999999999998776642222
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh-hhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+.... ...-+.+++|.+| +|.++|.+++++++++.+... ....+++.|+++.+++.+.++.-.. + ++.+
T Consensus 840 ~e~~g----v~PDivt~gK~lg-gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~-e----~l~~ 909 (1013)
T PRK06148 840 FETQG----VVPDIVTMGKPIG-NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED-E----DLQR 909 (1013)
T ss_pred hhhcC----CCcceeeeccccc-CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhh-c----cHHH
Confidence 22222 2233677899998 899999999999998877542 2346788999999999999885211 2 2333
Q ss_pred HHHHHHHHHHHHhc----ccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 244 AFRERRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 244 ~~~~~~~~l~~~l~----~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+.+++-+++.+.|+ +.+.+.-+. ..|.++-+++.......... ......+.+.++++ ||.+.+.+. ..+
T Consensus 910 ~~~~~G~~l~~~L~~l~~~~~~i~~Vr-G~Gl~~gvel~~~~~~~~~~---~~~~~~i~~~~~~~-Gvl~~~~g~--~~~ 982 (1013)
T PRK06148 910 NALEIGNYLLAGLRELQDRFDIIGDVR-GMGLFLGIELVTDRKTKAPA---TAIARYVKNGARER-GILIGTEGP--HDN 982 (1013)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEe-eeceEEEEEecCCccccCcc---HHHHHHHHHHHHhC-CeEEeccCC--CCC
Confidence 34444444444443 343232233 34566666664211100000 00245677888865 999976422 257
Q ss_pred eEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 320 CIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 320 ~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+|+.++. +++++++++++|.+++.++
T Consensus 983 vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 983 VLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 88998876 9999999999999999865
No 327
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.81 E-value=8.8e-18 Score=138.38 Aligned_cols=284 Identities=15% Similarity=0.130 Sum_probs=192.2
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 100 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~ 100 (352)
.+||++++ .++.++.+++-.|+..++.++..+.|.|+...-+|-+.++..+.+.. + . .+|+-
T Consensus 119 ~kiAqfh~-------rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLckr---y------~--h~dv~ 180 (417)
T KOG1359|consen 119 SKIAQFHG-------REDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKR---Y------R--HVDVF 180 (417)
T ss_pred HHHHHHhC-------CCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHhh---h------c--cchhH
Confidence 77777763 55566666677777777777777777777777777777765554430 0 1 13444
Q ss_pred HHHhh----ccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 101 VLESK----LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 101 ~l~~~----l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.++.. .+.+-++|+-....+..|.+.| +++|.+++++| |.++++||+|..+.+..........+....+.++
T Consensus 181 ~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP---l~ei~~La~kY-gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdi 256 (417)
T KOG1359|consen 181 DLEHCLISACKMRLKLVVTDGVFSMDGDIAP---LEEISQLAKKY-GALLFIDECHATGFFGETGRGTAEEFGVMGDVDI 256 (417)
T ss_pred HHHHHHHHhhhheEEEEEecceeccCCCccc---HHHHHHHHHhc-CcEEEEeecccceeecCCCCChHHHhCCCCccee
Confidence 44443 3456677777778899999999 99999999999 9999999999976554443333333333345668
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHhhhhccccC--CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG--ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
+.++++|++| |...||..++.+++..+++..+++-++ .++.....+.++++. --.-.......+.+++++++
T Consensus 257 insTLgKAlG--ga~GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dl----lm~s~~~i~~~~a~~qrfr~ 330 (417)
T KOG1359|consen 257 INSTLGKALG--GASGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDL----LMVSSKEIQSRQANTQRFRE 330 (417)
T ss_pred hhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHH----HHhhHHHHHHHHHHHHHHHH
Confidence 9999999985 445699999999999998776655443 333334444444442 11223445566778888888
Q ss_pred HhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC---CCeEEEEeec--CH
Q 018665 255 SFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SL 329 (352)
Q Consensus 255 ~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~---~~~iRi~~~~--~~ 329 (352)
.++.. |+++.... ..++-+.+.+. +.+.+.+++|+++ ||++..-+..-- ...+|+.++. ++
T Consensus 331 ~me~a-GftIsg~~-hPI~pv~lGda-----------~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~ 396 (417)
T KOG1359|consen 331 FMEAA-GFTISGAS-HPICPVMLGDA-----------RLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTE 396 (417)
T ss_pred HHHhc-CceecCCC-CCccceecccH-----------HHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCH
Confidence 88876 88886533 22233333322 1567889999988 898864332221 2357776665 99
Q ss_pred HHHHHHHHHHHHHHhhh
Q 018665 330 TTLQAAVERIKKGLLTL 346 (352)
Q Consensus 330 ~~l~~~~~~l~~~~~~~ 346 (352)
||++++++++.++.+.+
T Consensus 397 edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 397 EDIDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988654
No 328
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.81 E-value=2.7e-17 Score=151.20 Aligned_cols=279 Identities=13% Similarity=0.110 Sum_probs=181.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHHHHH-hcCC-------------eEEEecccCC-C
Q 018665 37 DQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRIS-E 93 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~~~~-~~g~-------------~v~~i~~~~~-~ 93 (352)
+.++++++|++|++.+++.... ...+|+....+|++....+. ..+. .+..++.+.. .
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 185 (427)
T TIGR00508 106 DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRF 185 (427)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccc
Confidence 6899999999999999886431 13578888888887643222 2121 1112222110 0
Q ss_pred --Cc-ccCHHHHHhhcc---CCeeEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 94 --NF-LLDPKVLESKLT---EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 94 --~~-~~d~~~l~~~l~---~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.+ .-|++++++.+. ++.++|++... +...|. .+|.+++++|.++|+++ |+++|+||++.+++..|.....
T Consensus 186 ~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~-~~llI~DEv~tG~Gr~G~~~~~- 263 (427)
T TIGR00508 186 DEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY-DILLIADEIATGFGRTGKLFAC- 263 (427)
T ss_pred cchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCccchh-
Confidence 00 124667777664 35667777664 555565 45788999999999999 9999999999887666542111
Q ss_pred ccCCCCCCceEEEeccccccccccc-eeEEEEcChhHHHHHHhhh-----hccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~-~~g~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....-.++ ++ +++|.++ +|+ +++.++.++++.+.+.... ...+++.|++..+++.++++.-.. .
T Consensus 264 ~~~~v~pD--i~--~~gK~l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~-~---- 333 (427)
T TIGR00508 264 EHAGVVPD--IL--CVGKALT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE-G---- 333 (427)
T ss_pred hhcCCCCC--EE--Eechhhh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-C----
Confidence 11111112 33 4799997 784 8999999999988886421 234556789999999998874111 1
Q ss_pred HHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
+..++.+++.+++.+.|+++ +.+.-+. ..|.++.+.+.+. .....+.+.|+++ ||.+.+.
T Consensus 334 ~~~~~~~~~~~~l~~~L~~l~~~~~i~~vr-g~G~~~~i~~~~~-----------~~~~~~~~~l~~~-Gv~~~~~---- 396 (427)
T TIGR00508 334 EWQKQVSAIENQLKRELSPLRKNPVVKDVR-VLGAIGVVEMYKP-----------VNVEELQKKFVEQ-GVWIRPF---- 396 (427)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCEEeEe-ccccEEEEEECCc-----------cCHHHHHHHHHHC-CeEEEec----
Confidence 33455666666666666654 2222111 2255566666432 1567888888876 9998663
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
...+|++++. +++||+++++++++++++
T Consensus 397 -~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 397 -GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 2479998885 999999999999999864
No 329
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.80 E-value=2.6e-18 Score=138.62 Aligned_cols=165 Identities=22% Similarity=0.215 Sum_probs=130.9
Q ss_pred hhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH-HHHHhcCCeEEEecccCCCCcc
Q 018665 18 SFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTRISENFL 96 (352)
Q Consensus 18 ~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~-~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
++.+.++++++ .+.+++.+++|+++++..++.++.+++++|+++.++|++.. ..++..|.+++.++.+......
T Consensus 4 ~~~~~l~~~~~-----~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 4 ELEEKLARLLQ-----PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHcC-----CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccc
Confidence 34499999985 46789999999999999999999888899999999999999 8899999999999987544333
Q ss_pred cCHHHHHhhc-cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
.+.+.+++.. .++++++++++++|++|...| +++|.++|+++ |+++|+|++++.+...... .... ..+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~-~~~li~D~a~~~~~~~~~~----~~~~-~~~~d 149 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEY-GILLLVDAASAGGASPAPG----VLIP-EGGAD 149 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHc-CCEEEEecccccccccccc----cccc-cccCC
Confidence 3333554443 468899999999999999999 68999999999 9999999999976543211 1111 13456
Q ss_pred EEEeccccccccccceeEEEEcC
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGP 198 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~ 198 (352)
+++.|++|.+| + .+.|+++.+
T Consensus 150 ~~~~s~~K~~~-~-~~~G~l~~~ 170 (170)
T cd01494 150 VVTFSLHKNLG-G-EGGGVVIVK 170 (170)
T ss_pred EEEEEcccccC-C-CceEEEEeC
Confidence 88999999997 3 689998753
No 330
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.80 E-value=3.3e-17 Score=140.27 Aligned_cols=296 Identities=15% Similarity=0.140 Sum_probs=190.2
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChH-HHHHhcCCeEEEecccCC-----
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADATPVILPTRIS----- 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~-~~~~~~g~~v~~i~~~~~----- 92 (352)
+.++..+- -+-.-++++||+++|++.+++... ...-.|+....+|++.. ..+-..+......+++..
T Consensus 99 e~L~s~~P-----~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~ 173 (442)
T KOG1404|consen 99 EALVSKLP-----GDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVH 173 (442)
T ss_pred HHHHHhCC-----CCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCccc
Confidence 55555541 233569999999999999887742 22335666666666544 333333332222221110
Q ss_pred ---------CCcccC-----H----HHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEec
Q 018665 93 ---------ENFLLD-----P----KVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 93 ---------~~~~~d-----~----~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD 149 (352)
+-|+-+ - +++++.+. +.+.+.+....+...|.+ +|...+++..++|+++ |.++|.|
T Consensus 174 ~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~-Ggl~IaD 252 (442)
T KOG1404|consen 174 HTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR-GGLFIAD 252 (442)
T ss_pred ccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc-CCEEEeh
Confidence 111111 2 33333331 244556666667777866 6777999999999999 9999999
Q ss_pred ccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh-hccccCCChHHHHHHHHHh
Q 018665 150 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQFTSGASSISQKAGVAAL 228 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 228 (352)
|++++|+.+| ....+.. ++.+.-+-+++|.+| +|+++|.++..+++.+-+.+.. .+++++.+++..++..+.+
T Consensus 253 EVqtGfGRtG-~~wgfe~----h~v~PDIvTmAKgiG-nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL 326 (442)
T KOG1404|consen 253 EVQTGFGRTG-HMWGFES----HGVVPDIVTMAKGIG-NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVL 326 (442)
T ss_pred hhhhcccccc-ccccccc----cCCCccHHHHHhhcc-CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHH
Confidence 9999998887 3344443 355566899999999 8999999999999999888765 7888999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHhccc-CCceec--CCCCceEEEeecCCccCC-cccCCCCCCChHHHHHHHHHc
Q 018665 229 GLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-EGVKMS--EPQGAFYLFIDFSTYYGS-EAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~~~~--~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 304 (352)
+.. .-+++.++....-.+|.+.|.++ ++..++ ....|.++-+++-+...+ ...-+ .....+.+.+.+.
T Consensus 327 ~Vi-----kee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~---~~~~~i~~~cke~ 398 (442)
T KOG1404|consen 327 KVI-----KEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPAT---AEGAVIGEQCKEL 398 (442)
T ss_pred HHH-----HHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcch---HHHHHHHHHHHHh
Confidence 862 22334444555556666666554 122222 123455565655332110 00000 0345677777754
Q ss_pred cCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHH
Q 018665 305 AQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERI 339 (352)
Q Consensus 305 ~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l 339 (352)
|+.+.-|+.++. .+||+++. |.||++.+++..
T Consensus 399 -Gvlvg~g~i~G~--vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 399 -GVLVGKGGIHGN--VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred -Ceeeecccccce--EEEecCCeeccHHHHHHHHHHH
Confidence 999977666644 99999887 999997777644
No 331
>PRK06149 hypothetical protein; Provisional
Probab=99.80 E-value=5.3e-17 Score=163.02 Aligned_cols=292 Identities=15% Similarity=0.139 Sum_probs=181.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHH-HhcC-----C--------eEEEecccCCC--Ccc-
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMA-RIAD-----A--------TPVILPTRISE--NFL- 96 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~-~~~g-----~--------~v~~i~~~~~~--~~~- 96 (352)
.+.+++++||++|++.+++... ....+|+.....|++..... ...+ . .+..++.+... .+.
T Consensus 641 ~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~ 720 (972)
T PRK06149 641 LDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRG 720 (972)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCC
Confidence 3689999999999999998532 22356777777777644222 1100 0 12223322110 111
Q ss_pred cC-----HHHHHhhc------cCCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 97 LD-----PKVLESKL------TEKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 97 ~d-----~~~l~~~l------~~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
.+ .+.+++.+ .+++.++++.......| ..+|++.++++.++|++| |+++|+||++.+++..|.....
T Consensus 721 ~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~-g~llI~DEV~tGfGRtG~~~~a 799 (972)
T PRK06149 721 ADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR-GGVCIADEVQVGYGRLGHYFWG 799 (972)
T ss_pred cccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEEeehhcCCccCccchh
Confidence 11 13333322 13566777766665555 556788999999999999 9999999999988776643222
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh-hhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+...... .-+.+++|.+| +|.++|++++++++.+.+... ....+++.|++..+++.+.|+.-. ++ ++.+
T Consensus 800 ~e~~gv~----PDivt~gK~lg-~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~--~e---~l~~ 869 (972)
T PRK06149 800 FEQQGVV----PDIITMAKGMG-NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLR--EE---KLQE 869 (972)
T ss_pred hhhcCCC----CCEEEeccccc-CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHH--hc---CHHH
Confidence 2222221 22457899998 889999999999998887641 223456789999999999987521 11 2333
Q ss_pred HHHHHHHHHHHHhc----ccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 244 AFRERRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 244 ~~~~~~~~l~~~l~----~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+.+++-+++.+.|+ +.|.+..+. ..|.++.+++.......... ......+.+.++++ ||.+.+.+. ..+
T Consensus 870 ~~~~~G~~l~~~L~~l~~~~~~i~~vr-G~Gl~~gvel~~~~~~~~~~---~~~~~~i~~~l~~~-Gvl~~~~g~--~~~ 942 (972)
T PRK06149 870 NARRVGDHLKARLEALADRHPLIGAVH-GMGLYLGVELVRDRQTLEPA---TEETAAICDRLLEL-GVIMQPTGD--HLN 942 (972)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEe-ecceEEEEEEecCcccCCCC---hHHHHHHHHHHHhC-CeEEeecCC--CCC
Confidence 44444444444444 343333333 34555666653211000000 00245788888876 999977431 147
Q ss_pred eEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 320 CIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 320 ~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
.+|+.++. +++++++++++|.+++.+
T Consensus 943 vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 943 ILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 89998885 999999999999999875
No 332
>PLN02880 tyrosine decarboxylase
Probab=99.80 E-value=6.1e-17 Score=150.68 Aligned_cols=324 Identities=12% Similarity=0.069 Sum_probs=210.2
Q ss_pred CCCCCChhhhccchhhHHHHHHHH-hcCCCCC-----CCcEEEeCChHHHHHHHHHHhcC-----------CCCEEEecC
Q 018665 5 RVSQGTLQMRVLWSFVQQFVINLK-ENGLSYT-----PDQILVSNGAKQSILQAVLAVCS-----------PGDEVIIPA 67 (352)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~-----~~~i~~~~g~~~a~~~~~~~l~~-----------~~~~vl~~~ 67 (352)
...+...+++ +.+-+++. -.|.+-. ...-.+|+|+|+++..++.+... +.-.|++.+
T Consensus 115 ~~sp~~~~lE------~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~ 188 (490)
T PLN02880 115 ITSPAATELE------MIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASD 188 (490)
T ss_pred ccCcccHHHH------HHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcC
Confidence 3445666777 77777777 5565421 12357789999998877766421 112455677
Q ss_pred CCCCChHHHHHhcCCe---EEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHH
Q 018665 68 PFWVSYPEMARIADAT---PVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIV 138 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~---v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~ 138 (352)
-.|.++..++...|+. ++.||++..+++.+|++.|++++.+ .+.+|+.+..+..+|.+.| +++|+++|
T Consensus 189 ~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~ 265 (490)
T PLN02880 189 QTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIA 265 (490)
T ss_pred CchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHH
Confidence 8899999999999984 7889987655678999999999953 2445555566789999999 99999999
Q ss_pred HhCCCEEEEecccccccccCCCCc-cccccCCCCCCceEEEeccccccccccceeEEEEcChh--HHHHHHhhhhcc---
Q 018665 139 AKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACNKIQSQF--- 212 (352)
Q Consensus 139 ~~~~~~~livD~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~--~~~~~~~~~~~~--- 212 (352)
+++ |++++||.+|+++...-... ..+..+ ..-+.+..++||+++ ....+|+++.++. +++.+.....+-
T Consensus 266 ~~~-~iwlHVDaA~gg~~~~~~~~~~~l~gi---e~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~ 340 (490)
T PLN02880 266 KSN-GMWFHVDAAYAGSACICPEYRHYIDGV---EEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNK 340 (490)
T ss_pred HHc-CCEEEEehhhHHHHHhCHHHHHHhcCc---hhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCc
Confidence 999 99999999999864321100 012221 123478889999996 6678898887542 223221111000
Q ss_pred ----c-------c---CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecC
Q 018665 213 ----T-------S---GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 278 (352)
Q Consensus 213 ----~-------~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~ 278 (352)
. + ....+....+...+.. .+.+.+++...+.-++.+++.+.+++.++++++.+.....+.++++
T Consensus 341 ~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~--~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~ 418 (490)
T PLN02880 341 ASQANSVVDYKDWQIPLGRRFRSLKLWMVLRL--YGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLV 418 (490)
T ss_pred cccccCCCChhccCcCCCCcccHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEe
Confidence 0 0 0011111112112222 2356777777777789999999999888999887655555666665
Q ss_pred CccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHHHhhhCC
Q 018665 279 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~~~ 348 (352)
..... .... ..-..++.++|.+++.+.+... ......++|+++.. ++++++.+++.|.+..+++..
T Consensus 419 ~~~~~-~~~~--~~~n~~l~~~l~~~g~~~v~~t-~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 419 PPKNN-EDNG--NKLNHDLLDAVNSSGKIFISHT-VLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred CCCCC-hhhH--HHHHHHHHHHHHhCCCEEEEEE-EECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 32100 0000 0012457777777766666553 33446799999876 669999999999998877644
No 333
>PRK15029 arginine decarboxylase; Provisional
Probab=99.80 E-value=6.1e-17 Score=155.02 Aligned_cols=232 Identities=12% Similarity=0.077 Sum_probs=156.8
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
|..-..+.+ +..|+.++ .....++++|+|.++..++.+++++||+|+++..||.+..+++...|..++
T Consensus 203 p~G~I~eAq------~~aA~~fg------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pv 270 (755)
T PRK15029 203 HTGAFGESE------KYAARVFG------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPV 270 (755)
T ss_pred CCcHHHHHH------HHHHHHhC------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEE
Confidence 444455677 88899887 678899999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCc----ccC-----HHHHHhhccC--Cee--------EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEE
Q 018665 86 ILPTRISENF----LLD-----PKVLESKLTE--KSR--------LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 146 (352)
Q Consensus 86 ~i~~~~~~~~----~~d-----~~~l~~~l~~--~~~--------~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~l 146 (352)
+++... ..+ .++ ++.++++++. ..+ ++++++|++ .|.+.+ +++|+++|+++ ++++
T Consensus 271 yl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~-~~~l 344 (755)
T PRK15029 271 YMVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKT-SDRL 344 (755)
T ss_pred Eecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhc-CCeE
Confidence 997543 222 234 8899988853 223 888899876 689999 99999999999 9999
Q ss_pred Eeccccccc-ccCCCCcc-ccccC---CCCCCceEEEeccccccccccce-eEEEEcChh--HH--HHHHhh-hhccccC
Q 018665 147 LSDEIYEHI-IYAPATHT-SFASL---PGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKH--FV--AACNKI-QSQFTSG 215 (352)
Q Consensus 147 ivD~~~~~~-~~~~~~~~-~~~~~---~~~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~--~~--~~~~~~-~~~~~~~ 215 (352)
++||||+.. .|.+..+. +.... ......++++.|.||.++ ++. .+++-.+.+ .+ ++++.. ....+.+
T Consensus 345 lvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~--alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTS 422 (755)
T PRK15029 345 HFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTS 422 (755)
T ss_pred EEECccccccccCccccccccccccccccCCCceEEEEchhhccc--chhhhhhheeCCCccccCHHHHHHHHHHHcCCC
Confidence 999999853 22221111 11100 101123499999999984 444 444444322 22 344433 3334455
Q ss_pred CChHHHHHHHHHhcccCCChH-HHHHHHHHHHHHHHHHHHHhcccC
Q 018665 216 ASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELE 260 (352)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 260 (352)
||.+.++.+-.+... ... ..+++.+.+.+....+++.+.+++
T Consensus 423 PSY~LmASLD~ar~~---m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 423 PLYAICASNDVAVSM---MDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred cHHHHHHHHHHHHHH---HhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 666655555444432 121 334455555555666666665543
No 334
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=1.6e-16 Score=147.13 Aligned_cols=296 Identities=15% Similarity=0.116 Sum_probs=180.3
Q ss_pred cEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-cC------------CeEEEecccCCCC--cc----
Q 018665 38 QILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD------------ATPVILPTRISEN--FL---- 96 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~g------------~~v~~i~~~~~~~--~~---- 96 (352)
.+++++|+++|++.+++... ...++|+.....|++....+.. .+ ..+..+|.+.... +.
T Consensus 123 ~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T PRK06931 123 LQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGE 202 (459)
T ss_pred EEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCch
Confidence 34677999999999998742 2346788888888877644332 11 1233333331100 00
Q ss_pred cCHHHH----Hhhcc------CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 97 LDPKVL----ESKLT------EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 97 ~d~~~l----~~~l~------~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
-+.+.+ ++.++ +++.++++...+...|.. .|.+.++++.++|+++ |+++|.||++.++..+|.. ...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~-g~LlI~DEV~tGfGRtG~~-~a~ 280 (459)
T PRK06931 203 AGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH-GILLIVDEVQAGFARTGKM-FAF 280 (459)
T ss_pred hHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecchhcCCcCchH-HHh
Confidence 122222 22222 246777777766666765 5788999999999999 9999999999998776642 222
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 245 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (352)
....- ..-+.+++|.+| +|+++|.++.++++ +.+.......+++.|+++.+++.+.++.-.. ++..++..+.-
T Consensus 281 ~~~gv----~PDivt~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~-~~l~~~~~~~G 353 (459)
T PRK06931 281 EHAGI----EPDIIVMSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKE-ENLAQNAAERG 353 (459)
T ss_pred hhcCC----CCCEEEeccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHH
Confidence 22221 122666789998 78999998887664 6554344556788999999999999875211 22333333333
Q ss_pred HHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCC-cccCCCC--CCChHHHHHHHHHccCEEeccCCCCCCCCeEE
Q 018665 246 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFGK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIR 322 (352)
Q Consensus 246 ~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iR 322 (352)
...++.|.+..++.|.+.-+. ..|.++.+++.+.... ...+... ......+.+.++++ |+.+.+... ..+.+|
T Consensus 354 ~~l~~~L~~l~~~~~~i~~vr-G~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~--~~~~l~ 429 (459)
T PRK06931 354 EWLKAQLAELQKRYPCIGNVR-GRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN-GLLLERGGR--NGNVVR 429 (459)
T ss_pred HHHHHHHHHHHHhCCCeEeEe-cCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC-CcEEeecCC--CCCEEE
Confidence 333444443333443333333 3455566666321100 0000000 00134577777765 899876432 257889
Q ss_pred EEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 323 ISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 323 i~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+.++. +++|+++++++|.+++.++
T Consensus 430 ~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 430 LLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred EECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 88876 9999999999999999765
No 335
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.79 E-value=2.4e-18 Score=153.80 Aligned_cols=240 Identities=20% Similarity=0.226 Sum_probs=158.0
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
|..-..+.+ +.+|+.++ ..+..++++|+|.++..++.+++++||+|+++..+|.+...++...|..++
T Consensus 64 p~G~I~eAe------~~aA~~fG------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pv 131 (417)
T PF01276_consen 64 PEGIIKEAE------ELAARAFG------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPV 131 (417)
T ss_dssp TBTHHHHHH------HHHHHHHT------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEE
T ss_pred CccHHHHHH------HHHHHhcC------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEE
Confidence 333445677 88999987 678899999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCc----ccCH-----HHHHhhccC--C---eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 86 ILPTRISENF----LLDP-----KVLESKLTE--K---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 86 ~i~~~~~~~~----~~d~-----~~l~~~l~~--~---~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+++.. ...+ .+++ +.+++++++ . ++++++++|++ .|.+.+ +++|+++|+++ +++|+||||
T Consensus 132 yi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~-~~~llvDEA 205 (417)
T PF01276_consen 132 YIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKH-GIPLLVDEA 205 (417)
T ss_dssp EEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCT-ECEEEEE-T
T ss_pred EecCC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhccc-CCEEEEEcc
Confidence 99876 3322 3566 889888863 3 34589999976 689999 99999999999 999999999
Q ss_pred cccc-ccCCCCccccccCCCC---CCceEEEeccccccccccceeEEEEcChhH---HHHHHhh-hhccccCCChHHHHH
Q 018665 152 YEHI-IYAPATHTSFASLPGM---WERTLTVNGFSKAFAMTGWRLGYIAGPKHF---VAACNKI-QSQFTSGASSISQKA 223 (352)
Q Consensus 152 ~~~~-~~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~ 223 (352)
|+.. .|. ..+.+...+..+ .+.++++.|.+|.++ +=...+++..+.+. .++++.. ....+.+||.+.++.
T Consensus 206 hGah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~-altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmAS 283 (417)
T PF01276_consen 206 HGAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLP-ALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMAS 283 (417)
T ss_dssp T-TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSS-S-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHH
T ss_pred ccccccCC-CCccchhhccCccccccceeeeechhhccc-ccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHH
Confidence 9853 222 222233333222 346699999999984 32345666544432 3444443 334455677766666
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHh---cccCCceecCC
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF---GELEGVKMSEP 267 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~g~~~~~~ 267 (352)
+-.+... +....-+++.++..++...+++.+ +++.++++..+
T Consensus 284 lD~a~~~--m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 284 LDVARAQ--MEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp HHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred HHHHHHH--HhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence 5555443 112334455555555666666666 55556665533
No 336
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.79 E-value=7e-17 Score=143.89 Aligned_cols=267 Identities=16% Similarity=0.127 Sum_probs=167.9
Q ss_pred CChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HH-------HhcCCeEEEecccCCCCcccCHHHHHhhcc-CCee
Q 018665 43 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MA-------RIADATPVILPTRISENFLLDPKVLESKLT-EKSR 111 (352)
Q Consensus 43 ~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~-------~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~ 111 (352)
-|++.|+..++.+|+++||+|+..+..+.++.. .. .....+++.+++++ ++..+|.|++++.++ .+|+
T Consensus 93 ~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~-~~~~ID~d~l~~~a~~~kPk 171 (399)
T PF00464_consen 93 HSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDP-DTGLIDYDELEKLAKEHKPK 171 (399)
T ss_dssp SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-T-TTSSB-HHHHHHHHHHH--S
T ss_pred CCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeec-CCCeECHHHHHHHHhhcCCC
Confidence 567789999999999999999988876655542 11 22456788888875 345799999999886 4899
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCccccccCCCCCCceEEEeccccccccccc
Q 018665 112 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 190 (352)
Q Consensus 112 ~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 190 (352)
+|++....+| ..+| ++++.++|++. |.++++|.+|. ++...|..+.++.. . +++++|.+|+| +|.
T Consensus 172 lIi~G~S~y~--~~~d---~~~~reIad~v-ga~l~~D~sH~~GLIa~g~~~~P~~~-A-----Dvvt~sThKtl--~GP 237 (399)
T PF00464_consen 172 LIICGASSYP--RPID---FKRFREIADEV-GAYLMADISHIAGLIAGGLFPNPFPY-A-----DVVTGSTHKTL--RGP 237 (399)
T ss_dssp EEEEE-SSTS--S------HHHHHHHHHHT-T-EEEEE-TTTHHHHHTTSS--GCCT-S-----SEEEEESSGGG---SS
T ss_pred EEEECchhcc--CccC---HHHHHHHHHhc-CcEEEecccccccceehheecCcccc-c-----eEEEeeccccc--ccc
Confidence 9887665544 3445 89999999999 99999999987 34444444444432 2 29999999998 788
Q ss_pred eeEEEEcC--------------hhHHHHHHhhhhcccc-CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHH
Q 018665 191 RLGYIAGP--------------KHFVAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 255 (352)
Q Consensus 191 ~~g~l~~~--------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (352)
|.|.|+++ +++.+++.+..-+... ++..-..++.+.++... ....+.+-.+++-++.+.|.+.
T Consensus 238 rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea--~~~~fk~Ya~qVv~NAk~La~~ 315 (399)
T PF00464_consen 238 RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEA--LSPEFKEYAKQVVKNAKALAEA 315 (399)
T ss_dssp S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 7788888765433332 23333344444444431 1344577788888999999999
Q ss_pred hcccCCceecC-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-----CCCeEEEEeec--
Q 018665 256 FGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRISYAA-- 327 (352)
Q Consensus 256 l~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-----~~~~iRi~~~~-- 327 (352)
|.+. |+.++. ......+++++.... .++.+..+.|. +.||.+......+ .+..+||....
T Consensus 316 L~~~-G~~v~~ggTd~H~vlvd~~~~~----------~~g~~a~~~Le-~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT 383 (399)
T PF00464_consen 316 LQER-GFKVVTGGTDNHQVLVDLRSFG----------IDGKEAEKALE-EAGIIVNKNTIPGDRSPFVPSGLRLGTPALT 383 (399)
T ss_dssp HHHT-T-EEGGGS-SSSEEEEEGGGGT----------S-HHHHHHHHH-HTTEE-EEE--TTTSTTTT-SEEEEESHHHH
T ss_pred HhhC-CcEEEECCCCCCeEEEEecccc----------cchHHHHHHHH-hcCeeecccccCCCCCCCCCCEEEECCHHHH
Confidence 9987 998874 344566888886531 15566655555 5699886443322 24579999865
Q ss_pred ----CHHHHHHHHHH
Q 018665 328 ----SLTTLQAAVER 338 (352)
Q Consensus 328 ----~~~~l~~~~~~ 338 (352)
.++|+++..+.
T Consensus 384 ~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 384 RRGMKEEDMKEIAEL 398 (399)
T ss_dssp HTT--HHHHHHHHHH
T ss_pred hCCCCHHHHHHHHhh
Confidence 55677666554
No 337
>PRK04311 selenocysteine synthase; Provisional
Probab=99.79 E-value=1.5e-16 Score=146.20 Aligned_cols=291 Identities=18% Similarity=0.154 Sum_probs=189.6
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC------hHHHHHhcCCeEEEecccCC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS------YPEMARIADATPVILPTRIS 92 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~------~~~~~~~~g~~v~~i~~~~~ 92 (352)
+++.+|++++ .+..++++++++|+..++.++ .+||+|++++..+.. +...++..|+++++++...
T Consensus 132 ~e~~lA~l~G-------ae~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~- 202 (464)
T PRK04311 132 LAALLCALTG-------AEDALVVNNNAAAVLLALNAL-AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN- 202 (464)
T ss_pred HHHHHHHHhC-------CCeEEEECCHHHHHHHHHHHh-CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC-
Confidence 3488888875 456788899999999888665 788999998864431 2346678899999997542
Q ss_pred CCcccCHHHHHhhccCCeeEEEEcCCCCC--cc--cCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC----CCccc
Q 018665 93 ENFLLDPKVLESKLTEKSRLLILCSPSNP--TG--SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP----ATHTS 164 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~~~~~i~i~~p~np--tG--~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~----~~~~~ 164 (352)
..++++++++++++++++++++++|+ +| ...| +++|+++|+++ |+++|+|.+.+.+.-.+ ...+.
T Consensus 203 ---~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~d---l~eI~~lak~~-gi~vivD~gsG~l~~~~~~gl~~~p~ 275 (464)
T PRK04311 203 ---RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVS---LAELAALGKEH-GLPVVYDLGSGSLVDLSQYGLPDEPT 275 (464)
T ss_pred ---CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCC---HHHHHHHHHHc-CCeEEEECCCcccccchhccCCCCCc
Confidence 24789999999999999999999997 34 5678 99999999999 99999999644321000 00111
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCCh---------
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG--------- 235 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------- 235 (352)
+... ...+.++++.|.+|.+|.+ ..|++++++++++++++...............+..+.+.......
T Consensus 276 ~~~~-l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l 352 (464)
T PRK04311 276 VQEL-LAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTL 352 (464)
T ss_pred hhhH-HhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHH
Confidence 1111 1135569999999998623 589999999999887743222223344445555555554211000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccC--C--ceecCC----------C---CceEEEeecCCccCCcccCCCCCCChHHHH
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELE--G--VKMSEP----------Q---GAFYLFIDFSTYYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~--g--~~~~~~----------~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
..+....++..++.+.+.+.|+..+ + +.+... . .++.+.++... .++.++.
T Consensus 353 ~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~------------~~~~~l~ 420 (464)
T PRK04311 353 RLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKD------------RSLEALA 420 (464)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCC------------CCHHHHH
Confidence 1122233556667777888887653 2 233322 0 12223333221 1678898
Q ss_pred HHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHh
Q 018665 299 RYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~ 344 (352)
++|.+. ...|... -.++.+.+.+-. .++|++.+++.|++++.
T Consensus 421 ~~lr~~-~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 421 ARLRLL-PPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred HHHhcC-CCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 888753 3333321 247788888877 88999999999988764
No 338
>PLN02590 probable tyrosine decarboxylase
Probab=99.78 E-value=2.3e-16 Score=146.96 Aligned_cols=324 Identities=12% Similarity=0.065 Sum_probs=212.7
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCC-----CCcEEEeCChHHHHHHHHHHhcC-----------CCCEEEec
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYT-----PDQILVSNGAKQSILQAVLAVCS-----------PGDEVIIP 66 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~-----~~~i~~~~g~~~a~~~~~~~l~~-----------~~~~vl~~ 66 (352)
|...+...+++ +.+-+++. -.|.+-. ...=.+++|+|+++..++.+... +.-.|++.
T Consensus 162 ~~~sPa~t~lE------~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S 235 (539)
T PLN02590 162 WLTSPAATELE------IIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGS 235 (539)
T ss_pred cccCchhHHHH------HHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEec
Confidence 44566677777 88888888 6666522 13356689999998877766422 11145566
Q ss_pred CCCCCChHHHHHhcCC---eEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHH
Q 018665 67 APFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARI 137 (352)
Q Consensus 67 ~~~~~~~~~~~~~~g~---~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~ 137 (352)
+..|.++..+++..|+ +++.+|++..+++.+|++.|++++.+ .+.+|+.+..+..+|.+-| +++|+++
T Consensus 236 ~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i 312 (539)
T PLN02590 236 DQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNI 312 (539)
T ss_pred CCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHH
Confidence 7789999999999998 58899987555678999999999954 2445555556788999999 9999999
Q ss_pred HHhCCCEEEEecccccccccCCCCccc-cccCCCCCCceEEEeccccccccccceeEEEEcChh--HHHHHHhhhhc---
Q 018665 138 VAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACNKIQSQ--- 211 (352)
Q Consensus 138 ~~~~~~~~livD~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~--~~~~~~~~~~~--- 211 (352)
|+++ |+++.||.+|+++...-..... +..+ ..-+-+..++||++. ....+|.++..+. +.+.+.....+
T Consensus 313 ~~~~-g~WlHVDaA~GG~al~~~~~r~~~~Gi---e~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~ 387 (539)
T PLN02590 313 AKKY-GIWLHVDAAYAGNACICPEYRKFIDGI---ENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEF 387 (539)
T ss_pred HHHh-CCeEEEecchhhhhhcChhhHHHhcCC---ccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCC
Confidence 9999 9999999999986532111111 1111 122366788999997 6678888876543 33333211000
Q ss_pred -------------cccCC-ChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeec
Q 018665 212 -------------FTSGA-SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 277 (352)
Q Consensus 212 -------------~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~ 277 (352)
++... -.+....+..++.. .+.+.+++.+++.-++.+++.+.+++.|+++++.+..-..+.+++
T Consensus 388 ~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~--~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~ 465 (539)
T PLN02590 388 KVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRL--YGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRL 465 (539)
T ss_pred cccccccCCCccccCCCCCCchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEe
Confidence 01111 11222222222222 246788889999999999999999999899988765544455554
Q ss_pred CCc-cCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHHHhhhCC
Q 018665 278 STY-YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 278 ~~~-~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~~~ 348 (352)
... .+.... ..-..++.++|.+...+.+.+ +......++|+++.. ++++++.+++.|.+..+++.+
T Consensus 466 ~~~~~~~~~~----~~ln~~l~~~l~~~G~~~vs~-t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 466 APVDGDEDQC----NERNRELLAAVNSTGKIFISH-TALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred cCCCCCHHHH----HHHHHHHHHHHHhCCCEEEEe-eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 321 000000 002346777777765555544 333345689999876 789999999999998877654
No 339
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=2.9e-16 Score=135.27 Aligned_cols=282 Identities=15% Similarity=0.104 Sum_probs=192.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH---HhcC--CeEEEecccCCCCcccCHHHHHhhcc-
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIAD--ATPVILPTRISENFLLDPKVLESKLT- 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~---~~~g--~~v~~i~~~~~~~~~~d~~~l~~~l~- 107 (352)
.+..++...+|+ .|+..++.+++++||+|+-.+-.+.++...- -..| ++++.++++. ++..+|.|++++...
T Consensus 87 a~~anVQPhSGs-~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~-et~~IDyD~~~k~a~e 164 (413)
T COG0112 87 AEYANVQPHSGS-QANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDP-ETGLIDYDEVEKLAKE 164 (413)
T ss_pred CCccccCCCCch-HHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccccc-ccCccCHHHHHHHHHH
Confidence 455677666655 6788899999999999997776666555322 1122 5777788875 345699999999886
Q ss_pred CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCccccccCCCCCCceEEEeccccccc
Q 018665 108 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 186 (352)
Q Consensus 108 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 186 (352)
.+|++|+.-...+| ...| ++++.++|++- |.++++|-+|- ++...|..+.++.. -.++++|.+|+|
T Consensus 165 ~kPK~ii~G~SaY~--r~id---~~~~reIad~V-GA~L~~DmAHiaGLVA~G~~p~P~~~------AdvVTtTTHKTl- 231 (413)
T COG0112 165 VKPKLIIAGGSAYS--RPID---FKRFREIADEV-GAYLMVDMAHVAGLIAGGVHPNPLPH------ADVVTTTTHKTL- 231 (413)
T ss_pred hCCCEEEECccccc--cccC---HHHHHHHHHHh-CceEEehHHHHHHHHhcccCCCCCCc------cceEeCCcccCC-
Confidence 48898886444333 4556 88999999999 99999999987 34444443334332 339999999998
Q ss_pred cccceeEEEEcCh-hHHHHHHhhhhccccCCChH-HHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCcee
Q 018665 187 MTGWRLGYIAGPK-HFVAACNKIQSQFTSGASSI-SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 264 (352)
Q Consensus 187 ~~g~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 264 (352)
.|.|.|.|.++. ++.+++.+..-+...+.+.+ ..++.+-++.. .....+++-.+++-++.+.|.+.|.+. |+++
T Consensus 232 -rGPrGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~E--al~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~v 307 (413)
T COG0112 232 -RGPRGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKE--ALEPEFKEYAKQVVKNAKALAEALKER-GFKV 307 (413)
T ss_pred -CCCCceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHH--HcChhHHHHHHHHHHHHHHHHHHHHHc-CCeE
Confidence 788999999885 78888876432222233322 23222333332 124556777888888999999999987 9998
Q ss_pred cCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC------CCeEEEEeec------CHHH
Q 018665 265 SEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------DTCIRISYAA------SLTT 331 (352)
Q Consensus 265 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~------~~~iRi~~~~------~~~~ 331 (352)
+.. .....+.+++.... .+..+..+. +.+.||.+.-.....+ +..+||..+. .++|
T Consensus 308 vsGgTdnHl~lVDl~~~~----------~~Gk~ae~~-L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e 376 (413)
T COG0112 308 VSGGTDNHLVLVDLRSKG----------LTGKKAEAA-LERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAE 376 (413)
T ss_pred ecCCccceEEEEEcccCC----------CCHHHHHHH-HHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHH
Confidence 853 33445667776311 145555544 5456898866554433 3579998754 6689
Q ss_pred HHHHHHHHHHHHhh
Q 018665 332 LQAAVERIKKGLLT 345 (352)
Q Consensus 332 l~~~~~~l~~~~~~ 345 (352)
+++..+.|.+++..
T Consensus 377 ~~~Ia~~I~~vl~~ 390 (413)
T COG0112 377 MEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999988888865
No 340
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.78 E-value=9.6e-17 Score=152.16 Aligned_cols=311 Identities=15% Similarity=0.107 Sum_probs=188.3
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH-HHhcCCeEEE
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATPVI 86 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~-~~~~g~~v~~ 86 (352)
.-..+.+ +.+|+.++ .....+++||+|.++..++.+++++||.||++..||.+..+. +...|..+++
T Consensus 174 G~i~eAq------~~AA~~fg------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVY 241 (720)
T PRK13578 174 GAAKDAQ------KHAAKVFN------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVY 241 (720)
T ss_pred hHHHHHH------HHHHHHhC------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEE
Confidence 3345666 88888886 677899999999999999999999999999999999999985 8999999999
Q ss_pred ecccCCCCcc----cCHH-----HHHhhccCC----------eeEEEEcCCCCCcccCCCHHHHHHHHHH-HHhCCCEEE
Q 018665 87 LPTRISENFL----LDPK-----VLESKLTEK----------SRLLILCSPSNPTGSVYPKNLLDEIARI-VAKHPRLLV 146 (352)
Q Consensus 87 i~~~~~~~~~----~d~~-----~l~~~l~~~----------~~~i~i~~p~nptG~~~~~~~l~~l~~~-~~~~~~~~l 146 (352)
+.... +.++ ++++ .+++++++. .+++++.+|++ .|.+.+ ++.|+++ ++.+ + +|
T Consensus 242 l~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~-~-~l 314 (720)
T PRK13578 242 LETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLC-D-YI 314 (720)
T ss_pred eeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccC-C-cE
Confidence 97654 2232 4544 488887643 47888888876 689999 8899888 6777 7 99
Q ss_pred Eecccccccc-cCCC---CccccccCCCCCCceEEEeccccccccccce-eEEEEcChhHH---------HHHHhh-hhc
Q 018665 147 LSDEIYEHII-YAPA---THTSFASLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFV---------AACNKI-QSQ 211 (352)
Q Consensus 147 ivD~~~~~~~-~~~~---~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~~~---------~~~~~~-~~~ 211 (352)
++||||+... |.+. .+.+......+.+-++++.|.||.+ +++. .+++-.+...+ +++... ...
T Consensus 315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~ 392 (720)
T PRK13578 315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLH 392 (720)
T ss_pred EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcCCcccccccccCCHHHHHHHHHHH
Confidence 9999998532 2221 1112222333334569999999998 4443 44554443322 334333 223
Q ss_pred cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHh-cccCCceecCCC----------------------
Q 018665 212 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF-GELEGVKMSEPQ---------------------- 268 (352)
Q Consensus 212 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~g~~~~~~~---------------------- 268 (352)
.+.+|+.+..+.+-.+-.. +.....+++.+.+.+....+++.+ +.++++++..|.
T Consensus 393 qSTSPsY~LmASLDva~~~--m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w 470 (720)
T PRK13578 393 ASTSPFYPLFAALDVNAKM--HEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFF 470 (720)
T ss_pred cCCChHHHHHHHHHHHHHH--HHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccccc
Confidence 3344554444433332211 001122333444444444455544 333344433211
Q ss_pred ---------------------CceEEEeecCCccCCcccCCC-CCCChHHHHHHHHHccCEEeccCCCCCCCCe--EEEE
Q 018665 269 ---------------------GAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTC--IRIS 324 (352)
Q Consensus 269 ---------------------~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~--iRi~ 324 (352)
.-.-+.+.+++.. ...+.+. .+..+..+.+.|.++ ||.+.-.+ ... +-++
T Consensus 471 ~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~-~~~G~~~~~Gipg~~l~~~L~e~-gI~~E~~d----~~~vL~l~s 544 (720)
T PRK13578 471 SFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGID-AETGEYEDFGIPATILANYLREN-GIVPEKCD----LNSILFLLT 544 (720)
T ss_pred ccccCccccccccccccccccCCceEEEEcCCcC-cccccccccCccHHHHHHHHHHc-CCEEEecC----CCeEEEEeC
Confidence 0001222222210 0000000 011367888888777 88876543 333 3445
Q ss_pred eecCHHHHHHHHHHHHHHHhhhC
Q 018665 325 YAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 325 ~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
++.++++++++++.|.++.+.+.
T Consensus 545 ~g~t~~~~~~Lv~aL~~f~~~~~ 567 (720)
T PRK13578 545 PAEDMAKLQQLVAMLARFEKHIE 567 (720)
T ss_pred CCCCHHHHHHHHHHHHHHHHhhc
Confidence 55588999999999998866443
No 341
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=8.8e-17 Score=134.53 Aligned_cols=288 Identities=16% Similarity=0.179 Sum_probs=194.7
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc------C--C-C-CEEEecCCCCCC-hH---------HHHH
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC------S--P-G-DEVIIPAPFWVS-YP---------EMAR 78 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~--~-~-~~vl~~~~~~~~-~~---------~~~~ 78 (352)
|.+.+++++ .-+.++.++.+.+|.+.+++... + + + ..|+....+|++ .. +..+
T Consensus 106 f~~~vt~lf-------~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~ 178 (427)
T KOG1402|consen 106 FAEYVTKLF-------GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWD 178 (427)
T ss_pred HHHHHHHhc-------CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhh
Confidence 335555554 46788889999999998887643 1 2 1 245544444443 21 1223
Q ss_pred hcCCe----EEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 79 IADAT----PVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 79 ~~g~~----v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.+|.- +..+|. -|.+.|+.++++ +.++.++..-+...|.+. |+..+++..++|.+| |+++|.||++
T Consensus 179 ~fgp~~P~~~~~v~Y-------~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky-nvl~I~DEvQ 250 (427)
T KOG1402|consen 179 GFGPFLPGVVDKVPY-------GDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY-NVLLIADEVQ 250 (427)
T ss_pred ccCCCCCCcceeecc-------CCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhh-cEEEEehhhh
Confidence 33321 223332 278999999975 555656665588888664 566899999999999 9999999999
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccC
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
.+++.+|+.. ......-.++ +--+.|+++.+-.+++.++++++++..+....+..+++.|+++.+++.++++.
T Consensus 251 TGl~RTGk~l--a~d~env~PD---ivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalev-- 323 (427)
T KOG1402|consen 251 TGLARTGKLL--ACDYENVRPD---IVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEV-- 323 (427)
T ss_pred hcccccCcEE--EeehhhcCCC---eEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHH--
Confidence 9998877522 1111111222 23356999733469999999999999999888889999999999999999985
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhccc----CC-ceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGEL----EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
-.-+.+.++.+..-..++.+|.++ |+ ++.+. ..|.+..+.+-.. +.+++ ++.+++-.+.++ |+
T Consensus 324 ---i~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VR-GrGl~~ai~i~~~---~~~~~----~aw~~cl~lk~~-g~ 391 (427)
T KOG1402|consen 324 ---IVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVR-GRGLLNAIVINPS---KTSGQ----DAWDVCLALKEN-GL 391 (427)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhccccccchhheee-ccceEEEEEeccc---cccch----hHHHHHHccccc-cc
Confidence 223455566666777788888776 22 23333 3355555544211 11111 677888777755 87
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
+--|- ..+-+|+.++. +++|++++++++.+.+.
T Consensus 392 LAkpt----H~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 392 LAKPT----HGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ccCCC----CCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 76653 35689999988 99999999999999874
No 342
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.78 E-value=3.2e-16 Score=144.60 Aligned_cols=282 Identities=12% Similarity=0.141 Sum_probs=172.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhc----------C----CCCEEEecCCCCCChHHH-HHhcCCeE-----------EEecc
Q 018665 36 PDQILVSNGAKQSILQAVLAVC----------S----PGDEVIIPAPFWVSYPEM-ARIADATP-----------VILPT 89 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~----------~----~~~~vl~~~~~~~~~~~~-~~~~g~~v-----------~~i~~ 89 (352)
-+.+++++||++|++.+++... . ...+|+....+|++.... +...+... ..++.
T Consensus 110 ~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08297 110 LPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 189 (443)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCC
Confidence 3689999999999999998752 1 125788888888876543 32222110 00111
Q ss_pred cCC------CC---c----ccCHHHHHhhcc---CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 90 RIS------EN---F----LLDPKVLESKLT---EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 90 ~~~------~~---~----~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
+.. .+ . .-+++++++.+. +++.++++...+...|.. +|.+.+++|.++|++| |+++|.||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~-g~llI~DEV~ 268 (443)
T PRK08297 190 PKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH-DALLIFDEVQ 268 (443)
T ss_pred CCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechh
Confidence 100 00 0 012455556663 577888887777666754 6788999999999999 9999999999
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHH-----hhhhccccCCChHHHHHHHHH
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN-----KIQSQFTSGASSISQKAGVAA 227 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 227 (352)
.++..+|... ........+| +.+++|.++ +|.+++.+++.+... ......+++.|++...++.++
T Consensus 269 tGfGRtG~~~-a~~~~gv~PD----iv~~gK~l~-----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~ 338 (443)
T PRK08297 269 TGVGLTGTAW-AYQQLGVRPD----IVAFGKKTQ-----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRI 338 (443)
T ss_pred hccCccchHH-HHHhcCCCCC----EEEeccccc-----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHH
Confidence 9887765421 1111111112 445789874 234444444322111 112456778899999999999
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCce-ecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccC
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 306 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 306 (352)
++.-.. ++..+++.+.-+..++.+.+..++.+.+. .+. ..|.++.+++++.. ....+.+.|.++ |
T Consensus 339 L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr-g~G~~~~i~~~~~~-----------~~~~~~~~l~~~-G 404 (443)
T PRK08297 339 LEVIEE-DGLVENAARQGEYLLARLEELAAEFPAVVSNVR-GRGLMCAFDLPTTA-----------DRDEVIRRLWEE-G 404 (443)
T ss_pred HHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeee-ccceEEEEEecCHH-----------HHHHHHHHHHHC-C
Confidence 875211 22233333333333333333333344332 223 34677778875421 356788888865 9
Q ss_pred EEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 307 VALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 307 i~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
|.+.|++ ...+|++++. +++|+++++++|.++++++
T Consensus 405 vl~~~~~----~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 405 VLVLPCG----ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EEEecCC----CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 9998753 3578887665 9999999999999999764
No 343
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=2.1e-16 Score=136.33 Aligned_cols=291 Identities=12% Similarity=0.046 Sum_probs=191.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCC--------CCEEEecCCCCC-ChHHHHHhcCCeEEEecccCCCC-----cccCHH
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSP--------GDEVIIPAPFWV-SYPEMARIADATPVILPTRISEN-----FLLDPK 100 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~--------~~~vl~~~~~~~-~~~~~~~~~g~~v~~i~~~~~~~-----~~~d~~ 100 (352)
..+.|++.+++|+|++.+++...+. ..+++....+|+ ....++...+......+.++... .--|+.
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t 194 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDST 194 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHH
Confidence 5689999999999999999875321 123666655555 45566665554444444322110 012678
Q ss_pred HHHhhccC---CeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 101 VLESKLTE---KSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 101 ~l~~~l~~---~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.+++.+.. ++.+||+...+...|.. .+++++..|.++|+++ ++++|.||++.+++..|..+ ...+- +...
T Consensus 195 ~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~-~vl~I~DEV~tG~gR~g~~~--a~e~~---~~~P 268 (433)
T KOG1401|consen 195 ALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDN-GVLLIFDEVQTGLGRLGYGW--AQEYF---GVTP 268 (433)
T ss_pred HHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhc-CceEEeehhhhCccccchHH--HHHHh---CcCC
Confidence 88887753 46788888778777766 4678999999999999 99999999999987766421 11110 1112
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHhhhh---ccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS---QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
-+.++.|.++ +|+++|...+++++.+.+..... ..+++.|++++.++...++.-.. .+++.++.+.-+..++.+.
T Consensus 269 DI~t~aK~L~-gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~-~e~~k~vs~~~k~L~~~l~ 346 (433)
T KOG1401|consen 269 DITTVAKPLG-GGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKD-PETLKNVSKIGKELRKLLD 346 (433)
T ss_pred cceeehhhcc-CCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHH
Confidence 3788899998 88999999999999999876544 66788999999999999886433 7889999999999999999
Q ss_pred HHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEe------ec
Q 018665 254 KSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY------AA 327 (352)
Q Consensus 254 ~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~------~~ 327 (352)
+.+.+.+....-.-..+.++...+.....+.. +.....-.+... +........+|+.+ .+
T Consensus 347 e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~-------d~~~~~~ll~~~-------~~~~~~~~gv~i~P~~~l~~~~ 412 (433)
T KOG1401|consen 347 EYLKKTPNSICGGVGRGLVIGFEFEGPVYKFA-------DAAREQGLLILT-------LGKGLLEEGVRIAPIYLLTVEH 412 (433)
T ss_pred HHhccCCCceeeeeeeEEEEEEEEeechhhhh-------hhhhhhhHHHHH-------HhcccccceEEEeccccccccC
Confidence 99988633222212334444333322111000 221111112211 11111123334433 22
Q ss_pred CHHHHHHHHHHHHHHHhhhC
Q 018665 328 SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 328 ~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.|.++++++++.+.++++.
T Consensus 413 ~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 413 TPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred cHHHHHHHHHHHHHHHHHhc
Confidence 57999999999999988764
No 344
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.76 E-value=1.3e-17 Score=140.20 Aligned_cols=310 Identities=15% Similarity=0.143 Sum_probs=222.2
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEe--CChHHHHHHHHHHh--cCCCCEEEecCCCCCChHHHHH
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVS--NGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~--~g~~~a~~~~~~~l--~~~~~~vl~~~~~~~~~~~~~~ 78 (352)
|.|-.|..++. +..+++.- .....++.+.|..+ -|||+++.....-+ .-++..|.+|+|+|..+.+.++
T Consensus 91 YlpI~Gl~eF~------k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~ 164 (427)
T KOG1411|consen 91 YLPITGLAEFN------KLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFK 164 (427)
T ss_pred hccccchHHHH------HHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCcccc
Confidence 67778888888 88888876 33323444555443 67778887655544 3457889999999999999999
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
..|..+.++.--+....++|.+.+.+.++. +...+.-.+.|||||.-...+.+++|.++.++. +.+-+.|-+|.+|
T Consensus 165 ~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGf 243 (427)
T KOG1411|consen 165 DAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGF 243 (427)
T ss_pred ccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhccc
Confidence 999999888876666677898887777754 333444466799999999999999999999999 9999999999987
Q ss_pred ccCCC--CccccccCCCCCCceEEEeccccccccccceeEEEE--c-ChhH----HHHHHhhhhccccCCChHHHHHHHH
Q 018665 156 IYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA--G-PKHF----VAACNKIQSQFTSGASSISQKAGVA 226 (352)
Q Consensus 156 ~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~--~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
....- ...+++-...+..+.++.-|++|.+|+-|-|+|.+. + +.+. -.+++...+....+|+..+...+..
T Consensus 244 aSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~ 323 (427)
T KOG1411|consen 244 ASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVAT 323 (427)
T ss_pred ccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhh
Confidence 54321 112222233334677889999999999999999874 3 3333 3344555566666788888888999
Q ss_pred HhcccCCChHHHH---HHHHHHHHHHHHHHHHhccc--C-CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 227 ALGLGYAGGEVVS---KMVKAFRERRDFLVKSFGEL--E-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 227 ~l~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~--~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
.+.+..+..+|+. ....++...|..+.+.|+.. + .|+.+..+-|+|.+-.+ +.++ .+.
T Consensus 324 Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl---------------~peQ-v~~ 387 (427)
T KOG1411|consen 324 ILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGL---------------NPEQ-VDW 387 (427)
T ss_pred ccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCC---------------CHHH-HHH
Confidence 9888544445544 34456677778888888764 2 36667788899887554 3444 467
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHh
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~ 344 (352)
|.+++-|++.--+ |||++. +...+..+.+.|.++..
T Consensus 388 l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 388 LTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred HHhhheeeeccCc--------eEeeccccccCCcccchhhHhHhc
Confidence 7888888876433 999988 66667777666665543
No 345
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.76 E-value=2.8e-16 Score=140.66 Aligned_cols=276 Identities=11% Similarity=0.085 Sum_probs=187.2
Q ss_pred cEEEeCChHHHHHHHHHHhc-CCCCEEEecCCCCC-ChH-HHHHhcCC-eEEEecccCCCCcccCHHHHHhhccCCeeEE
Q 018665 38 QILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWV-SYP-EMARIADA-TPVILPTRISENFLLDPKVLESKLTEKSRLL 113 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~-~~~~~vl~~~~~~~-~~~-~~~~~~g~-~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i 113 (352)
-++++.|+|.+++.++.+++ ++++++++.. .|. .+. .+++..|. ++..+..+ .+..+++++++. + +.+
T Consensus 60 v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~--~g~~~~~~~ve~--~---~~v 131 (374)
T TIGR01365 60 IGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAE--YGKLPDLKKVDF--K---NDV 131 (374)
T ss_pred EEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCC--CCCCCCHHHcCC--C---CCE
Confidence 46779999999999999998 4788898865 332 224 78888999 48888765 334589999873 2 225
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeE
Q 018665 114 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG 193 (352)
Q Consensus 114 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g 193 (352)
++++.-..||...| ++++... .+ ++++|+|.+.+... .+..+. +-+++++|..|.+++++ +++
T Consensus 132 ~~vhnETSTGv~np---v~~i~~~--~~-~~lliVDavSs~g~----~~l~~d------~iDv~~tgsQK~L~~pp-Gls 194 (374)
T TIGR01365 132 VFTWNGTTSGVRVP---NGDFIPA--DR-EGLTICDATSAAFA----QDLDYH------KLDVVTFSWQKVLGGEG-AHG 194 (374)
T ss_pred EEecCCCchheecc---ccccccc--cC-CCcEEEEccchhcC----CCCChh------HCcEEEEechhccCCCC-ceE
Confidence 56667678999999 6555532 26 89999999987532 122222 24488999999998554 789
Q ss_pred EEEcChhHHHHHHhhh-----------------------hccccCCChHHHHHHHHHhcccCCCh-HHHHHHHHHHHHHH
Q 018665 194 YIAGPKHFVAACNKIQ-----------------------SQFTSGASSISQKAGVAALGLGYAGG-EVVSKMVKAFRERR 249 (352)
Q Consensus 194 ~l~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 249 (352)
+++.+++.+++..... ..+..+++.....++..+++. +.. +.++++.++.+++.
T Consensus 195 ~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~--i~~egGle~~~~Rh~~~a 272 (374)
T TIGR01365 195 MLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKW--AESIGGLKPLIARADDNL 272 (374)
T ss_pred EEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHH--HHHccCHHHHHHHHHHHH
Confidence 9999998877655210 122334555555555555542 112 36899999999999
Q ss_pred HHHHHHhcccCCceecCC----CCceEEEeecCCc-cCCc--ccCCCCCCC-hHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 250 DFLVKSFGELEGVKMSEP----QGAFYLFIDFSTY-YGSE--AEGFGKIEN-SESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 250 ~~l~~~l~~~~g~~~~~~----~~g~~~~~~~~~~-~~~~--~~~~~~~~~-~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
+.+++.++++..+..... ++...+.+.+++. .... -.++ + ..++.+.|.++ ||.+.+|.....+..+
T Consensus 273 ~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~-gi~i~~G~~~~~~~~f 347 (374)
T TIGR01365 273 AVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQA----DFAKELISTLEKE-GVAYDIGSYRDAPSGL 347 (374)
T ss_pred HHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhh----HHHHHHHHHHHHC-CEEEeccccccCCCce
Confidence 999999999832666542 2333344555432 1000 0000 1 57888888876 9999988765556899
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 322 RISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 322 Ri~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
||+... +.+|++++++.|.=+.+.
T Consensus 348 RIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 348 RIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred EEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 997765 889999999998766543
No 346
>PLN02263 serine decarboxylase
Probab=99.76 E-value=1.7e-15 Score=137.74 Aligned_cols=289 Identities=11% Similarity=0.007 Sum_probs=196.0
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+.+-+++. -.|.+-....=.+|+|||+++..++.+..+ +...++++...|.++..+++..|++++.+|++ .++.+
T Consensus 136 ~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d--~~g~m 213 (470)
T PLN02263 136 VGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL--VSGEI 213 (470)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC--CCCcC
Confidence 77777777 555432121247799999999998887643 23478889999999999999999999999986 45679
Q ss_pred CHHHHHhhccCC---eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE-----EEEecccccccccCCCCccccccCC
Q 018665 98 DPKVLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL-----LVLSDEIYEHIIYAPATHTSFASLP 169 (352)
Q Consensus 98 d~~~l~~~l~~~---~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~-----~livD~~~~~~~~~~~~~~~~~~~~ 169 (352)
|++.|++++.++ +.+|+.+..+.++|.+-| +++|+++|+++ |+ ++.||.+++++...-....+ .+.
T Consensus 214 D~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~-g~~~~~iwlHVDAA~GG~~lPf~~~~~--~~d 287 (470)
T PLN02263 214 DCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEEC-GFSQDRFYIHCDGALFGLMMPFVKRAP--KVT 287 (470)
T ss_pred cHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHc-CCccCCeeEEEeccchhhHhhhccccc--ccC
Confidence 999999999643 455556667889999999 99999999999 86 99999999876431000000 011
Q ss_pred CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhc-----cccCCCh--HHHHHHHHHhcccCCChHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ-----FTSGASS--ISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
....-+-+..+.+|.++ ...++|.++.+.+.++.+.....+ .+...+. .....+...+.. .+.+.+++..
T Consensus 288 f~~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~--~G~~G~~~~i 364 (470)
T PLN02263 288 FKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR--KGYRGFQKEV 364 (470)
T ss_pred CCcCccEEEECCccccC-CCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH--hCHHHHHHHH
Confidence 11123356778899987 668899999887665544221111 1111121 122233333332 2467888889
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEE
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 322 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iR 322 (352)
++.-++.+++.+.|++. ++.....+....+.+..|. ... ..+ |..+.. .++.++
T Consensus 365 ~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~--------------~~~-----~~~-gW~L~~-----~~~~~H 418 (470)
T PLN02263 365 QKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPK--------------DEE-----FVR-RWQLAC-----QGNIAH 418 (470)
T ss_pred HHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCc--------------hHH-----hhc-ceEEcc-----CCCcEE
Confidence 99999999999999988 6665544444445554332 111 223 666654 345689
Q ss_pred EEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 323 ISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 323 i~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+.+.. +.+.++++++.|++.....
T Consensus 419 ivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 419 VVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 88876 8899999999999887744
No 347
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.75 E-value=9.7e-16 Score=148.11 Aligned_cols=303 Identities=16% Similarity=0.126 Sum_probs=191.1
Q ss_pred hhccchhhHHHHHHHHhcCCCCCCCcEEEeC-ChHHHHHHHHHHhc----C----CCCEEEecCCCCCChHHHHHhcCCe
Q 018665 13 MRVLWSFVQQFVINLKENGLSYTPDQILVSN-GAKQSILQAVLAVC----S----PGDEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 13 l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~-g~~~a~~~~~~~l~----~----~~~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
++.+++|++.+++..+ -+.+-+.+ +++.+...+++++. . ..++|+++...|......+...|++
T Consensus 542 lq~i~elq~~l~eLtG-------md~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~Gie 614 (954)
T PRK12566 542 RAMIDELEAWLCAITG-------FDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMR 614 (954)
T ss_pred HHHHHHHHHHHHHHHC-------CCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCE
Confidence 3344666688888875 33334443 55555545555532 1 2367889999997777778899999
Q ss_pred EEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 84 PVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
++.++.+. +..+|+++|+++++ +++++|++.+|++-++...+ +++|+++|+++ |+++++|.++....
T Consensus 615 Vv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~---V~eI~~iah~~-Galv~vDgA~~~a~---- 684 (954)
T PRK12566 615 VVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG---IREICEVVHQH-GGQVYMDGANLNAQ---- 684 (954)
T ss_pred EEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecch---HHHHHHHHHHc-CCEEEEEeeChhhc----
Confidence 99999974 33699999999987 67888888888877666555 99999999999 99999999986311
Q ss_pred CccccccCCCCCCceEEEeccccccc----cccceeEEEEcChhHHHHHHhhhh---------ccc---cC-CChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKIQS---------QFT---SG-ASSISQKA 223 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~g~l~~~~~~~~~~~~~~~---------~~~---~~-~~~~~~~~ 223 (352)
..+. .+.+.+-++++++.+|+|| .+|..+|.+.+.+.+...+.++.. ..+ .. .+.....+
T Consensus 685 --~~l~-~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~ 761 (954)
T PRK12566 685 --VGLA-RPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPI 761 (954)
T ss_pred --cCCC-ChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHH
Confidence 1111 1122455699999999885 234456665555544443332210 000 01 11111222
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE--EEeecCCccCCcccCCCCCCChHHHHHHH
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYL 301 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (352)
+...+.. ++.+ +.+.......+..++.++|.+..++.+..+.+.++ +.++++.... ..+ .+..+++++|
T Consensus 762 A~~Yi~~--lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~--~~g----~~~~dvakRL 832 (954)
T PRK12566 762 SWMYIAM--MGPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKA--QTG----ISEEDVAKRL 832 (954)
T ss_pred HHHHHHH--HCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEcccccc--ccC----CCHHHHHHHH
Confidence 2333322 2344 66666656778889999997643444422212211 2233332110 001 1678899999
Q ss_pred HHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 302 LDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 302 ~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
. ++||....- .|-.++++|++++. +.+|||++++.|+.+.++.
T Consensus 833 ~-d~Gihapt~-~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 833 M-DYGFHAPTM-SFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred H-HCCcEEeEE-eeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 9 458875432 23347899999988 8899999999999988875
No 348
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=2.7e-17 Score=143.07 Aligned_cols=288 Identities=16% Similarity=0.169 Sum_probs=202.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 100 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~ 100 (352)
+..|+|++ .++.+.+.-| -+.+...+.+++.++..|+...-+|.+.+..++..|+.++.+..+ |++
T Consensus 189 ~l~A~f~g------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~ 254 (519)
T KOG1357|consen 189 ELVARFLG------VEDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-------DMQ 254 (519)
T ss_pred HHHHHhcC------CcceEEEecc-ccccccCcceeecCCcceeeccccchheeccccccCceEEEEecC-------CHH
Confidence 88999986 4555555544 455666777889999999999999999999999999999988743 566
Q ss_pred HHHhhccC-------------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc--CCCCcccc
Q 018665 101 VLESKLTE-------------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY--APATHTSF 165 (352)
Q Consensus 101 ~l~~~l~~-------------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~--~~~~~~~~ 165 (352)
.||+.|++ +..+|++..-.+.-|.+.. +.++.+++++| ..+++.||+|+..+. +|....-+
T Consensus 255 ~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkky-kayl~lDEAHSiGA~g~tGrgvce~ 330 (519)
T KOG1357|consen 255 GLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKY-KAYLYLDEAHSIGAMGATGRGVCEY 330 (519)
T ss_pred HHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccc-cEEEEeeccccccccCCCCcceeec
Confidence 66666642 1223444555678888888 99999999999 999999999996443 22222223
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh--ccccCCChHHHHHHHHHhccc--CCChHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLG--YAGGEVVSKM 241 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~ 241 (352)
.... ..+.++.+++++|++|.+| |++.+++++++.++.... .+....+++........+... .......++.
T Consensus 331 ~g~d-~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k 406 (519)
T KOG1357|consen 331 FGVD-PEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQK 406 (519)
T ss_pred cCCC-chhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHH
Confidence 3322 2567799999999998677 999999999998875532 222334444443444444432 2235567788
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEe--ecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFI--DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
..++.++..+++..|++. |+.++.......+-+ ..|. ....+.++|+++ ++.+...+....
T Consensus 407 ~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~-------------k~~~f~r~~l~~-nigvVvvgfPatpl 471 (519)
T KOG1357|consen 407 IERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA-------------KIVAFSREMLER-NIGVVVVGFPATPL 471 (519)
T ss_pred HHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc-------------cccHHHHHHHhc-CceEEEEeCCCchH
Confidence 888999999999999988 888887666654332 3332 344666677766 565555444332
Q ss_pred -CCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 318 -DTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 318 -~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
....|++.+. +.|+++++++.+..+-+.
T Consensus 472 ~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 472 LESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred HHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 2567887776 889999999998877643
No 349
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.75 E-value=6.5e-16 Score=152.59 Aligned_cols=303 Identities=16% Similarity=0.143 Sum_probs=193.1
Q ss_pred cchhhHHHHHHHHhcCCCCCCCcEEEeC-ChHHHHHHHHHHh----cCCCC----EEEecCCCCCChHHHHHhcCCeEEE
Q 018665 16 LWSFVQQFVINLKENGLSYTPDQILVSN-GAKQSILQAVLAV----CSPGD----EVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 16 ~~~~~~~ia~~~~~~~~~~~~~~i~~~~-g~~~a~~~~~~~l----~~~~~----~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
+.+|.+.+++..+ . +++.+.. +++++....+.++ .++|+ +|++++..|.+....++..|++++.
T Consensus 544 i~e~q~~l~eltG-----~--d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~ 616 (954)
T PRK05367 544 IDQLEAWLAEITG-----Y--DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVV 616 (954)
T ss_pred HHHHHHHHHHHHC-----C--CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEE
Confidence 3455577777765 2 3565555 5555554444333 23443 6999999999998999999999999
Q ss_pred ecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 87 LPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.+.+ ..+|++.|++++++ ++.+|++.+|++-++...| +++|+++|+++ |+++++|.++..... +
T Consensus 617 v~~d~~--G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~-G~~v~VDgA~~~al~-~---- 685 (954)
T PRK05367 617 VACDEN--GNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEH-GGQVYLDGANMNAQV-G---- 685 (954)
T ss_pred ECCCCC--CCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHc-CCEEEEECcChhhcc-C----
Confidence 998743 46899999999964 5777888888876555578 99999999999 999999999864211 1
Q ss_pred ccccCCCCCCceEEEeccccccc----cccceeEEEEcChhHHHHHHhhhh--------ccccCCChHHH--HH--HHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKIQS--------QFTSGASSISQ--KA--GVAA 227 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~g~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~--~~~~ 227 (352)
+.. +...+-+++..|.+|+|+ .+|..+|++.+.+.+...+..... ......+...+ .+ +...
T Consensus 686 -l~~-pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~y 763 (954)
T PRK05367 686 -LAR-PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMY 763 (954)
T ss_pred -CCC-hhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHH
Confidence 111 112345599999999974 345568888887665554432210 01111122211 11 1222
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE--EEeecCCccCCcccCCCCCCChHHHHHHHHHcc
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 305 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (352)
+. .++.+.+++.....-.+..++.++|++...+.+..+.+..+ +.++++... ...+ .+..+++++|.+ +
T Consensus 764 i~--~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~--~~~g----~~~~di~krL~d-~ 834 (954)
T PRK05367 764 IR--MMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLK--ESTG----ITVDDIAKRLID-Y 834 (954)
T ss_pred HH--HHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeeccc--ccCC----CCHHHHHHHHHH-C
Confidence 22 13467777777777788899999997642333322211110 222332110 0000 167899999975 5
Q ss_pred CEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 306 QVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 306 gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
|+.....+ +-.++.++|+++. +.+|||++++.++.+..+...
T Consensus 835 G~~~~t~~-~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 835 GFHAPTMS-FPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CCeEeecC-CccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 88765422 3347889999987 889999999999888877643
No 350
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.74 E-value=2.9e-16 Score=144.36 Aligned_cols=277 Identities=11% Similarity=0.020 Sum_probs=171.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--------------------------C---CCEEEecCCCCCChHHH-HHhcCC----
Q 018665 37 DQILVSNGAKQSILQAVLAVCS--------------------------P---GDEVIIPAPFWVSYPEM-ARIADA---- 82 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~--------------------------~---~~~vl~~~~~~~~~~~~-~~~~g~---- 82 (352)
+.+++++||++|++.+++.... . ..+|+....+|++.... +...+.
T Consensus 123 ~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~ 202 (464)
T TIGR00699 123 DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH 202 (464)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 6899999999999999987521 0 12688888888876543 322221
Q ss_pred -------eEEEecccCCC-C-----------cccCHHHHHhhcc---CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHH
Q 018665 83 -------TPVILPTRISE-N-----------FLLDPKVLESKLT---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVA 139 (352)
Q Consensus 83 -------~v~~i~~~~~~-~-----------~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~ 139 (352)
.+..+|.+... . ..-+++.+++.+. +++.+|++.......|... |.+.+++|.++|+
T Consensus 203 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~ 282 (464)
T TIGR00699 203 KLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITK 282 (464)
T ss_pred ccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 11122222100 0 0013566677664 3677888877777778765 6889999999999
Q ss_pred hCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChH
Q 018665 140 KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSI 219 (352)
Q Consensus 140 ~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
++ |+++|+||++.++..+|.. .......-. ...-+.+++|.+|.+| +++..+ .+..........+++.|+.
T Consensus 283 ~~-g~lLI~DEV~tGfGrtG~~-fa~e~~gv~--~~PDi~t~gK~lg~gG----~~~~~~-~~~~~~~~~~~~T~~gnp~ 353 (464)
T TIGR00699 283 KH-NVAFIVDEVQTGVGATGKF-WAHEHWNLD--DPPDMVTFSKKFQTAG----YFFHDP-AFRPNKPYRQFNTWMGDPS 353 (464)
T ss_pred Hc-CCEEEEeeeeeCCCCCcch-hHHHhcCCC--CCCCEEEehhhhccCC----ccccch-hccCCCCcccccCCCCCHH
Confidence 99 9999999999988765532 111111110 0022567799995234 333332 2211112234557788999
Q ss_pred HHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcc----cCC-ceecC-CCCceEEEeecCCccCCcccCCCCCCC
Q 018665 220 SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEG-VKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIEN 293 (352)
Q Consensus 220 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~g-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
..+++.+.++.-. -+++.++.+++-+++.+.|++ +|. +..+. ...|.++-++++... .
T Consensus 354 ~~aaa~a~L~~l~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-----------~ 417 (464)
T TIGR00699 354 RALILREIIQEIK-----RKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-----------K 417 (464)
T ss_pred HHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-----------H
Confidence 9999988887521 123333444444444444443 432 22222 145777777775421 3
Q ss_pred hHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 294 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 294 ~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
...+.+.++++ |+.+.+. ..+.+|+.++. +++|+++++++|.+++
T Consensus 418 ~~~i~~~~~~~-Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 418 RDKLLKKARNN-GVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHHHHHHC-CcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 56788888876 8998663 24789999987 9999999999998864
No 351
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.74 E-value=2.1e-15 Score=138.31 Aligned_cols=284 Identities=17% Similarity=0.151 Sum_probs=178.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC------hHHHHHhcCCeEEEecccCCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS------YPEMARIADATPVILPTRISEN 94 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~------~~~~~~~~g~~v~~i~~~~~~~ 94 (352)
+.+|++++ .+..+++++++.|+..++.+ +.+||+|++++..|.. +...++..|++++.++...
T Consensus 129 ~~lA~l~g-------ae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~--- 197 (454)
T TIGR00474 129 GLLCELTG-------AEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN--- 197 (454)
T ss_pred HHHHHHhC-------CCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC---
Confidence 88888875 34456788888999888855 5788999999876422 2346678899999987542
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCc--c--cCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC---CCc-cccc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPT--G--SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP---ATH-TSFA 166 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~npt--G--~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~---~~~-~~~~ 166 (352)
..++++++++++++++++++++++|++ | ...| +++|+++|+++ |+++++|.+.+.+.-.+ -.. +.+.
T Consensus 198 -~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---l~~I~~la~~~-g~~vivD~~sG~l~~~~~~gl~~~p~~~ 272 (454)
T TIGR00474 198 -RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---IAELVALGREH-GLPVMEDLGSGSLVDLSRYGLPDEPTVQ 272 (454)
T ss_pred -CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---HHHHHHHHHHc-CCeEEEECCCcccccchhccCCCCcccc
Confidence 247899999999999999999999974 6 4678 99999999999 99999998644321100 001 1111
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCC---------hHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAG---------GEV 237 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~ 237 (352)
.. ...+-++++.|.+|.+|.+ ..|++++++++++.++............+..++..+.+...... .+.
T Consensus 273 ~~-~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~ 349 (454)
T TIGR00474 273 EV-IAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRM 349 (454)
T ss_pred cH-hHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHH
Confidence 11 1134569999999998523 48999999998887654322111223333333444433321100 011
Q ss_pred HHHHHHHHHHHHHHHHHHhccc--CCc--eecCCC-------------CceEEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 238 VSKMVKAFRERRDFLVKSFGEL--EGV--KMSEPQ-------------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~--~g~--~~~~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
+....++..++...+.+.|++. +++ .+.+.. .++.+.++.... ++.++.++
T Consensus 350 l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~------------~~~~l~~~ 417 (454)
T TIGR00474 350 LTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGL------------SAEKLEAR 417 (454)
T ss_pred hccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCC------------CHHHHHHH
Confidence 2222335555667777777653 343 333221 122233332221 67889888
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHH
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERI 339 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l 339 (352)
|.+. ...|... -.++.+.+.+-. .++|++.+++.|
T Consensus 418 lr~~-~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 418 LREL-PPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred HhcC-CCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 8743 4333321 246778888877 778888887765
No 352
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.73 E-value=3.8e-16 Score=143.96 Aligned_cols=279 Identities=14% Similarity=0.138 Sum_probs=160.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEec-CCCCCChHHHHH-----hcCCe--E--EEecccCCCCcccCHHHHH
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIP-APFWVSYPEMAR-----IADAT--P--VILPTRISENFLLDPKVLE 103 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~-~~~~~~~~~~~~-----~~g~~--v--~~i~~~~~~~~~~d~~~l~ 103 (352)
.+.++++++|++|++.+++... ....+|+.. ...|+++..... ..+.. + ....++ . .|++.++
T Consensus 104 ~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~---~d~~~l~ 178 (431)
T PRK06209 104 ADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR--Y---NDIASLE 178 (431)
T ss_pred cceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC--C---CCHHHHH
Confidence 3689999999999999998642 223456554 333332111100 00110 0 011111 1 2788888
Q ss_pred hhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEec
Q 018665 104 SKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 180 (352)
Q Consensus 104 ~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 180 (352)
+.++ +++.+|++.... |...|.+.+++|.++|++| |+++|+||++.++.+.+........+. .-+.+
T Consensus 179 ~~l~~~~~~~aavi~Epv~---g~~~~~~~l~~l~~lc~~~-g~lLI~DEv~tG~~~~~~g~~~~~gv~------PDi~t 248 (431)
T PRK06209 179 ALFEDHPGRIACVILEPAT---ADEPQDGFLHEVRRLCHEN-GALFILDEMITGFRWHMRGAQKLYGIV------PDLSC 248 (431)
T ss_pred HHHHhCCCCEEEEEEcccc---CCCCCHHHHHHHHHHHHHc-CCEEEEEcccccCCcCcchhhHHhCCC------cceee
Confidence 8874 345666665443 3367788999999999999 999999999987643221111111111 22577
Q ss_pred cccccccccceeEEEEcChhHHHH--HHhh------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 181 FSKAFAMTGWRLGYIAGPKHFVAA--CNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 181 ~sK~~g~~g~~~g~l~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
++|.+| +|+++|++++++++++. +... ...+++++|+...+++.++++.... ++..+++.+..+..++.+
T Consensus 249 ~gK~lg-gG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~-~~~~~~~~~~g~~l~~~L 326 (431)
T PRK06209 249 FGKALG-NGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD-EDVIERLHEQGAKLAAGV 326 (431)
T ss_pred ehhhhc-CCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHH
Confidence 899998 78999999999998876 3111 1234566788888888888876321 233344444444444444
Q ss_pred HHHhcccCCcee-cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeecCHHH
Q 018665 253 VKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTT 331 (352)
Q Consensus 253 ~~~l~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~~~~~ 331 (352)
.+...++ ++.. +...+.......+..... ... . ......+.+.+.++ |+.+.| ++++..++++|
T Consensus 327 ~~~~~~~-~~~~~vr~~G~~~~~~~~~~~~~-~~~-~--~~~~~~~~~~l~~~-Gi~~p~---------l~is~~ht~~d 391 (431)
T PRK06209 327 NEAAAEH-GLQDHVRVSGRPCCLTYSTLDGN-GQP-S--QAFRTLFLQETIRR-GVLMPS---------LVVSYAHGDAD 391 (431)
T ss_pred HHHHHhC-CCCeEEEeecceEEEEEecCCcc-cCC-c--HHHHHHHHHHHHHC-Cccccc---------ccccccCCHHH
Confidence 4433334 3222 222222221111110000 000 0 00123567777765 887622 57776679999
Q ss_pred HHHHHHHHHHHHhhh
Q 018665 332 LQAAVERIKKGLLTL 346 (352)
Q Consensus 332 l~~~~~~l~~~~~~~ 346 (352)
|++++++|.++++++
T Consensus 392 Id~~l~~l~~~l~~~ 406 (431)
T PRK06209 392 IERTIDAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999876
No 353
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.73 E-value=4.3e-15 Score=144.48 Aligned_cols=218 Identities=12% Similarity=0.138 Sum_probs=147.6
Q ss_pred CeeEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccc
Q 018665 109 KSRLLILCSP-SNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 186 (352)
Q Consensus 109 ~~~~i~i~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 186 (352)
++.++++... +...|..+ |++.++++.++|++| |+++|.||++.+|+..|... ...... ...-+.+++|.++
T Consensus 584 ~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~-gilLI~DEV~TGfGRtG~~f-a~e~~g----v~PDIi~~gKgLt 657 (817)
T PLN02974 584 HIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSR-KIPVIFDEVFTGLWRLGVES-AWELLG----CKPDIACYAKLLT 657 (817)
T ss_pred CEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeecccCCCcccchh-hHHhcC----CCCCEEeeccccc
Confidence 5677777664 67778765 677999999999999 99999999999998877522 222222 2233667889998
Q ss_pred ccc-ceeEEEEcChhHHHHHHh------hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHh---
Q 018665 187 MTG-WRLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF--- 256 (352)
Q Consensus 187 ~~g-~~~g~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l--- 256 (352)
+| +++|.+++++++.+.+.. ..+..+++.|+++.+++.+.|+.-.. .+..+++.+..++..+++.+.|
T Consensus 658 -gG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~-~~~~~~l~~~~~~l~~~l~~~l~~~ 735 (817)
T PLN02974 658 -GGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKD-PSTNPNLIPPGSRLRELWDEELVRA 735 (817)
T ss_pred -CCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88 699999999999998752 12456788999999999999886321 2333444555555544444444
Q ss_pred -cccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHH
Q 018665 257 -GELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQ 333 (352)
Q Consensus 257 -~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~ 333 (352)
.++|.+.-+. .-|.++.+++.+.... +++ ....+..+.+.++.+.|+.+++. .+.+|+.++. ++++++
T Consensus 736 l~~~p~V~~VR-g~Gl~~~iel~~~~~~--~~~-~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~ 806 (817)
T PLN02974 736 ISSLPNVERVV-SLGTVLALELDAEGSG--SGY-SSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCT 806 (817)
T ss_pred HhhCCCeeEEE-eeeeEEEEEEecCCcc--ccc-chHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHH
Confidence 4444444443 3456677777432110 111 00124567777772349999873 3688886665 899999
Q ss_pred HHHHHHHHHH
Q 018665 334 AAVERIKKGL 343 (352)
Q Consensus 334 ~~~~~l~~~~ 343 (352)
++++.|.+.+
T Consensus 807 ~~~~~l~~~~ 816 (817)
T PLN02974 807 RLLRKVYRRL 816 (817)
T ss_pred HHHHHHHHHh
Confidence 9999998876
No 354
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.73 E-value=1.5e-15 Score=150.01 Aligned_cols=283 Identities=14% Similarity=0.096 Sum_probs=195.9
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCC--CCEEEecCCCCCChHHHH----HhcC
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSP--GDEVIIPAPFWVSYPEMA----RIAD 81 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~--~~~vl~~~~~~~~~~~~~----~~~g 81 (352)
....|+.++.|.+.++++.+ ++..++.+..++|++.+.++.++ .++ +++|++++..|+.+...+ +..|
T Consensus 116 sQG~Leal~~~Qt~la~LtG-----~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G 190 (954)
T PRK05367 116 SQGRLEALLNFQTMVADLTG-----LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLG 190 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHC-----CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCC
Confidence 44467778889999999998 88999999999999999888776 233 389999999999888654 5689
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
++++.++.+. + .+ .+++..+++.+| |-+|.+.| +++|+++|+++ |+++++|..+..+..
T Consensus 191 ~ev~~~~~~~--d--~~--------~~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~-Gal~~vda~~~Al~~---- 249 (954)
T PRK05367 191 IEVVVGDAAK--A--LD--------HDDVFGVLLQYP-GTSGEVRD---YTALIAAAHAR-GALVAVAADLLALTL---- 249 (954)
T ss_pred CEEEEecCcc--C--CC--------cccEEEEEEecC-CCCeeecc---HHHHHHHHHHc-CCEEEEEehhhhccC----
Confidence 9999998753 1 11 234555555454 56899998 99999999999 999999975532211
Q ss_pred ccccccCCCCCCceEEEecccccc---ccccceeEEEEcChhHHHHHHhhhh------------------------cccc
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAF---AMTGWRLGYIAGPKHFVAACNKIQS------------------------QFTS 214 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~---g~~g~~~g~l~~~~~~~~~~~~~~~------------------------~~~~ 214 (352)
..+ +.+.+-+++++|.+|+. |.+|...|++.+++++.+.+..... ....
T Consensus 250 l~~----pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRreka 325 (954)
T PRK05367 250 LTP----PGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKA 325 (954)
T ss_pred CCC----hhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccccccc
Confidence 112 23345669999999982 2345569999999988777531100 0001
Q ss_pred CCChH---HHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCC
Q 018665 215 GASSI---SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 291 (352)
Q Consensus 215 ~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 291 (352)
+.|.- ...++.+.+-........++++.++...+..++.+.|+.. |+++..+...-.+.++++.
T Consensus 326 TsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~~f~~~~~~~~~------------ 392 (954)
T PRK05367 326 TSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDSFFDTLTVEVGG------------ 392 (954)
T ss_pred ccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCCCCeEEEeCCC------------
Confidence 11211 1222222211111136778888999999999999999874 8777543211123344431
Q ss_pred CChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHH
Q 018665 292 ENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 340 (352)
Q Consensus 292 ~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~ 340 (352)
++.++.++|.++ ||.+..- .++.+|+|++. +++||+++++.|+
T Consensus 393 -~~~~i~~~l~~~-gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 393 -DAAAVLARALAA-GINLRRV----DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -CHHHHHHHHHHC-Cceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 688999999876 8887321 26789999998 8899999999997
No 355
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.73 E-value=2.1e-15 Score=139.00 Aligned_cols=280 Identities=12% Similarity=0.126 Sum_probs=168.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC--------------CCCEEEecCCCCCChHH-HHHhcCCe-EE----------Eecc
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS--------------PGDEVIIPAPFWVSYPE-MARIADAT-PV----------ILPT 89 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~--------------~~~~vl~~~~~~~~~~~-~~~~~g~~-v~----------~i~~ 89 (352)
-+.+++++||++|++.+++.... .+.+|+....+|++... ++...|.. .. .++.
T Consensus 103 ~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 182 (431)
T TIGR03251 103 LPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 182 (431)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCC
Confidence 36899999999999999987521 03578888888877653 33222211 00 0111
Q ss_pred cC-----C-CCc-------ccCHHHHHhhc---cCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 90 RI-----S-ENF-------LLDPKVLESKL---TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 90 ~~-----~-~~~-------~~d~~~l~~~l---~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
+. . ... ..+++++++.+ .+++.++++...+...|.. .|++.+++|.++|+++ |+++|+||++
T Consensus 183 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~ 261 (431)
T TIGR03251 183 PKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEH-DALLIFDEVQ 261 (431)
T ss_pred CcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecch
Confidence 10 0 000 01244455555 3578888888777777865 5778999999999999 9999999999
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcCh--hHHHHH-H-hhhhccccCCChHHHHHHHHHh
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVAAC-N-KIQSQFTSGASSISQKAGVAAL 228 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~--~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~l 228 (352)
.++..+|.. .......-.+| +.+++|.+ +. .|++...+ ++.+.. . ......+++.|+...+++.+++
T Consensus 262 tG~GrtG~~-~a~~~~gv~PD----i~~~gK~~--~~--~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 332 (431)
T TIGR03251 262 TGVGLTGTA-WAYQQLGVQPD----IVAFGKKT--QV--CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRIL 332 (431)
T ss_pred hccCccchH-HHHHhcCCCCC----EEEecccC--cc--ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHH
Confidence 988776532 11111211112 33578876 21 25554432 122211 1 1123455678999999999988
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 229 GLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
+.-.. ....+++.+..++.++.+.+..++.+++.......|.++.++++... ....+.+.|.++ ||.
T Consensus 333 ~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~~-Gvl 399 (431)
T TIGR03251 333 EIIEE-ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-----------DRDEVIRQLYRE-GVL 399 (431)
T ss_pred HHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-----------HHHHHHHHHHhC-CeE
Confidence 75211 12234444444444445544334444232222234666777776421 355788888865 999
Q ss_pred eccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 309 LVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 309 i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
+.+.+ .+.+|++++. +++|+++++++|.++
T Consensus 400 ~~~~g----~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 400 LLGCG----ERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred EecCC----CCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 97742 3678988876 899999999998763
No 356
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.72 E-value=4.8e-15 Score=140.64 Aligned_cols=308 Identities=11% Similarity=0.087 Sum_probs=187.6
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i 87 (352)
.-..+.+ +.+|+.++ .....++++|+|.++..++.+++.+||.||++..||.+..+++...|..++++
T Consensus 195 G~i~eAe------~~AA~~fg------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl 262 (714)
T PRK15400 195 GPHKEAE------EYIARVFN------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred hHHHHHH------HHHHHHhC------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 3345666 88888886 66788999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc----ccC-----HHHHHhhccCC-----eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 88 PTRISENF----LLD-----PKVLESKLTEK-----SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 88 ~~~~~~~~----~~d-----~~~l~~~l~~~-----~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
+... ..+ .++ .+.+++++++. +..+++.+|++ .|.+++ ++.|.++|+.+ + |++||||+
T Consensus 263 ~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~-~--ilvDEAwg 334 (714)
T PRK15400 263 RPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVK-S--IHFDSAWV 334 (714)
T ss_pred cccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCC-C--EEEEccch
Confidence 7653 222 234 78999988642 23688888854 799999 88889999888 7 68999998
Q ss_pred ccc-cCCCC-ccccccCCC-CCCceEEEeccccccccccce-eEEEEcChhH-HHHHHhh-hhccccCCChHHHHHHHHH
Q 018665 154 HII-YAPAT-HTSFASLPG-MWERTLTVNGFSKAFAMTGWR-LGYIAGPKHF-VAACNKI-QSQFTSGASSISQKAGVAA 227 (352)
Q Consensus 154 ~~~-~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 227 (352)
... |.+.- +.+...... ..+.++++.|.||.+ +++. .+++-.+..+ .+++... ....+.+|+.+..+.+-.+
T Consensus 335 ah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a 412 (714)
T PRK15400 335 PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETA 412 (714)
T ss_pred hhhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 642 22211 011111111 113458999999998 4443 3333222211 1223222 2233445555555444443
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCC------ceecCCCC----------------c-------------eE
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG------VKMSEPQG----------------A-------------FY 272 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g------~~~~~~~~----------------g-------------~~ 272 (352)
... +..+.-+++.+...+....+++.+.++++ +.+..+.. | .-
T Consensus 413 ~~~--m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~K 490 (714)
T PRK15400 413 AAM--MKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIK 490 (714)
T ss_pred HHH--HHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCce
Confidence 332 10123344555555566666666665544 44432220 0 01
Q ss_pred EEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEE--EeecCHHHHHHHHHHHHHHHhh
Q 018665 273 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI--SYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi--~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+.+.+|+. +..-+-......+..+.+.|.+ +||.+.-.. ...+-+ +++.++++++++++.|.++-+.
T Consensus 491 lti~tpgi-~~~g~~~~~Gipg~~v~~~L~e-~gI~~E~~d----~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~ 559 (714)
T PRK15400 491 VTLLTPGM-KKDGTMSDFGIPASIVAKYLDE-HGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (714)
T ss_pred EEEEeCCC-CCCccccccCCCHHHHHHHHHH-cCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 22333321 0000000011257788888865 588875532 444444 4444889999999999887554
No 357
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.71 E-value=7.6e-15 Score=137.00 Aligned_cols=315 Identities=12% Similarity=0.102 Sum_probs=195.5
Q ss_pred CCCCCChhhhccchhhHHHHHHHH-hcC-CC----------CCCCcEEEeCChHHHHHHHHHHhcC--------------
Q 018665 5 RVSQGTLQMRVLWSFVQQFVINLK-ENG-LS----------YTPDQILVSNGAKQSILQAVLAVCS-------------- 58 (352)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~ia~~~~-~~~-~~----------~~~~~i~~~~g~~~a~~~~~~~l~~-------------- 58 (352)
...+...+++ +.+.+++. ..+ .+ .+...=.+++|+|+|+..++.+...
T Consensus 122 ~~spa~t~lE------~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~ 195 (522)
T TIGR03799 122 ETSKAFTPLE------RQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAR 195 (522)
T ss_pred ecCcchHHHH------HHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccccccccc
Confidence 3455666777 77777776 221 10 1122346789999999888776321
Q ss_pred ------------CCCEEEecCCCCCChHHHHHhcCC---eEEEecccCCCCcccCHHHHHhhcc----CCeeEEEEc--C
Q 018665 59 ------------PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLT----EKSRLLILC--S 117 (352)
Q Consensus 59 ------------~~~~vl~~~~~~~~~~~~~~~~g~---~v~~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~--~ 117 (352)
++..|+++.-.|.++..+++..|. +++.+|++ .++.+|++.|+++++ ++++.++++ .
T Consensus 196 ~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 196 EGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred ccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 123688888999999999999998 78999987 445799999999885 344444443 4
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc-ccccCCCCCCceEEEeccccccccccceeEEEE
Q 018665 118 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 196 (352)
Q Consensus 118 p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~ 196 (352)
.++.+|.+.| +++|+++|+++ |+++++|.++++......... .+..+ ..-+.++.|.+|+++ ...++|.++
T Consensus 274 Gtt~tGaiDp---l~eIa~i~~~~-g~~lHVDaA~gg~~~~~~~~r~~l~gl---e~aDSit~d~HK~l~-~P~g~G~ll 345 (522)
T TIGR03799 274 GTTETGNIDP---LDEMADIAQEL-GCHFHVDAAWGGATLLSNTYRHLLKGI---ERADSVTIDAHKQLY-VPMGAGMVL 345 (522)
T ss_pred cCcCCCCcCC---HHHHHHHHHHc-CCeEEEEchhhhHHHhCHHHHHHhcCc---hhCCEEEEChhhcCC-cCcccEEEE
Confidence 4679999999 99999999999 999999999986432110000 01211 123478999999876 556789887
Q ss_pred cC-hhHHHHHHhhhhc-----------cc--cCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 018665 197 GP-KHFVAACNKIQSQ-----------FT--SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 262 (352)
Q Consensus 197 ~~-~~~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 262 (352)
.+ +...+.+.....+ ++ .+.+..+ ..+..+++. .....++++.++..++.+++.+.|++.|++
T Consensus 346 vr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~--lG~~G~~~ii~~~~~la~~l~~~L~~~~~~ 422 (522)
T TIGR03799 346 FKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHI--IGRKGYELLIDQSIEKAKYFADLIQQQPDF 422 (522)
T ss_pred EeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 75 4554544321000 11 1222222 123333332 235778999999999999999999999999
Q ss_pred eecCCCCceEEEeec-CCccCCcc-----cCCCC-----CCChHHHHHHHHHccCEEeccCCC----CCC--CCeEEEEe
Q 018665 263 KMSEPQGAFYLFIDF-STYYGSEA-----EGFGK-----IENSESLCRYLLDKAQVALVPGDA----FGD--DTCIRISY 325 (352)
Q Consensus 263 ~~~~~~~g~~~~~~~-~~~~~~~~-----~~~~~-----~~~~~~~~~~l~~~~gi~i~~g~~----~~~--~~~iRi~~ 325 (352)
+++.+..-..+.+++ |....... +.... ..-...+.+++.+++...+..... +.. .-.+|+++
T Consensus 423 el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~ 502 (522)
T TIGR03799 423 ELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVL 502 (522)
T ss_pred EEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEe
Confidence 988654333344443 32211000 00000 001235666666664444442211 111 13699998
Q ss_pred ec---CHHHHHHHHHH
Q 018665 326 AA---SLTTLQAAVER 338 (352)
Q Consensus 326 ~~---~~~~l~~~~~~ 338 (352)
.. ++++++.+++.
T Consensus 503 ~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 503 ANPLTTHEILQDILDE 518 (522)
T ss_pred cCCCCCHHHHHHHHHH
Confidence 76 77888887754
No 358
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.71 E-value=1.8e-14 Score=140.33 Aligned_cols=304 Identities=14% Similarity=0.104 Sum_probs=195.2
Q ss_pred hhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChHHHHHhcCCeE
Q 018665 13 MRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYPEMARIADATP 84 (352)
Q Consensus 13 l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~~~~~~~g~~v 84 (352)
++.+++|.+.+++..| .+. --+..++++.+....+.++. .+.+.|+++...|...-..++..|+++
T Consensus 529 lq~i~elq~~l~eltG-----md~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~V 602 (939)
T TIGR00461 529 QELIAQLEKWLCSITG-----FDA-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQV 602 (939)
T ss_pred HHHHHHHHHHHHHHHC-----CCC-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEE
Confidence 3444666688888876 442 22333445554444444332 123579999999988888899999999
Q ss_pred EEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 85 VILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 85 ~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+.++.+ .++.+|+++|+++++ +++++|++.+|+| +|...+. +++|+++|+++ |..+++|.++....
T Consensus 603 v~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~--I~eI~~iah~~-G~~v~VDgAq~~al----- 671 (939)
T TIGR00461 603 VPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT--IQHACDIVHSF-GGQVYLDGANMNAQ----- 671 (939)
T ss_pred EEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc--HHHHHHHHHHc-CCEEEEEecChhhC-----
Confidence 999986 344699999999997 4889999999998 6666332 99999999999 99999999986411
Q ss_pred ccccccCCCCCCceEEEeccccccc----cccceeEEEEcChhHHHHHHhhh----------h-----ccccCCCh-HHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKIQ----------S-----QFTSGASS-ISQ 221 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~g~l~~~~~~~~~~~~~~----------~-----~~~~~~~~-~~~ 221 (352)
..+. .+.+.+-+++.+|.+|.|+ .+|..+|++.+.+++...+.... . ..+...+. ...
T Consensus 672 -~~l~-~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~ 749 (939)
T TIGR00461 672 -VGLT-SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASIL 749 (939)
T ss_pred -CCCC-CccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHH
Confidence 0111 1123456699999999774 45677899998877665543110 0 00101111 111
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC-Cce-E--EEeecCCccCCcccCCCCCCChHHH
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAF-Y--LFIDFSTYYGSEAEGFGKIENSESL 297 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~g~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
..+...+.. ++.+.+.+..+..-.+..++.++|++ +.++..+. .+. + +.++++.. .+..| .+..++
T Consensus 750 l~a~~yi~~--lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~--~~~~g----~~~~dI 819 (939)
T TIGR00461 750 PISWMYIKM--MGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPL--KAKTG----IEAIDV 819 (939)
T ss_pred HHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccch--hhhcC----CCHHHH
Confidence 222222222 34788888888888899999999986 44544332 222 2 33455421 01111 178999
Q ss_pred HHHHHHccCEEeccCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHhhhC
Q 018665 298 CRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 298 ~~~l~~~~gi~i~~g~~~~~~~~iRi~~~--~~~~~l~~~~~~l~~~~~~~~ 347 (352)
+++|.+. |+.-..-+ |-..+.+=|.++ .+.+|||++++.+.++.++..
T Consensus 820 akrL~d~-G~hapt~~-~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 820 AKRLQDY-GFHAPTLS-FPVPGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred HHHHHhC-CeeccccC-CccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999976 87643322 223344444444 488999999999988776654
No 359
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.70 E-value=4e-15 Score=146.46 Aligned_cols=282 Identities=9% Similarity=0.076 Sum_probs=190.6
Q ss_pred hhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cC--CCCEEEecCCCCCChHHHHH----hcCCe
Q 018665 11 LQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CS--PGDEVIIPAPFWVSYPEMAR----IADAT 83 (352)
Q Consensus 11 ~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~--~~~~vl~~~~~~~~~~~~~~----~~g~~ 83 (352)
..+..+++|.+.+|++++ ++.+++.++.++|++.+.+++++ .+ ++++|++++..|+.+...++ ..|++
T Consensus 145 G~lqal~~~Qt~ia~LtG-----~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~Gie 219 (993)
T PLN02414 145 GRLESLLNYQTMITDLTG-----LPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLE 219 (993)
T ss_pred HHHHHHHHHHHHHHHHhC-----CChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCE
Confidence 356677888899999998 88999999999999999888776 33 34789999999999876654 56999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.++.+.. + ...+....++ .+..|.+|.+.| +++|+++|+++ |+++++ .++.. ....- .
T Consensus 220 V~~v~~~~~-----~------~~~~~v~~vl-vq~P~~~G~v~d---v~~I~~~ah~~-GaL~iV-aad~l-al~~l--~ 279 (993)
T PLN02414 220 VVVADEKDF-----D------YSSGDVCGVL-VQYPATDGEVLD---YAEFVKNAHAN-GVKVVM-ATDLL-ALTML--K 279 (993)
T ss_pred EEEecchhh-----c------cccCceEEEE-EecCCCCeEEcC---HHHHHHHHHHc-CCEEEE-EECHH-HhcCC--C
Confidence 999987421 1 1122344444 333345899999 99999999999 999999 44432 11111 1
Q ss_pred ccccCCCCCCceEEEecccccc---ccccceeEEEEcChhHHHHHHh-hhh-----------------------ccccCC
Q 018665 164 SFASLPGMWERTLTVNGFSKAF---AMTGWRLGYIAGPKHFVAACNK-IQS-----------------------QFTSGA 216 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~---g~~g~~~g~l~~~~~~~~~~~~-~~~-----------------------~~~~~~ 216 (352)
+. ...+-++++++.+|+. |.+|.+.|++.+++++.+.+.. +.. ....+.
T Consensus 280 ~p----ge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTs 355 (993)
T PLN02414 280 PP----GEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATS 355 (993)
T ss_pred CH----hhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhccccc
Confidence 22 2245569999999996 3345569999999887665431 000 001233
Q ss_pred ChHHHHHHHHHhc---ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCC
Q 018665 217 SSISQKAGVAALG---LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 293 (352)
Q Consensus 217 ~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
|.-...++.+.+. ........++++.+++.++..++.+.|+.. |+++..+.-.-.+.++++ +
T Consensus 356 Nict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~f~~vt~~~~--------------~ 420 (993)
T PLN02414 356 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPFFDTVKVKCS--------------D 420 (993)
T ss_pred chhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCCcCeEEEecC--------------C
Confidence 3322222333222 111134668888899999999999999875 777754321112334443 4
Q ss_pred hHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHH
Q 018665 294 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 341 (352)
Q Consensus 294 ~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~ 341 (352)
..++.++|.++ ||.+..- .++.+|+|++. +++||+++++.|+.
T Consensus 421 ~~~v~~~L~~~-gI~l~~~----~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 421 ADAIADAAAKV-GINLRVV----DANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred HHHHHHHHHHC-CCeeEEe----cCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 57899999876 8866432 25679999998 88999999999963
No 360
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.69 E-value=1.3e-14 Score=129.26 Aligned_cols=313 Identities=14% Similarity=0.109 Sum_probs=209.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC-CCCEEEecC-------CCCCC-h
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS-PGDEVIIPA-------PFWVS-Y 73 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~~~~vl~~~-------~~~~~-~ 73 (352)
-|+.++.+.+|+ +.+++.++ .+.+++|.+++.+...++..+++ +|+.+.+.. ..|+. .
T Consensus 69 ~Y~gdpSv~~Le------e~vael~G-------~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett 135 (467)
T TIGR02617 69 AYSGSRSYYALA------ESVKNIFG-------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTT 135 (467)
T ss_pred ccccCchHHHHH------HHHHHHhC-------CceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecc
Confidence 488888888999 99999985 66789999999999999999988 566665433 33333 3
Q ss_pred HHHHHhcCCeEEEeccc--------CCCCcccCHHHHHhhccC----CeeEEEEcCCCC-CcccCCCHHHHHHHHHHHHh
Q 018665 74 PEMARIADATPVILPTR--------ISENFLLDPKVLESKLTE----KSRLLILCSPSN-PTGSVYPKNLLDEIARIVAK 140 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~~~--------~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~n-ptG~~~~~~~l~~l~~~~~~ 140 (352)
...+...|..++.++.+ ......+|+++|++.+++ ++..+...-.+| -.|+++|.+.++++.++|++
T Consensus 136 ~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~ 215 (467)
T TIGR02617 136 QGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKK 215 (467)
T ss_pred hHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHH
Confidence 46778889888776432 122345899999999973 333332222233 46899999999999999999
Q ss_pred CCCEEEEeccccccc-cc------CCCCccccccCCC--CCCceEEEeccccccccccceeEEEEcChh----HHHHHHh
Q 018665 141 HPRLLVLSDEIYEHI-IY------APATHTSFASLPG--MWERTLTVNGFSKAFAMTGWRLGYIAGPKH----FVAACNK 207 (352)
Q Consensus 141 ~~~~~livD~~~~~~-~~------~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~----~~~~~~~ 207 (352)
| |+.++.|.+...- .+ .+....+...+.. ...-+.+..|++|.+|.+- .|+++++++ +.++.+.
T Consensus 216 ~-GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApv--Gg~Lag~d~~~~~l~~~~~~ 292 (467)
T TIGR02617 216 Y-DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPM--GGLLCFKDDSFFDVYTECRT 292 (467)
T ss_pred c-CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcc--cceEEecchhHHHHHHHHHh
Confidence 9 9999999986531 21 0112233332210 0122377889999987441 155566544 3333332
Q ss_pred hh-----hccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeec----C
Q 018665 208 IQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF----S 278 (352)
Q Consensus 208 ~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~----~ 278 (352)
.. -.+..+.+.-.+.+++..|.... ..+++.....+++ +|.+.|.+. |+.++. .+|.-++++- |
T Consensus 293 ~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~-~~~yl~~ri~qv~----yl~~~L~~~-Gvpi~~-~Gghav~iDa~~~lp 365 (467)
T TIGR02617 293 LCVVQEGFPTYGGLEGGAMERLAVGLYDGM-NLDWLAYRINQVQ----YLVNGLEEI-GVVCQQ-AGGHAAFVDAGKLLP 365 (467)
T ss_pred hcccccCCcCcCchhHHHHHHHHhhhhhcc-cHHHHHHHHHHHH----HHHHHHHhC-CCcEEe-cCccEEEEehhhhCC
Confidence 21 12235788888888887787653 3666666665544 777777776 998888 8888888863 4
Q ss_pred CccCCcccCCCCCCChHHHHHHHHHccCEEe-ccCCCC-C-C----------CCeEEEEeec---CHHHHHHHHHHHHHH
Q 018665 279 TYYGSEAEGFGKIENSESLCRYLLDKAQVAL-VPGDAF-G-D----------DTCIRISYAA---SLTTLQAAVERIKKG 342 (352)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i-~~g~~~-~-~----------~~~iRi~~~~---~~~~l~~~~~~l~~~ 342 (352)
......+ .+..++.+|....||-- .-|+.. + . -..+|+.++. |.+.++...+.+..+
T Consensus 366 hip~~~f-------pa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~ 438 (467)
T TIGR02617 366 HIPADQF-------PAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHV 438 (467)
T ss_pred CCChhhC-------cHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHH
Confidence 3332222 67889999998888742 222221 1 0 1479999987 889999999999888
Q ss_pred Hhh
Q 018665 343 LLT 345 (352)
Q Consensus 343 ~~~ 345 (352)
.+.
T Consensus 439 ~~~ 441 (467)
T TIGR02617 439 KEN 441 (467)
T ss_pred Hhh
Confidence 765
No 361
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.69 E-value=5e-15 Score=135.76 Aligned_cols=255 Identities=15% Similarity=0.111 Sum_probs=182.4
Q ss_pred CCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC-----C---------CCEEEecCCCCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS-----P---------GDEVIIPAPFWV 71 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-----~---------~~~vl~~~~~~~ 71 (352)
.++..++. +....+++ -.+.+ ....=.+|+|+|+++..++.+... . ..+|+++...|.
T Consensus 96 ~p~a~~~E------~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~ 168 (460)
T COG0076 96 SPAAAELE------ERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHF 168 (460)
T ss_pred ChhHHHHH------HHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchh
Confidence 34455566 78888887 55544 445568899999999988776421 0 127999999999
Q ss_pred ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeE--EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 72 SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL--LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 72 ~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~--i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
++..++..+|++...+++... ++.+|++.+++++++++.. |+-+..+.++|.+-| +++|+++|+++ +++++||
T Consensus 169 s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i~~ia~ia~~~-~i~lHVD 243 (460)
T COG0076 169 SFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---IEELADIAEEY-GIWLHVD 243 (460)
T ss_pred HHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---HHHHHHHHHHc-CCcEEEE
Confidence 999999999999999999864 7789999999999887776 787888999999999 99999999999 9999999
Q ss_pred cccccccc--CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhhhhcc---------cc--C
Q 018665 150 EIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQF---------TS--G 215 (352)
Q Consensus 150 ~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~~~~~---------~~--~ 215 (352)
.|++++.. ..........+ ...+-++.++||... ...++|+++.+.+ ...+......++ +. +
T Consensus 244 AA~GG~~~pf~~~~~~~~f~l---~~vdSIt~d~HK~g~-aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~s 319 (460)
T COG0076 244 AAFGGFLLPFLEPDGRWDFGL---EGVDSITVDGHKYGL-APIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGS 319 (460)
T ss_pred ccccceeecccCccchhhcCC---CCceEEEECcccccC-CCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeec
Confidence 99997643 11111111222 123366788999974 7788999987654 444433221111 11 1
Q ss_pred CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCC
Q 018665 216 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 279 (352)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~ 279 (352)
-+.....++...+.. ++.+.++++.++.-++.+++.+.|++.+.+++..+.....+.++.++
T Consensus 320 r~~~~~~~~~~~l~~--lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 320 RPGRQALALYANLRR--LGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred cchHHHHHHHHHHHH--hCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 122122222222222 24688899999999999999999999866888876666667778755
No 362
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.68 E-value=4.3e-14 Score=134.23 Aligned_cols=308 Identities=12% Similarity=0.092 Sum_probs=182.5
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i 87 (352)
.-..+.+ +.+|+.++ .....++++|+|.++..++.+++.+||.||++..||.+..+++...|..++++
T Consensus 195 G~i~eAe------~~aA~~fg------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl 262 (713)
T PRK15399 195 GPHLEAE------EYIARTFG------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWL 262 (713)
T ss_pred hHHHHHH------HHHHHHhC------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEe
Confidence 3345666 88888886 66788999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc----ccCH-----HHHHhhccC-----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 88 PTRISENF----LLDP-----KVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 88 ~~~~~~~~----~~d~-----~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
+... ..+ .+++ +.+++++++ +++++++.+|++ .|.+.+ ++.|.+.|. . -+|++||||+
T Consensus 263 ~P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~g-~--~~ilvDEAhg 334 (713)
T PRK15399 263 KPTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTLD-V--PSIHFDSAWV 334 (713)
T ss_pred cccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHhC-C--CEEEEeccch
Confidence 7543 222 2444 888888863 336788888854 799999 777777661 2 2456999998
Q ss_pred ccc-cCCC-CccccccCC-CCCCceEEEeccccccccccce-eEEEEcChhH-HHHHHhh-hhccccCCChHHHHHHHHH
Q 018665 154 HII-YAPA-THTSFASLP-GMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHF-VAACNKI-QSQFTSGASSISQKAGVAA 227 (352)
Q Consensus 154 ~~~-~~~~-~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 227 (352)
... |.+. .+.+..... .....++++.|.||.+ +++. .+++-.+..+ .+++... ....+.+|+.+..+.+-.+
T Consensus 335 ah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a 412 (713)
T PRK15399 335 PYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETA 412 (713)
T ss_pred hhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 632 2111 111111111 1112335599999998 4443 4555443322 1233322 2233445555554444443
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCC------ceecCCC-----------------------------CceE
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG------VKMSEPQ-----------------------------GAFY 272 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g------~~~~~~~-----------------------------~g~~ 272 (352)
... +....-+++.+...+....+++.+.++.+ +++..++ .-.-
T Consensus 413 ~~~--m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~K 490 (713)
T PRK15399 413 AAM--LRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVK 490 (713)
T ss_pred HHH--HHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCce
Confidence 332 10112344444455555555555554322 2333211 0011
Q ss_pred EEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEE--EeecCHHHHHHHHHHHHHHHhh
Q 018665 273 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI--SYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi--~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+.+.+|+.. .....-.....+..+.+.|.+ +||.+.-.. ...+-+ +++.++++++++++.|.++-+.
T Consensus 491 ltI~t~g~~-~~g~~~~~Gi~g~~l~~~L~e-~gI~~E~~d----~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~ 559 (713)
T PRK15399 491 VTILTPGMD-EQGNMSEEGIPAALVAKFLDE-RGIVVEKTG----PYNLLFLFSIGIDKTKAMGLLRGLTEFKRA 559 (713)
T ss_pred EEEEecCcc-cccccccCCCCHHHHHHHHHH-cCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 223333210 000000112267788888865 488876542 344444 4444889999999999887554
No 363
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=4.4e-15 Score=127.22 Aligned_cols=308 Identities=20% Similarity=0.238 Sum_probs=210.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
||++-.-+.++. +.||+++| ..+.|+...|- .++..++.+++++||-|.+.....+.....++....
T Consensus 134 FYGt~DvHldlE------~~iakF~G------~E~aivYs~gF-~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS 200 (467)
T KOG1358|consen 134 FYGTIDVHLDLE------KRIAKFMG------TEDAIVYSYGF-STIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRS 200 (467)
T ss_pred ccccceeecccH------HHHHHhhC------Ccceeeecccc-chhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhh
Confidence 577777778888 99999997 56677776665 557779999999999999999999889999998888
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCC-------------eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEK-------------SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~-------------~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
.+.++..+ |++.+++.+.+. .+.|++....-++|.+.| +.+|.++..+| ...+|+|
T Consensus 201 ~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Ky-k~Rvild 269 (467)
T KOG1358|consen 201 TISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP---LPEIVKLKNKY-KFRVILD 269 (467)
T ss_pred eeEEecCC-------CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc---cHHHHHHHhhh-eEEEEEe
Confidence 88888743 667776666321 234555666778999999 99999999999 9999999
Q ss_pred ccccccccC--CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhH--HHHHHhhhhccccCCChHHHHHHH
Q 018665 150 EIYEHIIYA--PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF--VAACNKIQSQFTSGASSISQKAGV 225 (352)
Q Consensus 150 ~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
|.++....+ |.....-...+. .+.+++++|+.-+++..| |+..++.-. ..++......++.+.++....++.
T Consensus 270 Es~SfG~lg~~GrGvteH~~v~~-~~iDiv~~sm~~alas~G---gFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~ 345 (467)
T KOG1358|consen 270 ESLSFGVLGKTGRGVTEHFGVPI-TDIDIVTASMETALASGG---GFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAI 345 (467)
T ss_pred cccccccccccCccccccCCCCc-cceeeeeecccccccccC---ceeecceeeEeeeeccccceeeeccCchhhhhhHH
Confidence 999864332 222222222331 356689999988886455 777774433 223444445566667777777777
Q ss_pred HHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHcc
Q 018665 226 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 305 (352)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (352)
.++.. .++-.++.+.++.....+.+.|+...++.+....-+.++.+.+.+..++..+. ..-.+++++....+
T Consensus 346 ~ai~i----~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e---~~lL~eivd~~i~~- 417 (467)
T KOG1358|consen 346 KAILI----EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKE---EKLLEEIVDKCIAE- 417 (467)
T ss_pred HHHHH----HhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHH---HHHHHHHHHHHHhh-
Confidence 77765 44444455555555556677777665777776665666666665433221100 00133566666656
Q ss_pred CEEeccCCCC------CCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 306 QVALVPGDAF------GDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 306 gi~i~~g~~~------~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
++.+.-.... -.+..+||++.. ++||++++.+.|++....+
T Consensus 418 ~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 418 GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 6666443221 125689999987 9999999999999987654
No 364
>PLN02452 phosphoserine transaminase
Probab=99.66 E-value=3.8e-14 Score=127.00 Aligned_cols=269 Identities=13% Similarity=0.137 Sum_probs=187.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEEecccCC-CCcccCHHHHHhhccCCeeEE
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLL 113 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~i~~~~~-~~~~~d~~~l~~~l~~~~~~i 113 (352)
+-+++..|+|.+++.+...++.+++++++.....++-+ ..++..|...+....... ....+++++++. +++.+.+
T Consensus 72 ~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v 149 (365)
T PLN02452 72 EVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TPDAKFV 149 (365)
T ss_pred eEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CCCCcEE
Confidence 45677799999999999999998999988887776544 677788864444422211 112356666532 3467788
Q ss_pred EEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccccee
Q 018665 114 ILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 192 (352)
Q Consensus 114 ~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~ 192 (352)
.+++....||+. .+ +.++. ++++|+|.+.+.. ..+..+.. ++ +...|..|.+|.+| +
T Consensus 150 ~~~hnETstGv~~~~---~~~i~-------~~~lvVDa~Ss~g----~~pidv~~----~~--v~~~saqK~lGP~G--l 207 (365)
T PLN02452 150 HICANETIHGVEFKD---YPDVG-------NVPLVADMSSNFL----SKPVDVSK----YG--VIYAGAQKNVGPSG--V 207 (365)
T ss_pred EECCCCCCCcEecCc---ccccC-------CCeEEEECCcccc----CcccCHHH----cC--EEEEecccccCCCC--e
Confidence 888888899996 55 44442 4789999998763 22233322 22 34579999998655 7
Q ss_pred EEEEcChhHHHHHHhh------------hhccccCCChHHHHHHHHHhcccCCChH-HHHHHHHHHHHHHHHHHHHhccc
Q 018665 193 GYIAGPKHFVAACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGEL 259 (352)
Q Consensus 193 g~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~ 259 (352)
|++++++++++++... ...+..+|+....+++.++++.- ..+ .++.+.++.+++.+++.+.|++.
T Consensus 208 ~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l--~~~gGl~~~~~r~~~~a~~l~~~l~~~ 285 (365)
T PLN02452 208 TIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDL--LAQGGLKAMEKRNIRKADLLYDAIDES 285 (365)
T ss_pred EEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999888764321 01122478888888888888752 122 58899999999999999999987
Q ss_pred CCceec--CC--CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHH
Q 018665 260 EGVKMS--EP--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQ 333 (352)
Q Consensus 260 ~g~~~~--~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~ 333 (352)
+|+... .+ ++...+.+.+++. ....++.+.+.++ |+...+|... -+.+|+|+-. +.++++
T Consensus 286 ~G~y~~~~~~~~rs~~~vsF~~~~~-----------~~~~~f~~~~~~~-g~~~~~G~r~--~gg~R~s~yna~~~~~v~ 351 (365)
T PLN02452 286 NGFYVCPVEKSVRSLMNVPFTLGGS-----------ELEAEFVKEAAKA-GMVQLKGHRS--VGGMRASIYNAMPLAGVE 351 (365)
T ss_pred CCcccCCCChHHhCCeEEEEEcCCc-----------hhHHHHHHHHHHC-CCcccCCccc--cCceEEECcCCCCHHHHH
Confidence 676221 11 3445566666653 1567888887766 9999998654 3349999976 999999
Q ss_pred HHHHHHHHHHhh
Q 018665 334 AAVERIKKGLLT 345 (352)
Q Consensus 334 ~~~~~l~~~~~~ 345 (352)
++++.++++.++
T Consensus 352 ~L~~~m~~f~~~ 363 (365)
T PLN02452 352 KLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHHh
Confidence 999999998765
No 365
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.65 E-value=5.6e-14 Score=117.92 Aligned_cols=272 Identities=15% Similarity=0.179 Sum_probs=192.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHH-----HHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPE-----MARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~-----~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
..+.++.++.+++-.++.++.+.++ .|++|+++...-++... .++..+.. ++ -...+.++++++.+
T Consensus 91 A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~----~~~~~~P~~~~~~~ 163 (407)
T COG3844 91 ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YD----LEGVIAPRALEEAI 163 (407)
T ss_pred CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---cc----ceeeeChHHHHHhh
Confidence 6788999999999999888887654 46888877654444332 22233321 11 22235788999999
Q ss_pred cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccc
Q 018665 107 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 186 (352)
Q Consensus 107 ~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 186 (352)
++++.+|++++++.-||+.++ +.+|-++++++ +++++-|-+|+. |.-+..+.. .+-++-+++..|.++
T Consensus 164 ~dd~AvV~L~~V~y~TGql~d---m~aiT~~AH~~-galv~wDLAHsa----Gavp~~Lh~----~gaDfaigcsyKYLN 231 (407)
T COG3844 164 TDDVAVVLLSHVNYKTGQLLD---MRAITALAHQH-GALVGWDLAHSA----GAVPVDLHA----AGADFAIGCSYKYLN 231 (407)
T ss_pred ccceEEEEeccccccccceee---HHHHHHHHHhc-CceEEeehhccc----CCcceeecc----cCCCeeeeeeceecc
Confidence 999999999999999999999 99999999999 999999999986 322222222 455688999999994
Q ss_pred -cccceeEEEEcChhHHHHHH-----------------------hhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 187 -MTGWRLGYIAGPKHFVAACN-----------------------KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 187 -~~g~~~g~l~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.|| ..+++...++..+... ...++...+++..+..++..+|+.- .+-.+.+++
T Consensus 232 gGPG-apa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDif--a~~~i~~lR 308 (407)
T COG3844 232 GGPG-APAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIF--ADVDITELR 308 (407)
T ss_pred CCCC-CceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhh--hhcCHHHHH
Confidence 244 3556655544433321 1111222345566666666666642 233478888
Q ss_pred HHHHHHHHHHHHHhccc-C--CceecCCCC----ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 243 KAFRERRDFLVKSFGEL-E--GVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~-~--g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
++.-....++++.++.. + ++++..|.. |-.+.+..| ...++.+.|.++ ||.. .+
T Consensus 309 ~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--------------~~~~V~qaLi~r-GVig----D~ 369 (407)
T COG3844 309 KKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--------------HGYQVMQALIDR-GVIG----DF 369 (407)
T ss_pred HhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--------------cHHHHHHHHHHc-Cccc----cc
Confidence 88888888888888753 2 667766643 555666665 688999999977 8753 46
Q ss_pred CCCCeEEEEeec---CHHHHHHHHHHHHHHHhhh
Q 018665 316 GDDTCIRISYAA---SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 316 ~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~ 346 (352)
..++.+|+.++. +-.|+-.+++.|.+++++.
T Consensus 370 R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 370 REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred cCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 679999999987 7799999999999999864
No 366
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.65 E-value=1.5e-16 Score=137.77 Aligned_cols=237 Identities=19% Similarity=0.193 Sum_probs=158.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~ 79 (352)
-|+.++...+++ +.+++.++ .+..+++++||.++..++++++++++.|++..+.|.... .....
T Consensus 24 ~Yg~D~~~~~l~------~~i~~l~g-------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~ 90 (290)
T PF01212_consen 24 AYGEDPTTARLE------ERIAELFG-------KEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEEL 90 (290)
T ss_dssp CTTSSHHHHHHH------HHHHHHHT-------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHH
T ss_pred ccCCChhHHHHH------HHHHHHcC-------CCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHh
Confidence 377788888888 99999985 566679999999999999999999999999998765333 33466
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCC-cccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNP-TGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~np-tG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.|.+++.++.++ +..+++++|++.+.. ++++|++++++|. .|++++.+++++|.++|+++ |+.++.|.+.
T Consensus 91 ~G~~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~-gl~lhmDGAR 167 (290)
T PF01212_consen 91 SGAKLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREH-GLPLHMDGAR 167 (290)
T ss_dssp TTCEEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHH-T-EEEEEETT
T ss_pred cCcEEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhC-ceEEEEehhh
Confidence 899999998753 256999999999853 5789999999885 58999999999999999999 9999999986
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHH-----HHH
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAG-----VAA 227 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 227 (352)
-.... .....++..+.. .-+.+..|++|.+|+++ -+.++.+++++++..................++ ..+
T Consensus 168 l~~a~-~~~~~~~~e~~~--~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~ 242 (290)
T PF01212_consen 168 LANAA-AALGVSLAEIAA--GADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAA 242 (290)
T ss_dssp HHHHH-CHHHHHHHHHHT--TSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHH
T ss_pred HHHhh-hcccccHHHHhh--hCCEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHH
Confidence 53211 011122333221 23377888999887544 466678999877655443333221111111111 011
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 265 (352)
+.. .+.+ .....+-.++.+.+.+.|+.+ +..+.
T Consensus 243 l~~---l~~~-~~~~~~~~~~A~~La~~l~~~-~~~~~ 275 (290)
T PF01212_consen 243 LRA---LELW-LERARHANAMAKRLAAGLEAL-GGVLP 275 (290)
T ss_dssp HCH---EECS-HHHHHCHHHHHHCHHHCHHEE-CEEEE
T ss_pred HHH---HHhh-HHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 111 0222 334455666778888888887 43343
No 367
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.62 E-value=4.7e-13 Score=122.32 Aligned_cols=240 Identities=17% Similarity=0.132 Sum_probs=159.6
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 87 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i 87 (352)
.-..+.. +..|+.++ .....+++||+|.++..++.+++.+||.||++.+||.+....+-..|..++++
T Consensus 70 G~i~eAq------e~aA~~fg------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl 137 (557)
T COG1982 70 GPIKEAQ------ELAARVFG------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYL 137 (557)
T ss_pred ccHHHHH------HHHHHHhC------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEe
Confidence 3445677 88888886 66789999999999999999999999999999999999999999999999998
Q ss_pred cccCCCC----cccCHHHHHhhccC--Ce-eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 88 PTRISEN----FLLDPKVLESKLTE--KS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 88 ~~~~~~~----~~~d~~~l~~~l~~--~~-~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
....+.. .+++.+.+++.+.+ .. +++++.+|++ .|.+++ +++|.++++++ ++++.+|+++.... +.
T Consensus 138 ~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~-~a~v~~deah~~~~--~~ 210 (557)
T COG1982 138 EPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHY-GAWVLYDEAHPAHF--DF 210 (557)
T ss_pred cCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhc-CceEEhhhcCcccc--cc
Confidence 8764432 34799999998853 44 7788888875 689999 99999999999 99999999987532 11
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcCh--h-HHHHHHhh-hhccccCCChHHHHHHHHHhcc-cCCCh
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--H-FVAACNKI-QSQFTSGASSISQKAGVAALGL-GYAGG 235 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~--~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~~~~~ 235 (352)
. ..+.......+.++++.|.+|.++ +....+++-... . -.+++... ....+.+|+.+..+.+-.+-.. +....
T Consensus 211 ~-~~l~~~~~~~~~~~~tqS~HK~l~-alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~ 288 (557)
T COG1982 211 S-PMLPESALNGGADFVTQSTHKLLA-ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGR 288 (557)
T ss_pred c-ccCcchhhhcCceEEEechhhhhh-hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhH
Confidence 1 111112222467799999999985 443445554442 1 12233222 2223334444444333321111 00012
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 268 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 268 (352)
...++..+..-+.++.+++.+++++++.+..+.
T Consensus 289 ~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~ 321 (557)
T COG1982 289 ELWQEVIDEAIDFRKALRRLINEIGFFPVLQPE 321 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence 222333455555666666777666566665443
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.60 E-value=6.8e-13 Score=117.74 Aligned_cols=268 Identities=10% Similarity=0.041 Sum_probs=181.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEE-ecCCCCCChH--HHHHhcCCeEEEecccCCCC--cccCHHHHHhhccCCeeE
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVI-IPAPFWVSYP--EMARIADATPVILPTRISEN--FLLDPKVLESKLTEKSRL 112 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl-~~~~~~~~~~--~~~~~~g~~v~~i~~~~~~~--~~~d~~~l~~~l~~~~~~ 112 (352)
=++++.|+|.++..+...++.++++++ +....+++-. ..++..| ++..+......+ ..++++++ .++++.+.
T Consensus 70 Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~ 146 (364)
T PRK12462 70 VVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPF 146 (364)
T ss_pred EEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcE
Confidence 356667799999999999999888665 5555555433 5667777 555554322222 23456665 23446777
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccccee
Q 018665 113 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 192 (352)
Q Consensus 113 i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~ 192 (352)
+.+++....+|...+ ++.+.+ ++++|+|.+.+.+. .+..+.. + .++..+..|.+|.+| +
T Consensus 147 v~~t~NETstGv~~~--------~~~~~~-~~llvvD~sS~~~s----~pid~~~----~--dvi~agsQKnlgP~G--l 205 (364)
T PRK12462 147 RHYVSNETVEGLQFP--------DAAGLP-DSPLIADMSSDFMS----RPFDVEA----Y--GMVYAHAQKNLGPAG--V 205 (364)
T ss_pred EEEccCCCCceEecC--------cccccC-CCeEEEEcCchhhC----CCCChHH----c--cEEEeeccccCCCCc--e
Confidence 777777789999986 222246 89999999877532 1222221 2 488888999999555 7
Q ss_pred EEEEcChhHHHHHHhh------------hhccccCCChHHHHHHHHHhcccCCChH--HHHHHHHHHHHHHHHHHHHhcc
Q 018665 193 GYIAGPKHFVAACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGE 258 (352)
Q Consensus 193 g~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~ 258 (352)
+.++.+++.+++.... ......+|+.+..+++..+++-. .++ .++.+.++.++..+.+.+.+.+
T Consensus 206 tvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i--~~e~GGl~~~~~r~~~ka~~ly~~id~ 283 (364)
T PRK12462 206 TVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWI--RDEIGGVHAMRDINARKAAMLYATLDA 283 (364)
T ss_pred EEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHH--HHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 8888999887664321 11122367888888888887642 134 7889999999999999999998
Q ss_pred cCCceecC----CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHH
Q 018665 259 LEGVKMSE----PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTL 332 (352)
Q Consensus 259 ~~g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l 332 (352)
.+++.... .++-+.+.+++++.. ...++.+.+.++ |+.-..| ++..+.+|+|+-. +.|.+
T Consensus 284 ~~~~~~~~~~~~~RS~mnv~f~~~~~~-----------l~~~f~~~a~~~-gl~~lkG--hr~vgg~Ras~yna~~~e~v 349 (364)
T PRK12462 284 LNEVIDCHAHRAARSTMNVAFRFRQPR-----------LDTLFKEQSTEA-GFCGLSG--HRSIGGIRASLYNAVSEQAV 349 (364)
T ss_pred CCCcccCCCChhhcCcceEEEEcCCHH-----------HHHHHHHHHHHC-CCccccC--CcccCceEEEcCCCCCHHHH
Confidence 86554432 233444555655431 456777776655 8776554 3446789999976 88999
Q ss_pred HHHHHHHHHHHhh
Q 018665 333 QAAVERIKKGLLT 345 (352)
Q Consensus 333 ~~~~~~l~~~~~~ 345 (352)
+++++.++++-++
T Consensus 350 ~~L~~fm~~f~~~ 362 (364)
T PRK12462 350 SRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 369
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.58 E-value=8.2e-14 Score=124.54 Aligned_cols=242 Identities=14% Similarity=0.130 Sum_probs=149.2
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChHH-HHHhcC---------
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYPE-MARIAD--------- 81 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~~-~~~~~g--------- 81 (352)
..+++.+. ..+ -..+.+++++|+++|++.+++... ....+|+....+|++... .+...+
T Consensus 62 ~~la~~L~~~~p--~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~ 139 (339)
T PF00202_consen 62 AELAEKLAELFP--GGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFG 139 (339)
T ss_dssp HHHHHHHHHHSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTC
T ss_pred hhhhhhhhhccc--cccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcccccccc
Confidence 56666665 332 145799999999999999998765 134688888888876543 222111
Q ss_pred ---CeEEEecccCCCC---cccCHHHHHhh----ccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 82 ---ATPVILPTRISEN---FLLDPKVLESK----LTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 82 ---~~v~~i~~~~~~~---~~~d~~~l~~~----l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
..+..+|.+.... .....+.+++. -.+++.++++...+...|.. +|.+.+++|.++|+++ |+++|+||
T Consensus 140 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~-gillI~DE 218 (339)
T PF00202_consen 140 PLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREH-GILLIADE 218 (339)
T ss_dssp SSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHT-T-EEEEEE
T ss_pred ccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehccccccc-ccceeccc
Confidence 2334455432110 00011112222 24567778877777666644 5678999999999999 99999999
Q ss_pred cccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcc
Q 018665 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
++.++...|.. .......-.+| +.+++|.++ +|.++|.+++++++.+.+.......+++.+++.+.++.+.++.
T Consensus 219 V~tG~gRtG~~-~a~~~~gv~PD----iv~~gK~l~-gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~ 292 (339)
T PF00202_consen 219 VQTGFGRTGKF-FASEHYGVDPD----IVTFGKGLG-GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEI 292 (339)
T ss_dssp TTTTTTTTSSS-SGHHHHTSSSS----EEEEEGGGG-TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHH
T ss_pred ccccccccCCc-cceecccccCc----ccccccchh-hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHh
Confidence 99999777753 22222222222 344569998 7799999999999998876655667788999999999999886
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhccc----CCceecCCCCceEEEeec
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQGAFYLFIDF 277 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~g~~~~~~~ 277 (352)
-. -+++.++++++-+++.+.|+++ +-+.-+. .-|.++.+++
T Consensus 293 ~~-----~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-g~Gl~~~ie~ 337 (339)
T PF00202_consen 293 LE-----EEDLLERVRELGERLREGLRELAARYPLIGEVR-GIGLMIGIEL 337 (339)
T ss_dssp HH-----HTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEE-EETTEEEEEE
T ss_pred hc-----cHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-eeCeEEEEEE
Confidence 21 1223344444444555544432 2233332 3344455554
No 370
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.55 E-value=2.4e-12 Score=125.65 Aligned_cols=280 Identities=9% Similarity=0.118 Sum_probs=192.1
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEecCCCCCChHHHHH----hcC
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMAR----IAD 81 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~~~~~vl~~~~~~~~~~~~~~----~~g 81 (352)
....|+.++.|.+.++++.+ ++..|.-+..++|++-+.++++.. +++++|++++..|+.+...++ ..|
T Consensus 104 sQG~Le~l~e~Qt~i~eLtG-----m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g 178 (939)
T TIGR00461 104 SQGRLEALLNFQTVVSDLTG-----LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFG 178 (939)
T ss_pred hhHHHHHHHHHHHHHHHHHC-----CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcC
Confidence 44568888999999999998 778888888899988887776642 234789999999998886555 778
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
++++.++ +++|++.+ ++.++++.+|+. .|.+.+ +++|++++++. |.+++++.-...
T Consensus 179 ~~v~~~~----------~~~l~~~~--~~~~v~~q~Pn~-~G~ied---~~~i~~~~h~~-gal~~~~ad~~a------- 234 (939)
T TIGR00461 179 IEVIVVD----------CSDIKKAV--DVFGCLLQYPAT-DGSILD---YKQLIDALHSH-KSLVSVAADLMA------- 234 (939)
T ss_pred cEEEEEc----------HHHHhhcC--CEEEEEEECCCC-CeEEec---HHHHHHHHHHc-CCEEEEEechHH-------
Confidence 8888874 34465555 567777777765 678776 99999999999 999998543221
Q ss_pred ccccccCCCCCCceEEEeccccccc----cccceeEEEEcChhHHHHHHh----------------------------hh
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNK----------------------------IQ 209 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~g~l~~~~~~~~~~~~----------------------------~~ 209 (352)
..+...+.+++-+|++++. |.|| .+|...|++.+++++.+.+.. ..
T Consensus 235 -l~ll~~Pge~GaDi~vg~~-q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRek 312 (939)
T TIGR00461 235 -LTLLTPPGHYGADIVLGSS-QRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDK 312 (939)
T ss_pred -hCCcCCHHHcCCcEEeeCC-CccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccc
Confidence 1122223334555776654 3333 346678999888887776421 00
Q ss_pred hccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE--EEeecCCccCCcccC
Q 018665 210 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEG 287 (352)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~ 287 (352)
..++.+.+....+..+.+... ....+.++++.++...+..++.+.|++. |+++..+ .+| +.++++..
T Consensus 313 AtSNICt~qaL~a~~a~~Y~~-~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~--~fF~~~~v~~~~~------- 381 (939)
T TIGR00461 313 ATSNICTAQVLLANVASSYCV-YHGPKGLKNIARRIHSLTSILANGLEND-PHELINK--TWFDTLTVKVGNG------- 381 (939)
T ss_pred cCcchhHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CccceEEEEeCCC-------
Confidence 011112233222222221111 1247889999999999999999999985 9888755 333 33455322
Q ss_pred CCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHH
Q 018665 288 FGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 340 (352)
Q Consensus 288 ~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~ 340 (352)
++.++.+.+.++ ||.+... .++.+++|+.. +.+|++.+++.+.
T Consensus 382 -----~~~~i~~~~~~~-gi~l~~~----~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 382 -----ISSELLKAAEEF-NINLRAV----DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -----CHHHHHHHHHHC-CCeeeec----CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 678899998876 8887552 35689999987 8899999999995
No 371
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.52 E-value=2.1e-12 Score=115.80 Aligned_cols=283 Identities=16% Similarity=0.221 Sum_probs=163.7
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChHHHHH----hcC
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMAR----IAD 81 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~~~~~----~~g 81 (352)
....|+.+++|...+++..+ ++..+.-+-.+++++-+.+..+. .++.++|+++...|+.+...++ ..|
T Consensus 105 sQG~Lq~lfe~Qs~i~eLTG-----mdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g 179 (429)
T PF02347_consen 105 SQGRLQALFEYQSMICELTG-----MDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLG 179 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHT-----SSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCC
T ss_pred HHHHHHHHHHHHHHHHHhhC-----CCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCC
Confidence 34467788899999999997 66666677778887777665553 2334699999999999887555 478
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
++++.++.+..+. .| ++++.+|++.+||+ .|..-+ +++|.++++++ |.++++ .+.- ...
T Consensus 180 ~~iv~~~~~~~~~--~d--------~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~-gal~~~-~ad~-~aL---- 238 (429)
T PF02347_consen 180 IEIVEVPLDEDGT--TD--------DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAA-GALVIV-GADP-NAL---- 238 (429)
T ss_dssp EEEEEE-BBTTCS--B---------STTEEEEEEESS-T-TSB--T---HHHHHHHHHHT-T-EEEE-CGGC-CGC----
T ss_pred eEEEEecccccCC--cc--------ccCeEEEEeecCCC-CceEee---HHHHHHHHHHc-CCEEEE-ecCH-HHH----
Confidence 9999998874332 23 66899999999986 678777 99999999999 999886 3321 111
Q ss_pred ccccccCCCCCCceEEEeccccccc----cccceeEEEEcChhHHHHHH----------------------------hhh
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACN----------------------------KIQ 209 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~g~l~~~~~~~~~~~----------------------------~~~ 209 (352)
....-+.+++-+|++++ +|.|| .+|..+|++.+++++++.+. +..
T Consensus 239 --~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReK 315 (429)
T PF02347_consen 239 --GGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREK 315 (429)
T ss_dssp --CTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCC
T ss_pred --hCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccc
Confidence 11122233455588776 67664 34677899999888777643 111
Q ss_pred hccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE-EEeecCCccCCcccCC
Q 018665 210 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY-LFIDFSTYYGSEAEGF 288 (352)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~-~~~~~~~~~~~~~~~~ 288 (352)
..++.+.|....+..+.+.- ..++.+.++++......+..++.+.|++..+..+. ..-|+ .++..++..
T Consensus 316 AtSNIctnqaL~A~~a~~Yl-~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~--~~~f~e~v~~~~~~~------- 385 (429)
T PF02347_consen 316 ATSNICTNQALLALAAAIYL-AYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFD--NPFFFEFVVVFSKDK------- 385 (429)
T ss_dssp STT---SS-HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS--SSSBSSEEEEESS-H-------
T ss_pred hhhhhhhhHHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC--CCCceeeeeecCCcH-------
Confidence 12233344444332222211 11247899999999999999999999986333332 22232 222222100
Q ss_pred CCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHH
Q 018665 289 GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERI 339 (352)
Q Consensus 289 ~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l 339 (352)
...++.++.... |+... +...+++-+++.- +.+||+++++.|
T Consensus 386 ----~~~~l~~~~~~~-gl~~~----~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 386 ----EVEELLKRGIEG-GLNLR----YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ----HHHHHHHTT-----EEEG----GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ----HHHHHHHHHHhc-CCCcc----ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 233344444432 54332 2235578888876 789999998864
No 372
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.52 E-value=2.5e-12 Score=113.13 Aligned_cols=277 Identities=17% Similarity=0.172 Sum_probs=189.0
Q ss_pred EEeCChHHHHHHHHHHh---cC--CC---CEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCee
Q 018665 40 LVSNGAKQSILQAVLAV---CS--PG---DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 111 (352)
Q Consensus 40 ~~~~g~~~a~~~~~~~l---~~--~~---~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~ 111 (352)
..|.|+|+++..+-+.. .. ++ .+++.+...+-.+...++.++++++.+|+++ +++.+|+.++.+.++++++
T Consensus 142 ~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~-~~~~~D~~k~~~~i~eNti 220 (491)
T KOG1383|consen 142 CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDE-GDYRVDPGKVVRMIDENTI 220 (491)
T ss_pred ccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccc-cceEecHHHHHHHhccceE
Confidence 55678888855444432 11 12 5788888888889999999999999999986 7889999999999999999
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHh-CCCEEEEecccccccccC-CCCccccccCCCCCCceEEEecc----cccc
Q 018665 112 LLILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVNGF----SKAF 185 (352)
Q Consensus 112 ~i~i~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~livD~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~----sK~~ 185 (352)
.++.+.|+.|+|..-+ +++|.++..+ + ++++.+|.+-++|... +. .... ....++..+.|. +|.
T Consensus 221 ~lv~~~~~~p~G~~e~---ve~l~~l~~e~w-~ipiHvDa~~GgFi~p~~~--~~~~---~fdFr~p~V~Sisa~~HKY- 290 (491)
T KOG1383|consen 221 MLVGSLPNFPTGEIED---VEKLADLLLEIW-DIPIHVDACLGGFINPAGY--LNEE---EFDFRVPGVTSISADGHKY- 290 (491)
T ss_pred EEEEEcCCCCccchhh---HHHHHHHHHHHh-CCceeecccCccccccccc--cCcc---ccccCCCCceeEeecccee-
Confidence 9999999999999988 8888998888 9 9999999999887542 11 1111 111233444443 454
Q ss_pred ccccceeEEEE-cChhHHH-H-------HHhhhhccccCC-----ChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHH
Q 018665 186 AMTGWRLGYIA-GPKHFVA-A-------CNKIQSQFTSGA-----SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 251 (352)
Q Consensus 186 g~~g~~~g~l~-~~~~~~~-~-------~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (352)
|+..-+.+|++ .++++.. + +......++... ...+|.+..-.+ +.+...+..+++.+....
T Consensus 291 Gl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~l-----G~eGY~~~~~~ive~~~~ 365 (491)
T KOG1383|consen 291 GLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSL-----GEEGYRENTQNIVETARK 365 (491)
T ss_pred eeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHH
Confidence 55555678877 3333322 1 112222222222 222222222222 467778888889999999
Q ss_pred HHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec---C
Q 018665 252 LVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---S 328 (352)
Q Consensus 252 l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~ 328 (352)
+++.+++++++.++.++.--++...-... +..++.+.|.+. |..+..-. .|..+.+++.. .
T Consensus 366 l~egie~i~~i~i~gkp~vs~~~~~s~~~------------~i~elsd~l~~~-GW~lnalq---~P~a~Hi~vt~~~~~ 429 (491)
T KOG1383|consen 366 LREGIENIKGIKIVGKPLVSFILFGSNDV------------NIFELSDLLRKK-GWILNALQ---FPAAIHICVTRVHAR 429 (491)
T ss_pred HHHhhhccccceecCCCcEEEEEccCCcc------------chhhhhHHHHhc-CcCccccC---CCCceEEEEEeeecc
Confidence 99999999899998765444343332221 677888887765 87765432 35567777765 5
Q ss_pred HHHHHHHHHHHHHHHhhhCC
Q 018665 329 LTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 329 ~~~l~~~~~~l~~~~~~~~~ 348 (352)
++-.++++..|+++++++..
T Consensus 430 ~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 430 EDVADRFVADIRKVVEELKS 449 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 56678999999999988755
No 373
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.51 E-value=3.8e-12 Score=114.83 Aligned_cols=253 Identities=17% Similarity=0.151 Sum_probs=161.5
Q ss_pred CCCChhhhccchhhHHHHHHHH-hcCCCC-----CCCcEEEeCChHHHHHHHHHHhcC--------------CCCEEEec
Q 018665 7 SQGTLQMRVLWSFVQQFVINLK-ENGLSY-----TPDQILVSNGAKQSILQAVLAVCS--------------PGDEVIIP 66 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~-~~~~~~-----~~~~i~~~~g~~~a~~~~~~~l~~--------------~~~~vl~~ 66 (352)
.+...+++ +.+.+++. -.|++. +...=++|+|+|+++..++.+..+ +.-.|++.
T Consensus 74 ~P~~~~~E------~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s 147 (373)
T PF00282_consen 74 SPAATEIE------REVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVS 147 (373)
T ss_dssp SHHHHHHH------HHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEE
T ss_pred ccccccch------HHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccc
Confidence 34445566 77777877 666662 124568899999999888766421 11257777
Q ss_pred CCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC---C---eeEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 018665 67 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---K---SRLLILCSPSNPTGSVYPKNLLDEIARIVAK 140 (352)
Q Consensus 67 ~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~---~---~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~ 140 (352)
.-.|.++..++...|+.++.||+++ ++.+|+++|++++.+ + +.+|+.+..+..+|.+-| +++|+++|++
T Consensus 148 ~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~ 222 (373)
T PF00282_consen 148 EQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEK 222 (373)
T ss_dssp TTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHH
T ss_pred cccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhccc
Confidence 7799999999999999999999985 556999999998853 2 334555666888999988 9999999999
Q ss_pred CCCEEEEecccccccccC-CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhh----hh----
Q 018665 141 HPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKI----QS---- 210 (352)
Q Consensus 141 ~~~~~livD~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~----~~---- 210 (352)
+ |+++.||.++++..+- .........+ ..-+-+..++||.++ ....+|+++.+++ .+...... ..
T Consensus 223 ~-~~wlHVDaA~gg~~~~~~~~~~~~~gi---~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~ 297 (373)
T PF00282_consen 223 Y-NIWLHVDAAYGGSALLSPEYRHLLFGI---ERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDR 297 (373)
T ss_dssp C-T-EEEEEETTGGGGGGHCTTGGGGTTG---GGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-S
T ss_pred c-ceeeeeccccccccccccccccccccc---ccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhccccc
Confidence 9 9999999999983321 1111111111 122356778999998 5578898876553 33322100 00
Q ss_pred ---------ccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEee
Q 018665 211 ---------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 276 (352)
Q Consensus 211 ---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~ 276 (352)
..+...+. ...++...+.....+.+.+++..++..+..+++.+.|++.++++++.+.....+.++
T Consensus 298 ~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr 371 (373)
T PF00282_consen 298 ESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFR 371 (373)
T ss_dssp SS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEE
T ss_pred ccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEE
Confidence 01112222 222222222211124677888899999999999999999988888865554445444
No 374
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.49 E-value=9.1e-13 Score=109.40 Aligned_cols=295 Identities=13% Similarity=0.117 Sum_probs=180.1
Q ss_pred CCcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChHHHHHh-------cC---CeEEEec---ccCC--CCc--
Q 018665 36 PDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMARI-------AD---ATPVILP---TRIS--ENF-- 95 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~~~~~~-------~g---~~v~~i~---~~~~--~~~-- 95 (352)
-+-+++++|+++|++.+++.. .+. ..+++.+..|+++....-. .| .++.++. .++- +.+
T Consensus 102 Lsvc~F~NSGSEANDLALRLAR~ftkh-qDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~ 180 (452)
T KOG1403|consen 102 LSVCFFVNSGSEANDLALRLARNFTKH-QDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD 180 (452)
T ss_pred ceEEEEecCCchhhHHHHHHHHhhccc-CceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence 457899999999999998864 334 4456666666665533211 11 1112221 1110 000
Q ss_pred ---------ccCHHHHHhhcc------CCeeEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 96 ---------LLDPKVLESKLT------EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 96 ---------~~d~~~l~~~l~------~~~~~i~i~~p~nptG~~~~~~-~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
..-.+.+++.+. .+..+.+-.+.++-.|++.|+. ..+++++..+.+ |.+.|.||++.+|+..|
T Consensus 181 ~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a-GGv~IaDEVQvGFGRvG 259 (452)
T KOG1403|consen 181 KMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA-GGVCIADEVQVGFGRVG 259 (452)
T ss_pred ccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC-CCeEEeehhhhcccccc
Confidence 011233444332 1334445455677788876654 799999999999 99999999999998877
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHh--hhhccccCCChHHHHHHHHHhcccCCChHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
...+++.-. +-+.-+.++.|.+| .|.+++.+++.+++.+.+.. ...+.+++.|+.+.++..+.+..- .++.
T Consensus 260 ~hyWafq~y----~fiPDIVtmgKpmG-NGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~--e~E~ 332 (452)
T KOG1403|consen 260 SHYWAFQTY----NFIPDIVTMGKPMG-NGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVC--EDEN 332 (452)
T ss_pred hhhhhhhhh----ccccchheecccCC-CCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHH--hhhh
Confidence 655554432 22233677889999 99999999999999998865 455667899999999988888752 1344
Q ss_pred HHHHHHHHHHHHHHHHHHhccc-CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGEL-EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~-~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
+++...++-.....+...++.. +-+.-+ ...|.|+-+++-+.-..+.+.. ..+.-+..+|.+.++|++..-+.
T Consensus 333 Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv-RGvGLFiGIdLVkD~~tRtP~t---k~A~~~v~rlke~y~VLlsaDGP-- 406 (452)
T KOG1403|consen 333 LQEHAQQVGEKLEVLLRRLKQKHECIGDV-RGVGLFIGIDLVKDRKTRTPDT---KEAHWVVNRLKELYRVLLSADGP-- 406 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccceecc-ccceEEEeeeeecccccCCCcH---HHHHHHHHHHHHhhhEEEecCCC--
Confidence 5554444444333333334321 112111 2346666666532111111000 13556778888888999876432
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
..+.+.|-++. ++++.++.+..|.+++.-
T Consensus 407 h~NilKiKPPmCFneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 407 HRNILKIKPPMCFNEENADEFVLGLDEILTV 437 (452)
T ss_pred CCceeecCCCcccChhhHHHHHHHHHHHHHH
Confidence 23456665443 888888888888777753
No 375
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.48 E-value=1.1e-11 Score=105.49 Aligned_cols=317 Identities=15% Similarity=0.144 Sum_probs=211.6
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-----CEEEecCCCCCCh-HHHH
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-----DEVIIPAPFWVSY-PEMA 77 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~-----~~vl~~~~~~~~~-~~~~ 77 (352)
|+.+.++..|. ++..+.++ -+.++.+..+..|-++.+..+.+++ .+.++++..|+.+ ....
T Consensus 75 Yagsrs~~~L~------~avkdifG-------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~ 141 (471)
T COG3033 75 YAGSRSYYALA------DAVKDIFG-------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHI 141 (471)
T ss_pred hcccccHHHHH------HHHHHhcC-------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHH
Confidence 66777777788 88888875 4778889999898888888776543 4556666666544 4567
Q ss_pred HhcCCeEEEecccCCCC--------cccCHHHHHhhccC----CeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 78 RIADATPVILPTRISEN--------FLLDPKVLESKLTE----KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~--------~~~d~~~l~~~l~~----~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
+..|..++-+++++..+ ..+|++.|++.+++ ++..|++.-. |.-.|+..+.+.+++..++|++| ++
T Consensus 142 ~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky-~i 220 (471)
T COG3033 142 QINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKY-DI 220 (471)
T ss_pred HhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHc-CC
Confidence 78888888888776443 23789999999963 4555555433 55788999999999999999999 99
Q ss_pred EEEecccccc-ccc------CCCCccccccCCCC--CCceEEEeccccccccccceeEEEEcChh----HHHHHHhhh--
Q 018665 145 LVLSDEIYEH-IIY------APATHTSFASLPGM--WERTLTVNGFSKAFAMTGWRLGYIAGPKH----FVAACNKIQ-- 209 (352)
Q Consensus 145 ~livD~~~~~-~~~------~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~~~g~l~~~~~----~~~~~~~~~-- 209 (352)
+++.|.+... ..| .+....+...+... .--+-++.|.-|. |+.-+ .|++..+.+ +...++...
T Consensus 221 pvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~ 298 (471)
T COG3033 221 PVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVV 298 (471)
T ss_pred cEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEe
Confidence 9999988541 111 11122333322110 0011334555554 33321 256655544 444444321
Q ss_pred ---hccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCC-cc
Q 018665 210 ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EA 285 (352)
Q Consensus 210 ---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~ 285 (352)
..+..+.+.-.+.+++..|..... .+|++.+..+++ +|.+.|++. |+.++.|.+|.-++++..+.... ..
T Consensus 299 ~eG~~tYGgl~GrdmealAvGL~e~~~-~~yl~~Rv~Qv~----YL~~~l~~~-GVpi~~paGGHavfvda~~~lphip~ 372 (471)
T COG3033 299 QEGFPTYGGLAGRDMEALAVGLREGVN-FDYLAHRVAQVQ----YLADGLEEA-GVPIVQPAGGHAVFVDAGKFLPHIPA 372 (471)
T ss_pred eccccccCcccchhHHHHHHHHHHhcC-cHHHHHHHHHHH----HHHHHHHhc-CCeeEecCCCceEEeehhhhcCCCCh
Confidence 233456777788888888776543 678888777665 777888887 99999999999888874322211 11
Q ss_pred cCCCCCCChHHHHHHHHHccCEEeccCCCCCC-------------CCeEEEEeec---CHHHHHHHHHHHHHHHhhh
Q 018665 286 EGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------DTCIRISYAA---SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 286 ~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-------------~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~ 346 (352)
+.+ .++.++.+|.++.||-..--+.+.. -..+|+.++. +.+.+|-.++.+++..+.-
T Consensus 373 eqF----paqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 373 EQF----PAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred hhC----cHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 222 6788999999999986544333321 1469999987 8889999999888887654
No 376
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.43 E-value=6.8e-11 Score=101.77 Aligned_cols=170 Identities=17% Similarity=0.252 Sum_probs=112.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEe---CChHHHHHHHHHHhcCCCCEEEec-CCCCCChHHH----------HHhcCCeEEE
Q 018665 21 QQFVINLKENGLSYTPDQILVS---NGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPEM----------ARIADATPVI 86 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~---~g~~~a~~~~~~~l~~~~~~vl~~-~~~~~~~~~~----------~~~~g~~v~~ 86 (352)
+..|+.++ .+.-++- -|+|+|+..++..++++||+++.. ..-|..+... ++.+|++...
T Consensus 61 ~iyA~vfg-------aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~ 133 (403)
T PF06838_consen 61 RIYADVFG-------AEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYRE 133 (403)
T ss_dssp HHHHHHCT--------SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE
T ss_pred HHHHHHhC-------chhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEE
Confidence 67777764 4443333 588999999999999999998854 4555554433 4678999999
Q ss_pred ecccCCCCcccCHHHHHhhccCCeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHh-CCCEEEEecccccccccCCCCccc
Q 018665 87 LPTRISENFLLDPKVLESKLTEKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~-~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
+++.++ ..+|.+.++++++++++++++--. .+..=..++.++++++++++++ +|+++++||++|++|. ....+.
T Consensus 134 v~L~~d--g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFv--E~~EP~ 209 (403)
T PF06838_consen 134 VPLTED--GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFV--ETQEPT 209 (403)
T ss_dssp --B-TT--SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTT--SSS-GG
T ss_pred EeecCC--CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceec--cccCcc
Confidence 999854 459999999999999999887544 3444455788889999998875 3799999999999875 322222
Q ss_pred cccCCCCCCceEEEeccccccccccc--eeEEEEcChhHHHHHHhh
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGW--RLGYIAGPKHFVAACNKI 208 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~--~~g~l~~~~~~~~~~~~~ 208 (352)
- .+-+++.+|+=|..| +|+ -.||++++.+++++....
T Consensus 210 ~------vGADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~R 248 (403)
T PF06838_consen 210 E------VGADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYR 248 (403)
T ss_dssp G------GT-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHH
T ss_pred c------cchhheeccceeCCC-CCccCcCCEEechHHHHHHHHhh
Confidence 2 244499999999997 664 578999999999987543
No 377
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=1.7e-10 Score=98.63 Aligned_cols=287 Identities=15% Similarity=0.130 Sum_probs=176.4
Q ss_pred hcCCCCCCCcEEEe-CChHHHHHHHHHHhcCCCCEEE---ecCCCCCChHHHHHhcC--C-----eEEEecccCCCCccc
Q 018665 29 ENGLSYTPDQILVS-NGAKQSILQAVLAVCSPGDEVI---IPAPFWVSYPEMARIAD--A-----TPVILPTRISENFLL 97 (352)
Q Consensus 29 ~~~~~~~~~~i~~~-~g~~~a~~~~~~~l~~~~~~vl---~~~~~~~~~~~~~~~~g--~-----~v~~i~~~~~~~~~~ 97 (352)
-++.+.+...|-+. -|++-|+..+..++++++++|- +|+..|.++-..-.... . +--++.+++ ...-+
T Consensus 98 aF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~-~TG~I 176 (477)
T KOG2467|consen 98 AFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP-STGYI 176 (477)
T ss_pred HhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC-CCCce
Confidence 34443333333222 4556778889999999999987 45555544432222111 1 112233443 33458
Q ss_pred CHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCccccccCCCCCCce
Q 018665 98 DPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 98 d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|.|.|++.... ++++||.-...+ ...++ ..++.++|.+. |.+++.|-+|- ++...+..+.+|.. .+
T Consensus 177 DYD~Le~~A~~frPk~iiaG~SaY--~R~~D---YaR~R~Iad~~-gA~Lm~DMAHISgLVAA~vipsPFey------~D 244 (477)
T KOG2467|consen 177 DYDKLEKTATLFRPKLIIAGTSAY--SRLID---YARFRKIADKV-GAYLMADMAHISGLVAAGVIPSPFEY------CD 244 (477)
T ss_pred ehHHHHHHHHhcCCcEEEeccccc--hhhcc---HHHHHHHHHhc-CceeehhhhhHHHHHhcccCCCcccc------cc
Confidence 99999986654 778777532222 23445 78888889999 99999999975 45445554444432 33
Q ss_pred EEEeccccccccccceeEEEEcChh---------------HHHHHHhh-hhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKH---------------FVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~---------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
|++++.+|++ .|.|.|.|.-++. +-+++... ....-.+|+.....+++.+|.+.. ...+.
T Consensus 245 iVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~--tpefk 320 (477)
T KOG2467|consen 245 IVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM--TPEFK 320 (477)
T ss_pred eeeccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC--CHHHH
Confidence 8999999987 7888898875431 11112111 111114566666667777777632 45567
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCC-CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-- 316 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-- 316 (352)
+-..++.++.+.+.+.|.+. |.+++... ....+++++.... .+...+ +.+++..+|.+.-.+.++
T Consensus 321 ~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G----------~dGarv-E~vle~~~I~~NKNtvpGD~ 388 (477)
T KOG2467|consen 321 EYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKG----------VDGARV-EKVLELCHIALNKNTVPGDK 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccC----------CchHHH-HHHHHHhhhhhcCCcCCCCc
Confidence 77788888999999999988 88887543 4445666765431 144444 333444456654444343
Q ss_pred ---CCCeEEEEeec------CHHHHHHHHHHHHHHHh
Q 018665 317 ---DDTCIRISYAA------SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 317 ---~~~~iRi~~~~------~~~~l~~~~~~l~~~~~ 344 (352)
.|+.+||..+. -++|+++..+.|.++++
T Consensus 389 Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 389 SALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred cccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 36889997654 56888888888877764
No 378
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.38 E-value=4e-10 Score=98.68 Aligned_cols=292 Identities=13% Similarity=0.138 Sum_probs=195.1
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChHHHHHh----
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMARI---- 79 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~~~~~~---- 79 (352)
.-....|+.+-.|...++++.+ ++-.|--+-.++|.+=+.+..+. .++..+++++..+|+.+...++.
T Consensus 113 EISQGrLqaLfefQtlv~dLTG-----m~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~ 187 (450)
T COG0403 113 EISQGRLEALFEFQTLVADLTG-----LDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEG 187 (450)
T ss_pred hhhhHHHHHHHHHHHHHHHHhC-----CCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhccc
Confidence 3344567777889999999997 66666667777887777666664 22357999999999999988774
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
.|.+++.++.+ |.+.|+++...++..+++..|+. .| ...+ ++++.+.++++ +.++++=.-
T Consensus 188 ~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~vQyP~~-~G~~~~d---~~~l~~~~h~~-~al~~v~aD------- 248 (450)
T COG0403 188 LGIEIEVVDAD-------DLDDLESADDGDVFGVLVQYPNT-FGIVEED---LRALIEAAHSA-GALVIVAAD------- 248 (450)
T ss_pred CceEEEEeccc-------hhhhhhhccccCeEEEEEecCCC-CCccchh---HHHHHHHHhhc-CCEEEEEec-------
Confidence 46777777653 77888888334788899888885 45 4444 99999999999 988874321
Q ss_pred CCCccccccCCCCCCceEEEeccccc---cccccceeEEEEcChhHHHHH----------------------------Hh
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKA---FAMTGWRLGYIAGPKHFVAAC----------------------------NK 207 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~---~g~~g~~~g~l~~~~~~~~~~----------------------------~~ 207 (352)
-....+...++.++-+|++++.... +|.+|..+||..+.+++.+++ ++
T Consensus 249 -plaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRR 327 (450)
T COG0403 249 -PLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRR 327 (450)
T ss_pred -hhHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhh
Confidence 1113344455567777999986443 465678899998888876663 22
Q ss_pred hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccC-CceecCCCCceE--EEeecCCccCCc
Q 018665 208 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE-GVKMSEPQGAFY--LFIDFSTYYGSE 284 (352)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-g~~~~~~~~g~~--~~~~~~~~~~~~ 284 (352)
....++.+++.... +.++++-..+.+...+.++..+..+...++.+.|++.. |+.+... .+| +.+++++.
T Consensus 328 eKATSNICTnQaLl-A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~---- 400 (450)
T COG0403 328 EKATSNICTNQALL-ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEE---- 400 (450)
T ss_pred hccchhhhHHHHHH-HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchh----
Confidence 22233344444333 33333332233588899999999999999999999662 4666543 443 34455431
Q ss_pred ccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 285 AEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 285 ~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
....+.++... .|+-+..- .+..+-+++.- +.++++.+++.+....
T Consensus 401 --------~~~~l~~~~~~-~G~~L~~~----~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 401 --------VAEALLAAAIA-GGINLRRV----DADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred --------HHHHHHHHHHh-cCCceeee----cCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 34455555443 36665432 24466666665 6799999999887653
No 379
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.36 E-value=7.9e-10 Score=104.61 Aligned_cols=242 Identities=14% Similarity=0.062 Sum_probs=150.4
Q ss_pred CCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCC------------------------
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPG------------------------ 60 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~------------------------ 60 (352)
..++...++ +.+.+++. ..|.+- .. =.+|+|||.|+..+++......
T Consensus 117 ~SP~~t~lE------~~vi~~la~l~G~~~-~~-G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n 188 (608)
T TIGR03811 117 SSPATSQME------EEVGKEFATLMGYKN-GW-GHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLN 188 (608)
T ss_pred cCchHHHHH------HHHHHHHHHHhCCCC-CC-eEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcc
Confidence 455566666 77777776 556542 23 3478999999987776542100
Q ss_pred ----------------------------------CEEEecCCCCCChHHHHHhcCC---eEEEecccCCCCcccCHHHHH
Q 018665 61 ----------------------------------DEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLE 103 (352)
Q Consensus 61 ----------------------------------~~vl~~~~~~~~~~~~~~~~g~---~v~~i~~~~~~~~~~d~~~l~ 103 (352)
.+++++...|.++..++...|+ +++.||++ .++.+|++.|+
T Consensus 189 ~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD--~~~rmd~~~L~ 266 (608)
T TIGR03811 189 MPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVD--SNYRMDINELE 266 (608)
T ss_pred cccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecC--CCCcCCHHHHH
Confidence 1588888889999999999999 58899987 45679999999
Q ss_pred hhccC----C--eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE--EEEecccccccc---cCC-CC-ccccc----
Q 018665 104 SKLTE----K--SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL--LVLSDEIYEHII---YAP-AT-HTSFA---- 166 (352)
Q Consensus 104 ~~l~~----~--~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~--~livD~~~~~~~---~~~-~~-~~~~~---- 166 (352)
+.+++ + +.+||.+..+..+|.+-|.+++.+|++.++++ |+ ++.||.||+++. +.. .. ..++.
T Consensus 267 ~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~-gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~ 345 (608)
T TIGR03811 267 KIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKE-GIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQE 345 (608)
T ss_pred HHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHc-CCceeEeeeccccchhhhhhccccccccccchhhc
Confidence 98853 2 33455555678999999944444444444788 87 699999999853 111 00 00000
Q ss_pred ---------------------cCCCCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhhhh--------------
Q 018665 167 ---------------------SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQS-------------- 210 (352)
Q Consensus 167 ---------------------~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~~~-------------- 210 (352)
.+.....-+-+..++||.+. ....+|.++.++. +.+.+.....
T Consensus 346 ~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g 424 (608)
T TIGR03811 346 VHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLG 424 (608)
T ss_pred ccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHHhcCcchhccccccCccccc
Confidence 00111223356778999986 5678888776544 3333321110
Q ss_pred ccccCCChHH--HHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc
Q 018665 211 QFTSGASSIS--QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 259 (352)
Q Consensus 211 ~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 259 (352)
.++...+.++ ...+..++..-....+.+.++.++.-+.++++.+.|++.
T Consensus 425 ~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 425 AYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111223223 223333333211146788888898888999999998873
No 380
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.28 E-value=2.3e-09 Score=94.02 Aligned_cols=266 Identities=15% Similarity=0.100 Sum_probs=167.4
Q ss_pred CEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 018665 61 DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 140 (352)
Q Consensus 61 ~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~ 140 (352)
+.+|+|+..|...-..+...|++|+.|+.++++ .+|+|.|++++.+++.++.+++|+.- |.. .+.+++|+++.++
T Consensus 158 ~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G--~VDlddLk~k~~~~~AalMiTnPsT~-GvF--E~~I~ei~~ivH~ 232 (496)
T COG1003 158 NICLIPDSAHGTNPASAAMAGFKVVVVKCDENG--NVDLDDLRAKAEDNLAALMITNPSTL-GVF--EEDIREICEIVHE 232 (496)
T ss_pred cEEEeeccccCCChhhHhhcCceEEEEecCCCC--CccHHHHHHHhccceeEEEeccCccc-ccc--hhhHHHHHHHHHH
Confidence 689999999998889999999999999998544 49999999999999999999999853 333 4559999999999
Q ss_pred CCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccc----cccceeEEEEcChhHHHHHHhh--------
Q 018665 141 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKI-------- 208 (352)
Q Consensus 141 ~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~g~l~~~~~~~~~~~~~-------- 208 (352)
+ |..+..|.+...-.. | ... +++.+-+++=..++|.|+ .+|.+.|=|.....+...+..-
T Consensus 233 ~-Gg~vY~DGANlNA~v-G-----~~r-PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~ 304 (496)
T COG1003 233 A-GGQVYYDGANLNAIV-G-----LAR-PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGE 304 (496)
T ss_pred c-CCEEEecCcchhhhh-c-----ccc-ccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCcc
Confidence 9 999999988654211 1 111 122344466667888873 3456677666555444433220
Q ss_pred -----------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC-CceEEEee
Q 018665 209 -----------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFID 276 (352)
Q Consensus 209 -----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~g~~~~~~ 276 (352)
.....+-.|......+...+.. ++.+.++..-+.---+..++..+|+..-.+.+.... ...=+.++
T Consensus 305 y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~--mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild 382 (496)
T COG1003 305 YRLDYDGKKSIGVSAAPYGSASILPIAWAYIRM--MGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILD 382 (496)
T ss_pred ccccCCCCccceeeccccCcchHHHHHHHHHHH--HhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEee
Confidence 0001111222233333333332 246667776666666788999999863122221111 11112222
Q ss_pred cCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-CCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 277 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-DDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.... .+..| .++.+++++|++ +|+.-..-++.- -.+.+=|=+.- +.+++|++++++.++.++...
T Consensus 383 ~r~l--~~~~G----v~~~DvAKrLlD-~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 383 ARPL--KKETG----VRALDVAKRLLD-YGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred chHh--HhhcC----CcHHHHHHHHHh-cCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2210 00111 278999999996 587643322110 24566665555 669999999999998887654
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.28 E-value=7.7e-10 Score=97.22 Aligned_cols=181 Identities=19% Similarity=0.161 Sum_probs=139.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEE-----ecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVI-----IPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK 109 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl-----~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~ 109 (352)
..+.+.++++.+.|+..+..++..++..|+ ++ +.+++..+.++..|++++.+... .......++.++.++
T Consensus 82 ~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ 156 (395)
T COG1921 82 GAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINEN 156 (395)
T ss_pred chhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-CCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccC
Confidence 468899999999999999999987554443 44 68888999999999999888643 336789999999999
Q ss_pred eeEEEEcCCCCC-cccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccc
Q 018665 110 SRLLILCSPSNP-TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 188 (352)
Q Consensus 110 ~~~i~i~~p~np-tG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 188 (352)
+++++-.+-+|- .-...+ .++++++|+++ |+++++|.+.+...... +.+..... .+-++++.|-.|.+|
T Consensus 157 ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~-~lpvivD~aSg~~v~~e---~~l~~~la-~GaDLV~~SgdKllg-- 226 (395)
T COG1921 157 TALLLKVHSSNYGFTGMLS---EEELVEIAHEK-GLPVIVDLASGALVDKE---PDLREALA-LGADLVSFSGDKLLG-- 226 (395)
T ss_pred CeeEEEEeecccccccccc---HHHHHHHHHHc-CCCEEEecCCccccccc---cchhHHHh-cCCCEEEEecchhcC--
Confidence 988775555442 222345 88899999999 99999999876543211 22222211 245599999999994
Q ss_pred cceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcc
Q 018665 189 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 189 g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
|.+.|.+++.+++++++++..............+++.++++.
T Consensus 227 GPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~ 268 (395)
T COG1921 227 GPQAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALEL 268 (395)
T ss_pred CCccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHH
Confidence 667999999999999999887777777888888888888876
No 382
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.17 E-value=1.2e-08 Score=99.77 Aligned_cols=279 Identities=11% Similarity=0.092 Sum_probs=182.1
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChHHHHH----hcC
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMAR----IAD 81 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~~~~~----~~g 81 (352)
....|+.++.|...++++.+ ++-.|--+-.++|.+-+.+.++. .++..+++++...|+.+...++ ..|
T Consensus 119 sQG~Lqal~e~Qtmi~~LtG-----m~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g 193 (954)
T PRK12566 119 AQGRLEALLNFQQMTIDLTG-----LDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFG 193 (954)
T ss_pred hhHHHHHHHHHHHHHHHHhC-----chhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCC
Confidence 55578888999999999997 55555555556665555444333 2234689999999998887665 456
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
++++. +.+++.+++++..+++.+|+. .|.+.+ +++|.+++++. |.++| +.+.- +.
T Consensus 194 ~~i~~-------------~~~~~~~~~~~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~-gal~~-~~~d~-la----- 248 (954)
T PRK12566 194 FELVV-------------DAVDNLAAHAVFGALLQYPDT-HGEIRD---LRPLIDQLHGQ-QALAC-VAADL-LS----- 248 (954)
T ss_pred cEEEE-------------cchhhcCCCCEEEEEEECCCC-ceEEcc---HHHHHHHHHHc-CCEEE-EEeCH-HH-----
Confidence 66653 223344555788888888875 577766 99999999999 98866 33311 11
Q ss_pred ccccccCCCCCCceEEEecc---ccccccccceeEEEEcChhHHHHHH----------------------------hhhh
Q 018665 162 HTSFASLPGMWERTLTVNGF---SKAFAMTGWRLGYIAGPKHFVAACN----------------------------KIQS 210 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~---sK~~g~~g~~~g~l~~~~~~~~~~~----------------------------~~~~ 210 (352)
..+...+++++-+|++++. +=-+|.+|...|++.+.+++.+.+. +...
T Consensus 249 -L~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKA 327 (954)
T PRK12566 249 -LLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKA 327 (954)
T ss_pred -HhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccc
Confidence 1223334556667888743 4445656778999999888777641 2222
Q ss_pred ccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE--EEeecCCccCCcccCC
Q 018665 211 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGF 288 (352)
Q Consensus 211 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~ 288 (352)
.++.+++....+.++.+... ..+.+.++++..++..+..++.+.|.+. |+++... .|| +.+++..
T Consensus 328 tSNICT~qaL~A~~a~~Y~~-~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~~~--~fF~~~~v~~~~--------- 394 (954)
T PRK12566 328 NSNICTAQVLLANIAGFYAV-YHGPEGLKRIAQRVHRLTAILAAGLEAK-GIKRLNR--HFFDTLTLEVGG--------- 394 (954)
T ss_pred cchhhHHHHHHHHHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHHHHhc-CCccccC--CccceEEEEccC---------
Confidence 33334444433333333322 2247889999999999999999999984 8887643 444 3334421
Q ss_pred CCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHH
Q 018665 289 GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 340 (352)
Q Consensus 289 ~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~ 340 (352)
.+.++.+...++ ||-++-- .++.+.||+.. +.+|++.++..+.
T Consensus 395 ----~~~~~~~~a~~~-~~n~r~~----~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 395 ----AQAAIIESAEAA-RINLRIL----GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred ----CHHHHHHHHHHC-CCeeEEe----CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 456676666654 7766542 35678888876 7899999999884
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.07 E-value=5.6e-08 Score=85.66 Aligned_cols=289 Identities=18% Similarity=0.164 Sum_probs=163.6
Q ss_pred CCcEEEeCChHH-HHHHHHHHhc--CCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCC-cccCHHHHHhhcc---C
Q 018665 36 PDQILVSNGAKQ-SILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN-FLLDPKVLESKLT---E 108 (352)
Q Consensus 36 ~~~i~~~~g~~~-a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~-~~~d~~~l~~~l~---~ 108 (352)
....++++-+|. ++...+.++. .+++.|+.+.-.+.+-..+....|.+++.+|...+++ ...|.+.+++.++ +
T Consensus 74 ~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~ 153 (389)
T PF05889_consen 74 VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGA 153 (389)
T ss_dssp HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCG
T ss_pred ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCC
Confidence 356777777766 4455555553 4568899999888888889999999999999653333 3456777777774 3
Q ss_pred CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc--CCCCccccccCCCCCCceEEEeccccccc
Q 018665 109 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFA 186 (352)
Q Consensus 109 ~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 186 (352)
++.+.++++++.-.+...+ ++++|+++|++| |++.++..||+-=.. -....... .. .-..+++-|..|.|
T Consensus 154 ~~iLcvltttscfapr~~D--~i~~IakiC~~~-~IPhlvNnAYgvQ~~~~~~~i~~a~-~~---GRvda~vqS~dkNF- 225 (389)
T PF05889_consen 154 DNILCVLTTTSCFAPRLPD--DIEEIAKICKEY-DIPHLVNNAYGVQSSKCMHLIQQAW-RV---GRVDAFVQSTDKNF- 225 (389)
T ss_dssp GGEEEEEEESSTTTTB------HHHHHHHHHHH-T--EEEEGTTTTT-HHHHHHHHHHH-HH---STCSEEEEEHHHHH-
T ss_pred CCeEEEEEecCccCCCCCc--cHHHHHHHHHHc-CCceEEccchhhhHHHHHHHHHHHH-hc---CCcceeeeecCCCE-
Confidence 6677788887655555543 599999999999 999999999874000 00000000 00 01227788999998
Q ss_pred cccceeEEEE-cChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc---CCc
Q 018665 187 MTGWRLGYIA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGV 262 (352)
Q Consensus 187 ~~g~~~g~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~ 262 (352)
+-+.+.+.+. .++..+..+........ ..++........+.. +...........++...++.++|++. -+-
T Consensus 226 ~VPvGgai~As~~~~~i~~vs~~YpGRa--s~sp~ld~~itLl~L---G~~g~~~ll~~r~~~f~~l~erl~~~aee~~e 300 (389)
T PF05889_consen 226 MVPVGGAIMASFDPSGILAVSKEYPGRA--SASPSLDLFITLLSL---GCTGYGALLKERKASFPYLKERLKKWAEEVGE 300 (389)
T ss_dssp CEESSHEEEEESSHHHHHHHHHTSHSHB--TSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred EecCCCcEEEecCHHHHHHHHHHhhhhh--hcccchHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2444445554 35567777654322111 233334445555544 23445555555555666666665542 133
Q ss_pred eec-CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE----eccCCCC-------CCCCeEEEEeec--C
Q 018665 263 KMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA----LVPGDAF-------GDDTCIRISYAA--S 328 (352)
Q Consensus 263 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~----i~~g~~~-------~~~~~iRi~~~~--~ 328 (352)
.+. .|.....+.+.++....... .+...+...|.++ ||. +.++... ++..|+-++.+. +
T Consensus 301 ~ll~~p~N~is~a~tl~~l~~~~~------k~~~~lgs~Lf~R-~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~ 373 (389)
T PF05889_consen 301 RLLETPRNHISMAFTLDTLYEISQ------KDGTFLGSMLFKR-GVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMT 373 (389)
T ss_dssp EBSSSTT-SSEEEEE-TTCCTCCS------SHHHHHHHHHHHT-TEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--
T ss_pred hhcCCCCCCeeEEEECccchhhcc------chhhhHHHHHHhC-CcccceeeccCCCcccccCCCCchHHHHHHHHhCCC
Confidence 333 23444445555554321000 1456888888877 554 2222111 123688886555 9
Q ss_pred HHHHHHHHHHHHHHHh
Q 018665 329 LTTLQAAVERIKKGLL 344 (352)
Q Consensus 329 ~~~l~~~~~~l~~~~~ 344 (352)
+||++.++++|+++++
T Consensus 374 ~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 374 REEVDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999874
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.00 E-value=1.5e-07 Score=82.50 Aligned_cols=304 Identities=16% Similarity=0.172 Sum_probs=172.8
Q ss_pred hcCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-----CEEEec-CCCCCChHHHHHhcC---CeEEEecccCC
Q 018665 29 ENGLSYTPDQILVSNGAKQSILQAVLAVCS-------PG-----DEVIIP-APFWVSYPEMARIAD---ATPVILPTRIS 92 (352)
Q Consensus 29 ~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~~-----~~vl~~-~~~~~~~~~~~~~~g---~~v~~i~~~~~ 92 (352)
-.||+...+.|+--.|+.+.+..+.-+-.+ .| +-|+.. .-+|.+...++...| -+++.|+.+
T Consensus 153 ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~-- 230 (510)
T KOG0629|consen 153 IVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTD-- 230 (510)
T ss_pred HhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEeccc--
Confidence 557766656776655555555443333211 11 334433 468889999999998 577777776
Q ss_pred CCcccCHHHHHhhccC---C---eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 93 ENFLLDPKVLESKLTE---K---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~---~---~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
.....++++|++.+.. + |-.+..+.-+..-|..-| +..++++|++| ++++.||.++++...-...+..
T Consensus 231 e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~-~lWmHvDAAwGGglLmS~k~R~-- 304 (510)
T KOG0629|consen 231 ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKH-KLWMHVDAAWGGGLLMSRKHRH-- 304 (510)
T ss_pred ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhc-CEEEEeecccccccccChhhHh--
Confidence 4456999999998842 2 233333333567777778 99999999999 9999999999873332222221
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhhhhccc-----------cCCChHHHHH-------HHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQFT-----------SGASSISQKA-------GVAA 227 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~-------~~~~ 227 (352)
.+.....-.-+.++.+|..| +.+.++..+.+.+ ++.+..+....+- -+..-..|-. ...+
T Consensus 305 kl~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlm 383 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLM 383 (510)
T ss_pred hccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHH
Confidence 11111112256788999998 7788887766553 4444432221110 0111111111 1112
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec-C--CCCceEEEeecCCccC---CcccCCCCC-CChHHHHHH
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-E--PQGAFYLFIDFSTYYG---SEAEGFGKI-ENSESLCRY 300 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~--~~~g~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~ 300 (352)
+.. .+...++...+++-++.+++.+++++.++...+ . |+...+.+-..|.... ..++.+..- .-+..+-.+
T Consensus 384 wka--KG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~ 461 (510)
T KOG0629|consen 384 WKA--KGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKER 461 (510)
T ss_pred HHh--cccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHH
Confidence 221 124667888899999999999999998775444 2 4423322222222111 111111100 013345566
Q ss_pred HHHccCEEeccCCCCC-CCCeEEEEeec---CHHHHHHHHHHHHHHHh
Q 018665 301 LLDKAQVALVPGDAFG-DDTCIRISYAA---SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~-~~~~iRi~~~~---~~~~l~~~~~~l~~~~~ 344 (352)
+.++ |.....-...+ .++.+|+.+.. +++|++-+++.|...-+
T Consensus 462 Mm~~-Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 462 MMKK-GTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred HHhc-cceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 6655 43322211111 25688987765 77899999988877654
No 385
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.99 E-value=8.8e-10 Score=96.07 Aligned_cols=215 Identities=20% Similarity=0.186 Sum_probs=60.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCC------CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP------FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~------~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~ 108 (352)
..+.-+++++..+|+..++.+++. +.+|++... .-+..-+..+..|.+++.+-.- ....++++++++.+
T Consensus 61 gAeaA~VvNnnaAAv~L~l~~la~-~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI~e 135 (367)
T PF03841_consen 61 GAEAALVVNNNAAAVLLALNTLAK-GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAITE 135 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc----cccccccccccccc
Confidence 466778888888999988888865 446665543 2223556788899998887643 33578899999999
Q ss_pred CeeEEEEcCCCCC--cccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc----CCCCccccccCCCCCCceEEEeccc
Q 018665 109 KSRLLILCSPSNP--TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY----APATHTSFASLPGMWERTLTVNGFS 182 (352)
Q Consensus 109 ~~~~i~i~~p~np--tG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~s 182 (352)
++.+++-.+++|- .|..-.. .++++++++++| |+++|+|...+.+.. .-...+++..... .+-+++++|-.
T Consensus 136 ~Ta~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~-~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~-~GaDlV~fSGd 212 (367)
T PF03841_consen 136 NTAALLKVHTSNFRIQGFTGEV-SLEELAELAKEH-GLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA-AGADLVTFSGD 212 (367)
T ss_dssp --------------------------HHHHHHHHH-T--EEEE-TTHHHHHHHTT----------CCC-CT-SEEEEETT
T ss_pred cccccccccccccccccccccc-cHHHHHHHHhhc-CCcEEEECCCCCCcCcccccCccccHHHHHhh-cCCCEEEEECC
Confidence 9999988887663 3333211 299999999999 999999988743211 0011233333322 35669999999
Q ss_pred cccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCCh---------HHHHHHHHHHHHHHHHHH
Q 018665 183 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG---------EVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 183 K~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~l~ 253 (352)
|.+| |...|.+++.+++++++++..............+++.+++......+ ..+....+.++++.+.+.
T Consensus 213 KlLG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~ 290 (367)
T PF03841_consen 213 KLLG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLA 290 (367)
T ss_dssp SSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------
T ss_pred CcCC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccc
Confidence 9996 45689999999999999887666667788888888888887633111 113333445566666666
Q ss_pred HHhccc
Q 018665 254 KSFGEL 259 (352)
Q Consensus 254 ~~l~~~ 259 (352)
..|+..
T Consensus 291 ~~l~~~ 296 (367)
T PF03841_consen 291 AQLKAA 296 (367)
T ss_dssp ------
T ss_pred cccccc
Confidence 666654
No 386
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.98 E-value=4.8e-08 Score=83.55 Aligned_cols=215 Identities=16% Similarity=0.101 Sum_probs=125.3
Q ss_pred CHHHHHhhcc-----CCee-EEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc-ccccCC
Q 018665 98 DPKVLESKLT-----EKSR-LLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLP 169 (352)
Q Consensus 98 d~~~l~~~l~-----~~~~-~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~-~~~~~~ 169 (352)
.++++++.+. +.+. ++|+..-++..|- ..++++.+.|.+++++| ++.+|+||++.+.+.+|+.+. ..+.+.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh-~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-GVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc-CeEEEeeeeecCCCccCceeeehhcCCC
Confidence 3666777663 2344 4555555777774 46889999999999999 999999999998777665321 111122
Q ss_pred CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 249 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (352)
. + .-+.+|||-+- .| || ..+++++.. +.++.+.++...+.-...+...++. ..-+.+.+..+..-
T Consensus 333 ~--P--pD~vTFSKK~q-~g---Gf-fh~~~frpn-~pYrifNTWmGdP~k~lll~~vv~~-----I~~~~Ll~n~~~vG 397 (484)
T KOG1405|consen 333 S--P--PDVVTFSKKFQ-TG---GF-FHDEEFRPN-EPYRIFNTWMGDPSKNLLLEEVVQE-----IKREDLLNNVAHVG 397 (484)
T ss_pred C--C--ccceehhhhhh-cC---cc-ccCcccCCC-chHHHhhhhcCChHHHHHHHHHHHH-----HhHHHHHHHHHHHH
Confidence 1 1 23667888884 33 44 344444332 1222233344444444444455443 12233344444444
Q ss_pred HHHHHHhcc----cCC-ceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEE
Q 018665 250 DFLVKSFGE----LEG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 324 (352)
Q Consensus 250 ~~l~~~l~~----~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~ 324 (352)
+.+...|.+ .|+ +.-+.. .|.|+..++|... --+.+...+. .+|+-+. +|+ ...+|+-
T Consensus 398 ~~l~~gL~~Lq~~~p~~~~~~RG-rGTF~a~d~ps~~-----------~Rdk~i~~~~-~nGv~~G---GCg-~~siRfR 460 (484)
T KOG1405|consen 398 KALLKGLLELQAKYPGKINNLRG-RGTFIAWDCPSGS-----------IRDKLILIAR-LNGVNLG---GCG-DKSIRFR 460 (484)
T ss_pred HHHHHHHHHHHHhCchhhhcccc-cceEEEEeCCChH-----------HHHHHHHHHH-HcCceec---ccc-cceeeec
Confidence 555555443 344 333344 5666778888752 3455665555 4588763 233 4455655
Q ss_pred eec--CHHHHHHHHHHHHHHHhh
Q 018665 325 YAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 325 ~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
++. .+...+-+++++.+.+..
T Consensus 461 PsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 461 PSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred cceeehhhhHHHHHHHHHHHhcc
Confidence 544 778889999999988764
No 387
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.92 E-value=4.2e-07 Score=76.22 Aligned_cols=171 Identities=15% Similarity=0.229 Sum_probs=119.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC-CCCCChH----------HHHHhcCCeEEEecc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYP----------EMARIADATPVILPT 89 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~-~~~~~~~----------~~~~~~g~~v~~i~~ 89 (352)
+..|+-++ .+...-...+. |+|+|+..++..++++||+++.-. .-|..+. ..++.+|+....+|+
T Consensus 72 ~vyA~vf~---aE~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~L 147 (416)
T COG4100 72 RVYAQVFG---AEAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPL 147 (416)
T ss_pred HHHHHHhc---cccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeeccc
Confidence 77777775 11111233333 567999999999999999987443 3343332 456788899999998
Q ss_pred cCCCCcccCHHHHHhhccCCeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHh-CCCEEEEecccccccccCCCCcccccc
Q 018665 90 RISENFLLDPKVLESKLTEKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTSFAS 167 (352)
Q Consensus 90 ~~~~~~~~d~~~l~~~l~~~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~-~~~~~livD~~~~~~~~~~~~~~~~~~ 167 (352)
.. +..+|.+.+.+.+++++++|-+--. .+..--.++.+++++++++.+. +||++++||++|++|.- ...+.-
T Consensus 148 t~--~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE--~~EPt~-- 221 (416)
T COG4100 148 TA--DGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVE--EKEPTH-- 221 (416)
T ss_pred cc--CCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhh--ccCccc--
Confidence 74 4459999999999999998876433 2211123677789999998875 47999999999998752 221221
Q ss_pred CCCCCCceEEEeccccccccccc--eeEEEEcChhHHHHHH
Q 018665 168 LPGMWERTLTVNGFSKAFAMTGW--RLGYIAGPKHFVAACN 206 (352)
Q Consensus 168 ~~~~~~~~i~~~s~sK~~g~~g~--~~g~l~~~~~~~~~~~ 206 (352)
-+-++..+|+-|..| +|+ -.||+.+..++++...
T Consensus 222 ----vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 222 ----VGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred ----cchhhhccceeeCCC-CceeeccceeechHHHHHhhc
Confidence 234478899999987 554 3688999999998753
No 388
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.88 E-value=6.6e-09 Score=81.07 Aligned_cols=65 Identities=20% Similarity=0.504 Sum_probs=59.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS 72 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~--~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~ 72 (352)
..|.+..|..++| +++|+++. ++| +.+++++|++|+|+++++..++.+++++||.|++++|+|..
T Consensus 86 a~Y~~~~G~~~lR------~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 86 ALFQDYHGLANFR------KAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred hcCCCCCCcHHHH------HHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 3588899999999 99999998 777 66789999999999999999999999999999999999963
No 389
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.70 E-value=4.1e-06 Score=72.74 Aligned_cols=286 Identities=10% Similarity=0.098 Sum_probs=162.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH-HHHHhcCCeEEEeccc-CCCCcc--
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTR-ISENFL-- 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~-~~~~~~g~~v~~i~~~-~~~~~~-- 96 (352)
+.+.+.+ +++-+-+=+++..|+|..+..+.+.|+.+...-.+....|.... .-++..+..+...... ...++.
T Consensus 57 ~~lreLl---~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~i 133 (365)
T COG1932 57 KDLRELL---NIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSI 133 (365)
T ss_pred HHHHHHh---CCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCC
Confidence 4444444 33322233456677888888888888765433123333333322 2334444322222221 122222
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.+++++. +.++...|.+|.-..-+|.-.+. ...+ . ++.++++|.+...++. +..+.. -.+
T Consensus 134 P~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~--~p~~-----~-~~~~~v~D~SS~ilsr----~iDvsk------~dv 193 (365)
T COG1932 134 PDLSKWD--FSDNDAYVHFCWNETISGVEVPE--LPDI-----G-SDGLLVADASSAILSR----PIDVSK------YDV 193 (365)
T ss_pred CChhhcc--cCCCccEEEEecCCcccceEccC--CCCC-----C-CCceEEEecccHHhcC----CCChhH------cce
Confidence 3444333 33344446666555667777651 1111 1 1477888987655431 222222 227
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHhhh-------------hccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
+..+..|.+|..| ++.++.+++++++++... ....-+|+.+..+.....++=.. ....++.+.+
T Consensus 194 iyagaQKnlGpaG--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk-~~GGl~~~~~ 270 (365)
T COG1932 194 IYAGAQKNLGPAG--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLK-SQGGLEALEA 270 (365)
T ss_pred EEEehhhccCccc--eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHH-HcCCHHHHHH
Confidence 7888999998667 899999999998876531 11112455555554444443110 1244677778
Q ss_pred HHHHHHHHHHHHhcccCCceec---CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCe
Q 018665 244 AFRERRDFLVKSFGELEGVKMS---EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 320 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~ 320 (352)
+-++..+.|.+.+.+.+..... ..++-+.+.+.+.+. +-...+.+.+.++ |+...-| ....+.
T Consensus 271 rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~-----------~ld~~fv~eae~~-gl~~lkG--hr~vgG 336 (365)
T COG1932 271 RNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDA-----------ELDKGFVAEAEAA-GLIYLKG--HRSVGG 336 (365)
T ss_pred HHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCcH-----------HHHHHHHHHHHHc-CCceecc--ccCCCc
Confidence 8888888888888876222211 334455566666543 1356677777766 5655555 344566
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 321 IRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 321 iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+|+|+.. +-|+++.+++.++.+.++.
T Consensus 337 mRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 337 LRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred eeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 9999977 8899999999999988764
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.67 E-value=3.1e-06 Score=71.35 Aligned_cols=281 Identities=12% Similarity=0.087 Sum_probs=169.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC---CEEEecCCCCCChH----HHHHhcCCeE----EEecccCCCCcccCHHHH
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPG---DEVIIPAPFWVSYP----EMARIADATP----VILPTRISENFLLDPKVL 102 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~---~~vl~~~~~~~~~~----~~~~~~g~~v----~~i~~~~~~~~~~d~~~l 102 (352)
...++|.+.++-|-.+..++.++.++. -+|+++.-.|++-. ..++..|..+ +.+...+ +.-.+..+.+
T Consensus 126 A~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePRE-GEetlRteDI 204 (465)
T KOG3846|consen 126 AQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPRE-GEETLRTEDI 204 (465)
T ss_pred CCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccc-cccchhHHHH
Confidence 567889999999999999999998765 46888887776644 4555566543 2232221 2222556666
Q ss_pred Hhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEe
Q 018665 103 ESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 179 (352)
Q Consensus 103 ~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 179 (352)
.+.+. +..++|+.+..+.-||+.++ +.+|-..-+.. |+++=.|-+|.. |. .++ ...+|+.++-++
T Consensus 205 Ld~IEkngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~k-gc~VGfDLAHAv----gN--VpL--~LHdWgVDFACW 272 (465)
T KOG3846|consen 205 LDTIEKNGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFK-GCLVGFDLAHAV----GN--VPL--QLHDWGVDFACW 272 (465)
T ss_pred HHHHHhcCCeEEEEEeecceeecccccc---hhhhhhcccCC-CcEechhhhhhh----cC--Cce--EEeecCCceEEE
Confidence 66664 35566778889999999999 77777544455 999988888764 22 111 123478888999
Q ss_pred ccccccccccceeEEEEcChhHHHHH-Hhhhh------------------------ccccCCChHHHHHHHHHhcccCCC
Q 018665 180 GFSKAFAMTGWRLGYIAGPKHFVAAC-NKIQS------------------------QFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 180 s~sK~~g~~g~~~g~l~~~~~~~~~~-~~~~~------------------------~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
...|.++.+.-++|.+...+++.... .+... +....|+.....++...++. ..
T Consensus 273 CSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~--F~ 350 (465)
T KOG3846|consen 273 CSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLEL--FA 350 (465)
T ss_pred eeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHH--HH
Confidence 99999852323566666655433221 11111 11123344444444444432 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccc-----------CCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHH
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGEL-----------EGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCR 299 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~-----------~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
.-.+.+++++.--...++...++.. +.+.++.|. .|..+.+.++. ....+.+
T Consensus 351 q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-------------p~~~vfq 417 (465)
T KOG3846|consen 351 QFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-------------PTPKVFQ 417 (465)
T ss_pred HhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-------------CchHHHH
Confidence 1123344443333333333333221 123344332 35555555543 5678889
Q ss_pred HHHHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHHHhhhC
Q 018665 300 YLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 300 ~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~~ 347 (352)
+|.++ |+..-. ..++.+|+.+.. +-.|+.+++..|.+++..+.
T Consensus 418 eL~kr-Gv~~Dk----R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 418 ELHKR-GVIGDK----RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred HHHHc-Ceeccc----cCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 99987 887543 358999999877 77999999999999987653
No 391
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.67 E-value=8.9e-06 Score=72.40 Aligned_cols=259 Identities=14% Similarity=0.078 Sum_probs=151.6
Q ss_pred EEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCee-----EEEEcCCCCCcccCCCHHHHHHHHHH
Q 018665 63 VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR-----LLILCSPSNPTGSVYPKNLLDEIARI 137 (352)
Q Consensus 63 vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~-----~i~i~~p~nptG~~~~~~~l~~l~~~ 137 (352)
+...+-.|.+...++...+++.+.++.+. ++.++.+.|++++.++.. .+++.+. .|..+...+.+.+|..+
T Consensus 185 ~Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~--GTT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 185 AYCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL--GTTSSCAFDELEELGPV 260 (511)
T ss_pred EEecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee--cCccccccccHHHhcch
Confidence 44567788888899999999999999874 788999999999965321 2233332 22333445569999999
Q ss_pred HHhCCCEEEEecccccccccCCCCccccccCCC-CCCceEEEeccccccccccceeEEEE------------cChhHHHH
Q 018665 138 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIA------------GPKHFVAA 204 (352)
Q Consensus 138 ~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~~~g~l~------------~~~~~~~~ 204 (352)
|+++ ++++.||++|.+..+. .+.+..+.. -..-.-+....||++- .-+.+..+. +++-.++.
T Consensus 261 c~~~-glWLHVDAAYAGsa~i---CpE~r~l~rGie~aDSfn~n~hK~~~-vnfDCs~lWvkd~~~~~~~~~vdp~yL~h 335 (511)
T KOG0628|consen 261 CREE-GLWLHVDAAYAGSAFI---CPEFRYLMRGIEYADSFNFNPHKWLL-VNFDCSPLWVKDGTKLSRAFNVDPLYLKH 335 (511)
T ss_pred hhhc-CEEEEeehhhcccccc---CHHHHHHhhcchhhccccCChhheeE-EeeeeecceeecCceeeeeeecChHhhcc
Confidence 9999 9999999999864321 122222110 0000112233444431 111112111 22222221
Q ss_pred HH--------hhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEee
Q 018665 205 CN--------KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 276 (352)
Q Consensus 205 ~~--------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~ 276 (352)
-. .++-..+-..-++-.....+.+ +.+.+++..++.-+..+.+.+.+.+-+.+++..+..--.+.++
T Consensus 336 ~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~-----Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFR 410 (511)
T KOG0628|consen 336 AYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSY-----GVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFR 410 (511)
T ss_pred hhhccCCCccccccccccchhhHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEe
Confidence 11 0000000111111222222222 2455555555556666667777776667888765543335556
Q ss_pred cCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHHHhhh
Q 018665 277 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~ 346 (352)
+.+.- +..+.+.+++.....|.+.|.+. ...-.+|++++. ++++++++.+.|.+....+
T Consensus 411 lk~~N----------~~ne~Ll~~in~~g~i~l~~~~l-~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 411 LKGDN----------EINEALLNRLNSSGRIHLVPASL-HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred ecCCc----------HHHHHHHHHHHhcCcEEEEEeee-cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 54421 15788999999888899988643 234478999987 7789999999999888764
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.38 E-value=0.00014 Score=67.53 Aligned_cols=310 Identities=15% Similarity=0.147 Sum_probs=172.3
Q ss_pred hhccchhhHHHHHHHHhcCCCCCCCcEEEeCCh-HHH---HHHHHHHh-cCCC----CEEEecCCCCCChHHHHHhcCCe
Q 018665 13 MRVLWSFVQQFVINLKENGLSYTPDQILVSNGA-KQS---ILQAVLAV-CSPG----DEVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 13 l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~-~~a---~~~~~~~l-~~~~----~~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
+.|.|.|.+.+.++-....-...-+.+-+.+++ .++ -..++++. ..+| ..-++|...|...-..++..|.+
T Consensus 574 ~eQaqGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmk 653 (1001)
T KOG2040|consen 574 VEQAQGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMK 653 (1001)
T ss_pred hHHHhhHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCE
Confidence 334445555554443322212345666665332 222 22344443 3333 34678888998888899999999
Q ss_pred EEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 84 PVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|+.+..+..+ .+|..+|.+... ++-.++.+..|+.- |.. .+.+++++++.+++ |.-+..|.+...-
T Consensus 654 vvpV~~~~~G--~id~~dLk~kaekh~~~Laa~MvTYPST~-Gvf--E~~i~d~cd~iHeh-GGQVYlDGANMNA----- 722 (1001)
T KOG2040|consen 654 VVPVGCDANG--NIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVF--EEGIDDICDIIHEH-GGQVYLDGANMNA----- 722 (1001)
T ss_pred EEEeeccCCC--CccHHHHHHHHHHhhhhhheeEEeccccc-ccc--cccHHHHHHHHHhc-CCEEEecCCCccc-----
Confidence 9999987444 489999988774 46678888888643 332 23399999999999 9999999886531
Q ss_pred CccccccCCCCCCceEEEecccccccc----ccceeEEEEcChhHHHHHHhhhhc-----------cccC----CChHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVAACNKIQSQ-----------FTSG----ASSISQ 221 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~g~l~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~ 221 (352)
...+.. +++.+.+++=..++|.|+. +|.++|=+.....+...+....-. .+.+ .|....
T Consensus 723 -qVGlc~-pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~IL 800 (1001)
T KOG2040|consen 723 -QVGLCR-PGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALIL 800 (1001)
T ss_pred -eecccC-CccccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceee
Confidence 111121 1224445666677888743 355566665544444433211100 0000 111111
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE---EEeecCCccCCcccCCCCCCChHHHH
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY---LFIDFSTYYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
....+.+.. ++...+...-+.---+..++.++|+..-.+-+.. ..|.. +.+++.+.. +..|. ++.+++
T Consensus 801 pISwaYikm--MG~~GL~~as~~AiLNaNYMakRLe~hYkil~~~-~~~~vaHEFIlD~r~fK--~~agi----eavDvA 871 (1001)
T KOG2040|consen 801 PISWAYIKM--MGSGGLKDASKIAILNANYMAKRLESHYKILFRG-ENGLVAHEFILDLRPFK--KTAGI----EAVDVA 871 (1001)
T ss_pred hhHHHHHHH--hcccccchhhHHHhhhhHHHHHHHhhccceeEec-CCcceeeeeeeechhhc--cccCC----cHHHHH
Confidence 122222221 1233343333333446678888888742333322 22221 223443321 11222 788999
Q ss_pred HHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 299 RYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
++|.+ +|+.-...++. -++++=|-+.. +.+|+|++++++-.+-++.
T Consensus 872 KRL~D-YgFHaPTmswP-V~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 872 KRLMD-YGFHAPTMSWP-VAGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred HHHHh-ccCCCCccccc-cCCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 99885 68765444332 45777776666 5589999998876555443
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.11 E-value=0.00032 Score=65.32 Aligned_cols=279 Identities=11% Similarity=0.140 Sum_probs=159.5
Q ss_pred hhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHh----cCCeEE
Q 018665 11 LQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARI----ADATPV 85 (352)
Q Consensus 11 ~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~----~g~~v~ 85 (352)
..|.-+.-|...+++.-+ ++-.+--+-.-+|.|-+....+. ..++.+.++...+|+.....++. +|++++
T Consensus 160 GRLEsllNyQTmi~dlTG-----L~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~ 234 (1001)
T KOG2040|consen 160 GRLESLLNYQTMITDLTG-----LPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVV 234 (1001)
T ss_pred hhHHHHhhhHHhhhhccC-----CcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEE
Confidence 345545556777777765 44344333344444444443332 34556799999999999887764 344433
Q ss_pred EecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 86 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.. |+.+.- ...++...+++-.|.. .|.+.+ ..++++.+++. +.++++-- ++ ....+
T Consensus 235 ~~----------~~~~~~-~s~~~v~gvlvQYP~t-~G~i~d---~~el~~~a~~~-~s~vv~at---DL-----LaLti 290 (1001)
T KOG2040|consen 235 VS----------DIKEAD-YSSKDVSGVLVQYPDT-EGSVLD---FDELVELAHAN-GSLVVMAT---DL-----LALTI 290 (1001)
T ss_pred ec----------CHHHhh-ccccceeEEEEEcCCC-CCcccC---HHHHHHHhhcc-CceEEEee---hh-----hHHHc
Confidence 32 222221 1223566666655543 578888 88888888888 87766321 10 11233
Q ss_pred ccCCCCCCceEEEeccccc---cccccceeEEEEcChhHHHHHH----------------------------hhhhcccc
Q 018665 166 ASLPGMWERTLTVNGFSKA---FAMTGWRLGYIAGPKHFVAACN----------------------------KIQSQFTS 214 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~---~g~~g~~~g~l~~~~~~~~~~~----------------------------~~~~~~~~ 214 (352)
...+++++-+|.++|.... +|.+|...||..+.+++.+.+. +-....+.
T Consensus 291 LrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNI 370 (1001)
T KOG2040|consen 291 LRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNI 370 (1001)
T ss_pred cCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhh
Confidence 3445557777999986443 4545555666555555444321 11111111
Q ss_pred CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEE--eecCCccCCcccCCCCCC
Q 018665 215 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIE 292 (352)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~ 292 (352)
.+.....+-..+++.. .-+.+.++++.+++......+...|++. |-++... .||=. +++..
T Consensus 371 CTAQALLANmaAmyai-YHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k--~fFDTLkI~~~~------------- 433 (1001)
T KOG2040|consen 371 CTAQALLANMAAMYAI-YHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHK--PFFDTLKIRCGC------------- 433 (1001)
T ss_pred hHHHHHHHHHHHHHhh-hcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccc--cccceEEEEecC-------------
Confidence 1111111111122221 1147889999999999999999999986 6555432 25533 34432
Q ss_pred ChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHH
Q 018665 293 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 340 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~ 340 (352)
..+++.++..++ +|-++. ..++.+-+++.. +++|++.++..+.
T Consensus 434 s~~~~l~rA~~~-~iNlr~----~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 434 SAEEVLDRAAKR-QINLRL----VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred cHHHHHHHHHhh-cCceEE----eecCceEEeecccccHHHHHHHHHHHc
Confidence 577777777765 444332 257888888876 7789999988775
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.22 E-value=0.0018 Score=53.99 Aligned_cols=158 Identities=17% Similarity=0.127 Sum_probs=83.2
Q ss_pred cCCCCCChHHHHHhcCCeEEEecccCCCC-cccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 018665 66 PAPFWVSYPEMARIADATPVILPTRISEN-FLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 143 (352)
Q Consensus 66 ~~~~~~~~~~~~~~~g~~v~~i~~~~~~~-~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~ 143 (352)
+.-.-.+.....-..|++++.++--.+++ ..-|++.+++.+.+ ....|.+.+.....=.+-+++.+++|+.+|..| +
T Consensus 109 ~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~-d 187 (432)
T KOG3843|consen 109 LRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAH-D 187 (432)
T ss_pred EecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHcc-C
Confidence 33333344455557788887776543332 33477777777753 344333333322222334566799999999999 9
Q ss_pred EEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEE--cChhHHHHHHhhhhccccCCChHHH
Q 018665 144 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA--GPKHFVAACNKIQSQFTSGASSISQ 221 (352)
Q Consensus 144 ~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~--~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
++-||..+|+--.- ...+...... .-...+.++.|+.|.|-.| . .|.++ .+..++..+.+...... .+++..
T Consensus 188 iphivnnayglqse-e~i~~iaa~~-~~grida~vqsldknf~vp-v-ggaiia~fk~n~iq~iak~ypgra--sa~ps~ 261 (432)
T KOG3843|consen 188 IPHIVNNAYGLQSE-ECIHKIAAAA-ECGRIDAFVQSLDKNFMVP-V-GGAIIAAFKDNFIQEIAKMYPGRA--SASPSL 261 (432)
T ss_pred chhhhccccccchH-HHHHHHHHHh-hhccHHHHHHHhhhcceee-c-chhHhhHhHHHHHHHHHHhCCCcc--ccCccH
Confidence 99999999874110 0000111100 0012235678888988433 1 13333 25566666655432222 233333
Q ss_pred HHHHHHhcc
Q 018665 222 KAGVAALGL 230 (352)
Q Consensus 222 ~~~~~~l~~ 230 (352)
..+...+..
T Consensus 262 dllitll~~ 270 (432)
T KOG3843|consen 262 DLLITLLSL 270 (432)
T ss_pred HHHHHHHHh
Confidence 444444444
No 395
>PLN02672 methionine S-methyltransferase
Probab=96.34 E-value=0.083 Score=54.08 Aligned_cols=185 Identities=10% Similarity=0.136 Sum_probs=110.9
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHh------cCCCCEEEecCCCCCChHHH
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAV------CSPGDEVIIPAPFWVSYPEM 76 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l------~~~~~~vl~~~~~~~~~~~~ 76 (352)
|.++.|...+| ..||.|+. -+++++.+++|++.++-..|++.+++.+ ++.+ ++..-...|...
T Consensus 422 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 491 (1082)
T PLN02672 422 CEPPAGSKRFR------NLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEH----LTRWLPKKWLTS 491 (1082)
T ss_pred CCCCccchHHH------HHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhh----hhccCCHHHHhH
Confidence 67788999999 99999999 8899999999999999999998888764 2222 222222234444
Q ss_pred HHhcC--------CeEEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 77 ARIAD--------ATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 77 ~~~~g--------~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+...| -.+..+..+... +.+.+.+++ ++..|+..-... -..+....+.|.+.+++. |..++
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~ 561 (1082)
T PLN02672 492 LAIENATSDSKSDDVITVIEAPRQS------DLVIELIKKLKPQVVVTGMADF---EMRTSTAFEHLLNVTAEI-GARLF 561 (1082)
T ss_pred hhhhcccccCccCCeEEEEeCCCcc------hHHHHHHHhCCCeEEEEeccch---hhhhHHHHHHHHHHHHhh-CcEEE
Confidence 44332 344444433222 233444432 555555433332 223344589999999999 99999
Q ss_pred ecccccc-cccCCCCccccccCC--CCCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhh
Q 018665 148 SDEIYEH-IIYAPATHTSFASLP--GMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKI 208 (352)
Q Consensus 148 vD~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~ 208 (352)
.|..... +.-......-+..+. ..+.+..++-.+-|.--.+.+-+.+++.- +.+...+.+.
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (1082)
T PLN02672 562 LDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKT 626 (1082)
T ss_pred EehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHH
Confidence 9987432 111111111111111 11234445555667665588899998854 4455555443
No 396
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=93.02 E-value=3.3 Score=35.53 Aligned_cols=272 Identities=12% Similarity=0.092 Sum_probs=142.0
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCC---EEEecCCCCCChHHHHHhcCCe-EEEecccCCC-CcccCHHHHHhhccCC
Q 018665 37 DQILVSNGAKQSILQAVLAVC--SPGD---EVIIPAPFWVSYPEMARIADAT-PVILPTRISE-NFLLDPKVLESKLTEK 109 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~--~~~~---~vl~~~~~~~~~~~~~~~~g~~-v~~i~~~~~~-~~~~d~~~l~~~l~~~ 109 (352)
+=+++..|+|+-+..+...|. +.|+ =|+.-...-..+. -+++.|.. .+..+..... +-..|.+.++. +++
T Consensus 72 ~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~-EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~d 148 (370)
T KOG2790|consen 72 KVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAE-EAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPD 148 (370)
T ss_pred eEEEEeCCCcccccccchhhhccccCCccceEEeccccHHHHH-HHHhhCCceEEeccccccccCcCCChhhccc--CCC
Confidence 345777888887777766665 3332 2222222222222 33344433 3333333211 11245554443 234
Q ss_pred eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc
Q 018665 110 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 189 (352)
Q Consensus 110 ~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 189 (352)
.+.+++|.--...|.-++. +- .-... +.+++.|-+.-.+. .+..+. .--++++...|.+|.+|
T Consensus 149 a~yvyyCaNETVHGVEf~~-----~P-~~~~~-~~vlVaDmSSnflS----rpvDvs------k~gvi~aGAQKN~G~aG 211 (370)
T KOG2790|consen 149 ASYVYYCANETVHGVEFDF-----IP-VNDPK-GAVLVADMSSNFLS----RPVDVS------KFGVIFAGAQKNVGPAG 211 (370)
T ss_pred ccEEEEecCceeeceecCC-----CC-CCCCC-CceEEEecccchhc----CCccch------hcceEEeccccccCccc
Confidence 4567766655555665541 10 01133 78888887654432 111221 12266777889998776
Q ss_pred ceeEEEEcChhHHHHHHhhh------------hccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 018665 190 WRLGYIAGPKHFVAACNKIQ------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 257 (352)
Q Consensus 190 ~~~g~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 257 (352)
+-.++.+++++....... ..-.-+++.+..++.-..++... ....+..+.+.-.+....+.+.+.
T Consensus 212 --~Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il-~~GGl~a~e~~n~~KskllYd~iD 288 (370)
T KOG2790|consen 212 --VTVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWIL-EKGGLAAMEKLNQEKSKLLYDAID 288 (370)
T ss_pred --cEEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHH-hcccHHHHHHHHHHHHHHHHHHHH
Confidence 455666766655432211 01112455555555444444211 134466666666777788888888
Q ss_pred ccCCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHH
Q 018665 258 ELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTT 331 (352)
Q Consensus 258 ~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~ 331 (352)
+..|+...+-. +-+.+.+++.+- +-..++.+...+++=+.+ .+...-+.+|-|+-- +-++
T Consensus 289 ~s~gfy~cpVe~~~RS~MNV~Fri~~d-----------~Le~eFLkeA~~~~mv~L---KGhRSVGGiRASlYNAisv~~ 354 (370)
T KOG2790|consen 289 NSNGFYRCPVEPSVRSRMNVPFRIEKD-----------ELEAEFLKEAAKEHMVQL---KGHRSVGGIRASLYNAISVEE 354 (370)
T ss_pred hcCCeEEcccchhhhhhcccceeecch-----------HHHHHHHHHHHHhhhhcc---ccccccccchhhhhccccHHH
Confidence 76565554222 222233333321 134556666665542222 234456889999865 8899
Q ss_pred HHHHHHHHHHHHhh
Q 018665 332 LQAAVERIKKGLLT 345 (352)
Q Consensus 332 l~~~~~~l~~~~~~ 345 (352)
.++++.-++++.+.
T Consensus 355 ~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 355 VQKLAAFMKEFQKK 368 (370)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999888753
No 397
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=83.25 E-value=7.3 Score=32.67 Aligned_cols=86 Identities=14% Similarity=0.051 Sum_probs=50.8
Q ss_pred HHHHHhcCCCCEEE-ecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHH
Q 018665 51 QAVLAVCSPGDEVI-IPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 129 (352)
Q Consensus 51 ~~~~~l~~~~~~vl-~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~ 129 (352)
.++.+|.+++-.|. +..+.-......++..|.+++..+.+ |.+.|.++++ +...++++.+... ....+
T Consensus 13 ~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~-g~d~v~~~~~~~~---~~~~~ 81 (233)
T PF05368_consen 13 SVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALK-GVDAVFSVTPPSH---PSELE 81 (233)
T ss_dssp HHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHT-TCSEEEEESSCSC---CCHHH
T ss_pred HHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHc-CCceEEeecCcch---hhhhh
Confidence 35555555554333 34444223345667889988766542 7899999998 5555555555332 22344
Q ss_pred HHHHHHHHHHhCCCEEEEe
Q 018665 130 LLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 130 ~l~~l~~~~~~~~~~~liv 148 (352)
.-+.+++.|++. |+-.++
T Consensus 82 ~~~~li~Aa~~a-gVk~~v 99 (233)
T PF05368_consen 82 QQKNLIDAAKAA-GVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHH-T-SEEE
T ss_pred hhhhHHHhhhcc-ccceEE
Confidence 578889999998 875553
No 398
>PRK10595 SOS cell division inhibitor; Provisional
Probab=82.80 E-value=22 Score=28.13 Aligned_cols=87 Identities=6% Similarity=-0.074 Sum_probs=57.7
Q ss_pred hcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHH
Q 018665 56 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 135 (352)
Q Consensus 56 l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~ 135 (352)
+...+.-|+.-.|-+..+...++..|++...+-.-...+..-.+...|++++.+....|+....+ ..+.+.+++|-
T Consensus 52 l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~----~l~~~~~RRLQ 127 (164)
T PRK10595 52 LGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPD----ELTEEEHARLV 127 (164)
T ss_pred HhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcc----cCCHHHHHHHH
Confidence 34456678888999999999999999865554432112211245777888887776677766431 24567788888
Q ss_pred HHHHhCCCEEEE
Q 018665 136 RIVAKHPRLLVL 147 (352)
Q Consensus 136 ~~~~~~~~~~li 147 (352)
-.|+.. +.+.+
T Consensus 128 lAAe~g-~~l~f 138 (164)
T PRK10595 128 DAAQEG-NAMGF 138 (164)
T ss_pred HHHHhC-CCEEE
Confidence 777776 65444
No 399
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=80.35 E-value=15 Score=32.09 Aligned_cols=100 Identities=10% Similarity=0.047 Sum_probs=55.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH---HHhcCCeEEEecccCCCCcccCHHHHHhhccC--
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE-- 108 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~---~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-- 108 (352)
++.+-+++|.||+..=..+..-+.+.|.++++-+-.-.+..+. ++..| ++..+-.+-.+. -++.++.+.+++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence 4566778887777766666666778787776666554444433 33445 555555442111 133334444433
Q ss_pred CeeEEEEcCCC---CCcccCCCHHHHHHHHH
Q 018665 109 KSRLLILCSPS---NPTGSVYPKNLLDEIAR 136 (352)
Q Consensus 109 ~~~~i~i~~p~---nptG~~~~~~~l~~l~~ 136 (352)
+..-|+++|.. .-...-.++++++...+
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~ 143 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFD 143 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHH
Confidence 33445566652 23334467777777654
No 400
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=79.41 E-value=27 Score=27.70 Aligned_cols=85 Identities=5% Similarity=-0.083 Sum_probs=57.7
Q ss_pred cCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcC-CCCCcccCCCHHHHHHHH
Q 018665 57 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS-PSNPTGSVYPKNLLDEIA 135 (352)
Q Consensus 57 ~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~-p~nptG~~~~~~~l~~l~ 135 (352)
...+.-++.-.|-+..+...++..|++...+-.-......-.+...|++++.+....|++. |+. .+.+.+++|-
T Consensus 57 s~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRRLq 131 (168)
T TIGR00623 57 GQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAKLV 131 (168)
T ss_pred cccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHHHH
Confidence 3455677778888888999999999876655332111111246788999988877777777 433 5567788888
Q ss_pred HHHHhCCCEEEE
Q 018665 136 RIVAKHPRLLVL 147 (352)
Q Consensus 136 ~~~~~~~~~~li 147 (352)
-.++.. +.+.+
T Consensus 132 lAA~~G-~al~f 142 (168)
T TIGR00623 132 RAAEEG-NAMGF 142 (168)
T ss_pred HHHHhC-CCeEE
Confidence 877776 65444
No 401
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=77.27 E-value=30 Score=30.56 Aligned_cols=113 Identities=16% Similarity=0.156 Sum_probs=68.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCC--------------------C
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISE--------------------N 94 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~--------------------~ 94 (352)
..+-+++||-.-+-.-+...++-...++-+-..+.. +...++..|+...++++..+. +
T Consensus 29 ~~~~~~aGGKGINVa~vL~~lG~~~~a~GflGg~tg~~~~~~l~~~gi~~~fv~v~g~TRinvki~~~~~~~~Tein~~G 108 (310)
T COG1105 29 RAVTKTAGGKGINVARVLKDLGIPVTALGFLGGFTGEFFVALLKDEGIPDAFVEVKGDTRINVKILDEEDGEETEINFPG 108 (310)
T ss_pred ccceecCCCCceeHHHHHHHcCCCceEEEecCCccHHHHHHHHHhcCCCceEEEccCCCeeeEEEEecCCCcEEEecCCC
Confidence 456677777765554444444444455555555555 667778877777776654311 1
Q ss_pred cccCHHHHHhhcc---C---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 95 FLLDPKVLESKLT---E---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 95 ~~~d~~~l~~~l~---~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
..++.+++++.++ . +...++++. +=|.| ++.+...+|+++|++. ++.+++|....
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsG-SlP~g--~~~d~y~~li~~~~~~-g~~vilD~Sg~ 169 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSG-SLPPG--VPPDAYAELIRILRQQ-GAKVILDTSGE 169 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeC-CCCCC--CCHHHHHHHHHHHHhc-CCeEEEECChH
Confidence 2345555555442 1 333444432 22333 4577899999999999 99999997644
No 402
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=77.15 E-value=24 Score=30.96 Aligned_cols=103 Identities=10% Similarity=0.153 Sum_probs=61.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEec--CCCCCChH--HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGD--EVIIP--APFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~--~vl~~--~~~~~~~~--~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...++++|.+.+.+...++....+++. +|++. .|.+.+.. ..+++.|.++..+.-. ..-..++
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~Ds----------a~~~~~~ 186 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVDS----------AVGAFMS 186 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEech----------HHHHHHH
Confidence 3577899999999988888888777664 55554 37777655 6778899888887621 1111111
Q ss_pred CCeeEEEEc-CCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 108 EKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 108 ~~~~~i~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
+...+++- ..--..|.+...-----|+..|++. ++++++
T Consensus 187 -~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~-~~Pf~v 226 (301)
T COG1184 187 -RVDKVLVGADAILANGALVNKIGTSPLALAAREL-RVPFYV 226 (301)
T ss_pred -hCCEEEECccceecCCcEEeccchHHHHHHHHHh-CCCEEE
Confidence 23333321 1111223333333344577777888 887774
No 403
>PLN02591 tryptophan synthase
Probab=76.26 E-value=26 Score=30.00 Aligned_cols=13 Identities=23% Similarity=0.118 Sum_probs=5.9
Q ss_pred HHHHhcCCeEEEe
Q 018665 75 EMARIADATPVIL 87 (352)
Q Consensus 75 ~~~~~~g~~v~~i 87 (352)
..++..|...+.+
T Consensus 125 ~~~~~~gl~~I~l 137 (250)
T PLN02591 125 AEAAKNGIELVLL 137 (250)
T ss_pred HHHHHcCCeEEEE
Confidence 3444445544444
No 404
>PRK04296 thymidine kinase; Provisional
Probab=75.76 E-value=11 Score=30.63 Aligned_cols=94 Identities=11% Similarity=0.109 Sum_probs=52.6
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCC---CChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCC
Q 018665 47 QSILQAVLAVCSPGDEVIIPAPFW---VSYPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSN 120 (352)
Q Consensus 47 ~a~~~~~~~l~~~~~~vl~~~~~~---~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~n 120 (352)
.++..+. .+...+.+|++..|.. ......+.+.|..+..+.. ...+++.+.+. .+..+|++...+
T Consensus 18 ~~l~~~~-~~~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEaq- 88 (190)
T PRK04296 18 ELLQRAY-NYEERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEAQ- 88 (190)
T ss_pred HHHHHHH-HHHHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEccc-
Confidence 4444433 3444567777775532 2233455566654433222 12333333332 266777776664
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 121 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 121 ptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
.++.+.+.++.+.+++. ++.+|+=.-...
T Consensus 89 ----~l~~~~v~~l~~~l~~~-g~~vi~tgl~~~ 117 (190)
T PRK04296 89 ----FLDKEQVVQLAEVLDDL-GIPVICYGLDTD 117 (190)
T ss_pred ----cCCHHHHHHHHHHHHHc-CCeEEEEecCcc
Confidence 36667788899988888 888886544433
No 405
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=74.18 E-value=23 Score=29.34 Aligned_cols=100 Identities=8% Similarity=0.095 Sum_probs=59.0
Q ss_pred HHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEE
Q 018665 99 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 178 (352)
Q Consensus 99 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 178 (352)
++.++++++.+..++-+=.-+..+-.. .+..+++.++|++| ++.+|+++-..--...+.....+. ...+-+
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~-~v~liINd~~dlA~~~~AdGVHlG------q~D~~~ 94 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKY-GVPLIINDRVDLALAVGADGVHLG------QDDMPL 94 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHh-CCeEEecCcHHHHHhCCCCEEEcC------Ccccch
Confidence 788999998887777665554433222 45678999999999 999998864331100000000110 111223
Q ss_pred eccccccccccceeEEEEcChhHHHHHHhh
Q 018665 179 NGFSKAFAMTGWRLGYIAGPKHFVAACNKI 208 (352)
Q Consensus 179 ~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~ 208 (352)
....|.++ ++..+|+=+.+.+-.......
T Consensus 95 ~~ar~~~~-~~~iIG~S~h~~eea~~A~~~ 123 (211)
T COG0352 95 AEARELLG-PGLIIGLSTHDLEEALEAEEL 123 (211)
T ss_pred HHHHHhcC-CCCEEEeecCCHHHHHHHHhc
Confidence 44456776 777888877766555555443
No 406
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=72.94 E-value=34 Score=29.40 Aligned_cols=11 Identities=18% Similarity=0.380 Sum_probs=5.4
Q ss_pred CeeEEEEcCCC
Q 018665 109 KSRLLILCSPS 119 (352)
Q Consensus 109 ~~~~i~i~~p~ 119 (352)
+...|.++.|+
T Consensus 147 gi~~I~lvaPt 157 (265)
T COG0159 147 GIDPIFLVAPT 157 (265)
T ss_pred CCcEEEEeCCC
Confidence 44445555554
No 407
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=71.97 E-value=19 Score=26.43 Aligned_cols=65 Identities=18% Similarity=0.279 Sum_probs=42.1
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCEEEEecc
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDE 150 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~~livD~ 150 (352)
..++..|.++..++.+ .+.+++.+.+. .++..|.++....++ .....++++..++. |++.+++=.
T Consensus 22 ~~l~~~G~~v~~~d~~------~~~~~l~~~~~~~~pd~V~iS~~~~~~-----~~~~~~l~~~~k~~~p~~~iv~GG 88 (121)
T PF02310_consen 22 AYLRKAGHEVDILDAN------VPPEELVEALRAERPDVVGISVSMTPN-----LPEAKRLARAIKERNPNIPIVVGG 88 (121)
T ss_dssp HHHHHTTBEEEEEESS------B-HHHHHHHHHHTTCSEEEEEESSSTH-----HHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHCCCeEEEECCC------CCHHHHHHHHhcCCCcEEEEEccCcCc-----HHHHHHHHHHHHhcCCCCEEEEEC
Confidence 5677889999988654 35577777664 578888776543322 34467777776654 577777433
No 408
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=70.85 E-value=58 Score=26.81 Aligned_cols=106 Identities=10% Similarity=0.003 Sum_probs=61.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc--cCCeeEEE
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKSRLLI 114 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l--~~~~~~i~ 114 (352)
+-|-+.+....-+...+.-+ +.+-|.|....-.-.+.++.. ++.+..-|.....+. +++.+...+ +.++++-+
T Consensus 61 ~gv~i~~~np~~l~~~V~k~--~~~vv~V~GGd~~vNR~AvE~-~VDVL~~P~~~Rkd~--g~dHVLAKlAa~n~VAIe~ 135 (216)
T PRK03892 61 VAILLVTPKPSLIREVKQRF--LNYLIYVQGGDLRVNRYAIER-GVDAIISPWVGRKDP--GIDHVLARMAAKRGVAIGF 135 (216)
T ss_pred ceEEEecCCHHHHHHHHHhc--cceEEEEECCcHHHHHHHHhc-ccceeecccccCcCC--CccHHHHHHHHHcCeEEEE
Confidence 37777777777777777777 455555655444444455554 766655554321122 344444433 33444433
Q ss_pred EcCC---CCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 115 LCSP---SNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 115 i~~p---~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
--.| .++.-..--..+++++.+++++| ++++++
T Consensus 136 ~L~plL~~~G~~Rar~L~~~r~~l~L~rKY-d~P~VI 171 (216)
T PRK03892 136 SLSPLLRANPYERANILRFMMKAWQLVNKY-KVPRFI 171 (216)
T ss_pred ecHHHHhhCchhHHHHHHHHHHHHHHHHHc-CCCEEE
Confidence 3333 23433444566799999999999 988874
No 409
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=69.54 E-value=78 Score=27.73 Aligned_cols=105 Identities=12% Similarity=0.203 Sum_probs=62.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCC--EEEecC--CCCCChHH--HHHhcCCeEEEecccCCCCcccCHHHHHhhccC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGD--EVIIPA--PFWVSYPE--MARIADATPVILPTRISENFLLDPKVLESKLTE 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~--~vl~~~--~~~~~~~~--~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~ 108 (352)
...+|++|.|.+.-+...+....++++ +|+|.+ |.+.++.. -+...|++...++ | .++-....+
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Msr 230 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSR 230 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhh
Confidence 567899999999888888877766653 444443 55555332 2335677766665 2 223333333
Q ss_pred CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 109 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 109 ~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
-.+.|+-...--+-|.+....-..-++..|+.| -+++++=.
T Consensus 231 VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h-~vPv~VlA 271 (353)
T KOG1465|consen 231 VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHH-SVPVIVLA 271 (353)
T ss_pred cceEEEEeeeEecCCCeeccchHHHHHHHHHhc-CCcEEEec
Confidence 334444444433334344444467778888899 88888644
No 410
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=68.17 E-value=53 Score=28.89 Aligned_cols=101 Identities=16% Similarity=0.191 Sum_probs=56.8
Q ss_pred HHHHHHHH----hcCCCCCCCcEEEeCChHHHHHHHHHHhcC-CCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCc
Q 018665 21 QQFVINLK----ENGLSYTPDQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~----~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~ 95 (352)
.++|.++- +.|.-.+...|+=.+++..++-.++-+..+ -.-.+++|+..-......++.+|.+++.+|... +..
T Consensus 43 DR~A~~mI~~Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~-g~~ 121 (300)
T COG0031 43 DRIALYMIEDAEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAP-GNM 121 (300)
T ss_pred HHHHHHHHHHHHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCC-Cch
Confidence 55665554 445433445666667777777666655433 223445555555556689999999999998731 112
Q ss_pred ccCHHHHHhhccCCee-EEEE---cCCCCCc
Q 018665 96 LLDPKVLESKLTEKSR-LLIL---CSPSNPT 122 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~-~i~i---~~p~npt 122 (352)
.--.+.+++...+.+. .++. .||.||-
T Consensus 122 ~~a~~~a~el~~~~p~~~~~~~Qf~NpaN~~ 152 (300)
T COG0031 122 KGAIERAKELAAEIPGYAVWLNQFENPANPE 152 (300)
T ss_pred HHHHHHHHHHHHhCCCceEchhhcCCCccHH
Confidence 2234444444454544 5554 4444543
No 411
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=67.38 E-value=34 Score=25.24 Aligned_cols=68 Identities=7% Similarity=0.024 Sum_probs=39.0
Q ss_pred HHHHh-cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 75 EMARI-ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 75 ~~~~~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..++. .|..+..+++...++ + .++.+.+..+..-++++.|+ |.|......+-..|.+.|.++ +++++.
T Consensus 38 ~~L~~~~Gi~v~~vk~~~~~g---~-~~i~~~i~~g~i~~VInt~~-~~~~~~~~~dg~~iRr~a~~~-~Ip~~T 106 (115)
T cd01422 38 LLIQEATGLTVNRMKSGPLGG---D-QQIGALIAEGEIDAVIFFRD-PLTAQPHEPDVKALLRLCDVY-NIPLAT 106 (115)
T ss_pred HHHHHhhCCcEEEEecCCCCc---h-hHHHHHHHcCceeEEEEcCC-CCCCCcccccHHHHHHHHHHc-CCCEEE
Confidence 34444 688887774422222 3 44666665554445555553 212222123478999999999 988874
No 412
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=66.96 E-value=68 Score=26.73 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=64.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCC--EEE-ecCCC---CC-------ChHHHHHhcCCeEEEecccCCCCcccCHHHHHh
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGD--EVI-IPAPF---WV-------SYPEMARIADATPVILPTRISENFLLDPKVLES 104 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~--~vl-~~~~~---~~-------~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~ 104 (352)
-+.+.+||-.++..+..++...-+ .++ +.... |+ .....++..|..+......-. ..-..++|.+
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~~ 80 (223)
T COG2102 3 VIALYSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELKE 80 (223)
T ss_pred EEEEEecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHHH
Confidence 367788999988877777643222 111 11111 11 122456678999888876531 2235677777
Q ss_pred hccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 105 KLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 105 ~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+++. +...|+ +|.+.+......+-++|++. |+..+
T Consensus 81 ~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~l-Gl~~~ 116 (223)
T COG2102 81 ALRRLKVDGIV-------AGAIASEYQKERVERLCEEL-GLKVY 116 (223)
T ss_pred HHHhCcccEEE-------EchhhhHHHHHHHHHHHHHh-CCEEe
Confidence 7753 445666 69999999999999999998 87666
No 413
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=65.95 E-value=54 Score=28.79 Aligned_cols=74 Identities=11% Similarity=0.196 Sum_probs=48.3
Q ss_pred cCCCCCChHHHHHh--cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 018665 66 PAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 143 (352)
Q Consensus 66 ~~~~~~~~~~~~~~--~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~ 143 (352)
--|+|.+..++... -..-++.+|.. .-++.++++.+.+++.+++..... +.++-++|.++|+++ |
T Consensus 50 G~~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~gvk~avI~s~Gf------~~~~~~~l~~~a~~~-g 116 (291)
T PRK05678 50 GLPVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDAGIDLIVCITEGI------PVLDMLEVKAYLERK-K 116 (291)
T ss_pred CeeccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc-C
Confidence 34567777777765 34444444432 357888888888888776655443 234346899999999 9
Q ss_pred EEEEecccc
Q 018665 144 LLVLSDEIY 152 (352)
Q Consensus 144 ~~livD~~~ 152 (352)
+.++-=++.
T Consensus 117 irvlGPNc~ 125 (291)
T PRK05678 117 TRLIGPNCP 125 (291)
T ss_pred CEEECCCCC
Confidence 999944443
No 414
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=65.06 E-value=34 Score=27.18 Aligned_cols=89 Identities=13% Similarity=0.068 Sum_probs=49.2
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCC
Q 018665 40 LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 119 (352)
Q Consensus 40 ~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~ 119 (352)
+++.++...=..++..|.+.+-+|....-.-..... ..++++...++ .|++.+.++++ +...++.+.+.
T Consensus 2 ~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~-~~d~vi~~~~~ 70 (183)
T PF13460_consen 2 LVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALK-GADAVIHAAGP 70 (183)
T ss_dssp EEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHT-TSSEEEECCHS
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhh-hcchhhhhhhh
Confidence 344433233344666666666666554433222222 44555544443 37888999888 55555554433
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 120 NPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 120 nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
.+. +....+.+++.|++. ++
T Consensus 71 ~~~----~~~~~~~~~~a~~~~-~~ 90 (183)
T PF13460_consen 71 PPK----DVDAAKNIIEAAKKA-GV 90 (183)
T ss_dssp TTT----HHHHHHHHHHHHHHT-TS
T ss_pred hcc----ccccccccccccccc-cc
Confidence 322 255688888888887 54
No 415
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=65.05 E-value=49 Score=28.57 Aligned_cols=14 Identities=21% Similarity=0.339 Sum_probs=7.6
Q ss_pred HHHHhcCCeEEEec
Q 018665 75 EMARIADATPVILP 88 (352)
Q Consensus 75 ~~~~~~g~~v~~i~ 88 (352)
.-++..|++-+.+|
T Consensus 113 ~~~~~aGvdgviip 126 (263)
T CHL00200 113 KKISQAGVKGLIIP 126 (263)
T ss_pred HHHHHcCCeEEEec
Confidence 44455566555555
No 416
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=64.72 E-value=44 Score=28.76 Aligned_cols=82 Identities=23% Similarity=0.195 Sum_probs=45.4
Q ss_pred CEEEecCCCCC---ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCC-HHHHHHHHH
Q 018665 61 DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP-KNLLDEIAR 136 (352)
Q Consensus 61 ~~vl~~~~~~~---~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~-~~~l~~l~~ 136 (352)
|.+++|+--+. .+...++..|...+.+-.+. .+.+.+++..+.....|++......||...+ ...+++..+
T Consensus 117 dGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p~-----t~~~Ri~~i~~~a~gFiY~vs~~GvTG~~~~~~~~l~~~i~ 191 (259)
T PF00290_consen 117 DGLIIPDLPPEESEELREAAKKHGLDLIPLVAPT-----TPEERIKKIAKQASGFIYLVSRMGVTGSRTELPDELKEFIK 191 (259)
T ss_dssp EEEEETTSBGGGHHHHHHHHHHTT-EEEEEEETT-----S-HHHHHHHHHH-SSEEEEESSSSSSSTTSSCHHHHHHHHH
T ss_pred CEEEEcCCChHHHHHHHHHHHHcCCeEEEEECCC-----CCHHHHHHHHHhCCcEEEeeccCCCCCCcccchHHHHHHHH
Confidence 66777774433 34456667777766665431 1445555555545556666666666776543 345777777
Q ss_pred HHHhCCCEEEE
Q 018665 137 IVAKHPRLLVL 147 (352)
Q Consensus 137 ~~~~~~~~~li 147 (352)
.++++.+.+++
T Consensus 192 ~ik~~~~~Pv~ 202 (259)
T PF00290_consen 192 RIKKHTDLPVA 202 (259)
T ss_dssp HHHHTTSS-EE
T ss_pred HHHhhcCcceE
Confidence 77766334444
No 417
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=63.49 E-value=84 Score=25.91 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=58.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEE
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 113 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i 113 (352)
+....+++..||..|...+ ..|++.|-.|.+.+|....-...+...| ++..+.-. ...+.+. +..+
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~------~~~~dl~-----~~~l- 72 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLARC------FDADILE-----GAFL- 72 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeCC------CCHHHhC-----CcEE-
Confidence 4667899999998888755 5555667778888887665544444444 45555422 1223321 3344
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEE-Eeccc
Q 018665 114 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV-LSDEI 151 (352)
Q Consensus 114 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~l-ivD~~ 151 (352)
++..++++ +--..+...|++. ++++ ++|+.
T Consensus 73 Vi~at~d~-------~ln~~i~~~a~~~-~ilvn~~d~~ 103 (205)
T TIGR01470 73 VIAATDDE-------ELNRRVAHAARAR-GVPVNVVDDP 103 (205)
T ss_pred EEECCCCH-------HHHHHHHHHHHHc-CCEEEECCCc
Confidence 44444442 2246788999998 8877 34554
No 418
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=61.89 E-value=55 Score=29.26 Aligned_cols=76 Identities=16% Similarity=0.204 Sum_probs=52.6
Q ss_pred cCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEE
Q 018665 66 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 145 (352)
Q Consensus 66 ~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~ 145 (352)
..-.|.+|...++...++++++..+.... .+.+.-++. +-+.|.+.-|-. ++.++.++|.+.|+++ ++
T Consensus 57 ~~k~y~syEeLakd~~vDvVyi~~~~~qH----~evv~l~l~-~~K~VL~EKPla-----~n~~e~~~iveaA~~r-gv- 124 (351)
T KOG2741|consen 57 NPKAYGSYEELAKDPEVDVVYISTPNPQH----YEVVMLALN-KGKHVLCEKPLA-----MNVAEAEEIVEAAEAR-GV- 124 (351)
T ss_pred CCccccCHHHHhcCCCcCEEEeCCCCccH----HHHHHHHHH-cCCcEEeccccc-----CCHHHHHHHHHHHHHc-Cc-
Confidence 34578899999999999999999874332 233333333 334466666643 5578899999999999 84
Q ss_pred EEeccccc
Q 018665 146 VLSDEIYE 153 (352)
Q Consensus 146 livD~~~~ 153 (352)
++.|..+.
T Consensus 125 ~~meg~~~ 132 (351)
T KOG2741|consen 125 FFMEGLWW 132 (351)
T ss_pred EEEeeeee
Confidence 44476654
No 419
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=61.67 E-value=85 Score=26.66 Aligned_cols=78 Identities=10% Similarity=0.108 Sum_probs=49.7
Q ss_pred CEEEecCCCCCChH----HHHHhcCCeEEEec-ccCCCC---cccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCH
Q 018665 61 DEVIIPAPFWVSYP----EMARIADATPVILP-TRISEN---FLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPK 128 (352)
Q Consensus 61 ~~vl~~~~~~~~~~----~~~~~~g~~v~~i~-~~~~~~---~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~ 128 (352)
.+|.+-+|.-.... ..++..|++|..+. +...++ ..++++.+.+.++ ++..+|++++-|=++
T Consensus 121 ~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~aDAifisCTnLrt------ 194 (239)
T TIGR02990 121 RRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDADALFLSCTALRA------ 194 (239)
T ss_pred CEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCCCEEEEeCCCchh------
Confidence 67888888554433 45567899988773 332222 3468888888774 477888887655444
Q ss_pred HHHHHHHHHHHhCCCEEEE
Q 018665 129 NLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 129 ~~l~~l~~~~~~~~~~~li 147 (352)
+.-|.++=++. |.+++
T Consensus 195 --~~vi~~lE~~l-GkPVl 210 (239)
T TIGR02990 195 --ATCAQRIEQAI-GKPVV 210 (239)
T ss_pred --HHHHHHHHHHH-CCCEE
Confidence 33444444566 88887
No 420
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=60.40 E-value=33 Score=25.74 Aligned_cols=57 Identities=11% Similarity=0.275 Sum_probs=41.1
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEE--cCC---CCCcccCCCHHHHHHHHHHHHhC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLIL--CSP---SNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i--~~p---~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
++..++++ -...+|+..+.+++..+...|++ |.| ++..|...-.++++.+.++..+.
T Consensus 28 ~vriIrvp--C~Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~ 89 (124)
T PF02662_consen 28 NVRIIRVP--CSGRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEEL 89 (124)
T ss_pred CeEEEEcc--CCCccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHc
Confidence 44455554 33459999999999887777665 444 45788888877888888877776
No 421
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=59.74 E-value=77 Score=27.75 Aligned_cols=76 Identities=11% Similarity=0.192 Sum_probs=49.3
Q ss_pred ecCCCCCChHHHHHhc--CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 018665 65 IPAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 142 (352)
Q Consensus 65 ~~~~~~~~~~~~~~~~--g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 142 (352)
.--|+|.+..++.+.. ..-++.+|.. .-++.++++.+.+++.+++..... +...-++|.++|+++
T Consensus 47 ~G~~~y~sv~dlp~~~~~Dlavi~vpa~------~v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~- 113 (286)
T TIGR01019 47 LGLPVFDSVKEAVEETGANASVIFVPAP------FAADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEES- 113 (286)
T ss_pred cCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc-
Confidence 3446777777777653 4444444421 357788888888888777655543 222357899999999
Q ss_pred CEEEEeccccc
Q 018665 143 RLLVLSDEIYE 153 (352)
Q Consensus 143 ~~~livD~~~~ 153 (352)
|+.++-=++.+
T Consensus 114 girilGPNc~G 124 (286)
T TIGR01019 114 GTRLIGPNCPG 124 (286)
T ss_pred CCEEECCCCce
Confidence 99999444433
No 422
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=58.92 E-value=1e+02 Score=25.46 Aligned_cols=113 Identities=12% Similarity=0.111 Sum_probs=67.3
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC----hHHHHHhcCCeEEEecccC-CCC-
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRI-SEN- 94 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~----~~~~~~~~g~~v~~i~~~~-~~~- 94 (352)
+.++..+. +...+-.+..+++.++ ++++|-- .+|.+..|.-.. ....++..|++++.+.--. .++
T Consensus 88 ~ei~~~ie------~~~~v~vvTts~Avv~-aL~al~a--~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~~~Lgi~dn~ 158 (238)
T COG3473 88 KEIAQRIE------EAKGVPVVTTSTAVVE-ALNALGA--QRISVLTPYIDEVNQREIEFLEANGFEIVDFKGLGITDNL 158 (238)
T ss_pred HHHHHHHH------hccCCceeechHHHHH-HHHhhCc--ceEEEeccchhhhhhHHHHHHHhCCeEEEEeeccCCcccc
Confidence 66666665 3335555555544444 6666622 467777775544 4467788899887765321 111
Q ss_pred --cccCHHHHHhhc----cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 95 --FLLDPKVLESKL----TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 95 --~~~d~~~l~~~l----~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
..++|..+-+.- +++..++++++.|-+| ..-|.++=++. |++++.-..
T Consensus 159 eigr~~P~~~y~lAk~~~~~~~DaiFiSCTnlRt--------~eii~~lE~~~-G~PVvsSN~ 212 (238)
T COG3473 159 EIGRQEPWAVYRLAKEVFTPDADAIFISCTNLRT--------FEIIEKLERDT-GVPVVSSNQ 212 (238)
T ss_pred hhcccChHHHHHHHHHhcCCCCCeEEEEeecccc--------HHHHHHHHHHh-CCceeeccH
Confidence 234555443322 4588899998777665 55555556677 999986543
No 423
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=58.60 E-value=49 Score=21.60 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=37.8
Q ss_pred hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEec
Q 018665 73 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD 149 (352)
+...++..|.++..+.- ..+.+.. ....+++.+|... ++ .+++++|.+++++- |-++|+|
T Consensus 10 ~~~~L~~~g~~v~~~~~--------~~~~l~~----~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G-~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRK--------PYEALEA----DDGTLLVIGPDLR----LSEPEEAEALLEWVEAG-NTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEecc--------cHHHhCC----CCCEEEEEeCCCC----CCchHHHHHHHHHHHcC-CEEEEeC
Confidence 44677778888876643 2334432 3334444555421 33 47799999999988 8888865
No 424
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=58.29 E-value=21 Score=30.22 Aligned_cols=64 Identities=9% Similarity=0.045 Sum_probs=40.4
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..++..|.++..+ .+...+..--.+.+++++..++.+|++....... ...+++-|++. |+++|.
T Consensus 22 ~~a~~~g~~~~~~-~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~--------~~~~l~~~~~~-gIpvv~ 85 (257)
T PF13407_consen 22 AAAKELGYEVEIV-FDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDS--------LAPFLEKAKAA-GIPVVT 85 (257)
T ss_dssp HHHHHHTCEEEEE-EESTTTHHHHHHHHHHHHHTTESEEEEESSSTTT--------THHHHHHHHHT-TSEEEE
T ss_pred HHHHHcCCEEEEe-CCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHH--------HHHHHHHHhhc-CceEEE
Confidence 5667889998886 2222322223455666667788888866554322 44556667788 898885
No 425
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=58.29 E-value=1.9e+02 Score=28.29 Aligned_cols=138 Identities=12% Similarity=0.156 Sum_probs=71.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHH---HHhhccC-Cee
Q 018665 39 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKV---LESKLTE-KSR 111 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~---l~~~l~~-~~~ 111 (352)
++.|.||-+... -+-+++.+|-. ||-+|--.-.. ..++..|+....+.-. ++.++ +.+.+.. ..+
T Consensus 38 vmPTGgGKSlCy-QiPAll~~G~T-LVVSPLiSLM~DQV~~l~~~Gi~A~~lnS~------l~~~e~~~v~~~l~~g~~k 109 (590)
T COG0514 38 VMPTGGGKSLCY-QIPALLLEGLT-LVVSPLISLMKDQVDQLEAAGIRAAYLNST------LSREERQQVLNQLKSGQLK 109 (590)
T ss_pred EccCCCCcchHh-hhHHHhcCCCE-EEECchHHHHHHHHHHHHHcCceeehhhcc------cCHHHHHHHHHHHhcCcee
Confidence 355566666554 45555556644 44455443333 4566778777776532 34444 3444433 466
Q ss_pred EEEEcCC--CCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc
Q 018665 112 LLILCSP--SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 189 (352)
Q Consensus 112 ~i~i~~p--~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 189 (352)
+++++.= .+| ..++.|. +-. -.++++||||+-.-|+.+.-+.+.. ++.+.+.+ +.
T Consensus 110 lLyisPErl~~~-------~f~~~L~---~~~-i~l~vIDEAHCiSqWGhdFRP~Y~~----------lg~l~~~~--~~ 166 (590)
T COG0514 110 LLYISPERLMSP-------RFLELLK---RLP-ISLVAIDEAHCISQWGHDFRPDYRR----------LGRLRAGL--PN 166 (590)
T ss_pred EEEECchhhcCh-------HHHHHHH---hCC-CceEEechHHHHhhcCCccCHhHHH----------HHHHHhhC--CC
Confidence 6665432 222 2233333 233 5789999999976554433344433 33344444 34
Q ss_pred ceeEEEE--cChhHHHHHHh
Q 018665 190 WRLGYIA--GPKHFVAACNK 207 (352)
Q Consensus 190 ~~~g~l~--~~~~~~~~~~~ 207 (352)
.++-.+. +++.+.+.+..
T Consensus 167 ~p~~AlTATA~~~v~~DI~~ 186 (590)
T COG0514 167 PPVLALTATATPRVRDDIRE 186 (590)
T ss_pred CCEEEEeCCCChHHHHHHHH
Confidence 4455553 56666665543
No 426
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=58.10 E-value=25 Score=32.04 Aligned_cols=64 Identities=16% Similarity=0.165 Sum_probs=42.2
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+..+..++..+... ..+...|.+.++ .+..+++++... -|...+ .+.++++|++. |+++++|--
T Consensus 113 nQQllRvD~Ee~~~-~~~~~~ll~~~~~~l~~~~~vVLSDY~--KG~L~~---~q~~I~~ar~~-~~pVLvDPK 179 (467)
T COG2870 113 NQQLLRLDFEEKFP-IEDENKLLEKIKNALKSFDALVLSDYA--KGVLTN---VQKMIDLAREA-GIPVLVDPK 179 (467)
T ss_pred cceEEEecccccCc-chhHHHHHHHHHHHhhcCCEEEEeccc--cccchh---HHHHHHHHHHc-CCcEEECCC
Confidence 34555555442221 134455555554 367788876654 577777 99999999999 999999954
No 427
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=57.50 E-value=58 Score=30.05 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCC--
Q 018665 45 AKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPS-- 119 (352)
Q Consensus 45 ~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~-- 119 (352)
=+..+..+...+.+.+ +||.-+..-.. ...-+++.|.....+.+-.+ .+++.+.+.+. .++.++++.+.+
T Consensus 106 KSTLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aE----t~~e~I~~~l~~~~p~lvVIDSIQT~ 180 (456)
T COG1066 106 KSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAE----TNLEDIIAELEQEKPDLVVIDSIQTL 180 (456)
T ss_pred HHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEEehh----cCHHHHHHHHHhcCCCEEEEecccee
Confidence 3455555666666666 56654443322 33455666754333333222 37888888775 588888876653
Q ss_pred -C------CcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 120 -N------PTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 120 -n------ptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
+ |.+...-.+--.+|.++|+++ |+.++.
T Consensus 181 ~s~~~~SapGsVsQVRe~t~~L~~~AK~~-~i~~fi 215 (456)
T COG1066 181 YSEEITSAPGSVSQVREVAAELMRLAKTK-NIAIFI 215 (456)
T ss_pred ecccccCCCCcHHHHHHHHHHHHHHHHHc-CCeEEE
Confidence 2 233333455678899999999 886664
No 428
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=56.68 E-value=91 Score=26.24 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=40.9
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEecCCCCC--ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCC
Q 018665 42 SNGAKQSILQAVLAVCSPGDEVIIPAPFWV--SYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSP 118 (352)
Q Consensus 42 ~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~--~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p 118 (352)
..+..+++...+.....++.+|+++..... .....++..|..+..+++-.......+.+++.+.+.. +...|++.+|
T Consensus 100 ~~~~~e~L~~~~~~~~~~~~~vL~~rg~~~r~~l~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~~d~i~f~S~ 179 (240)
T PRK09189 100 GGGDGVRLAETVAAALAPTARLLYLAGRPRAPVFEDRLAAAGIPFRVAECYDMLPVMYSPATLSAILGGAPFDAVLLYSR 179 (240)
T ss_pred CCCCHHHHHHHHHHhcCCCCcEEEeccCcccchhHHHHHhCCCeeEEEEEEEeecCCCChHHHHHHHhcCCCCEEEEeCH
Confidence 344555555444433345667887765443 3456777888877776653211112344555555543 4555555444
No 429
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=55.81 E-value=99 Score=26.29 Aligned_cols=108 Identities=14% Similarity=0.144 Sum_probs=63.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCcccC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
+..|+.+.++|+. ..+....+.++++...+....+.+.+|+++...-.. ....+...|.++..+++-....-..+
T Consensus 87 ~~Ta~~l~~~G~~---~~~~p~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~G~~v~~~~~Y~~~~~~~~ 163 (248)
T COG1587 87 EKTAEALRKLGIK---VDFIPEDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEERGAEVREVEVYRTEPPPLD 163 (248)
T ss_pred HHHHHHHHHhCCC---CCcCCCccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhCCCEEEEEeeeeecCCCcc
Confidence 3445555544432 222223566667776776666557788888765554 66788889999998887543333334
Q ss_pred HHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 99 PKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 99 ~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
.+.+.+.+. .+..+|++.++ ...+.+..++.+.
T Consensus 164 ~~~~~~~~~~~~~d~v~ftS~----------~~v~~~~~~~~~~ 197 (248)
T COG1587 164 EATLIELLKLGEVDAVVFTSS----------SAVRALLALAPES 197 (248)
T ss_pred HHHHHHHHHhCCCCEEEEeCH----------HHHHHHHHHcccc
Confidence 444444454 35556655333 3366777666554
No 430
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=55.36 E-value=39 Score=30.30 Aligned_cols=68 Identities=9% Similarity=0.109 Sum_probs=44.0
Q ss_pred CEEEecCCCCC-ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcC-CCCCcccCCCHHHHHHHHHHH
Q 018665 61 DEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS-PSNPTGSVYPKNLLDEIARIV 138 (352)
Q Consensus 61 ~~vl~~~~~~~-~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~-p~nptG~~~~~~~l~~l~~~~ 138 (352)
.+|++.+..-. +..+.+...|+++..+|.+ .+.+++. +-++..|+++| |.+|.-.. ..+..+.++.
T Consensus 180 ~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl---~~~pDGiflSNGPGDP~~~~---~~i~~ik~l~ 247 (368)
T COG0505 180 KHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEIL---ALNPDGIFLSNGPGDPAPLD---YAIETIKELL 247 (368)
T ss_pred cEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHH---hhCCCEEEEeCCCCChhHHH---HHHHHHHHHh
Confidence 35666665554 6668888999999999964 3556553 34788999876 67874222 2355555555
Q ss_pred Hh
Q 018665 139 AK 140 (352)
Q Consensus 139 ~~ 140 (352)
..
T Consensus 248 ~~ 249 (368)
T COG0505 248 GT 249 (368)
T ss_pred cc
Confidence 44
No 431
>PRK04148 hypothetical protein; Provisional
Probab=55.03 E-value=93 Score=23.72 Aligned_cols=22 Identities=18% Similarity=0.252 Sum_probs=17.4
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEe
Q 018665 126 YPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 126 ~~~~~l~~l~~~~~~~~~~~liv 148 (352)
+|.|-...|.+++++. |+-+++
T Consensus 86 pp~el~~~~~~la~~~-~~~~~i 107 (134)
T PRK04148 86 PPRDLQPFILELAKKI-NVPLII 107 (134)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEE
Confidence 4567788999999999 887663
No 432
>PRK08265 short chain dehydrogenase; Provisional
Probab=54.19 E-value=1.4e+02 Score=25.40 Aligned_cols=56 Identities=16% Similarity=0.052 Sum_probs=32.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEeccc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 90 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~ 90 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATD 60 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEec
Confidence 44556666655554455666777788888776543333344445556566666554
No 433
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=54.16 E-value=32 Score=30.83 Aligned_cols=68 Identities=10% Similarity=0.136 Sum_probs=43.3
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+.+...+.++.-+.+.++.+|.+....+-+.-..... .....+.|..++.+++++|++.|+++ ++-||
T Consensus 25 d~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~r-gI~vI 92 (329)
T cd06568 25 DLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAER-HITVV 92 (329)
T ss_pred HHHHHhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHc-CCEEE
Confidence 4555667777777776666666554443322211110 01123456678999999999999999 99877
No 434
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=54.13 E-value=99 Score=23.80 Aligned_cols=72 Identities=8% Similarity=0.015 Sum_probs=41.5
Q ss_pred ChHHHHHhc-CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCC--CCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 72 SYPEMARIA-DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP--SNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 72 ~~~~~~~~~-g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p--~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
++...++.. |+++..+ +....+. + .++.+.+..+...+|++.| ..+.+. ..+...|.+.|.++ |++++.
T Consensus 40 gTa~~L~~~~Gi~v~~v-i~~~~gg--~-~~i~~~I~~g~i~lVInt~dp~~~~~~---~~D~~~IRR~Av~~-~IP~~T 111 (142)
T PRK05234 40 TTGGLIQEATGLDVTRL-LSGPLGG--D-QQIGALIAEGKIDMLIFFRDPLTAQPH---DPDVKALLRLADVW-NIPVAT 111 (142)
T ss_pred hHHHHHHhccCCeeEEE-EcCCCCC--c-hhHHHHHHcCceeEEEEecCCCCCCcc---cchHHHHHHHHHHc-CCCEEc
Confidence 344455555 7777766 3211111 2 4466666555444455544 433322 23377999999999 999986
Q ss_pred ccc
Q 018665 149 DEI 151 (352)
Q Consensus 149 D~~ 151 (352)
.-.
T Consensus 112 ~l~ 114 (142)
T PRK05234 112 NRA 114 (142)
T ss_pred CHH
Confidence 644
No 435
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=54.01 E-value=1.6e+02 Score=27.57 Aligned_cols=53 Identities=19% Similarity=0.181 Sum_probs=37.1
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
..|+-.++|..+...+..+- .+-.-.|++|...-..-....+.+|.+++.++-
T Consensus 63 ~~vv~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 63 DTIIEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CEEEEeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 56777777777777666553 333346667766555566788999999999874
No 436
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=53.73 E-value=1.3e+02 Score=26.66 Aligned_cols=54 Identities=17% Similarity=0.030 Sum_probs=35.3
Q ss_pred CCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 36 PDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
...|+-.+++..+...+..+- .+-.-.|+++...-..-...++..|.+++.++-
T Consensus 70 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 70 VKAVACASTGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred CCEEEEeCCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 456777777777776554442 333346667666544555788899999998863
No 437
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=52.81 E-value=72 Score=30.01 Aligned_cols=115 Identities=16% Similarity=0.230 Sum_probs=61.5
Q ss_pred CCCCcEEEeCChHH---HHHHHHHHhcCCC--CEEEecCC---------CCCChHHHHHhcCCeEEEecccCCCCcccCH
Q 018665 34 YTPDQILVSNGAKQ---SILQAVLAVCSPG--DEVIIPAP---------FWVSYPEMARIADATPVILPTRISENFLLDP 99 (352)
Q Consensus 34 ~~~~~i~~~~g~~~---a~~~~~~~l~~~~--~~vl~~~~---------~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~ 99 (352)
+.+..|.+...+.. .-..++..+.+.| .+|..-+| +|.+...+...-..-++.+|.. .-+
T Consensus 5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i~G~~~~~sl~~lp~~~Dlavi~vp~~------~~~ 78 (447)
T TIGR02717 5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEILGVKAYPSVLEIPDPVDLAVIVVPAK------YVP 78 (447)
T ss_pred cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCccCCccccCCHHHCCCCCCEEEEecCHH------HHH
Confidence 36777777643221 1233444444433 24554444 4444444333223333333321 246
Q ss_pred HHHHhhccCCeeEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 100 KVLESKLTEKSRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 100 ~~l~~~l~~~~~~i~i~~p~n-ptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
+.++++.+.+++.+++..... .+|.- ..+.-+++.++|+++ |+.++--++.+...
T Consensus 79 ~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~-girvlGPnc~G~~~ 134 (447)
T TIGR02717 79 QVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKY-GMRLLGPNCLGIIN 134 (447)
T ss_pred HHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHc-CCEEEecCeeeEec
Confidence 677777777888776644432 33321 112247899999999 99999888766543
No 438
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=51.57 E-value=64 Score=28.78 Aligned_cols=106 Identities=12% Similarity=0.142 Sum_probs=66.4
Q ss_pred CChHHHHHHHHHHhcCCCCEEEecCC-CCCC-hHHHH----HhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEc
Q 018665 43 NGAKQSILQAVLAVCSPGDEVIIPAP-FWVS-YPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 116 (352)
Q Consensus 43 ~g~~~a~~~~~~~l~~~~~~vl~~~~-~~~~-~~~~~----~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~ 116 (352)
.|=|..+-.+...+.+.|-+|++-.. +|.. -..++ ++.|+.++.-+ .-.+.-.+-.|.++.+..++...+++.
T Consensus 150 ~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~-~G~DpAaVafDAi~~Akar~~DvvliD 228 (340)
T COG0552 150 VGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK-EGADPAAVAFDAIQAAKARGIDVVLID 228 (340)
T ss_pred CchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC-CCCCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 44566777778888888877776543 4432 22333 35677766543 111111244567777777888888886
Q ss_pred CC---CCCcccCCCHHHHHHHHHHHHhCCC------EEEEeccccc
Q 018665 117 SP---SNPTGSVYPKNLLDEIARIVAKHPR------LLVLSDEIYE 153 (352)
Q Consensus 117 ~p---~nptG~~~~~~~l~~l~~~~~~~~~------~~livD~~~~ 153 (352)
.. ||-..- .+++++|.+++++. . ++++.|..-+
T Consensus 229 TAGRLhnk~nL---M~EL~KI~rV~~k~-~~~ap~e~llvlDAttG 270 (340)
T COG0552 229 TAGRLHNKKNL---MDELKKIVRVIKKD-DPDAPHEILLVLDATTG 270 (340)
T ss_pred CcccccCchhH---HHHHHHHHHHhccc-cCCCCceEEEEEEcccC
Confidence 65 554422 45699999999876 4 6777798755
No 439
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=51.49 E-value=1.7e+02 Score=25.79 Aligned_cols=106 Identities=17% Similarity=0.107 Sum_probs=61.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCC--CEEEecCCC--CCC--hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVC--SPG--DEVIIPAPF--WVS--YPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~--~~~--~~vl~~~~~--~~~--~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
+..+.++|-|+.+++..-..+.+ +-| ...++..+. |.. .....+.+|..++.++...+..-....+++.+.+
T Consensus 62 ~g~dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~ 141 (323)
T COG2515 62 KGADTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEV 141 (323)
T ss_pred cCCcEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHH
Confidence 55678999999999876555432 222 233333333 332 2345567899999988763332234566666666
Q ss_pred cC--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 018665 107 TE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 140 (352)
Q Consensus 107 ~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~ 140 (352)
+. +...+|...-.||-|..-=.+...||.+.+++
T Consensus 142 ~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 142 RKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred HhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 53 22334433336775555444447777777764
No 440
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=51.35 E-value=93 Score=22.64 Aligned_cols=95 Identities=8% Similarity=0.093 Sum_probs=51.4
Q ss_pred HHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccC
Q 018665 47 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSV 125 (352)
Q Consensus 47 ~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~ 125 (352)
+.+..+...+.+.|=++..+. ++...++..|.++..+.-..+++ + .++.+.+.+ +..-++++.|. +.-..
T Consensus 12 ~~~~~~a~~l~~~G~~i~AT~----gTa~~L~~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~~~~ 82 (112)
T cd00532 12 AMLVDLAPKLSSDGFPLFATG----GTSRVLADAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PRRDR 82 (112)
T ss_pred HHHHHHHHHHHHCCCEEEECc----HHHHHHHHcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CCccc
Confidence 334444455545555555443 34445666788777765432211 2 334555555 44444555553 11101
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 126 YPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 126 ~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
....+-..|.+.|.++ +++++.+-.
T Consensus 83 ~~~~dg~~iRR~A~~~-~Ip~~T~~~ 107 (112)
T cd00532 83 CTDEDGTALLRLARLY-KIPVTTPNA 107 (112)
T ss_pred ccCCChHHHHHHHHHc-CCCEEECHH
Confidence 1122377889999999 999997643
No 441
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=51.07 E-value=32 Score=30.34 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=42.5
Q ss_pred HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 74 PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
.+.+...+.++.-+.+.++.+|.+.....-+.-..... .++ .+.+..++.+++++|.+.|+++ |+-||
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~r-gI~vi 89 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAAR-GIEVI 89 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHc-CCEEE
Confidence 34555677888777777656665544333222211100 111 2345678999999999999999 99777
No 442
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=50.73 E-value=1.5e+02 Score=24.86 Aligned_cols=111 Identities=16% Similarity=0.192 Sum_probs=66.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHH-HHHHHHHHhcCCCCEEEecCCCCCChH-----HHHHhcCCeEEEecccCCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQ-SILQAVLAVCSPGDEVIIPAPFWVSYP-----EMARIADATPVILPTRISEN 94 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~-a~~~~~~~l~~~~~~vl~~~~~~~~~~-----~~~~~~g~~v~~i~~~~~~~ 94 (352)
+.+|+.++ ++- ....+++..+ -+..+...+.+.|=..++..--+..+. +.++..|.+. ..|+.
T Consensus 51 ~~qA~alg-----iPl-~~~~~~~~~e~~~~~l~~~l~~~gv~~vv~GdI~s~~qr~~~e~vc~~~gl~~-~~PLW---- 119 (222)
T TIGR00289 51 DLVAEAVG-----IPL-IKLYTSGEEEKEVEDLAGQLGELDVEALCIGAIESNYQKSRIDKVCRELGLKS-IAPLW---- 119 (222)
T ss_pred HHHHHHcC-----CCe-EEEEcCCchhHHHHHHHHHHHHcCCCEEEECccccHHHHHHHHHHHHHcCCEE-ecccc----
Confidence 67777775 322 3333444333 344444555444433444443333222 6777888876 44553
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCC-----CCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPS-----NPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~-----nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
+.|.++|.+.++.+-++++++... .=-|..++.+.+++|.++.++| ++
T Consensus 120 -~~d~~~l~e~i~~Gf~aiIv~v~~~gL~~~~LGr~id~~~~~~L~~l~~~~-gi 172 (222)
T TIGR00289 120 -HADPEKLMYEVAEKFEVIIVSVSAMGLDESWLGRRIDKECIDDLKRLNEKY-GI 172 (222)
T ss_pred -CCCHHHHHHHHHcCCeEEEEEEccCCCChHHcCCccCHHHHHHHHHHHhhc-Cc
Confidence 457777777777777776654332 2367888888899999988888 75
No 443
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=50.50 E-value=1.4e+02 Score=25.57 Aligned_cols=55 Identities=13% Similarity=0.144 Sum_probs=28.2
Q ss_pred hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHH
Q 018665 73 YPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARI 137 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~ 137 (352)
+...+...|+.-..+|-.+. -..+++.+.++ .+...+++++|+. +.++++++++.
T Consensus 107 f~~~~~~aGvdgviipDlp~----ee~~~~~~~~~~~gl~~i~lv~P~T------~~eri~~i~~~ 162 (256)
T TIGR00262 107 FYAKCKEVGVDGVLVADLPL----EESGDLVEAAKKHGVKPIFLVAPNA------DDERLKQIAEK 162 (256)
T ss_pred HHHHHHHcCCCEEEECCCCh----HHHHHHHHHHHHCCCcEEEEECCCC------CHHHHHHHHHh
Confidence 44566677777766663211 12333444443 3556666666664 23445555553
No 444
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=50.43 E-value=40 Score=24.54 Aligned_cols=69 Identities=14% Similarity=0.211 Sum_probs=42.3
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.|.++...+.....+++.+..+.. .-.+-+.++++.+. -|++.-|-. .+.++.++|.++++++ ++.+.+
T Consensus 50 ~~~~~~~ll~~~~~D~V~I~tp~~----~h~~~~~~~l~~g~-~v~~EKP~~-----~~~~~~~~l~~~a~~~-~~~~~V 118 (120)
T PF01408_consen 50 VYTDLEELLADEDVDAVIIATPPS----SHAEIAKKALEAGK-HVLVEKPLA-----LTLEEAEELVEAAKEK-GVKVMV 118 (120)
T ss_dssp EESSHHHHHHHTTESEEEEESSGG----GHHHHHHHHHHTTS-EEEEESSSS-----SSHHHHHHHHHHHHHH-TSCEEE
T ss_pred chhHHHHHHHhhcCCEEEEecCCc----chHHHHHHHHHcCC-EEEEEcCCc-----CCHHHHHHHHHHHHHh-CCEEEE
Confidence 455566666666666666665532 23444444554333 556565543 2477788999999888 877664
No 445
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=49.63 E-value=1.1e+02 Score=26.57 Aligned_cols=93 Identities=14% Similarity=0.211 Sum_probs=47.8
Q ss_pred HHHHhcCCCCEEEecCC-CCCC-----hHHHHHhcCCeEEEecccCCCCcccCH-----HHHHhhccCCeeEEEEcCCC-
Q 018665 52 AVLAVCSPGDEVIIPAP-FWVS-----YPEMARIADATPVILPTRISENFLLDP-----KVLESKLTEKSRLLILCSPS- 119 (352)
Q Consensus 52 ~~~~l~~~~~~vl~~~~-~~~~-----~~~~~~~~g~~v~~i~~~~~~~~~~d~-----~~l~~~l~~~~~~i~i~~p~- 119 (352)
+...+.+.|.+|++-+. .|.. ....++..|..+...... .|+ +.++....++...|++..|.
T Consensus 92 LA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~~~------~dp~~~~~~~l~~~~~~~~D~ViIDT~G~ 165 (272)
T TIGR00064 92 LANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKEG------ADPAAVAFDAIQKAKARNIDVVLIDTAGR 165 (272)
T ss_pred HHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCCCC------CCHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 33445566666665543 2322 112335556544433221 233 23333344567788887774
Q ss_pred CCcccCCCHHHHHHHHHHHH------hCCCEEEEecccc
Q 018665 120 NPTGSVYPKNLLDEIARIVA------KHPRLLVLSDEIY 152 (352)
Q Consensus 120 nptG~~~~~~~l~~l~~~~~------~~~~~~livD~~~ 152 (352)
++. ...-.++++++.+.+. .. ++++++|...
T Consensus 166 ~~~-d~~~~~el~~~~~~~~~~~~~~~~-~~~LVl~a~~ 202 (272)
T TIGR00064 166 LQN-KVNLMDELKKIKRVIKKVDKDAPD-EVLLVLDATT 202 (272)
T ss_pred Ccc-hHHHHHHHHHHHHHHhcccCCCCc-eEEEEEECCC
Confidence 332 1122335667777776 56 7888888763
No 446
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=49.43 E-value=1.2e+02 Score=26.43 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=19.3
Q ss_pred cccCCCHHHHHHHHHHHHh----CCCEEEEeccccc
Q 018665 122 TGSVYPKNLLDEIARIVAK----HPRLLVLSDEIYE 153 (352)
Q Consensus 122 tG~~~~~~~l~~l~~~~~~----~~~~~livD~~~~ 153 (352)
||+.-+.+..+.++++.++ +|++++++|=+.+
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMG 114 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMG 114 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCccc
Confidence 5666666666666665543 3566666665554
No 447
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=49.24 E-value=91 Score=21.96 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=42.1
Q ss_pred CCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 70 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 70 ~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
...+...++..|.+.... ..+++..-....+...+. ++.+|++..-. .+-+-...+.+.|+++ |++++
T Consensus 12 ~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~-~aD~VIv~t~~------vsH~~~~~vk~~akk~-~ip~~ 79 (97)
T PF10087_consen 12 ERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIK-KADLVIVFTDY------VSHNAMWKVKKAAKKY-GIPII 79 (97)
T ss_pred HHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcC-CCCEEEEEeCC------cChHHHHHHHHHHHHc-CCcEE
Confidence 345778889999998888 212332223334777665 45555442221 1223377888899999 99888
No 448
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=49.22 E-value=70 Score=27.77 Aligned_cols=81 Identities=11% Similarity=0.213 Sum_probs=57.9
Q ss_pred CCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 018665 60 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVA 139 (352)
Q Consensus 60 ~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~ 139 (352)
+..-+.--|.|.....+.+..+.++..+-++.. .-.|.+.++++...+++++..-+ .|..+.-++.+.++
T Consensus 44 gG~~~~g~PVf~tV~EA~~~~~a~~svI~Vp~~----~aadai~EAida~i~liv~ITEg------IP~~D~~~~~~~a~ 113 (293)
T COG0074 44 GGQTILGLPVFNTVEEAVKETGANASVIFVPPP----FAADAILEAIDAGIKLVVIITEG------IPVLDMLELKRYAR 113 (293)
T ss_pred CceEEcCccHHHHHHHHHHhhCCCEEEEecCcH----HHHHHHHHHHhCCCcEEEEEeCC------CCHHHHHHHHHHHH
Confidence 344555578888888899888777666655532 35788888888777877766555 34566888889999
Q ss_pred hCCCEEEEeccc
Q 018665 140 KHPRLLVLSDEI 151 (352)
Q Consensus 140 ~~~~~~livD~~ 151 (352)
+. ++.+|-=++
T Consensus 114 ~~-g~~iiGPnc 124 (293)
T COG0074 114 EK-GTRLIGPNC 124 (293)
T ss_pred hc-CCEEECCCC
Confidence 99 988884333
No 449
>PRK05638 threonine synthase; Validated
Probab=48.98 E-value=1.4e+02 Score=28.01 Aligned_cols=54 Identities=9% Similarity=0.019 Sum_probs=37.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 35 TPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
....|+..++|-.+...+..+. .+-.-.|++|...-..-...++..|.+++.++
T Consensus 111 g~~~vv~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 111 AANGFIVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred CCCEEEEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 3456777777777776665543 34345677777655556678899999999986
No 450
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=48.62 E-value=1e+02 Score=22.46 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=36.1
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
..++..|.++..+..+ +.++++.+.+. .++.+|.++..... ....++++++.+++.
T Consensus 21 ~~l~~~G~~V~~lg~~------~~~~~l~~~~~~~~pdvV~iS~~~~~-----~~~~~~~~i~~l~~~ 77 (119)
T cd02067 21 RALRDAGFEVIDLGVD------VPPEEIVEAAKEEDADAIGLSGLLTT-----HMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHHcCCCEEEEeccccc-----cHHHHHHHHHHHHHc
Confidence 5667889998666422 56777766664 57777777555322 234477777777766
No 451
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=48.19 E-value=1.7e+02 Score=25.54 Aligned_cols=68 Identities=10% Similarity=0.162 Sum_probs=40.3
Q ss_pred cCHHHHHhhccC-CeeEEEEcCC-CCCcccCCCH--------HHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 97 LDPKVLESKLTE-KSRLLILCSP-SNPTGSVYPK--------NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 97 ~d~~~l~~~l~~-~~~~i~i~~p-~nptG~~~~~--------~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
.|++.+.+.+++ +|.+||-+.. ++...--..+ .--..++++|++. |..+|-=. .+..|+|....++.
T Consensus 37 td~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-ga~lVhiS--TDyVFDG~~~~~Y~ 113 (281)
T COG1091 37 TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-GARLVHIS--TDYVFDGEKGGPYK 113 (281)
T ss_pred cChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-CCeEEEee--cceEecCCCCCCCC
Confidence 477888888865 5777765554 3333322221 2356788999999 98887322 24456666544444
Q ss_pred c
Q 018665 167 S 167 (352)
Q Consensus 167 ~ 167 (352)
.
T Consensus 114 E 114 (281)
T COG1091 114 E 114 (281)
T ss_pred C
Confidence 3
No 452
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=47.75 E-value=1.2e+02 Score=26.31 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=42.1
Q ss_pred CcEEEeCChHHHH-HHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCCCCcccCHHHHHhhccCC--
Q 018665 37 DQILVSNGAKQSI-LQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEK-- 109 (352)
Q Consensus 37 ~~i~~~~g~~~a~-~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~-- 109 (352)
..+++| |+|++| ....+.|.++|.++++..=.-....... +..|.++..++.|..+. -+.+.+.+.+..+
T Consensus 7 ~~~lIT-GASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~--~~~~~l~~~l~~~~~ 83 (265)
T COG0300 7 KTALIT-GASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP--EALERLEDELKERGG 83 (265)
T ss_pred cEEEEE-CCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh--hHHHHHHHHHHhcCC
Confidence 444554 445555 4455567777766555443333333332 34567777777764332 2455555555443
Q ss_pred eeEEEEcCCC
Q 018665 110 SRLLILCSPS 119 (352)
Q Consensus 110 ~~~i~i~~p~ 119 (352)
..-++|+|..
T Consensus 84 ~IdvLVNNAG 93 (265)
T COG0300 84 PIDVLVNNAG 93 (265)
T ss_pred cccEEEECCC
Confidence 3445556664
No 453
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=47.64 E-value=1.2e+02 Score=22.92 Aligned_cols=56 Identities=7% Similarity=-0.083 Sum_probs=39.2
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhc-cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
..++..|++|+.+..+ ..++++.++. +.++.+|.++.....+ .+.++++.+.+++.
T Consensus 21 ~~L~~~GfeVidLG~~------v~~e~~v~aa~~~~adiVglS~L~t~~-----~~~~~~~~~~l~~~ 77 (128)
T cd02072 21 HAFTEAGFNVVNLGVL------SPQEEFIDAAIETDADAILVSSLYGHG-----EIDCKGLREKCDEA 77 (128)
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHHcCCCEEEEeccccCC-----HHHHHHHHHHHHHC
Confidence 5778899999888654 4677766655 4577888776655332 34478888888877
No 454
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=47.38 E-value=1.9e+02 Score=25.16 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=36.7
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEeccc
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 90 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~ 90 (352)
..|+-.+++..+...+..+- .+-.-.|+++...-..-...++..|.+++.++-+
T Consensus 54 ~~vv~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 54 TTIIEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 45666677766666555542 3333567777665666678899999999999854
No 455
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=46.43 E-value=36 Score=30.75 Aligned_cols=64 Identities=13% Similarity=0.111 Sum_probs=41.6
Q ss_pred HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 74 PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
.+.+...+.++.-+.+.++.+|.+....+-+.-... ....+..++.+++++|++.|+++ ++-||
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~r-gI~vI 87 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLR-GIRVI 87 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHc-CCEEE
Confidence 345556677777777765566665544333222111 11235668899999999999999 98877
No 456
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=46.28 E-value=1e+02 Score=23.46 Aligned_cols=57 Identities=9% Similarity=-0.069 Sum_probs=40.3
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhc-cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 143 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~ 143 (352)
..++..|++|+....+ ..++++.++. +.++.+|.++.-...+ .+.++++.+.+++. +
T Consensus 23 ~~l~~~GfeVi~LG~~------v~~e~~v~aa~~~~adiVglS~l~~~~-----~~~~~~~~~~l~~~-g 80 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVL------SPQEEFIKAAIETKADAILVSSLYGHG-----EIDCKGLRQKCDEA-G 80 (134)
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHHcCCCEEEEecccccC-----HHHHHHHHHHHHHC-C
Confidence 5778899999888754 4677776655 4578888876665322 33488888888877 5
No 457
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=46.05 E-value=29 Score=33.92 Aligned_cols=33 Identities=9% Similarity=0.029 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 127 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 127 ~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
++++++++++.|++. |+-||+|-++.+|.-++.
T Consensus 212 tPedfk~fVD~aH~~-GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 212 TPEDFKALVDAAHQA-GIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CHHHHHHHHHHHHHc-CCEEEEEecCCcCCCCcc
Confidence 577899999999999 999999999998765543
No 458
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=45.26 E-value=1.2e+02 Score=24.61 Aligned_cols=111 Identities=12% Similarity=0.092 Sum_probs=45.8
Q ss_pred HHHHHHHHhcCCCCC-C--CcEEEeCChHH---HHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhc--CCeEEEeccc
Q 018665 21 QQFVINLKENGLSYT-P--DQILVSNGAKQ---SILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIA--DATPVILPTR 90 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~--~~i~~~~g~~~---a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~--g~~v~~i~~~ 90 (352)
+.+.+.++....... . .-|.+...+-+ +..-++..+.+ ++-+|+++..+-.+...+.+.. ...+.++|.|
T Consensus 3 ~~~~eR~g~~~~~~~~~~~~~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P~D 82 (186)
T PF04413_consen 3 KRLKERLGFYPPPPPRKPGPLIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLPLD 82 (186)
T ss_dssp --HHHHHS--GGGGGGT--T-EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE---S
T ss_pred CChHHhcCCCCCCCCCCCCCcEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeCcc
Confidence 566666662222211 1 55666544433 33344445554 4678999888877776555442 4566666653
Q ss_pred CCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 91 ISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 91 ~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
.+-.+.+.++. +++++++.. .|-+-.++..|++. |+.++.=
T Consensus 83 -------~~~~~~rfl~~~~P~~~i~~E----------tElWPnll~~a~~~-~ip~~Lv 124 (186)
T PF04413_consen 83 -------FPWAVRRFLDHWRPDLLIWVE----------TELWPNLLREAKRR-GIPVVLV 124 (186)
T ss_dssp -------SHHHHHHHHHHH--SEEEEES--------------HHHHHH------S-EEEE
T ss_pred -------CHHHHHHHHHHhCCCEEEEEc----------cccCHHHHHHHhhc-CCCEEEE
Confidence 23344444432 455544321 23355788888888 8765533
No 459
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=44.23 E-value=2.4e+02 Score=25.40 Aligned_cols=107 Identities=13% Similarity=0.132 Sum_probs=59.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEE--ecCCCCCC------hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVI--IPAPFWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl--~~~~~~~~------~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
-+.++..+||-.+...+......-|.+++ ..++.+.. ....++..|++...+.+ |.+.+.+...
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHH
Confidence 46788889988877655333222233333 44555542 33455668988877765 3333333222
Q ss_pred CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 108 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 108 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
.... +..+|...+ .......+.++|+++ |+.+|++.....-.+
T Consensus 132 ~~~~-----~~~~pc~~c-~~~~~~~l~~~A~~~-gi~~Il~G~~~dE~f 174 (343)
T TIGR03573 132 AYFK-----KVGDPEWPQ-DHAIFASVYQVALKF-NIPLIIWGENIAEEY 174 (343)
T ss_pred HHHh-----ccCCCchhh-hhHHHHHHHHHHHHh-CCCEEEeCCCHHHhc
Confidence 1111 222333222 123367888999999 999998876654333
No 460
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=43.80 E-value=1.2e+02 Score=29.04 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=42.1
Q ss_pred HHHhcC-CeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh-CCCEEEEecccc
Q 018665 76 MARIAD-ATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIY 152 (352)
Q Consensus 76 ~~~~~g-~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~livD~~~ 152 (352)
.++..| .+|..++...+ .++.+++.+.+. .++.+|.++... .......++++.+++ +|++.+|+=..+
T Consensus 31 ~L~~~G~~~V~iiD~~~~---~~~~~~~~~~l~~~~pdvVgis~~t------~~~~~a~~~~~~~k~~~P~~~iV~GG~h 101 (497)
T TIGR02026 31 ALLDAGYHDVTFLDAMTG---PLTDEKLVERLRAHCPDLVLITAIT------PAIYIACETLKFARERLPNAIIVLGGIH 101 (497)
T ss_pred HHHhcCCcceEEeccccc---CCCHHHHHHHHHhcCcCEEEEecCc------ccHHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 456778 68888876532 256677777664 367777764321 233346677777764 367777755443
No 461
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=43.75 E-value=63 Score=25.92 Aligned_cols=100 Identities=9% Similarity=0.125 Sum_probs=59.4
Q ss_pred CChHHHHHHHHHHhcCCCCEEEecCCCCC-Ch--HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCC
Q 018665 43 NGAKQSILQAVLAVCSPGDEVIIPAPFWV-SY--PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 119 (352)
Q Consensus 43 ~g~~~a~~~~~~~l~~~~~~vl~~~~~~~-~~--~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~ 119 (352)
+|=|..+...+..+...+.++++..|... .+ .....+.|.....+..+ . -++.++.+.+..++..|++...+
T Consensus 12 sGKS~eLi~~~~~~~~~~~~v~~~kp~~D~R~~~~~I~s~~g~~~~~~~~~--~---~~~~~~~~~~~~~~dvI~IDEaQ 86 (176)
T PF00265_consen 12 SGKSTELIRRIHRYEIAGKKVLVFKPAIDTRYGEDKIVSHDGISLEAIVDP--I---DNLFEIIDILENDYDVIGIDEAQ 86 (176)
T ss_dssp SSHHHHHHHHHHHHHHTT-EEEEEEESTSCCCCSSEEEHTTSCEEEEESSE--E---SSGGGGGGGCCTTCSEEEESSGG
T ss_pred ChhHHHHHHHHHHHHhCCCeEEEEEecccCcCCCCeEEecCCCcccccccc--h---hhHHHHHHHhccCCCEEEEechH
Confidence 44444444455545455677887766432 11 12445667766666111 1 24566666666668888887776
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 120 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 120 nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
. ++ +++.++++.+..+ |+.+++=.-..+
T Consensus 87 F-----f~-~~i~~l~~~~~~~-g~~Vi~~GL~~d 114 (176)
T PF00265_consen 87 F-----FD-EQIVQLVEILANK-GIPVICAGLDTD 114 (176)
T ss_dssp G-----ST-TTHHHHHHHHHHT-T-EEEEEEESB-
T ss_pred h-----hH-HHHHHHHHHHHhC-CCeEEEEeeCCc
Confidence 5 44 4588899999999 999997655444
No 462
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=43.16 E-value=2e+02 Score=24.71 Aligned_cols=100 Identities=14% Similarity=0.035 Sum_probs=57.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecC--CCCCCh--HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCee
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPA--PFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 111 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~--~~~~~~--~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~ 111 (352)
.+++++|-|.+..+..++... +++.+|++.+ |.+.+. ...+...|+++..++-. ..-.+. ++..
T Consensus 86 ~~dvILT~s~S~~v~~~l~~~-~~~~~V~v~ESrP~~eG~~~a~~L~~~GI~vtli~Ds-------a~~~~m----~~vd 153 (253)
T PRK06372 86 NDSVIGTISSSQVLKAFISSS-EKIKSVYILESRPMLEGIDMAKLLVKSGIDVVLLTDA-------SMCEAV----LNVD 153 (253)
T ss_pred CCCEEEEeCCcHHHHHHHHhc-CCCCEEEEecCCCchHHHHHHHHHHHCCCCEEEEehh-------HHHHHH----HhCC
Confidence 346999988887777776543 3334666654 544432 24455678888777521 112222 2344
Q ss_pred EEEEcC-CCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 112 LLILCS-PSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 112 ~i~i~~-p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.+++-. .-...|.+...---.-++-.|+.+ ++++++
T Consensus 154 ~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~-~vPv~V 190 (253)
T PRK06372 154 AVIVGSDSVLYDGGLIHKNGTFPLALCARYL-KKPFYS 190 (253)
T ss_pred EEEECccEEecCCCEeehhhHHHHHHHHHHc-CCCEEE
Confidence 444422 112345554444455677778899 999887
No 463
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=42.87 E-value=56 Score=29.00 Aligned_cols=61 Identities=10% Similarity=0.140 Sum_probs=38.3
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+.+...+.++.-+.+.++.+|.+....+-+.-... ..|..++.+++++|.+.|+++ |+-||
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~r-gI~vI 85 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDR-GIRVV 85 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHc-CCEEE
Confidence 44455677777776655555554433322211100 135568999999999999999 99777
No 464
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=42.36 E-value=2.4e+02 Score=24.88 Aligned_cols=103 Identities=11% Similarity=0.135 Sum_probs=56.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCC--CEEEecC--CCCCCh--HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPA--PFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTE 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~--~~vl~~~--~~~~~~--~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~ 108 (352)
....+++|-|.+.....++..+.+.| -+|++.. |.+.+. ...+...|+++..++-. ....+.+
T Consensus 114 ~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~Ds-------a~~~~m~---- 182 (301)
T TIGR00511 114 RDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVDS-------AVRYFMK---- 182 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEehh-------HHHHHHH----
Confidence 45667888776666666666554333 3455443 444442 34556789998888621 1222222
Q ss_pred CeeEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 109 KSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 109 ~~~~i~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
+...+++ ...-...|.+...---.-++-.|+.+ ++++++=
T Consensus 183 ~vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~-~vPv~V~ 223 (301)
T TIGR00511 183 EVDHVVVGADAITANGALINKIGTSQLALAAREA-RVPFMVA 223 (301)
T ss_pred hCCEEEECccEEecCCCEEEHHhHHHHHHHHHHh-CCCEEEE
Confidence 2334443 11122334444444455677788888 8888753
No 465
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=42.24 E-value=97 Score=25.38 Aligned_cols=97 Identities=7% Similarity=0.098 Sum_probs=46.6
Q ss_pred CChHHHHHHHHHHhcCCCCEEEecCCCCCC---hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCC
Q 018665 43 NGAKQSILQAVLAVCSPGDEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSP 118 (352)
Q Consensus 43 ~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~---~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p 118 (352)
+|=|+.+...+....-.|.+|++..|.... ......+.|.+...+.++.+.+ =.+.+.+.-.. .+..|.+...
T Consensus 15 SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~~i~~~~~---i~~~i~~~~~~~~~~~v~IDEa 91 (201)
T COG1435 15 SGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSSRIGLSSEAVVIPSDTD---IFDEIAALHEKPPVDCVLIDEA 91 (201)
T ss_pred CcchHHHHHHHHHHHHcCCeEEEEecccccccccceeeeccCCcccceecCChHH---HHHHHHhcccCCCcCEEEEehh
Confidence 455555555555555566778877775432 2233445555554444431110 01111111110 1345555444
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 119 SNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 119 ~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
+. ++.+-+..+.+++.+. |+++|+
T Consensus 92 QF-----~~~~~v~~l~~lad~l-gi~Vi~ 115 (201)
T COG1435 92 QF-----FDEELVYVLNELADRL-GIPVIC 115 (201)
T ss_pred Hh-----CCHHHHHHHHHHHhhc-CCEEEE
Confidence 43 4455566666666666 666663
No 466
>PRK09354 recA recombinase A; Provisional
Probab=42.05 E-value=96 Score=28.04 Aligned_cols=24 Identities=8% Similarity=0.037 Sum_probs=15.4
Q ss_pred ChHHHHHHHHHccCEEeccCCCCCC
Q 018665 293 NSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
....+.+... +.||.-.+|++|..
T Consensus 271 ~~~~~~d~a~-~~g~i~k~g~w~~~ 294 (349)
T PRK09354 271 REGELIDLGV-ELGIIEKSGAWYSY 294 (349)
T ss_pred hhhhHHHHHH-hCCcEEcccCEEEE
Confidence 3455655544 45888888877754
No 467
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=41.76 E-value=99 Score=26.25 Aligned_cols=15 Identities=27% Similarity=0.328 Sum_probs=7.9
Q ss_pred HHHHHhcCCeEEEec
Q 018665 74 PEMARIADATPVILP 88 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~ 88 (352)
...+...|++-..+|
T Consensus 97 i~~~~~aG~~giiip 111 (242)
T cd04724 97 LRDAKEAGVDGLIIP 111 (242)
T ss_pred HHHHHHCCCcEEEEC
Confidence 444555666555553
No 468
>PRK08638 threonine dehydratase; Validated
Probab=41.45 E-value=2.6e+02 Score=25.04 Aligned_cols=52 Identities=12% Similarity=0.005 Sum_probs=36.4
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
..|+-.+++..+...+..+. .+-.-.|++|......-...++..|.+++.++
T Consensus 76 ~~vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 76 KGVVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred CeEEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 45777777777777666653 33335677777666566678899999998875
No 469
>cd06320 PBP1_allose_binding Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. The members of this group are belonging to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Like other periplasmic receptors of the ABC-type transport systems, the allose-binding protein consists of two alpha/beta domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding.
Probab=41.37 E-value=62 Score=27.54 Aligned_cols=65 Identities=12% Similarity=0.044 Sum_probs=34.8
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..++..|..+.....+...+...-.+.++..+..++.++++....++ .+.+.++.++++ ++++|.
T Consensus 23 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~--------~~~~~~~~~~~~-~iPvV~ 87 (275)
T cd06320 23 NEAKKLGVSVDIQAAPSEGDQQGQLSIAENMINKGYKGLLFSPISDV--------NLVPAVERAKKK-GIPVVN 87 (275)
T ss_pred HHHHHhCCeEEEEccCCCCCHHHHHHHHHHHHHhCCCEEEECCCChH--------HhHHHHHHHHHC-CCeEEE
Confidence 55667898888776542222111123344555567788776432211 123344555677 887763
No 470
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=41.34 E-value=69 Score=28.96 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=36.1
Q ss_pred CHHHHHhhccCCeeEEEEcCC-CCCcccC--CCHHHHHHHHHHHHhCCCEEE
Q 018665 98 DPKVLESKLTEKSRLLILCSP-SNPTGSV--YPKNLLDEIARIVAKHPRLLV 146 (352)
Q Consensus 98 d~~~l~~~l~~~~~~i~i~~p-~nptG~~--~~~~~l~~l~~~~~~~~~~~l 146 (352)
+++.+..+++....+|++-.. .|..+.. ++.+++++.+++|+++ |.-+
T Consensus 15 ~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~-gkk~ 65 (347)
T COG0826 15 NLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSA-GKKV 65 (347)
T ss_pred CHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHc-CCeE
Confidence 678888888777788888666 4444444 8888899999999998 8733
No 471
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=41.32 E-value=2.1e+02 Score=23.81 Aligned_cols=93 Identities=10% Similarity=0.149 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCC--CCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-------CCeeEEEEc
Q 018665 46 KQSILQAVLAVCSPGDEVIIPAPF--WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-------EKSRLLILC 116 (352)
Q Consensus 46 ~~a~~~~~~~l~~~~~~vl~~~~~--~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-------~~~~~i~i~ 116 (352)
..++..++..+.+.| -..+.+-+ ..-....++..|.......+..++. .|.+.+++.++ ++-.+|.+.
T Consensus 105 ~~~m~~vl~~l~~~g-l~FvDS~T~~~s~a~~~A~~~gvp~~~rdvfLD~~--~~~~~I~~ql~~~~~~A~~~G~aI~Ig 181 (213)
T PF04748_consen 105 REAMRWVLEVLKERG-LFFVDSRTTPRSVAPQVAKELGVPAARRDVFLDND--QDEAAIRRQLDQAARIARKQGSAIAIG 181 (213)
T ss_dssp HHHHHHHHHHHHHTT--EEEE-S--TT-SHHHHHHHCT--EEE-SEETTST---SHHHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCCCcccHHHHHHHHcCCCEEeeceecCCC--CCHHHHHHHHHHHHHhhhhcCcEEEEE
Confidence 345666666666554 33443322 2234478889999888887765544 67777777663 355677888
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 117 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 117 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+|+..| .+.++++..-.++. |+-++
T Consensus 182 h~~p~T-----l~~L~~~~~~l~~~-gi~lV 206 (213)
T PF04748_consen 182 HPRPET-----LEALEEWLPELEAQ-GIELV 206 (213)
T ss_dssp E-SCCH-----HHHHHHHHHHHHHC-TEEE-
T ss_pred cCCHHH-----HHHHHHHHhHHhhC-CEEEE
Confidence 887654 34466666655677 77665
No 472
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=41.00 E-value=1.9e+02 Score=23.29 Aligned_cols=89 Identities=11% Similarity=0.060 Sum_probs=45.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCC-hHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh----cCCeEEEecccCCCCc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNG-AKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g-~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~----~g~~v~~i~~~~~~~~ 95 (352)
+.+.+.+.+++..++...+++..+ +..+ ..+...+.+.+.+|.+............+. .+.++...+.
T Consensus 13 ~~~~~~l~~~~~~l~~~~vlVlGgtG~iG-~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~------ 85 (194)
T cd01078 13 AAAGKALELMGKDLKGKTAVVLGGTGPVG-QRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVET------ 85 (194)
T ss_pred HHHHHHHHHhCcCCCCCEEEEECCCCHHH-HHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeC------
Confidence 555566666676677777777754 4333 334455556666777665443222222222 2444443322
Q ss_pred ccCHHHHHhhccCCeeEEEEcCC
Q 018665 96 LLDPKVLESKLTEKSRLLILCSP 118 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p 118 (352)
.+.+++.+.++ +..+|+.+.+
T Consensus 86 -~~~~~~~~~~~-~~diVi~at~ 106 (194)
T cd01078 86 -SDDAARAAAIK-GADVVFAAGA 106 (194)
T ss_pred -CCHHHHHHHHh-cCCEEEECCC
Confidence 25666666664 4455554444
No 473
>PRK11761 cysM cysteine synthase B; Provisional
Probab=40.95 E-value=2.5e+02 Score=24.64 Aligned_cols=53 Identities=17% Similarity=0.249 Sum_probs=38.8
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
..|+-.++|..+...+..+- .+-.-.|++|...-..-...++.+|.+++.++-
T Consensus 64 ~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 64 DTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 56888888888887776664 333346667766555667899999999999984
No 474
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=40.91 E-value=1.6e+02 Score=25.78 Aligned_cols=71 Identities=13% Similarity=0.157 Sum_probs=40.4
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-----C-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLT-----E-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-----~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..++..|+.-..+-.+.- +..+.+++.+..+ . +.-+++.+.|.. ||..++.+ -+.++++++||+.-|=
T Consensus 89 ~~A~~~Gad~v~v~pP~y--~~~~~~~l~~~f~~ia~a~~~lpv~iYn~P~~-tg~~l~~~---~l~~L~~~~pnv~giK 162 (294)
T TIGR02313 89 KFAEEAGADAAMVIVPYY--NKPNQEALYDHFAEVADAVPDFPIIIYNIPGR-AAQEIAPK---TMARLRKDCPNIVGAK 162 (294)
T ss_pred HHHHHcCCCEEEEcCccC--CCCCHHHHHHHHHHHHHhccCCCEEEEeCchh-cCcCCCHH---HHHHHHhhCCCEEEEE
Confidence 344566776666655432 2244455554332 1 344555555554 79999954 4455555667888887
Q ss_pred ccc
Q 018665 149 DEI 151 (352)
Q Consensus 149 D~~ 151 (352)
|..
T Consensus 163 ~ss 165 (294)
T TIGR02313 163 ESN 165 (294)
T ss_pred eCC
Confidence 754
No 475
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=40.85 E-value=1.8e+02 Score=25.00 Aligned_cols=53 Identities=25% Similarity=0.352 Sum_probs=29.8
Q ss_pred hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc---c-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHH
Q 018665 73 YPEMARIADATPVILPTRISENFLLDPKVLESKL---T-EKSRLLILCSPSNPTGSVYPKNLLDEIARIV 138 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l---~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~ 138 (352)
+...++..|+.-..+|- +.+++.++.. + .+...|.++.|+. +.++++.+++.+
T Consensus 109 f~~~~~~aGvdGviipD-------Lp~ee~~~~~~~~~~~gl~~I~lvap~t------~~eri~~i~~~s 165 (258)
T PRK13111 109 FAADAAEAGVDGLIIPD-------LPPEEAEELRAAAKKHGLDLIFLVAPTT------TDERLKKIASHA 165 (258)
T ss_pred HHHHHHHcCCcEEEECC-------CCHHHHHHHHHHHHHcCCcEEEEeCCCC------CHHHHHHHHHhC
Confidence 34566677777666651 2334443333 2 3566777777764 355666666654
No 476
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=40.78 E-value=16 Score=29.33 Aligned_cols=46 Identities=17% Similarity=0.156 Sum_probs=20.7
Q ss_pred ChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 44 GAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 44 g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
|=|.++-.++..+...+ .+|+++.|...+....++........+..
T Consensus 9 GKSa~lGl~~a~l~~~~~~~I~vtAP~~~~~~~lf~~~~~~l~~~~~ 55 (177)
T PF05127_consen 9 GKSAALGLAAAALIQKGKIRILVTAPSPENVQTLFEFAEKGLKALGY 55 (177)
T ss_dssp SHHHHHHHCCCCSSS-----EEEE-SS--S-HHHHHCC---------
T ss_pred CHHHHHHHHHHHHHHhcCceEEEecCCHHHHHHHHHHHHhhcccccc
Confidence 44555555555555555 48999999999999888877655544443
No 477
>PRK06721 threonine synthase; Reviewed
Probab=40.48 E-value=2.8e+02 Score=25.07 Aligned_cols=52 Identities=15% Similarity=0.055 Sum_probs=31.7
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCC-CCChHHHHHhcCCeEEEec
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF-WVSYPEMARIADATPVILP 88 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~-~~~~~~~~~~~g~~v~~i~ 88 (352)
..|+-.++|..+...+..+- .+-.-.|++|... ...-...++..|.+++.++
T Consensus 76 ~~vV~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~ 129 (352)
T PRK06721 76 EAIICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIE 129 (352)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEEC
Confidence 45655566666665444432 2322456666553 3345567889999999887
No 478
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=40.47 E-value=2.4e+02 Score=26.17 Aligned_cols=113 Identities=12% Similarity=0.128 Sum_probs=61.7
Q ss_pred HHHHHHHHhcCCCCCC--CcEEEeCCh---HHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhcC--CeEEEecccC
Q 018665 21 QQFVINLKENGLSYTP--DQILVSNGA---KQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIAD--ATPVILPTRI 91 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~--~~i~~~~g~---~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~g--~~v~~i~~~~ 91 (352)
+.+.+.++.......+ .-|.+...+ +-+..-+++.+.+ |+-++++++.+-.+...+.+.++ +...++|+|
T Consensus 32 ~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D- 110 (419)
T COG1519 32 KRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD- 110 (419)
T ss_pred HHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC-
Confidence 5566666522222233 445554333 3344444555543 46789999888888888888887 466667654
Q ss_pred CCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 92 SENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
.+..+.+.++ -+++++++.. .|-+--++.-|++. ++++++=++
T Consensus 111 ------~~~~v~rFl~~~~P~l~Ii~E----------tElWPnli~e~~~~-~~p~~LvNa 154 (419)
T COG1519 111 ------LPIAVRRFLRKWRPKLLIIME----------TELWPNLINELKRR-GIPLVLVNA 154 (419)
T ss_pred ------chHHHHHHHHhcCCCEEEEEe----------ccccHHHHHHHHHc-CCCEEEEee
Confidence 2333444442 2555554422 12233566666677 776665544
No 479
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=40.41 E-value=2.9e+02 Score=25.27 Aligned_cols=84 Identities=15% Similarity=0.050 Sum_probs=48.4
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEE
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 115 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i 115 (352)
..|+-.++|..++..+..+- .+-.-.|+++...-..-...++.+|.+++.++... +..-..++.++.+++++..+++
T Consensus 112 ~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~--~~~~~~~~a~~l~~~~~~~~~~ 189 (368)
T PLN02556 112 TTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTK--GMGGTVKKAYELLESTPDAFML 189 (368)
T ss_pred CEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCC--CccHHHHHHHHHHHhcCCCCcc
Confidence 35666677777776666553 33334566666555556688999999999987421 1112334444444444445554
Q ss_pred cCCCCCc
Q 018665 116 CSPSNPT 122 (352)
Q Consensus 116 ~~p~npt 122 (352)
.+-+||.
T Consensus 190 ~q~~np~ 196 (368)
T PLN02556 190 QQFSNPA 196 (368)
T ss_pred CCCCCHH
Confidence 4445654
No 480
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=40.33 E-value=74 Score=28.39 Aligned_cols=24 Identities=4% Similarity=0.086 Sum_probs=16.2
Q ss_pred ChHHHHHHHHHccCEEeccCCCCCC
Q 018665 293 NSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
....+.+... +.|+.-.+|++|..
T Consensus 266 ~~~~~~~~a~-~~g~i~k~g~w~~~ 289 (321)
T TIGR02012 266 KLGEIIDLAV-ELDIIKKAGSWYSY 289 (321)
T ss_pred hhhHHHHHHH-hCCcEEcccCEEEE
Confidence 4556666544 46999889887754
No 481
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=40.23 E-value=2.4e+02 Score=24.66 Aligned_cols=53 Identities=13% Similarity=0.186 Sum_probs=37.6
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
..|+-.++|..+...+..+- .+-.-.|++|...-..-...++.+|.+++.++-
T Consensus 60 ~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 60 DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CEEEEECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 55777788877777666553 333346667666555667899999999999874
No 482
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=39.83 E-value=2.1e+02 Score=23.42 Aligned_cols=39 Identities=8% Similarity=0.112 Sum_probs=24.4
Q ss_pred HHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 101 VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 101 ~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
.++...+++-.+++++.. |.. +.+.++++.++++ |+.+|
T Consensus 102 ql~~~~~~gDvli~iS~S----G~s---~~v~~a~~~Ak~~-G~~vI 140 (196)
T PRK10886 102 QVRALGHAGDVLLAISTR----GNS---RDIVKAVEAAVTR-DMTIV 140 (196)
T ss_pred HHHHcCCCCCEEEEEeCC----CCC---HHHHHHHHHHHHC-CCEEE
Confidence 344444444444555443 222 2389999999999 99988
No 483
>PLN02565 cysteine synthase
Probab=39.83 E-value=2.7e+02 Score=24.78 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=36.9
Q ss_pred cEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 38 QILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
.|+-.++|..+...+..+- .+-.-.|++|...-..-...++.+|.+++.++-
T Consensus 69 ~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 69 VLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 3666677777777666553 333346777777676777899999999998753
No 484
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=39.76 E-value=3.2e+02 Score=26.77 Aligned_cols=100 Identities=12% Similarity=0.111 Sum_probs=61.4
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEec-CCCCCCh------HHHHHhcCC-eE-EEecccCCCCcccCHHHHHhhccCCeeE
Q 018665 42 SNGAKQSILQAVLAVCSPGDEVIIP-APFWVSY------PEMARIADA-TP-VILPTRISENFLLDPKVLESKLTEKSRL 112 (352)
Q Consensus 42 ~~g~~~a~~~~~~~l~~~~~~vl~~-~~~~~~~------~~~~~~~g~-~v-~~i~~~~~~~~~~d~~~l~~~l~~~~~~ 112 (352)
-.+-..|...+..++.+. .+|++. +..-.+. ...++..|. .+ .++|-...++|+++.+.+++....+..+
T Consensus 52 l~~m~~a~~ri~~ai~~~-e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~~L 130 (575)
T PRK11070 52 LSGIEKAVELLYNALREG-TRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGAQL 130 (575)
T ss_pred hhCHHHHHHHHHHHHHCC-CEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCCCE
Confidence 356666666666666554 566655 3333332 245677887 34 4667666788999999999887767777
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 113 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 113 i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
+|.+... ++ . . +.++.|++. |+-+|+=+.|
T Consensus 131 iItvD~G--i~---~---~-e~i~~a~~~-gidvIVtDHH 160 (575)
T PRK11070 131 IVTVDNG--IS---S---H-AGVAHAHAL-GIPVLVTDHH 160 (575)
T ss_pred EEEEcCC--cC---C---H-HHHHHHHHC-CCCEEEECCC
Confidence 6654332 11 2 3 334557788 8866665544
No 485
>PRK07476 eutB threonine dehydratase; Provisional
Probab=39.73 E-value=2.7e+02 Score=24.72 Aligned_cols=51 Identities=10% Similarity=-0.000 Sum_probs=35.1
Q ss_pred EEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 39 ILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
|+..++|..+...+..+- ++-.-.|+++...-..-...++.+|.+++.++-
T Consensus 70 vv~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T PRK07476 70 VVTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGR 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 777777777776666553 333345666666555666788999999998873
No 486
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=39.57 E-value=87 Score=27.87 Aligned_cols=77 Identities=6% Similarity=0.143 Sum_probs=50.5
Q ss_pred cCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHH-HhCCCE
Q 018665 66 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV-AKHPRL 144 (352)
Q Consensus 66 ~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~-~~~~~~ 144 (352)
--|+|.+..++.+..++++..+-++.. .-++.++++++.+.+++++..-..|- .+..++.+++ +++ ++
T Consensus 73 Gvpvy~sv~ea~~~~~~D~avI~VPa~----~v~dai~Ea~~aGI~~~ViiteGfpe------~d~~~l~~~~~~~~-g~ 141 (317)
T PTZ00187 73 GLPVFATVKEAKKATGADASVIYVPPP----HAASAIIEAIEAEIPLVVCITEGIPQ------HDMVKVKHALLSQN-KT 141 (317)
T ss_pred CccccCCHHHHhcccCCCEEEEecCHH----HHHHHHHHHHHcCCCEEEEECCCCch------hhHHHHHHHHhhcC-CC
Confidence 679999999999885555555544421 36788889888888888776655432 2234444555 458 88
Q ss_pred EEEeccccc
Q 018665 145 LVLSDEIYE 153 (352)
Q Consensus 145 ~livD~~~~ 153 (352)
.+|==++.+
T Consensus 142 rliGPNc~G 150 (317)
T PTZ00187 142 RLIGPNCPG 150 (317)
T ss_pred EEECCCCce
Confidence 888444443
No 487
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=39.44 E-value=1.7e+02 Score=25.80 Aligned_cols=76 Identities=9% Similarity=0.158 Sum_probs=50.0
Q ss_pred EecCCCCCChHHHHHh--cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCC-CcccCCCHHHHHHHHHHHHh
Q 018665 64 IIPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSN-PTGSVYPKNLLDEIARIVAK 140 (352)
Q Consensus 64 l~~~~~~~~~~~~~~~--~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~n-ptG~~~~~~~l~~l~~~~~~ 140 (352)
+.--|+|.+..++... -..-+..+|.. .-++.++++.+.+++.+++..... ..| ..+.+.++|++
T Consensus 52 i~G~~~y~sv~dlp~~~~~DlAvI~vPa~------~v~~al~e~~~~Gvk~~vIisaGf~e~g------~~~~~~~~ar~ 119 (300)
T PLN00125 52 HLGLPVFNTVAEAKAETKANASVIYVPPP------FAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAALNRQ 119 (300)
T ss_pred EcCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHcCCCEEEEECCCCCccc------HHHHHHHHHhh
Confidence 4466788888888765 34445555432 357888888888888777655543 333 24556667899
Q ss_pred CCCEEEEecccc
Q 018665 141 HPRLLVLSDEIY 152 (352)
Q Consensus 141 ~~~~~livD~~~ 152 (352)
+ ++.++-=++.
T Consensus 120 ~-girviGPNc~ 130 (300)
T PLN00125 120 S-KTRLIGPNCP 130 (300)
T ss_pred c-CCEEECCCCc
Confidence 9 9999944443
No 488
>COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis]
Probab=39.27 E-value=2.3e+02 Score=23.81 Aligned_cols=111 Identities=13% Similarity=0.037 Sum_probs=63.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEE-E
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI-L 115 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~-i 115 (352)
.-+.+...+...+..++.-+.+..+-|.+....-.-.+.++....+++...|--...++++|-...+-+.+++.++-+ +
T Consensus 54 ~~i~l~~~s~~~~r~~~~kfr~~~dlI~V~~~~lkv~R~Av~~~rVDil~~p~~~r~~~gldh~~a~laa~~~valeisl 133 (229)
T COG1603 54 RGITLNAESPSQLRRLVKKFRSKVDLIAVEPGSLKVNRAAVENKRVDILSHPETGRKDPGLDHVLARLAAEKGVALEISL 133 (229)
T ss_pred eeEEEecCChHHHHHHHHhhhcceeEEEEccCcHHHHHHHHhccCccEEEcccccCCCccccHHHHHHHHhcCceEEEeh
Confidence 346666777777777777776554555555444444445555555776666643334444554444444455555433 2
Q ss_pred cCCCCCcccC--CCHHHHHHHHHHHHhCCCEEEEe
Q 018665 116 CSPSNPTGSV--YPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 116 ~~p~nptG~~--~~~~~l~~l~~~~~~~~~~~liv 148 (352)
...-...|.. .-...+..+.+++++| ++.+++
T Consensus 134 ~~ll~~~g~~Ra~~l~~lr~~lrl~rk~-~v~ivv 167 (229)
T COG1603 134 RPLLRSSGYRRARLLSFLRSLLRLARKY-DVPIVV 167 (229)
T ss_pred HHhhccchhHHHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 2222223333 3455688888888988 877764
No 489
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=38.72 E-value=83 Score=26.91 Aligned_cols=24 Identities=21% Similarity=0.127 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.+.++++++.|+++ |+.+|+|-..
T Consensus 61 ~~~ld~~v~~a~~~-gi~vild~h~ 84 (281)
T PF00150_consen 61 LARLDRIVDAAQAY-GIYVILDLHN 84 (281)
T ss_dssp HHHHHHHHHHHHHT-T-EEEEEEEE
T ss_pred HHHHHHHHHHHHhC-CCeEEEEecc
Confidence 34699999999999 9999998654
No 490
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=38.26 E-value=1.5e+02 Score=25.26 Aligned_cols=98 Identities=16% Similarity=0.231 Sum_probs=55.0
Q ss_pred CcEEEeCChHHHH-HHHHHHhcCCCCEEEecCCCCCChHHHHHhcC-CeEEEecccCCCCcccCHHHHHhhcc---C--C
Q 018665 37 DQILVSNGAKQSI-LQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD-ATPVILPTRISENFLLDPKVLESKLT---E--K 109 (352)
Q Consensus 37 ~~i~~~~g~~~a~-~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g-~~v~~i~~~~~~~~~~d~~~l~~~l~---~--~ 109 (352)
..+++..|.++++ ....+.|.+.|-+|++..=--..+..++...+ .++..+.++- -|.+.+++.+. + .
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 3566777777777 55566788888888877666556667777777 3444444431 25555555443 1 2
Q ss_pred eeEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 018665 110 SRLLILCSPSNPTGSVYPKNLLDEIARIVA 139 (352)
Q Consensus 110 ~~~i~i~~p~nptG~~~~~~~l~~l~~~~~ 139 (352)
..-++++|..-.-|..+..-..+++-....
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid 110 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMID 110 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHH
Confidence 223455555433334444334555544443
No 491
>PLN02735 carbamoyl-phosphate synthase
Probab=37.91 E-value=3e+02 Score=29.50 Aligned_cols=117 Identities=9% Similarity=0.102 Sum_probs=69.4
Q ss_pred HHHHHHHHhcCCCCCCC-cEEEeCCh--HHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLKENGLSYTPD-QILVSNGA--KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~-~i~~~~g~--~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+++.+-+-..|..+... .++++-+. ...+..+.+.|.+.|=+|+.+.. +...++..|+++..+.-..++.
T Consensus 956 ~a~~ka~~~~~~~~p~~g~vliSv~d~~K~~~~~~a~~L~~lG~~i~aT~G----Ta~~L~~~Gi~~~~v~~~~~~~--- 1028 (1102)
T PLN02735 956 KAFAKAQIAAGQRLPLSGTVFISLNDLTKPHLVPIARGFLELGFRIVSTSG----TAHFLELAGIPVERVLKLHEGR--- 1028 (1102)
T ss_pred HHHHHHHhcCCCccCCCCeEEEEEecCCchhHHHHHHHHHHCCCEEEEccH----HHHHHHHCCCceEEEeeccCCC---
Confidence 55555444334444433 46665444 45666677777777777777654 4467788999887776443221
Q ss_pred CHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 98 DPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 98 d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
..+.+.++++-.-++++.|+ |......+=..+.+.|-++ +++++.+-
T Consensus 1029 --~~~~~~i~~~~i~~vin~~~---~~~~~~~d~~~iRr~a~~~-~ip~~t~~ 1075 (1102)
T PLN02735 1029 --PHAGDMLANGQIQLMVITSS---GDALDQKDGRQLRRMALAY-KVPIITTV 1075 (1102)
T ss_pred --ccHHHHHHcCCeEEEEECCC---CccccccccHHHHHHHHHc-CCCEEecH
Confidence 33555565555555666664 3221111234677888899 99999664
No 492
>PLN00191 enolase
Probab=37.90 E-value=1.1e+02 Score=28.78 Aligned_cols=98 Identities=16% Similarity=0.050 Sum_probs=56.7
Q ss_pred ChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcc
Q 018665 44 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 123 (352)
Q Consensus 44 g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG 123 (352)
++.+++. .+..+..+-+-+.+++|....-...++..-.. ..+++-.++.+..+++.+++.++.+..-++..-++. .|
T Consensus 296 s~~e~i~-~~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~-~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~q-iG 372 (457)
T PLN00191 296 SGDELID-LYKEFVSDYPIVSIEDPFDQDDWEHWAKLTSL-EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQ-IG 372 (457)
T ss_pred CHHHHHH-HHHHHhhcCCcEEEECCCCcccHHHHHHHHcc-CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccc-cC
Confidence 3344444 44555554456789999865444333332111 223332223333578888888876555445444443 44
Q ss_pred cCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 124 SVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 124 ~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.+.. ..+++++|+++ |+.+++
T Consensus 373 GITe---a~~~a~lA~~~-G~~~~i 393 (457)
T PLN00191 373 TVTE---SIEAVKMSKAA-GWGVMT 393 (457)
T ss_pred CHHH---HHHHHHHHHHC-CCEEEe
Confidence 4444 88899999999 988875
No 493
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=37.60 E-value=66 Score=24.92 Aligned_cols=81 Identities=20% Similarity=0.225 Sum_probs=46.6
Q ss_pred CCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCC----cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHH
Q 018665 58 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN----FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 133 (352)
Q Consensus 58 ~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~----~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~ 133 (352)
.++++|.+-.. +.++...++..+.++..++.+++.. ..+..++-++.+. +..++++ ||..+-.+.+.+
T Consensus 9 ~~~~~V~~VG~-f~P~~~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l~-~aD~vii------TGsTlvN~Ti~~ 80 (147)
T PF04016_consen 9 GPGDKVGMVGY-FQPLVEKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEILP-WADVVII------TGSTLVNGTIDD 80 (147)
T ss_dssp TTTSEEEEES---HCCHHHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHGG-G-SEEEE------ECHHCCTTTHHH
T ss_pred cCCCEEEEEcC-cHHHHHHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHHc-cCCEEEE------EeeeeecCCHHH
Confidence 45677776654 3357778888899999999876221 1122333344443 5556665 333333333999
Q ss_pred HHHHHHhCCCEEEE
Q 018665 134 IARIVAKHPRLLVL 147 (352)
Q Consensus 134 l~~~~~~~~~~~li 147 (352)
|.+.|++. ...++
T Consensus 81 iL~~~~~~-~~vil 93 (147)
T PF04016_consen 81 ILELARNA-REVIL 93 (147)
T ss_dssp HHHHTTTS-SEEEE
T ss_pred HHHhCccC-CeEEE
Confidence 99999855 44444
No 494
>PRK06381 threonine synthase; Validated
Probab=37.56 E-value=2.9e+02 Score=24.43 Aligned_cols=54 Identities=15% Similarity=0.034 Sum_probs=35.1
Q ss_pred CCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 36 PDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
...|+..++|..+...+..+- .+-.-.|+++...-..-...++.+|.+++.++-
T Consensus 63 ~~~lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~ 117 (319)
T PRK06381 63 YSGITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDG 117 (319)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCC
Confidence 356666666666666555443 333346667665545566788999999999973
No 495
>PLN00011 cysteine synthase
Probab=37.19 E-value=3e+02 Score=24.49 Aligned_cols=53 Identities=9% Similarity=0.095 Sum_probs=38.0
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
..|+-.++|..+...+..+- ++-.-.|++|...-..-...++..|.+++.++-
T Consensus 70 ~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 70 STLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred cEEEEeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 46777777777777666553 333356777777666677899999999998873
No 496
>PRK07048 serine/threonine dehydratase; Validated
Probab=36.96 E-value=3e+02 Score=24.41 Aligned_cols=52 Identities=10% Similarity=0.037 Sum_probs=33.8
Q ss_pred CcEEEeCChHHHHHHHHHH-hcCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 37 DQILVSNGAKQSILQAVLA-VCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~-l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
..|+-.++|..+...+..+ .++-.-.|+++......-...++.+|.+++.++
T Consensus 73 ~~vv~aSsGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~ 125 (321)
T PRK07048 73 AGVVTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYD 125 (321)
T ss_pred CcEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEEC
Confidence 4466666666666655544 233334667776655555578889999999887
No 497
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=36.94 E-value=2.3e+02 Score=23.62 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=53.4
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEE----ecC-C---CCC-----ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhh
Q 018665 39 ILVSNGAKQSILQAVLAVCSPGDEVI----IPA-P---FWV-----SYPEMARIADATPVILPTRISENFLLDPKVLESK 105 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l~~~~~~vl----~~~-~---~~~-----~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~ 105 (352)
+++.+||-.+...+.+++.+ .+.+. ++. . .|+ -...+++..|+..+.++++... .-..+++.++
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHHHHHH
Confidence 56778998888887777755 43211 111 1 111 1335778899999988886221 2235667676
Q ss_pred ccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 106 LTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 106 l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+++ +...++ +|-+........+-++|.+. |+..+
T Consensus 81 l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~l-Gl~~~ 115 (218)
T PF01902_consen 81 LKELKVEAVV-------FGDIDSEYQRNWVERVCERL-GLEAV 115 (218)
T ss_dssp HCTC--SEEE---------TTS-HHHHHHHHHHHHHC-T-EEE
T ss_pred HHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHc-CCEEE
Confidence 653 444555 68888777777778888898 87766
No 498
>smart00642 Aamy Alpha-amylase domain.
Probab=36.64 E-value=46 Score=26.40 Aligned_cols=27 Identities=15% Similarity=0.226 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
.++++++++.|+++ |+.+|.|-+..+.
T Consensus 69 ~~d~~~lv~~~h~~-Gi~vilD~V~NH~ 95 (166)
T smart00642 69 MEDFKELVDAAHAR-GIKVILDVVINHT 95 (166)
T ss_pred HHHHHHHHHHHHHC-CCEEEEEECCCCC
Confidence 57899999999999 9999999987653
No 499
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=36.60 E-value=3.1e+02 Score=24.44 Aligned_cols=98 Identities=11% Similarity=0.125 Sum_probs=48.8
Q ss_pred HHHHhcCCCCEEEecC-CCCCC-----hHHHHHhcCCeEEEecccCCCCc-ccCHHHHHhhccCCeeEEEEcCCC-CCcc
Q 018665 52 AVLAVCSPGDEVIIPA-PFWVS-----YPEMARIADATPVILPTRISENF-LLDPKVLESKLTEKSRLLILCSPS-NPTG 123 (352)
Q Consensus 52 ~~~~l~~~~~~vl~~~-~~~~~-----~~~~~~~~g~~v~~i~~~~~~~~-~~d~~~l~~~l~~~~~~i~i~~p~-nptG 123 (352)
+...+...+.+|++-+ ..|.. ........+..+...+.. .+. ..-.+.+......+...|++.+|. ++.-
T Consensus 134 LA~~l~~~g~~V~Li~~D~~r~~a~eql~~~a~~~~i~~~~~~~~--~dpa~~v~~~l~~~~~~~~D~ViIDTaGr~~~~ 211 (318)
T PRK10416 134 LAHKYKAQGKKVLLAAGDTFRAAAIEQLQVWGERVGVPVIAQKEG--ADPASVAFDAIQAAKARGIDVLIIDTAGRLHNK 211 (318)
T ss_pred HHHHHHhcCCeEEEEecCccchhhHHHHHHHHHHcCceEEEeCCC--CCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcCC
Confidence 3333445555666543 33432 223344566655444321 110 011244555555677888887774 2321
Q ss_pred cCCCHHHHHHHHHHHH------hCCCEEEEeccccc
Q 018665 124 SVYPKNLLDEIARIVA------KHPRLLVLSDEIYE 153 (352)
Q Consensus 124 ~~~~~~~l~~l~~~~~------~~~~~~livD~~~~ 153 (352)
..-.++++++.++++ .+ .+++++|...+
T Consensus 212 -~~l~~eL~~~~~v~~~~~~~~p~-~~~LVl~a~~g 245 (318)
T PRK10416 212 -TNLMEELKKIKRVIKKADPDAPH-EVLLVLDATTG 245 (318)
T ss_pred -HHHHHHHHHHHHHHhhhcCCCCc-eEEEEEECCCC
Confidence 111245667666664 34 67788887743
No 500
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=36.54 E-value=1.8e+02 Score=24.82 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=52.6
Q ss_pred CHHHHHhhccCCeeEEEEcCCC-CCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 98 DPKVLESKLTEKSRLLILCSPS-NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 98 d~~~l~~~l~~~~~~i~i~~p~-nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
+++++.+.+. .++.|++..|+ ++|..+ ++.++....+- + +|+|.=.+.+. +. ..-...+....-+.+
T Consensus 49 sl~el~~~L~-~pr~vWlMvPag~it~~v-----i~~la~~L~~G-D--ivIDGGNS~y~--Ds-~rr~~~l~~kgi~fl 116 (300)
T COG1023 49 SLDELVAKLS-APRIVWLMVPAGDITDAV-----IDDLAPLLSAG-D--IVIDGGNSNYK--DS-LRRAKLLAEKGIHFL 116 (300)
T ss_pred CHHHHHHhcC-CCcEEEEEccCCCchHHH-----HHHHHhhcCCC-C--EEEECCccchH--HH-HHHHHHHHhcCCeEE
Confidence 5777777775 67888888885 476444 77887777665 4 34575444321 10 000011111122334
Q ss_pred EEeccccccccccceeEEEE-cChhHHHHHHhh
Q 018665 177 TVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKI 208 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~-~~~~~~~~~~~~ 208 (352)
-+++..-.+| .-.+.++++ ++++.++++..+
T Consensus 117 D~GTSGG~~G-~~~G~~lMiGG~~~a~~~~~pi 148 (300)
T COG1023 117 DVGTSGGVWG-AERGYCLMIGGDEEAVERLEPI 148 (300)
T ss_pred eccCCCCchh-hhcCceEEecCcHHHHHHHHHH
Confidence 5665544444 333455556 466666666544
Done!