Query 018665
Match_columns 352
No_of_seqs 124 out of 1553
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 04:10:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b5p_A Protein (aspartate amin 100.0 4.5E-47 1.5E-51 346.1 33.9 320 3-344 63-383 (385)
2 1j32_A Aspartate aminotransfer 100.0 5E-46 1.7E-50 339.5 33.1 325 2-346 61-387 (388)
3 3fvs_A Kynurenine--oxoglutarat 100.0 6.3E-46 2.2E-50 342.6 31.4 335 2-345 61-421 (422)
4 1gd9_A Aspartate aminotransfer 100.0 2.9E-45 9.8E-50 334.6 34.9 324 3-347 58-387 (389)
5 3dyd_A Tyrosine aminotransfera 100.0 2E-45 7E-50 339.5 33.0 328 3-347 91-425 (427)
6 3nra_A Aspartate aminotransfer 100.0 2.3E-45 7.8E-50 337.2 32.4 325 3-347 73-406 (407)
7 2x5d_A Probable aminotransfera 100.0 2.6E-45 9E-50 337.4 32.8 327 3-348 70-400 (412)
8 1yiz_A Kynurenine aminotransfe 100.0 5E-45 1.7E-49 337.3 34.1 334 3-345 72-428 (429)
9 2o1b_A Aminotransferase, class 100.0 2.2E-45 7.4E-50 337.0 31.3 320 3-346 80-403 (404)
10 3h14_A Aminotransferase, class 100.0 3.9E-45 1.3E-49 334.0 32.8 319 3-349 63-385 (391)
11 3b46_A Aminotransferase BNA3; 100.0 1.1E-45 3.7E-50 343.2 29.2 329 2-342 89-443 (447)
12 3aow_A Putative uncharacterize 100.0 3.9E-45 1.3E-49 339.2 32.8 319 3-347 113-446 (448)
13 1u08_A Hypothetical aminotrans 100.0 5E-45 1.7E-49 332.7 32.9 319 2-341 61-385 (386)
14 2o0r_A RV0858C (N-succinyldiam 100.0 4.6E-45 1.6E-49 335.7 31.4 327 2-348 56-398 (411)
15 1o4s_A Aspartate aminotransfer 100.0 8.5E-45 2.9E-49 331.5 32.7 315 3-345 73-388 (389)
16 3jtx_A Aminotransferase; NP_28 100.0 9.9E-45 3.4E-49 331.8 32.7 316 2-343 60-395 (396)
17 3e2y_A Kynurenine-oxoglutarate 100.0 1.4E-44 4.8E-49 332.3 33.1 330 3-341 56-408 (410)
18 2dou_A Probable N-succinyldiam 100.0 8.8E-45 3E-49 329.9 31.1 314 3-343 58-375 (376)
19 2r2n_A Kynurenine/alpha-aminoa 100.0 2.4E-44 8.3E-49 332.2 33.3 319 3-346 73-424 (425)
20 3fdb_A Beta C-S lyase, putativ 100.0 6.2E-45 2.1E-49 331.0 28.4 316 3-346 55-376 (377)
21 3ele_A Amino transferase; RER0 100.0 4.3E-44 1.5E-48 327.8 34.0 312 3-347 71-397 (398)
22 1c7n_A Cystalysin; transferase 100.0 3.3E-44 1.1E-48 328.7 32.9 325 3-349 63-396 (399)
23 1xi9_A Putative transaminase; 100.0 1.6E-44 5.5E-49 331.5 30.6 322 3-347 73-404 (406)
24 3dzz_A Putative pyridoxal 5'-p 100.0 6.2E-44 2.1E-48 325.9 34.2 318 10-347 64-390 (391)
25 1bw0_A TAT, protein (tyrosine 100.0 2.9E-44 9.9E-49 330.9 31.5 330 2-348 69-415 (416)
26 3kax_A Aminotransferase, class 100.0 5.4E-44 1.8E-48 325.4 32.8 314 10-343 61-382 (383)
27 3op7_A Aminotransferase class 100.0 9E-45 3.1E-49 329.7 27.5 316 3-348 58-373 (375)
28 1d2f_A MALY protein; aminotran 100.0 1.2E-43 4.2E-48 323.9 33.6 321 3-347 60-390 (390)
29 2x5f_A Aspartate_tyrosine_phen 100.0 7.2E-44 2.5E-48 329.6 32.2 320 2-347 82-430 (430)
30 4dq6_A Putative pyridoxal phos 100.0 1.5E-43 5.1E-48 323.3 33.9 315 8-343 67-390 (391)
31 1iay_A ACC synthase 2, 1-amino 100.0 1.5E-43 5E-48 327.4 33.0 329 3-346 78-427 (428)
32 3l8a_A METC, putative aminotra 100.0 9.6E-44 3.3E-48 327.8 30.6 315 10-344 98-420 (421)
33 3ihj_A Alanine aminotransferas 100.0 7.8E-44 2.7E-48 334.1 29.7 334 3-348 124-495 (498)
34 3ezs_A Aminotransferase ASPB; 100.0 5.1E-44 1.8E-48 324.8 27.7 311 2-346 53-375 (376)
35 2gb3_A Aspartate aminotransfer 100.0 3.6E-43 1.2E-47 322.8 33.4 318 3-348 74-404 (409)
36 3piu_A 1-aminocyclopropane-1-c 100.0 7.5E-44 2.6E-48 330.0 28.9 331 2-347 80-433 (435)
37 3tcm_A Alanine aminotransferas 100.0 1.4E-43 4.8E-48 332.9 31.0 335 2-347 128-495 (500)
38 2z61_A Probable aspartate amin 100.0 4.9E-43 1.7E-47 317.8 33.2 306 2-344 60-369 (370)
39 1vp4_A Aminotransferase, putat 100.0 7.8E-44 2.7E-48 328.8 27.0 321 3-348 80-420 (425)
40 2zc0_A Alanine glyoxylate tran 100.0 5.3E-43 1.8E-47 321.5 31.1 320 4-347 71-405 (407)
41 3g0t_A Putative aminotransfera 100.0 2.6E-43 8.8E-48 326.6 28.2 319 2-345 76-436 (437)
42 3qgu_A LL-diaminopimelate amin 100.0 3.2E-43 1.1E-47 327.0 28.6 314 3-345 106-439 (449)
43 1v2d_A Glutamine aminotransfer 100.0 1.2E-42 4E-47 316.5 30.9 313 2-348 55-373 (381)
44 1fg7_A Histidinol phosphate am 100.0 3.5E-42 1.2E-46 310.4 32.6 298 2-342 53-354 (356)
45 2zyj_A Alpha-aminodipate amino 100.0 1.3E-42 4.3E-47 318.0 27.8 315 3-347 69-394 (397)
46 3get_A Histidinol-phosphate am 100.0 3.4E-42 1.1E-46 311.7 27.9 302 3-343 61-364 (365)
47 3ly1_A Putative histidinol-pho 100.0 7.7E-42 2.6E-46 308.0 30.0 301 6-345 49-351 (354)
48 3ppl_A Aspartate aminotransfer 100.0 6.8E-42 2.3E-46 316.1 27.7 315 2-346 72-420 (427)
49 3ffh_A Histidinol-phosphate am 100.0 2.6E-41 9E-46 305.6 30.9 300 5-343 64-363 (363)
50 3ei9_A LL-diaminopimelate amin 100.0 1.6E-41 5.5E-46 314.0 29.4 314 3-346 93-428 (432)
51 3d6k_A Putative aminotransfera 100.0 8.4E-42 2.9E-46 314.9 27.3 315 3-347 71-419 (422)
52 3k7y_A Aspartate aminotransfer 100.0 4.1E-42 1.4E-46 313.5 24.0 311 2-345 66-404 (405)
53 3rq1_A Aminotransferase class 100.0 3.5E-41 1.2E-45 310.4 29.4 315 3-347 75-416 (418)
54 3asa_A LL-diaminopimelate amin 100.0 9.2E-42 3.2E-46 312.5 25.2 313 3-347 70-394 (400)
55 3t18_A Aminotransferase class 100.0 7.3E-41 2.5E-45 307.9 28.5 312 3-347 74-411 (413)
56 3ftb_A Histidinol-phosphate am 100.0 5.6E-40 1.9E-44 296.6 33.1 298 6-345 59-360 (361)
57 1lc5_A COBD, L-threonine-O-3-p 100.0 3.6E-40 1.2E-44 298.3 31.1 303 3-346 55-360 (364)
58 3ez1_A Aminotransferase MOCR f 100.0 8.5E-41 2.9E-45 308.4 27.2 316 2-347 63-416 (423)
59 3g7q_A Valine-pyruvate aminotr 100.0 1.2E-40 4.2E-45 306.7 28.0 318 3-347 70-414 (417)
60 3f6t_A Aspartate aminotransfer 100.0 9.4E-41 3.2E-45 315.6 26.8 331 3-347 133-526 (533)
61 3if2_A Aminotransferase; YP_26 100.0 3E-40 1E-44 306.6 28.5 323 3-348 78-442 (444)
62 3cq5_A Histidinol-phosphate am 100.0 4.5E-39 1.5E-43 291.6 33.3 300 3-345 65-367 (369)
63 3euc_A Histidinol-phosphate am 100.0 1.3E-39 4.4E-44 294.9 29.6 297 6-344 65-366 (367)
64 7aat_A Aspartate aminotransfer 100.0 1.8E-40 6E-45 304.2 23.4 310 3-343 66-400 (401)
65 3b1d_A Betac-S lyase; HET: PLP 100.0 5.5E-44 1.9E-48 326.5 0.0 315 10-344 68-391 (392)
66 4f4e_A Aromatic-amino-acid ami 100.0 1.8E-40 6.1E-45 305.9 23.1 310 3-343 87-419 (420)
67 2zy4_A L-aspartate beta-decarb 100.0 1.4E-39 4.6E-44 307.7 27.2 329 2-347 132-523 (546)
68 3fsl_A Aromatic-amino-acid ami 100.0 5.3E-40 1.8E-44 300.5 23.6 310 3-343 65-397 (397)
69 1ajs_A Aspartate aminotransfer 100.0 6.5E-40 2.2E-44 301.4 22.6 313 3-346 69-411 (412)
70 3p1t_A Putative histidinol-pho 100.0 2.8E-38 9.7E-43 282.7 31.8 290 2-344 46-335 (337)
71 1yaa_A Aspartate aminotransfer 100.0 1E-39 3.4E-44 300.2 22.1 313 3-346 68-411 (412)
72 4eu1_A Mitochondrial aspartate 100.0 2.5E-39 8.5E-44 297.3 23.4 310 2-343 73-408 (409)
73 2q7w_A Aspartate aminotransfer 100.0 1.2E-39 4.2E-44 298.0 21.1 310 3-343 64-396 (396)
74 3meb_A Aspartate aminotransfer 100.0 3.3E-39 1.1E-43 299.6 23.6 314 3-346 89-444 (448)
75 3hdo_A Histidinol-phosphate am 100.0 8E-38 2.7E-42 282.4 31.1 292 6-345 63-354 (360)
76 3bwn_A AT1G70560, L-tryptophan 100.0 7.2E-39 2.5E-43 292.2 22.8 298 2-345 57-386 (391)
77 2ay1_A Aroat, aromatic amino a 100.0 2.6E-38 8.8E-43 289.1 20.6 307 3-342 64-392 (394)
78 2hox_A ALLIIN lyase 1; cystein 100.0 8.8E-38 3E-42 287.8 23.4 296 4-345 92-424 (427)
79 3fkd_A L-threonine-O-3-phospha 100.0 4.4E-37 1.5E-41 276.5 27.0 294 3-346 46-342 (350)
80 1uu1_A Histidinol-phosphate am 100.0 2.4E-36 8.2E-41 270.1 26.1 283 3-342 52-334 (335)
81 3a2b_A Serine palmitoyltransfe 100.0 9.5E-36 3.2E-40 272.4 27.8 302 4-348 80-394 (398)
82 4h51_A Aspartate aminotransfer 100.0 3E-36 1E-40 274.8 21.5 313 4-348 83-419 (420)
83 2dr1_A PH1308 protein, 386AA l 100.0 5.2E-35 1.8E-39 266.2 29.0 295 21-347 56-380 (386)
84 1eg5_A Aminotransferase; PLP-d 100.0 5.1E-35 1.8E-39 266.0 24.3 296 9-348 45-378 (384)
85 1vjo_A Alanine--glyoxylate ami 100.0 6.1E-35 2.1E-39 266.6 24.7 292 21-343 70-392 (393)
86 1kmj_A Selenocysteine lyase; p 100.0 9.4E-35 3.2E-39 266.2 25.9 297 7-346 66-405 (406)
87 1t3i_A Probable cysteine desul 100.0 3.2E-34 1.1E-38 263.9 27.4 299 8-348 72-415 (420)
88 2z9v_A Aspartate aminotransfer 100.0 3.3E-34 1.1E-38 261.6 25.8 294 21-349 49-374 (392)
89 1elu_A L-cysteine/L-cystine C- 100.0 2.2E-34 7.6E-39 262.4 23.3 294 8-342 59-388 (390)
90 3zrp_A Serine-pyruvate aminotr 100.0 1.2E-33 4E-38 257.0 27.9 291 21-349 42-366 (384)
91 2huf_A Alanine glyoxylate amin 100.0 1.1E-33 3.7E-38 258.3 27.5 300 9-349 53-386 (393)
92 2ch1_A 3-hydroxykynurenine tra 100.0 6.8E-34 2.3E-38 259.9 26.2 299 10-348 53-385 (396)
93 3nnk_A Ureidoglycine-glyoxylat 100.0 1.2E-33 4.2E-38 259.4 27.9 294 21-349 53-393 (411)
94 3tqx_A 2-amino-3-ketobutyrate 100.0 6E-34 2.1E-38 260.4 24.6 297 7-347 87-397 (399)
95 1iug_A Putative aspartate amin 100.0 5E-34 1.7E-38 256.5 23.3 294 10-347 36-349 (352)
96 1fc4_A 2-amino-3-ketobutyrate 100.0 8.9E-34 3.1E-38 259.6 25.3 296 7-348 89-399 (401)
97 3isl_A Purine catabolism prote 100.0 3.6E-33 1.2E-37 256.6 29.3 293 21-348 51-392 (416)
98 2w8t_A SPT, serine palmitoyltr 100.0 1.6E-33 5.4E-38 260.0 25.1 295 9-348 110-417 (427)
99 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 9.9E-35 3.4E-39 263.1 16.7 292 4-346 49-370 (371)
100 3kgw_A Alanine-glyoxylate amin 100.0 3.5E-33 1.2E-37 254.7 26.6 295 21-349 63-391 (393)
101 1e5e_A MGL, methionine gamma-l 100.0 5.3E-33 1.8E-37 254.3 27.3 279 12-348 66-397 (404)
102 4eb5_A Probable cysteine desul 100.0 3.6E-33 1.2E-37 253.7 26.0 290 21-348 50-375 (382)
103 3lvm_A Cysteine desulfurase; s 100.0 8.2E-34 2.8E-38 261.6 21.6 289 21-348 75-401 (423)
104 1bs0_A Protein (8-amino-7-oxon 100.0 5.1E-33 1.8E-37 253.1 25.9 291 5-342 81-383 (384)
105 2yrr_A Aminotransferase, class 100.0 1.2E-33 4E-38 254.1 20.9 295 10-345 35-352 (353)
106 2bwn_A 5-aminolevulinate synth 100.0 1.9E-33 6.4E-38 257.5 22.5 301 4-346 87-400 (401)
107 1m32_A 2-aminoethylphosphonate 100.0 3E-33 1E-37 252.7 23.1 298 8-346 37-365 (366)
108 4hvk_A Probable cysteine desul 100.0 6.8E-33 2.3E-37 251.7 25.3 288 21-348 50-375 (382)
109 3cai_A Possible aminotransfera 100.0 1.2E-32 4.1E-37 252.4 27.0 293 9-342 70-405 (406)
110 3f9t_A TDC, L-tyrosine decarbo 100.0 2.4E-32 8.3E-37 249.3 25.4 290 21-344 72-396 (397)
111 3f0h_A Aminotransferase; RER07 100.0 7E-32 2.4E-36 244.8 26.3 292 21-345 59-373 (376)
112 3kki_A CAI-1 autoinducer synth 100.0 4.5E-32 1.5E-36 248.9 25.0 294 7-346 103-404 (409)
113 1sff_A 4-aminobutyrate aminotr 100.0 1.6E-32 5.4E-37 253.3 21.7 313 4-347 80-425 (426)
114 3ruy_A Ornithine aminotransfer 100.0 1.1E-31 3.7E-36 245.0 25.7 278 21-343 85-391 (392)
115 1svv_A Threonine aldolase; str 100.0 1.9E-31 6.6E-36 240.2 23.5 305 3-346 40-358 (359)
116 2eh6_A Acoat, acetylornithine 100.0 1.1E-31 3.6E-36 243.6 21.9 285 6-343 68-375 (375)
117 1v72_A Aldolase; PLP-dependent 100.0 8.5E-31 2.9E-35 235.8 27.4 287 21-347 50-354 (356)
118 1jg8_A L-ALLO-threonine aldola 100.0 2.3E-31 7.9E-36 238.8 23.7 296 3-346 33-346 (347)
119 3vax_A Putative uncharacterize 100.0 4E-32 1.4E-36 248.4 18.6 285 21-345 70-399 (400)
120 2ord_A Acoat, acetylornithine 100.0 7.2E-32 2.5E-36 246.6 18.9 274 36-345 97-396 (397)
121 3ffr_A Phosphoserine aminotran 100.0 7.2E-31 2.5E-35 236.7 24.5 286 21-343 46-361 (362)
122 2rfv_A Methionine gamma-lyase; 100.0 1.9E-30 6.5E-35 237.2 26.8 285 7-342 63-396 (398)
123 2bkw_A Alanine-glyoxylate amin 100.0 1.5E-30 5E-35 236.7 25.3 291 21-346 45-384 (385)
124 3mad_A Sphingosine-1-phosphate 100.0 1.2E-30 4.2E-35 246.2 25.6 300 21-348 142-471 (514)
125 3mc6_A Sphingosine-1-phosphate 100.0 1.2E-30 4.2E-35 245.3 25.4 309 5-348 100-439 (497)
126 3i4j_A Aminotransferase, class 100.0 2.2E-30 7.4E-35 239.3 26.4 324 4-346 64-428 (430)
127 4adb_A Succinylornithine trans 100.0 1.5E-30 5.1E-35 238.5 24.7 286 21-348 88-402 (406)
128 1zod_A DGD, 2,2-dialkylglycine 100.0 1.1E-30 3.8E-35 241.5 23.0 306 21-346 88-432 (433)
129 2pb2_A Acetylornithine/succiny 100.0 1.7E-30 5.8E-35 239.1 23.6 288 21-346 102-418 (420)
130 2ez2_A Beta-tyrosinase, tyrosi 100.0 2E-30 7E-35 241.3 24.3 310 3-347 70-432 (456)
131 3nx3_A Acoat, acetylornithine 100.0 5.9E-30 2E-34 233.7 26.7 278 36-345 93-394 (395)
132 1s0a_A Adenosylmethionine-8-am 100.0 6.1E-30 2.1E-34 236.2 25.7 292 21-347 93-425 (429)
133 2oga_A Transaminase; PLP-depen 100.0 1.5E-29 5.2E-34 231.3 27.9 298 3-348 58-398 (399)
134 1vef_A Acetylornithine/acetyl- 100.0 1.6E-30 5.3E-35 237.6 20.9 287 21-343 94-394 (395)
135 3a9z_A Selenocysteine lyase; P 100.0 1.7E-30 5.7E-35 240.2 21.1 292 21-349 68-431 (432)
136 1b9h_A AHBA synthase, protein 100.0 8.3E-30 2.8E-34 232.2 25.4 297 3-345 33-387 (388)
137 3lws_A Aromatic amino acid bet 100.0 4E-30 1.4E-34 231.6 22.7 297 3-343 42-356 (357)
138 2eo5_A 419AA long hypothetical 100.0 8.6E-30 2.9E-34 234.4 25.3 288 21-346 89-418 (419)
139 3gju_A Putative aminotransfera 100.0 3.8E-29 1.3E-33 232.7 29.3 322 4-347 87-457 (460)
140 2aeu_A Hypothetical protein MJ 100.0 2E-29 6.9E-34 228.3 26.7 281 36-347 76-372 (374)
141 4ffc_A 4-aminobutyrate aminotr 100.0 9.5E-30 3.3E-34 236.2 24.0 323 3-348 98-451 (453)
142 1ibj_A CBL, cystathionine beta 100.0 3.4E-29 1.2E-33 232.1 27.3 284 21-346 136-462 (464)
143 3dxv_A Alpha-amino-epsilon-cap 100.0 7.1E-30 2.4E-34 236.4 22.6 316 3-348 77-427 (439)
144 3pj0_A LMO0305 protein; struct 100.0 1.3E-29 4.5E-34 228.4 23.4 298 3-342 43-358 (359)
145 2po3_A 4-dehydrase; external a 100.0 1.8E-28 6.1E-33 226.0 31.4 298 3-346 46-386 (424)
146 2oat_A Ornithine aminotransfer 100.0 6.5E-29 2.2E-33 229.7 28.2 284 21-345 125-438 (439)
147 2dkj_A Serine hydroxymethyltra 100.0 8.8E-30 3E-34 233.4 22.2 290 22-345 77-387 (407)
148 1cs1_A CGS, protein (cystathio 100.0 6.1E-29 2.1E-33 226.3 27.1 282 7-342 51-383 (386)
149 1pff_A Methionine gamma-lyase; 100.0 2.4E-29 8.3E-34 224.2 23.7 279 19-342 3-330 (331)
150 4a6r_A Omega transaminase; tra 100.0 9.8E-29 3.3E-33 229.9 28.5 320 4-347 86-450 (459)
151 1mdo_A ARNB aminotransferase; 100.0 6.6E-29 2.3E-33 226.6 26.9 292 4-347 35-387 (393)
152 3ndn_A O-succinylhomoserine su 100.0 4.5E-29 1.5E-33 228.4 25.1 280 21-343 88-413 (414)
153 1qz9_A Kynureninase; kynurenin 100.0 2.2E-29 7.6E-34 231.4 22.7 279 21-347 78-403 (416)
154 3n5m_A Adenosylmethionine-8-am 100.0 5.4E-29 1.8E-33 231.4 25.3 309 21-345 94-451 (452)
155 3e9k_A Kynureninase; kynurenin 100.0 1.2E-29 4.1E-34 236.6 21.0 287 21-347 118-462 (465)
156 3tfu_A Adenosylmethionine-8-am 100.0 2.3E-29 7.9E-34 233.5 22.2 293 21-348 125-455 (457)
157 1z7d_A Ornithine aminotransfer 100.0 8.3E-29 2.8E-33 228.6 25.6 287 21-349 114-432 (433)
158 3qhx_A Cystathionine gamma-syn 100.0 1.3E-28 4.6E-33 224.2 26.6 280 10-342 68-390 (392)
159 1gc0_A Methionine gamma-lyase; 100.0 3.4E-28 1.2E-32 222.2 28.2 282 7-342 64-397 (398)
160 1ax4_A Tryptophanase; tryptoph 100.0 7.6E-29 2.6E-33 231.3 24.1 316 3-347 71-442 (467)
161 1qgn_A Protein (cystathionine 100.0 2.9E-28 9.8E-33 224.2 27.2 278 21-345 121-444 (445)
162 3l44_A Glutamate-1-semialdehyd 100.0 3E-29 1E-33 231.9 20.0 315 6-347 93-431 (434)
163 3dod_A Adenosylmethionine-8-am 100.0 1.8E-28 6.2E-33 227.5 25.2 317 4-347 79-444 (448)
164 3oks_A 4-aminobutyrate transam 100.0 5.7E-29 1.9E-33 230.9 21.8 320 3-345 95-450 (451)
165 3a8u_X Omega-amino acid--pyruv 100.0 5.6E-29 1.9E-33 231.1 21.7 300 21-346 96-447 (449)
166 2fnu_A Aminotransferase; prote 100.0 4.8E-28 1.7E-32 219.4 26.9 294 4-347 28-373 (375)
167 3i5t_A Aminotransferase; pyrid 100.0 4.6E-28 1.6E-32 226.0 27.3 312 8-347 93-455 (476)
168 3cog_A Cystathionine gamma-lya 100.0 1.4E-28 4.8E-33 224.8 23.3 191 6-230 65-262 (403)
169 3uwc_A Nucleotide-sugar aminot 100.0 8.3E-28 2.8E-32 217.8 28.2 295 3-346 33-371 (374)
170 2c0r_A PSAT, phosphoserine ami 100.0 2.5E-29 8.7E-34 226.9 18.1 283 21-346 52-361 (362)
171 1w23_A Phosphoserine aminotran 100.0 1.3E-29 4.6E-34 228.4 15.9 281 21-345 55-359 (360)
172 1wyu_B Glycine dehydrogenase s 100.0 2.3E-28 8E-33 228.1 22.9 292 21-345 110-440 (474)
173 3acz_A Methionine gamma-lyase; 100.0 9.9E-28 3.4E-32 218.4 26.3 282 7-345 58-388 (389)
174 3n0l_A Serine hydroxymethyltra 100.0 1E-27 3.5E-32 220.3 26.2 290 21-346 78-389 (417)
175 2c81_A Glutamine-2-deoxy-scyll 100.0 6.3E-27 2.2E-31 215.3 31.2 303 4-347 34-415 (418)
176 2cb1_A O-acetyl homoserine sul 100.0 4.7E-27 1.6E-31 215.6 29.6 278 8-341 56-411 (412)
177 3hmu_A Aminotransferase, class 100.0 4.9E-28 1.7E-32 225.5 23.1 304 21-346 102-452 (472)
178 2vi8_A Serine hydroxymethyltra 100.0 9.2E-28 3.2E-32 219.8 22.8 291 21-347 76-388 (405)
179 3dr4_A Putative perosamine syn 100.0 2.8E-27 9.7E-32 215.7 25.7 292 3-343 50-390 (391)
180 2dgk_A GAD-beta, GADB, glutama 100.0 3.3E-27 1.1E-31 219.2 26.5 313 6-348 75-436 (452)
181 1n8p_A Cystathionine gamma-lya 100.0 1.8E-27 6.2E-32 216.7 23.5 283 8-342 55-391 (393)
182 3k28_A Glutamate-1-semialdehyd 100.0 3.6E-28 1.2E-32 224.3 19.0 312 4-347 89-428 (429)
183 3ke3_A Putative serine-pyruvat 100.0 1.7E-27 5.7E-32 216.3 22.7 292 21-347 42-377 (379)
184 3gbx_A Serine hydroxymethyltra 100.0 1.7E-27 5.8E-32 219.1 23.0 289 21-346 83-396 (420)
185 2cjg_A L-lysine-epsilon aminot 100.0 8E-28 2.7E-32 223.0 20.9 289 21-346 108-448 (449)
186 2fyf_A PSAT, phosphoserine ami 100.0 1.8E-27 6E-32 217.6 22.7 280 21-345 85-397 (398)
187 2x3l_A ORN/Lys/Arg decarboxyla 100.0 1.6E-28 5.6E-33 227.1 15.9 290 5-347 54-354 (446)
188 1rv3_A Serine hydroxymethyltra 100.0 1.5E-27 5.1E-32 222.9 22.3 295 21-345 93-430 (483)
189 2fq6_A Cystathionine beta-lyas 100.0 5.4E-27 1.8E-31 214.4 25.2 278 21-341 89-413 (415)
190 3ri6_A O-acetylhomoserine sulf 100.0 7.9E-27 2.7E-31 214.0 26.0 282 8-343 82-429 (430)
191 1o69_A Aminotransferase; struc 100.0 1E-26 3.6E-31 212.1 26.7 302 4-345 26-386 (394)
192 3nyt_A Aminotransferase WBPE; 100.0 1.7E-26 5.7E-31 208.8 26.8 287 3-342 30-360 (367)
193 3frk_A QDTB; aminotransferase, 100.0 1.3E-26 4.4E-31 210.0 24.6 294 3-345 31-367 (373)
194 3ecd_A Serine hydroxymethyltra 100.0 2.5E-26 8.6E-31 211.6 26.4 278 40-346 98-397 (425)
195 2okj_A Glutamate decarboxylase 100.0 3.3E-26 1.1E-30 215.3 27.6 309 21-346 135-502 (504)
196 4e77_A Glutamate-1-semialdehyd 100.0 4.1E-27 1.4E-31 217.3 20.8 289 35-345 108-428 (429)
197 2cy8_A D-phgat, D-phenylglycin 100.0 4.6E-27 1.6E-31 218.4 19.9 301 9-347 94-436 (453)
198 2epj_A Glutamate-1-semialdehyd 100.0 2.1E-27 7.2E-32 219.5 17.4 286 35-346 111-431 (434)
199 1js3_A DDC;, DOPA decarboxylas 99.9 1E-26 3.5E-31 217.9 21.7 312 4-348 105-476 (486)
200 2oqx_A Tryptophanase; lyase, p 99.9 2.9E-27 9.9E-32 220.7 17.5 315 3-347 69-443 (467)
201 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2E-25 6.9E-30 206.4 29.2 294 3-344 57-434 (437)
202 3nmy_A Xometc, cystathionine g 99.9 6.3E-26 2.1E-30 206.6 25.1 276 21-344 74-397 (400)
203 3vp6_A Glutamate decarboxylase 99.9 1.2E-25 4.2E-30 211.2 27.6 324 3-346 126-505 (511)
204 2z67_A O-phosphoseryl-tRNA(SEC 99.9 1.2E-26 4.1E-31 215.5 20.3 290 21-343 140-455 (456)
205 3fq8_A Glutamate-1-semialdehyd 99.9 7.2E-27 2.5E-31 215.5 18.3 307 21-345 95-426 (427)
206 3hbx_A GAD 1, glutamate decarb 99.9 9.8E-26 3.4E-30 211.5 25.9 307 21-348 98-446 (502)
207 2qma_A Diaminobutyrate-pyruvat 99.9 7.1E-26 2.4E-30 212.7 23.9 303 21-346 143-496 (497)
208 2e7u_A Glutamate-1-semialdehyd 99.9 1.7E-26 5.7E-31 212.9 19.1 293 21-343 95-424 (424)
209 3h7f_A Serine hydroxymethyltra 99.9 1.4E-25 4.9E-30 207.8 24.8 280 39-346 109-414 (447)
210 2ctz_A O-acetyl-L-homoserine s 99.9 4.3E-25 1.5E-29 202.9 23.7 277 21-343 65-420 (421)
211 2jis_A Cysteine sulfinic acid 99.9 1.9E-24 6.5E-29 203.7 27.5 300 21-345 155-514 (515)
212 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3.6E-24 1.2E-28 195.1 28.3 289 3-339 29-389 (390)
213 4e1o_A HDC, histidine decarbox 99.9 5.1E-25 1.8E-29 205.7 23.2 314 2-346 108-478 (481)
214 1c4k_A Protein (ornithine deca 99.9 6.6E-25 2.2E-29 212.0 24.1 314 6-347 171-567 (730)
215 3k40_A Aromatic-L-amino-acid d 99.9 7.3E-25 2.5E-29 204.2 21.9 313 3-348 104-473 (475)
216 3ju7_A Putative PLP-dependent 99.9 2.4E-24 8.4E-29 194.9 23.9 292 7-346 35-375 (377)
217 1wyu_A Glycine dehydrogenase ( 99.9 1.8E-24 6.1E-29 200.0 22.1 282 18-343 112-437 (438)
218 2a7v_A Serine hydroxymethyltra 99.9 1.2E-23 4.1E-28 195.0 25.4 291 21-345 107-440 (490)
219 1ohv_A 4-aminobutyrate aminotr 99.9 5.1E-24 1.7E-28 198.4 22.2 297 10-346 108-471 (472)
220 3jzl_A Putative cystathionine 99.9 4.1E-24 1.4E-28 194.5 20.5 250 9-304 60-338 (409)
221 3i16_A Aluminum resistance pro 99.9 3E-24 1E-28 196.0 17.7 254 7-304 72-355 (427)
222 2vyc_A Biodegradative arginine 99.9 1.5E-23 5.2E-28 204.3 22.6 303 21-346 212-605 (755)
223 2yky_A Beta-transaminase; tran 99.9 9.2E-27 3.1E-31 214.6 0.0 293 21-347 147-461 (465)
224 3hvy_A Cystathionine beta-lyas 99.9 1.6E-23 5.4E-28 191.2 19.4 251 7-304 73-355 (427)
225 3ht4_A Aluminum resistance pro 99.9 2.1E-23 7.2E-28 191.3 18.8 250 21-304 72-344 (431)
226 3e77_A Phosphoserine aminotran 99.9 2E-23 6.9E-28 187.1 18.0 285 21-346 65-375 (377)
227 3qm2_A Phosphoserine aminotran 99.9 6.1E-22 2.1E-26 178.5 18.6 286 10-345 74-384 (386)
228 3m5u_A Phosphoserine aminotran 99.9 1.3E-21 4.4E-26 174.8 19.0 279 21-345 57-359 (361)
229 4ao9_A Beta-phenylalanine amin 99.9 2.7E-21 9.2E-26 177.0 20.9 288 35-348 142-448 (454)
230 3n75_A LDC, lysine decarboxyla 99.9 1.1E-20 3.9E-25 181.1 23.5 299 21-346 202-560 (715)
231 4atq_A 4-aminobutyrate transam 99.9 4.2E-20 1.4E-24 169.8 23.2 291 36-346 125-455 (456)
232 4e3q_A Pyruvate transaminase; 99.8 3.3E-19 1.1E-23 164.5 24.6 293 35-346 127-468 (473)
233 4a0g_A Adenosylmethionine-8-am 99.8 4.9E-19 1.7E-23 173.8 15.3 230 100-347 577-829 (831)
234 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 2.2E-17 7.4E-22 147.8 22.8 308 21-349 119-464 (501)
235 3ou5_A Serine hydroxymethyltra 99.8 2.2E-16 7.5E-21 140.8 23.9 277 38-344 123-439 (490)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 6.6E-16 2.3E-20 140.0 22.0 308 21-348 101-445 (450)
237 2yvq_A Carbamoyl-phosphate syn 87.0 3.4 0.00012 30.8 8.1 123 19-149 7-131 (143)
238 1oft_A SULA, hypothetical prot 78.4 20 0.00068 27.2 9.6 101 38-147 48-156 (161)
239 1ofu_X SULA, hypothetical prot 75.8 19 0.00066 25.7 8.8 101 38-147 6-114 (119)
240 2gjh_A Designed protein; oblig 71.1 11 0.00036 21.8 4.6 29 320-348 3-32 (62)
241 2nu8_A Succinyl-COA ligase [AD 64.6 45 0.0016 27.9 9.5 75 68-153 51-125 (288)
242 3rwb_A TPLDH, pyridoxal 4-dehy 63.7 41 0.0014 27.1 9.0 97 35-136 5-109 (247)
243 4fgs_A Probable dehydrogenase 62.4 30 0.001 28.8 7.9 97 35-137 28-133 (273)
244 3grp_A 3-oxoacyl-(acyl carrier 61.3 26 0.0009 28.8 7.4 69 34-107 25-93 (266)
245 3tpc_A Short chain alcohol deh 59.1 47 0.0016 26.9 8.6 68 35-107 6-73 (257)
246 3e2i_A Thymidine kinase; Zn-bi 58.8 20 0.00068 28.8 5.8 95 46-155 43-140 (219)
247 3mwd_B ATP-citrate synthase; A 58.8 21 0.0007 30.8 6.3 76 67-153 64-141 (334)
248 2yv2_A Succinyl-COA synthetase 57.8 19 0.00066 30.4 6.0 76 68-154 57-133 (297)
249 4dqx_A Probable oxidoreductase 57.3 46 0.0016 27.5 8.3 98 34-136 25-130 (277)
250 1bqc_A Protein (beta-mannanase 56.6 28 0.00094 29.3 6.9 50 73-151 37-86 (302)
251 3gem_A Short chain dehydrogena 55.7 46 0.0016 27.2 7.9 66 34-106 25-90 (260)
252 2yv1_A Succinyl-COA ligase [AD 55.4 12 0.00042 31.6 4.4 76 68-154 57-132 (294)
253 1oi7_A Succinyl-COA synthetase 55.0 16 0.00055 30.8 5.0 76 68-154 51-126 (288)
254 2o23_A HADH2 protein; HSD17B10 54.2 85 0.0029 25.3 10.2 68 35-107 11-78 (265)
255 4e6p_A Probable sorbitol dehyd 54.0 49 0.0017 26.9 7.9 98 34-136 6-111 (259)
256 2yxb_A Coenzyme B12-dependent 53.2 32 0.0011 26.0 6.0 56 75-141 40-96 (161)
257 3tzq_B Short-chain type dehydr 52.8 93 0.0032 25.4 9.7 69 34-107 9-77 (271)
258 4g81_D Putative hexonate dehyd 52.2 86 0.003 25.6 9.0 98 34-137 7-116 (255)
259 3rd5_A Mypaa.01249.C; ssgcid, 52.2 27 0.00092 29.1 6.1 76 34-114 14-91 (291)
260 4hp8_A 2-deoxy-D-gluconate 3-d 51.3 66 0.0023 26.2 8.0 99 34-137 7-109 (247)
261 3m1a_A Putative dehydrogenase; 50.7 65 0.0022 26.4 8.2 65 37-106 6-70 (281)
262 3ppi_A 3-hydroxyacyl-COA dehyd 50.7 45 0.0015 27.4 7.2 67 35-106 29-95 (281)
263 1b93_A Protein (methylglyoxal 50.4 24 0.00083 26.4 4.7 93 48-151 25-121 (152)
264 3gvc_A Oxidoreductase, probabl 50.3 45 0.0016 27.5 7.1 96 36-136 29-132 (277)
265 1jr2_A Uroporphyrinogen-III sy 49.8 19 0.00064 30.2 4.6 65 22-90 123-189 (286)
266 4gkb_A 3-oxoacyl-[acyl-carrier 48.4 1.1E+02 0.0038 25.0 9.6 98 33-136 4-111 (258)
267 1qys_A TOP7; alpha-beta, novel 48.1 34 0.0012 21.9 4.4 31 318-348 45-76 (106)
268 4eso_A Putative oxidoreductase 47.7 64 0.0022 26.1 7.6 67 35-106 7-73 (255)
269 1uls_A Putative 3-oxoacyl-acyl 47.2 94 0.0032 24.9 8.5 95 35-136 4-106 (245)
270 3h7a_A Short chain dehydrogena 46.7 1.1E+02 0.0039 24.6 9.8 68 34-106 5-75 (252)
271 3pxx_A Carveol dehydrogenase; 46.6 51 0.0017 27.2 6.9 97 35-136 9-126 (287)
272 3n74_A 3-ketoacyl-(acyl-carrie 46.3 78 0.0027 25.5 8.0 68 34-106 7-74 (261)
273 2ew8_A (S)-1-phenylethanol deh 45.1 1.2E+02 0.004 24.3 9.4 67 35-106 6-73 (249)
274 1tks_A 3,4-dihydroxy-2-butanon 44.7 22 0.00077 28.0 3.9 38 107-148 157-194 (204)
275 2j9r_A Thymidine kinase; TK1, 44.2 58 0.002 25.9 6.4 92 46-152 43-137 (214)
276 1y80_A Predicted cobalamin bin 44.1 69 0.0024 25.1 7.0 56 75-141 110-166 (210)
277 3guy_A Short-chain dehydrogena 43.0 48 0.0016 26.3 6.0 93 39-136 4-101 (230)
278 4fn4_A Short chain dehydrogena 42.6 91 0.0031 25.5 7.6 98 34-137 5-115 (254)
279 1hxh_A 3BETA/17BETA-hydroxyste 42.4 1.3E+02 0.0043 24.2 8.6 67 35-106 5-71 (253)
280 1vl8_A Gluconate 5-dehydrogena 42.4 1.2E+02 0.004 24.7 8.5 98 34-136 19-128 (267)
281 3ndz_A Endoglucanase D; cellot 42.1 50 0.0017 28.4 6.3 57 74-153 48-106 (345)
282 3vnd_A TSA, tryptophan synthas 42.1 52 0.0018 27.2 6.0 14 75-88 117-130 (267)
283 3pff_A ATP-citrate synthase; p 41.1 47 0.0016 32.5 6.3 76 67-153 550-627 (829)
284 2whl_A Beta-mannanase, baman5; 40.9 51 0.0017 27.5 6.0 16 75-90 38-53 (294)
285 3op4_A 3-oxoacyl-[acyl-carrier 40.7 79 0.0027 25.4 7.0 97 35-136 8-112 (248)
286 3icg_A Endoglucanase D; cellul 40.3 50 0.0017 30.3 6.3 58 73-153 50-109 (515)
287 4ibo_A Gluconate dehydrogenase 40.3 1.3E+02 0.0045 24.5 8.5 98 34-136 24-132 (271)
288 3t7c_A Carveol dehydrogenase; 40.2 1.6E+02 0.0054 24.4 9.2 98 34-136 26-147 (299)
289 1hjs_A Beta-1,4-galactanase; 4 39.6 1.8E+02 0.0061 24.8 9.5 76 72-155 10-85 (332)
290 2zcu_A Uncharacterized oxidore 39.5 1.4E+02 0.0047 24.2 8.5 93 39-144 2-96 (286)
291 1hdc_A 3-alpha, 20 beta-hydrox 39.4 1.1E+02 0.0037 24.6 7.7 68 35-107 4-71 (254)
292 3nco_A Endoglucanase fncel5A; 38.8 64 0.0022 27.2 6.4 18 73-90 46-63 (320)
293 3f9i_A 3-oxoacyl-[acyl-carrier 38.7 73 0.0025 25.5 6.5 76 35-115 13-90 (249)
294 4fc7_A Peroxisomal 2,4-dienoyl 38.3 1.6E+02 0.0054 24.0 8.7 97 35-136 26-134 (277)
295 1ccw_A Protein (glutamate muta 38.1 65 0.0022 23.4 5.5 56 75-141 25-81 (137)
296 3tha_A Tryptophan synthase alp 37.1 78 0.0027 25.9 6.2 82 61-147 118-203 (252)
297 3lyl_A 3-oxoacyl-(acyl-carrier 37.0 1.4E+02 0.0047 23.7 8.0 97 35-136 4-111 (247)
298 3rht_A (gatase1)-like protein; 36.5 1.5E+02 0.0051 24.3 7.9 67 73-151 22-88 (259)
299 3l6e_A Oxidoreductase, short-c 36.3 97 0.0033 24.6 6.8 95 37-136 4-106 (235)
300 1x1t_A D(-)-3-hydroxybutyrate 36.3 1.7E+02 0.0057 23.5 9.1 95 37-136 5-112 (260)
301 2pnf_A 3-oxoacyl-[acyl-carrier 36.3 1.6E+02 0.0054 23.3 8.3 79 34-117 5-93 (248)
302 4dyv_A Short-chain dehydrogena 35.9 1.1E+02 0.0039 25.0 7.3 94 38-136 29-132 (272)
303 3ayr_A Endoglucanase; TIM barr 35.9 79 0.0027 27.5 6.6 24 128-152 102-125 (376)
304 3sx2_A Putative 3-ketoacyl-(ac 35.7 1.5E+02 0.0053 24.0 8.2 69 34-107 11-94 (278)
305 3dqp_A Oxidoreductase YLBE; al 35.5 1.5E+02 0.0052 22.9 8.1 92 39-141 3-96 (219)
306 2jah_A Clavulanic acid dehydro 35.5 1.7E+02 0.0057 23.3 8.3 97 35-136 6-113 (247)
307 2wsb_A Galactitol dehydrogenas 35.3 1.5E+02 0.0051 23.5 8.0 79 34-117 9-93 (254)
308 1nff_A Putative oxidoreductase 35.3 1.6E+02 0.0053 23.8 8.1 68 35-107 6-73 (260)
309 3ak4_A NADH-dependent quinucli 35.2 1.6E+02 0.0054 23.7 8.1 33 35-67 11-43 (263)
310 3qlj_A Short chain dehydrogena 35.2 1.5E+02 0.0051 24.9 8.2 97 35-136 26-143 (322)
311 3tsc_A Putative oxidoreductase 35.1 1.2E+02 0.0041 24.8 7.4 98 34-136 9-130 (277)
312 3uve_A Carveol dehydrogenase ( 35.0 1.2E+02 0.004 25.0 7.3 34 34-67 9-42 (286)
313 3ai3_A NADPH-sorbose reductase 34.9 1.8E+02 0.006 23.4 8.6 69 34-107 5-77 (263)
314 1pjq_A CYSG, siroheme synthase 34.9 1.1E+02 0.0037 27.6 7.5 95 34-151 10-106 (457)
315 3dz1_A Dihydrodipicolinate syn 34.9 1.3E+02 0.0046 25.4 7.7 69 76-151 97-172 (313)
316 1iuk_A Hypothetical protein TT 34.8 24 0.00081 25.9 2.6 21 132-153 107-127 (140)
317 3tjr_A Short chain dehydrogena 34.7 1.7E+02 0.0057 24.3 8.3 97 35-136 30-137 (301)
318 3gaf_A 7-alpha-hydroxysteroid 34.2 1.5E+02 0.0052 23.8 7.8 98 34-136 10-117 (256)
319 3rkr_A Short chain oxidoreduct 34.2 1.8E+02 0.0062 23.3 8.5 97 35-136 28-136 (262)
320 3jug_A Beta-mannanase; TIM-bar 33.8 46 0.0016 28.8 4.6 22 128-150 86-107 (345)
321 4dmm_A 3-oxoacyl-[acyl-carrier 33.6 1.1E+02 0.0039 24.9 7.0 98 34-136 26-135 (269)
322 3cpr_A Dihydrodipicolinate syn 33.5 1.5E+02 0.0053 24.8 7.8 63 84-148 21-90 (304)
323 3sxp_A ADP-L-glycero-D-mannohe 33.3 2.2E+02 0.0076 24.1 9.9 106 35-147 9-134 (362)
324 3kux_A Putative oxidoreductase 33.3 99 0.0034 26.5 6.8 71 69-150 55-125 (352)
325 3pzt_A Endoglucanase; alpha/be 33.2 60 0.0021 27.7 5.3 23 128-151 104-126 (327)
326 7a3h_A Endoglucanase; hydrolas 33.0 59 0.002 27.3 5.2 22 129-151 80-101 (303)
327 3qr3_A Endoglucanase EG-II; TI 33.0 69 0.0024 27.5 5.6 56 75-153 50-107 (340)
328 3ruf_A WBGU; rossmann fold, UD 32.9 2.2E+02 0.0075 23.9 10.4 101 35-144 24-143 (351)
329 2wkj_A N-acetylneuraminate lya 32.8 1.2E+02 0.0042 25.4 7.1 76 71-148 3-85 (303)
330 1fob_A Beta-1,4-galactanase; B 32.7 2.3E+02 0.0079 24.1 9.5 76 72-155 10-85 (334)
331 3eb2_A Putative dihydrodipicol 32.6 1.9E+02 0.0064 24.3 8.2 37 110-151 131-167 (300)
332 3ucx_A Short chain dehydrogena 32.5 1.8E+02 0.006 23.5 8.0 68 34-106 9-79 (264)
333 2d59_A Hypothetical protein PH 32.5 60 0.0021 23.8 4.5 44 99-153 91-134 (144)
334 3m9w_A D-xylose-binding peripl 32.4 1.2E+02 0.0041 25.0 7.1 63 75-148 26-88 (313)
335 3l55_A B-1,4-endoglucanase/cel 32.4 63 0.0021 28.0 5.3 58 73-153 57-114 (353)
336 4h1h_A LMO1638 protein; MCCF-l 32.3 1.1E+02 0.0037 26.1 6.8 71 57-127 9-96 (327)
337 3tfo_A Putative 3-oxoacyl-(acy 32.1 1.9E+02 0.0064 23.5 8.1 95 37-136 5-110 (264)
338 3o63_A Probable thiamine-phosp 31.9 53 0.0018 26.7 4.5 50 99-150 46-103 (243)
339 2a4k_A 3-oxoacyl-[acyl carrier 31.8 1.5E+02 0.0051 24.0 7.4 68 35-107 5-72 (263)
340 3ged_A Short-chain dehydrogena 31.5 1.6E+02 0.0055 23.8 7.4 93 38-137 4-105 (247)
341 1xrs_B D-lysine 5,6-aminomutas 31.5 1.8E+02 0.0062 23.9 7.6 57 77-141 152-210 (262)
342 3tla_A MCCF; serine protease, 31.4 1.8E+02 0.0062 25.3 8.0 72 57-128 40-128 (371)
343 3is3_A 17BETA-hydroxysteroid d 31.4 1.1E+02 0.0039 24.8 6.6 97 35-136 17-125 (270)
344 3qfe_A Putative dihydrodipicol 31.2 2.4E+02 0.0081 23.9 8.6 40 109-151 139-178 (318)
345 3pgx_A Carveol dehydrogenase; 31.1 1.4E+02 0.0047 24.4 7.2 98 34-136 13-134 (280)
346 2rhc_B Actinorhodin polyketide 31.1 2E+02 0.0068 23.4 8.1 68 35-107 21-91 (277)
347 2fp4_A Succinyl-COA ligase [GD 31.1 52 0.0018 27.9 4.4 77 68-154 58-134 (305)
348 3l5o_A Uncharacterized protein 31.0 63 0.0022 26.8 4.8 77 60-147 141-217 (270)
349 1h1n_A Endo type cellulase ENG 31.0 1.1E+02 0.0037 25.6 6.5 23 129-152 72-94 (305)
350 3l77_A Short-chain alcohol deh 30.8 1.9E+02 0.0066 22.6 9.0 94 38-136 4-109 (235)
351 2orv_A Thymidine kinase; TP4A 30.8 1.6E+02 0.0056 23.7 7.1 91 46-154 34-127 (234)
352 3rih_A Short chain dehydrogena 30.7 2.3E+02 0.0078 23.4 9.5 98 34-136 39-148 (293)
353 1jak_A Beta-N-acetylhexosamini 30.7 78 0.0027 29.1 5.8 68 75-147 181-248 (512)
354 3dmy_A Protein FDRA; predicted 30.6 48 0.0016 30.2 4.3 74 66-151 20-94 (480)
355 3dm5_A SRP54, signal recogniti 30.4 1.3E+02 0.0045 27.0 7.1 98 46-153 114-225 (443)
356 2xw6_A MGS, methylglyoxal synt 30.4 47 0.0016 24.2 3.5 70 75-151 42-113 (134)
357 3sju_A Keto reductase; short-c 30.4 1.9E+02 0.0064 23.6 7.8 96 36-136 24-130 (279)
358 3tl3_A Short-chain type dehydr 30.3 1.3E+02 0.0045 24.1 6.8 64 35-106 8-71 (257)
359 3sc4_A Short chain dehydrogena 30.2 2.3E+02 0.0077 23.2 10.3 98 34-136 7-122 (285)
360 2c07_A 3-oxoacyl-(acyl-carrier 30.2 2.2E+02 0.0077 23.2 10.1 65 37-106 45-112 (285)
361 3ohs_X Trans-1,2-dihydrobenzen 30.1 91 0.0031 26.5 6.0 72 69-151 54-125 (334)
362 3s5o_A 4-hydroxy-2-oxoglutarat 29.9 2.5E+02 0.0085 23.6 9.3 70 77-151 105-179 (307)
363 4e5s_A MCCFLIKE protein (BA_56 29.9 2E+02 0.0069 24.5 8.0 71 57-127 9-96 (331)
364 3db2_A Putative NADPH-dependen 29.9 1.3E+02 0.0045 25.7 7.0 73 69-152 54-126 (354)
365 4f6o_A Metacaspase-1; rossmann 29.8 1.1E+02 0.0039 26.3 6.4 51 21-73 78-141 (350)
366 4gqr_A Pancreatic alpha-amylas 29.8 39 0.0013 30.5 3.7 29 127-156 75-103 (496)
367 1fmc_A 7 alpha-hydroxysteroid 29.7 2.1E+02 0.0071 22.6 8.7 78 35-117 10-96 (255)
368 1xp8_A RECA protein, recombina 29.6 1.3E+02 0.0045 26.1 6.9 53 38-90 51-111 (366)
369 2r6j_A Eugenol synthase 1; phe 29.6 2E+02 0.0069 23.8 8.1 96 38-148 13-112 (318)
370 3awd_A GOX2181, putative polyo 29.5 2.1E+02 0.0073 22.7 8.4 78 35-117 12-98 (260)
371 3s55_A Putative short-chain de 29.5 2.3E+02 0.0078 23.0 8.8 98 34-136 8-128 (281)
372 3r1i_A Short-chain type dehydr 29.4 2.3E+02 0.0079 23.1 9.5 98 34-136 30-138 (276)
373 3ksm_A ABC-type sugar transpor 29.3 59 0.002 26.3 4.5 64 75-147 24-88 (276)
374 3v2h_A D-beta-hydroxybutyrate 29.3 2.3E+02 0.008 23.1 8.6 97 35-136 24-133 (281)
375 3gh5_A HEX1, beta-hexosaminida 29.2 88 0.003 28.8 5.8 68 75-147 206-273 (525)
376 3oec_A Carveol dehydrogenase ( 29.1 1.5E+02 0.0051 24.9 7.1 97 35-136 45-164 (317)
377 3nav_A Tryptophan synthase alp 29.0 1.6E+02 0.0056 24.3 7.0 10 78-87 122-131 (271)
378 3si9_A DHDPS, dihydrodipicolin 29.0 1.2E+02 0.0042 25.7 6.4 69 77-151 113-186 (315)
379 1zk4_A R-specific alcohol dehy 28.9 2.1E+02 0.0073 22.5 7.9 33 35-67 5-37 (251)
380 3aof_A Endoglucanase; glycosyl 28.8 1.1E+02 0.0039 25.5 6.3 18 73-90 38-55 (317)
381 1iy8_A Levodione reductase; ox 28.2 2.3E+02 0.008 22.7 8.3 68 35-107 12-84 (267)
382 3i6i_A Putative leucoanthocyan 28.2 1.8E+02 0.0061 24.5 7.6 98 36-148 10-116 (346)
383 3ezl_A Acetoacetyl-COA reducta 28.1 1.7E+02 0.0059 23.3 7.2 66 36-106 12-82 (256)
384 2ae2_A Protein (tropinone redu 28.0 2.3E+02 0.0079 22.6 9.0 68 34-106 7-77 (260)
385 3e18_A Oxidoreductase; dehydro 27.7 1.1E+02 0.0038 26.3 6.2 73 68-151 52-124 (359)
386 3nyw_A Putative oxidoreductase 27.6 2.1E+02 0.0071 22.9 7.5 34 35-68 6-39 (250)
387 2jl1_A Triphenylmethane reduct 27.6 2.4E+02 0.0083 22.7 8.7 95 39-144 3-99 (287)
388 3cxt_A Dehydrogenase with diff 27.5 2.3E+02 0.0078 23.3 7.9 69 34-107 32-103 (291)
389 3bzy_B ESCU; auto cleavage pro 27.4 33 0.0011 22.7 2.0 20 131-151 29-48 (83)
390 3l21_A DHDPS, dihydrodipicolin 27.4 2.7E+02 0.0094 23.3 8.5 69 76-151 105-178 (304)
391 3bk2_A RNAse J, metal dependen 27.2 1.2E+02 0.0042 28.1 6.6 78 58-144 337-423 (562)
392 3uug_A Multiple sugar-binding 27.2 1.1E+02 0.0038 25.4 6.0 63 75-148 27-89 (330)
393 3m05_A Uncharacterized protein 27.2 84 0.0029 22.1 4.2 52 293-345 17-71 (114)
394 3rjz_A N-type ATP pyrophosphat 27.1 2.5E+02 0.0085 22.7 9.7 99 38-147 7-120 (237)
395 1w6u_A 2,4-dienoyl-COA reducta 27.0 2.5E+02 0.0086 23.0 8.2 66 36-106 26-95 (302)
396 1g57_A DHBP synthase, 3,4-dihy 26.9 1E+02 0.0035 24.5 5.1 36 108-148 166-201 (217)
397 3u5t_A 3-oxoacyl-[acyl-carrier 26.9 2.5E+02 0.0086 22.7 9.2 97 35-136 26-134 (267)
398 1h7n_A 5-aminolaevulinic acid 26.8 1.1E+02 0.0038 26.1 5.5 26 131-156 113-138 (342)
399 1wky_A Endo-beta-1,4-mannanase 26.7 1.1E+02 0.0037 27.6 6.0 24 127-151 70-93 (464)
400 2cfc_A 2-(R)-hydroxypropyl-COM 26.5 2.1E+02 0.0071 22.6 7.3 75 38-117 4-88 (250)
401 2uvd_A 3-oxoacyl-(acyl-carrier 26.4 2.4E+02 0.0082 22.3 8.0 96 36-136 4-111 (246)
402 4b79_A PA4098, probable short- 26.4 2.6E+02 0.0087 22.6 8.3 93 36-137 11-106 (242)
403 3mio_A DHBP synthase, 3,4-dihy 26.4 92 0.0031 24.6 4.7 37 108-148 157-194 (206)
404 3rot_A ABC sugar transporter, 26.1 72 0.0025 26.2 4.5 65 75-148 27-91 (297)
405 3ecs_A Translation initiation 26.0 2.7E+02 0.0092 23.6 7.9 104 34-149 119-229 (315)
406 1wjw_A Phosphoacetylglucosamin 26.0 1.7E+02 0.0057 20.3 5.9 39 306-347 58-97 (112)
407 3ijr_A Oxidoreductase, short c 26.0 2.7E+02 0.0094 22.8 9.2 66 36-106 47-116 (291)
408 1g94_A Alpha-amylase; beta-alp 25.8 55 0.0019 29.3 3.9 29 128-157 64-92 (448)
409 1geg_A Acetoin reductase; SDR 25.7 2.5E+02 0.0087 22.3 8.0 65 38-107 4-71 (256)
410 3sr3_A Microcin immunity prote 25.6 2.6E+02 0.009 23.8 8.0 71 57-127 10-97 (336)
411 3oqb_A Oxidoreductase; structu 25.5 2.3E+02 0.0079 24.4 7.9 72 69-151 71-142 (383)
412 3l6u_A ABC-type sugar transpor 25.4 90 0.0031 25.5 5.0 62 75-147 32-93 (293)
413 3qp9_A Type I polyketide synth 25.4 2.7E+02 0.0093 25.4 8.6 98 34-136 248-371 (525)
414 4df3_A Fibrillarin-like rRNA/T 25.3 2E+02 0.0067 23.1 6.7 124 19-153 58-186 (233)
415 3io5_A Recombination and repai 25.2 1.7E+02 0.0058 25.1 6.5 84 60-148 58-167 (333)
416 2hmc_A AGR_L_411P, dihydrodipi 25.2 1.1E+02 0.0036 26.5 5.4 55 92-148 39-97 (344)
417 3vc3_A Beta-cyanoalnine syntha 25.2 1.6E+02 0.0054 25.3 6.6 53 37-89 88-141 (344)
418 3e48_A Putative nucleoside-dip 25.1 1.5E+02 0.0051 24.2 6.3 94 39-144 3-98 (289)
419 2jep_A Xyloglucanase; family 5 25.0 1.5E+02 0.0053 25.7 6.6 25 128-153 109-133 (395)
420 3mfq_A TROA, high-affinity zin 24.8 1.5E+02 0.0053 24.5 6.2 76 61-147 163-242 (282)
421 3i23_A Oxidoreductase, GFO/IDH 24.7 1.2E+02 0.0039 26.0 5.7 71 70-151 54-124 (349)
422 3na8_A Putative dihydrodipicol 24.6 1.4E+02 0.0046 25.4 5.9 69 77-151 115-188 (315)
423 3qiv_A Short-chain dehydrogena 24.6 2.6E+02 0.009 22.1 8.5 68 34-106 7-77 (253)
424 3gdo_A Uncharacterized oxidore 24.6 1.3E+02 0.0045 25.8 6.0 72 69-151 53-124 (358)
425 4df3_A Fibrillarin-like rRNA/T 24.6 1.3E+02 0.0045 24.2 5.5 14 58-71 76-89 (233)
426 1qyd_A Pinoresinol-lariciresin 24.4 2.9E+02 0.01 22.6 9.3 97 37-145 5-110 (313)
427 3s5o_A 4-hydroxy-2-oxoglutarat 24.1 1.5E+02 0.0052 24.9 6.1 56 92-148 27-88 (307)
428 2vc6_A MOSA, dihydrodipicolina 24.1 1.4E+02 0.0047 24.9 5.8 68 78-151 92-164 (292)
429 1edg_A Endoglucanase A; family 24.1 1.1E+02 0.0036 26.7 5.3 25 128-153 100-124 (380)
430 1w3i_A EDA, 2-keto-3-deoxy glu 24.0 1.9E+02 0.0066 24.0 6.7 48 93-141 13-64 (293)
431 3o38_A Short chain dehydrogena 24.0 2.3E+02 0.0079 22.7 7.2 97 35-136 21-130 (266)
432 1ae1_A Tropinone reductase-I; 24.0 2.9E+02 0.0098 22.3 8.9 68 34-106 19-89 (273)
433 3b4u_A Dihydrodipicolinate syn 23.9 2E+02 0.0069 23.9 6.8 48 93-141 17-68 (294)
434 2rfg_A Dihydrodipicolinate syn 23.7 1.6E+02 0.0056 24.6 6.2 67 78-151 92-163 (297)
435 1vmd_A MGS, methylglyoxal synt 23.6 75 0.0026 24.4 3.6 104 37-151 28-137 (178)
436 3edm_A Short chain dehydrogena 23.5 2.8E+02 0.0097 22.1 9.5 69 34-107 6-78 (259)
437 2kfp_A Pspto_3016 protein; alp 23.5 1.3E+02 0.0044 21.4 4.8 39 298-338 71-111 (125)
438 3flu_A DHDPS, dihydrodipicolin 23.4 2E+02 0.0069 24.0 6.8 69 76-151 97-170 (297)
439 1lwj_A 4-alpha-glucanotransfer 23.4 68 0.0023 28.6 4.0 28 128-156 69-96 (441)
440 3kvo_A Hydroxysteroid dehydrog 23.4 3.4E+02 0.012 23.0 11.5 67 36-107 45-121 (346)
441 3nl6_A Thiamine biosynthetic b 23.4 80 0.0027 29.2 4.5 49 99-150 28-76 (540)
442 1vhx_A Putative holliday junct 23.3 1.3E+02 0.0044 22.3 4.9 58 96-154 41-102 (150)
443 2g1u_A Hypothetical protein TM 23.2 2.2E+02 0.0074 20.6 7.1 97 34-147 17-115 (155)
444 3a28_C L-2.3-butanediol dehydr 23.2 2.9E+02 0.0098 22.0 7.9 64 38-106 4-72 (258)
445 1c7s_A Beta-N-acetylhexosamini 23.2 2.5E+02 0.0085 27.7 8.0 111 35-147 267-417 (858)
446 4ew6_A D-galactose-1-dehydroge 23.2 73 0.0025 27.1 4.0 73 69-152 68-141 (330)
447 1sb8_A WBPP; epimerase, 4-epim 23.2 3.1E+02 0.011 23.0 8.2 112 21-144 17-145 (352)
448 2vt1_B Surface presentation of 23.1 44 0.0015 22.6 2.0 21 130-151 28-48 (93)
449 3flu_A DHDPS, dihydrodipicolin 23.1 2.1E+02 0.0071 23.9 6.8 59 89-148 17-81 (297)
450 1x7f_A Outer surface protein; 23.0 1.1E+02 0.0036 27.0 4.9 26 128-154 73-98 (385)
451 2ehh_A DHDPS, dihydrodipicolin 23.0 1.6E+02 0.0053 24.6 6.0 69 77-151 91-164 (294)
452 3moi_A Probable dehydrogenase; 23.0 1.3E+02 0.0045 26.1 5.8 70 69-149 52-121 (387)
453 1ht6_A AMY1, alpha-amylase iso 23.0 69 0.0024 28.2 3.9 28 128-156 68-95 (405)
454 3l21_A DHDPS, dihydrodipicolin 22.9 2.1E+02 0.0071 24.1 6.7 62 86-148 22-89 (304)
455 1xkq_A Short-chain reductase f 22.9 2.3E+02 0.0077 23.1 7.0 33 35-67 5-37 (280)
456 3enk_A UDP-glucose 4-epimerase 22.8 2.5E+02 0.0086 23.3 7.5 102 37-144 6-121 (341)
457 3h5d_A DHDPS, dihydrodipicolin 22.7 1.9E+02 0.0065 24.4 6.5 50 97-151 117-171 (311)
458 1mxg_A Alpha amylase; hyperthe 22.7 69 0.0024 28.6 3.9 29 127-156 85-113 (435)
459 1vjz_A Endoglucanase; TM1752, 22.7 1.3E+02 0.0044 25.5 5.6 24 128-152 76-99 (341)
460 1qyc_A Phenylcoumaran benzylic 22.6 1.6E+02 0.0055 24.2 6.1 96 37-147 5-109 (308)
461 2r91_A 2-keto-3-deoxy-(6-phosp 22.6 2E+02 0.0068 23.8 6.5 26 322-347 259-285 (286)
462 3v5n_A Oxidoreductase; structu 22.6 2.5E+02 0.0086 24.7 7.6 74 69-153 93-171 (417)
463 4egf_A L-xylulose reductase; s 22.6 2.9E+02 0.0098 22.2 7.5 57 35-91 19-79 (266)
464 3dhn_A NAD-dependent epimerase 22.6 2.4E+02 0.0082 21.7 6.9 71 37-117 5-75 (227)
465 2r8w_A AGR_C_1641P; APC7498, d 22.6 1.8E+02 0.006 24.9 6.3 68 77-151 125-197 (332)
466 2gjx_A Beta-hexosaminidase alp 22.5 90 0.0031 28.6 4.6 103 36-147 100-232 (507)
467 3ic5_A Putative saccharopine d 22.5 1.8E+02 0.0061 19.4 7.9 91 37-147 6-97 (118)
468 1spx_A Short-chain reductase f 22.5 1.9E+02 0.0065 23.4 6.4 32 36-67 6-37 (278)
469 2i2x_B MTAC, methyltransferase 22.4 1.5E+02 0.0053 24.1 5.7 56 75-141 145-201 (258)
470 2nuw_A 2-keto-3-deoxygluconate 22.4 1.8E+02 0.0061 24.2 6.2 48 93-141 13-64 (288)
471 4h27_A L-serine dehydratase/L- 22.4 1.7E+02 0.0057 25.4 6.2 53 36-88 93-146 (364)
472 1xhl_A Short-chain dehydrogena 22.3 2.2E+02 0.0076 23.5 6.9 33 35-67 25-57 (297)
473 3e9m_A Oxidoreductase, GFO/IDH 22.1 1.5E+02 0.0051 25.0 5.8 73 69-152 55-127 (330)
474 3i1j_A Oxidoreductase, short c 22.0 2.7E+02 0.0093 21.9 7.2 35 35-69 13-47 (247)
475 1yht_A DSPB; beta barrel, hydr 22.0 1.8E+02 0.0061 25.3 6.3 69 75-147 40-112 (367)
476 3imf_A Short chain dehydrogena 22.0 3E+02 0.01 21.9 8.0 97 35-136 5-112 (257)
477 3m5v_A DHDPS, dihydrodipicolin 21.9 3.5E+02 0.012 22.5 9.4 68 78-151 100-172 (301)
478 3v8b_A Putative dehydrogenase, 21.8 3.3E+02 0.011 22.2 8.2 69 34-107 26-97 (283)
479 1gcy_A Glucan 1,4-alpha-maltot 21.8 75 0.0026 29.2 4.0 29 128-157 92-120 (527)
480 2z1n_A Dehydrogenase; reductas 21.8 3.1E+02 0.01 21.9 9.0 33 35-67 6-38 (260)
481 4hkt_A Inositol 2-dehydrogenas 21.7 1.7E+02 0.0057 24.7 6.1 72 70-152 52-123 (331)
482 1snn_A DHBP synthase, 3,4-dihy 21.7 99 0.0034 24.8 4.1 36 108-148 177-212 (227)
483 3fkr_A L-2-keto-3-deoxyarabona 21.6 2.7E+02 0.0093 23.4 7.2 72 76-152 98-175 (309)
484 2bgk_A Rhizome secoisolaricire 21.5 3.2E+02 0.011 21.9 8.2 33 35-67 15-47 (278)
485 3si9_A DHDPS, dihydrodipicolin 21.5 2E+02 0.0069 24.3 6.4 62 86-148 29-96 (315)
486 2q2v_A Beta-D-hydroxybutyrate 21.4 3.1E+02 0.011 21.8 10.4 95 36-135 4-107 (255)
487 2b4q_A Rhamnolipids biosynthes 21.3 3.3E+02 0.011 22.1 8.3 67 35-107 28-97 (276)
488 1yxm_A Pecra, peroxisomal tran 21.3 3.4E+02 0.012 22.2 8.7 68 35-107 17-92 (303)
489 1zh8_A Oxidoreductase; TM0312, 21.3 1.6E+02 0.0053 25.1 5.8 72 70-152 71-142 (340)
490 3fkr_A L-2-keto-3-deoxyarabona 21.2 3.5E+02 0.012 22.6 7.9 69 38-107 79-162 (309)
491 1i1q_B Anthranilate synthase c 21.2 2.4E+02 0.0082 21.4 6.4 72 63-147 3-80 (192)
492 4id9_A Short-chain dehydrogena 21.1 3.6E+02 0.012 22.4 9.3 94 35-144 18-118 (347)
493 3dz1_A Dihydrodipicolinate syn 21.1 1.7E+02 0.0059 24.6 5.9 59 89-148 18-81 (313)
494 3tak_A DHDPS, dihydrodipicolin 21.1 2E+02 0.0067 24.0 6.2 68 77-151 92-164 (291)
495 3o1l_A Formyltetrahydrofolate 21.1 2E+02 0.007 24.2 6.2 89 40-133 110-201 (302)
496 3l6b_A Serine racemase; pyrido 21.1 2E+02 0.0067 24.7 6.3 55 35-89 75-130 (346)
497 1w3i_A EDA, 2-keto-3-deoxy glu 20.8 2.5E+02 0.0086 23.3 6.8 32 112-151 126-157 (293)
498 4iin_A 3-ketoacyl-acyl carrier 20.7 3.3E+02 0.011 21.9 9.8 101 31-136 24-136 (271)
499 4fb5_A Probable oxidoreductase 20.7 1.5E+02 0.0053 25.4 5.8 26 126-152 129-154 (393)
500 2nuw_A 2-keto-3-deoxygluconate 20.7 2.7E+02 0.0092 23.1 6.9 11 61-71 93-103 (288)
No 1
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=4.5e-47 Score=346.07 Aligned_cols=320 Identities=40% Similarity=0.665 Sum_probs=281.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..|..++| +.++++++ ++|..+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|
T Consensus 63 ~y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g 136 (385)
T 1b5p_A 63 KYAPPAGIPELR------EALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG 136 (385)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTT
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcC
Confidence 577778899999 99999999 78888889999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++.++++.+|+++|+++++++++++++++||||||.++|.+++++|+++|+++ |+++|+||+|+.+.+++ .
T Consensus 137 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~-~ 214 (385)
T 1b5p_A 137 GVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEH-DFYLVSDEIYEHLLYEG-E 214 (385)
T ss_dssp CEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBSSS-C
T ss_pred CEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEEccchhcccCC-C
Confidence 999999997545678999999999988899999999999999999999999999999999 99999999999988766 4
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..++..+.. +++++++|+||.+|++|+|+||+++++++++.+.......+.+++.+.+.++.++++......+++++.
T Consensus 215 ~~~~~~~~~--~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 292 (385)
T 1b5p_A 215 HFSPGRVAP--EHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMA 292 (385)
T ss_dssp CCCGGGTCT--TTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCCHHHcCC--CCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHH
Confidence 455665533 789999999999999999999999999999998887666667889999999988886300014568888
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
++.++++++.+.+.|+++ |+.+..+++++++|+.++... .+..++.+.|.+ .||.+.||..|+.++++
T Consensus 293 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~l~~-~gv~v~~g~~f~~~~~i 360 (385)
T 1b5p_A 293 REAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIA----------PDEVRAAERLLE-AGVAVVPGTDFAAFGHV 360 (385)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCCBCCCSBTTEEEEECTTTC----------SSHHHHHHHHHH-TTEECEESGGGTCTTEE
T ss_pred HHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecCCCC----------CCHHHHHHHHHH-CCeEEecccccCCCCeE
Confidence 999999999999999988 888888889999999886310 167889999885 59999999988778899
Q ss_pred EEEeecCHHHHHHHHHHHHHHHh
Q 018665 322 RISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~ 344 (352)
||+++.+++++++++++|+++++
T Consensus 361 Ris~~~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 361 RLSYATSEENLRKALERFARVLG 383 (385)
T ss_dssp EEECCSCHHHHHHHHHHGGGGC-
T ss_pred EEEecCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999988765
No 2
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=5e-46 Score=339.54 Aligned_cols=325 Identities=43% Similarity=0.775 Sum_probs=286.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|++..|..++| +.++++++ .+|.++++++|++++|+++++..++.+++++||+|+++.|+|.++...++..
T Consensus 61 ~~y~~~~g~~~l~------~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~ 134 (388)
T 1j32_A 61 TRYGPAAGEPRLR------EAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLA 134 (388)
T ss_dssp CSCCCTTCCHHHH------HHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHT
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc
Confidence 3577788899999 99999999 7788778899999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++.+.+.++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++.
T Consensus 135 g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~ 213 (388)
T 1j32_A 135 EGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEA-GLWVLSDEIYEKILYDDA 213 (388)
T ss_dssp TCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTC
T ss_pred CCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCC
Confidence 9999999987545677899999999988899999999999999999999999999999999 999999999999888765
Q ss_pred CccccccCCCC-CCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 161 THTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 161 ~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
...++..+..+ .++++++.|+||.+|++|+|+||+++++++++.+.......+.+++++.+.++.++++. ..++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~ 290 (388)
T 1j32_A 214 QHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN---SQDCVQ 290 (388)
T ss_dssp CCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS---CSHHHH
T ss_pred CCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---CcHHHH
Confidence 55555555321 45789999999999989999999999999999988877666778899999988888875 257788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+.+++++++++++.+.|++++++.+..+.+++++|++++... .+..++.+.|.+++||.+.+|..|+.++
T Consensus 291 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~ 360 (388)
T 1j32_A 291 EMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTG----------RSSLDFCSELLDQHQVATVPGAAFGADD 360 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGT----------CCHHHHHHHHHHHHCEECEEGGGGTCTT
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCC----------CCHHHHHHHHHHhCCEEEeChhhhCCCC
Confidence 899999999999999999988999888888998998876410 1678899999875699999998887789
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 320 CIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
++|++++.+++++++++++|+++++++
T Consensus 361 ~iRis~~~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 361 CIRLSYATDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp BEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 999999989999999999999998764
No 3
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=6.3e-46 Score=342.56 Aligned_cols=335 Identities=28% Similarity=0.508 Sum_probs=289.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|++..|..++| +.++++++ .+|+++++ ++|++++|+++++..++.+++++||+|+++.|+|.++...++.
T Consensus 61 ~~y~~~~g~~~lr------~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~ 134 (422)
T 3fvs_A 61 NQYTKTFGYPPLT------KILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMM 134 (422)
T ss_dssp GSCCCTTCCHHHH------HHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHH
Confidence 3688888999999 99999999 88988888 7999999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccC----------CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 80 ADATPVILPTRI----------SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 80 ~g~~v~~i~~~~----------~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
.|.+++.++++. ..++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+|
T Consensus 135 ~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~D 213 (422)
T 3fvs_A 135 AGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCITD 213 (422)
T ss_dssp TTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEE
T ss_pred cCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEE
Confidence 999999999875 23567899999999998999999999999999999999999999999999 9999999
Q ss_pred ccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhc
Q 018665 150 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALG 229 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 229 (352)
|+|+++.+++....++..+...+++++++.|+||.+|++|+|+||+++++++++.+.......+++++++.+.++.++++
T Consensus 214 e~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 293 (422)
T 3fvs_A 214 EVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFE 293 (422)
T ss_dssp CTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred ccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHh
Confidence 99999988887677777776656899999999999998999999999999999998887776677899999999999987
Q ss_pred c-----cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcc--cCCCCCCChHHHHHHHH
Q 018665 230 L-----GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA--EGFGKIENSESLCRYLL 302 (352)
Q Consensus 230 ~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~ 302 (352)
. .. ..+++++++++++++++.+.+.|+++ |+.+..+.+++++|++++....... .+........++++.++
T Consensus 294 ~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 371 (422)
T 3fvs_A 294 REQLLFRQ-PSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMI 371 (422)
T ss_dssp HHHHTTTC-TTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHH
T ss_pred hccccccc-hHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHH
Confidence 4 11 25778899999999999999999998 8998889999999998865210000 00000000568888888
Q ss_pred HccCEEeccCCCCCC-------CCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 303 DKAQVALVPGDAFGD-------DTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 303 ~~~gi~i~~g~~~~~-------~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+++||.+.||+.|+. .+++|++++.+++++++++++|++++++
T Consensus 372 ~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 372 KNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred HhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 777999999998853 6899999999999999999999999875
No 4
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=2.9e-45 Score=334.62 Aligned_cols=324 Identities=40% Similarity=0.651 Sum_probs=283.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQ-ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~-i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..|..++| +.+++++. .+|+++++++ |++++|+++++..++.+++++||+|+++.|+|+++...++..
T Consensus 58 ~y~~~~g~~~l~------~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~ 131 (389)
T 1gd9_A 58 HYGPNIGLLELR------EAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILA 131 (389)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHH
T ss_pred CCCCCCCcHHHH------HHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHC
Confidence 577777899999 99999998 6787778889 999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.+.++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++.
T Consensus 132 g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~ 210 (389)
T 1gd9_A 132 GGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEH-DLIVISDEVYEHFIYDDA 210 (389)
T ss_dssp TCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCTTC
T ss_pred CCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEehhhhhcccCCC
Confidence 9999999987544577899999999988899999999999999999999999999999999 999999999999887665
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChH--HH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGE--VV 238 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~ 238 (352)
...++..+....++++++.|+||.+|++|+|+||+++++++++.+.......+++++++.+.++.++++.. .. ++
T Consensus 211 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~ 287 (389)
T 1gd9_A 211 RHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDE---RSWKAV 287 (389)
T ss_dssp CCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCH---HHHHHH
T ss_pred CCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---CcchHH
Confidence 44556555433578899999999999899999999999999999888776667789999999999999852 33 78
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC-
Q 018665 239 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD- 317 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~- 317 (352)
++.+++++++++.+.+.|+++ |+++..+.+++++|++++... .+..++.+.|.+++||.+.||..|+.
T Consensus 288 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~ 356 (389)
T 1gd9_A 288 EEMRKEYDRRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIRDTG----------LTSKKFSELMLKEARVAVVPGSAFGKA 356 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCCCCCCBTTEECCBCGGGT----------CCHHHHHHHHHHHTCEECEEGGGGCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEeccCCC----------CCHHHHHHHHHHhCCEEEeCchhhCCC
Confidence 888999999999999999988 888888888998999887410 16788999988556999999987763
Q ss_pred -CCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 318 -DTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 318 -~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
++++|++++.+++++++++++|++++++.+
T Consensus 357 ~~~~iRi~~~~~~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 357 GEGYVRISYATAYEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp GTTBEEEECCSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 679999999999999999999999997654
No 5
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2e-45 Score=339.51 Aligned_cols=328 Identities=23% Similarity=0.360 Sum_probs=286.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++.|..++| +.+++++++.+.++++++|++|+|+++++..++.++.++||+|+++.|+|.++...++..|.
T Consensus 91 ~y~~~~g~~~lr------~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~ 164 (427)
T 3dyd_A 91 GYAPSIGFLSSR------EEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGI 164 (427)
T ss_dssp SCCCTTCCHHHH------HHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTC
T ss_pred CCCCCCCcHHHH------HHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCC
Confidence 588889999999 99999998447778889999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++.+++.++.+|++++++.++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++...
T Consensus 165 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~~i~Deay~~~~~~g~~~ 243 (427)
T 3dyd_A 165 EVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQ-CVPILADEIYGDMVFSDCKY 243 (427)
T ss_dssp EEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCCEEEECTTTTCBCSSCCC
T ss_pred EEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEcCchhhccCCCcC
Confidence 99999998767788999999999998999999999999999999999999999999999 99999999999998877666
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcC-------hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCCh
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-------KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
.++..+.. ..++++++|+||.++++|+|+||++++ +++++.+...... +++++++.+.++.++++.. ..
T Consensus 244 ~~~~~~~~-~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~--~~ 319 (427)
T 3dyd_A 244 EPLATLST-DVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRT--PG 319 (427)
T ss_dssp CCGGGGCS-SCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHS--CH
T ss_pred ccHHHhCC-CCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhc--CH
Confidence 66666554 356899999999998899999999986 4677777665433 4679999999999999842 26
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
+++++.+++++++++.+.+.|+++|++.++.+++|+++|+.++...- .. ..+..+++++|++++||.+.||..|
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~--~~----~~~~~~~~~~l~~~~gV~v~~g~~~ 393 (427)
T 3dyd_A 320 EFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHF--PE----FENDVEFTERLVAEQSVHCLPATCF 393 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGC--TT----CSSHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhc--CC----CCCHHHHHHHHHHHCCEEEECCccc
Confidence 77889999999999999999999889998889999999988763100 00 0167789999876669999999999
Q ss_pred CCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 316 GDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 316 ~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.++++||+++.+++++++++++|++++++++
T Consensus 394 ~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 394 EYPNFIRVVITVPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp TCTTEEEEESCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence 88999999999899999999999999998765
No 6
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.3e-45 Score=337.19 Aligned_cols=325 Identities=23% Similarity=0.337 Sum_probs=288.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..|..+++ +.+++++. .+|.++++ ++|++++|+++++..++.+++++||+|+++.|+|.++...++..
T Consensus 73 ~y~~~~g~~~l~------~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~ 146 (407)
T 3nra_A 73 AYTEYRGDLGIR------DLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF 146 (407)
T ss_dssp HSCCTTCCHHHH------HHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHT
T ss_pred CcCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHHHc
Confidence 477888999999 99999998 77877766 79999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccC----CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 81 DATPVILPTRI----SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 81 g~~v~~i~~~~----~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
|.+++.++++. +.++.+|++.|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+.+.
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~Dea~~~~~ 225 (407)
T 3nra_A 147 EGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARY-GATVIADQLYSRLR 225 (407)
T ss_dssp TCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTSB
T ss_pred CCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHc-CCEEEEEccccccc
Confidence 99999999842 25667999999999988999999999999999999999999999999999 99999999999988
Q ss_pred cCCCCccccccCC-CCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCCh
Q 018665 157 YAPATHTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
+++....++..+. ..+++++++.|+||.+|++|+|+||+++++++++.+......++.+++++.+.++.++++. ..
T Consensus 226 ~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~ 302 (407)
T 3nra_A 226 YAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDE---AP 302 (407)
T ss_dssp CTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC---CT
T ss_pred cCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhc---cc
Confidence 8876666666664 4468899999999999999999999999999999998887777788889888888888875 35
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
+++++.+++++++++.+.+.|++++++.+..+.+++++|+.++... .+..++.+.|.+++||.+.+|..|
T Consensus 303 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~ 372 (407)
T 3nra_A 303 GWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLA----------VAPAEFVKILRLQAGVVVTPGTEF 372 (407)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBS----------SCHHHHHHHHHHHHCEECEEGGGT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCC----------CCHHHHHHHHHHhCCEEEeCchhh
Confidence 7788889999999999999999988999988888899999987621 178899999987679999999888
Q ss_pred C--CCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 316 G--DDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 316 ~--~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
+ .++++|++++.+++++++++++|++++++++
T Consensus 373 ~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 373 SPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp CTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 6 4689999999999999999999999998765
No 7
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.6e-45 Score=337.38 Aligned_cols=327 Identities=25% Similarity=0.411 Sum_probs=282.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..+..++| +.+++++. ++|.++++ ++|++++|+++++..++.+++++||+|+++.|+|.++...++..
T Consensus 70 ~y~~~~g~~~l~------~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~ 143 (412)
T 2x5d_A 70 GYSTSRGIPRLR------RAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIA 143 (412)
T ss_dssp ---CTTCCHHHH------HHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHH
T ss_pred CCCCCCCcHHHH------HHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc
Confidence 477788999999 99999998 77877777 79999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.+.++.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++.
T Consensus 144 g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~ 222 (412)
T 2x5d_A 144 GAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQY-DVMVVHDLAYADIVYDGW 222 (412)
T ss_dssp TCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTC
T ss_pred CCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCC
Confidence 9999999987544666899999999988899999999999999999999999999999999 999999999999888765
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...++..+....++++++.|+||.+|++|+|+||+++++++++.+.......+++++++.+.++.++++. ..+++++
T Consensus 223 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~ 299 (412)
T 2x5d_A 223 KAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG---DQQCVRD 299 (412)
T ss_dssp CCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS---CSHHHHH
T ss_pred CCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC---CHHHHHH
Confidence 5556666543357889999999999989999999999999999988776666678999999999999986 2577889
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
++++++++++.+.+.|+++ ++.+..+.+|+++|++++...+ ..+..++.+.|++++||.+.||..|.. +
T Consensus 300 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~ 370 (412)
T 2x5d_A 300 IARQYQQRRDVLVKGLREA-GWMVENPKASMYVWAKIPEPYA--------HLGSLEFAKKLLQDAKVSVSPGIGFGDYGD 370 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCCCCCSBSSEEEEECCTTTG--------GGCHHHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEecCCCeeeEEEEEcCCccC--------CCCHHHHHHHHHHHCCEEEeCchhhCCCCC
Confidence 9999999999999999988 8888888889899999874310 014678999987656999999988753 5
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+++||+++.+++++++++++|+++++++..
T Consensus 371 ~~iRis~~~~~~~l~~~l~~l~~~l~~~~~ 400 (412)
T 2x5d_A 371 DHVRFALIENRDRLRQAVRGIKAMFRADGL 400 (412)
T ss_dssp TEEEEECCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHHhcCC
Confidence 799999999999999999999999987654
No 8
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=5e-45 Score=337.29 Aligned_cols=334 Identities=24% Similarity=0.462 Sum_probs=283.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..|..+++ +.+++++. ++|.+++++ +|++++|+++++..++.+++++||+|+++.|+|+++...++..
T Consensus 72 ~y~~~~g~~~l~------~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~ 145 (429)
T 1yiz_A 72 QYTRGFGHPRLV------QALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAA 145 (429)
T ss_dssp SCCCSSCCHHHH------HHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT
T ss_pred CCCCCCCcHHHH------HHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc
Confidence 577777899999 99999998 678777888 9999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCC--------CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 81 DATPVILPTRISE--------NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 81 g~~v~~i~~~~~~--------~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
|.+++.++++.+. ++.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~ 224 (429)
T 1yiz_A 146 GGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW-NVLCVSDEVY 224 (429)
T ss_dssp TCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTT
T ss_pred CCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEeccc
Confidence 9999999987543 567899999999988999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcc--
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-- 230 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 230 (352)
+++.+++....++..+....++++++.|+||.+|++|+|+||+++++++++.+.......+++.+++.+.++.++++.
T Consensus 225 ~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~ 304 (429)
T 1yiz_A 225 EHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETEL 304 (429)
T ss_dssp TTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhccc
Confidence 998887765556655543467899999999999989999999999999999888776666778999999999999986
Q ss_pred ---cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCc-ccCCCCCCChHHHHHHHHHccC
Q 018665 231 ---GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGKIENSESLCRYLLDKAQ 306 (352)
Q Consensus 231 ---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~g 306 (352)
... .+++++.++.++++++.+.+.|+++ ++.+..+.+|+++|+++++..... .....+..+..++.++|++++|
T Consensus 305 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 382 (429)
T 1yiz_A 305 KRLKSP-ECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVG 382 (429)
T ss_dssp TTTTST-TSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTS
T ss_pred ccccch-HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCC
Confidence 322 5678899999999999999999988 888888888999999987531000 0000000146688888886569
Q ss_pred EEeccCCCCCC-------CCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 307 VALVPGDAFGD-------DTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 307 i~i~~g~~~~~-------~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
|.+.||..|+. ++++||+++.+++++++++++|++++++
T Consensus 383 v~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 383 LQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp EECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHHHHHSCC
T ss_pred EEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHHHHhccC
Confidence 99999987752 6799999999999999999999998754
No 9
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=2.2e-45 Score=337.00 Aligned_cols=320 Identities=23% Similarity=0.402 Sum_probs=281.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..+..++| +.+++++. ++|.++++ ++|++++|+++++..++.+++++||+|+++.|+|.++...++..
T Consensus 80 ~y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~ 153 (404)
T 2o1b_A 80 KYGAFHGKEAFK------QAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLA 153 (404)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHT
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHC
Confidence 477778999999 99999998 66877776 79999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++. +++.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++
T Consensus 154 g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g- 230 (404)
T 2o1b_A 154 DGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGT-DTKIVHDFAYGAFGFDA- 230 (404)
T ss_dssp TCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTS-SCEEEEECTTTTCBSSS-
T ss_pred CCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCC-
Confidence 99999999875 4566899999998877889999999999999999999999999999999 99999999999987765
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...++..+...+++++++.|+||.+|++|+|+||+++++++++.+......++++++.+.+.++.++++. ..+++++
T Consensus 231 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~ 307 (404)
T 2o1b_A 231 KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNH---YDDFLEE 307 (404)
T ss_dssp CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH---CHHHHHH
T ss_pred CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc---CHHHHHH
Confidence 3345555433346889999999999889999999999999999988877666678999999999999986 2678889
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
.++.++++++.+.+.|+++ ++.+..+.+|+++|++++... +..++.+.|++++||.+.||..|+. +
T Consensus 308 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~~gi~v~~g~~f~~~~~ 375 (404)
T 2o1b_A 308 QSNVFKTRRDRFEAMLAKA-DLPFVHAKGGIYVWLETPPGY-----------DSEQFEQFLVQEKSILVAPGKPFGENGN 375 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCEECCCBSSEEEEECCTTC-----------CHHHHHHHHHHHHCEECEESGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHhc-CCeecCCCcceEEEEeCCCCC-----------CHHHHHHHHHHHCCEEEeCchhhCcCCC
Confidence 9999999999999999988 888888888999999987532 6788999988656999999988764 6
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
+++||+++.+++++++++++|+++++++
T Consensus 376 ~~iRis~~~~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 376 RYVRISLALDDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp TEEEEECCSCTTHHHHHHHHHHGGGGGG
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Confidence 8999999998899999999999998764
No 10
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=3.9e-45 Score=334.00 Aligned_cols=319 Identities=26% Similarity=0.432 Sum_probs=276.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..|..++| +.++++++ ++|+++++++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|
T Consensus 63 ~y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g 136 (391)
T 3h14_A 63 GYTVALGLPALR------QRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALG 136 (391)
T ss_dssp ------CCHHHH------HHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTT
T ss_pred CCCCCCChHHHH------HHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcC
Confidence 577788899999 99999999 88988899999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++.++++.+|+++|++. ++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++.
T Consensus 137 ~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~- 211 (391)
T 3h14_A 137 LVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQ-GASFISDEIYHGIEYEAK- 211 (391)
T ss_dssp CEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBSSSC-
T ss_pred CEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEECcchhcccCCC-
Confidence 999999998766778899999887 789999999999999999999999999999999 999999999999887664
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..+.... .+++++++|+||.+|++|+|+||+++++++++.+......++.+++.+.+.++.++++. .+++++.
T Consensus 212 ~~~~~~~---~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~ 284 (391)
T 3h14_A 212 AVTALEL---TDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDC----DAELQAN 284 (391)
T ss_dssp CCCGGGT---CSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTC----HHHHHHH
T ss_pred CcChhhc---CCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCC----hHHHHHH
Confidence 2333332 46889999999999989999999999999999998887777888999999999888873 7889999
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC---C
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---D 318 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~---~ 318 (352)
+++++++++.+.+.|++++...+..+.+++++|++++... .+..++.+.|++++||.+.||..|+. +
T Consensus 285 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 354 (391)
T 3h14_A 285 LDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLT----------DDSRAFAAEILEKAGVAVTPGLDFDPERGA 354 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTC----------SCHHHHHHHHHHHHCEECEEGGGTCTTTGG
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccC----------CCHHHHHHHHHHHCCEEEcCchhhCCCCCC
Confidence 9999999999999999884444457788899999987521 17889999988777999999998876 5
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHhhhCCC
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
+++|++++.+++++++++++|++++++....
T Consensus 355 ~~iRis~~~~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 355 GTLRFSYARATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp GEEEEECCSCHHHHHHHHHHHHHHHHHC---
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHHHhccc
Confidence 7999999999999999999999999876554
No 11
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-45 Score=343.24 Aligned_cols=329 Identities=24% Similarity=0.447 Sum_probs=280.2
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|++..|..++| +.+++++. .+|..+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..
T Consensus 89 ~~Y~~~~g~~~lr------~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~ 162 (447)
T 3b46_A 89 NQYSPTRGRPSLI------NSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELC 162 (447)
T ss_dssp GSCCCTTCCHHHH------HHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHc
Confidence 4688888999999 99999998 6787778889999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCC----------CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 81 DATPVILPTRISE----------NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 81 g~~v~~i~~~~~~----------~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
|.+++.++++.+. ++.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+++ |+++|+||
T Consensus 163 g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-~~~li~De 241 (447)
T 3b46_A 163 GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKH-NVVIISDE 241 (447)
T ss_dssp TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CcEEEEec
Confidence 9999999987542 577999999999988999999999999999999999999999999999 99999999
Q ss_pred cccccccCCCCccccccC-CCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHh
Q 018665 151 IYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAAL 228 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 228 (352)
+|+++.+++ ...++..+ ...+++++++.|+||.+|++|+|+||+++ ++++++.+.......+++++++.+.++.+++
T Consensus 242 ~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL 320 (447)
T 3b46_A 242 VYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSI 320 (447)
T ss_dssp TTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred cchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHH
Confidence 999988876 33455444 22257889999999999989999999999 9999998887666666788999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCC------CCCCChHHHHHHHH
Q 018665 229 GLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGF------GKIENSESLCRYLL 302 (352)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~ 302 (352)
+.... .++++++++.++++++.+.+.|+++ |+.+..+.+|+++|++++.... ..++ ....+..+++++|.
T Consensus 321 ~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~l~ 396 (447)
T 3b46_A 321 NDALK-IGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTYFVLVDFSKVKI--PEDYPYPEEILNKGKDFRISHWLI 396 (447)
T ss_dssp HHHHH-HTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECTTCCC--CTTCCCCGGGSSSCHHHHHHHHHH
T ss_pred hCCcc-hHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecccccC--ccccccccccccCCCHHHHHHHHH
Confidence 86211 4668889999999999999999988 8888888899999999875200 0000 00014668888888
Q ss_pred HccCEEeccCCCCCC-------CCeEEEEeecCHHHHHHHHHHHHHH
Q 018665 303 DKAQVALVPGDAFGD-------DTCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 303 ~~~gi~i~~g~~~~~-------~~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
+++||.+.||+.|+. ++++|++++.+++++++++++|++.
T Consensus 397 ~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 397 NELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLL 443 (447)
T ss_dssp HHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred HhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence 667999999987753 5799999999999999999999873
No 12
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=3.9e-45 Score=339.16 Aligned_cols=319 Identities=19% Similarity=0.374 Sum_probs=280.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|+++.|..++| +.+++++. ++|.+ ++++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|
T Consensus 113 ~Y~~~~g~~~lr------~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g 185 (448)
T 3aow_A 113 QYGTTKGFTPLR------ETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYE 185 (448)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTC
T ss_pred CCCCCCCcHHHH------HHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcC
Confidence 588888999999 99999996 77876 78999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhcc----C--CeeEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLT----E--KSRLL-ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~----~--~~~~i-~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
.+++.++++.+ ++|+++|+++++ + ++++| ++++|+||||.++|.+++++|+++|+++ |+++|+||+|++
T Consensus 186 ~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~-~~~lI~De~y~~ 261 (448)
T 3aow_A 186 PQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEY-DFIVVEDDPYGE 261 (448)
T ss_dssp CEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECSCTT
T ss_pred CEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHc-CCEEEEECCCcc
Confidence 99999998742 389999999987 5 78887 4689999999999999999999999999 999999999999
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCC
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
+.+++....++..+.. .++++++.|+||.++ +|+|+||+++++++++.+......++.++|++.|.++.++++....
T Consensus 262 ~~~~g~~~~~~~~~~~-~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~- 338 (448)
T 3aow_A 262 LRYSGNPEKKIKALDN-EGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYL- 338 (448)
T ss_dssp CBCSSCCCCCTGGGCT-TSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHH-
T ss_pred ccCCCCCCcCHHhcCC-CCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCH-
Confidence 9887765566666643 478999999999999 9999999999999999988776666677899999999999986311
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcc-cC-CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGE-LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~-~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
.++++++++.++++++.+.+.|++ +| ++.+..|.+|+++|+++++.. +..++.+.|.++ ||.+.||
T Consensus 339 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~-----------~~~~l~~~l~~~-gV~v~pg 406 (448)
T 3aow_A 339 EKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGI-----------DSKKMLERAIKK-GVAYVPG 406 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTC-----------CHHHHHHHHHHT-TEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCC-----------CHHHHHHHHHHC-CcEEEcc
Confidence 567888899999999999999987 46 688888889999999998642 788899999987 9999999
Q ss_pred CCCC----CCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 313 DAFG----DDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 313 ~~~~----~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
..|+ .++++||+++. +++++++++++|+++++++.
T Consensus 407 ~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~~ 446 (448)
T 3aow_A 407 EAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEEL 446 (448)
T ss_dssp GGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8874 35799999998 78999999999999997653
No 13
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=5e-45 Score=332.71 Aligned_cols=319 Identities=27% Similarity=0.474 Sum_probs=278.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|++..|..++| +.+++++. .+|.+++++ +|++++|+++++..++.+++++||+|+++.|+|+++...++.
T Consensus 61 ~~y~~~~g~~~l~------~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~ 134 (386)
T 1u08_A 61 NQYAPMTGVQALR------EAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIAL 134 (386)
T ss_dssp CSCCCTTCCHHHH------HHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH
T ss_pred cCCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHH
Confidence 4577778899999 99999998 678777888 999999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.|.+++.++++.+ ++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++
T Consensus 135 ~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g 212 (386)
T 1u08_A 135 SGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGH-EIFVISDEVYEHINFSQ 212 (386)
T ss_dssp TTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTS-CCEEEEECTTTTCBCCS
T ss_pred cCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEEccccccccCC
Confidence 9999999998643 567999999999988999999999999999999999999999999999 99999999999988876
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++..+....++++++.|+||.+|++|+|+||+++++++++.+.......+++++++.+.++.++++.. .++++
T Consensus 213 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~ 289 (386)
T 1u08_A 213 QGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE---PEHYL 289 (386)
T ss_dssp SCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC---THHHH
T ss_pred CCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC---cHHHH
Confidence 545555544322478899999999999899999999999999998887766556778999999999999862 57788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--- 316 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~--- 316 (352)
+++++++++++.+.+.|+++ |+.+..+.+|+++|+++++... .+..++.+.|.+++||.+.||..|.
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~l~~~~gi~v~~g~~f~~~~ 359 (386)
T 1u08_A 290 ALPDFYRQKRDILVNALNES-RLEILPCEGTYFLLVDYSAVST---------LDDVEFCQWLTQEHGVAAIPLSVFCADP 359 (386)
T ss_dssp THHHHHHHHHHHHHHHTTSS-SCEECCCCBSSEEEEECTTTCC---------SCHHHHHHHHHHHSCEECEEGGGGCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeecCCCceEEEEEecCCCCC---------CCHHHHHHHHHHhCCEEEeCchHhCCCC
Confidence 99999999999999999998 8888888888999999875300 1678898988866699999998774
Q ss_pred -CCCeEEEEeecCHHHHHHHHHHHHH
Q 018665 317 -DDTCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 317 -~~~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
.++++|++++.+++++++++++|++
T Consensus 360 ~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 360 FPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp CCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred CCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 3579999999999999999999864
No 14
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.6e-45 Score=335.69 Aligned_cols=327 Identities=30% Similarity=0.509 Sum_probs=281.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|++..|..++| +.+++++. .+|.+++++ +|++++|+++++..++.+++++||+|+++.|+|.++...++.
T Consensus 56 ~~y~~~~g~~~l~------~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~ 129 (411)
T 2o0r_A 56 NQYPPGPGSAPLR------RAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAM 129 (411)
T ss_dssp CSCCCTTCCHHHH------HHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHH
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHH
Confidence 4677788899999 99999998 778877887 999999999999999999999999999999999999999999
Q ss_pred cCCeEEEecccCC-CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 80 ADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 80 ~g~~v~~i~~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
.|.+++.++++.+ .++.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.++
T Consensus 130 ~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~ 208 (411)
T 2o0r_A 130 AGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAA-NLVVITDEVYEHLVFD 208 (411)
T ss_dssp TTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCT
T ss_pred cCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEccccccccC
Confidence 9999999998753 3466899999999988999999999999999999999999999999999 9999999999998887
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
+....++..+....++++++.|+||.+|++|+|+||+++++++++.+.......+++.+++.+.++.++++. ..+++
T Consensus 209 g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~ 285 (411)
T 2o0r_A 209 HARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDT---EDAWV 285 (411)
T ss_dssp TCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHH---CHHHH
T ss_pred CCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC---ChHHH
Confidence 655556665544357899999999999989999999999999999888766655667888899999999875 26778
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC--
Q 018665 239 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-- 316 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-- 316 (352)
++++++++++++.+.+.|++. |+.+..+.+|+++|+++++..+ .+..++.++|++++||.+.||..|.
T Consensus 286 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~l~~~~gi~v~~g~~f~~~ 355 (411)
T 2o0r_A 286 AALRNSLRARRDRLAAGLTEI-GFAVHDSYGTYFLCADPRPLGY---------DDSTEFCAALPEKVGVAAIPMSAFCDP 355 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCEECCCCBSSEEEEECGGGTC---------CCHHHHHHHHHHHHSEECEEGGGGSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCEecCCCeeEEEEEecCCCCC---------CCHHHHHHHHHHhCCEEEcChhhhCCC
Confidence 899999999999999999988 8888888889899999875200 1678899988865699999998773
Q ss_pred -----------CCCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 317 -----------DDTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 317 -----------~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.++++||+++.+++++++++++|++++++.+.
T Consensus 356 ~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~~~~ 398 (411)
T 2o0r_A 356 AAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERPAT 398 (411)
T ss_dssp C--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC----
T ss_pred ccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhccCc
Confidence 24689999988999999999999998877655
No 15
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=8.5e-45 Score=331.48 Aligned_cols=315 Identities=36% Similarity=0.649 Sum_probs=277.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..+..++| +.++++++ ++|+++++++|++++|+++++..++.+++++||+|+++.|+|.++...++..|
T Consensus 73 ~y~~~~g~~~lr------~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g 146 (389)
T 1o4s_A 73 KYTDPRGIYELR------EGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAG 146 (389)
T ss_dssp CCCCTTCCHHHH------HHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTT
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcC
Confidence 577778899999 99999998 67887788999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++.+.++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++ .
T Consensus 147 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~g-~ 224 (389)
T 1o4s_A 147 GTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKR-NFYIISDEVYDSLVYTD-E 224 (389)
T ss_dssp CEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTSBCSS-C
T ss_pred CEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEccccccccCC-C
Confidence 999999987544677899999999988899999999999999999999999999999999 99999999999987765 2
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
..++..+....++++++.|+||.+|++|+|+||+++++++++.+......++++++++.+.++.++++.+ ++++
T Consensus 225 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~ 298 (389)
T 1o4s_A 225 FTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYM 298 (389)
T ss_dssp CCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHH
T ss_pred CCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHH
Confidence 3445444333578899999999999899999999999999998887766666778999999998888752 6777
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
+++++++++.+.+.|+++ |+.+..+.+++++|++++ . +..++.+.|+++.||.+.||..|+.++++
T Consensus 299 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~------------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~ 364 (389)
T 1o4s_A 299 VQTFKERKNFVVERLKKM-GVKFVEPEGAFYLFFKVR-G------------DDVKFCERLLEEKKVALVPGSAFLKPGFV 364 (389)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCCCCCSBSSEEEEECS-S------------CHHHHHHHHHHHHCEECEEGGGGTCTTEE
T ss_pred HHHHHHHHHHHHHHHHhc-CCeeecCCcceEEEEeCC-C------------CHHHHHHHHHHHCCEEEeCchhcCCCCeE
Confidence 888899999999999988 888888888999999887 2 78889999884559999999888777899
Q ss_pred EEEeecCHHHHHHHHHHHHHHHhh
Q 018665 322 RISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
|++++.+++++++++++|++++++
T Consensus 365 Ris~~~~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 365 RLSFATSIERLTEALDRIEDFLNS 388 (389)
T ss_dssp EEECCSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998753
No 16
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=9.9e-45 Score=331.81 Aligned_cols=316 Identities=21% Similarity=0.338 Sum_probs=277.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCC-CCCC-cEEEeCChHHHHHHHHHHhcCCC-----CEEEecCCCCCCh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLS-YTPD-QILVSNGAKQSILQAVLAVCSPG-----DEVIIPAPFWVSY 73 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~-~~~~-~i~~~~g~~~a~~~~~~~l~~~~-----~~vl~~~~~~~~~ 73 (352)
..|++..|..++| +.+++++. ++|++ ++++ +|++|+|+++++..++.+++++| |+|+++.|+|.++
T Consensus 60 ~~y~~~~g~~~lr------~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~ 133 (396)
T 3jtx_A 60 EKYPLTAGLPELR------QACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIY 133 (396)
T ss_dssp GSCCCTTCCHHHH------HHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHH
T ss_pred cCCCCCCCcHHHH------HHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhH
Confidence 4688888899999 99999998 78877 7788 99999999999999999999886 7999999999999
Q ss_pred HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 74 PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
...++..|.+++.++++ ++++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+
T Consensus 134 ~~~~~~~g~~~~~v~~~-~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~ 211 (396)
T 3jtx_A 134 EGATLLGGGEIHFANCP-APSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKY-GFIIASDECYS 211 (396)
T ss_dssp HHHHHHTTCEEEEEECC-TTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-CCEEEEECTTT
T ss_pred HHHHHHcCCEEEEeecC-CCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEEcccc
Confidence 99999999999999994 45677899999999988999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCCcccccc----CCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhc
Q 018665 154 HIIYAPATHTSFAS----LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALG 229 (352)
Q Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 229 (352)
++.+++..+.+... +...+++++++.|+||.++++|+|+||+++++++++.+.......+++++++.+.++.++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 291 (396)
T 3jtx_A 212 EIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWD 291 (396)
T ss_dssp TCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred ccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhC
Confidence 98877643333221 12235788999999999988999999999999999999887777778899999999999998
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
. .+++++.++.++++++.+.+.|+++ +.+..+.+|+++|++++.. +..++.+.|++++||.+
T Consensus 292 ~----~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~gi~v 353 (396)
T 3jtx_A 292 D----EQHVIDNRRLYQEKFERVIPILQQV--FDVKLPDASFYIWLKVPDG------------DDLAFARNLWQKAAIQV 353 (396)
T ss_dssp C----CHHHHHHHHHHHHHHHHHHHHHTTT--SCCCCCSSSSEEEEECTTS------------CHHHHHHHHHHHHCEEC
T ss_pred C----HHHHHHHHHHHHHHHHHHHHHHHhc--CCccCCCeeEEEEEECCCC------------CHHHHHHHHHHHCCEEE
Confidence 5 6788999999999999999999875 4566788899999999863 78899999977679999
Q ss_pred ccCCCCCC--------CCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 310 VPGDAFGD--------DTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 310 ~~g~~~~~--------~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
.||..|+. ++++||+++.+++++++++++|++++
T Consensus 354 ~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 354 LPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp EEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred eCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 99988764 47999999999999999999999875
No 17
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=1.4e-44 Score=332.31 Aligned_cols=330 Identities=30% Similarity=0.531 Sum_probs=284.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..|..++| +.++++++ .+++++++ ++|++++|+++++..++.+++++||+|+++.|+|..+...++..
T Consensus 56 ~y~~~~g~~~l~------~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~ 129 (410)
T 3e2y_A 56 QYTRGFGHPALV------KALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMA 129 (410)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT
T ss_pred CCCCCCChHHHH------HHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc
Confidence 577788899999 99999999 88888888 89999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccC---------CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 81 DATPVILPTRI---------SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 81 g~~v~~i~~~~---------~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
|.+++.++++. +.++.+|++++++++++++++|++++|+||||.+++.+++++|+++|+++ |+++|+||+
T Consensus 130 g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~ 208 (410)
T 3e2y_A 130 GAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKH-DTLCISDEV 208 (410)
T ss_dssp TCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECT
T ss_pred CCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEEhh
Confidence 99999999863 24566899999999998999999999999999999999999999999999 999999999
Q ss_pred ccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcc-
Q 018665 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL- 230 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 230 (352)
|+++.+++....++..+...+++++++.|+||.+|++|+|+||+++++++++.+.......+++++++.+.++.++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 288 (410)
T 3e2y_A 209 YEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWID 288 (410)
T ss_dssp TTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Confidence 9999888776667777766678999999999999999999999999999999998877766778999999999999873
Q ss_pred ----cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccC
Q 018665 231 ----GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 306 (352)
Q Consensus 231 ----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 306 (352)
.. ...+++++++.++++++.+.+.|+++ |+.+..+.+++++|++++..............+..++++++++++|
T Consensus 289 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 366 (410)
T 3e2y_A 289 IKRMDD-PECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKK 366 (410)
T ss_dssp HTTTTS-TTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHS
T ss_pred hccccc-hHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcC
Confidence 11 25778899999999999999999998 9998889999999998865321000000000023478887776779
Q ss_pred EEeccCCCCCC-------CCeEEEEeecCHHHHHHHHHHHHH
Q 018665 307 VALVPGDAFGD-------DTCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 307 i~i~~g~~~~~-------~~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
|.+.||+.|+. .+++||+++.+++++++++++|++
T Consensus 367 v~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 367 LTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp EECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred EEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHh
Confidence 99999998863 479999999999999999999975
No 18
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=8.8e-45 Score=329.91 Aligned_cols=314 Identities=25% Similarity=0.413 Sum_probs=274.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..+..++| +.+++++. ++|.+++++ +|++++|+++++..++.++.++||+|+++.|+|.++...++..
T Consensus 58 ~y~~~~~~~~l~------~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~ 131 (376)
T 2dou_A 58 GYCLKSCTLPFL------EEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVA 131 (376)
T ss_dssp SCCCHHHHHHHH------HHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHT
T ss_pred CCCCCCCCHHHH------HHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHc
Confidence 465556788999 99999998 668777776 9999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.+++ ++++.+|+++++++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++.
T Consensus 132 g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~ 208 (376)
T 2dou_A 132 SLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKH-GLWLIHDNPYVDQVYEGE 208 (376)
T ss_dssp TCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTGGGBSSSC
T ss_pred CCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCC
Confidence 999999998 35667899999998887899999999999999999999999999999999 999999999999887652
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
..++.......++++++.|+||.+|++|+|+||+++++++++.+......++.+++++.+.++.++++. ..+++++
T Consensus 209 -~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~ 284 (376)
T 2dou_A 209 -APSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKT---PKEVVRG 284 (376)
T ss_dssp -CCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTS---CHHHHHH
T ss_pred -CCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhC---cHHHHHH
Confidence 334444433357889999999999889999999999999999998877666777899999999999976 2678889
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
.++.++++++.+.+.|+++ +.+..+.+|+++|+++++.. +..++.+.|.++ ||.+.||..|+. +
T Consensus 285 ~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~-gi~v~~g~~f~~~~~ 350 (376)
T 2dou_A 285 YARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEGV-----------DDLEFGLRLVER-GVALAPGRGFGPGGK 350 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTTC-----------CHHHHHHHHHHT-TEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCCC-----------CHHHHHHHHHHC-CEEEcCchhhCCCCC
Confidence 9999999999999999986 77777788999999987532 678899999987 999999988763 6
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
+++||+++.+++++++++++|++++
T Consensus 351 ~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 351 GFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp TEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHh
Confidence 8999999989999999999998875
No 19
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2.4e-44 Score=332.19 Aligned_cols=319 Identities=18% Similarity=0.271 Sum_probs=274.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCC-------CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYT-------PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP 74 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~-------~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~ 74 (352)
.|++..|.+++| +.+++++. .+|.+.. +++|++|+|+++++..++.+++++||+|+++.|+|.++.
T Consensus 73 ~Y~~~~G~~~lr------~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~ 146 (425)
T 2r2n_A 73 QYSPSAGIPELL------SWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL 146 (425)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH
T ss_pred CCCCCCCCHHHH------HHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH
Confidence 589999999999 99999998 7787763 379999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc------------CCeeEEEE-cCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLT------------EKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------------~~~~~i~i-~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
..++..|.+++.++++.+ ++|+++|+++++ ++++++++ ++||||||.++|.+++++|+++|+++
T Consensus 147 ~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~ 223 (425)
T 2r2n_A 147 QSLHPLGCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY 223 (425)
T ss_dssp HHHGGGTCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc
Confidence 999999999999998642 489999999886 35788766 68999999999999999999999999
Q ss_pred CCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHH
Q 018665 142 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQ 221 (352)
Q Consensus 142 ~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
|+++|+||+|+++.+++....++..+.. .+++++++|+||.++ +|+|+||+++++++++.+.......+++++++.|
T Consensus 224 -~~~li~De~~~~~~~~g~~~~~~~~~~~-~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q 300 (425)
T 2r2n_A 224 -DFLIIEDDPYYFLQFNKFRVPTFLSMDV-DGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQ 300 (425)
T ss_dssp -TCEEEEECTTGGGBSSSSCCCCTGGGCT-TSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHH
T ss_pred -CCEEEEECCcccccCCCCCCCCccccCC-CCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHH
Confidence 9999999999998887766667666653 578999999999999 9999999999999999998877766778999999
Q ss_pred HHHHHHhcc---cCCChHHHHHHHHHHHHHHHHHHHHhcc-cCCc-eecCCCCceEEEeecCCccCCcccCCCCCCChHH
Q 018665 222 KAGVAALGL---GYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 222 ~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
.++.++++. +.. .++++++++.++++++.+.+.|++ ++++ .+..+.+|+++|+++++.. +..+
T Consensus 301 ~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~-----------~~~~ 368 (425)
T 2r2n_A 301 LMISQLLHEWGEEGF-MAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN-----------DVKE 368 (425)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS-----------CCHH
T ss_pred HHHHHHHHhcccchH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC-----------CHHH
Confidence 999999874 111 356788888999999999999987 4776 5667889999999998642 4555
Q ss_pred -HHHHHHHccCEEeccCCCCCC-----CCeEEEEee-cCHHHHHHHHHHHHHHHhhh
Q 018665 297 -LCRYLLDKAQVALVPGDAFGD-----DTCIRISYA-ASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 297 -~~~~l~~~~gi~i~~g~~~~~-----~~~iRi~~~-~~~~~l~~~~~~l~~~~~~~ 346 (352)
+.+.|.+ .||.+.||..|+. .+++||+++ .+++++++++++|++++++.
T Consensus 369 ~~~~~l~~-~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 369 LIEEKAVK-MGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp HHHTHHHH-TTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 4666665 5999999988863 479999998 49999999999999998753
No 20
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=6.2e-45 Score=330.96 Aligned_cols=316 Identities=21% Similarity=0.337 Sum_probs=279.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++ .+ .++| +.++++++ ++++++++++|++|+|+++++..++.++.++||+|+++.|+|.++...++..|
T Consensus 55 ~y~~-~~-~~lr------~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g 126 (377)
T 3fdb_A 55 GYQP-DG-SLLS------QATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQ 126 (377)
T ss_dssp SSCC-SS-CCHH------HHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHT
T ss_pred CCCC-CC-HHHH------HHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcC
Confidence 4666 66 8899 99999999 88988889999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC-C
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP-A 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~-~ 160 (352)
.+++.++++.+ +|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++ .
T Consensus 127 ~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~ 201 (377)
T 3fdb_A 127 REGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRY-DARVLVDEIHAPLVFDGQH 201 (377)
T ss_dssp CCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHT-TCEEEEECTTGGGBSSSCC
T ss_pred CEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEcccchhhcCCCC
Confidence 99999998743 899999999988899999999999999999999999999999999 99999999999988877 5
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
...++..+.. .++++++.|+||.+|++|+|+||+++ ++++++.+.......+.+++++.+.++.++++. ..++++
T Consensus 202 ~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~ 277 (377)
T 3fdb_A 202 TVAAGVSDTA-ASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRY---GTDFLN 277 (377)
T ss_dssp CCGGGSCHHH-HHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHH---CHHHHH
T ss_pred CcccHHHccC-CCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhc---cHHHHH
Confidence 5555554433 57889999999999889999999886 788889888776666678999999999999986 367789
Q ss_pred HHHHHHHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC-
Q 018665 240 KMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~- 317 (352)
+.+++++++++.+.+.|++ +|++.+..+.+++++|++++... ...++.+.|++++||.+.||..|+.
T Consensus 278 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gi~v~~g~~~~~~ 346 (377)
T 3fdb_A 278 QEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTT-----------IEGSPSEFFIEKAKVAMNDGAWFGED 346 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSC-----------CCSCHHHHHHHHHCEECEEGGGGCGG
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccC-----------CCHHHHHHHHHhCCEEecCChhccCC
Confidence 9999999999999999998 78999999999999999987631 2356777888777999999988875
Q ss_pred -CCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 318 -DTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 318 -~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
++++|++++.+++++++++++|+++++++
T Consensus 347 ~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 347 GTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp GTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 68999999999999999999999998764
No 21
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=4.3e-44 Score=327.78 Aligned_cols=312 Identities=26% Similarity=0.454 Sum_probs=269.5
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++..|..++| +.+++++. .+|+++++++|++|+|+++++..++.+++++| |+|+++.|+|.++...++..
T Consensus 71 ~y~~~~g~~~lr------~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~ 144 (398)
T 3ele_A 71 GYTSAQGDVETR------AAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAA 144 (398)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHT
T ss_pred CcCCCCCcHHHH------HHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHc
Confidence 588889999999 99999999 88888899999999999999999999999999 99999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh------CCCEEEEecccccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK------HPRLLVLSDEIYEH 154 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~------~~~~~livD~~~~~ 154 (352)
|.+++.++++. +++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|++ + |+++|+||+|++
T Consensus 145 g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~De~~~~ 222 (398)
T 3ele_A 145 GARLVEVPADT-EHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGR-PIFIIADEPYRE 222 (398)
T ss_dssp TCEEEEECCCT-TTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTS-CCEEEEECTTTT
T ss_pred CCEEEEEecCC-cCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCC-CeEEEEeccccc
Confidence 99999999874 367899999999999899999999999999999999999999999999 9 999999999999
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHH------HHHHhhhhc-cccCCChHHHHHHHHH
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV------AACNKIQSQ-FTSGASSISQKAGVAA 227 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~ 227 (352)
+.+++...+.... ..++++++.|+||.+|++|+|+||++++++++ +.+...... ...+++.+.+.++..+
T Consensus 223 ~~~~~~~~~~~~~---~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 299 (398)
T 3ele_A 223 IVYDGIKVPFVTK---YYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKC 299 (398)
T ss_dssp CBCTTCCCCCGGG---TCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTC
T ss_pred cccCCCCcCChHh---hcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHH
Confidence 8887643333322 24688999999999999999999999988743 333333222 2456777888888877
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
++.. . .++.++++++++.+.|+++ ++.+..+.+++++|+++++. +..++.+.|.+ .||
T Consensus 300 l~~~----~----~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~-~gi 357 (398)
T 3ele_A 300 QGAT----G----DINAYKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKALED------------DSNAFCEKAKE-EDV 357 (398)
T ss_dssp TTCC----C----CHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECSSS------------CHHHHHHHHHT-TTE
T ss_pred hcCH----H----HHHHHHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEcCCC------------CHHHHHHHHHH-CCE
Confidence 7652 1 3567788888999999888 88888899999999998764 67889888765 599
Q ss_pred EeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 308 ALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+.||..|+.++++||+++.+++++++++++|++++++++
T Consensus 358 ~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 358 LIVAADGFGCPGWVRISYCVDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp ECEESGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999988899999998899999999999999998765
No 22
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=3.3e-44 Score=328.68 Aligned_cols=325 Identities=23% Similarity=0.325 Sum_probs=278.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++. ..++| +.+++++. ++|+++++++|++|+|+++++..++.++.++||+|+++.|+|.++...++..|
T Consensus 63 ~y~~~--~~~l~------~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g 134 (399)
T 1c7n_A 63 GYTGP--TEEYK------KTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQE 134 (399)
T ss_dssp SSBCC--CHHHH------HHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTT
T ss_pred CCCCC--cHHHH------HHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcC
Confidence 45443 78899 99999998 67877788999999999999999999999999999999999999999999999
Q ss_pred CeEEEeccc-CCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 82 ATPVILPTR-ISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 82 ~~v~~i~~~-~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.+++.++++ .++++.+|+++|+++++ +++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++
T Consensus 135 ~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g 213 (399)
T 1c7n_A 135 RKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKS-DLMLWSDEIHFDLIMPG 213 (399)
T ss_dssp CEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHS-SCEEEEECTTTTCBCTT
T ss_pred CEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHc-CCEEEEEccccccccCC
Confidence 999999986 33346789999999997 6899999999999999999999999999999999 99999999999988876
Q ss_pred CCccccccCCCC-CCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhcccc-CCChHHHHHHHHHhcccCCChH
Q 018665 160 ATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 160 ~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
....++..+... .++++++.|+||.+|++|+|+||++++ +++++.+......++. +++++.+.++.++++. ..+
T Consensus 214 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~ 290 (399)
T 1c7n_A 214 YEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKE---CGK 290 (399)
T ss_dssp CCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH---CHH
T ss_pred CCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC---ChH
Confidence 545555554321 367899999999999899999999987 5788888876655543 6799999999888875 257
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
++++.++.++++++.+.+.|++ +|++.+..+.+++++|+++++.. .+..++.+.|.+++||.+.||..|
T Consensus 291 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~ 360 (399)
T 1c7n_A 291 WLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALK----------MDHKAMEEFMIHKAQIFFDEGYIF 360 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGC----------CCHHHHHHHHHHTTCCCCEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCC----------CCHHHHHHHHHHhCCEEEeCcccc
Confidence 7889999999999999999998 78998888888998899987520 167889999885569999999887
Q ss_pred C--CCCeEEEEeecCHHHHHHHHHHHHHHHhhhCCC
Q 018665 316 G--DDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 316 ~--~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
+ .++++||+++.+++++++++++|++++++++.+
T Consensus 361 ~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~~ 396 (399)
T 1c7n_A 361 GDGGIGFERINLAAPSSVIQESLERLNKALKDLKNR 396 (399)
T ss_dssp CGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHhc
Confidence 6 468999999998899999999999999887653
No 23
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.6e-44 Score=331.55 Aligned_cols=322 Identities=29% Similarity=0.512 Sum_probs=279.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..+..++| +.++++++ .+|+++++++|++++|+++++..++.+++++||+|+++.|+|.++...++..|
T Consensus 73 ~y~~~~g~~~l~------~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g 146 (406)
T 1xi9_A 73 YYGDSEGLPELR------KAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYG 146 (406)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTT
T ss_pred CCCCCCCcHHHH------HHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcC
Confidence 477778889999 99999999 78888888999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++.+.++.+|++.|++.+++++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++ .
T Consensus 147 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~-~~~li~De~~~~~~~~~-~ 224 (406)
T 1xi9_A 147 GKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEY-EIPVISDEIYDLMTYEG-E 224 (406)
T ss_dssp CEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBSSS-C
T ss_pred CEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEEcCccccccCC-C
Confidence 999999987545677899999999988899999999999999999999999999999999 99999999999987732 2
Q ss_pred ccccccCCCCCCc-eEEEeccccccccccceeEEEE--cCh----hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCC
Q 018665 162 HTSFASLPGMWER-TLTVNGFSKAFAMTGWRLGYIA--GPK----HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 162 ~~~~~~~~~~~~~-~i~~~s~sK~~g~~g~~~g~l~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
..++..+. .++ +++++|+||.+|++|+|+||++ +++ ++++.+....... ++++++.+.++.++++. .
T Consensus 225 ~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~---~ 298 (406)
T 1xi9_A 225 HISPGSLT--KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTG---P 298 (406)
T ss_dssp CCCHHHHC--SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHS---C
T ss_pred CCCHHHcC--CCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhC---C
Confidence 34455543 467 8999999999988999999999 999 9999888765544 67899999999999964 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~ 314 (352)
.++++++++.++++++.+.+.|+++|++.+..+.+++++|++++...+ .+..++.+.|.++.||.+.+|..
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~l~~~~gi~v~~g~~ 369 (406)
T 1xi9_A 299 MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPW---------KNDKEFVLDVLHNAHVLFVHGSG 369 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSC---------SSHHHHHHHHHHHHCEECEEGGG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCC---------CCHHHHHHHHHHhCCEEEeCchh
Confidence 456888899999999999999999888988888889989888864100 16788999888455999999988
Q ss_pred CCC--CCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 315 FGD--DTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 315 ~~~--~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
|+. ++++||+++.+++++++++++|+++++++.
T Consensus 370 f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 370 FGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp GCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 865 689999999899999999999999998753
No 24
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=6.2e-44 Score=325.87 Aligned_cols=318 Identities=19% Similarity=0.320 Sum_probs=280.7
Q ss_pred ChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 10 TLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
..+++ +.+++++. .+|+++++++|++++|+++++..++.++.++||+|+++.|+|.++...++..|.+++.++
T Consensus 64 ~~~l~------~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~ 137 (391)
T 3dzz_A 64 PAEYY------KAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSD 137 (391)
T ss_dssp CHHHH------HHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECC
T ss_pred CHHHH------HHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEee
Confidence 67888 99999999 888888899999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 89 TR-ISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 89 ~~-~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
++ .++++.+|+++|+++++ +++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+.+....++.
T Consensus 138 ~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~ 216 (391)
T 3dzz_A 138 LIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKH-QVLLISDEIHGDLVLTDEDITPAF 216 (391)
T ss_dssp CEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCSSCCCCCGG
T ss_pred eeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHC-CCEEEEecccccccCCCCCceehh
Confidence 86 34556789999999997 7899999999999999999999999999999999 999999999999888876666776
Q ss_pred cCCCC-CCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhh-ccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 167 SLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 167 ~~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
.+... .++++++.|+||.+|++|+|+||++++ +++++.+..... ...++++++.+.++.++++. ..+++++.++
T Consensus 217 ~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~ 293 (391)
T 3dzz_A 217 TVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEE---GHDWLRELKQ 293 (391)
T ss_dssp GSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH---CHHHHHHHHH
T ss_pred hcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc---cHHHHHHHHH
Confidence 66532 468899999999999899999999997 888888877643 33457899999999999886 3677899999
Q ss_pred HHHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCC--Ce
Q 018665 244 AFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD--TC 320 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~--~~ 320 (352)
+++++++.+.+.|++ +|++.+..+.+++++|++++... .+..++.+.|++++||.+.||..|+.. ++
T Consensus 294 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~ 363 (391)
T 3dzz_A 294 VLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALG----------MNAEDFCKYLREKTGLIISAGNGYRGNGHEF 363 (391)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGC----------SCHHHHHHHHHHHHCEECEESGGGCTTGGGE
T ss_pred HHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcC----------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCE
Confidence 999999999999998 78999999999999999987531 178899999974559999999888754 89
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 321 IRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
+|++++.+++++++++++|++++++++
T Consensus 364 iRis~~~~~~~i~~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 364 VRINLACPKELVIDGMQRLKQGVLNLN 390 (391)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999998764
No 25
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-44 Score=330.85 Aligned_cols=330 Identities=24% Similarity=0.376 Sum_probs=277.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-------hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-------ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP 74 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-------~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~ 74 (352)
..|++..+..++| +++|++++ ++|+++++++|++++|+++++..++.+++++||+|+++.|+|.++.
T Consensus 69 ~~y~~~~~~~~lr------~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~ 142 (416)
T 1bw0_A 69 NGYFPTVGSPEAR------EAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYE 142 (416)
T ss_dssp SSCCCTTCCHHHH------HHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH
T ss_pred CCcCCCCCCHHHH------HHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHH
Confidence 3577778999999 99999998 5677778899999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
..++..|.+++.++++.+.++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|++
T Consensus 143 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~ 221 (416)
T 1bw0_A 143 TVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEEL-RLPLFSDEIYAG 221 (416)
T ss_dssp HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCCEEEECTTTT
T ss_pred HHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CCEEEEEccccc
Confidence 9999999999999987554577899999999988899999999999999999999999999999999 999999999999
Q ss_pred cccCCC----CccccccCCCCCCceEEEeccccccccccceeEEEEcChh--HHHHHH----hhhhccccCCChHHHHHH
Q 018665 155 IIYAPA----THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACN----KIQSQFTSGASSISQKAG 224 (352)
Q Consensus 155 ~~~~~~----~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~ 224 (352)
+.+++. ...++..+.. .+++++++|+||.++++|+|+||++++++ +++.+. ... ..++++|++.+.++
T Consensus 222 ~~~~g~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~ 299 (416)
T 1bw0_A 222 MVFKGKDPNATFTSVADFET-TVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVG-MLVCGPCTVVQAAL 299 (416)
T ss_dssp CBCCSSCTTCCCCCTTSSCC-SCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHH-HHHTCSCHHHHHHH
T ss_pred cccCCCCCCCCccCHHHccC-CCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHh-ccccCCCcHHHHHH
Confidence 887765 3445554433 35689999999999889999999998663 444333 221 13457899999999
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
.++++.. ..+++++.+++++++++++.+.|+++|++.+..+.+|+++|++++... .. ...+..++.+.|+++
T Consensus 300 ~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~l~~~ 371 (416)
T 1bw0_A 300 GEALLNT--PQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEK---YR---DIKTDVEFFEKLLEE 371 (416)
T ss_dssp HHHHHSS--CHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGG---BS---SCCSHHHHHHHHHHH
T ss_pred HHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHH---cC---CCCCHHHHHHHHHHH
Confidence 9999742 267788999999999999999999988998887888988998876320 00 001677888888655
Q ss_pred cCEEeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 305 AQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 305 ~gi~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+||.+.||..|+.++++||+++.+++++++++++|++++++.+.
T Consensus 372 ~gi~v~~g~~f~~~~~iRis~~~~~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 372 ENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp HCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHHHBC
T ss_pred CCEEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhc
Confidence 69999999988878999999988999999999999999987654
No 26
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=5.4e-44 Score=325.39 Aligned_cols=314 Identities=23% Similarity=0.384 Sum_probs=277.0
Q ss_pred ChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 10 TLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
..+++ +.+++++. .+|.++++++|++++|+++++..++.+++++||+|+++.|+|.++...++..|.+++.++
T Consensus 61 ~~~~~------~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~ 134 (383)
T 3kax_A 61 PENIG------DIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSP 134 (383)
T ss_dssp CTTHH------HHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECC
T ss_pred CHHHH------HHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEecc
Confidence 67888 99999999 778888899999999999999999999999999999999999999999999999999999
Q ss_pred ccCC-CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccccc
Q 018665 89 TRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 167 (352)
Q Consensus 89 ~~~~-~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~ 167 (352)
++.+ +++.+|+++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++....++..
T Consensus 135 ~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~ 213 (383)
T 3kax_A 135 LQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKY-NVIVVADEIHSDIIYADHTHTPFAS 213 (383)
T ss_dssp CEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred ceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHC-CCEEEEEccccccccCCCCceeHhh
Confidence 8743 3467899999999988999999999999999999999999999999999 9999999999998887766666666
Q ss_pred CCCC-CCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccc-cCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 168 LPGM-WERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFT-SGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 168 ~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
+..+ .++++++.|+||.+|++|+|+||+++ ++++++.+......+. .+++++.+.++.++++. ..+++++++++
T Consensus 214 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~ 290 (383)
T 3kax_A 214 LSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE---CNDWLNEIRFY 290 (383)
T ss_dssp SCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT---CHHHHHHHHHH
T ss_pred cCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh---hHHHHHHHHHH
Confidence 5432 37889999999999999999999998 6888888877655443 47899999999999986 36778999999
Q ss_pred HHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CCeE
Q 018665 245 FRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCI 321 (352)
Q Consensus 245 ~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~~i 321 (352)
++++++.+.+.|++ +|++.+..+.+++++|++++... .+..++.+.|.+++||.+.||..|+. ++++
T Consensus 291 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~i 360 (383)
T 3kax_A 291 IEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALN----------LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHI 360 (383)
T ss_dssp HHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGC----------CCHHHHHHHHHHTSCEECEESGGGCTTCTTEE
T ss_pred HHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccC----------CCHHHHHHHHHhhCCEEeECchhhcCCCCCeE
Confidence 99999999999998 68999999999999999987531 17889999998667999999988875 4899
Q ss_pred EEEeecCHHHHHHHHHHHHHHH
Q 018665 322 RISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~ 343 (352)
|++++.+++++++++++|++++
T Consensus 361 Ri~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 361 GINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp EEECSSCHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999876
No 27
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=9e-45 Score=329.72 Aligned_cols=316 Identities=22% Similarity=0.335 Sum_probs=279.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++.|..++| +.+++++. .+++++|++++|+++++..++.+++++||+|+++.|+|.++...++..|.
T Consensus 58 ~y~~~~g~~~l~------~~la~~~~----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~ 127 (375)
T 3op7_A 58 NYGWIEGSPAFK------KSVSQLYT----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGA 127 (375)
T ss_dssp SSCCTTCCHHHH------HHHHTTSS----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHHTTC
T ss_pred CCCCCCChHHHH------HHHHHHhc----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCC
Confidence 588899999999 99999873 25678999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++.++++.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+.+ .
T Consensus 128 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~-~~~li~De~~~~~~~~~--~ 204 (375)
T 3op7_A 128 EVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEV-GAYILSDEVYRSFSELD--V 204 (375)
T ss_dssp EEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTT-TCEEEEECCSCCCSSSC--C
T ss_pred EEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEcccccccccC--C
Confidence 99999998666778999999999999999999999999999999999999999999999 99999999999876541 2
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.++.. .+++++++.|+||.+|++|+|+||+++++++++.+......++.+++++.+.++..+++. .+.++++.+
T Consensus 205 ~~~~~---~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~ 278 (375)
T 3op7_A 205 PSIIE---VYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAH---YQEILERNR 278 (375)
T ss_dssp CCHHH---HCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT---HHHHHHHHH
T ss_pred Cchhh---hcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc---cHHHHHHHH
Confidence 22222 246789999999999989999999999999999998887777788899999999888875 356788888
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEE
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 322 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iR 322 (352)
+.++++++.+.+.|++.+++.+..+.++++.|+.++... +..++++.|++++||.+.||..|+.++++|
T Consensus 279 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR 347 (375)
T 3op7_A 279 HILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM-----------PMEDFCLQLLQEHGVLLVPGNRFERDGYVR 347 (375)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS-----------CHHHHHHHHHHHHCEECEEGGGGTCTTEEE
T ss_pred HHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC-----------CHHHHHHHHHHhCCEEEeChhhhCCCCeEE
Confidence 899999999999999888899888888888888887542 678898988766699999999888889999
Q ss_pred EEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 323 ISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 323 i~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++++.+++++++++++|++++++++.
T Consensus 348 i~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 348 LGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999889999999999999988764
No 28
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-43 Score=323.91 Aligned_cols=321 Identities=16% Similarity=0.270 Sum_probs=273.6
Q ss_pred ccCCCCCChh-hhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQ-MRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~-l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|++. ..+ +| +.++++++ ++|+.+++++|++++|+++++..++.++.++||+|+++.|+|.++...++..
T Consensus 60 ~y~~~--~~~~lr------~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~ 131 (390)
T 1d2f_A 60 GYSRW--KNDEFL------AAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGN 131 (390)
T ss_dssp CCCCS--CCHHHH------HHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHT
T ss_pred CCCCC--ChHHHH------HHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHC
Confidence 35443 677 89 99999999 7888788899999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCC-CcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 81 DATPVILPTRISE-NFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 81 g~~v~~i~~~~~~-~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
|.+++.++++.++ ++.+|+++|++++++ ++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.++
T Consensus 132 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~ 210 (390)
T 1d2f_A 132 QRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERH-GVRVISDEIHMDMVWG 210 (390)
T ss_dssp TCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHT-TCEEEEECTTTTCBCS
T ss_pred CCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CCEEEEEccccccccC
Confidence 9999999987543 567899999999975 889999999999999999999999999999999 9999999999998887
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhh-cccc-CCChHHHHHHHHHhcccCCCh
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQS-QFTS-GASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~ 235 (352)
+....++..+...+ ... +.|+||.+|++|+|+||++++ +++++.+..... ..++ +++++.+.++.++++. ..
T Consensus 211 g~~~~~~~~~~~~~-~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~ 285 (390)
T 1d2f_A 211 EQPHIPWSNVARGD-WAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ---GA 285 (390)
T ss_dssp SSCCCCGGGTCCSS-EEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH---CH
T ss_pred CCCCcCHHHcchhh-Hhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc---CH
Confidence 65555555554322 123 999999999899999999985 788888877654 3443 7899999888888875 36
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 314 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~ 314 (352)
+++++.++.++++++.+.+.|++ +|++.+..+.+++++|++++... .+..++.+.|.+++||.+.||..
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~l~~~~gi~v~~g~~ 355 (390)
T 1d2f_A 286 PWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLN----------IDDNALQKALIEQEKVAIMPGYT 355 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGC----------CCHHHHHHHHHHTTCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccC----------CCHHHHHHHHHHHcCEEeeCccc
Confidence 77889999999999999999998 78998888888898899987530 16788999988656999999988
Q ss_pred CC--CCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 315 FG--DDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 315 ~~--~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
|+ .++++||+++.+++++++++++|++++++++
T Consensus 356 f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~~ 390 (390)
T 1d2f_A 356 YGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR 390 (390)
T ss_dssp GCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhhC
Confidence 75 3679999999988999999999999998753
No 29
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=7.2e-44 Score=329.62 Aligned_cols=320 Identities=17% Similarity=0.244 Sum_probs=273.1
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCc---EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQ---ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~---i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~ 78 (352)
..|+++.|..++| +.+|+++.+.++.+++++ |++|+|+++++..++.+++++||+|+++.|+|.++...++
T Consensus 82 ~~y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~ 155 (430)
T 2x5f_A 82 FPYAPPQGIEELR------DLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFN 155 (430)
T ss_dssp SSCCCTTCCHHHH------HHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHT
T ss_pred cccCCCCCCHHHH------HHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHH
Confidence 4687888999999 999999984446677888 9999999999999999999999999999999999999999
Q ss_pred h-cCCeEEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh-----CCCEEEEec
Q 018665 79 I-ADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-----HPRLLVLSD 149 (352)
Q Consensus 79 ~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~-----~~~~~livD 149 (352)
. .|.+++.++++.++ +.+|+++|++++++ +++++++++|+||||.++|.+++++|+++|++ + |+++|+|
T Consensus 156 ~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~-~~~li~D 233 (430)
T 2x5f_A 156 TRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGT-KVIAVVD 233 (430)
T ss_dssp TTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred HhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccC-CEEEEEe
Confidence 9 99999999987533 67899999999976 88999999999999999999999999999999 9 9999999
Q ss_pred ccccccccCCCCccccc-cCCCCCCc---eEEEeccccccccccceeEEEEc---ChhHHHHHHhhhhc----cccCCCh
Q 018665 150 EIYEHIIYAPATHTSFA-SLPGMWER---TLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNKIQSQ----FTSGASS 218 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~~~~---~i~~~s~sK~~g~~g~~~g~l~~---~~~~~~~~~~~~~~----~~~~~~~ 218 (352)
|+|+++.+++....++. .+....++ ++++.|+||.+|++|+|+||+++ ++++++.+...... .++++|+
T Consensus 234 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 313 (430)
T 2x5f_A 234 DAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPL 313 (430)
T ss_dssp CTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCH
T ss_pred hhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCCh
Confidence 99999887765444443 44322467 89999999999989999999999 99999988776544 5677999
Q ss_pred HHHHHHHHHhc-ccCCChHHHHHHHHHHHHHHHHHHHHhc----ccCCceecCCCCceEEEeecCCccCCcccCCCCCCC
Q 018665 219 ISQKAGVAALG-LGYAGGEVVSKMVKAFRERRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 293 (352)
Q Consensus 219 ~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
+.+.++.++++ .... .+.+++.++.++++++.+.+.|+ +. ++.+..+.+|+++|+++++. +
T Consensus 314 ~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~~~~g~~~~~~~~~~------------~ 379 (430)
T 2x5f_A 314 PTQSAVKHVLKNNKQF-DKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYDFNSGYFMAIKVHDV------------D 379 (430)
T ss_dssp HHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECCCCBSSEEEEEESSS------------C
T ss_pred HHHHHHHHHHccChHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeCCCceEEEEeCCCCC------------C
Confidence 99999999998 6211 22334488899999999999998 55 78888888899999998732 7
Q ss_pred hHHHHHHHHHccCEEeccCCCCCCCCeEEEEee-cCHHHHHHHHHHHHHHHhhhC
Q 018665 294 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-ASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 294 ~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~-~~~~~l~~~~~~l~~~~~~~~ 347 (352)
..++.+.|.+++||.+.|| .++++||+++ .+++++++++++|++++++++
T Consensus 380 ~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 430 (430)
T 2x5f_A 380 PEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIAKAIDDLR 430 (430)
T ss_dssp HHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 8899999987459999997 4679999999 588999999999999998753
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.5e-43 Score=323.34 Aligned_cols=315 Identities=24% Similarity=0.411 Sum_probs=277.3
Q ss_pred CCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEE
Q 018665 8 QGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
.+..+++ +.+++++. .+|+++++++|++++|+++++..++.+++++||+|+++.|+|.++...++..|.+++.
T Consensus 67 ~~~~~~~------~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~ 140 (391)
T 4dq6_A 67 TRPDSYN------ESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELII 140 (391)
T ss_dssp CCCHHHH------HHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEE
T ss_pred CCCHHHH------HHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEe
Confidence 3567888 99999999 7888788899999999999999999999999999999999999999999999999999
Q ss_pred eccc--CCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 87 LPTR--ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 87 i~~~--~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
++++ .++++.+|+++|++++++ ++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++....+
T Consensus 141 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~ 218 (391)
T 4dq6_A 141 SPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLGDICLKH-NVKIISDEIHSDIILKKHKHIP 218 (391)
T ss_dssp CCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCTTCCCCC
T ss_pred eeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CCEEEeeccccccccCCCCccC
Confidence 9987 456677999999999987 99999999999999999999999999999999 9999999999999888766666
Q ss_pred cccCCCC-CCceEEEeccccccccccceeEEEEcCh-hHHHHHHhhhhcc-ccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 165 FASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 165 ~~~~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
+..+..+ +++++++.|+||.+|++|+|+||+++++ ++++.+......+ ..+++++.+.++.++++. ..+++++.
T Consensus 219 ~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~ 295 (391)
T 4dq6_A 219 MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNN---GESWLESF 295 (391)
T ss_dssp GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH---CHHHHHHH
T ss_pred HHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc---hHHHHHHH
Confidence 6665432 4688999999999998999999999876 8888887764433 447889999999998886 36778899
Q ss_pred HHHHHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--C
Q 018665 242 VKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--D 318 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~ 318 (352)
+++++++++.+.+.|++ +|++.+..+.+++++|++++... .+..++.+.|.+++||.+.||..|+. +
T Consensus 296 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 365 (391)
T 4dq6_A 296 LEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALG----------LSDEELESILVQKGKVALNQGNSFGIGGS 365 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGC----------CCHHHHHHHHHHTTCEECEEGGGGCTTCT
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcC----------CCHHHHHHHHHHhCCEEeeCchhhCCCCC
Confidence 99999999999999988 68999999999999999987521 17889999999877999999988865 4
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
+++|++++.+++++++++++|++++
T Consensus 366 ~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 366 GYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp TEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 8999999999999999999999886
No 31
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.5e-43 Score=327.37 Aligned_cols=329 Identities=19% Similarity=0.356 Sum_probs=272.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH-
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLS--YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR- 78 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~--~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~- 78 (352)
.|+++.|..++| +.+|++++ .+|+. +++++|++++|+++++..++.+++++||+|+++.|+|.++...+.
T Consensus 78 ~Y~~~~g~~~lr------~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~ 151 (428)
T 1iay_A 78 NFQDYHGLPEFR------KAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRW 151 (428)
T ss_dssp HCCCTTCCHHHH------HHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTT
T ss_pred CCCCCCCcHHHH------HHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHH
Confidence 577777899999 99999999 77866 678999999999999999999999999999999999999987554
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
..|.+++.++.+.+.++.+|++++++++++ ++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|
T Consensus 152 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~ 230 (428)
T 1iay_A 152 RTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQH-NIHLVCDEIY 230 (428)
T ss_dssp TTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTT-TCEEEEECTT
T ss_pred hcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHC-CeEEEEeccc
Confidence 689999999987555677899999998863 688999999999999999999999999999999 9999999999
Q ss_pred cccccCCCCccccccCCCC-------CCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHH
Q 018665 153 EHIIYAPATHTSFASLPGM-------WERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAG 224 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~-------~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
+++.+++....++..+... .++++++.|+||.+|++|+|+||+++ ++++++.+...... ++.|++.+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~ 308 (428)
T 1iay_A 231 AATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSF--GLVSTQTQYFL 308 (428)
T ss_dssp GGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTT--SCCCHHHHHHH
T ss_pred cccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhc--ccCCHHHHHHH
Confidence 9987765433344443322 47889999999999999999999998 67888888765443 45889999999
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
.++++......+++++.++.++++++.+.+.|+++ |+.+..+.+|+++|+++++..... ...+..++.+.|.++
T Consensus 309 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~ 382 (428)
T 1iay_A 309 AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWMDLRPLLRES-----TFDSEMSLWRVIIND 382 (428)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEEECGGGCSSS-----SHHHHHHHHHHHHHT
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEechhhcCCC-----chhHHHHHHHHHHHh
Confidence 99998621012367788889999999999999988 888877778999999987531000 000345788888877
Q ss_pred cCEEeccCCCCCC--CCeEEEEee-cCHHHHHHHHHHHHHHHhhh
Q 018665 305 AQVALVPGDAFGD--DTCIRISYA-ASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 305 ~gi~i~~g~~~~~--~~~iRi~~~-~~~~~l~~~~~~l~~~~~~~ 346 (352)
+||.+.+|..|+. ++++||+++ .+++++++++++|++++++.
T Consensus 383 ~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 383 VKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp SCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 7999999987764 579999999 59999999999999998764
No 32
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=9.6e-44 Score=327.84 Aligned_cols=315 Identities=24% Similarity=0.368 Sum_probs=279.3
Q ss_pred ChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 10 TLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
..+++ +.+++++. .+++++++++|++++|+++|++.++.++.++||+|+++.|+|.++...++..|.+++.+|
T Consensus 98 ~~~l~------~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~ 171 (421)
T 3l8a_A 98 NDDLY------QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENS 171 (421)
T ss_dssp CHHHH------HHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEE
T ss_pred CHHHH------HHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEecc
Confidence 37788 99999999 888888899999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 89 TR-ISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 89 ~~-~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
++ .+.++.+|++.|+++++ ++++++++++|+||+|.+++.+++++|+++|+++ |+++|+||+|+++.+++....++.
T Consensus 172 ~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~ 250 (421)
T 3l8a_A 172 LQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKH-GVILVSDEIHQDLALFGNTHHSLN 250 (421)
T ss_dssp CEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGG
T ss_pred ccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCccHH
Confidence 87 45667789999999998 7899999999999999999999999999999999 999999999999998887667777
Q ss_pred cCCCC-CCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhc-cccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 167 SLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 167 ~~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
.+..+ .++++++.|+||.+|++|+|+|+++++ +++++.+...... ...++|++.+.++.++++. ..++++++.+
T Consensus 251 ~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~---~~~~~~~~~~ 327 (421)
T 3l8a_A 251 TLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQY---GKPWLEELKT 327 (421)
T ss_dssp GSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH---CHHHHHHHHH
T ss_pred HcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc---cHHHHHHHHH
Confidence 66543 578899999999999899999999998 8888888776533 3447899999999999985 3788999999
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CCeE
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCI 321 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~~i 321 (352)
+++++++++.+.|+++|++.+..+.++++.|++++... .+..++.+.|++++||.+.+|..|+. ++++
T Consensus 328 ~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~----------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~i 397 (421)
T 3l8a_A 328 VIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYA----------IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFA 397 (421)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGT----------CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEE
T ss_pred HHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccC----------CCHHHHHHHHHHhCCEEEECchhhCCCCCCEE
Confidence 99999999999999878999999999999999987521 16778999998777999999988864 6899
Q ss_pred EEEeecCHHHHHHHHHHHHHHHh
Q 018665 322 RISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~ 344 (352)
||+++.+++++++++++|+++++
T Consensus 398 Ri~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 398 RLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp EEECCSCHHHHHHHHHHHHHHC-
T ss_pred EEEecCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999875
No 33
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.8e-44 Score=334.10 Aligned_cols=334 Identities=21% Similarity=0.345 Sum_probs=273.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hc-CCCCCCCcEEEeCChHHHHHHHHHHhcCCCC----EEEecCCCCCChHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-EN-GLSYTPDQILVSNGAKQSILQAVLAVCSPGD----EVIIPAPFWVSYPEM 76 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~-~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~----~vl~~~~~~~~~~~~ 76 (352)
.|+++.|..++| +.+++++. ++ |+++++++|++|+|+++++..++.++.++|| .|+++.|+|..+...
T Consensus 124 ~Y~~~~G~~~lr------~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~ 197 (498)
T 3ihj_A 124 SYSASQGVNCIR------EDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAV 197 (498)
T ss_dssp ----CCSCHHHH------HHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHH
T ss_pred CCCCCCCHHHHH------HHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHH
Confidence 588999999999 99999999 66 5888899999999999999999999998875 999999999999999
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhccC-----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++..|.+++.++++++++|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|+++ |+++|+||+
T Consensus 198 ~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~-~~~li~De~ 276 (498)
T 3ihj_A 198 ISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEE-KLFLLADEV 276 (498)
T ss_dssp HHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECT
T ss_pred HHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CcEEEEEcC
Confidence 99999999999998877889999999999975 589999999999999999999999999999999 999999999
Q ss_pred ccccccCCC-CccccccCCC-------CCCceEEEecccccc-ccccceeEEEE---cChhHHHHHHhhhhccccCCChH
Q 018665 152 YEHIIYAPA-THTSFASLPG-------MWERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQSQFTSGASSI 219 (352)
Q Consensus 152 ~~~~~~~~~-~~~~~~~~~~-------~~~~~i~~~s~sK~~-g~~g~~~g~l~---~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
|+.+.+++. ...++..+.. ...++++++|+||.+ |++|+|+||++ .++++++.+..... ...+++.+
T Consensus 277 y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~-~~~~~~~~ 355 (498)
T 3ihj_A 277 YQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLS-VRLCPPVS 355 (498)
T ss_dssp TTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHH-HSCCCCHH
T ss_pred ccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHh-ccCCCCHH
Confidence 999888754 4455544311 123578999999999 88999999998 68899998887654 44578899
Q ss_pred HHHHHHHHhcccCC----ChH---HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccC--C--cccCC
Q 018665 220 SQKAGVAALGLGYA----GGE---VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG--S--EAEGF 288 (352)
Q Consensus 220 ~~~~~~~~l~~~~~----~~~---~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~--~--~~~~~ 288 (352)
.|.++..+++.... ... ..+++++.++++++.+.+.|+++||+.+..+++++++|++++.... . ...+
T Consensus 356 ~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g- 434 (498)
T 3ihj_A 356 GQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQ- 434 (498)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTT-
T ss_pred HHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcC-
Confidence 99988888864110 022 3456778899999999999999999999999999999976532100 0 0001
Q ss_pred CCCCChHHH-HHHHHHccCEEeccCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 289 GKIENSESL-CRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 289 ~~~~~~~~~-~~~l~~~~gi~i~~g~~~~~---~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+.+++ +.+++++.||.+.||+.|+. +.++|+++..+++++++++++|+++++++..
T Consensus 435 ---~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 435 ---MAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp ---SCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 144443 56666667999999999874 3599999988999999999999999987653
No 34
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=5.1e-44 Score=324.82 Aligned_cols=311 Identities=19% Similarity=0.281 Sum_probs=270.3
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCC--CCEEEecCCCCCChHHHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~--~~~vl~~~~~~~~~~~~~~ 78 (352)
..|++..|..++| +.+++++. ++|.++++++|++|+|+++++..++.+++++ ||+|+++.|+|.++...++
T Consensus 53 ~~y~~~~g~~~lr------~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~ 126 (376)
T 3ezs_A 53 NIYPKSAFEESLR------AAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAK 126 (376)
T ss_dssp GSCCCTTCCHHHH------HHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHH
T ss_pred CCCCCCCCCHHHH------HHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHH
Confidence 4588888899999 99999998 7788778899999999999999999999999 9999999999999999999
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
..|.+++.++++.+++ +++ ++++.++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.++
T Consensus 127 ~~g~~~~~~~~~~~~~--~~~-~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~ 202 (376)
T 3ezs_A 127 FIKAKSLLMPLTKEND--FTP-SLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKH-DFILINDECYSEIYEN 202 (376)
T ss_dssp HTTCEEEEEECCGGGT--SCC-CCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBSS
T ss_pred HcCCEEEEcccCCCCC--cch-hHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHc-CcEEEEEccchhhccC
Confidence 9999999999875444 344 66666767889999999999999999999999999999999 9999999999998877
Q ss_pred CCCccccccCCC-----CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCC
Q 018665 159 PATHTSFASLPG-----MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 159 ~~~~~~~~~~~~-----~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
+. ..++..... .+++++++.|+||.+|++|+|+||+++++++++.+.......+++++++.+.++.++++.
T Consensus 203 ~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--- 278 (376)
T 3ezs_A 203 TP-PPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLD--- 278 (376)
T ss_dssp SC-CCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC---
T ss_pred CC-CCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC---
Confidence 63 333333211 357899999999999889999999999999999998877777788999999999999986
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
.+++++.++.++++++.+.+.|+ ++. .+..++++|++++ +..++.+.|.+++||.+.||.
T Consensus 279 -~~~~~~~~~~~~~~~~~l~~~l~---~~~--~~~~~~~~~~~~~--------------~~~~~~~~l~~~~gi~v~~g~ 338 (376)
T 3ezs_A 279 -DRHAEFFRNIYANNLKLARKIFK---NTL--IYPYSFYVYLPVQ--------------NGENFAKTLYQNEGIITLPAL 338 (376)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHST---TCC--CCSBSSEEEEECS--------------CHHHHHHHHHHHHCCBCEEGG
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhc---CCC--CCCcceEEEEECC--------------CHHHHHHHHHHhCCEEEeCcH
Confidence 56788999999999999999998 444 5788899999886 467888998874599999998
Q ss_pred CCC----CCCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 314 AFG----DDTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 314 ~~~----~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
.|+ .++++||+++.+++++++++++|++++++.
T Consensus 339 ~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 339 YLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp GGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC-
T ss_pred HhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 886 458999999889999999999999998753
No 35
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.6e-43 Score=322.81 Aligned_cols=318 Identities=26% Similarity=0.499 Sum_probs=277.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..+..++| +.++++++ .+|+++++++|++++|+++++..++.++.++||+|+++.|+|.++...++..|
T Consensus 74 ~y~~~~g~~~l~------~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g 147 (409)
T 2gb3_A 74 YYSHSAGIWELR------EAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAG 147 (409)
T ss_dssp CCCCTTCCHHHH------HHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHT
T ss_pred CCCCCCCcHHHH------HHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcC
Confidence 577778899999 99999999 78888888999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++.++++.+ +++|+++++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++.
T Consensus 148 ~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~Dea~~~~~~~~~- 224 (409)
T 2gb3_A 148 VKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERH-GLFLIVDEVYSEIVFRGE- 224 (409)
T ss_dssp CEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCSSC-
T ss_pred CEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEECcccccccCCC-
Confidence 9999999875344445 8999999988899999999999999999999999999999999 999999999999877652
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
..++ +....++++++.|+||.+|++|+|+||+++++ ++++.+......++ +++++.+.++.++++. ...++++
T Consensus 225 ~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~---~~~~~~~ 298 (409)
T 2gb3_A 225 FASA--LSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNL---DDSFFDF 298 (409)
T ss_dssp CCCG--GGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC---CHHHHHH
T ss_pred CCCc--cccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhc---cHHHHHH
Confidence 2332 21223678999999999998999999999998 99998887766665 7899999999999975 3677889
Q ss_pred HHHHHHHHHHHHHHHhcccCCcee-cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc-----cCEEeccCCC
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-----AQVALVPGDA 314 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~i~~g~~ 314 (352)
+++.++++++.+.+.|+++ |+.+ ..+.+++++|+++++. +..++.+.|.++ +||.+.||..
T Consensus 299 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~l~~~~~~~~~gi~v~~g~~ 365 (409)
T 2gb3_A 299 VRETYRERVETVLKKLEEH-GLKRFTKPSGAFYITAELPVE------------DAEEFARWMLTDFNMDGETTMVAPLRG 365 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSSEEEEECSSS------------CHHHHHHHHHHSCCBTTEEEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHc-CceeeeCCCeeEEEEEEeCCC------------CHHHHHHHHHhccccccCcEEEeCchH
Confidence 9999999999999999988 8888 7788899999988732 788999999876 5999999987
Q ss_pred CCC-----CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 315 FGD-----DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 315 ~~~-----~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
|+. ++++|++++.+++++++++++|++++++++.
T Consensus 366 f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 366 FYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp GCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 753 6799999999999999999999999988765
No 36
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=7.5e-44 Score=329.97 Aligned_cols=331 Identities=21% Similarity=0.365 Sum_probs=276.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~--~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~ 78 (352)
..|++..|..++| +.++++++ .++ +++++++|++++|+++++..++.+++++||.|+++.|+|.++...++
T Consensus 80 ~~y~~~~g~~~l~------~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~ 153 (435)
T 3piu_A 80 ALFQDYHGLPAFK------KAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLK 153 (435)
T ss_dssp HHCCCTTCCHHHH------HHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTT
T ss_pred cccCCCCCcHHHH------HHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHH
Confidence 3588889999999 99999998 444 55678999999999999999999999999999999999999998888
Q ss_pred -hcCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 79 -IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 79 -~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
..|.+++.++++.+.++.+|++.|++++++ ++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+
T Consensus 154 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea 232 (435)
T 3piu_A 154 WRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDK-GIHLISDEI 232 (435)
T ss_dssp TTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECT
T ss_pred HhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEecc
Confidence 789999999998766678999999999975 789999999999999999999999999999999 999999999
Q ss_pred ccccccCCCCccccccCCCC---------CCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHH
Q 018665 152 YEHIIYAPATHTSFASLPGM---------WERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQ 221 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~---------~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
|+++.+++....++..+..+ +++++++.|+||.+|++|+|+||+++ ++.+.+.+...... ...+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 310 (435)
T 3piu_A 233 YSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQ 310 (435)
T ss_dssp TGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGG--SCCCHHHH
T ss_pred ccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhc--CCCCHHHH
Confidence 99988877655554443322 57889999999999999999999998 56677777665443 35788899
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHH
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 301 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (352)
.++.++++......+++++.+++++++++.+.+.|++. |+.+..+.+|+++|++++....... ..+..++.+.|
T Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~l~~~~~~~~-----~~~~~~~~~~l 384 (435)
T 3piu_A 311 HLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDMRHLLRSNT-----FEAEMELWKKI 384 (435)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSSEEEEECGGGSSSSS-----HHHHHHHHHHH
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEEcccccccCC-----chhHHHHHHHH
Confidence 99888887521112356777888999999999999988 8998888888999999876421000 00245788888
Q ss_pred HHccCEEeccCCCCC--CCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 302 LDKAQVALVPGDAFG--DDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 302 ~~~~gi~i~~g~~~~--~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
++++||.+.||..|+ .++++||+++. +++++++++++|++++++++
T Consensus 385 ~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 385 VYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp HHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 887799999998775 36899999988 99999999999999998765
No 37
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.4e-43 Score=332.85 Aligned_cols=335 Identities=21% Similarity=0.298 Sum_probs=276.9
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEecCCCCCChHHHHHh
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
..|++..|..++| +.++++++ ++|+++++++|++|+|+++++..++.+++ ++||.|+++.|+|..+...++.
T Consensus 128 ~~Y~~~~G~~~lr------~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~ 201 (500)
T 3tcm_A 128 GAYSHSQGIHGLR------DAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIAL 201 (500)
T ss_dssp SSCCCTTCCHHHH------HHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHH
T ss_pred CCcCCCcChHHHH------HHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHH
Confidence 3588899999999 99999999 88988899999999999999999999998 7999999999999999999999
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
.|.+++.++++++.+|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|+++ |+++|+||+|+
T Consensus 202 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~-~~~li~Deay~ 280 (500)
T 3tcm_A 202 HGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNE-GLVLLADEVYQ 280 (500)
T ss_dssp TTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTT
T ss_pred cCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEecCcc
Confidence 99999999999877889999999999975 788999999999999999999999999999999 99999999999
Q ss_pred ccccCCC-Ccccccc----CC--CCCCceEEEecccccc-ccccceeEEEEc---ChhHHHHHHhhhhccccCCChHHHH
Q 018665 154 HIIYAPA-THTSFAS----LP--GMWERTLTVNGFSKAF-AMTGWRLGYIAG---PKHFVAACNKIQSQFTSGASSISQK 222 (352)
Q Consensus 154 ~~~~~~~-~~~~~~~----~~--~~~~~~i~~~s~sK~~-g~~g~~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (352)
.+.+++. ...++.. +. ....+++++.|+||.+ |++|+|+||+++ ++++++.+..... ...+++.+.|.
T Consensus 281 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~ 359 (500)
T 3tcm_A 281 ENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIAS-VNLCSNITGQI 359 (500)
T ss_dssp TCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHH-TTCCCCHHHHH
T ss_pred ccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHh-cccCCCHHHHH
Confidence 9888543 3444432 21 2234679999999999 889999999998 8899998887653 45678999999
Q ss_pred HHHHHhcccCC-------ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeec--CCccCC--cccCCCCC
Q 018665 223 AGVAALGLGYA-------GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF--STYYGS--EAEGFGKI 291 (352)
Q Consensus 223 ~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~--~~~~~~--~~~~~~~~ 291 (352)
++..++..... ...+.++++++++++++.+.+.|+++||+.+..+++++++|+++ |...-. ...+.
T Consensus 360 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~--- 436 (500)
T 3tcm_A 360 LASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANK--- 436 (500)
T ss_dssp HHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTS---
T ss_pred HHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCC---
Confidence 99998874210 12456777888999999999999999999999999999999654 321000 00000
Q ss_pred CChHHHHHHHHHccCEEeccCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 292 ENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 292 ~~~~~~~~~l~~~~gi~i~~g~~~~~---~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
.....++..++++.||.+.||+.|+. ..++|++++.+++++++++++|+++++++.
T Consensus 437 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~ 495 (500)
T 3tcm_A 437 APDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFM 495 (500)
T ss_dssp CHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 01233445666667999999999874 358999999988999999999999987764
No 38
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=4.9e-43 Score=317.76 Aligned_cols=306 Identities=32% Similarity=0.549 Sum_probs=269.0
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|++..+..++| +.++++++ ++|+++++++|++++|+++++..++.+++++||+|+++.|+|.++...++..
T Consensus 60 ~~y~~~~~~~~l~------~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~ 133 (370)
T 2z61_A 60 THYTDSRGILELR------EKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFL 133 (370)
T ss_dssp CSCCCTTCCHHHH------HHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHT
T ss_pred cCCCCCCCCHHHH------HHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc
Confidence 3577778899999 99999999 7888888999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++ +|+++|+++++++++++++++|+||||.++| .+ |.++|+++ |+++|+||+|+++.+++.
T Consensus 134 g~~~~~v~--------~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~---~~-l~~~~~~~-~~~li~De~~~~~~~~g~ 200 (370)
T 2z61_A 134 GAKPVFCD--------FTVESLEEALSDKTKAIIINSPSNPLGEVID---RE-IYEFAYEN-IPYIISDEIYNGLVYEGK 200 (370)
T ss_dssp TCEEEEEC--------SSHHHHHHHCCSSEEEEEEESSCTTTCCCCC---HH-HHHHHHHH-CSEEEEECTTTTCBSSSC
T ss_pred CCEEEEeC--------CCHHHHHHhcccCceEEEEcCCCCCcCcccC---HH-HHHHHHHc-CCEEEEEcchhhcccCCC
Confidence 99999887 5899999999888999999999999999999 44 99999999 999999999999877653
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcc-cCCChHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-GYAGGEVVS 239 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~ 239 (352)
+.++..+....++++++.|+||.+|++|+|+||+++++++++.+......+++++|++.+.++.++++. . .++++
T Consensus 201 -~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~ 276 (370)
T 2z61_A 201 -CYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKET---EREIN 276 (370)
T ss_dssp -CCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH---HHHHH
T ss_pred -CcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC---HHHHH
Confidence 345555543457899999999999989999999999999999988877666678999999998888863 2 46778
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+.++.++++++.+.+.|+++ |+.+..+.+|+++|+++++ +..++.+.|.+++||.+.+|..|+.
T Consensus 277 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~~gi~v~~g~~f~~~~ 342 (370)
T 2z61_A 277 SMIKEFDRRRRLVLKYVKDF-GWEVNNPIGAYYVFPNIGE-------------DGREFAYKLLKEKFVALTPGIGFGSKG 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCBCCCCCBTTEECCBCSS-------------CHHHHHHHHHHHHCEECEEGGGGCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCeecCCCcceEEEEecCC-------------CHHHHHHHHHHhCCEEEeCchhhCCCC
Confidence 88999999999999999988 8888888889999988864 4678889988555999999988864
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 318 DTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
++++|++++.+++++++++++|+++++
T Consensus 343 ~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 343 KNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp SSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 689999999999999999999999875
No 39
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=7.8e-44 Score=328.83 Aligned_cols=321 Identities=21% Similarity=0.356 Sum_probs=277.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCC-CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLS-YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~-~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
.|+++.+..++| +.+++++. ++|++ +++++|++++|+++++..++.++.++||+|+++.|+|.++...++..
T Consensus 80 ~y~~~~g~~~lr------~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~ 153 (425)
T 1vp4_A 80 QYSTTEGDPVLK------QQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQY 153 (425)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT
T ss_pred CCCCCCCCHHHH------HHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc
Confidence 577778999999 99999998 55876 77899999999999999999999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC--------CeeEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE--------KSRLL-ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~--------~~~~i-~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
|.+++.++++.+ .+|+++|++++++ ++++| ++++|+||||.++|.+++++|+++|+++ |+++|+||+
T Consensus 154 g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~ 229 (425)
T 1vp4_A 154 LANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKY-DLFIVEDDP 229 (425)
T ss_dssp TCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEECC
Confidence 999999998742 3899999998875 78887 4789999999999999999999999999 999999999
Q ss_pred ccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhccc
Q 018665 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 231 (352)
|+++.+++....++..+.. .++++++.|+||.+| +|+|+||+++++++++.+......+++++|++.+.++.++++..
T Consensus 230 ~~~~~~~g~~~~~~~~~~~-~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 307 (425)
T 1vp4_A 230 YGALRYEGETVDPIFKIGG-PERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERY 307 (425)
T ss_dssp STTCBCSSCCCCCHHHHHC-TTTEEEEEESTTTTC-GGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHS
T ss_pred CccccCCCCCCcCHHHhCC-CCCEEEEeccccccc-cccceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcC
Confidence 9998887654455554432 468899999999999 99999999999999998887766666778999999999999863
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccc-C---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 232 YAGGEVVSKMVKAFRERRDFLVKSFGEL-E---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
.. .+++++.++.++++++.+.+.|++. + ++.+..+.+|+++|+++++.. +..++.+.|.++ ||
T Consensus 308 ~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~-gi 374 (425)
T 1vp4_A 308 DL-LEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF-----------DTWEMFEYAKRK-KV 374 (425)
T ss_dssp CH-HHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC-----------CTTTTHHHHHHH-TE
T ss_pred CH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC-----------CHHHHHHHHHHC-CC
Confidence 21 5678888899999999999999874 5 688887888999999997532 567788898887 99
Q ss_pred EeccCCCCC----CCCeEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 308 ALVPGDAFG----DDTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 308 ~i~~g~~~~----~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+.||..|+ .++++||+++. +++++++++++|+++++++..
T Consensus 375 ~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 375 FYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp ECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999998775 35799999998 799999999999999987644
No 40
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=5.3e-43 Score=321.52 Aligned_cols=320 Identities=20% Similarity=0.335 Sum_probs=276.9
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|+++.+..++| +.+++++. ++|+++++++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|.
T Consensus 71 y~~~~~~~~l~------~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~ 144 (407)
T 2zc0_A 71 YTPANGIPELR------EELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGA 144 (407)
T ss_dssp CCCTTCCHHHH------HHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTC
T ss_pred CCCCCCCHHHH------HHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCC
Confidence 77778899999 99999998 678777889999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhcc----C--CeeEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLT----E--KSRLL-ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~----~--~~~~i-~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
+++.++.+.+ .+|+++|+++++ + ++++| ++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++
T Consensus 145 ~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~ 220 (407)
T 2zc0_A 145 KIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKY-DLLIIEDTAYNFM 220 (407)
T ss_dssp EEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTS
T ss_pred EEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEECCCccc
Confidence 9999998642 389999999987 5 78887 4788999999999999999999999999 9999999999998
Q ss_pred ccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCCh
Q 018665 156 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
.+++....++..+.. .++++++.|+||.+| +|+|+||+++++++++.+......++.+++++.+.++.++++.... .
T Consensus 221 ~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~ 297 (407)
T 2zc0_A 221 RYEGGDIVPLKALDN-EGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYF-E 297 (407)
T ss_dssp BSSCSSCCCGGGGCS-SCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHH-H
T ss_pred ccCCCCCCChhhcCC-CCCEEEEcccccccC-CCcceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCc-h
Confidence 876654455555543 468899999999999 9999999999999999988877666777899999999999986211 3
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 236 -EVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 236 -~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
+++++.++.++++++.+.+.|++ .+++.+..+.+++++|+++++.. +..++.+.|.+++||.+.+|.
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~~gi~v~~g~ 366 (407)
T 2zc0_A 298 KYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGA-----------DGISFANELMEREGVVVVPGK 366 (407)
T ss_dssp HHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTC-----------CHHHHHHHHHHHTCEECBCSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCC-----------CHHHHHHHHHHhCCeEEECch
Confidence 55677888889999999999987 47788877888889999987532 688899999887799999998
Q ss_pred CCC----CCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 314 AFG----DDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 314 ~~~----~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
.|. .++++||+++. +++++++++++|+++++++.
T Consensus 367 ~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 367 PFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp GGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHHC
T ss_pred hccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHh
Confidence 775 35799999998 78999999999999998764
No 41
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.6e-43 Score=326.56 Aligned_cols=319 Identities=17% Similarity=0.178 Sum_probs=277.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCC--EEEecCCCCCChHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGD--EVIIPAPFWVSYPEM 76 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~--~vl~~~~~~~~~~~~ 76 (352)
..|++..|..++| +.++++++ ++|+++++++|++|+|+++++..++.++. ++|| +|+++.|+|.++...
T Consensus 76 ~~y~~~~g~~~lr------~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~ 149 (437)
T 3g0t_A 76 SIYPNLDGLPELK------QEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQ 149 (437)
T ss_dssp GSCCCTTCCHHHH------HHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHH
T ss_pred cCCCCCCChHHHH------HHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHH
Confidence 4588888899999 99999999 88998899999999999999999999998 9999 999999999999999
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhc-cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
++..|.+++.++++ ++++.+|+++|++++ ++++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++
T Consensus 150 ~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~-~~~li~De~~~~~ 227 (437)
T 3g0t_A 150 CRILGQKFESFDLF-EYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKH-DVIVIEDLAYFGM 227 (437)
T ss_dssp HHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTC
T ss_pred HHHcCCEEEEEeec-CCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC-CcEEEEEcchhhc
Confidence 99999999999997 456678999999999 67899999999999999999999999999999999 9999999999987
Q ss_pred ccCCCCcc----cc-ccCCCCCCceEEEeccccccccccceeEEEEcChhHHH-H-----------------HHhhhhcc
Q 018665 156 IYAPATHT----SF-ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA-A-----------------CNKIQSQF 212 (352)
Q Consensus 156 ~~~~~~~~----~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~-~-----------------~~~~~~~~ 212 (352)
.+.+.... ++ ..+....++++++.|+||.+|++|+|+||+++++++++ . +.......
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (437)
T 3g0t_A 228 DFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYAL 307 (437)
T ss_dssp CTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHH
T ss_pred ccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhh
Confidence 77632211 11 33333367889999999999999999999999999988 7 76666656
Q ss_pred ccCCChHHHHHHHHHhcccCCChHH---HHHHHHHHHHHHHHHHHHhcccCCceec------CC-CCceEEEeecCCccC
Q 018665 213 TSGASSISQKAGVAALGLGYAGGEV---VSKMVKAFRERRDFLVKSFGELEGVKMS------EP-QGAFYLFIDFSTYYG 282 (352)
Q Consensus 213 ~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~g~~~~------~~-~~g~~~~~~~~~~~~ 282 (352)
+++++.+.+.++.++++.. ..+ +++.+++++++++.+.+.|+++ |+.+. .+ .+++++|+++++.
T Consensus 308 ~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 381 (437)
T 3g0t_A 308 SSGATHSAQWGMAAMLKAC---NDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGM-- 381 (437)
T ss_dssp HSSSCHHHHHHHHHHHHHH---HTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETTC--
T ss_pred cCCCCHHHHHHHHHHHhCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCCC--
Confidence 6789999999999999862 223 8889999999999999999998 88887 34 8899999998832
Q ss_pred CcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCC--CeEEEEeec-CHHHHHHHHHHHHHHHhh
Q 018665 283 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD--TCIRISYAA-SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~--~~iRi~~~~-~~~~l~~~~~~l~~~~~~ 345 (352)
+..++.+.|.++ ||.+.|+..|+.. +++||+++. +++++++++++|++++++
T Consensus 382 ----------~~~~l~~~L~~~-gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 382 ----------DSSKLIEKFVRY-GMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp ----------CHHHHHHHHHHT-TEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHc-CeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 788999999976 9999999877643 789999998 899999999999998764
No 42
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=3.2e-43 Score=327.03 Aligned_cols=314 Identities=24% Similarity=0.385 Sum_probs=271.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|++..|..++| +++++++. +|+.+++++|++++|+++++..+ .+++++||+|+++.|+|.++...++..|.
T Consensus 106 ~y~~~~g~~~lr------~~ia~~~~-~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~ 177 (449)
T 3qgu_A 106 GYGAEQGQGALR------EAVASTFY-GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGM 177 (449)
T ss_dssp CSTTTTCCHHHH------HHHHHHHH-TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTC
T ss_pred CCCCCCCcHHHH------HHHHHHHH-cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCC
Confidence 577888999999 99999998 77778899999999999999988 88889999999999999999999999999
Q ss_pred e----------EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 83 T----------PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 83 ~----------v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
+ ++.++++.++++..|++++ +++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|
T Consensus 178 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~-~~~li~Dea~ 251 (449)
T 3qgu_A 178 TGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKN-GSILVYDAAY 251 (449)
T ss_dssp SCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTT
T ss_pred cccccccccceeEEEecccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC-CcEEEEEcch
Confidence 8 9999987655555565432 5789999999999999999999999999999999 9999999999
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHH--------HHHhhhhccccCCChHHHHHH
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA--------ACNKIQSQFTSGASSISQKAG 224 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 224 (352)
+++.+++....++..+....++++++.|+||.+|++|+|+||+++++++++ .+.........+++++.+.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 331 (449)
T 3qgu_A 252 ALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGG 331 (449)
T ss_dssp GGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHH
T ss_pred HhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHH
Confidence 999887766667776665567889999999999999999999999988765 444444444557899999999
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
.+++... ..+++++.+++++++++++.+.|+++ |+.+..+.+++++|+.+++. ++.++++.|+++
T Consensus 332 ~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~ 396 (449)
T 3qgu_A 332 LACLQPE--GLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFPGK------------PSWDVFAEILER 396 (449)
T ss_dssp HHHTSHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECTTS------------CHHHHHHHHHHH
T ss_pred HHHHhhc--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECCCC------------CHHHHHHHHHHH
Confidence 9998741 13678888999999999999999988 89888888899999999832 788999999987
Q ss_pred cCEEeccCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 305 AQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 305 ~gi~i~~g~~~~~--~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+||.+.||..|+. ++++||++..+++++++++++|++++++
T Consensus 397 ~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 397 CNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp HCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHC-
T ss_pred CCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 7999999988864 5899999888999999999999999864
No 43
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.2e-42 Score=316.47 Aligned_cols=313 Identities=28% Similarity=0.496 Sum_probs=265.6
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
..|++..+..++| +.++++++ .++++|++++|+++++..++.++.++||+|+++.|+|.++...++..|
T Consensus 55 ~~y~~~~~~~~l~------~~la~~~~-----~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g 123 (381)
T 1v2d_A 55 DQYAPPAGLPALR------EALAEEFA-----VEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAG 123 (381)
T ss_dssp CSCCCTTCCHHHH------HHHHHHHT-----SCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTT
T ss_pred cCCCCCCCCHHHH------HHHHHhcC-----CChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcC
Confidence 4577777899999 99999986 667899999999999999999999999999999999999999999999
Q ss_pred CeEEEeccc--CCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCC
Q 018665 82 ATPVILPTR--ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 159 (352)
Q Consensus 82 ~~v~~i~~~--~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~ 159 (352)
.+++.++++ . .++.+|+++|++.++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+ +
T Consensus 124 ~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~-g 200 (381)
T 1v2d_A 124 AKARLVRLDLTP-EGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAH-DLFLISDEVYDELYY-G 200 (381)
T ss_dssp CEEEEEECEEET-TEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBS-S
T ss_pred CEEEEEeCCCCC-ccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHc-CCEEEEEcCcccccc-C
Confidence 999999986 2 2367899999999988899999999999999999999999999999999 999999999998876 4
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
....++..+ ..++++++.|+||.+|++|+|+||+++++++++.+.......+++++++.+.++.++++.... .++++
T Consensus 201 ~~~~~~~~~--~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~ 277 (381)
T 1v2d_A 201 ERPRRLREF--APERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARR-EGFYE 277 (381)
T ss_dssp SCCCCHHHH--CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-TTHHH
T ss_pred CCCCCHHHh--cCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCccc-HHHHH
Confidence 434444444 357889999999999989999999999999999888766655677899999999999875210 45678
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-- 317 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-- 317 (352)
+++++++++++++.+.|++. |+.+..+.+|+++|+++++. + +.+.|. ++||.+.+|..|+.
T Consensus 278 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------~---~~~~l~-~~gi~v~~g~~~~~~~ 340 (381)
T 1v2d_A 278 ALREGYRRRRDLLAGGLRAM-GLRVYVPEGTYFLMAELPGW------------D---AFRLVE-EARVALIPASAFYLED 340 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCEECCSBSSEEEEECTTC------------C---HHHHHH-HTCEECEEGGGGCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCEecCCCcceEEEEecChH------------h---HHHHHH-hCCEEEecchHhCCCC
Confidence 88999999999999999986 88888888888899988742 2 444444 56999999988763
Q ss_pred --CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 318 --DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 --~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++++|++++.+++++++++++|++++++.+.
T Consensus 341 ~~~~~iRi~~~~~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 341 PPKDLFRFAFCKTEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp CCTTEEEEECCSCHHHHHHHHHHHHHHC-----
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHhhccc
Confidence 6799999999999999999999999988765
No 44
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=3.5e-42 Score=310.42 Aligned_cols=298 Identities=21% Similarity=0.350 Sum_probs=253.9
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHHhc
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~~~ 80 (352)
..|++ .+..++| +++|++++ +++++|++++|+++++..++.+++++| |+|+++.|+|.++...++..
T Consensus 53 ~~Y~~-~~~~~lr------~~la~~~~-----~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~ 120 (356)
T 1fg7_A 53 NRYPE-CQPKAVI------ENYAQYAG-----VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI 120 (356)
T ss_dssp TSCCC-SSCHHHH------HHHHHHHT-----SCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHH
T ss_pred ccCCC-ccHHHHH------HHHHHHhC-----CChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHc
Confidence 45644 4588999 99999996 677899999999999999999999999 99999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++ .++.+|+++++++++ +++++++++||||||.++|.+++++|+++|+ + |+++|+||+|+++..
T Consensus 121 g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~-~~~li~De~~~~~~~--- 192 (356)
T 1fg7_A 121 GVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-G-KAIVVADEAYIEFCP--- 192 (356)
T ss_dssp TCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-T-TCEEEEECTTGGGSG---
T ss_pred CCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-C-CCEEEEEccchhhcC---
Confidence 9999999886 456789999999998 8999999999999999999999999999999 9 999999999998652
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHH--H
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV--V 238 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~ 238 (352)
..++..+...+++++++.|+||.+|++|+|+||+++++++++.+......+ ++|++.+.++.++++. ..+ +
T Consensus 193 -~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~----~~~~~~ 265 (356)
T 1fg7_A 193 -QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPY--PLSTPVADIAAQALSP----QGIVAM 265 (356)
T ss_dssp -GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSS--CSCHHHHHHHHHHTSH----HHHHHH
T ss_pred -CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcC----ccHHHH
Confidence 133333333357899999999999999999999999999999888765444 6899999999999975 333 8
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc-CCCCCC
Q 018665 239 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP-GDAFGD 317 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~-g~~~~~ 317 (352)
++.+++++++++++.+.|++++++....+..++++|++++ ++.++.+.|.+ +||.+.+ |..|+.
T Consensus 266 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~L~~-~gI~v~~~g~~~~~ 330 (356)
T 1fg7_A 266 RERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--------------ASSAVFKSLWD-QGIILRDQNKQPSL 330 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--------------THHHHHHHHHH-TTEECEECTTSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC--------------CHHHHHHHHHH-CCEEEEECCCCCCC
Confidence 8889999999999999999885543445667888899875 46688888865 5999999 887777
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHH
Q 018665 318 DTCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 318 ~~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
++++||+++ +++|+++++++|+++
T Consensus 331 ~~~iRis~~-~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 331 SGCLRITVG-TREESQRVIDALRAE 354 (356)
T ss_dssp TTEEEEECC-CHHHHHHHHHHHHTC
T ss_pred CCeEEEEeC-CHHHHHHHHHHHHhh
Confidence 789999998 478999999988764
No 45
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.3e-42 Score=318.00 Aligned_cols=315 Identities=20% Similarity=0.374 Sum_probs=271.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++.+..++| +.++++++ +++++|++++|+++++..++.++.++||+|+++.|+|.++...++..|.
T Consensus 69 ~y~~~~~~~~l~------~~la~~~g-----~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~ 137 (397)
T 2zyj_A 69 QYSPTEGYAPLR------AFVAEWIG-----VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGP 137 (397)
T ss_dssp SCCCTTCCHHHH------HHHHHHHT-----SCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCC
T ss_pred CCCCCCCCHHHH------HHHHHHhC-----CChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCC
Confidence 577778899999 99999995 6778999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccC-CeeEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTE-KSRLL-ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i-~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
+++.++.+.+ .+|+++|++++++ ++++| ++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++.
T Consensus 138 ~~~~~~~~~~---~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~ 213 (397)
T 2zyj_A 138 RFLTVPAGEE---GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMER-GLVVVEDDAYRELYFGEA 213 (397)
T ss_dssp EEEEEEEETT---EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBCSSC
T ss_pred EEEecCcCCC---CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc-CCEEEEeCCcccccCCCC
Confidence 9999998642 3899999999975 78887 5789999999999999999999999999 999999999999887765
Q ss_pred CccccccCCCC--CCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 161 THTSFASLPGM--WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 161 ~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
...++..+..+ +++++++.|+||.+| +|+|+||+++++++++.+......+++++|++.+.++.++++... .+++
T Consensus 214 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~ 290 (397)
T 2zyj_A 214 RLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGF--SERL 290 (397)
T ss_dssp CCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTH--HHHH
T ss_pred CCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC--HHHH
Confidence 44455444321 167899999999999 999999999999999988876666666789999999999998621 1568
Q ss_pred HHHHHHHHHHHHHHHHHhcc-cC-CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 239 SKMVKAFRERRDFLVKSFGE-LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~-~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
++.++.++++++.+.+.|++ +| |+.+..+.+|+++|++++... +..++.+.|.++ ||.+.+|..|+
T Consensus 291 ~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~l~~~-gi~v~~g~~f~ 358 (397)
T 2zyj_A 291 ERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGL-----------SAEGLFRRALEE-NVAFVPGGPFF 358 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTC-----------CHHHHHHHHHHT-TEEEEESGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCC-----------CHHHHHHHHHHC-CCEEechHHhc
Confidence 88888999999999999987 46 688887888999999987532 678899999987 99999998775
Q ss_pred ----CCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 317 ----DDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 317 ----~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
.++++||+++. +++++++++++|+++++++.
T Consensus 359 ~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 359 ANGGGENTLRLSYATLDREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp TTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35799999998 79999999999999987653
No 46
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.4e-42 Score=311.65 Aligned_cols=302 Identities=20% Similarity=0.274 Sum_probs=260.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|++..+ .++| +.+|++++ +++++|++++|+++++..++.+++++||+|+++.|+|.++...++..|.
T Consensus 61 ~y~~~~~-~~lr------~~la~~~~-----~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~ 128 (365)
T 3get_A 61 LYPDDSM-IELK------STLAQKYK-----VQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGA 128 (365)
T ss_dssp SCCCTTC-HHHH------HHHHHHHT-----CCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTC
T ss_pred cCCCCCh-HHHH------HHHHHHhC-----CCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCC
Confidence 4554444 8899 99999996 6789999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc--CCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY--APA 160 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~--~~~ 160 (352)
+++.+++ .+.++ +|++++++++++++++|++++|+||||.++|.+++++|+++| ++ |+++|+||+|+++.+ .+.
T Consensus 129 ~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~~-~~~li~De~~~~~~~~~~~~ 204 (365)
T 3get_A 129 KCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV-NE-DCLVVIDAAYNEFASFKDSK 204 (365)
T ss_dssp EEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTS-CT-TSEEEEECTTHHHHHHHCGG
T ss_pred EEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-CC-CcEEEEeCccHHHhcccCCc
Confidence 9999998 33567 999999999999999999999999999999988888888888 78 999999999998775 433
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
...+........++++++.|+||.+|++|+|+||+++++++++.+...... +++|.+.+.++.++++. .+++++
T Consensus 205 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~----~~~~~~ 278 (365)
T 3get_A 205 KHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAP--FNVSNLALKAAVAAMDD----DEFTEK 278 (365)
T ss_dssp GCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCT--TCSCHHHHHHHHHHHTC----HHHHHH
T ss_pred ccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcCC--CCcCHHHHHHHHHHhCC----HHHHHH
Confidence 333333322235788999999999999999999999999999998876554 45999999999999985 688899
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCe
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 320 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~ 320 (352)
.+++++++++.+.+.|+++ ++.+..+.+ .++|+++++. +..++.+.|.++ ||.+.+|..|+ +++
T Consensus 279 ~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~~~~~~~~~~------------~~~~~~~~l~~~-gi~v~~g~~~~-~~~ 342 (365)
T 3get_A 279 TLENNFSQMELYKEFAKKH-NIKIIDSYT-NFITYFFDEK------------NSTDLSEKLLKK-GIIIRNLKSYG-LNA 342 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCEECCCSS-SEEEEECSSS------------CHHHHHHHHHTT-TEECEECGGGT-CSE
T ss_pred HHHHHHHHHHHHHHHHHhC-CCEECCCCC-eEEEEECCCC------------CHHHHHHHHHHC-CEEEEECccCC-CCE
Confidence 9999999999999999988 888765554 5588998764 678899998875 99999999888 899
Q ss_pred EEEEeecCHHHHHHHHHHHHHHH
Q 018665 321 IRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
+|++++ ++++++++++.|++++
T Consensus 343 iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 343 IRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EEEECC-CHHHHHHHHHHHHHHH
T ss_pred EEEEcC-CHHHHHHHHHHHHHHh
Confidence 999998 7899999999999876
No 47
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=7.7e-42 Score=307.97 Aligned_cols=301 Identities=18% Similarity=0.248 Sum_probs=260.9
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
+..+..++| +.++++++ +++++|++++|+++++..++.++.++||+|+++.|+|.++...++..|.+++
T Consensus 49 ~~~~~~~l~------~~la~~~~-----~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~ 117 (354)
T 3ly1_A 49 AKNEILMLG------NKLAAHHQ-----VEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVT 117 (354)
T ss_dssp CHHHHHHHH------HHHHHHTT-----SCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEE
T ss_pred CCCchHHHH------HHHHHHhC-----CChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEE
Confidence 556778888 99999986 6789999999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCcccCHHHHHhhcc--CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 86 ILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
.++++. ++.+|+++|+++++ ++++++++++|+||||.++|.+++++|+++| ++ |+++|+||+|+++.+++....
T Consensus 118 ~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~-~~~li~De~~~~~~~~~~~~~ 193 (354)
T 3ly1_A 118 KVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASK-PA-NTMFIVDEAYAEFVNDPRFRS 193 (354)
T ss_dssp EECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC-CT-TEEEEEECTTGGGCCCTTCCC
T ss_pred EecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CC-CeEEEEeccHHHhccccccCC
Confidence 999873 46799999999998 7899999999999999999999999999888 89 999999999998877654333
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
.+.......++++++.|+||.+|++|+|+||+++++++++.+...... +++|++.+.++.++++. .+++++.++
T Consensus 194 ~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~----~~~~~~~~~ 267 (354)
T 3ly1_A 194 ISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAG--EKINFSGVDAALASMND----SAFITYSKK 267 (354)
T ss_dssp SHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTC--SCCCHHHHHHHHHHTTC----HHHHHHHHH
T ss_pred HHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcC----HHHHHHHHH
Confidence 332222222788999999999999999999999999999998876654 57999999999999985 578899999
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEE
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 323 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi 323 (352)
+++++++.+.+.|+++ ++.+.++ .|.++|++++. +..++.+.|.++ ||.+. |..++.++++||
T Consensus 268 ~~~~~~~~l~~~l~~~-~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~l~~~-gi~v~-g~~~~~~~~iRi 330 (354)
T 3ly1_A 268 SNDVSRQILLKALEDL-KLPYLPS-EGNFVFHQLVV-------------PLKDYQTHMADA-GVLIG-RAFPPADNWCRI 330 (354)
T ss_dssp HHHHHHHHHHHHHHHH-TCCBCCC-CSSEEEEECSS-------------CHHHHHHHHHHT-TEECC-CCCTTCTTEEEE
T ss_pred HHHHHHHHHHHHHHHC-CCeECCC-CceEEEEECCC-------------CHHHHHHHHHHC-CEEEe-ecCCCCCCEEEE
Confidence 9999999999999988 8887754 55668898874 577899998865 99998 776667899999
Q ss_pred EeecCHHHHHHHHHHHHHHHhh
Q 018665 324 SYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 324 ~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+++ ++++++++++.|++++++
T Consensus 331 s~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 331 SLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp ECC-CHHHHHHHHHHHHHHHHT
T ss_pred EcC-CHHHHHHHHHHHHHHHHh
Confidence 987 689999999999999875
No 48
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=6.8e-42 Score=316.05 Aligned_cols=315 Identities=14% Similarity=0.154 Sum_probs=264.7
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHH--HHHHHHhcC--C----------CCEEEecC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSI--LQAVLAVCS--P----------GDEVIIPA 67 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~--~~~~~~l~~--~----------~~~vl~~~ 67 (352)
..|++..|..++| +.+|++++ +++++|++|+|+++++ +.++.++.+ + ||+|++++
T Consensus 72 ~~Y~~~~g~~~lr------~~ia~~~~-----~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~ 140 (427)
T 3ppl_A 72 RNYGGLDGIVDIR------QIWADLLG-----VPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPV 140 (427)
T ss_dssp TSSCCSSCCHHHH------HHHHHHHT-----SCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEE
T ss_pred cCCCCCCCcHHHH------HHHHHHhC-----CCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcC
Confidence 4688889999999 99999996 7889999999999999 578888766 5 89999999
Q ss_pred CCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEc-CCCCCcccCCCHHHHHHHHHHH-HhCCCE
Q 018665 68 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILC-SPSNPTGSVYPKNLLDEIARIV-AKHPRL 144 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~-~p~nptG~~~~~~~l~~l~~~~-~~~~~~ 144 (352)
|+|..+...++..|.+++.++++.+ ++|+++|+++++ +++++|+++ +||||||.++|.+++++|+++| +++ |+
T Consensus 141 p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~-~~ 216 (427)
T 3ppl_A 141 PGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAP-DF 216 (427)
T ss_dssp SCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST-TC
T ss_pred CCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcC-CC
Confidence 9999999999999999999999753 389999999995 678888765 7899999999999999999999 999 99
Q ss_pred EEEecccccccccCCCCc--cccccC---CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChH
Q 018665 145 LVLSDEIYEHIIYAPATH--TSFASL---PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSI 219 (352)
Q Consensus 145 ~livD~~~~~~~~~~~~~--~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
++|+||+|+++.+.+... .++..+ ....++++++.|+||. +++|+|+||+++++++++.+.........+++++
T Consensus 217 ~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~ 295 (427)
T 3ppl_A 217 RVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKV 295 (427)
T ss_dssp EEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHH
T ss_pred EEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEEEcCHHHHHHHHHHhhcccCCCCHH
Confidence 999999999977765432 233332 1235789999999999 5699999999999999999988877777889999
Q ss_pred HHHHHHHHhcc-cCCChHHHHHHHHHHHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCCh
Q 018665 220 SQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 294 (352)
Q Consensus 220 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
.|.++.++++. +.. ..++++.++.++++++.+.+.|.+ ++++.+..+++|+++|+++++. +.
T Consensus 296 ~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~------------~~ 362 (427)
T 3ppl_A 296 NQLAHARYFGDAEGV-RAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG------------TA 362 (427)
T ss_dssp HHHHHHHHHCSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT------------CH
T ss_pred HHHHHHHHHhChhhH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc------------hH
Confidence 99999999986 211 456777788888888888777754 3357778888999999999864 67
Q ss_pred HHHHHHHHHccCEEeccCC-CCC-----CCCeEEEEeec-CHHHHHHHHHHHHHHHhhh
Q 018665 295 ESLCRYLLDKAQVALVPGD-AFG-----DDTCIRISYAA-SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~-~~~-----~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~ 346 (352)
.++.+.|.++ ||.+.||+ .|. .++++||+++. +++++++++++|+++++++
T Consensus 363 ~~~~~~l~~~-gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 363 SRVAELAKEA-GIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp HHHHHHHHHT-TEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 7888877755 99999944 443 35799999988 8999999999999998765
No 49
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-41 Score=305.56 Aligned_cols=300 Identities=19% Similarity=0.269 Sum_probs=257.9
Q ss_pred CCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeE
Q 018665 5 RVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 84 (352)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v 84 (352)
+++.+..++| +.++++++ +++++|++++|+++++..++.+++++||+|+++.|+|.++...++..|.++
T Consensus 64 y~~~~~~~lr------~~la~~~~-----~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~ 132 (363)
T 3ffh_A 64 YPDGWASSLR------KEVADFYQ-----LEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEV 132 (363)
T ss_dssp C----CHHHH------HHHHHHHT-----CCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEE
T ss_pred CCCcchHHHH------HHHHHHhC-----CChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEE
Confidence 3667889999 99999997 678999999999999999999999999999999999999999999999999
Q ss_pred EEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 85 VILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 85 ~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
+.+++++ ++.+|+++++++++++++++++++|+||||.++|.+++.+|++.|+ . |+++|+||+|+++.+ +.. .+
T Consensus 133 ~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~-~-~~~li~De~~~~~~~-~~~-~~ 206 (363)
T 3ffh_A 133 REIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVP-S-DVLVVLDEAYIEYVT-PQP-EK 206 (363)
T ss_dssp EEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSC-T-TSEEEEECTTGGGCS-SCC-CC
T ss_pred EEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCC-C-CcEEEEeCchHhhcC-ccc-cC
Confidence 9999874 5679999999999989999999999999999999777777777664 3 799999999998876 432 23
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
........++++++.|+||.+|++|+|+||+++++++++.+..... ++++|.+.+.++.++++. .+++++.+++
T Consensus 207 ~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~----~~~~~~~~~~ 280 (363)
T 3ffh_A 207 HEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRP--PFNTTSIGQKLAIEAIKD----QAFIGECRTS 280 (363)
T ss_dssp CGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCC--SCCCBHHHHHHHHHHHHC----HHHHHHHHHH
T ss_pred HHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCC--CCCCCHHHHHHHHHHhcC----HHHHHHHHHH
Confidence 3333333678999999999999999999999999999999887654 456999999999999985 6888999999
Q ss_pred HHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEE
Q 018665 245 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 324 (352)
Q Consensus 245 ~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~ 324 (352)
++++++++.+.|++++++.+..+. +.++|++++. +..++.+.|.++ ||.+.+|..|+.++++|++
T Consensus 281 ~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~-------------~~~~~~~~l~~~-gi~v~~g~~~~~~~~iRis 345 (363)
T 3ffh_A 281 NANGIKQYEAFAKRFEKVKLYPAN-GNFVLIDLGI-------------EAGTIFSYLEKN-GYITRSGAALGFPTAVRIT 345 (363)
T ss_dssp HHHHHHHHHHHHHHCTTCEECCCC-SSEEEEECSS-------------CHHHHHHHHHHT-TEECEETTTTTCTTEEEEE
T ss_pred HHHHHHHHHHHHhhCCCceECCCC-CeEEEEECCC-------------CHHHHHHHHHHC-CeEEEeCccCCCCCeEEEE
Confidence 999999999999986688887544 5568888874 678899998875 9999999998888999999
Q ss_pred eecCHHHHHHHHHHHHHHH
Q 018665 325 YAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 325 ~~~~~~~l~~~~~~l~~~~ 343 (352)
++ +++|++++++.|++++
T Consensus 346 ~~-~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 346 IG-KEEDNSAVIALLEKLL 363 (363)
T ss_dssp CC-CHHHHHHHHHHHHHHC
T ss_pred CC-CHHHHHHHHHHHHHhC
Confidence 98 7899999999998763
No 50
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1.6e-41 Score=314.05 Aligned_cols=314 Identities=24% Similarity=0.397 Sum_probs=264.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|++..+..+++ +++++++. .++.+++++|++++|+++++.. +..++++||.|+++.|+|.++...++..|.
T Consensus 93 ~y~~~~g~~~l~------~~ia~~~~-~~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~ 164 (432)
T 3ei9_A 93 GYGAEQGAKPLR------AAIAKTFY-GGLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQ 164 (432)
T ss_dssp CCCCTTCCHHHH------HHHHHHHH-TTTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTC
T ss_pred CCCCCCCCHHHH------HHHHHHHH-ccCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCC
Confidence 477788999999 99999997 3556788999999999999986 577788999999999999999999888773
Q ss_pred ------------eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 83 ------------TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 83 ------------~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
+++.++++.++++..|+++ .++++++++++|+||||.+++.+++++|+++|+++ |+++|+||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~-~~~li~De 238 (432)
T 3ei9_A 165 TGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKN-GSIIVYDS 238 (432)
T ss_dssp SCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEC
T ss_pred cccccccccccCceEEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEcc
Confidence 6788888754454455443 35789999999999999999999999999999999 99999999
Q ss_pred cccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhH--------HHHHHhhhhccccCCChHHHH
Q 018665 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF--------VAACNKIQSQFTSGASSISQK 222 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 222 (352)
+|+++.+++. ..++..+....++++++.|+||.+|++|+|+||+++++++ ++.+.........+++++.+.
T Consensus 239 a~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (432)
T 3ei9_A 239 AYAMYMSDDN-PRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQA 317 (432)
T ss_dssp TTGGGCCSSC-CSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHH
T ss_pred chHhhccCCC-CCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHH
Confidence 9999877653 3455555444578899999999999999999999999887 677776655555678999999
Q ss_pred HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHH
Q 018665 223 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 302 (352)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (352)
++.+++... ..+++++++++++++++++.+.|+++ |+.+..+..++++|+++++. +..++.+.|+
T Consensus 318 a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ll 382 (432)
T 3ei9_A 318 GALACLTPE--GLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHFPNQ------------SSWDVFAEIL 382 (432)
T ss_dssp HHHHHSSHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECSSSSEEEEECTTS------------CHHHHHHHHH
T ss_pred HHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEEECCCC------------CHHHHHHHHH
Confidence 988888641 13678889999999999999999988 88888778888999999843 7888889888
Q ss_pred HccCEEeccCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 303 DKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 303 ~~~gi~i~~g~~~~~--~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
+++||.+.||..|+. ++++||++..+++++++++++|++-.+..
T Consensus 383 ~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~~~~ 428 (432)
T 3ei9_A 383 EKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYKHH 428 (432)
T ss_dssp HHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTS
T ss_pred HHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHhhhc
Confidence 777999999998874 68999999889999999999999876543
No 51
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=8.4e-42 Score=314.92 Aligned_cols=315 Identities=14% Similarity=0.161 Sum_probs=258.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHH--HHHHHHhcCC------------CCEEEecCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSI--LQAVLAVCSP------------GDEVIIPAP 68 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~--~~~~~~l~~~------------~~~vl~~~~ 68 (352)
.|+++.|..++| +++|++++ +++++|++|+|+++++ ..++.++..+ +++|++++|
T Consensus 71 ~Y~~~~G~~~lr------~~ia~~~~-----~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p 139 (422)
T 3d6k_A 71 NYGGLLGIADIR------ELWAEALG-----LPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVP 139 (422)
T ss_dssp SSCCSSCCHHHH------HHHHHHHT-----CCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEES
T ss_pred CCCCCCCCHHHH------HHHHHHhC-----CChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCC
Confidence 588888999999 99999996 7789999999999987 6666777654 347999999
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC-CeeEEE-EcCCCCCcccCCCHHHHHHHHHHHH-hCCCEE
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVA-KHPRLL 145 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~-i~~p~nptG~~~~~~~l~~l~~~~~-~~~~~~ 145 (352)
+|..+...++..|.+++.++++.+ ++|+++|++.+++ ++++++ +++||||||.++|.+++++|+++|+ ++ |++
T Consensus 140 ~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~-~~~ 215 (422)
T 3d6k_A 140 GYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAP-DFR 215 (422)
T ss_dssp CCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST-TCE
T ss_pred ccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhcc-CCE
Confidence 999999999999999999998743 3899999999975 788888 6899999999999999999999999 99 999
Q ss_pred EEecccccc--cccCCCCccccccC---CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHH
Q 018665 146 VLSDEIYEH--IIYAPATHTSFASL---PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSIS 220 (352)
Q Consensus 146 livD~~~~~--~~~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (352)
+|+||+|+. +.+++....++..+ ....++++++.|+||. +++|+|+||+++++++++.+......++++++.+.
T Consensus 216 li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l~~~l~~~~~~~~~~~~~~~ 294 (422)
T 3d6k_A 216 IVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKENIEWYASHANVRGIGPNKLN 294 (422)
T ss_dssp EEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHH
T ss_pred EEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHHHHHHHHHHHHhhcCCCCHHH
Confidence 999999985 43333223344221 1235789999999999 56999999999999999999887777777899999
Q ss_pred HHHHHHHhcc-cCCChHHHHHHHHHHHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCCChH
Q 018665 221 QKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 295 (352)
Q Consensus 221 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (352)
|.++.++++. +.. .+++++.++.++++++.+.+.|++ ++++.+..|++|+++|+++++. +..
T Consensus 295 q~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~------------~~~ 361 (422)
T 3d6k_A 295 QLAHAQFFGDVAGL-KAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG------------TAS 361 (422)
T ss_dssp HHHHHHHHCSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT------------CHH
T ss_pred HHHHHHHHhCcchH-HHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC------------CHH
Confidence 9999999985 211 366778888888888888887764 3346777888999999999753 466
Q ss_pred HHHHHHHHccCEEeccC-CCCC-----CCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 296 SLCRYLLDKAQVALVPG-DAFG-----DDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 296 ~~~~~l~~~~gi~i~~g-~~~~-----~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+.+.|.+ .||.+.|| ..|. .++++||+++. +++++++++++|+++++++.
T Consensus 362 ~~~~~l~~-~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 419 (422)
T 3d6k_A 362 RVVELAKE-AGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLMAA 419 (422)
T ss_dssp HHHHHHHH-TTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 77776665 59999994 4452 35799999995 99999999999999987653
No 52
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=4.1e-42 Score=313.53 Aligned_cols=311 Identities=12% Similarity=0.110 Sum_probs=250.2
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCc--EEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQ--ILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEM 76 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~--i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~ 76 (352)
..|++..|.+++| +++++++. +.+..+++++ +++|+|+++|+..++.++.+ + |+|++++|+|..|...
T Consensus 66 ~~Y~~~~G~~~lr------~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~ 138 (405)
T 3k7y_A 66 KPYLLGNGTEDFS------TLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNM 138 (405)
T ss_dssp CCCCTTSSCHHHH------HHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHH
T ss_pred CCCCCCCCcHHHH------HHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHH
Confidence 3599999999999 99999998 6666666664 69999999999999999877 8 9999999999999999
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhccC--CeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
++..|.+++.+++..++++.+|++.+++.+++ +++++++++| |||||.+++.+++++|+++|+++ |+++|+||+|.
T Consensus 139 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~-~~~vi~De~Y~ 217 (405)
T 3k7y_A 139 IESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHK-KHVIIFDIAYQ 217 (405)
T ss_dssp HHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-CCEEEEEESCT
T ss_pred HHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CeEEEEecCcc
Confidence 99999999999985445688999999999863 5577777665 89999999999999999999999 99999999999
Q ss_pred ccccCCCC--ccccccCCCCCCceEEEeccccccccccceeEEEEc---ChhHHHHHH----hhhhccccCCChHHHHHH
Q 018665 154 HIIYAPAT--HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACN----KIQSQFTSGASSISQKAG 224 (352)
Q Consensus 154 ~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 224 (352)
++.+++.. ..++..+....++++++.|+||.+|++|+|+||+++ ++++++.+. ........+++.+.|.++
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~ 297 (405)
T 3k7y_A 218 GFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRIL 297 (405)
T ss_dssp TTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred cccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHH
Confidence 98775321 122333222357899999999999999999999863 666665543 222333345678889888
Q ss_pred HHHhcccCCCh---HHHHHHHHHHHHHHHHHHHHhc----ccC---CceecCCCCceEEEeecCCccCCcccCCCCCCCh
Q 018665 225 VAALGLGYAGG---EVVSKMVKAFRERRDFLVKSFG----ELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 294 (352)
Q Consensus 225 ~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~----~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
..++....... +.+++.++.++++++.+.+.|+ ++. ++.+..+++|+|+|+.++.
T Consensus 298 ~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~--------------- 362 (405)
T 3k7y_A 298 CQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA--------------- 362 (405)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG---------------
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH---------------
Confidence 88887621112 3355666779999999999998 762 2788899999999988753
Q ss_pred HHHHHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhh
Q 018665 295 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~ 345 (352)
+++++| +++||.+.||+ |||++. +++++++++++|++++++
T Consensus 363 -~~~~~L-~~~gV~v~p~~--------Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 363 -KIAEHL-KTHHIYIINNG--------RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp -GGTTTT-TTTTEECCTTS--------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred -HHHHHH-HHCCEeecCCC--------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 223566 56799999964 999987 889999999999999875
No 53
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=3.5e-41 Score=310.45 Aligned_cols=315 Identities=16% Similarity=0.218 Sum_probs=259.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..|..++| +.+++++. ..+.+ .+++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|
T Consensus 75 ~y~~~~g~~~lr------~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g 147 (418)
T 3rq1_A 75 GYAPIAGIPDFL------CAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTG 147 (418)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTT
T ss_pred CCCCCCChHHHH------HHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcC
Confidence 588889999999 99999997 44432 23499999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccC----Cee-EEEEcCC-CCCcccCCCHHHHHHHHHHHH------hCCCEEEEec
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTE----KSR-LLILCSP-SNPTGSVYPKNLLDEIARIVA------KHPRLLVLSD 149 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~----~~~-~i~i~~p-~nptG~~~~~~~l~~l~~~~~------~~~~~~livD 149 (352)
.+++.++++.++ +.+|++.|++.+++ +++ ++++++| |||||.++|.+++++|+++|+ ++ |+++|+|
T Consensus 148 ~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~D 225 (418)
T 3rq1_A 148 RTLVTYSLFDEH-NNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRN-NVIIGID 225 (418)
T ss_dssp CEEEEECSBCTT-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSC-EEEEEEE
T ss_pred CEEEEEeeeCCC-CCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCC-CeEEEEe
Confidence 999999986433 67899999999874 555 7888999 999999999999999999999 89 9999999
Q ss_pred ccccccccCCCCcccccc-CCCCCCc--eEEEeccccccccccceeEEEEc---ChhHHHHHHhhhhcc----ccCCChH
Q 018665 150 EIYEHIIYAPATHTSFAS-LPGMWER--TLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNKIQSQF----TSGASSI 219 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~-~~~~~~~--~i~~~s~sK~~g~~g~~~g~l~~---~~~~~~~~~~~~~~~----~~~~~~~ 219 (352)
|+|.++.+++....++.. .....++ ++++.|+||.+|++|+|+||+++ ++++++.+....... ..+++.+
T Consensus 226 e~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (418)
T 3rq1_A 226 VAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRP 305 (418)
T ss_dssp CTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHH
T ss_pred cccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchH
Confidence 999988766543333332 2222344 58899999999999999999998 899998887654322 2358889
Q ss_pred HHHHHHHHhcccCC---ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHH
Q 018665 220 SQKAGVAALGLGYA---GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 220 ~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
.+.++.++++.... ..+..+++++.++++++.+.+.|+++ |+.+..+++++++|++++ +..+
T Consensus 306 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--------------~~~~ 370 (418)
T 3rq1_A 306 AMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPYRGGFFITIPTD--------------SANA 370 (418)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCSSSEEEEECT--------------THHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCceEEEEcCCC--------------CHHH
Confidence 99999999876210 01233466778899999999999988 899988999999998764 6778
Q ss_pred HHHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 297 LCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.+.|.+ +||.+.|| ++++||+++. +++++++++++|+++++++.
T Consensus 371 ~~~~l~~-~gi~v~~g-----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 371 ICEELKK-EHIYVIAL-----ANGIRIAACGIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp HHHHHHH-TTEECEEC-----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred HHHHHHh-CCEEEecC-----CCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 8887765 59999997 5689999986 99999999999999998765
No 54
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=9.2e-42 Score=312.54 Aligned_cols=313 Identities=27% Similarity=0.414 Sum_probs=250.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++.|..++| +++++++. +|+ +++++|++++|+++++..+.. ++++||+|+++.|+|.++...++..|.
T Consensus 70 ~y~~~~g~~~lr------~~la~~l~-~g~-~~~~~v~~~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~ 140 (400)
T 3asa_A 70 GYGPDFGLPALR------QKLSEDFY-RGF-VDAKEIFISDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGA 140 (400)
T ss_dssp CCCCTTCCHHHH------HHHHHTTS-TTS-SCGGGEEEESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTC
T ss_pred CCCCCCCCHHHH------HHHHHHHH-cCC-CCHHHEEEccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCC
Confidence 477788999999 99999964 444 578899999999999998654 457889999999999999999999999
Q ss_pred e-EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 83 T-PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 83 ~-v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+ ++.++++.++++..|+++ + +++++|++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++..
T Consensus 141 ~~~~~~~~~~~~~~~~~l~~----~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~ 214 (400)
T 3asa_A 141 KEIIALPCLQENAFFPEFPE----D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEH-EILILFDAAYSTFISDPSL 214 (400)
T ss_dssp SEEEEEECCGGGTTCCCCCT----T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTGGGCCCTTS
T ss_pred cceEecccchhcCcccChhh----c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEEchhhhhhcCCCC
Confidence 9 999998754444444332 1 5788999999999999999999999999999999 9999999999988776544
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhH-------HHHHHhhhhccc-cCCChHHHHHHHHHhcccCC
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-------VAACNKIQSQFT-SGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 233 (352)
..++..+....++++++.|+||.+|++|+|+||+++++++ ++.+........ .++|.+.+.++.++++..
T Consensus 215 ~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-- 292 (400)
T 3asa_A 215 PKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-- 292 (400)
T ss_dssp CSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT--
T ss_pred CCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH--
Confidence 4455554432467899999999999999999999999888 666643322222 368999999999998752
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEee-cCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID-FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
++++.++.++++++.+.+.|+++ |+.+..+.+++++|++ ++... ++.++.+.|++++||.+.||
T Consensus 293 ---~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gv~v~~g 357 (400)
T 3asa_A 293 ---PQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKPTQANI-----------SDRDLFDFFLREYHIAITPG 357 (400)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEECCCTTC-----------CTTTHHHHHHHHHSEECEEG
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEeccCCCC-----------CHHHHHHHHHHhCCEEEeCh
Confidence 56677888999999999999987 8888877788889999 77532 55678888886679999999
Q ss_pred CCCC--CCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 313 DAFG--DDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 313 ~~~~--~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
..|+ .++++||++..+++++++++++|++++++..
T Consensus 358 ~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 358 IGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQS 394 (400)
T ss_dssp GGGCGGGTTCEEEECCSCHHHHHHHHHHHHC------
T ss_pred hHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHhhh
Confidence 8875 3578999976699999999999999987654
No 55
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=7.3e-41 Score=307.87 Aligned_cols=312 Identities=15% Similarity=0.215 Sum_probs=257.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..|..++| +.+++++. ..+.. .+++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|
T Consensus 74 ~Y~~~~g~~~lr------~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g 146 (413)
T 3t18_A 74 SYAPIEGEKDYR------KIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFG 146 (413)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHT
T ss_pred CcCCCCCCHHHH------HHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhC
Confidence 588888999999 99999987 44432 45599999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccC----Cee-EEEEcCC-CCCcccCCCHHHHHHHHHHHH------hCCCEEEEec
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTE----KSR-LLILCSP-SNPTGSVYPKNLLDEIARIVA------KHPRLLVLSD 149 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~----~~~-~i~i~~p-~nptG~~~~~~~l~~l~~~~~------~~~~~~livD 149 (352)
.+++.+++..++ +.+|++.|++++++ +++ ++++++| |||||.++|.+++++|+++|+ ++ |+++|+|
T Consensus 147 ~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~D 224 (413)
T 3t18_A 147 RNFKTFEFFTDD-FAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDK-KITLIVD 224 (413)
T ss_dssp CEEEEECCBCTT-SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTC-EEEEEEE
T ss_pred CeEEEeeccCCC-CCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCC-cEEEEEe
Confidence 999999985433 67999999999875 566 7788999 999999999999999999999 89 9999999
Q ss_pred ccccccccCCCCccccccC-CCCCCc--eEEEeccccccccccceeEEEEc---ChhHHHHHHhhhhcc----ccCCChH
Q 018665 150 EIYEHIIYAPATHTSFASL-PGMWER--TLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNKIQSQF----TSGASSI 219 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~~~s~sK~~g~~g~~~g~l~~---~~~~~~~~~~~~~~~----~~~~~~~ 219 (352)
|+|.++.+++....++... ....++ +++++|+||.+|++|+|+||+++ ++++++.+....... ...++.+
T Consensus 225 e~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (413)
T 3t18_A 225 VAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHA 304 (413)
T ss_dssp CTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHH
T ss_pred cccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChH
Confidence 9999998877644444332 222334 48899999999999999999998 899999887654322 1357888
Q ss_pred HHHHHHHHhcccCC--ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHH
Q 018665 220 SQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESL 297 (352)
Q Consensus 220 ~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
.+.++.++++.... ..+..+++++.++++++.+.+.|+++ |+.+..+++++++|+++. +..++
T Consensus 305 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~--------------~~~~~ 369 (413)
T 3t18_A 305 AQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFGGFFTFIPTD--------------KAFDI 369 (413)
T ss_dssp HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSSSCEEEECS--------------CHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCceEEEEeCCC--------------CHHHH
Confidence 99988888875210 02345567788999999999999988 899998999999988763 67888
Q ss_pred HHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 298 CRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 298 ~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+.|.+ +||.+.|| ++++||+++. +++++ +++|++++++++
T Consensus 370 ~~~l~~-~gv~v~~g-----~~~iRis~~~~~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 370 VKDLEK-ENIFTIPS-----AKGIRVAICGVGEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp HHHHHH-TTEECEEC-----SSEEEECTTTSCGGGH---HHHHHHHHHHHH
T ss_pred HHHHHh-CCEEEecC-----CCceEEEEeeCCHHHH---HHHHHHHHHHHh
Confidence 888765 59999996 6789999987 66666 888888887664
No 56
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=5.6e-40 Score=296.56 Aligned_cols=298 Identities=17% Similarity=0.242 Sum_probs=256.1
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
++.+..++| +.++++++ +++++|++++|+++++..++.++ |+|+++.|+|.++...++..|.+++
T Consensus 59 ~~~~~~~l~------~~la~~~~-----~~~~~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~ 123 (361)
T 3ftb_A 59 PDVNYRRLN------KSIENYLK-----LKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVV 123 (361)
T ss_dssp CCTTCHHHH------HHHHHHHT-----CCSCEEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEE
T ss_pred CCccHHHHH------HHHHHHhC-----CCcceEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEE
Confidence 567889999 99999996 67899999999999999999888 8999999999999999999999999
Q ss_pred EecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 86 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.++++.+.+ .+++++++++++ ++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.++ ...+.
T Consensus 124 ~~~~~~~~~--~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~--~~~~~ 197 (361)
T 3ftb_A 124 FSYLDENMC--IDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEK-KKTIIIDEAFIEFTGD--PSSSF 197 (361)
T ss_dssp EEECCTTSC--CCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHH-TCEEEEECSSGGGTCC--TTSSS
T ss_pred EeecCcccC--CCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhc-CCEEEEECcchhhcCC--cccch
Confidence 999875444 678999999987 99999999999999999999999999999999 9999999999988775 22344
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEE-cChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
.......++++++.|+||.+|++|+|+||++ .++++++.+...... +++|++.+.++.++++. .+++++.+++
T Consensus 198 ~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~----~~~~~~~~~~ 271 (361)
T 3ftb_A 198 VGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP--WNINCFAEMAAINCLKD----TNYIEESLLW 271 (361)
T ss_dssp GGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCT--TCSCHHHHHHHHHTSSC----HHHHHHHHHH
T ss_pred hHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCC--CCCCHHHHHHHHHHhcC----HHHHHHHHHH
Confidence 4444446788999999999999999999998 899999998876543 46999999999999985 6888999999
Q ss_pred HHHHHHHHHHHhcccCCce-ecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CCeE
Q 018665 245 FRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCI 321 (352)
Q Consensus 245 ~~~~~~~l~~~l~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~~i 321 (352)
++++++.+.+.|++++++. +..+. |.++++++++. +..++.+.|.++ ||.+.+|..|+. ++++
T Consensus 272 ~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~------------~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~i 337 (361)
T 3ftb_A 272 IKKERKRFIEELNKIGFIKRVFSPH-ANFVLCRLENI------------SGEKLYDSLLKE-DIVIRRCCNFIGLDDSFV 337 (361)
T ss_dssp HHHHHHHHHHHHHHSSSEEEEECCS-SSEEEEEESSS------------CHHHHHHHHHTT-TEECEECTTSTTCCTTEE
T ss_pred HHHHHHHHHHHHHhCCCCceecCCC-CeEEEEEcCCC------------CHHHHHHHHHHC-CeEEeeCccCCCCCCCEE
Confidence 9999999999999988888 66555 45577888763 788999999876 999999988754 5799
Q ss_pred EEEeecCHHHHHHHHHHHHHHHhh
Q 018665 322 RISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
|++++ +.++++++++.|+++.+.
T Consensus 338 Ris~~-~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 338 RFAIK-DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp EEECC-CHHHHHHHHHHHHHHHHT
T ss_pred EEEcC-CHHHHHHHHHHHHHHHhc
Confidence 99998 556777777777776653
No 57
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=3.6e-40 Score=298.26 Aligned_cols=303 Identities=18% Similarity=0.249 Sum_probs=250.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.| ++.+..++| +.++++++ +++++|++++|+++++..++.++ ++|+|+++.|+|.++...++..|.
T Consensus 55 ~y-~~~~~~~l~------~~la~~~~-----~~~~~v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~ 120 (364)
T 1lc5_A 55 RY-PDADYFHLH------QALARHHQ-----VPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSGC 120 (364)
T ss_dssp SC-CCTTCHHHH------HHHHHHHT-----SCGGGEEEESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTC
T ss_pred cC-CCCCHHHHH------HHHHHHHC-----cCHHHEEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCC
Confidence 46 446789999 99999996 66789999999999999999998 579999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++.++++.+ ++++.+.++++++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++
T Consensus 121 ~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~--- 195 (364)
T 1lc5_A 121 EIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSL-NINLILDEAFIDFIPHE--- 195 (364)
T ss_dssp EEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGSTTC---
T ss_pred eEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhc-CcEEEEECcChhhccCc---
Confidence 999999875334333 5666666767889999999999999999999999999999999 99999999999877643
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEE-cChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.++.......++++++.|+||.+|++|+|+||++ +++++++.+..... ++++|++.+.++.++++. .+++++.
T Consensus 196 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~----~~~~~~~ 269 (364)
T 1lc5_A 196 TGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQM--PWSVNALAALAGEVALQD----SAWQQAT 269 (364)
T ss_dssp CCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSC--TTCSCHHHHHHHHHGGGC----HHHHHHH
T ss_pred cchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCC--CCCCCHHHHHHHHHHHhC----cHHHHHH
Confidence 2222222335788999999999998999999999 99999998877654 456899999999999986 5788899
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DT 319 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~ 319 (352)
++.++++++.+.+.|+++|++.+.. ..|.++|+++++ +..++.+.|.++ ||.+.+|..|.. ++
T Consensus 270 ~~~~~~~~~~l~~~L~~~~~~~~~~-~~g~~~~~~~~~-------------~~~~l~~~l~~~-gi~v~~g~~~~~~~~~ 334 (364)
T 1lc5_A 270 WHWLREEGARFYQALCQLPLLTVYP-GRANYLLLRCER-------------EDIDLQRRLLTQ-RILIRSCANYPGLDSR 334 (364)
T ss_dssp HHHHHHHHHHHHHHHHTSTTEEECC-CSSSEEEEEESC-------------TTCCHHHHHHTT-TEECEECTTSTTCCTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCEECC-CCCeEEEEECCC-------------cHHHHHHHHHHC-CcEEeeCcccCCCCCC
Confidence 9999999999999999888888765 455667888763 344677888865 999999987753 57
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 320 CIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
++||+++. .++++++++.|+++++++
T Consensus 335 ~iRis~~~-~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 335 YYRVAIRS-AAQNERLLAALRNVLTGI 360 (364)
T ss_dssp EEEEECCC-HHHHHHHHHHHHHHC---
T ss_pred EEEEEeCC-HHHHHHHHHHHHHHhhcc
Confidence 99999874 678899999999887765
No 58
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=8.5e-41 Score=308.38 Aligned_cols=316 Identities=14% Similarity=0.183 Sum_probs=261.6
Q ss_pred Ccc-CCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHH--HHHHHhcC--C---------CCEEEecC
Q 018665 2 QFV-RVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSIL--QAVLAVCS--P---------GDEVIIPA 67 (352)
Q Consensus 2 ~~y-~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~--~~~~~l~~--~---------~~~vl~~~ 67 (352)
..| +++.|..++| +.+|++++ +++++|++|+|+++++. .++.++++ + +|+|+++.
T Consensus 63 ~~Yp~~~~g~~~lr------~~ia~~~~-----~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~ 131 (423)
T 3ez1_A 63 RNYPGGVAGLPSAR------ALFAGYLD-----VKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTV 131 (423)
T ss_dssp TSSCSCTTCCHHHH------HHHHHHTT-----SCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEE
T ss_pred hCCCCCCCChHHHH------HHHHHHhC-----CChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcC
Confidence 457 8889999999 99999996 77899999999999997 88888877 6 59999999
Q ss_pred CCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc--cCCeeEEEE-cCCCCCcccCCCHHHHHHHHHHH-HhCCC
Q 018665 68 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKSRLLIL-CSPSNPTGSVYPKNLLDEIARIV-AKHPR 143 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l--~~~~~~i~i-~~p~nptG~~~~~~~l~~l~~~~-~~~~~ 143 (352)
|+|..+...++..|.+++.++++.+ ++|+++|++++ ++++++|++ ++||||||.++|.+++++|+++| +++ |
T Consensus 132 p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~-~ 207 (423)
T 3ez1_A 132 PGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAP-D 207 (423)
T ss_dssp SCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSST-T
T ss_pred CCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhcc-C
Confidence 9999999999999999999998753 48999999999 568888875 58899999999999999999999 999 9
Q ss_pred EEEEecccccccccCC-C--CccccccC---CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCC
Q 018665 144 LLVLSDEIYEHIIYAP-A--THTSFASL---PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGAS 217 (352)
Q Consensus 144 ~~livD~~~~~~~~~~-~--~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 217 (352)
+++|+||+|+.+.+.+ . ...++..+ ....++++++.|+||. +++|+|+||+++++++++.+.......+.+++
T Consensus 208 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 286 (423)
T 3ez1_A 208 FTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGFVASSEDNIRWLSKYLGAQSIGPN 286 (423)
T ss_dssp CEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEEEEECHHHHHHHHHHHHHSCSCCC
T ss_pred CEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEEEEeCHHHHHHHHHHHhhhccCCC
Confidence 9999999999655543 1 22233332 1235789999999999 45999999999999999999888777778899
Q ss_pred hHHHHHHHHHhcc--cCCChHHHHHHHHHHHHHHHHHHHHhcc----cC-CceecCCCCceEEEeecCCccCCcccCCCC
Q 018665 218 SISQKAGVAALGL--GYAGGEVVSKMVKAFRERRDFLVKSFGE----LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGK 290 (352)
Q Consensus 218 ~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 290 (352)
++.+.++.++++. ... .+++++.++.++++++.+.+.|.+ ++ ++.+..+.+|+++|+++++.
T Consensus 287 ~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~---------- 355 (423)
T 3ez1_A 287 KVEQARHVKFLTEYPGGL-EGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP---------- 355 (423)
T ss_dssp HHHHHHHHHHHHHSTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS----------
T ss_pred HHHHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC----------
Confidence 9999999999885 222 456677777777777777666654 42 37777888999999999864
Q ss_pred CCChHHHHHHHHHccCEEecc-CCCCC-----CCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 291 IENSESLCRYLLDKAQVALVP-GDAFG-----DDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 291 ~~~~~~~~~~l~~~~gi~i~~-g~~~~-----~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
+...+.+.|.++ ||.+.| |..|. .++++||+++. +++++++++++|+++++++.
T Consensus 356 --~~~~~~~~l~~~-gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 356 --VADRVVKLAEAA-GVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp --CHHHHHHHHHHT-TEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred --cHHHHHHHHHHC-CcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 677788777754 999999 55554 25799999987 99999999999999998654
No 59
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.2e-40 Score=306.72 Aligned_cols=318 Identities=19% Similarity=0.315 Sum_probs=255.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC-----EEEec-CCCCCChHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD-----EVIIP-APFWVSYPE 75 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~-----~vl~~-~~~~~~~~~ 75 (352)
.|+++.|..++| +.+|+++. ++|+.+++++|++|+|++++++.++.+++++|| +|+++ .|+|..+..
T Consensus 70 ~y~~~~g~~~lr------~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~ 143 (417)
T 3g7q_A 70 NYDGPQGKTALL------NALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYAD 143 (417)
T ss_dssp STTCTTSHHHHH------HHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC
T ss_pred ccCCCCCcHHHH------HHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchh
Confidence 588899999999 99999998 889889999999999999999999999998877 89997 999998876
Q ss_pred HHHh------cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 76 MARI------ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 76 ~~~~------~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
.+.. .+..+..++.+ ..++.+|++.|+ ++++++++++++||||||.++|.+++++|+++|+++ |+++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~-~~~li~D 219 (417)
T 3g7q_A 144 SGLEDDLFVSARPNIELLPEG-QFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQH-NIPLVID 219 (417)
T ss_dssp -----CCEEECCCEEEEEGGG-EEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCCEEEE
T ss_pred hccchhhhccccCcccccCCc-ccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHc-CCEEEEe
Confidence 6532 23444444432 124568999988 677899999999999999999999999999999999 9999999
Q ss_pred ccccccccCCCCccccccC-CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHh
Q 018665 150 EIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAAL 228 (352)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 228 (352)
|+|+.+.. + ..+... +...++++++.|+|| ++++|+|+||+++++++++.+......++.+++++.+.++.+++
T Consensus 220 e~~~~~~~-~---~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 294 (417)
T 3g7q_A 220 NAYGVPFP-G---IIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMI 294 (417)
T ss_dssp CTTCTTTT-C---CBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHH
T ss_pred CCCccccc-c---ccccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHH
Confidence 99975321 1 111111 122578899999999 57799999999999999999988877777889999999999999
Q ss_pred cccCCChHHHHH-HHHHHHHHHHHHHHHhcc-cC--CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 229 GLGYAGGEVVSK-MVKAFRERRDFLVKSFGE-LE--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 229 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~-~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
+.... .....+ +++.++++++.+.+.|++ ++ ++.+..+.+|+++|++++... .+..++.+.|.++
T Consensus 295 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~l~~~l~~~ 363 (417)
T 3g7q_A 295 KRNDL-LRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLP----------ITTELLYQRLKAR 363 (417)
T ss_dssp HTTCH-HHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCS----------SCHHHHHHHHHHT
T ss_pred cCcch-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCC----------CCHHHHHHHHHHC
Confidence 86432 233333 667788888888888776 34 477888899999999998621 1788999988754
Q ss_pred cCEEeccCCCCCC---------CCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 305 AQVALVPGDAFGD---------DTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 305 ~gi~i~~g~~~~~---------~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
||.+.||..|+. ++++||+++.+++++++++++|+++++++.
T Consensus 364 -gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~~ 414 (417)
T 3g7q_A 364 -GVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERAW 414 (417)
T ss_dssp -TEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CEEEECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 999999988754 469999999999999999999999998764
No 60
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=9.4e-41 Score=315.56 Aligned_cols=331 Identities=21% Similarity=0.279 Sum_probs=265.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-h-cC-CCCC-CCcEEEeCChHHHHHHHHHH-----hcCCCCEEEecCCCCCCh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-E-NG-LSYT-PDQILVSNGAKQSILQAVLA-----VCSPGDEVIIPAPFWVSY 73 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~-~~-~~~~-~~~i~~~~g~~~a~~~~~~~-----l~~~~~~vl~~~~~~~~~ 73 (352)
||.+..|..++| +.+++++. + .+ +.+. +++|++|+|+++++..++.+ ++++||+|+++.|+|.++
T Consensus 133 y~~~~~g~~~lr------~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~ 206 (533)
T 3f6t_A 133 YPVPDRCLVNTE------KIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPY 206 (533)
T ss_dssp CCSSSSCCHHHH------HHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHH
T ss_pred CCCCcccHHHHH------HHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHH
Confidence 455888999999 99999998 4 34 4544 47999999999999999998 788999999999999999
Q ss_pred HHHHHhcCCeEEEecccC--CCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHH-hCCCEEEEecc
Q 018665 74 PEMARIADATPVILPTRI--SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVA-KHPRLLVLSDE 150 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~~~~--~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~-~~~~~~livD~ 150 (352)
...++..|.+++.++++. +.++.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+ ++ |+++|+||
T Consensus 207 ~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~-~~~li~De 285 (533)
T 3f6t_A 207 LRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNP-KLMIISDE 285 (533)
T ss_dssp HTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCT-TCEEEEEC
T ss_pred HHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCC-CCEEEEcC
Confidence 999999999999999875 566889999999999999999999999999999999999999999999 69 99999999
Q ss_pred cccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh-----HHHH---------------------
Q 018665 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-----FVAA--------------------- 204 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-----~~~~--------------------- 204 (352)
+|+++.++. .++.... .++++++.|+||.+|++|+|+||++++++ +++.
T Consensus 286 ~y~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~ 360 (533)
T 3f6t_A 286 VYGAFVPNF---KSIYSVV--PYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPD 360 (533)
T ss_dssp TTGGGSTTC---CCHHHHS--GGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGG
T ss_pred CccccccCc---cCHhhcC--CCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcc
Confidence 999876542 3333322 37889999999999999999999998776 3322
Q ss_pred -----------HHhhhhccccCCChHHHHH----HHHHhccc---CCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC
Q 018665 205 -----------CNKIQSQFTSGASSISQKA----GVAALGLG---YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 266 (352)
Q Consensus 205 -----------~~~~~~~~~~~~~~~~~~~----~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 266 (352)
+.......+.+++.+.|.+ +..++... .....+++++++.++++++.+.+.|. + ++.+..
T Consensus 361 ~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~~ 438 (533)
T 3f6t_A 361 KMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A-PKDETD 438 (533)
T ss_dssp GCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCST
T ss_pred hhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C-CccccC
Confidence 2333444556788888887 44555310 01257889999999999999999998 6 788888
Q ss_pred CCCceEEEeecCCccCCcccC----CC-CCCChHHHHHHHHHccCEEeccCCCCCC-CCeEEEEeec-CHHHHHHHHHHH
Q 018665 267 PQGAFYLFIDFSTYYGSEAEG----FG-KIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAA-SLTTLQAAVERI 339 (352)
Q Consensus 267 ~~~g~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~l~~~~gi~i~~g~~~~~-~~~iRi~~~~-~~~~l~~~~~~l 339 (352)
+.+++|+|++++......... +. ...++.+++.++++++||.+.||+.|+. ++++|+|++. +++++++++++|
T Consensus 439 ~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L 518 (533)
T 3f6t_A 439 TNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQV 518 (533)
T ss_dssp TBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHH
T ss_pred CCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHH
Confidence 899999999886411000000 00 0005667777888777999999998875 5799999996 999999999999
Q ss_pred HHHHhhhC
Q 018665 340 KKGLLTLR 347 (352)
Q Consensus 340 ~~~~~~~~ 347 (352)
+++++++.
T Consensus 519 ~~~l~~~~ 526 (533)
T 3f6t_A 519 LELLKEYY 526 (533)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 61
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=3e-40 Score=306.64 Aligned_cols=323 Identities=17% Similarity=0.243 Sum_probs=262.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--------------EEEec-
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD--------------EVIIP- 66 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~--------------~vl~~- 66 (352)
.|++..|..++| +.+|+++. ++|+.+++++|++|+|++++++.++.+++++|| +|+++
T Consensus 78 ~y~~~~g~~~lr------~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~ 151 (444)
T 3if2_A 78 NYSNPQGDSAFI------DALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPL 151 (444)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESS
T ss_pred ccCCCCCCHHHH------HHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeC
Confidence 478888999999 99999998 889889999999999999999999999988887 78876
Q ss_pred CCCCCChHH------HHHhcCCeEEEecccCCC---CcccCHHHHHhh---ccCCeeEEEEcCCCCCcccCCCHHHHHHH
Q 018665 67 APFWVSYPE------MARIADATPVILPTRISE---NFLLDPKVLESK---LTEKSRLLILCSPSNPTGSVYPKNLLDEI 134 (352)
Q Consensus 67 ~~~~~~~~~------~~~~~g~~v~~i~~~~~~---~~~~d~~~l~~~---l~~~~~~i~i~~p~nptG~~~~~~~l~~l 134 (352)
.|+|..+.. .+...|..++.++++.++ ++.+|++.|+++ +++++++|++++|+||||.++|.+++++|
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 231 (444)
T 3if2_A 152 TPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHL 231 (444)
T ss_dssp SSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHH
Confidence 899998876 345678888888876421 357899999998 67789999999999999999999999999
Q ss_pred HHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcccc
Q 018665 135 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 214 (352)
Q Consensus 135 ~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~ 214 (352)
+++|+++ |+++|+||+|+.+.. +...... .....++++++.|+||. +++|+|+||+++++++++.+.......++
T Consensus 232 ~~~a~~~-~~~li~De~~~~~~~-~~~~~~~--~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~ 306 (444)
T 3if2_A 232 AEIAKRY-DIPLIIDNAYGMPFP-NIIYSDA--HLNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNL 306 (444)
T ss_dssp HHHHHHT-TCCEEEECTTCTTTT-CCBCSCC--CCCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHC-CCEEEEECCCCCccc-ccccccc--cccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccC
Confidence 9999999 999999999975321 1100111 11225788999999997 67999999999999999999887777777
Q ss_pred CCChHHHHHHHHHhcccCCChHHHHH-HHHHHHHHHHHHHHHhcc-cC--CceecCCCCceEEEeecCCccCCcccCCCC
Q 018665 215 GASSISQKAGVAALGLGYAGGEVVSK-MVKAFRERRDFLVKSFGE-LE--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGK 290 (352)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~-~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 290 (352)
+++++.+.++..+++.... .....+ +++.++++++.+.+.|.+ ++ ++.+..+.+|+++|+.++...
T Consensus 307 ~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~--------- 376 (444)
T 3if2_A 307 APTRFGAAIATPLVANDRI-KQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLP--------- 376 (444)
T ss_dssp SCCCHHHHHHHHHHHTSHH-HHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCS---------
T ss_pred CCChHHHHHHHHHHHcCch-hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCC---------
Confidence 8999999999999986322 222333 566777888888777765 34 467777888999999988521
Q ss_pred CCChHHHHHHHHHccCEEeccCCCCCCC----------CeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 291 IENSESLCRYLLDKAQVALVPGDAFGDD----------TCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 291 ~~~~~~~~~~l~~~~gi~i~~g~~~~~~----------~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+..++.+.|.++ ||.+.||+.|... +++||+++.+++++++++++|+++++++..
T Consensus 377 -~~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 377 -ISTLDLYERLKAK-GTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp -SCHHHHHHHHHHT-TEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHC-CeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHc
Confidence 1788899988755 9999999887532 589999999999999999999999987653
No 62
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=4.5e-39 Score=291.61 Aligned_cols=300 Identities=20% Similarity=0.302 Sum_probs=253.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..+ .++| +.+++++. ++|+.+++++|++++|+++++..++.++.++||+|+++.|+|.++...++..|
T Consensus 65 ~y~~~~~-~~l~------~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g 137 (369)
T 3cq5_A 65 RYPERDA-VELR------DELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTH 137 (369)
T ss_dssp SCCCTTC-HHHH------HHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHHHHHTT
T ss_pred cCCCccH-HHHH------HHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcC
Confidence 4654444 7899 99999998 77777788999999999999999999999999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
.+++.++.+ .++.+|++++++++++ ++++|++++|+||||.++| ++++.++|+.+ ++++|+||+|+++.+.
T Consensus 138 ~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---~~~l~~l~~~~-~~~li~De~~~~~~~~-- 209 (369)
T 3cq5_A 138 TEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTS---LDDVERIINVA-PGIVIVDEAYAEFSPS-- 209 (369)
T ss_dssp CEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC---HHHHHHHHHHC-SSEEEEECTTGGGCCS--
T ss_pred CEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCC---HHHHHHHHHhC-CCEEEEECCchhhcCC--
Confidence 999999965 4467899999999987 8899999999999999999 66777777788 8999999999987643
Q ss_pred CccccccCCCCCC-ceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 161 THTSFASLPGMWE-RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 161 ~~~~~~~~~~~~~-~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
.+........+ +++++.|+||.+|++|+|+||+++++++++.+...... +++|++.+.++.++++. .++++
T Consensus 210 --~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~----~~~~~ 281 (369)
T 3cq5_A 210 --PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLP--YHLSALSQAAAIVALRH----SADTL 281 (369)
T ss_dssp --CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCT--TCSCHHHHHHHHHHHHT----HHHHH
T ss_pred --cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCC--CCCCHHHHHHHHHHhcC----HHHHH
Confidence 23333322345 88999999999998999999999999999888776543 45899999999999985 56788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+.+++++++++.+.+.|++. |+.+.+ ..|.++|++++ . +..++.+.|.++ ||.+.+| +.++
T Consensus 282 ~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~-~------------~~~~l~~~l~~~-gi~v~~~---~~~~ 342 (369)
T 3cq5_A 282 GTVEKLSVERVRVAARLEEL-GYAVVP-SESNFVFFGDF-S------------DQHAAWQAFLDR-GVLIRDV---GIAG 342 (369)
T ss_dssp THHHHHHHHHHHHHHHHHHH-TCEEEC-CSSSEEEEECC-S------------SHHHHHHHHHHT-TEECBCC---SCTT
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCEECC-CCCeEEEEECC-C------------CHHHHHHHHHHC-CEEEEEC---CCCC
Confidence 88999999999999999885 888874 45667888876 2 678899988754 9999997 2468
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 320 CIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
++|++++ +++|++++++.|+++++.
T Consensus 343 ~iRis~~-~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 343 HLRTTIG-VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp EEEEECC-CHHHHHHHHHHHHHHHTT
T ss_pred eEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 9999998 789999999999998753
No 63
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.3e-39 Score=294.88 Aligned_cols=297 Identities=23% Similarity=0.369 Sum_probs=255.7
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCC-CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSY-TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 84 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v 84 (352)
++.+..++| +.++++++ . ++++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|.++
T Consensus 65 ~~~~~~~l~------~~la~~~g-----~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~ 133 (367)
T 3euc_A 65 PVPSSEALR------AKLKEVMQ-----VPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEF 133 (367)
T ss_dssp CCCCHHHHH------HHHHHHHT-----CCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEE
T ss_pred CCCcHHHHH------HHHHHHhC-----CCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeE
Confidence 346788999 99999996 4 67899999999999999999999999999999999999999999999999
Q ss_pred EEecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-CEEEEecccccccccCCCCc
Q 018665 85 VILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-RLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 85 ~~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~-~~~livD~~~~~~~~~~~~~ 162 (352)
+.++++. ++.+|+++|++++++ ++++|++++|+||||.++|.+++++|+++|++++ |+++|+||+|+++...+ .
T Consensus 134 ~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~ 209 (367)
T 3euc_A 134 VGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W 209 (367)
T ss_dssp EEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S
T ss_pred EEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h
Confidence 9999874 567899999999987 8999999999999999999999999999999873 59999999999865322 1
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
.+ .. ...++++++.|+||. +++|+|+||+++++++++.+..... .+++|++.+.++.++++. .+++++.+
T Consensus 210 ~~--~~-~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~----~~~~~~~~ 279 (367)
T 3euc_A 210 MS--RL-TDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRP--PYNVNVLTEATALFALEH----VAVLDEQA 279 (367)
T ss_dssp GG--GG-GTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHGGGCC--SSCCCHHHHHHHHHHHTT----HHHHHHHH
T ss_pred HH--HH-hhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHHHhCC--CCCCCHHHHHHHHHHhcC----HHHHHHHH
Confidence 11 11 235788999999999 8899999999999999998877654 356999999999999986 67789999
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC--CCCe
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DDTC 320 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~--~~~~ 320 (352)
++++++++++.+.|+++||+.+. +..++++|++++ +..++.+.|.+ .||.+.+|..|+ .+++
T Consensus 280 ~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~--------------~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~ 343 (367)
T 3euc_A 280 AQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP--------------DAAQTFDRLLA-RKVLIKNVSKMHPLLANC 343 (367)
T ss_dssp HHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS--------------CHHHHHHHHHT-TTEECEECGGGCGGGTTE
T ss_pred HHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--------------CHHHHHHHHHH-CCeEEEECCccCCCCCCE
Confidence 99999999999999998899854 556677888876 46788888765 499999988764 3689
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHh
Q 018665 321 IRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
+|++++ ++++++++++.|+++++
T Consensus 344 iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 344 LRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp EEEECC-CHHHHHHHHHHHHHHTC
T ss_pred EEEecC-CHHHHHHHHHHHHHHhc
Confidence 999988 78999999999998874
No 64
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.8e-40 Score=304.16 Aligned_cols=310 Identities=15% Similarity=0.114 Sum_probs=250.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEE--eCChHHHHHHHHHHhc---CCCCEEEecCCCCCChHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILV--SNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEM 76 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~--~~g~~~a~~~~~~~l~---~~~~~vl~~~~~~~~~~~~ 76 (352)
.|.+..|.+++| ++++++++ ++|+.+++++|++ |+|+++++..++..+. ++||+|+++.|+|..+...
T Consensus 66 ~Y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~ 139 (401)
T 7aat_A 66 EYLPIAGLADFT------RASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPI 139 (401)
T ss_dssp CCCCTTCCHHHH------HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHH
T ss_pred CCCCCCCCHHHH------HHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHH
Confidence 477888999999 99999999 7787777999987 9999999998887654 8899999999999999999
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
++..|.+++.++++...++.+|++.+++.++ ++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|.
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~Deay~ 218 (401)
T 7aat_A 140 FRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKR-NLLAYFDMAYQ 218 (401)
T ss_dssp HHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCT
T ss_pred HHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEccccc
Confidence 9999999999998755567899997666664 5788999999999999999999999999999999 99999999999
Q ss_pred ccccCCC--CccccccCCCCCCceEEEeccccccccccceeEEEEc---Chh----HHHHHHhhhhccccCCChHHHHHH
Q 018665 154 HIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAG 224 (352)
Q Consensus 154 ~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
++.+.+. ...++..+....++++++.|+||.+|++|+|+||+++ +++ +...+......+..+++...+.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (401)
T 7aat_A 219 GFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIA 298 (401)
T ss_dssp TTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred cccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHH
Confidence 8877542 1122222222357889999999999999999999886 555 445555555555666777888888
Q ss_pred HHHhcccCCC---hHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHH
Q 018665 225 VAALGLGYAG---GEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 225 ~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
..++..+... .+++++.+++++++++++.+.|+++ +++.+..+++++++|+.+ +.+.+
T Consensus 299 ~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~- 362 (401)
T 7aat_A 299 SLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGL---------------KPEQV- 362 (401)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCC---------------CHHHH-
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCC---------------CHHHH-
Confidence 7777652110 3457778889999999999999876 247777889999998764 33334
Q ss_pred HHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHH
Q 018665 299 RYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGL 343 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~ 343 (352)
..+++++||.+.++ +|++++. ++++++++++.|++++
T Consensus 363 ~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 363 ERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHHHh
Confidence 56665669999764 5999987 7777999999999876
No 65
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=5.5e-44 Score=326.46 Aligned_cols=315 Identities=24% Similarity=0.392 Sum_probs=269.3
Q ss_pred ChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 10 TLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
..++| +.+++++. .+|+++++++|++++|+++++..++.++.++||+|+++.|+|.++...++..|.+++.++
T Consensus 68 ~~~l~------~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~ 141 (392)
T 3b1d_A 68 SDELL------QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNS 141 (392)
Confidence 77888 99999998 778777889999999999999999999999999999999999999999999999999999
Q ss_pred ccCC-CCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 89 TRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 89 ~~~~-~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
++.+ +++.+|++++++.++ .+++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++.+++....++.
T Consensus 142 ~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~ 220 (392)
T 3b1d_A 142 LKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKH-HVILVSDEIHQDLTLFGHEHVSFN 220 (392)
Confidence 8533 346789999999997 6788999999999999999999999999999999 999999999999888765555665
Q ss_pred cCCCC-CCceEEEeccccccccccceeEEEEcCh-hHHHHHHhhhhccc-cCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 167 SLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFT-SGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 167 ~~~~~-~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
.+..+ .++++++.|+||.+|++|+|+||+++++ ++++.+......++ .+++++.+.++.++++. ..+++++.++
T Consensus 221 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~ 297 (392)
T 3b1d_A 221 TVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRY---GKPWLVALKA 297 (392)
Confidence 55432 5788999999999998999999999875 48888877665554 35688899988888875 2567888899
Q ss_pred HHHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC--CCCe
Q 018665 244 AFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DDTC 320 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~--~~~~ 320 (352)
.++++++.+.+.|++ +|++.+..+.+++++|++++... .+..++.+.|++++||.+.||..|+ .+++
T Consensus 298 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~ 367 (392)
T 3b1d_A 298 VLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYG----------LTDDALFTLLHDQAKVILNRGSDYGSEGELH 367 (392)
Confidence 999999999999988 78898888899998899887520 1566788888755699999998886 3579
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHh
Q 018665 321 IRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 321 iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
+||+++.+++++++++++|+++++
T Consensus 368 iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 368 ARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 999999988999999999998875
No 66
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.8e-40 Score=305.88 Aligned_cols=310 Identities=16% Similarity=0.149 Sum_probs=252.5
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEecCCCCCChHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD--QILVSNGAKQSILQAV--LAVCSPGDEVIIPAPFWVSYPEMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~--~i~~~~g~~~a~~~~~--~~l~~~~~~vl~~~~~~~~~~~~~ 77 (352)
.|++..|..++| +.+++++. ..+..++++ +|++|+|+++++..++ .+++++||+|++++|+|.++...+
T Consensus 87 ~Y~~~~g~~~lr------~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~ 160 (420)
T 4f4e_A 87 GYLPIDGIAAYD------ASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALF 160 (420)
T ss_dssp CCCCTTCCHHHH------HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHH
T ss_pred CCCCCCCcHHHH------HHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHH
Confidence 488889999999 99999998 444444677 8999999999999994 456789999999999999999999
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+..|.+++.++...+.++.+|++.+++.++ ++++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|++
T Consensus 161 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~y~~ 239 (420)
T 4f4e_A 161 DMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKAR-RLVPFLDIAYQG 239 (420)
T ss_dssp HHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTT
T ss_pred HHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CcEEEEcccccc
Confidence 999999999998544567899999999997 5788999999999999999999999999999999 999999999999
Q ss_pred cccCCC-CccccccCCCCCCceEEEeccccccccccceeEEEEc---ChhHHHHH----HhhhhccccCCChHHHHHHHH
Q 018665 155 IIYAPA-THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVAAC----NKIQSQFTSGASSISQKAGVA 226 (352)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 226 (352)
+.+++. ...++..+....++++++.|+||.+|++|+|+||+++ ++++++.+ .........+++.+.+.++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
T 4f4e_A 240 FGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAA 319 (420)
T ss_dssp SSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHH
T ss_pred ccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Confidence 887642 2334444433457899999999999999999999863 55655443 333333445678889988888
Q ss_pred HhcccCC---ChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 227 ALGLGYA---GGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 227 ~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
++..... ..+++++++++++++++.+.+.|+++ +++.+..+++|+++|+.+ +.+.+.+.
T Consensus 320 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~---------------~~~~~~~~ 384 (420)
T 4f4e_A 320 VLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGL---------------TSAQVDRL 384 (420)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCC---------------CHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCC---------------CHHHHHHH
Confidence 8876211 03557888899999999999999986 478888889999999775 33455444
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHH
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGL 343 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~ 343 (352)
+. ++||.+.|+. |++++. +++++++++++|++++
T Consensus 385 l~-~~gI~v~~~~--------Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 385 RE-EFGIYAVSTG--------RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp HH-HHCEECCTTS--------EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HH-hCCEEecCCC--------eEEEecCCHHHHHHHHHHHHHHh
Confidence 44 4599998853 999987 8888999999999886
No 67
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.4e-39 Score=307.68 Aligned_cols=329 Identities=22% Similarity=0.306 Sum_probs=253.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH--hcCCCC---CCCcEEEeCChHHHHHHHHHH-----hcCCCCEEEecCCCCC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK--ENGLSY---TPDQILVSNGAKQSILQAVLA-----VCSPGDEVIIPAPFWV 71 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~--~~~~~~---~~~~i~~~~g~~~a~~~~~~~-----l~~~~~~vl~~~~~~~ 71 (352)
..|+++.|..++| +.+++++. +.+... ++++|++|+|+++++..++.+ ++++||+|++++|+|.
T Consensus 132 ~~Y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~ 205 (546)
T 2zy4_A 132 CNYPVPPRMLNIS------EKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFT 205 (546)
T ss_dssp CSCCSSSSCCHHH------HHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCH
T ss_pred CCCCCCcCCHHHH------HHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCc
Confidence 3588888999999 99888765 433322 468999999999999999987 5789999999999999
Q ss_pred ChHHHHH--hcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHH--HhCCCEEEE
Q 018665 72 SYPEMAR--IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV--AKHPRLLVL 147 (352)
Q Consensus 72 ~~~~~~~--~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~--~~~~~~~li 147 (352)
.+...+. ..|.+++.++.+++++|.+|+++|++.++++++++++++||||||.+++.+++++|+++| +++ |++||
T Consensus 206 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~-~~~ii 284 (546)
T 2zy4_A 206 PYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRP-DLMIL 284 (546)
T ss_dssp HHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCT-TCEEE
T ss_pred cHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccC-CcEEE
Confidence 9998755 357889999988767788999999998888899999999999999999999999999999 788 99999
Q ss_pred ecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhh-------------h----
Q 018665 148 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKI-------------Q---- 209 (352)
Q Consensus 148 vD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~-------------~---- 209 (352)
+||+|+++.+. ..++.... .++++++.|+||.+|++|+|+||++++++ +++.+... .
T Consensus 285 ~De~y~~~~~~---~~s~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~ 359 (546)
T 2zy4_A 285 TDDVYGTFADD---FQSLFAIC--PENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLP 359 (546)
T ss_dssp EECTTGGGSTT---CCCHHHHC--GGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCS
T ss_pred EeCcchhhccc---CcCHHHhC--CCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccc
Confidence 99999987643 23443332 36899999999999999999999998875 77766321 0
Q ss_pred -------------------hccccCCChHHHHHH-----HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec
Q 018665 210 -------------------SQFTSGASSISQKAG-----VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 265 (352)
Q Consensus 210 -------------------~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 265 (352)
...+.+.+.+.|.++ .+.++. .+.+.+++++.++++++.+.+.|. . ++.+.
T Consensus 360 ~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~---~~~~~~~~r~~~~~r~~~l~~~L~-~-~~~~~ 434 (546)
T 2zy4_A 360 DVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE---ADEYKHTLKQLIRRRETTLYRELG-M-PPLRD 434 (546)
T ss_dssp CGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHHHHHHGGGT-S-SCCCC
T ss_pred cccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcC-C-CcccC
Confidence 122346777877764 234443 257788899999999999999996 4 56666
Q ss_pred CCCCceEEEeecCCcc----CCcccCCC-CCCChHHHHHHHHHccCEEeccCCCCCC-CCeEEEEeec-CHHHHHHHHHH
Q 018665 266 EPQGAFYLFIDFSTYY----GSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAA-SLTTLQAAVER 338 (352)
Q Consensus 266 ~~~~g~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~l~~~~gi~i~~g~~~~~-~~~iRi~~~~-~~~~l~~~~~~ 338 (352)
.+.+++++|++++... +..+..|- ...+..++..+++++.||.+.||..|+. ++++||+++. +++++++++++
T Consensus 435 ~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~ 514 (546)
T 2zy4_A 435 ENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRA 514 (546)
T ss_dssp TTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHH
T ss_pred CCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHH
Confidence 7789999999986310 00000000 0002334344445556999999999875 4689999998 88999999999
Q ss_pred HHHHHhhhC
Q 018665 339 IKKGLLTLR 347 (352)
Q Consensus 339 l~~~~~~~~ 347 (352)
|+++++++.
T Consensus 515 l~~~l~~~~ 523 (546)
T 2zy4_A 515 LRKMADELY 523 (546)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887654
No 68
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=5.3e-40 Score=300.53 Aligned_cols=310 Identities=16% Similarity=0.131 Sum_probs=251.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEecCCCCCChHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPD--QILVSNGAKQSILQAV--LAVCSPGDEVIIPAPFWVSYPEMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~--~i~~~~g~~~a~~~~~--~~l~~~~~~vl~~~~~~~~~~~~~ 77 (352)
.|++..|..++| +.+++++. ..+..++++ +|++|+|+++++..++ .+++++||+|+++.|+|.++...+
T Consensus 65 ~y~~~~g~~~lr------~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~ 138 (397)
T 3fsl_A 65 LYLPMEGLNCYR------HAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIF 138 (397)
T ss_dssp CCCCTTCCHHHH------HHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHH
T ss_pred cCCCCCchHHHH------HHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHH
Confidence 577888999999 99999998 444444678 9999999999999985 456789999999999999999999
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+..|.+++.+++..+.++.+|+++|++.++ ++++++++++|+||||.+++.+++++|+++|+++ |+++|+||+|++
T Consensus 139 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~ 217 (397)
T 3fsl_A 139 AGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKAR-ELIPFLDIAYQG 217 (397)
T ss_dssp HHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred HHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhC-CEEEEEecCchh
Confidence 999999999998544567899999999997 5778889999999999999999999999999999 999999999999
Q ss_pred cccCCC-CccccccCCCCCCceEEEeccccccccccceeEEEEc---ChhHHHHHHhh----hhccccCCChHHHHHHHH
Q 018665 155 IIYAPA-THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNKI----QSQFTSGASSISQKAGVA 226 (352)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 226 (352)
+.+++. ...++..+....+++++++|+||.+|++|+|+||+++ +++.++.+... ......+++.+.+.++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (397)
T 3fsl_A 218 FGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAA 297 (397)
T ss_dssp SSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHH
T ss_pred hccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 877532 2334444433467899999999999999999999974 45665544322 223345568889988888
Q ss_pred HhcccCC---ChHHHHHHHHHHHHHHHHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 227 ALGLGYA---GGEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 227 ~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
++..... ..+++++.+++++++++.+.+.|++++ ++.+..+.+|+++|++++ .+.+.+
T Consensus 298 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~- 361 (397)
T 3fsl_A 298 VLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS---------------AAQVDR- 361 (397)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC---------------HHHHHH-
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC---------------HHHHHH-
Confidence 8875211 035678888999999999999999874 688888889999987753 334444
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHH
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGL 343 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~ 343 (352)
+++++||.+.||+ |++++. +++++++++++|++++
T Consensus 362 ~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 362 LREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHHHhhC
Confidence 4445699999874 999988 8889999999998763
No 69
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=6.5e-40 Score=301.42 Aligned_cols=313 Identities=16% Similarity=0.140 Sum_probs=253.2
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEE--eCChHHHHHHHHH--HhcCCC-----CEEEecCCCCCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILV--SNGAKQSILQAVL--AVCSPG-----DEVIIPAPFWVS 72 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~--~~g~~~a~~~~~~--~l~~~~-----~~vl~~~~~~~~ 72 (352)
.|++..|..++| +.+++++. .+++.+++++|++ |+|+++++..++. .++++| |+|+++.|+|.+
T Consensus 69 ~y~~~~g~~~lr------~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~ 142 (412)
T 1ajs_A 69 EYLPILGLAEFR------TCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWEN 142 (412)
T ss_dssp CCCCTTCCHHHH------HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTH
T ss_pred CCCCCCCCHHHH------HHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHH
Confidence 588889999999 99999996 6666567899999 9999999998864 456788 999999999999
Q ss_pred hHHHHHhcCCe-EEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 73 YPEMARIADAT-PVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 73 ~~~~~~~~g~~-v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
+...++..|.+ ++.+++..++++.+|++++++++++ +++++++++|+||||.++|.+++++|+++|+++ |+++|+
T Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~ 221 (412)
T 1ajs_A 143 HNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRR-FLFPFF 221 (412)
T ss_dssp HHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEE
T ss_pred HHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEE
Confidence 99999999999 9999986445677999999998864 667888899999999999999999999999999 999999
Q ss_pred cccccccccCC--CCccccccCCCCCCceEEEeccccccccccceeEEEEc---Chh----HHHHHHhhhhccccCCChH
Q 018665 149 DEIYEHIIYAP--ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSI 219 (352)
Q Consensus 149 D~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~----~~~~~~~~~~~~~~~~~~~ 219 (352)
||+|+++.+++ ....++..+....++++++.|+||.+|++|+|+||+++ +++ +++.+.........+++++
T Consensus 222 De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (412)
T 1ajs_A 222 DSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQ 301 (412)
T ss_dssp EESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSH
T ss_pred EcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChH
Confidence 99999887754 12223333322357889999999999978999999998 887 4444444333333446999
Q ss_pred HHHHHHHHhcccCC---ChHHHHHHHHHHHHHHHHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCC
Q 018665 220 SQKAGVAALGLGYA---GGEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 293 (352)
Q Consensus 220 ~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
.+.++.++++.... ..+++++++++++++++.+.+.|+++. ++.+..+.+|+++|+.+ +
T Consensus 302 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~ 366 (412)
T 1ajs_A 302 GARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL---------------N 366 (412)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC---------------C
T ss_pred HHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCC---------------C
Confidence 99999999986210 024678889999999999999999873 47777788899888754 3
Q ss_pred hHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhh
Q 018665 294 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 294 ~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~ 346 (352)
. ++...+++++||.+.|+ +|++++. +++++++++++|+++++++
T Consensus 367 ~-~~~~~~l~~~gv~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 367 P-KQVEYLINQKHIYLLPS--------GRINMCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp H-HHHHHHHHTTCEECCTT--------SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred H-HHHHHHHHhCCEEecCC--------cEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 2 44455555669999874 5999996 8899999999999998764
No 70
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.8e-38 Score=282.69 Aligned_cols=290 Identities=18% Similarity=0.281 Sum_probs=240.9
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
..| ++++..++| +.+|++++ +++++|++|+|+++++..++..+ +||+|+++.|+|.++...++..|
T Consensus 46 ~~y-~~~~~~~lr------~~la~~~~-----~~~~~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g 111 (337)
T 3p1t_A 46 NRY-PFDAEPRVM------RKLAEHFS-----CPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSG 111 (337)
T ss_dssp TSC-CTTHHHHHH------HHHHHHHT-----SCGGGEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHHHHTTSC
T ss_pred ccC-CCCchHHHH------HHHHHHhC-----cCHHHEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHHHHHHcC
Confidence 346 567889999 99999997 67789999999999999999988 88999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++ .++.+|++++++. .+++++++++|+||||.++| ++++.++|+++ ++ +|+||+|+++...+.
T Consensus 112 ~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~---~~~l~~l~~~~-~~-~ivDea~~~~~~~~~- 181 (337)
T 3p1t_A 112 LRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALS---AGELDQLRQRA-GK-LLIDETYVDYSSFRA- 181 (337)
T ss_dssp CEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCC---HHHHHHHHHHC-SE-EEEECTTGGGSSCSS-
T ss_pred CEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCC---HHHHHHHHHhC-Cc-EEEECCChhhccccc-
Confidence 999999986 3567999999986 36789999999999999999 66777778899 87 555999998654332
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.. ....+++++++|+||.+|++|+|+||+++++++++.+..... .++++.+.+.++.++++. .+...+.
T Consensus 182 -~~----~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~----~~~~~~~ 250 (337)
T 3p1t_A 182 -RG----LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW--FCNVGTLDLHALEAALDN----DRAREAH 250 (337)
T ss_dssp -SC----CCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSC--TTCSCHHHHHHHHHHHTC----HHHHHHH
T ss_pred -cc----cccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcC--CCCCCHHHHHHHHHHhCC----HHHHHHH
Confidence 11 122467899999999999999999999999999998877543 456889999999999885 4556677
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeE
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 321 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~i 321 (352)
.+++.++++.+.+.|+++ |+.+..+.+++ +++..+ +..++.+.|.++ ||.+.+|..|+.++++
T Consensus 251 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~--------------~~~~~~~~l~~~-gi~v~~g~~~~~~~~i 313 (337)
T 3p1t_A 251 IAKTLAQRRRVADALRGL-GYRVASSEANF-VLVENA--------------AGERTLRFLRER-GIQVKDAGQFGLHHHI 313 (337)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCBCCCSSSE-EEEECT--------------TTHHHHHHHHHT-TEECEEGGGGTCCSEE
T ss_pred HHHHHHHHHHHHHHHHHC-cCEECCCCCeE-EEEEcC--------------CHHHHHHHHHHC-CeEEEECccCCCCCeE
Confidence 777888889999999988 88887666665 555554 445677777654 9999999999888999
Q ss_pred EEEeecCHHHHHHHHHHHHHHHh
Q 018665 322 RISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 322 Ri~~~~~~~~l~~~~~~l~~~~~ 344 (352)
|++++ ++++++++++.|+++.+
T Consensus 314 Ris~~-~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 314 RISIG-REEDNDRLLAALAEYSD 335 (337)
T ss_dssp EEECC-CHHHHHHHHHHHHHHTC
T ss_pred EEecC-CHHHHHHHHHHHHHHhh
Confidence 99998 67899999999988764
No 71
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1e-39 Score=300.18 Aligned_cols=313 Identities=15% Similarity=0.116 Sum_probs=250.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEE--eCChHHHHHHHH--HHhcCCCCEEEecCCCCCChHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILV--SNGAKQSILQAV--LAVCSPGDEVIIPAPFWVSYPEMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~--~~g~~~a~~~~~--~~l~~~~~~vl~~~~~~~~~~~~~ 77 (352)
.|++..|..++| +.+++++. .+++.+++++|++ |+|+++++..++ ..++.+||+|+++.|+|.++...+
T Consensus 68 ~y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~ 141 (412)
T 1yaa_A 68 EYLGITGLPSLT------SNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIF 141 (412)
T ss_dssp CCCCTTCCHHHH------HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHH
T ss_pred CCCCCCCcHHHH------HHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHH
Confidence 588889999999 99999997 6666567889999 999999999884 344568999999999999999999
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhccCC---eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~---~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+..|.+++.+++....++.+|+++|+++++++ ..++++++|+||||.+++.+++++|+++|+++ |+++|+||+|++
T Consensus 142 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~ 220 (412)
T 1yaa_A 142 ENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASK-NHIALFDTAYQG 220 (412)
T ss_dssp HTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred HHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEeccccc
Confidence 99999999999832235779999999998643 34555599999999999999999999999999 999999999998
Q ss_pred cccCC--CCccccccCCCCCC---ceEEEeccccccccccceeEEEE--c-----Chh----HHHHHHhhhhccccCCCh
Q 018665 155 IIYAP--ATHTSFASLPGMWE---RTLTVNGFSKAFAMTGWRLGYIA--G-----PKH----FVAACNKIQSQFTSGASS 218 (352)
Q Consensus 155 ~~~~~--~~~~~~~~~~~~~~---~~i~~~s~sK~~g~~g~~~g~l~--~-----~~~----~~~~~~~~~~~~~~~~~~ 218 (352)
+.+++ ....++..+....+ ++++++|+||.+|++|+|+||++ + +++ +++.+.........+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 300 (412)
T 1yaa_A 221 FATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPA 300 (412)
T ss_dssp TSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCH
T ss_pred ccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCCh
Confidence 87654 11223322221124 78999999999997799999998 7 566 777777644444456789
Q ss_pred HHHHHHHHHhcccCC---ChHHHHHHHHHHHHHHHHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCC
Q 018665 219 ISQKAGVAALGLGYA---GGEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 292 (352)
Q Consensus 219 ~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
+.+.++.++++.... ..+++++.+++++++++.+.+.|++++ ++.+..+.+|+++|+.+
T Consensus 301 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--------------- 365 (412)
T 1yaa_A 301 YGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL--------------- 365 (412)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC---------------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCC---------------
Confidence 999999999986210 024788889999999999999999873 38888888899888754
Q ss_pred ChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhh
Q 018665 293 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~ 346 (352)
+...+ ..+++++||.+.+ ++||+++. +++++++++++|+++++.+
T Consensus 366 ~~~~~-~~~l~~~gi~v~~--------~~Ris~~~~~~~~i~~~~~~l~~~~~~~ 411 (412)
T 1yaa_A 366 TPQMV-KRLEETHAVYLVA--------SGRASIAGLNQGNVEYVAKAIDEVVRFY 411 (412)
T ss_dssp CHHHH-HHHHHHHCEECCT--------TSEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred CHHHH-HHHHHhCCEEecc--------CcEEEEccCCHhHHHHHHHHHHHHHHhh
Confidence 34455 5555556999976 47999997 8899999999999998753
No 72
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.5e-39 Score=297.28 Aligned_cols=310 Identities=13% Similarity=0.081 Sum_probs=247.8
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEE--EeCChHHHHHHHH---HHhcCCCCEEEecCCCCCChHH
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQIL--VSNGAKQSILQAV---LAVCSPGDEVIIPAPFWVSYPE 75 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~--~~~g~~~a~~~~~---~~l~~~~~~vl~~~~~~~~~~~ 75 (352)
..|++..|..++| +.+++++. ..+.++++++|. .+.++++++..+. .++.++||+|+++.|+|.++..
T Consensus 73 ~~y~~~~g~~~lr------~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~ 146 (409)
T 4eu1_A 73 MDYAPVTGIASFV------EEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES 146 (409)
T ss_dssp CCCCCTTCCHHHH------HHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH
T ss_pred ccCCCCCCcHHHH------HHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH
Confidence 3588899999999 99999985 333223367884 4999999998654 3456889999999999999999
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.++..|.+++.+++..+.++.+|+++|++.++ ++++++++++||||||.+++.+++++|+++|+++ |+++|+||+|
T Consensus 147 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~y 225 (409)
T 4eu1_A 147 IFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRR-NHIPFVDMAY 225 (409)
T ss_dssp HHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred HHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEeccc
Confidence 99999999999998655677899999999985 3556677799999999999999999999999999 9999999999
Q ss_pred cccccCCC--CccccccCCCCCCceEEEeccccccccccceeEEE---EcChh----HHHHHHhhhhccccCCChHHHHH
Q 018665 153 EHIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI---AGPKH----FVAACNKIQSQFTSGASSISQKA 223 (352)
Q Consensus 153 ~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
+++.+.+. ...++..+....+++++++|+||.+|++|+|+||+ +.+++ +++.+.........+++.+.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (409)
T 4eu1_A 226 QGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWV 305 (409)
T ss_dssp TTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred cccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHH
Confidence 99877652 11233332223578899999999999999999996 45667 66666665555566788999999
Q ss_pred HHHHhcccCCC---hHHHHHHHHHHHHHHHHHHHHhcccCC----ceecCCCCceEEEeecCCccCCcccCCCCCCChHH
Q 018665 224 GVAALGLGYAG---GEVVSKMVKAFRERRDFLVKSFGELEG----VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 224 ~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
+.++++..... .+.+++.+++++++++.+.+.|+++ | +.+..+++++++|+.++ .+
T Consensus 306 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------------~~ 368 (409)
T 4eu1_A 306 VSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC-GSVHDWSHIERQVGMMAYTGLT----------------RE 368 (409)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCSCCHHHHHSCSSEEECCCC----------------HH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcceecCCceEEEEeCCC----------------HH
Confidence 99999862100 2346778889999999999999887 4 77778899999986542 24
Q ss_pred HHHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHH
Q 018665 297 LCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGL 343 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~ 343 (352)
+++.+++++||.+.|+. |++++. +++++++++++|++++
T Consensus 369 ~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 369 QVELLRSEYHIYMTLNG--------RAAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEcCCC--------EEEEEecCHhhHHHHHHHHHHHh
Confidence 56677766799998863 999987 7788999999999876
No 73
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.2e-39 Score=297.99 Aligned_cols=310 Identities=15% Similarity=0.123 Sum_probs=245.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEE--eCChHHHHHHHHHHh--cCCCCEEEecCCCCCChHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILV--SNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~--~~g~~~a~~~~~~~l--~~~~~~vl~~~~~~~~~~~~~ 77 (352)
.|++..|..++| +++++++. +.+.++++++|++ ++|+++++..++..+ +.+||+|+++.|+|.++...+
T Consensus 64 ~y~~~~g~~~lr------~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~ 137 (396)
T 2q7w_A 64 NYLGIDGIPEFG------RCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVF 137 (396)
T ss_dssp CCCCTTCCHHHH------HHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHH
T ss_pred CCCCCCCCHHHH------HHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH
Confidence 588889999999 99999997 4443345789998 999999999998765 368999999999999999999
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+..|.+++.++.+.++++.+|++++++.+++ +++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|++
T Consensus 138 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~ 216 (396)
T 2q7w_A 138 NSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEK-GWLPLFDFAYQG 216 (396)
T ss_dssp HHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTT
T ss_pred HHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEeccccc
Confidence 9999999999986445677999999999864 467788899999999999999999999999999 999999999998
Q ss_pred cccCC-CCccccccCCCCCCceEEEeccccccccccceeEEEEc---Ch----hHHHHHHhhhhccccCCChHHHHHHHH
Q 018665 155 IIYAP-ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PK----HFVAACNKIQSQFTSGASSISQKAGVA 226 (352)
Q Consensus 155 ~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
+.+++ ....++..+....++++++.|+||.+|++|+|+||+++ ++ ++++.+.........+++++.+.++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 296 (396)
T 2q7w_A 217 FARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVAT 296 (396)
T ss_dssp SSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred ccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHH
Confidence 87643 11223332322246889999999999989999999986 55 355555443333334569999999999
Q ss_pred HhcccCC---ChHHHHHHHHHHHHHHHHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 227 ALGLGYA---GGEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 227 ~l~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
+++.... ..+++++.+++++++++.+.+.|+++. ++.+..+.+|+++|+++ +...+.+.
T Consensus 297 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 361 (396)
T 2q7w_A 297 ILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGL---------------TKEQVLRL 361 (396)
T ss_dssp HHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCC---------------CHHHHHHH
T ss_pred HhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecC---------------CHHHHHHH
Confidence 9875200 025677888899999999999999873 37877788899888765 23344444
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHH
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGL 343 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~ 343 (352)
++++||.+.+| +||+++. +++++++++++|++++
T Consensus 362 -l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 362 -REEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp -HHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred -HHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhcC
Confidence 44459999874 5999997 8899999999998763
No 74
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=3.3e-39 Score=299.56 Aligned_cols=314 Identities=16% Similarity=0.146 Sum_probs=252.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEE--eCChHHHHHH--HHHHhcCCCCEEEecCCCCCChHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILV--SNGAKQSILQ--AVLAVCSPGDEVIIPAPFWVSYPEMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~--~~g~~~a~~~--~~~~l~~~~~~vl~~~~~~~~~~~~~ 77 (352)
.|.+..|..++| +.+++++. ....++++++|++ |+|+++++.. .+.+++.+||+|++++|+|.++...+
T Consensus 89 ~Y~~~~G~~~lr------~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~ 162 (448)
T 3meb_A 89 EYPPVAGFPLFL------EAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIY 162 (448)
T ss_dssp SCCCTTCCHHHH------HHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHH
T ss_pred CCCCCcchHHHH------HHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHH
Confidence 478889999999 99999983 1111122689999 9999999987 45567789999999999999999999
Q ss_pred H----hcCCeEEEecccCCC-CcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 78 R----IADATPVILPTRISE-NFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 78 ~----~~g~~v~~i~~~~~~-~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
+ ..|.+++.++..+.+ ++.+|++++++.++ ++++++++++||||||..++.+++++|+++|+++ |+++|+|
T Consensus 163 ~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~-~~~li~D 241 (448)
T 3meb_A 163 DKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEK-KHIAFFD 241 (448)
T ss_dssp HHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEE
T ss_pred HhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEe
Confidence 9 999999999985444 67899999999997 3577888899999999999999999999999999 9999999
Q ss_pred ccccccccCCC--CccccccCCCCCCceEEEeccccccccccceeEEE--Ec--------C-h----hHHHHHHhhhhcc
Q 018665 150 EIYEHIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI--AG--------P-K----HFVAACNKIQSQF 212 (352)
Q Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l--~~--------~-~----~~~~~~~~~~~~~ 212 (352)
|+|+++.+++. ...++..+....++++++.|+||.+|++|+|+||+ ++ . + ++++.+....+..
T Consensus 242 eay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 321 (448)
T 3meb_A 242 SAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKT 321 (448)
T ss_dssp ESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcc
Confidence 99998876541 11222222222468899999999999999999998 66 4 4 5666666655666
Q ss_pred ccCCChHHHHHHHHHhcccCCCh---HHHHHHHHHHHHHHHHHHHHhccc--CC------ceecCCCCceEEEeecCCcc
Q 018665 213 TSGASSISQKAGVAALGLGYAGG---EVVSKMVKAFRERRDFLVKSFGEL--EG------VKMSEPQGAFYLFIDFSTYY 281 (352)
Q Consensus 213 ~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~--~g------~~~~~~~~g~~~~~~~~~~~ 281 (352)
..+++.+.+.++.+++....... +.+++.+++++++++.+.+.|+++ ++ +.+..+++++++|+.++
T Consensus 322 ~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 398 (448)
T 3meb_A 322 WSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT--- 398 (448)
T ss_dssp TSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC---
T ss_pred cCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC---
Confidence 66788999999999987621111 347788889999999999999876 55 67777889999987652
Q ss_pred CCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhh
Q 018665 282 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~ 346 (352)
.+++..|++++||.+.||+ .|||++. +++++++++++|+++++++
T Consensus 399 -------------~~~~~~ll~~~gV~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 399 -------------PEHVDYLKEKWSIYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp -------------HHHHHHHHHHHCEEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHHS
T ss_pred -------------HHHHHHHHHhCCEEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 3556677666799999975 2999988 8888999999999999854
No 75
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=8e-38 Score=282.42 Aligned_cols=292 Identities=18% Similarity=0.292 Sum_probs=244.6
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 85 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~ 85 (352)
++.+..++| +.++++++ +++++|++++|+++++..++.+++++||+|+++.|+|.++...++..|.+++
T Consensus 63 ~~~~~~~lr------~~la~~~g-----~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~ 131 (360)
T 3hdo_A 63 PSASSQKLR------EVAGELYG-----FDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVR 131 (360)
T ss_dssp CCSSCHHHH------HHHHHHHT-----CCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEE
T ss_pred CCCchHHHH------HHHHHHhC-----cCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEE
Confidence 455678999 99999996 6789999999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 86 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.++++. ++.+ +++++.+ +++++++++|+||||.++| ++++.++|+++ |+++|+||+|+++. +....++
T Consensus 132 ~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~~---~~~l~~l~~~~-~~~li~De~~~~~~--~~~~~~~ 199 (360)
T 3hdo_A 132 TFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSFP---LEYIDELARRC-AGMLVLDETYAEFA--ESNALEL 199 (360)
T ss_dssp EECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCCC---HHHHHHHHHHB-SSEEEEECTTGGGS--SCCCTHH
T ss_pred EeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCcC---HHHHHHHHHHC-CCEEEEECChHhhC--CcchhHH
Confidence 999864 3333 5555444 3568899999999999999 67788888899 99999999999863 3212222
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 245 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (352)
....++++++.|+||.+|++|+|+||+++++++++.+...... +++|++.+.++.++++. .+++++.++++
T Consensus 200 ---~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~----~~~~~~~~~~~ 270 (360)
T 3hdo_A 200 ---VRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRDH--YNLDRLAQAACVAALRD----QAYLSECCRRI 270 (360)
T ss_dssp ---HHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSCS--CCSCHHHHHHHHHHHHC----HHHHHHHHHHH
T ss_pred ---hccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCCC--CCCCHHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 1235788999999999998999999999999999998876543 56999999999999985 67889999999
Q ss_pred HHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEe
Q 018665 246 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 325 (352)
Q Consensus 246 ~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~ 325 (352)
+++++.+.+.|+++ ++.+..+ .+.++|+.+++. +..++.+.|.++ ||.+.+++....++++|+++
T Consensus 271 ~~~~~~l~~~L~~~-~~~~~~~-~~~~~~~~~~~~------------~~~~l~~~l~~~-gi~v~~~~~~~~~~~iRis~ 335 (360)
T 3hdo_A 271 RETREWFTTELRSI-GYDVIPS-QGNYLFATPPDR------------DGKRVYDGLYAR-KVLVRHFSDPLLAHGMRISI 335 (360)
T ss_dssp HHHHHHHHHHHHHT-TCEECCC-SSSEEEEECTTC------------CHHHHHHHHHHT-TEECBCCCSTTTTTSEEEEC
T ss_pred HHHHHHHHHHHHHC-CCEEcCC-CccEEEEECCCC------------CHHHHHHHHHHC-CEEEEECCCCCCCCEEEEEc
Confidence 99999999999988 8887654 455677877653 788999988865 99999987655678999999
Q ss_pred ecCHHHHHHHHHHHHHHHhh
Q 018665 326 AASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 326 ~~~~~~l~~~~~~l~~~~~~ 345 (352)
+ +++|++++++.|+++.+.
T Consensus 336 ~-~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 336 G-TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp C-CHHHHHHHHHHHHHHHC-
T ss_pred C-CHHHHHHHHHHHHHHhcc
Confidence 8 689999999999988654
No 76
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=7.2e-39 Score=292.16 Aligned_cols=298 Identities=17% Similarity=0.191 Sum_probs=239.0
Q ss_pred CccCCCCCC-----hhhhccchhhHHHHHHHHhcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCC----EEEecCCCCC
Q 018665 2 QFVRVSQGT-----LQMRVLWSFVQQFVINLKENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGD----EVIIPAPFWV 71 (352)
Q Consensus 2 ~~y~~~~~~-----~~l~~~~~~~~~ia~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~----~vl~~~~~~~ 71 (352)
..|++..|. .++| +++|++++++|+.+.+ ++|++|+|+++++..++.+++++|| +|++++|+|.
T Consensus 57 ~~Y~~~~G~~~~~~~~lr------~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~ 130 (391)
T 3bwn_A 57 SYFSDMTNLCWFLEPELE------DAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYS 130 (391)
T ss_dssp SSCSCTTSSSTTSCHHHH------HHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCT
T ss_pred hcCCCCCCcccccCHHHH------HHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCch
Confidence 358888898 9999 9999999977888877 5999999999999999999999999 9999999999
Q ss_pred ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 72 SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 72 ~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
.+...++..|.+++.++++.+ + ++ .++++++++++||||||.+++ +|++.++++ ++++|+||+
T Consensus 131 ~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~-~~~ii~De~ 193 (391)
T 3bwn_A 131 TYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELVTSPNNPDGTIRE-----TVVNRPDDD-EAKVIHDFA 193 (391)
T ss_dssp HHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEEESSCTTTCCCCC-----CCC-----C-CCEEEEECT
T ss_pred hHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEECCCCCCCchhHH-----HHHHHhhcC-CCEEEEeCC
Confidence 999999999999998887632 2 12 247889999999999999996 344422333 499999999
Q ss_pred ccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcc
Q 018665 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
|.. +. ..++.. ..+++++++|+||.+|++|+|+||+++ ++++++.+.........+++.+.|.++.++++.
T Consensus 194 y~~----~~-~~~l~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 265 (391)
T 3bwn_A 194 YYW----PH-YTPITR---RQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNV 265 (391)
T ss_dssp TCS----TT-TSCCCC---CBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred CCC----CC-CCcccc---CCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhC
Confidence 973 21 122221 357899999999999999999999997 889999988877655677999999999999986
Q ss_pred cCC-------ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC-------------CCceEEEeecCCccCCcccCCCC
Q 018665 231 GYA-------GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-------------QGAFYLFIDFSTYYGSEAEGFGK 290 (352)
Q Consensus 231 ~~~-------~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~ 290 (352)
+.. ...++++.++.++++++.+.+.|++++++.+..+ ++|+++|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~----------- 334 (391)
T 3bwn_A 266 LKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE----------- 334 (391)
T ss_dssp HHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS-----------
T ss_pred cchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc-----------
Confidence 310 1457889999999999999999998877766543 445688998863
Q ss_pred CCChHHHHHHHHHccCEEeccCCCCCC-CCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 291 IENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 291 ~~~~~~~~~~l~~~~gi~i~~g~~~~~-~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
.+.+.+.|. ++||.+.||..|+. ++++|||++.+++++++++++|++++++
T Consensus 335 ---~~~~~~~l~-~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 335 ---ETDLVSELR-RHKVMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLANMKLI 386 (391)
T ss_dssp ---SCCHHHHHH-HTTEECEEGGGGTCCTTEEEEESCSCHHHHHHHHHHHHSCC--
T ss_pred ---HHHHHHHHH-HCCEEEccCCCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 123444444 56999999999875 6899999999889999999999988765
No 77
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.6e-38 Score=289.07 Aligned_cols=307 Identities=15% Similarity=0.102 Sum_probs=242.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEE--eCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILV--SNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~--~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~ 78 (352)
.|++..+..++| +++++++...+ .++++|++ ++|++++++.++..+.. +||+|+++.|+|.++...++
T Consensus 64 ~y~~~~g~~~lr------~~la~~~~~~~--~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~ 135 (394)
T 2ay1_A 64 TYAGLSGEPEFQ------KAMGELILGDG--LKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMN 135 (394)
T ss_dssp CCCCSSCCHHHH------HHHHHHHHGGG--CCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHH
T ss_pred CCCCCCCcHHHH------HHHHHHHhCCC--CCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH
Confidence 587888999999 99999985212 26789999 99999999999987754 89999999999999999999
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
..|.+++.++++.++++.+|++++++.+++ +++++++++|+||||.++|.+++++|+++|+++ |+++|+||+|+++
T Consensus 136 ~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~ 214 (394)
T 2ay1_A 136 FMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKT-GALPLIDLAYQGF 214 (394)
T ss_dssp HHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEECCTTS
T ss_pred HcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecCcccc
Confidence 999999999986545677999999999864 356777899999999999999999999999999 9999999999987
Q ss_pred ccCCC-CccccccCCCCCCceEEEeccccccccccceeEEEEc---ChhHHHHH----HhhhhccccCCChHHHHHHHHH
Q 018665 156 IYAPA-THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVAAC----NKIQSQFTSGASSISQKAGVAA 227 (352)
Q Consensus 156 ~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 227 (352)
.+++. ...++..+....++++++.|+||.+|++|+|+||+++ ++++++.+ .........+++++.+.++.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~ 294 (394)
T 2ay1_A 215 GDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTV 294 (394)
T ss_dssp SSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHH
T ss_pred ccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHH
Confidence 66431 1122332222235789999999999989999999998 66654443 3222233345689999999999
Q ss_pred hcccCC---ChHHHHHHHHHHHHHHHHHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHH
Q 018665 228 LGLGYA---GGEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 301 (352)
Q Consensus 228 l~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (352)
++.... ..++.++++++++++++.+.+.|+++. ++.+..+.+|+++|++++ ...+.+.+
T Consensus 295 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~---------------~~~~~~~l 359 (394)
T 2ay1_A 295 LTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT---------------PEQVKRIK 359 (394)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC---------------HHHHHHHH
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC---------------HHHHHHHH
Confidence 875200 025678888999999999999998873 477777788998888653 33454444
Q ss_pred HHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHH
Q 018665 302 LDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKG 342 (352)
Q Consensus 302 ~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~ 342 (352)
. ++||.+.+| +|++++. +++++++++++|+++
T Consensus 360 ~-~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 360 E-EFGIYMVGD--------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp H-HHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred H-hCCEEecCC--------CeEEeecCCHhhHHHHHHHHHHc
Confidence 4 459999874 5999987 889999999999876
No 78
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=8.8e-38 Score=287.82 Aligned_cols=296 Identities=14% Similarity=0.186 Sum_probs=244.2
Q ss_pred cCCCC-C---ChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHh--------cCCCCEEEecCCCC
Q 018665 4 VRVSQ-G---TLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAV--------CSPGDEVIIPAPFW 70 (352)
Q Consensus 4 y~~~~-~---~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l--------~~~~~~vl~~~~~~ 70 (352)
|++.. | ..++| +++|++++ +.+..+++++|++|+|+++++..++.++ +++||+|+++.|+|
T Consensus 92 Y~~~~~G~~~~~~lr------~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y 165 (427)
T 2hox_A 92 YFFNPVSNFISFELE------KTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFY 165 (427)
T ss_dssp SSCSSCCTTCCHHHH------HHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCC
T ss_pred CCCCCCCccchHHHH------HHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCc
Confidence 77777 8 89999 99999999 6666678899999999999999999999 89999999999999
Q ss_pred CChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 71 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 71 ~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
..+...++..|.+++.+ .+|++.|+++++++++++++++||||||.+++ +. + . ++..+.|+
T Consensus 166 ~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~~-------l--~-~~~~i~d~ 226 (427)
T 2hox_A 166 PVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-AV-------I--K-GCKSIYDM 226 (427)
T ss_dssp HHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-CS-------S--T-TCEEEEEC
T ss_pred ccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEEEEcCCCCCcccccH-HH-------H--c-CCCEEEee
Confidence 99999999999887643 36788999988888999999999999999999 42 2 2 44567777
Q ss_pred cccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhc
Q 018665 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALG 229 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 229 (352)
++.+ + ..++..+. .++++++.|+||.+|++|+|+||+++ ++++++.+.........+++.+.|.++..+++
T Consensus 227 ~~~~----~--~~s~~~~~--~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~ 298 (427)
T 2hox_A 227 VYYW----P--HYTPIKYK--ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLK 298 (427)
T ss_dssp TTCS----T--TTSCCCSC--BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred cccC----C--CCCccccC--CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhh
Confidence 6632 1 23444443 57889999999999999999999999 58999999888776667899999999999987
Q ss_pred ccC--------CChHHHHHHHHHHHHHHHHHHHHhcccCCcee--------------cCCCCceEEEeecCCccCCcccC
Q 018665 230 LGY--------AGGEVVSKMVKAFRERRDFLVKSFGELEGVKM--------------SEPQGAFYLFIDFSTYYGSEAEG 287 (352)
Q Consensus 230 ~~~--------~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~--------------~~~~~g~~~~~~~~~~~~~~~~~ 287 (352)
... ...+++++.++.++++++.+.+.|++++|+.+ ..|++|+|+|++++.
T Consensus 299 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------- 370 (427)
T 2hox_A 299 EVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------- 370 (427)
T ss_dssp HHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS--------
T ss_pred cchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC--------
Confidence 521 01356777888999999999999998766654 245679999999874
Q ss_pred CCCCCChHHHHHHHHHccCEEeccCCCCCC-CCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 288 FGKIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 288 ~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+..++++.|+++.||.+.||..|+. ++++|||++.+++++++++++|++++++
T Consensus 371 -----~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 371 -----EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp -----GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHHHHHHHHHHHHHTC
T ss_pred -----cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 3445677777556999999998875 7899999999999999999999999864
No 79
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.4e-37 Score=276.50 Aligned_cols=294 Identities=17% Similarity=0.288 Sum_probs=235.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.|+++.+ .++| +.+|++++ +++++|++|+|+++++..++.++. ||+|+++.|+|.++...++..|.
T Consensus 46 ~y~~~~~-~~lr------~~la~~~~-----~~~~~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~ 111 (350)
T 3fkd_A 46 HYPEPDA-GTLR------QMLAKRNS-----VDNNAILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEH 111 (350)
T ss_dssp SCCCTTC-HHHH------HHHHHHTT-----CCGGGEEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTC
T ss_pred cCCCCcH-HHHH------HHHHHHhC-----cCHHHEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCC
Confidence 4554444 8899 99999986 678899999999999999999987 89999999999999999999999
Q ss_pred eEEEecc-cCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 83 TPVILPT-RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 83 ~v~~i~~-~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+++.+++ +..++ +++ ++++++++++|+||||.++|.+++++|+++|++ .++|+||+|+++.+.+..
T Consensus 112 ~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~---~~li~Dea~~~~~~~~~~ 178 (350)
T 3fkd_A 112 EVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPD---TTFVLDQSYVSFTTEEVI 178 (350)
T ss_dssp EEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTT---SEEEEECTTTTSCSSCCC
T ss_pred eEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCC---CEEEEECchhhhccCcch
Confidence 9999998 53233 333 578999999999999999996666666655532 599999999988765532
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
.. ... ...++++++.|+||.+|++|+|+||+++++++++.+...... ++++.+.+.++.++++.. ..+.+++
T Consensus 179 ~~--~~~-~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~---~~~~~~~ 250 (350)
T 3fkd_A 179 RP--ADI-KGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTP--WAVNALAIEAAKFILIHP---AQFTLPI 250 (350)
T ss_dssp CG--GGG-TTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCT--TCSCHHHHHHHHHHHHCT---TTTCCCH
T ss_pred hh--HHh-hcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCC--CCCCHHHHHHHHHHHhCH---HHHHHHH
Confidence 22 222 236788999999999999999999999999999998876543 468999999999999863 2233333
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--CC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DT 319 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--~~ 319 (352)
.+.. ++++.+.+.|+++|++.+.++ .+.++|++++.. ++.++.+.|.++.||.+.||..|+. ++
T Consensus 251 ~~~~-~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~ 316 (350)
T 3fkd_A 251 RKWQ-RNTVDFITALNRLDGVEVHPS-GTTFFLLRLKKG------------TAAELKKYMLEEYNMLIRDASNFRGLDES 316 (350)
T ss_dssp HHHH-HHHHHHHHHHHHSTTEEECCC-SSSEEEEEESSS------------CHHHHHHHHHHTTCEECEECTTSTTCCTT
T ss_pred HHHH-HHHHHHHHHHhcCCCcEECCC-CCcEEEEECCCC------------CHHHHHHHHHHHCCEEEEeCccCCCCCCC
Confidence 4434 788889999988889888654 455677888763 6789999999846999999988865 68
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 320 CIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
++||+++ +.++++++++.|+++.++.
T Consensus 317 ~iRis~~-~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 317 YVRITTQ-RPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp EEEEECC-CHHHHHHHHHHHHHHHTC-
T ss_pred EEEEEcC-CHHHHHHHHHHHHHHHHHh
Confidence 9999988 5678889999998887654
No 80
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=2.4e-36 Score=270.08 Aligned_cols=283 Identities=22% Similarity=0.348 Sum_probs=231.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
.| ++.+..++| +.+++++++. .+++++|++++|+++++..++.++ ||+|+++ |+|.++...++..|.
T Consensus 52 ~y-~~~~~~~lr------~~la~~~~~~--~~~~~~v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~ 118 (335)
T 1uu1_A 52 IY-YDSPDEELI------EKILSYLDTD--FLSKNNVSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIFAKAVGA 118 (335)
T ss_dssp SC-CCSSCHHHH------HHHHHHHTCS--SCCGGGEEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHHHHHHTC
T ss_pred cC-CCCchHHHH------HHHHHHcCCC--CCCHHHEEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHHHHHcCC
Confidence 35 445688999 9999999733 356789999999999999999988 7999999 999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++++ .++.+|++++ +++++|++++|+||||.++|.+ ++.++++.. | ++|+||+|+++...
T Consensus 119 ~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~---~l~~l~~~~-~-~li~De~~~~~~~~---- 182 (335)
T 1uu1_A 119 KFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFERE---EIERILKTG-A-FVALDEAYYEFHGE---- 182 (335)
T ss_dssp EEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHH---HHHHHHHTT-C-EEEEECTTHHHHCC----
T ss_pred eEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHH---HHHHHHHhC-C-EEEEECcchhhcch----
Confidence 99999885 3456787776 4789999999999999999955 555555567 8 89999999976532
Q ss_pred cccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
+........++++++.|+||.+|++|+|+||+++++++++.+...... +++|++.+.++.++++. .+++++.+
T Consensus 183 -~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~----~~~~~~~~ 255 (335)
T 1uu1_A 183 -SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLP--FNVSYVSQMFAKVALDH----REIFEERT 255 (335)
T ss_dssp -CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCT--TCSCHHHHHHHHHHHHT----HHHHHHHH
T ss_pred -hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCC--CCcCHHHHHHHHHHhCC----HHHHHHHH
Confidence 212211225688999999999998999999999999999988776543 47999999999999985 56788889
Q ss_pred HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEE
Q 018665 243 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 322 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iR 322 (352)
++++++++++.+.|+++ |+.+. +..++++|+++++. +..++.+.|.++ ||.+.+ .++++|
T Consensus 256 ~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------~~~~~~~~l~~~-gi~v~~-----~~~~iR 315 (335)
T 1uu1_A 256 KFIVEERERMKSALREM-GYRIT-DSRGNFVFVFMEKE------------EKERLLEHLRTK-NVAVRS-----FREGVR 315 (335)
T ss_dssp HHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECCTH------------HHHHHHHHHHHH-TEEEEE-----ETTEEE
T ss_pred HHHHHHHHHHHHHHHHC-CcEEc-CCCCeEEEEECCCC------------CHHHHHHHHHHC-CEEEEE-----CCCeEE
Confidence 99999999999999987 77764 45677789988752 577888988875 999988 367999
Q ss_pred EEeecCHHHHHHHHHHHHHH
Q 018665 323 ISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 323 i~~~~~~~~l~~~~~~l~~~ 342 (352)
++++. .+++++++++|+++
T Consensus 316 is~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 316 ITIGK-REENDMILRELEVF 334 (335)
T ss_dssp EECCC-HHHHHHHHHHHHCC
T ss_pred EEeCC-HHHHHHHHHHHHhh
Confidence 99976 57799999998764
No 81
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=9.5e-36 Score=272.44 Aligned_cols=302 Identities=18% Similarity=0.198 Sum_probs=239.9
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|.+..|..+++ +.+++++. ..| .+++++++|+++++..++.++.++||.|+++.|+|..+...++..|.
T Consensus 80 ~~~~~g~~~~~------~~l~~~la~~~g----~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~ 149 (398)
T 3a2b_A 80 SRFLNGTLDIH------VELEEKLSAYVG----KEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFS 149 (398)
T ss_dssp BTTTTCCCHHH------HHHHHHHHHHHT----CSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSS
T ss_pred cCcccCCcHHH------HHHHHHHHHHhC----CCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCC
Confidence 34456666777 77777666 444 36899999999999999999999999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccC----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
+++.++. .|+++|++.+++ +++++++++|+||||.++| +++|.++|+++ |+++|+||+|+.+.++
T Consensus 150 ~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~---~~~l~~~~~~~-~~~li~De~~~~~~~~ 218 (398)
T 3a2b_A 150 KVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN---LPELTSIANEF-DAAVMVDDAHSLGVIG 218 (398)
T ss_dssp EEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHH-TCEEEEECTTTTTTSS
T ss_pred ceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC---HHHHHHHHHHc-CcEEEEECCCcccccC
Confidence 9999985 478999998875 7899999999999999999 99999999999 9999999999876553
Q ss_pred CCCccccccCCCCCCc-eEEEeccccccccccceeEEEEcChhHHHHHHhh-hhccccCCChHHHH-HHHHHhcccCCCh
Q 018665 159 PATHTSFASLPGMWER-TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-QSQFTSGASSISQK-AGVAALGLGYAGG 235 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~-~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~l~~~~~~~ 235 (352)
.. ..++.......++ +++++|+||.+|++| ||+++++++++.+... ......+.+.+.+. ++.++++. .
T Consensus 219 ~~-~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~----~ 290 (398)
T 3a2b_A 219 HK-GAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEI----I 290 (398)
T ss_dssp GG-GCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH----H
T ss_pred CC-CCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHH----H
Confidence 21 1222221111234 699999999998666 9999999999988764 22222334444554 55677765 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
++.++.+++++++++.+.+.|+++ |+.+..+. |+++|+.++... +..++.+.|.++ ||.+.+|..|
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-g~~~~~~~~~~~-----------~~~~l~~~l~~~-gi~v~~~~~~ 356 (398)
T 3a2b_A 291 QNEPEHIEKLWKNTDYAKAQLLDH-GFDLGATE-SPILPIFIRSNE-----------KTFWVTKMLQDD-GVFVNPVVSP 356 (398)
T ss_dssp HHCTHHHHHHHHHHHHHHHHHHHT-TCCBCSCC-SSEEEEECCCHH-----------HHHHHHHHHHHT-TEECEEECTT
T ss_pred hhCHHHHHHHHHHHHHHHHHHHhc-CCCcCCCC-CCEEEEEcCCHH-----------HHHHHHHHHHHC-CcEEEeeCCC
Confidence 446678889999999999999988 88877655 677889887532 577899999987 9999999877
Q ss_pred CC---CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 316 GD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 316 ~~---~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.. ++++|++++. +++++++++++|++++++++-
T Consensus 357 ~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~~ 394 (398)
T 3a2b_A 357 AVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAEV 394 (398)
T ss_dssp TSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 53 4799999997 999999999999999987754
No 82
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=3e-36 Score=274.81 Aligned_cols=313 Identities=12% Similarity=0.104 Sum_probs=237.2
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh----cCCCCEEEecCCCCCChHHHHHh
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l----~~~~~~vl~~~~~~~~~~~~~~~ 79 (352)
|.|..|.+++| +++++++.............-|.|+|+|+..++..+ .++||+|++++|+|..|...++.
T Consensus 83 Y~p~~G~p~lr------~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~ 156 (420)
T 4h51_A 83 YLPISGYQPFI------DEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKA 156 (420)
T ss_dssp CCCTTCCHHHH------HHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHH
T ss_pred CCCcCChHHHH------HHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHH
Confidence 99999999999 999999862222222233455889999887766654 46899999999999999999999
Q ss_pred cCCe-EEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 80 ADAT-PVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 80 ~g~~-v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
.|.+ +..++..+..++.+|.+.+.+.+. ++++++++++||||||..++.+++++|+++|+++ ++++|.|++|.++
T Consensus 157 aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~-~~~~~~D~~Y~~~ 235 (420)
T 4h51_A 157 AGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAK-HHQVFFDSAYQGY 235 (420)
T ss_dssp TTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTT
T ss_pred cCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-CceEeeehhhhhh
Confidence 9987 555555545667788888877763 5677888899999999999999999999999999 9999999999998
Q ss_pred ccCCCCccc--cccCCCCCCceEEEeccccccccccceeEEEEcChhHHH-------HHHhhhhccccCCChHHHHHHHH
Q 018665 156 IYAPATHTS--FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA-------ACNKIQSQFTSGASSISQKAGVA 226 (352)
Q Consensus 156 ~~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
.+++....+ ........++++++.|+||.++++|+|+||++++.+..+ .+....+....+++...+.++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~ 315 (420)
T 4h51_A 236 ASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHL 315 (420)
T ss_dssp TTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred ccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHH
Confidence 876532222 111222346789999999999999999999987654333 23334445556788889999998
Q ss_pred HhcccCCC---hHHHHHHHHHHHHHHHHHHHHhccc--C-CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 227 ALGLGYAG---GEVVSKMVKAFRERRDFLVKSFGEL--E-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 227 ~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~--~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
.+.+.... ...++..+++++++|+.+.+.|+++ + .|..+.++.|+|.|+.+ +.+ .++.
T Consensus 316 ~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gl---------------s~e-~v~~ 379 (420)
T 4h51_A 316 ILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGL---------------SKA-QCEY 379 (420)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCC---------------CHH-HHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCc---------------CHH-HHHH
Confidence 88863221 2345667788999999999999876 2 25666788999888754 333 3455
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
|. ++||++.+++ |||++. +++.+++++++|.++++++.+
T Consensus 380 L~-e~~Vy~~~~g--------Ris~Agl~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 380 CQ-NHNIFITVSG--------RANMAGLTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp HH-HTTEECCTTC--------EEEGGGCCHHHHHHHHHHHHHHHC----
T ss_pred HH-hCCEEEcCCC--------EEEeccCCHHHHHHHHHHHHHHHHHhhc
Confidence 65 5699998864 999997 999999999999999998765
No 83
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.2e-35 Score=266.23 Aligned_cols=295 Identities=15% Similarity=0.191 Sum_probs=240.7
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+.+++++. ..|.+ +++++++++|+++++..++.+++++||+|+++.|+|.+ +...++..|.+++.++.+. ++.+
T Consensus 56 ~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~ 132 (386)
T 2dr1_A 56 MDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP--GKAV 132 (386)
T ss_dssp HHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCC
T ss_pred HHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCC--CCCC
Confidence 66666665 44544 36789999999999999999999999999999999998 8889999999999999864 4568
Q ss_pred CHHHHHhhc--cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 98 DPKVLESKL--TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 98 d~~~l~~~l--~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|+++|++++ .+++++|++++|+||||.+.| +++|.++|+++ |+++|+|++|+.+.+ +.++. ..+.+
T Consensus 133 d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~~~~----~~~~~----~~~~d 200 (386)
T 2dr1_A 133 KPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEH-DKLVFVDAVSAMGGA----DIKFD----KWGLD 200 (386)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHT-TCEEEEECTTTBTTB----CCCTT----TTTCS
T ss_pred CHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHc-CCeEEEEccccccCc----ccccc----ccCCc
Confidence 999999999 468899999999999999999 99999999999 999999999986432 12221 13567
Q ss_pred EEEeccccccccccceeEEEEcChhHHHHHH----------------hh--hhccccCCChHHHHHHHHHhcccCCChH-
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACN----------------KI--QSQFTSGASSISQKAGVAALGLGYAGGE- 236 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~----------------~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 236 (352)
+++.|+||.++.+ .++|++++++++++.+. .. .....++++.+.+.++.++++. ..+
T Consensus 201 i~~~s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~ 276 (386)
T 2dr1_A 201 VVFSSSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRI---IEKM 276 (386)
T ss_dssp EEEEETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHH---HHHT
T ss_pred EEEEeccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH---HHHh
Confidence 9999999999744 35899999999888763 12 1244557888889888888875 122
Q ss_pred -HHHHHHHHHHHHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 237 -VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 237 -~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
.+++++++++++++++.+.|+++ |+.+..+. .+.++++.++... +..++.++|.++ ||.+.+|
T Consensus 277 g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~-gi~v~~~ 343 (386)
T 2dr1_A 277 GGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTPPGI-----------KGDEVYEAMRKR-GFELAKG 343 (386)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECCTTC-----------CHHHHHHHHHHT-TEECEEC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcCCCC-----------CHHHHHHHHHHC-CeEEecC
Confidence 36788899999999999999988 88877654 3667888887432 688999999987 9999998
Q ss_pred CCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 313 DAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
..+..++++|++++. +++++++++++|++++++++
T Consensus 344 ~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 344 YGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp CGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 866567899999995 99999999999999998764
No 84
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=5.1e-35 Score=266.03 Aligned_cols=296 Identities=18% Similarity=0.164 Sum_probs=231.2
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEecCCCCCChHHHH---HhcC
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIAD 81 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~~~~vl~~~~~~~~~~~~~---~~~g 81 (352)
+..+++ +.++++++ +++++|++++|+++++..++.++. ++||+|+++.|+|+++...+ +..|
T Consensus 45 ~~~~l~------~~la~~~g-----~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g 113 (384)
T 1eg5_A 45 HMEKAR------EKVAKVLG-----VSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKG 113 (384)
T ss_dssp HHHHHH------HHHHHHHT-----SCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTT
T ss_pred HHHHHH------HHHHHHcC-----CCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcC
Confidence 345677 99999986 667899999999999999999987 78999999999999887655 7789
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC--EEEEecccccccccCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR--LLVLSDEIYEHIIYAP 159 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~--~~livD~~~~~~~~~~ 159 (352)
.+++.++++. ++.+|+++|++++++++++|++++|+||||.++| +++|.++|+++ | +++|+||+|+. +
T Consensus 114 ~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~-~~~~~li~Dea~~~----~ 183 (384)
T 1eg5_A 114 FKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQP---VEDVTRIVKKK-NKETLVHVDAVQTI----G 183 (384)
T ss_dssp CEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHH-CTTCEEEEECTTTT----T
T ss_pred CEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCCCCcccccC---HHHHHHHHHhc-CCceEEEEEhhhhc----C
Confidence 9999999863 4568999999999889999999999999999999 89999999999 9 99999999973 2
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhH--HHHHHhh---hhccccCCChHHHHHHHHHhcccCCC
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF--VAACNKI---QSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
..+.++.. .+.++++.|+||.+|++| +||+++++++ .+.+... .....++++.+.+.++.++++. .
T Consensus 184 ~~~~~~~~----~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~ 254 (384)
T 1eg5_A 184 KIPFSLEK----LEVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI---A 254 (384)
T ss_dssp TSCCCCTT----TCCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH---H
T ss_pred CcccCchh----cCCCEEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHH---H
Confidence 21222221 246699999999988667 7999998875 2222111 1123457888899888888875 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
.+++++.+++++++++++.+.|++ +++.+..+. .+.++++.+++. +..++.+.|.+ .||.+.+
T Consensus 255 ~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~-~gi~v~~ 320 (384)
T 1eg5_A 255 VEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPNI------------RGSTLQNLLSG-YGIYVST 320 (384)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTTC------------CHHHHHHHHHH-TTEECBC
T ss_pred HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCCC------------CHHHHHHHHhh-CCeEEec
Confidence 356788899999999999999998 588876553 233466666642 67889988875 5999999
Q ss_pred CCCCCC-------------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 312 GDAFGD-------------------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 312 g~~~~~-------------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
|..|+. ++++||+++. +++++++++++|++++++++.
T Consensus 321 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp ------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred cccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 876642 3689999994 899999999999999988765
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=6.1e-35 Score=266.58 Aligned_cols=292 Identities=14% Similarity=0.156 Sum_probs=235.9
Q ss_pred HHHHHHHH-hcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLK-ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+++++. ..| .+++ +|++++|+++++..++.+++++||+|+++.|+|.+ +...++..|.+++.++++. ++.
T Consensus 70 ~~~~~~la~~~g--~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~ 145 (393)
T 1vjo_A 70 DEIQSLLRYVWQ--TENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPW--GEV 145 (393)
T ss_dssp HHHHHHHHHHHT--CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCC
T ss_pred HHHHHHHHHHhC--CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCC--CCC
Confidence 55555555 344 3567 89999999999999999999999999999999998 8889999999999999874 456
Q ss_pred cCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
+|+++|++.+++ +++++++++|+||||.+.| +++|.++|+++ |+++|+||+|+. +..+..+ . ..+.+
T Consensus 146 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~----g~~~~~~---~-~~~~d 213 (393)
T 1vjo_A 146 FSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREF-GTLLLVDTVTSL----GGVPIFL---D-AWGVD 213 (393)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH-TCEEEEECTTTT----TTSCCCT---T-TTTCS
T ss_pred CCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHc-CCEEEEECCccc----cCcCCcc---c-ccCcc
Confidence 899999999987 8999999999999999999 89999999999 999999999983 2222222 1 23567
Q ss_pred EEEeccccccccccceeEEEEcChhHHHHHHhh----h---------------hcccc-CCChHHHHHHHHHhcccCCCh
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI----Q---------------SQFTS-GASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~----~---------------~~~~~-~~~~~~~~~~~~~l~~~~~~~ 235 (352)
+++.|+||.++.++ |+|++++++++++.+... . ..+.. +++.+.+.++.++++.. ..
T Consensus 214 i~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~--~~ 290 (393)
T 1vjo_A 214 LAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLI--AQ 290 (393)
T ss_dssp EEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH--HH
T ss_pred EEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHH--HH
Confidence 99999999998566 999999999998887532 0 02223 67888898888888751 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCC---ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
.++++++++++++++++.+.|+++ |+++..+.+ +.++++.+|... +..++.+.|.+++||.+.+|
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gi~v~~g 358 (393)
T 1vjo_A 291 EGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIPDGV-----------DGKAVARRLLNEHNIEVGGG 358 (393)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCTTC-----------CHHHHHHHHHHHHCEECEEC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcCCCC-----------CHHHHHHHHHhhCCEEEecC
Confidence 347788899999999999999988 888876653 345777776432 67889999987669999999
Q ss_pred CCCCCCCeEEEEe-ec--CHHHHHHHHHHHHHHH
Q 018665 313 DAFGDDTCIRISY-AA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 313 ~~~~~~~~iRi~~-~~--~~~~l~~~~~~l~~~~ 343 (352)
..+..++++||++ +. +++++++++++|++++
T Consensus 359 ~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 359 LGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp CGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 8777789999995 32 6778999999999876
No 86
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=9.4e-35 Score=266.23 Aligned_cols=297 Identities=15% Similarity=0.201 Sum_probs=233.2
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCC-CCCcEEEeCChHHHHHHHHHHh----cCCCCEEEecCCCCCChH----HHH
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSY-TPDQILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVSYP----EMA 77 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~l----~~~~~~vl~~~~~~~~~~----~~~ 77 (352)
..+..+++ +.++++++ . ++++|++++|+++++..++.++ +++||+|+++.|+|++.. ..+
T Consensus 66 ~~~~~~l~------~~la~~~~-----~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~ 134 (406)
T 1kmj_A 66 TEKMENVR------KRASLFIN-----ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLC 134 (406)
T ss_dssp HHHHHHHH------HHHHHHTT-----CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHH
T ss_pred HHHHHHHH------HHHHHHcC-----CCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHH
Confidence 34456677 99999886 3 4689999999999999999999 889999999999998654 346
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
+..|.+++.++++. ++.+|+++|++++++++++|++++|+||||.++| +++|.++|+++ |+++|+|++|+...
T Consensus 135 ~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~~~~~g~- 207 (406)
T 1kmj_A 135 ARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMITLAHQH-GAKVLVDGAQAVMH- 207 (406)
T ss_dssp HHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHT-TCEEEEECTTTTTT-
T ss_pred HhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeEEEEeCCCccccCcCC---HHHHHHHHHHc-CCEEEEEchhhcCC-
Confidence 77899999999873 4568999999999989999999999999999999 99999999999 99999999998632
Q ss_pred CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh---------------------ccccCC
Q 018665 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS---------------------QFTSGA 216 (352)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~---------------------~~~~~~ 216 (352)
.+..+.. .+.++++.|+||.+|.+| +|++++++++++.+..... .+..++
T Consensus 208 ---~~~~~~~----~~~d~~~~s~~K~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (406)
T 1kmj_A 208 ---HPVDVQA----LDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGT 278 (406)
T ss_dssp ---SCCCHHH----HTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSS
T ss_pred ---CCCcccc----cCCCEEEEEchhccCCCC--cEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCC
Confidence 1112211 245699999999998666 8999999998887754321 112234
Q ss_pred ChHHHHHHH-HHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC--CCceEEEeecCCccCCcccCCCCCCC
Q 018665 217 SSISQKAGV-AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFYLFIDFSTYYGSEAEGFGKIEN 293 (352)
Q Consensus 217 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
+.+.+.++. ++++.. ...+++++.++++++++++.+.|++++++.+..+ .++++. +.+++. +
T Consensus 279 ~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~------------~ 343 (406)
T 1kmj_A 279 PNTGGIIGLGAALEYV--SALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIA-FNLGKH------------H 343 (406)
T ss_dssp CCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEE-EEETTC------------C
T ss_pred CCHHHHHHHHHHHHHH--HHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEE-EEECCC------------C
Confidence 555555444 555431 1235678888899999999999999888988877 566644 456532 6
Q ss_pred hHHHHHHHHHccCEEeccCCCC--------CCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 294 SESLCRYLLDKAQVALVPGDAF--------GDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 294 ~~~~~~~l~~~~gi~i~~g~~~--------~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
..++.+.|.++ ||.+.+|..| +.++++|++++. +++|++++++.|+++++.+
T Consensus 344 ~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 344 AYDVGSFLDNY-GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp HHHHHHHHHHT-TEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhC-CcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 77888887765 9999998754 336899999997 8999999999999998765
No 87
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.2e-34 Score=263.95 Aligned_cols=299 Identities=17% Similarity=0.212 Sum_probs=234.0
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCC-CCCcEEEeCChHHHHHHHHHHh----cCCCCEEEecCCCCCC----hHHHHH
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSY-TPDQILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVS----YPEMAR 78 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~l----~~~~~~vl~~~~~~~~----~~~~~~ 78 (352)
.+..+++ +.++++++ . +++++++++|+++++..++.++ .++||+|+++.|+|.+ +...++
T Consensus 72 ~~~~~l~------~~la~~~~-----~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~ 140 (420)
T 1t3i_A 72 DAYEAVR------NKVAKFIN-----ARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAA 140 (420)
T ss_dssp HHHHHHH------HHHHHHTT-----CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHH
T ss_pred HHHHHHH------HHHHHHcC-----CCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHH
Confidence 4456677 99999986 3 4689999999999999999999 8899999999999998 456777
Q ss_pred hcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 79 IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 79 ~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
..|.+++.++++ .++.+|+++|++++++++++|++++|+||||.++| +++|.++|+++ |+++|+|++|+...
T Consensus 141 ~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~~~-- 212 (420)
T 1t3i_A 141 KTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQLAHQA-GAKVLVDACQSAPH-- 212 (420)
T ss_dssp HHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHT-TCEEEEECTTTTTT--
T ss_pred hcCcEEEEeccC--CCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCC---HHHHHHHHHHc-CCEEEEEhhhccCC--
Confidence 889999999986 45568999999999989999999999999999999 99999999999 99999999998532
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhc--------------------cccCCCh
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--------------------FTSGASS 218 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~--------------------~~~~~~~ 218 (352)
....+.. .+.++++.|+||.+|.+| +|++++++++++.+...... +..+.+.
T Consensus 213 --~~~~~~~----~~~di~~~s~sK~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (420)
T 1t3i_A 213 --YPLDVQL----IDCDWLVASGHKMCAPTG--IGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPA 284 (420)
T ss_dssp --SCCCHHH----HTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCC
T ss_pred --ccCchhh----cCCCEEEEehhhhcCCCc--eEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCcc
Confidence 1112222 245689999999887555 89999999988877544221 1224555
Q ss_pred HHHHHHHH-HhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC-----CceEEEeecCCccCCcccCCCCCC
Q 018665 219 ISQKAGVA-ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIE 292 (352)
Q Consensus 219 ~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
+.+.++.. +++.. ...+++++.++++++++++.+.|++++++++..+. .+.++++.+++.
T Consensus 285 ~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------ 350 (420)
T 1t3i_A 285 IAEAIALGAAVDYL--TDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGL------------ 350 (420)
T ss_dssp HHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTB------------
T ss_pred HHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCC------------
Confidence 55555443 44430 12246788889999999999999998888887664 244455567642
Q ss_pred ChHHHHHHHHHccCEEeccCCCC--------CCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 293 NSESLCRYLLDKAQVALVPGDAF--------GDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~--------~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+..++.+.|.+ .||.+.+|..| +.++++|++++. ++++++++++.|+++++.++.
T Consensus 351 ~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 351 HASDVATMVDQ-DGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CHHHHHHHHHT-TTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHH-CCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 67788887765 49999998543 336899999997 899999999999999988754
No 88
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=3.3e-34 Score=261.56 Aligned_cols=294 Identities=13% Similarity=0.109 Sum_probs=231.9
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCCh--HHHHHhcCCeEEEecccCCCCcccC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~--~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
+.++++++ .++++|++|+|+++++..++.++.++||+|+++.|+|+++ ...++..|.+++.++++.+ +.+|
T Consensus 49 ~~la~~~g-----~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d 121 (392)
T 2z9v_A 49 DKAQKAMR-----LSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAID 121 (392)
T ss_dssp HHHHHHTT-----CSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCC
T ss_pred HHHHHHhC-----CCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCC
Confidence 88888876 5568999999999999999999999999999999999875 3455668999999998743 4589
Q ss_pred HHHHHhhcc--CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 99 PKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 99 ~~~l~~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
+++|+++++ +++++|++++|+||||.++| +++|.++|+++ |+++|+|++|+. +..+..+.. .+.++
T Consensus 122 ~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~----g~~~~~~~~----~~~d~ 189 (392)
T 2z9v_A 122 PQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDAIGALVSAH-GAYLIVDAVSSF----GGMKTHPED----CKADI 189 (392)
T ss_dssp HHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHHHHHHHHHT-TCEEEEECTTTB----TTBSCCGGG----GTCSE
T ss_pred HHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHHHHHHHHHc-CCeEEEEccccc----CCccccccc----ccceE
Confidence 999999994 57899999999999999999 89999999999 999999999974 221222222 23558
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHhhh--------------------hccccCCChHHHHHHHHHhcccCCChH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ--------------------SQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
++.|+||+++ ++.++|++++++++++.+.... .....+++...+.++.++++. ..+
T Consensus 190 ~~~s~sK~~~-~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~ 265 (392)
T 2z9v_A 190 YVTGPNKCLG-APPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDL---YLN 265 (392)
T ss_dssp EEECSSSTTC-CCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHH---HHH
T ss_pred EEecCccccc-CCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HHh
Confidence 9999999764 3345699999999988876421 122345666666666667654 123
Q ss_pred H-HHHHHHHHHHHHHHHHHHhcccCCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 237 V-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 237 ~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
. +++++++++++++++.+.|+++ |+.+..+. .+.++++.+++.. +..++.+.|.+++||.+.+
T Consensus 266 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~~gi~v~~ 333 (392)
T 2z9v_A 266 EGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDGV-----------DEKALRQAARARYGVVFSS 333 (392)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCEECEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECCCCC-----------CHHHHHHHHHhcCCEEEec
Confidence 3 6788889999999999999887 88777623 4666788886432 6788999998766999999
Q ss_pred CCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHhhhCCC
Q 018665 312 GDAFGDDTCIRISY-A--ASLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 312 g~~~~~~~~iRi~~-~--~~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
|..+..++++|+++ + .+++++++++++|++++++++.+
T Consensus 334 g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 374 (392)
T 2z9v_A 334 GRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAGRK 374 (392)
T ss_dssp CCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcCCC
Confidence 87666678999995 5 39999999999999999887654
No 89
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=2.2e-34 Score=262.43 Aligned_cols=294 Identities=19% Similarity=0.171 Sum_probs=230.4
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHH----HHhcCC
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEM----ARIADA 82 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~----~~~~g~ 82 (352)
.+..+++ +.++++++ .++++|++++|+++++..++.++ .++||+|+++.|+|.++... ++..|.
T Consensus 59 ~~~~~l~------~~la~~~g-----~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~ 127 (390)
T 1elu_A 59 QLIAQLR------QALAETFN-----VDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGI 127 (390)
T ss_dssp HHHHHHH------HHHHHHTT-----SCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHH------HHHHHHcC-----CCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCc
Confidence 4556677 99999886 66779999999999999999999 88999999999999987654 467799
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHH----hCCCEEEEecccccccccC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVA----KHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~----~~~~~~livD~~~~~~~~~ 158 (352)
+++.++++.+.++.+|+++|++.+++++++|++++|+||||.++| +++|.++|+ ++ |+++|+|++|+..
T Consensus 128 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~-~~~li~Dea~~~g--- 200 (390)
T 1elu_A 128 TYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNY-PVRVLVDGAQSAG--- 200 (390)
T ss_dssp EEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSS-CCEEEEECTTTBT---
T ss_pred EEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecC---HHHHHHHHhhhhhhc-CcEEEEEcccccC---
Confidence 999999864345678999999999889999999999999999999 999999999 99 9999999999842
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh----------------------hhccccCC
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI----------------------QSQFTSGA 216 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~----------------------~~~~~~~~ 216 (352)
..+..+ . ..+.++++.|++|.++ +|.++|++++++++++.+... ......++
T Consensus 201 -~~~~~~---~-~~~~d~~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (390)
T 1elu_A 201 -SLPLDF---S-RLEVDYYAFTGHKWFA-GPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATS 274 (390)
T ss_dssp -TBCCCT---T-TSCCSEEEEESSSTTC-CCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCC
T ss_pred -CcCCCh---h-hcCCCEEEcccccccc-CCCceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCC
Confidence 222221 1 1355699999999554 566799999999887766432 12223456
Q ss_pred ChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC---CCceEEEeecCCccCCcccCCCCCCC
Q 018665 217 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIEN 293 (352)
Q Consensus 217 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
+...+.++.++++... ..++++++.++++++++++.+.|++++|+++..+ .+++ ++++++... +
T Consensus 275 ~~~~~~a~~~al~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~-~~~~~~~~~-----------~ 341 (390)
T 1elu_A 275 AYPQYAGLLAALQLHQ-RQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGL-VSFTVDSPL-----------G 341 (390)
T ss_dssp CHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSE-EEEEECSSS-----------C
T ss_pred CHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccE-EEEEcCCCC-----------C
Confidence 7777777766665310 0224788889999999999999998888888743 4555 445776331 6
Q ss_pred hHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 294 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 294 ~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
..++.+.|.++ ||.+.+|. .++++||+++. +++++++++++|+++
T Consensus 342 ~~~~~~~l~~~-gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 342 HRAIVQKLEEQ-RIYLRTIA---DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp HHHHHHHHHHT-TEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHC-CEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 78899998765 99999875 46899999964 899999999998754
No 90
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.2e-33 Score=257.04 Aligned_cols=291 Identities=12% Similarity=0.142 Sum_probs=232.6
Q ss_pred HHHHHHHHhcCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTP--DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .+. ++|++++|+++++. ++.+++++||+|+++.++|++ +...++..|.+++.++++. ++.
T Consensus 42 ~~la~~~~-----~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~ 113 (384)
T 3zrp_A 42 KGLRYVMG-----ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDY 113 (384)
T ss_dssp HHHHHHHT-----CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCST--TCC
T ss_pred HHHHHHhC-----CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCC--CCC
Confidence 77777775 445 88999999999999 999999999999999999965 5567788999999999874 446
Q ss_pred cCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
+|+++|++++++ +++++++++|+||||.++| +++|.++|+++ |+++|+|++++... ....+. ..+.+
T Consensus 114 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~~~----~~~~~~----~~~~d 181 (384)
T 3zrp_A 114 VKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY-VELIVVDGVSSVGA----EEVKAE----EWNVD 181 (384)
T ss_dssp CCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG-EEEEEEECTTTTTT----SCCCTT----TTTCS
T ss_pred CCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc-CCEEEEECcccccC----cccccc----ccCCC
Confidence 899999999987 8999999999999999999 89999999999 99999999987521 112221 13456
Q ss_pred EEEeccccccccccceeEEEEcChhHHHHH-------------Hhhh---------hccc-cCCChHHHHHHHHHhcccC
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-------------NKIQ---------SQFT-SGASSISQKAGVAALGLGY 232 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~-------------~~~~---------~~~~-~~~~~~~~~~~~~~l~~~~ 232 (352)
+++.|+||.++ ++.++|++++++++++.+ .... .... .+++...+.++.++++..
T Consensus 182 ~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~- 259 (384)
T 3zrp_A 182 VYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLI- 259 (384)
T ss_dssp EEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH-
T ss_pred EEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHH-
Confidence 99999999986 445699999999988876 2221 1111 256777777776777641
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
....+++++++++++++++.+.|+++ ++.+..+. .+.++++.+++. +..++.+.|.++ ||.
T Consensus 260 -~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~-gi~ 324 (384)
T 3zrp_A 260 -EKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKVA------------DPQKVLAGTVNE-GVE 324 (384)
T ss_dssp -HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSSS------------CHHHHHHHHHTT-TCC
T ss_pred -HhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCCC------------CHHHHHHHHHHC-CEE
Confidence 12337888899999999999999988 88887665 466778888763 788999999876 999
Q ss_pred eccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 309 LVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 309 i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
+.+|..+.. +++|+++.. +++++++++++|++++++++..
T Consensus 325 v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 366 (384)
T 3zrp_A 325 FAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEP 366 (384)
T ss_dssp CEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred EecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 998864333 899999885 8899999999999999987653
No 91
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.1e-33 Score=258.28 Aligned_cols=300 Identities=13% Similarity=0.150 Sum_probs=234.9
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCCh--HHHHHhcCCeEE
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPV 85 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~--~~~~~~~g~~v~ 85 (352)
...+++ +.++++++ .+++ +|++++|+++++..++.+++++||+|+++.|+|+++ ...++..|.+++
T Consensus 53 ~~~~l~------~~la~~~g-----~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 121 (393)
T 2huf_A 53 IMDDIK------EGVRYLFQ-----TNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVR 121 (393)
T ss_dssp HHHHHH------HHHHHHHT-----CCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHH------HHHHHHhC-----CCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeE
Confidence 345566 88888886 5554 899999999999999999999999999999999874 345677899999
Q ss_pred EecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 86 ILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
.++++. ++.+|+++|++++++ ++++|++++|+||||.++| +++|.++|+++ |+++|+|++++. +..+..
T Consensus 122 ~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~-~~~li~D~a~~~----~~~~~~ 191 (393)
T 2huf_A 122 VVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG---LEGVGALCHQH-NCLLIVDTVASL----GGAPMF 191 (393)
T ss_dssp EEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT-TCEEEEECTTTB----TTBCCC
T ss_pred EEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCccccCC---HHHHHHHHHHc-CCEEEEEccccc----CCCCcc
Confidence 999864 346899999999987 8999999999999999999 89999999999 999999999764 221122
Q ss_pred cccCCCCCCceEEEecccccc-ccccceeEEEEcChhHHHHHHhhh----h-------------------ccccCCChHH
Q 018665 165 FASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQ----S-------------------QFTSGASSIS 220 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~-g~~g~~~g~l~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~ 220 (352)
+ . ..+.++++.|+||++ |++| +|++++++++++.+.... . ....+++...
T Consensus 192 ~---~-~~~~d~~~~s~sK~l~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (393)
T 2huf_A 192 M---D-RWEIDAMYTGSQKVLGAPPG--ITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTL 265 (393)
T ss_dssp T---T-TTTCSEEECCSSSTTCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHH
T ss_pred h---h-hcCccEEEECCCcccccCCC--eEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHH
Confidence 1 1 135679999999986 4455 499999999998886541 0 1113456666
Q ss_pred HHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHH
Q 018665 221 QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESL 297 (352)
Q Consensus 221 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
+.++.++++.. ....+++..++++++++++.+.|+++ |+.+..+. .++++++.++... +..++
T Consensus 266 ~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 331 (393)
T 2huf_A 266 LYGLREAIAMA--CEEGLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQGV-----------DWLKA 331 (393)
T ss_dssp HHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTTC-----------CHHHH
T ss_pred HHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcCCCC-----------CHHHH
Confidence 66666677641 01237788889999999999999988 88877653 3556778876432 67889
Q ss_pred HHHHHHccCEEeccCCCCCCCCeEEEEe-ec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 298 CRYLLDKAQVALVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 298 ~~~l~~~~gi~i~~g~~~~~~~~iRi~~-~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
.+.|.+++||.+.+|..+..++++||++ +. +++++++++++|++++++++..
T Consensus 332 ~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 386 (393)
T 2huf_A 332 AQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKPD 386 (393)
T ss_dssp HHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 9999876699999988776688999999 53 6789999999999999988764
No 92
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=6.8e-34 Score=259.87 Aligned_cols=299 Identities=14% Similarity=0.137 Sum_probs=238.7
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEE
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVI 86 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~~-~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~ 86 (352)
..++| +.++++++ .+++ +|++++|+++++..++.+++++||+|+++.|+|.++. ..++..|.+++.
T Consensus 53 ~~~l~------~~la~~~~-----~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 121 (396)
T 2ch1_A 53 MDEVK------DGLRYIFQ-----TENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRT 121 (396)
T ss_dssp HHHHH------HHHHHHHT-----CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHH------HHHHHHhC-----CCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEE
Confidence 55677 99999997 5566 8999999999999999999999999999999999885 477889999999
Q ss_pred ecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 87 LPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
++++. ++.+|+++|++++++ ++++|++++|+||||.++| +++|.++|+++ |+++|+||+|+. +..+..+
T Consensus 122 v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~-~~~li~Dea~~~----g~~~~~~ 191 (396)
T 2ch1_A 122 IEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQH-DCLLIVDAVASL----CGVPFYM 191 (396)
T ss_dssp EECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT-TCEEEEECTTTB----TTBCCCT
T ss_pred ecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHHc-CCEEEEEccccc----cCCccch
Confidence 99863 456899999999987 8999999999999999999 88999999999 999999999883 2222222
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh-----------------------hccccCCChHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-----------------------SQFTSGASSISQK 222 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~ 222 (352)
.. .+..+++.|++|.++ ++.++|++++++++++.+.... .....+++...+.
T Consensus 192 ~~----~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (396)
T 2ch1_A 192 DK----WEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIF 266 (396)
T ss_dssp TT----TTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHH
T ss_pred hh----cCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHH
Confidence 11 233477899999876 4456799999998888765310 1122456777888
Q ss_pred HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCC----ceEEEeecCCccCCcccCCCCCCChHHHH
Q 018665 223 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
++.++++.. ..+++++++++++++++++.+.|+++ |+++..+.+ +.++++.++... +..++.
T Consensus 267 a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 332 (396)
T 2ch1_A 267 ALREALAQI--AEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV-----------DWWKVS 332 (396)
T ss_dssp HHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTTC-----------CHHHHH
T ss_pred HHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCCceEEEEcCCCC-----------CHHHHH
Confidence 888887641 12457788899999999999999988 888876654 236778876432 788999
Q ss_pred HHHHHccCEEeccCCCCCCCCeEEEEe-ec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 299 RYLLDKAQVALVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~~~~~~iRi~~-~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+.|.+++||.+.+|..+..++++||++ +. +++++++++++|+++++++++
T Consensus 333 ~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 333 QYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp HHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 999876699999987666678999999 43 789999999999999988765
No 93
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=1.2e-33 Score=259.38 Aligned_cols=294 Identities=14% Similarity=0.127 Sum_probs=236.3
Q ss_pred HHHHHHHHhcCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLKENGLSYTPDQ-ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~-i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+.++++++ .+.++ +++++|+++++..++.+++++||+|+++.|+|++ +...++..|.+++.++++ .++.+
T Consensus 53 ~~la~~~~-----~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~ 125 (411)
T 3nnk_A 53 ALYRGVFR-----TENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVF 125 (411)
T ss_dssp HHHHHHHT-----CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCC
T ss_pred HHHHHHhC-----CCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCC
Confidence 77777775 44444 8899999999999999999999999999999987 888999999999999986 44568
Q ss_pred CHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 98 DPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 98 d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|+++|++++++ ++++|++++|+||||.+.| +++|.++|+++ |+++|+|++++.. ..+..+. ..+.++
T Consensus 126 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~~----~~~~~~~----~~~~d~ 193 (411)
T 3nnk_A 126 TPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRRY-DALFYTDATASLG----GNPLETD----VWGLDA 193 (411)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH-TCEEEEECTTTBT----TBCCCTT----TTTCSE
T ss_pred CHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHHc-CCEEEEECCcccC----Ccccchh----ccCCcE
Confidence 99999999986 8999999999999999999 88999999999 9999999997642 1112211 134569
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHhhh------------------------------------hccccCCChHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------------------------------------SQFTSGASSIS 220 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~ 220 (352)
++.|++|+++ ++.++|++++++++++.+.... .....+++...
T Consensus 194 ~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (411)
T 3nnk_A 194 VSAGMQKCLG-GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTA 272 (411)
T ss_dssp EECCSTTTTC-CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHH
T ss_pred EEecCccccC-CCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHH
Confidence 9999999864 4457899999999998887542 11234567777
Q ss_pred HHHHHHHhcccCCChHH-HHHHHHHHHHHHHHHHHHhcccCCceecCCCC---ceEEEeecCCccCCcccCCCCCCChHH
Q 018665 221 QKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 221 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
+.++.++++. ..+. ++++.++++++++++.+.|+++ ++.+..+.. +.++++.+|+.. +..+
T Consensus 273 ~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 337 (411)
T 3nnk_A 273 LFGARECARL---ILQEGLDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGI-----------NGDQ 337 (411)
T ss_dssp HHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTC-----------CHHH
T ss_pred HHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCC-----------CHHH
Confidence 7777777764 1233 7888899999999999999987 887775543 667888887532 7889
Q ss_pred HHHHHHHccCEEeccCCCCCCCCeEEEEe-ec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 297 LCRYLLDKAQVALVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~~~~~~~~iRi~~-~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
+.+.|.+++||.+.+|.....++++||++ +. +++++++++++|+++++++...
T Consensus 338 l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 393 (411)
T 3nnk_A 338 ARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKFP 393 (411)
T ss_dssp HHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 99999877799999886555678999998 54 7899999999999999887653
No 94
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=6e-34 Score=260.40 Aligned_cols=297 Identities=16% Similarity=0.126 Sum_probs=232.3
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEE
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
.....+++ +.++++++ .++.| ++++|++++..++.+++++||.|+++.|+|.++...++..|.+++.
T Consensus 87 ~~~~~~l~------~~la~~~~------~~~~i-~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~ 153 (399)
T 3tqx_A 87 QTIHKELE------KDISEFLG------TDDTI-LYSSCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYR 153 (399)
T ss_dssp BHHHHHHH------HHHHHHHT------CSEEE-EESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEE
T ss_pred chHHHHHH------HHHHHHHC------CCcEE-EECchHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeE
Confidence 34456777 99999885 23444 4455688999999999999999999999999999999999999999
Q ss_pred ecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 87 LPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
++. .|++.|++.+++ +++++++++|+||||.++| +++|.++|+++ |+++|+||+|+...+ +.
T Consensus 154 ~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~-~~ 221 (399)
T 3tqx_A 154 YKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD---LKSICDLADKY-NALVMVDDSHAVGFI-GE 221 (399)
T ss_dssp ECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC---HHHHHHHHHHT-TCEEEEECTTTTTTS-ST
T ss_pred eCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CCEEEEECCcccccc-CC
Confidence 985 367788887764 7899999999999999999 99999999999 999999999963222 22
Q ss_pred CccccccC-CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh--ccccCCChHHHHHHHHHhcccCCChHH
Q 018665 161 THTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 161 ~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
...+.... ....+.+++++|+||.+| |++.||+++++++++.+..... .++.+++++.+.++.++++. ..++
T Consensus 222 ~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~ 296 (399)
T 3tqx_A 222 NGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLEL---LKTE 296 (399)
T ss_dssp TSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHH---HHHT
T ss_pred CCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHH---Hhhc
Confidence 11222221 111245699999999997 3455999999999998876533 23446788888888888875 1256
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG- 316 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~- 316 (352)
.++.+++++++++++.+.|+++ |+.+..+. +.++|+.++... +..++.+.|.++ ||.+.++..+.
T Consensus 297 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~l~~~-gi~v~~~~~~~~ 362 (399)
T 3tqx_A 297 GPQLRKQLQENSRYFRAGMEKL-GFQLVPGN-HPIIPVMLGDAQ-----------LATNMADHLLQE-GIYVVGFSYPVV 362 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCBCCCS-SSEEEEEEECHH-----------HHHHHHHHHHHT-TEECCEECTTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHc-CCCcCCCC-CCEEEEEeCCHH-----------HHHHHHHHHHHC-CCEEeeeCCCCC
Confidence 7888999999999999999988 88877544 455777876532 577899999976 99999865442
Q ss_pred --CCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 317 --DDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 317 --~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
.++++|++++. +++++++++++|+++++++.
T Consensus 363 ~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 363 PMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 23689999983 89999999999999998764
No 95
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=5e-34 Score=256.52 Aligned_cols=294 Identities=13% Similarity=0.061 Sum_probs=231.5
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEEe
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVIL 87 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~i 87 (352)
..++| +.++++++ .+++++++++|+++++..++.++.++||+|+++.|+|+++. ..++..|.+++.+
T Consensus 36 ~~~l~------~~la~~~g-----~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v 104 (352)
T 1iug_A 36 FLKAR------GLLREAFR-----TEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERL 104 (352)
T ss_dssp HHHHH------HHHHHHHT-----CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHH------HHHHHHhC-----CCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHHHHHHHHHcCCceEEE
Confidence 45666 99999986 55689999999999999999999999999999999999865 5567789999999
Q ss_pred cccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-CEEEEecccccccccCCCCccccc
Q 018665 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-RLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 88 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~-~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
+++. ++.+|++++++ ++++++++++|+||||.++| +++|.++|+++| |+++|+|++|+. +..+..+.
T Consensus 105 ~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~----~~~~~~~~ 172 (352)
T 1iug_A 105 DYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTSL----LVGEVALE 172 (352)
T ss_dssp ECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTTB----TTBCCCSG
T ss_pred eCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCccc----cCcceecc
Confidence 9864 34578888877 57899999999999999999 889999999874 799999999874 22111221
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHH---------HH----hh-hhccccCCChHHHHHHHHHhcccC
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA---------CN----KI-QSQFTSGASSISQKAGVAALGLGY 232 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~---------~~----~~-~~~~~~~~~~~~~~~~~~~l~~~~ 232 (352)
. .+.++++.|+||+++ ++.++|++++++++++. +. .. ......+++...+.++.++++..
T Consensus 173 ~----~~~d~~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~- 246 (352)
T 1iug_A 173 A----MGVDAAASGSQKGLM-CPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEV- 246 (352)
T ss_dssp G----GTCSEEEEESSSTTC-CCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH-
T ss_pred c----cCeeEEEecCccccc-CCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHH-
Confidence 1 235588999999664 33458999999887654 22 11 12334567788887777777651
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC-CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
..++++.+++++++++++.+.|+++ |+.+..+. .+.++++.+++.. +..++.+.|.++ ||.+.+
T Consensus 247 --~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~-gi~v~~ 311 (352)
T 1iug_A 247 --LPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEGV-----------PYARVKEAFAQR-GAVIAG 311 (352)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTTC-----------CHHHHHHHHHTT-TEECEE
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCCC-----------CHHHHHHHHHHC-CEEEEe
Confidence 2337788899999999999999988 88887664 6667888887432 688899998876 999999
Q ss_pred CCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 312 GDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 312 g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
|.....++++|++++. +++++++++++|+++++++.
T Consensus 312 ~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 312 GQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp CCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 8755457899999996 78999999999999998764
No 96
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=8.9e-34 Score=259.57 Aligned_cols=296 Identities=15% Similarity=0.111 Sum_probs=234.4
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEE
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
..+..+++ +.++++++ .+ +.| ++++|++++..++.++.+++|.|+++.|+|.++...++..|.+++.
T Consensus 89 ~~~~~~l~------~~la~~~g-----~~-~~i-~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~ 155 (401)
T 1fc4_A 89 QDSHKELE------QKLAAFLG-----ME-DAI-LYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYR 155 (401)
T ss_dssp BHHHHHHH------HHHHHHHT-----CS-EEE-EESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEE
T ss_pred cHHHHHHH------HHHHHHhC-----CC-cEE-EeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEE
Confidence 45566777 99999986 33 445 5556678999899999999999999999999998999999999988
Q ss_pred ecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-cccc-C
Q 018665 87 LPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIY-A 158 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~-~ 158 (352)
++. .|++.|++.+++ ++++|++++|+||||.++| +++|.++|+++ |+++|+||+|+ ++.+ +
T Consensus 156 ~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~-~~~li~De~~~~g~~~~~ 224 (401)
T 1fc4_A 156 YAN-------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN---LKGVCDLADKY-DALVMVDDSHAVGFVGEN 224 (401)
T ss_dssp ECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC---HHHHHHHHHHT-TEEEEEECTTTTTTSSTT
T ss_pred ECC-------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC---HHHHHHHHHHc-CCEEEEECcccccccCCC
Confidence 873 378889888864 7899999999999999999 99999999999 99999999996 6542 3
Q ss_pred CCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh--ccccCCChHHHHHHHHHhcccCCChH
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
+....+...+. .+.++++.|+||.++ ++. .||+++++++++.+..... .++.+++++.+.++.++++. ..
T Consensus 225 g~~~~~~~~~~--~~~di~~~s~sK~~~-~~~-gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~ 296 (401)
T 1fc4_A 225 GRGSHEYCDVM--GRVDIITGTLGKALG-GAS-GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEM----VE 296 (401)
T ss_dssp SCCHHHHTTCT--TCCSEEEEESSSTTC-SSS-CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHH----HH
T ss_pred CCccHHHcCCC--cCCcEEEecchhhcc-CCC-CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHH----Hh
Confidence 33222222222 245699999999993 222 3999999999998876542 23557899999999888875 22
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
..++.+++++++++++.+.|+++ ++++. +..+.++|+++++.. +..++.+.|.++ ||.+.++..++
T Consensus 297 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~-gi~v~~~~~~~ 362 (401)
T 1fc4_A 297 AGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGDAV-----------VAQKFARELQKE-GIYVTGFFYPV 362 (401)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEECHH-----------HHHHHHHHHHHT-TEECCEECTTS
T ss_pred cCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCChH-----------HHHHHHHHHHHC-CcEEeeecCCC
Confidence 24677888899999999999988 88776 566777888887531 577899998876 99999987765
Q ss_pred C---CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 317 D---DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 317 ~---~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
. .+++|++++. +++++++++++|++++++++.
T Consensus 363 ~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 399 (401)
T 1fc4_A 363 VPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGV 399 (401)
T ss_dssp SCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 3 3589999984 899999999999999988754
No 97
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=3.6e-33 Score=256.62 Aligned_cols=293 Identities=13% Similarity=0.153 Sum_probs=233.5
Q ss_pred HHHHHHHHhcCCCCCCCcEE-EeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLKENGLSYTPDQIL-VSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~-~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+.++++++ .++++++ +++|+++++..++.+++++||+|+++.|+|++ +...++..|.+++.++++. ++.+
T Consensus 51 ~~la~~~g-----~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~ 123 (416)
T 3isl_A 51 EMLRELFQ-----TKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVF 123 (416)
T ss_dssp HHHHHHTT-----CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCC
T ss_pred HHHHHHhC-----CCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCC
Confidence 66666665 5556665 88999999999999999999999999999987 7778899999999999874 3468
Q ss_pred CHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 98 DPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 98 d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|+++|+++++ +++++|++++|+||||.+.| +++|.++|+++ |+++|+|++++.. .....+.. .+.++
T Consensus 124 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~~----~~~~~~~~----~~~d~ 191 (416)
T 3isl_A 124 DPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRTE-DALFIVDAVATIG----GCEVKVDE----WKIDA 191 (416)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHHT-TCEEEEECTTTTT----TSCCCTTT----TTCSE
T ss_pred CHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHHc-CCEEEEECCcccc----CCCcchhh----cCCCE
Confidence 9999999998 58999999999999999999 89999999999 9999999998742 11112211 34569
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHhhh--------------------------------------hccccCCCh
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ--------------------------------------SQFTSGASS 218 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~ 218 (352)
++.|++|+++ ++.++|++++++++++.+.... .....+++.
T Consensus 192 ~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (416)
T 3isl_A 192 AIGGTQKCLS-VPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEAT 270 (416)
T ss_dssp EECCSSSTTC-CCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCH
T ss_pred EEecCccccC-CCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCH
Confidence 9999999864 4456899999999988876321 112345677
Q ss_pred HHHHHHHHHhcccCCChHH-HHHHHHHHHHHHHHHHHHhcccCCceecCCCC---ceEEEeecCCccCCcccCCCCCCCh
Q 018665 219 ISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAEGFGKIENS 294 (352)
Q Consensus 219 ~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
..+.++.++++. ..++ ++++.++++++++++.+.|++. |+.+..+.. +.++++.+++.. +.
T Consensus 271 ~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 335 (416)
T 3isl_A 271 TMLYALREGVRL---VLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI-----------DG 335 (416)
T ss_dssp HHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC-----------CH
T ss_pred HHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC-----------CH
Confidence 777777777764 2334 7888999999999999999986 888876643 566778887432 78
Q ss_pred HHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHH-HHHHHHHHHHHHhhhCC
Q 018665 295 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTT-LQAAVERIKKGLLTLRP 348 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~-l~~~~~~l~~~~~~~~~ 348 (352)
.++.+.|.+++||.+.+|.....++++|++++. ++++ +++++++|+++++++..
T Consensus 336 ~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 392 (416)
T 3isl_A 336 ESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNA 392 (416)
T ss_dssp HHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCC
Confidence 899999987779999998765567899999944 4455 99999999999988754
No 98
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.6e-33 Score=260.00 Aligned_cols=295 Identities=15% Similarity=0.145 Sum_probs=235.0
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
...+++ +.++++++ . ++.+++++|++++..++.++.++||.|+++.|+|.++...++..|.+++.++
T Consensus 110 ~~~~l~------~~la~~~g-----~--~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~ 176 (427)
T 2w8t_A 110 DHMEVE------QALRDFYG-----T--TGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFR 176 (427)
T ss_dssp HHHHHH------HHHHHHHT-----C--SEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEEC
T ss_pred HHHHHH------HHHHHHhC-----C--CceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeC
Confidence 345677 88888885 2 3667777778899999999999999999999999999999999999998887
Q ss_pred ccCCCCcccCHHHHHhhccC----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccc
Q 018665 89 TRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 164 (352)
Q Consensus 89 ~~~~~~~~~d~~~l~~~l~~----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~ 164 (352)
. .|++.|++.+++ ++++|++++++||+|.+.| +++|.++|+++ |+++|+||+|+.+.+.... .+
T Consensus 177 ~-------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~---l~~l~~l~~~~-g~~li~Dea~~~~~~~~~g-~~ 244 (427)
T 2w8t_A 177 H-------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP---LKEMVAVAKKH-GAMVLVDEAHSMGFFGPNG-RG 244 (427)
T ss_dssp T-------TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC---HHHHHHHHHHT-TCEEEEECTTTTTTSSTTS-CC
T ss_pred C-------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCC-Cc
Confidence 3 489999998865 7899999999999999999 99999999999 9999999999987654221 22
Q ss_pred ccc-CCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh--hccccCCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 165 FAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ--SQFTSGASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 165 ~~~-~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
+.. .....+.++++.|+||.+|++| ||+++++++++.+.... ..++.++++..+.++.++++. ....+++
T Consensus 245 ~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~----~~~~~~~ 317 (427)
T 2w8t_A 245 VYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRK----LMTAHEK 317 (427)
T ss_dssp HHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHH----HTSCHHH
T ss_pred hHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHH----HhcCHHH
Confidence 222 2212345799999999998555 99999998888776542 223456777777777778775 2224677
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCCC-CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC---
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--- 317 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~--- 317 (352)
+++++++++++.+.|+++ |+.+..+. .+.++++.+++.. +..++.+.|.++ ||.+.++..++.
T Consensus 318 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~-Gi~v~~~~~~~~~~~ 384 (427)
T 2w8t_A 318 RERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLEDQE-----------QAAMMWQALLDG-GLYVNMARPPATPAG 384 (427)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESSHH-----------HHHHHHHHHHHT-TEECEEECTTTSCTT
T ss_pred HHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECCHH-----------HHHHHHHHHHHC-CeEEeeeCCCCCCCC
Confidence 888999999999999988 88877333 5567888887531 577899999987 999999876653
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+++|++++. +++++++++++|+++++++..
T Consensus 385 ~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 385 TFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 3589999997 999999999999999988765
No 99
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=9.9e-35 Score=263.06 Aligned_cols=292 Identities=12% Similarity=0.114 Sum_probs=230.4
Q ss_pred cCCCCCChhhhccchhhHH-HHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQ-FVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~-ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|++..+..+++ +. ++++++ .+ +|++++|+++++..++.+++++||+|+++.|+|.++...++..|.
T Consensus 49 ~~~~~~~~~l~------~~~la~~~~-----~~--~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~ 115 (371)
T 2e7j_A 49 EIKTPPIHDFI------HNQLPKFLG-----CD--VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGL 115 (371)
T ss_dssp ----CCHHHHH------HTHHHHHTT-----SS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTC
T ss_pred hhHHHHHHHHH------HHHHHHHcC-----CC--EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCC
Confidence 34667778888 99 999986 33 999999999999999999999999999999999999999999999
Q ss_pred eEEEec--ccCCCCcccCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 83 TPVILP--TRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 83 ~v~~i~--~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
+++.++ .+ .++.+|+++|+++++ ++++++++++|+||||.++| +++|.++|+++ |+++|+|++|+.+
T Consensus 116 ~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~-~~~li~D~a~~~~ 189 (371)
T 2e7j_A 116 NIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKIAKVCSEY-DVPLLVNGAYAIG 189 (371)
T ss_dssp EEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHHHHHHHHTT-TCCEEEECTTTBT
T ss_pred eEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCC---HHHHHHHHHHc-CCeEEEECccccC
Confidence 999999 54 446789999999997 68999999999999999999 89999999999 9999999999874
Q ss_pred ccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHH-HHhhhh--cc-----ccCCChHHHHHHHHH
Q 018665 156 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA-CNKIQS--QF-----TSGASSISQKAGVAA 227 (352)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~-~~~~~~--~~-----~~~~~~~~~~~~~~~ 227 (352)
.. +.++... +.++++.|+||.++ ++.|+|++++++++++. +..... .. ..+++...+.++.++
T Consensus 190 ~~----~~~~~~~----~~di~~~s~sK~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 260 (371)
T 2e7j_A 190 RM----PVSLKEI----GADFIVGSGHKSMA-ASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMAS 260 (371)
T ss_dssp TB----CCCHHHH----TCSEEEEEHHHHSS-CCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHH
T ss_pred CC----CCChhhc----CCCEEEecCCcCCC-CCCCcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHH
Confidence 32 1222222 34499999999997 45599999999988776 654332 11 345666666666666
Q ss_pred hcccCCChHHHHHHHHHH--HHHHHHHHHHhcccCCceecCCC--CceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 228 LGLGYAGGEVVSKMVKAF--RERRDFLVKSFGELEGVKMSEPQ--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
++. ... +..+++ +++++++.+.|+++ ++.+..+. .+.++|++++ +..++.+.|.+
T Consensus 261 l~~----~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~ 319 (371)
T 2e7j_A 261 FPH----VRE--RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--------------VLYEISKKAKG 319 (371)
T ss_dssp HHH----HHH--HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--------------HHHHHHHHSSS
T ss_pred HHH----HHH--HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--------------CHHHHHHHHHH
Confidence 653 111 566677 88889999999888 88887653 3556888875 35678888874
Q ss_pred ccCEEeccCCCCCC------CCeEE-EEee---cCHHHHHHHHHHHHHHHhhh
Q 018665 304 KAQVALVPGDAFGD------DTCIR-ISYA---ASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 304 ~~gi~i~~g~~~~~------~~~iR-i~~~---~~~~~l~~~~~~l~~~~~~~ 346 (352)
+||.+.| ..+.. ++++| ++++ .+++++++++++|+++++++
T Consensus 320 -~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 320 -GRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp -GGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -CCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 5999887 33222 68999 9999 58999999999999998765
No 100
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=3.5e-33 Score=254.68 Aligned_cols=295 Identities=16% Similarity=0.152 Sum_probs=234.3
Q ss_pred HHHHHHHHhcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCccc
Q 018665 21 QQFVINLKENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
+.++++++ ... ++|++++|+++++..++.++.++||+|+++.+.|++ +...++..|.+++.++++.+ +.+
T Consensus 63 ~~la~~~~-----~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~ 135 (393)
T 3kgw_A 63 QGIQYVFQ-----TRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPG--EHY 135 (393)
T ss_dssp HHHHHHHT-----CCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCC
T ss_pred HHHHHHhC-----CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC--CCC
Confidence 77777765 333 369999999999999999999999999999888753 36788899999999998743 458
Q ss_pred CHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 98 DPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 98 d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|+++|++++++ ++++|++++|+||||.++| +++|.++|+++ |+++|+||+++.. ....... ..+.++
T Consensus 136 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~De~~~~g----~~~~~~~----~~~~d~ 203 (393)
T 3kgw_A 136 TLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRY-QCLLLVDSVASLG----GVPIYMD----QQGIDI 203 (393)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT-TCEEEEECTTTTT----TSCCCTT----TTTCCE
T ss_pred CHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHc-CCEEEEECCcccc----Ccccchh----hcCCCE
Confidence 99999999987 8999999999999999999 88999999999 9999999998742 1111111 134568
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHhhhh-----------------------ccccCCChHHHHHHHHHhcccCC
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-----------------------QFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
++.|+||.++ ++.++|++++++++++.+..... ....+++...+.++.++++..
T Consensus 204 ~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-- 280 (393)
T 3kgw_A 204 MYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALI-- 280 (393)
T ss_dssp EEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH--
T ss_pred EEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHH--
Confidence 8999999885 44569999999999988865321 123456777777777777641
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
....++++.++++++++++.+.|+++ ++++..+. .+.++++.+++.. +..++.+.|.+++||.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gi~v 348 (393)
T 3kgw_A 281 AEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAGY-----------NWRDIVSYVLDHFSIEI 348 (393)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTTB-----------CHHHHHHHHHHHHCEEC
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeCCCCC-----------CHHHHHHHHHHhCCEEE
Confidence 12347888999999999999999988 88776433 3566778877542 78899999988779999
Q ss_pred ccCCCCCCCCeEEEEe-ec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 310 VPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 310 ~~g~~~~~~~~iRi~~-~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
.+|..+..++++|+++ +. +++++++++++|++++++++..
T Consensus 349 ~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 349 SGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp BCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred eCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 9988776788999998 64 8899999999999999887653
No 101
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=5.3e-33 Score=254.33 Aligned_cols=279 Identities=16% Similarity=0.191 Sum_probs=212.8
Q ss_pred hhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCeEEEe
Q 018665 12 QMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVIL 87 (352)
Q Consensus 12 ~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~v~~i 87 (352)
+++ +.++++++ .+++++++|+++++..++.+++++||+|+++.|.|.++.. .++..|.+++.+
T Consensus 66 ~l~------~~ia~~~g-------~~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 132 (404)
T 1e5e_A 66 NLE------GKIAFLEK-------TEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI 132 (404)
T ss_dssp HHH------HHHHHHHT-------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred HHH------HHHHHHhC-------CCcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE
Confidence 677 99999985 2478888888999999999999999999999999999888 788899999999
Q ss_pred cccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh-CCCEEEEecccccccccCCCCccccc
Q 018665 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 88 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
+.+ |++++++++++++++|++++|+||||.+++ +++|+++|++ + |+++|+||+|+.+.+. .++
T Consensus 133 ~~~-------d~~~l~~~i~~~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~-~~~li~De~~~~~~~~----~~~- 196 (404)
T 1e5e_A 133 NTA-------IPGEVKKHMKPNTKIVYFETPANPTLKIID---MERVCKDAHSQE-GVLVIADNTFCSPMIT----NPV- 196 (404)
T ss_dssp CTT-------STTHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTST-TCEEEEECTTTCTTTC----CGG-
T ss_pred CCC-------CHHHHHHhcCCCCcEEEEECCCCCCCcccC---HHHHHHHHHhhc-CCEEEEECCCchhhhC----Ccc-
Confidence 864 788999999889999999999999999999 9999999999 9 9999999999976542 122
Q ss_pred cCCCCCCceEEEecccccccccccee-EEEEcChhHHH-HHHhhhhcc-ccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
..++++++.|+||.++++|.|+ ||+++++++++ .+......+ +.+.+++.+.++.++++. ....+ +
T Consensus 197 ----~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~---~~~~~----~ 265 (404)
T 1e5e_A 197 ----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLST---LNIRM----K 265 (404)
T ss_dssp ----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT---HHHHH----H
T ss_pred ----ccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH---HHHHH----H
Confidence 1357799999999998899997 99999999888 787765555 556888888888888874 12222 2
Q ss_pred HHHHHHHHHHHHhccc--------------CCceecCCC----CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHcc
Q 018665 244 AFRERRDFLVKSFGEL--------------EGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 305 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~--------------~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (352)
+..++.+.+.+.+++. |++++..++ ++++.| ++++ ....+. .++++.
T Consensus 266 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~-------------~~~~~~-~~l~~~ 330 (404)
T 1e5e_A 266 AESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKS-------------GFEGAK-KLLDNL 330 (404)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETT-------------HHHHHH-HHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCC-------------CHHHHH-HHHHhC
Confidence 3333444444444332 344444333 666555 7653 223344 455566
Q ss_pred CEEeccCCCCCC---------------------------CCeEEEEeecCHHHHHHHHHHHHHHHhhhCC
Q 018665 306 QVALVPGDAFGD---------------------------DTCIRISYAASLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 306 gi~i~~g~~~~~---------------------------~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~~ 348 (352)
|| +.+|..++. ++++|||++. |+++++++.|+++++.+.+
T Consensus 331 ~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 331 KL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQGLDALLR 397 (404)
T ss_dssp SS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHHC
T ss_pred CC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHHH
Confidence 88 445543331 5799999999 7888899988888876543
No 102
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=3.6e-33 Score=253.71 Aligned_cols=290 Identities=13% Similarity=0.126 Sum_probs=225.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEecCCCCCChHHHHH---hcCCeEEEecccCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC----SPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISE 93 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~~~~vl~~~~~~~~~~~~~~---~~g~~v~~i~~~~~~ 93 (352)
+.++++++ .++++|++++|+++++..++.++. ++||+|+++.|+|+++...++ ..|.+++.++++.
T Consensus 50 ~~la~~~g-----~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-- 122 (382)
T 4eb5_A 50 EKVAKLVN-----GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK-- 122 (382)
T ss_dssp HHHHHHHT-----CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--
T ss_pred HHHHHHhC-----CCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--
Confidence 88888886 556899999999999999999987 889999999999998876665 4799999999863
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
++.+|+++|++++++++++|++++|+||||.++| +++|.++|+++ |++ |+|++|+. +..+..+.. .+
T Consensus 123 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~-i~D~a~~~----g~~~~~~~~----~~ 189 (382)
T 4eb5_A 123 YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEVLAGK-AAL-HIDATASV----GQIEVDVEK----IG 189 (382)
T ss_dssp TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHTTS-SEE-EEECTTTB----TTBCCCHHH----HT
T ss_pred CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HHHHHHHHHHC-CCE-EEEcchhc----CCcccCccc----cC
Confidence 4568999999999888999999999999999999 89999999999 999 99999983 221222221 23
Q ss_pred ceEEEeccccccccccceeEEEEcChhH-HHHHHh----hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNK----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 248 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 248 (352)
.++++.|+||.+|.+| +|+++++++. +..... .......+++...+.++.++++. ..+++++++++++++
T Consensus 190 ~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~ 264 (382)
T 4eb5_A 190 ADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEI---TAMEWREEAERLRRL 264 (382)
T ss_dssp CSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHH
Confidence 4589999999877445 7888887663 211100 01122345666677776677764 234578888999999
Q ss_pred HHHHHHHhcccCCceecCCCC---ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC--------
Q 018665 249 RDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------- 317 (352)
Q Consensus 249 ~~~l~~~l~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-------- 317 (352)
++++.+.|+++|++++..+.. +.++++.+++. +..++.+.|.++ ||.+.+|..|..
T Consensus 265 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~~~ 331 (382)
T 4eb5_A 265 RDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI------------EGESIVLSLDMA-GIQASTGSACSSKTLQPSHV 331 (382)
T ss_dssp HHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTS------------CHHHHHHHHHHH-TCBCBCCCGGGTSSCCCCHH
T ss_pred HHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCc------------CHHHHHHHHHHC-CEEEeccccccCCCCcccHH
Confidence 999999999988888776542 44567777642 778899998865 999999875432
Q ss_pred -----------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 318 -----------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 -----------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++++||+++. +++++++++++|++++++++.
T Consensus 332 ~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 332 LMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4799999995 899999999999999887653
No 103
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=8.2e-34 Score=261.61 Aligned_cols=289 Identities=17% Similarity=0.174 Sum_probs=227.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCEEEecCCCCCChHHHH---HhcCCeEEEecccCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS----PGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISE 93 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~~~~vl~~~~~~~~~~~~~---~~~g~~v~~i~~~~~~ 93 (352)
+.++++++ .++++|++++|+++|+..++.++.+ +||+|+++.++|.++...+ +..|.+++.++++.
T Consensus 75 ~~la~~~~-----~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-- 147 (423)
T 3lvm_A 75 NQIADLVG-----ADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR-- 147 (423)
T ss_dssp HHHHHHHT-----CCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--
T ss_pred HHHHHHcC-----CCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--
Confidence 88888886 5678999999999999999998873 7999999999999988777 55599999999874
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
++.+|+++|+++++++++++++++|+||||.++| +++|+++|+++ |+++|+||+++.. ........ .+
T Consensus 148 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~~----~~~~~~~~----~~ 215 (423)
T 3lvm_A 148 NGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD---IAAIGEMCRAR-GIIYHVDATQSVG----KLPIDLSQ----LK 215 (423)
T ss_dssp TSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHH-TCEEEEECTTTTT----TSCCCTTT----SC
T ss_pred CCccCHHHHHHhcCCCcEEEEEeCCCCCCccccC---HHHHHHHHHHc-CCEEEEEhhhhcC----CCCcChhh----cC
Confidence 5568999999999999999999999999999999 89999999999 9999999998752 11112211 34
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhhh-------hccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
.++++.|+||.+|.+| +|+++++++.++.+.... .....+++...+.++.++++. ....++++.++++
T Consensus 216 ~di~~~s~sK~~g~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~ 290 (423)
T 3lvm_A 216 VDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI---AKEEMATEMERLR 290 (423)
T ss_dssp CSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred CCEEEechHHhcCCCC--eEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 5699999999876444 899999887665554332 123345677777777777764 2345788899999
Q ss_pred HHHHHHHHHhcccCCceecCCCC---ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC------
Q 018665 247 ERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------ 317 (352)
Q Consensus 247 ~~~~~l~~~l~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~------ 317 (352)
++++++.+.|++++++.+..+.. +.++++.++.. +..++.+.|.+ |.+.+|..|..
T Consensus 291 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~l~~---i~v~~g~~~~~~~~~~~ 355 (423)
T 3lvm_A 291 GLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYV------------EGESLIMALKD---LAVSSGSACTSASLEPS 355 (423)
T ss_dssp HHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTS------------CHHHHHHHTTT---EECBCCCC-----CCCC
T ss_pred HHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCC------------CHHHHHHHHhh---heeccCccccCCCcccc
Confidence 99999999999988988876553 33455555432 67888887764 88888876544
Q ss_pred -------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 318 -------------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 -------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++++||+++. ++++++++++.|++++++++.
T Consensus 356 ~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 356 YVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp HHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 3789999986 889999999999999988765
No 104
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=5.1e-33 Score=253.07 Aligned_cols=291 Identities=12% Similarity=0.081 Sum_probs=228.5
Q ss_pred CCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeE
Q 018665 5 RVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 84 (352)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v 84 (352)
+...+..++| +.++++++ + + +.+++++|++++..++.++.++||.|+++.|+|..+...++..|.++
T Consensus 81 g~~~~~~~l~------~~la~~~g-----~-~-~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~ 147 (384)
T 1bs0_A 81 GYSVVHQALE------EELAEWLG-----Y-S-RALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQL 147 (384)
T ss_dssp CCCHHHHHHH------HHHHHHHT-----C-S-EEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEE
T ss_pred CChHHHHHHH------HHHHHHhC-----C-C-cEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCE
Confidence 3445667788 99999986 3 2 45555666899999999999999999999999999999999999999
Q ss_pred EEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 85 VILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 85 ~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+.+|. .|++.|++.+++ +++++++++|+||||.++| +++|.++|+++ |+++|+||+|+.+.+....
T Consensus 148 ~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~~~~ 216 (384)
T 1bs0_A 148 RRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP---LAEIQQVTQQH-NGWLMVDDAHGTGVIGEQG 216 (384)
T ss_dssp EEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHT-TCEEEEECTTTTTTSSGGG
T ss_pred EEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccC---HHHHHHHHHHc-CcEEEEECCcccceecCCC
Confidence 99874 378899988864 3778888999999999999 89999999999 9999999999865432111
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh--ccccCCChHHHHHHHHHhcccCCChH--H
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGE--V 237 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 237 (352)
......... +.+++++|+||.+|++| ||+++++++++.+..... .++.+++++.+.++.++++. .. +
T Consensus 217 ~~~~~~~~~--~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~----~~~~~ 287 (384)
T 1bs0_A 217 RGSCWLQKV--KPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAV----IRSDE 287 (384)
T ss_dssp CCHHHHTTC--CCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH----HHSHH
T ss_pred CchHHhcCC--CCcEEEeeccchhhccC---cEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHH----Hhccc
Confidence 111111111 23499999999998555 999999999888876432 22336888888888888875 23 6
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
.++.+++++++++++.+.|+++ ++++.. ..+.++|+.++... +..++.+.|.++ ||.+.++..++.
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~-----------~~~~l~~~l~~~-gi~v~~~~~~~~ 353 (384)
T 1bs0_A 288 GDARREKLAALITRFRAGVQDL-PFTLAD-SCSAIQPLIVGDNS-----------RALQLAEKLRQQ-GCWVTAIRPPTV 353 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS-SCEECS-CCSSBCCEEEESHH-----------HHHHHHHHHHHT-TEECCEECTTSS
T ss_pred cHHHHHHHHHHHHHHHHHHHhc-CCcccC-CCCCEEEEEeCCHH-----------HHHHHHHHHHHC-CcEEEeecCCCC
Confidence 6788899999999999999988 777764 45566777776431 577899999876 999999886643
Q ss_pred ---CCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 318 ---DTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 318 ---~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
.+++||+++. +++++++++++|+++
T Consensus 354 ~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 354 PAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 3689999986 899999999999875
No 105
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1.2e-33 Score=254.07 Aligned_cols=295 Identities=15% Similarity=0.136 Sum_probs=229.5
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCCh--HHHHHhcCCeEEEe
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVIL 87 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~--~~~~~~~g~~v~~i 87 (352)
..++| +.++++++ .+.+++++++|+|+++++..++.++.+ |+|+++++.|+++ ...++..|.+++.+
T Consensus 35 ~~~l~------~~la~~~g---~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v 103 (353)
T 2yrr_A 35 NRAIQ------ERLAALFD---PGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQRVAEMAALHGLDPEVL 103 (353)
T ss_dssp HHHHH------HHHHHHHC---CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHH------HHHHHHhC---CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchHHHHHHHHHcCCceEEE
Confidence 45566 88888875 222367899999999999999998876 8899999998874 45668899999999
Q ss_pred cccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 88 PTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 88 ~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
+++. ++.+|+++|++.+++ ++++|++++|+||||.++| +++|.++|+++ |+++|+|++|+.. ..+.++.
T Consensus 104 ~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~-~~~li~D~a~~~~----~~~~~~~ 173 (353)
T 2yrr_A 104 DFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEA-GALFFLDAVTTLG----MLPFSMR 173 (353)
T ss_dssp ECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHH-TCEEEEECTTTTT----TSCCCHH
T ss_pred eCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHc-CCeEEEEcCcccc----ccccccc
Confidence 9864 456899999999987 8999999999999999999 88999999999 9999999999632 2222222
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHh--------------h-hhccccCCChHHHHHHHHHhccc
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK--------------I-QSQFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~~~~~l~~~ 231 (352)
.. +.++++.|++|+++ ++.++|++++++++++.+.. . ......+++...+.++.++++..
T Consensus 174 ~~----~~d~~~~s~~K~~~-~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 248 (353)
T 2yrr_A 174 AM----GVDYAFTGSQKCLS-APPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLV 248 (353)
T ss_dssp HH----TCSEEECCTTSTTC-CCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHH
T ss_pred cc----CceEEEecCccccc-CCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 21 33588999999764 33347999999998876541 0 12333467777777777777641
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC--CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 232 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
....+++.+++++++++++.+.|+++ |+++..+. .+++++++++... +..++.+.|.++ ||.+
T Consensus 249 --~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~-gi~v 313 (353)
T 2yrr_A 249 --LEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEGV-----------DADRLVRALYAE-GVAV 313 (353)
T ss_dssp --HHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTTC-----------CHHHHHHHHHHT-TEEC
T ss_pred --HHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCCC-----------CHHHHHHHHHHC-CEEE
Confidence 12237788899999999999999987 88877654 5666778886432 688999999877 9999
Q ss_pred ccCCCCCCCCeEEEEeec--CHHHHH-HHHHHHHHHHhh
Q 018665 310 VPGDAFGDDTCIRISYAA--SLTTLQ-AAVERIKKGLLT 345 (352)
Q Consensus 310 ~~g~~~~~~~~iRi~~~~--~~~~l~-~~~~~l~~~~~~ 345 (352)
.+|..+..++++|++++. ++++++ +++++|+++++.
T Consensus 314 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 314 AGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp EECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred eCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 999877678899999953 778888 999999998864
No 106
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=1.9e-33 Score=257.46 Aligned_cols=301 Identities=15% Similarity=0.132 Sum_probs=227.4
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHhcC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
|+...+..++| +.+|++++ .+++|++++|++ ++..++..+. .+||.|+++.|+|.++...++..|
T Consensus 87 ~~~~~~~~~l~------~~la~~~~------~~~~i~~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g 153 (401)
T 2bwn_A 87 SGTTAYHRRLE------AEIAGLHQ------KEAALVFSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNA 153 (401)
T ss_dssp BCCBHHHHHHH------HHHHHHTT------CSEEEEESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSC
T ss_pred cCChHHHHHHH------HHHHHHhC------CCcEEEECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcC
Confidence 44455677888 99999986 357788866655 7777766653 588999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
.+++.++.+ |++.+++.++ +++++|++++|+||||.++| +++|.++|+++ |+++|+||+|+...+
T Consensus 154 ~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~ 222 (401)
T 2bwn_A 154 GPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP---IKEICDIAEEF-GALTYIDEVHAVGMY 222 (401)
T ss_dssp CCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC---HHHHHHHHHHH-TCEEEEECTTTTTTS
T ss_pred CeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC---HHHHHHHHHHc-CCEEEEecccccccc
Confidence 999999863 6778887775 57899999999999999999 89999999999 999999999995433
Q ss_pred CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh--ccccCCChHHHHHHHHHhcccCCCh
Q 018665 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
.......+.........+++++|+||.+|++| ||+++++++++.+..... .++.+.+++.+.++.++++.. ..
T Consensus 223 ~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~ 297 (401)
T 2bwn_A 223 GPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFL--KT 297 (401)
T ss_dssp STTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHH--TS
T ss_pred CCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHH--Hh
Confidence 22211111111111124689999999998766 999999988888765332 223345567777777777641 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
..+++++++++++++++.+.|+++ |+++..+.++ ++++.+++.. +..++.+.|.+++||.+.|+..+
T Consensus 298 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~L~~~~gi~v~~~~~~ 364 (401)
T 2bwn_A 298 AEGQKLRDAQQMHAKVLKMRLKAL-GMPIIDHGSH-IVPVVIGDPV-----------HTKAVSDMLLSDYGVYVQPINFP 364 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSS-CEEEECCCHH-----------HHHHHHHHHHHHHCEECCEECTT
T ss_pred cccHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCC-eEEEEeCChH-----------HHHHHHHHHHhcCCEEEeecCCC
Confidence 335788889999999999999988 8888766665 5788876421 56789989874459999998766
Q ss_pred CCC---CeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 316 GDD---TCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 316 ~~~---~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+.+ +++|++++. +++++++++++|+++++++
T Consensus 365 ~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 365 TVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp TSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred CCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 533 589999995 8999999999999988654
No 107
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=3e-33 Score=252.68 Aligned_cols=298 Identities=15% Similarity=0.165 Sum_probs=232.9
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC-CCCCC-hHHHHHhcCCeEE
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVS-YPEMARIADATPV 85 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~-~~~~~-~~~~~~~~g~~v~ 85 (352)
.+..++| +.++++++ .+.+++++++++|+++++..++.++.++||+|++++ +.|.. +...++..|.+++
T Consensus 37 ~~~~~l~------~~la~~~g---~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~ 107 (366)
T 1m32_A 37 GVVEQIR------QQLTALAT---ASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHH 107 (366)
T ss_dssp TTHHHHH------HHHHHHHC---SSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHH------HHHHHHhC---CCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceE
Confidence 5667788 99999985 111235899999999999999999998999988776 55544 5677888999999
Q ss_pred EecccCCCCcccCHHHHHhhccC--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 86 ILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
.++++. ++.+|+++|++++++ +++++++++++||||.++| +++|.++|+++ |+++|+||+|+... .+.
T Consensus 108 ~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~~~----~~~ 177 (366)
T 1m32_A 108 AYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAHRY-GKTYIVDAMSSFGG----IPM 177 (366)
T ss_dssp EEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHH-TCEEEEECTTTTTT----SCC
T ss_pred EEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---HHHHHHHHHHc-CCEEEEECCccccC----cCc
Confidence 999863 456899999999975 5788999999999999999 89999999999 99999999997532 111
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh------------------hccccCCChHHHHHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------------------SQFTSGASSISQKAGV 225 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~ 225 (352)
.+. ..+.++++.|+||+++ ++.++|++++++++++.+.... ....++++...+.++.
T Consensus 178 ~~~----~~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 252 (366)
T 1m32_A 178 DIA----ALHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFA 252 (366)
T ss_dssp CTT----TTTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHH
T ss_pred ccc----ccCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHH
Confidence 221 1245699999999874 3446799999998876654321 0112467788887788
Q ss_pred HHhcccCCChHH--HHHHHHHHHHHHHHHHHHhcccCCceecCC---CCceEEEeecCC--ccCCcccCCCCCCChHHHH
Q 018665 226 AALGLGYAGGEV--VSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFST--YYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 226 ~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~---~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 298 (352)
++++. ..+. +++.+++++++++++.+.|+++ ++.+..+ ..++++++.+++ .. +..++.
T Consensus 253 ~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 317 (366)
T 1m32_A 253 QALKE---LAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQY-----------RFSEFY 317 (366)
T ss_dssp HHHHH---HHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTTC-----------CHHHHH
T ss_pred HHHHH---HHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCCC-----------CHHHHH
Confidence 88765 1233 6778889999999999999987 8777654 357678888874 21 678899
Q ss_pred HHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 299 RYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+.|.++ ||.+.+|..+ .++++|++++. +++++++++++|+++++++
T Consensus 318 ~~l~~~-gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 318 RRLKEQ-GFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp HHHHHT-TEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHC-CEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999876 9999998766 57899999996 7899999999999988754
No 108
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=6.8e-33 Score=251.66 Aligned_cols=288 Identities=13% Similarity=0.137 Sum_probs=222.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCEEEecCCCCCChHHHHHh---cCCeEEEecccCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC----SPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRISE 93 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~~~~vl~~~~~~~~~~~~~~~---~g~~v~~i~~~~~~ 93 (352)
+.++++++ .++++|++++|+++++..++.++. ++||+|+++.+.|+++...++. .|.+++.++++ .
T Consensus 50 ~~la~~~~-----~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~ 122 (382)
T 4hvk_A 50 EKVAKLVN-----GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--K 122 (382)
T ss_dssp HHHHHHTT-----CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--T
T ss_pred HHHHHHcC-----CCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--C
Confidence 77777765 567889999999999999999987 8999999999999988865544 69999999987 3
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
++.+|+++|+++++++++++++++|+||||.+.| +++|.++|+++ |+ +|+|++++.. .....+.. .+
T Consensus 123 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~-~~-li~D~a~~~~----~~~~~~~~----~~ 189 (382)
T 4hvk_A 123 YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEEISEVLAGK-AA-LHIDATASVG----QIEVDVEK----IG 189 (382)
T ss_dssp TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHSSS-SE-EEEECTTTBT----TBCCCHHH----HT
T ss_pred CCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---HHHHHHHHHHc-CE-EEEEhHHhcC----CCCCCchh----cC
Confidence 4568999999999999999999999999999999 88999999999 99 9999998742 11122211 23
Q ss_pred ceEEEeccccccccccceeEEEEcChhHHHHHHhh-------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
.++++.|+||.+|.+| +|+++++++. .+... ......+++...+.++.+++.. ..+++++..++++
T Consensus 190 ~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~ 262 (382)
T 4hvk_A 190 ADMLTISSNDIYGPKG--VGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEI---TAMEWREEAERLR 262 (382)
T ss_dssp CSEEEEESGGGTSCTT--CEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred CCEEEEeHHHhcCCCc--eEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHH
Confidence 4599999999877445 6777765543 11111 1122345677777777777764 2467888999999
Q ss_pred HHHHHHHHHhcccCCceecCCCC---ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC------
Q 018665 247 ERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------ 317 (352)
Q Consensus 247 ~~~~~l~~~l~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~------ 317 (352)
++++++.+.|++++++.+..+.. +.++++.+++. +..++.+.|.++ ||.+.+|..|..
T Consensus 263 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~ 329 (382)
T 4hvk_A 263 RLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI------------EGESIVLSLDMA-GIQASTGSACSSKTLQPS 329 (382)
T ss_dssp HHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC------------CHHHHHHHHHHT-TCBCBCC--------CCC
T ss_pred HHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC------------CHHHHHHHHHHC-CEEEeeCCccCCCCCcch
Confidence 99999999999988988876543 33456666543 788899988865 999999876643
Q ss_pred -------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 318 -------------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 -------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++++|++++. ++++++++++.|++++++++.
T Consensus 330 ~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 330 HVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4789999996 889999999999999987754
No 109
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-32 Score=252.44 Aligned_cols=293 Identities=13% Similarity=0.060 Sum_probs=227.2
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChHHHHHh----cC
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMARI----AD 81 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~~~~~~----~g 81 (352)
...+++ +.++++++ .++++|++++|+++++..++.++ .++||+|+++.|+|.++...+.. .|
T Consensus 70 ~~~~l~------~~la~~~g-----~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g 138 (406)
T 3cai_A 70 VLDAAR------EAVADLVN-----ADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYG 138 (406)
T ss_dssp HHHHHH------HHHHHHHT-----CCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHB
T ss_pred HHHHHH------HHHHHHhC-----CCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcC
Confidence 345566 99999986 56689999999999999999887 78899999999999987765554 79
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
.+++.++++. .++.+|+++|++++++++++|++++|+||||.++| +++|.++|+++ |+++|+|++|+. +..
T Consensus 139 ~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~----g~~ 209 (406)
T 3cai_A 139 AKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVNSASGTLGGVTD---LRAMTKLVHDV-GALVVVDHSAAA----PYR 209 (406)
T ss_dssp CEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCC---CHHHHHHHHHT-TCEEEEECTTTT----TTC
T ss_pred CeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCC---HHHHHHHHHHc-CCEEEEEccccc----CCC
Confidence 9999999873 34568999999999989999999999999999999 89999999999 999999999974 222
Q ss_pred ccccccCCCCCCceEEEeccccccccccceeE-EEEcChhHHHHHHhhhh---------ccccCCChHHHHHHHHHhccc
Q 018665 162 HTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVAACNKIQS---------QFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g-~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~ 231 (352)
...+.. .+.++++.|+||.+| ++ +| ++++++++++.+..... ....+++...+.++.++++..
T Consensus 210 ~~~~~~----~~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~ 282 (406)
T 3cai_A 210 LLDIRE----TDADVVTVNAHAWGG-PP--IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYL 282 (406)
T ss_dssp CCCHHH----HCCSEEEEEGGGGTS-CS--CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHH
T ss_pred CCCchh----cCCCEEEeehhhhcC-CC--cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHH
Confidence 122222 235689999999876 54 88 99999988877654321 113456776666666666531
Q ss_pred CC-C-----------hHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHH
Q 018665 232 YA-G-----------GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 232 ~~-~-----------~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
.. . ..+++++.++++++++++.+.|++++++.+..+. .+ ++++.+++. +..+
T Consensus 283 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~------------~~~~ 349 (406)
T 3cai_A 283 AALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKV------------PADR 349 (406)
T ss_dssp HTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETTB------------CHHH
T ss_pred HHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECCc------------CHHH
Confidence 10 0 0157888889999999999999998888877653 44 577777643 6888
Q ss_pred HHHHHHHccCEEeccCC------CCCC---CCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 297 LCRYLLDKAQVALVPGD------AFGD---DTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~------~~~~---~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
+.+.|.++ ||.+.+|. .++. .+++|++++. ++++++++++.|+++
T Consensus 350 ~~~~L~~~-gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 350 VVQRLADN-GILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHHHHHHT-TEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHC-CcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 99998765 99999886 2222 4799999998 889999999998753
No 110
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.4e-32 Score=249.30 Aligned_cols=290 Identities=14% Similarity=0.128 Sum_probs=220.6
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCC-------------CCEEEecCCCCCChHHHHHhcCCeEEE
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSP-------------GDEVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~-------------~~~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
+.+++++. ..+ .++++|++++|+++++..++.++..+ +|+|+++.|+|.++...++..|.+++.
T Consensus 72 ~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~ 149 (397)
T 3f9t_A 72 EKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIY 149 (397)
T ss_dssp HHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEE
Confidence 44444444 333 56789999999999999999998765 899999999999999999999999999
Q ss_pred ecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc-cc
Q 018665 87 LPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TS 164 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~-~~ 164 (352)
++++. ++.+|+++|++++++ +++++++++|+||||.+.| +++|.++|+++ |+++|+||+|+++....... .+
T Consensus 150 v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 150 APIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEELSKIAKEN-NIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp ECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHHHHHHHHHH-TCEEEEECTTGGGTGGGCCGGGC
T ss_pred EeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHHHHHHHHHh-CCeEEEEccccchhhhhcccccc
Confidence 99874 466899999999988 8999999999999999999 99999999999 99999999998754321110 00
Q ss_pred cc----cCC-CCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhhhhccc--------c---CCChHHHHHHHHH
Q 018665 165 FA----SLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQFT--------S---GASSISQKAGVAA 227 (352)
Q Consensus 165 ~~----~~~-~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~ 227 (352)
+. ... .. +.++++.|++|.++ +|.++|+++++++ +.+.+........ . +.+...+.++...
T Consensus 224 ~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 301 (397)
T 3f9t_A 224 KKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRY 301 (397)
T ss_dssp CTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHH
T ss_pred cccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHH
Confidence 00 000 11 34588999999886 7779999987654 4443322111111 1 1234455555554
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
+. ...+++..++++++++++.+.|+++ ++.+..+..+.++++.++ +..++.+.|.++ ||
T Consensus 302 ~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~-gi 360 (397)
T 3f9t_A 302 LG-----REGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDE--------------DYKEVCKKLRDR-GI 360 (397)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECT--------------THHHHHHHHHHT-TC
T ss_pred Hh-----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeC--------------CHHHHHHHHHhC-Ce
Confidence 43 5667888888999999999999998 888665566666777764 467888998876 99
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
.+.++.. ++++|++++. +++++++++++|+++++
T Consensus 361 ~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 361 YVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp BCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 9988753 6899999995 89999999999999875
No 111
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=7e-32 Score=244.82 Aligned_cols=292 Identities=12% Similarity=0.036 Sum_probs=218.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcCCeEEEecccCCCCcccC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
+.+++++ |.+.+.+.+++++|++++++.++.+++++||+|+++.|.|++.. ..+...|.+++.++.+ .++.+|
T Consensus 59 ~~la~~~---g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d 133 (376)
T 3f0h_A 59 KFMLEYA---KAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLT 133 (376)
T ss_dssp HHHHHHH---TCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCC
T ss_pred HHHHHHh---CCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCC
Confidence 5555555 43322244566899999999999999999999999998777644 4577889999999986 446689
Q ss_pred HHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEE
Q 018665 99 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 178 (352)
Q Consensus 99 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 178 (352)
+++|++.++++++++++++|+||||.++| +++|.++|+++ |+++|+|++++.+.. ...+.. .+.++++
T Consensus 134 ~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~~~~~~~~----~~~~~~----~~~d~~~ 201 (376)
T 3f0h_A 134 KEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIGEFCKKN-NMFFVCDCVSAFLAD----PFNMNE----CGADVMI 201 (376)
T ss_dssp HHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHHHHHHHT-TCEEEEECTTTTTTS----CCCHHH----HTCSEEE
T ss_pred HHHHHHhhccCceEEEEecccCCcceecC---HHHHHHHHHHc-CCEEEEEcCccccCc----cccccc----cCccEEE
Confidence 99999999889999999999999999999 99999999999 999999999876422 111111 2345899
Q ss_pred eccccccccccceeEEEEcChhHHHHHHhhhh-----------------ccccCCChHHHHHHHHHhcccCCChH-HHHH
Q 018665 179 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-----------------QFTSGASSISQKAGVAALGLGYAGGE-VVSK 240 (352)
Q Consensus 179 ~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~ 240 (352)
.|++|.++ ++.++|++++++++++.+..... .+..+++...+.++.++++.. ... .+++
T Consensus 202 ~s~~K~l~-~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~ 278 (376)
T 3f0h_A 202 TGSQKVLA-CPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEI--KKHGGADA 278 (376)
T ss_dssp EETTTTTC-CCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH--HHTTHHHH
T ss_pred ecCccccc-CCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHH--HHhcCHHH
Confidence 99999997 34457889999999888764211 112344554445555555431 122 5788
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCCc-eEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQGA-FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
+.++++++++++.+.|+++ ++.+..+... .++.+..++. +..++.+.|.+++||.+.+|.....++
T Consensus 279 ~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~l~~~~gi~v~~g~~~~~~~ 345 (376)
T 3f0h_A 279 EVARIASQAADFRAKIKDL-PFELVSESPANGVTSVHPTTA------------NAYDIFLKLKDEYGIWICPNGGEMKDT 345 (376)
T ss_dssp HHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEEEEEESSS------------CHHHHHHHHHHHSSEECEECCGGGTTT
T ss_pred HHHHHHHHHHHHHHHHHHc-CCccCccccCceEEEEeCCCC------------CHHHHHHHHHHhCCEEEecCccccCCC
Confidence 8899999999999999987 6766654332 2222332221 788999999987799999985444578
Q ss_pred eEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 320 CIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 320 ~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
++|++++. +++++++++++|++++++
T Consensus 346 ~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 346 IFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp CEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999975 899999999999999875
No 112
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=4.5e-32 Score=248.94 Aligned_cols=294 Identities=17% Similarity=0.117 Sum_probs=227.0
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEE
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVI 86 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~ 86 (352)
+....+++ +.++++++ .+..++++++++++..++.++.++||.|+++.|+|.++...++..|.+++.
T Consensus 103 ~~~~~~l~------~~la~~~g-------~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~ 169 (409)
T 3kki_A 103 DYDKPMIE------KRLAKFTG-------FDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHP 169 (409)
T ss_dssp TTTSCHHH------HHHHHHHT-------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHH------HHHHHHhC-------CCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEE
Confidence 34455666 88888875 234566677789999999999999999999999999999999999999988
Q ss_pred ecccCCCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 87 LPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
++. .|+++|++++++ +++++++++|+||||.+.| +++|.++|+++ |+++|+||+|+++.+........
T Consensus 170 ~~~-------~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~---l~~l~~la~~~-~~~li~De~~~~g~~g~~g~~~~ 238 (409)
T 3kki_A 170 FMH-------NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAP---LAELVNISKEF-GCALLVDESHSLGTHGPNGAGLL 238 (409)
T ss_dssp ECT-------TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCC---HHHHHHHHHHH-TCEEEEECTTTTTTSSGGGCCHH
T ss_pred ecC-------CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCcch
Confidence 864 489999999975 5899999999999999999 99999999999 99999999998743321111111
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh--ccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
.......+.++++.|+||.+|.+ .|++++++++++.+..... .++.+.++..+.++.++++. .+..+++++
T Consensus 239 ~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~----~~~~~~~~~ 311 (409)
T 3kki_A 239 AELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEI----IESADNRRQ 311 (409)
T ss_dssp HHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHH----HHHCHHHHH
T ss_pred hhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHH----HhcCHHHHH
Confidence 11111124458999999999844 4999999988887765432 23344677777777777765 233367788
Q ss_pred HHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---CCCe
Q 018665 244 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTC 320 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~~~~ 320 (352)
+++++++++.+.|+++ ++.+. ..+.++|+.++... +..++.+.|.++ ||.+.+...+. ..++
T Consensus 312 ~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~~-----------~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~~ 376 (409)
T 3kki_A 312 HLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGDER-----------NTEKVRDYLESN-GVFGSVFCRPATSKNKNI 376 (409)
T ss_dssp HHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEESHH-----------HHHHHHHHHHHT-TEECEEECTTSSCTTCEE
T ss_pred HHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCCHH-----------HHHHHHHHHHHC-CceEeeeCCCCcCCCCcE
Confidence 8999999999999988 77765 46667888876531 467899999987 99998755432 2469
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 321 IRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 321 iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+|++++. +++++++++++|+++++..
T Consensus 377 iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 377 IRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 9999985 8999999999999999764
No 113
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=1.6e-32 Score=253.26 Aligned_cols=313 Identities=11% Similarity=0.084 Sum_probs=223.8
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHH---HhcCCCCEEEecCCCCCChH-HHHHh
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVL---AVCSPGDEVIIPAPFWVSYP-EMARI 79 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~---~l~~~~~~vl~~~~~~~~~~-~~~~~ 79 (352)
|+++.+..+++ +.+++++. + . .+++|++++|+++++..++. .+.+++ +|++++|+|+++. ..+..
T Consensus 80 ~~~~~~~~~l~------~~la~~~~--~-~-~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~ 148 (426)
T 1sff_A 80 VLAYEPYLELC------EIMNQKVP--G-D-FAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLAL 148 (426)
T ss_dssp TEECHHHHHHH------HHHHHHSS--C-S-SCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHH
T ss_pred ccCCHHHHHHH------HHHHHhCC--c-c-cccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhh
Confidence 55667778888 99999873 1 1 24899999999999999988 666765 8999999998765 45665
Q ss_pred cCCe-------------EEEecccCC---CCcccCHHHHHhhcc-----CCeeEEEEc-CCCCCcc-cCCCHHHHHHHHH
Q 018665 80 ADAT-------------PVILPTRIS---ENFLLDPKVLESKLT-----EKSRLLILC-SPSNPTG-SVYPKNLLDEIAR 136 (352)
Q Consensus 80 ~g~~-------------v~~i~~~~~---~~~~~d~~~l~~~l~-----~~~~~i~i~-~p~nptG-~~~~~~~l~~l~~ 136 (352)
.|.+ ++.++++.. .++.+|++.|+++++ +++++|+++ +++| || ..+|.+++++|.+
T Consensus 149 ~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~ 227 (426)
T 1sff_A 149 TGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRA 227 (426)
T ss_dssp SSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHH
T ss_pred cCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHH
Confidence 5543 667776531 134468999999886 466777664 4467 99 7889999999999
Q ss_pred HHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCC
Q 018665 137 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 216 (352)
Q Consensus 137 ~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~ 216 (352)
+|+++ |+++|+||+|+++.+.+.. .++... +..+.+.|+||.+| +|+|+||+++++++++.+.......++++
T Consensus 228 l~~~~-~~~li~De~~~~~~~~g~~-~~~~~~----~~~~di~s~sK~~~-~GlriG~~~~~~~~~~~l~~~~~~~~~~~ 300 (426)
T 1sff_A 228 LCDEH-GIMLIADEVQSGAGRTGTL-FAMEQM----GVAPDLTTFAKSIA-GGFPLAGVTGRAEVMDAVAPGGLGGTYAG 300 (426)
T ss_dssp HHHHH-TCEEEEECTTTTTTTTSSS-SGGGGT----TSCCSEEEECGGGG-TSSCCEEEEEEHHHHTTSCTTSBCCSSSS
T ss_pred HHHHc-CCEEEEechhhccCcccch-hhhhhc----CCCCCEEEEccccc-CCCceEEEEEcHHHHhhhccCCcCcCCCC
Confidence 99999 9999999999987665531 111111 11223559999999 49999999999998877754334456678
Q ss_pred ChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcc----cCCceecCCCCceEEEeecCCccCCcccCCCCCC
Q 018665 217 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 292 (352)
Q Consensus 217 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
|++.+.++.++++.. .+ .+..++++++++.+.+.|++ ++.+....+. |+++|+++++....... ...
T Consensus 301 ~~~~~~a~~aal~~~---~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~---~~~ 371 (426)
T 1sff_A 301 NPIACVAALEVLKVF---EQ--ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHNKP---DAK 371 (426)
T ss_dssp CHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGCTTSB---CHH
T ss_pred CHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCC---ChH
Confidence 999999998887641 11 23445566666666666654 3333334444 67788888531100000 001
Q ss_pred ChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 293 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+..++.+.|.++ ||.+.||..+ ++++|++++. +++++++++++|++++++++
T Consensus 372 ~~~~l~~~l~~~-gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 372 LTAEIVARARDK-GLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFDEAK 425 (426)
T ss_dssp HHHHHHHHHHHT-TEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHC-CcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 467788888875 9999998753 6899999873 99999999999999998764
No 114
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-31 Score=244.98 Aligned_cols=278 Identities=18% Similarity=0.180 Sum_probs=215.3
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCC----------CCEEEecCCCCCChHHHHHhcCC--------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSP----------GDEVIIPAPFWVSYPEMARIADA-------- 82 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~----------~~~vl~~~~~~~~~~~~~~~~g~-------- 82 (352)
+.+++++ ..+++++++|+++++..++..+..+ +++|+++.++|+++...+...+.
T Consensus 85 ~~la~~~-------g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (392)
T 3ruy_A 85 EKVAKLT-------NKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGF 157 (392)
T ss_dssp HHHHHHH-------TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTC
T ss_pred HHHHHhc-------CCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhcccc
Confidence 6666665 3789999999999999999876543 67999999999887766554422
Q ss_pred -----eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHH-HHHHHHHHHhCCCEEEEecccccccc
Q 018665 83 -----TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL-LDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 83 -----~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~-l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
++..++. .|+++|++++++++++|++++|+||||.++|.++ +++|.++|+++ |+++|+||+|+++.
T Consensus 158 ~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~~ 229 (392)
T 3ruy_A 158 GPMLPGIIVIPY-------GDLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKE-NVLFVADEIQTGLG 229 (392)
T ss_dssp CSCCSSEEEECT-------TCHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTT-TCEEEEECTTTTTT
T ss_pred CCCCCCCeeeCc-------ccHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeechhCCC
Confidence 2333332 2899999999989999999999999999996555 99999999999 99999999998876
Q ss_pred cCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCCh
Q 018665 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
+.+... ....... ..+ +.++||.++ +| +|+|++++++++++.+.......+++++++.+.++.++++. .
T Consensus 230 ~~g~~~-~~~~~~~-~~d---~~~~SK~l~-gG~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~ 299 (392)
T 3ruy_A 230 RTGKVF-ACDWDNV-TPD---MYILGKALG-GGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEV----L 299 (392)
T ss_dssp TTSSSS-GGGGGTC-CCS---EEEECGGGG-TTTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHH----H
T ss_pred ccccch-hhhccCC-CCC---EEEEchhhh-CChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHH----H
Confidence 655422 1111111 122 347789986 56 89999999999988877666666778999999999999985 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccc--CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 236 EVVSKMVKAFRERRDFLVKSFGEL--EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~--~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
+. ++..++++++++++.+.|+++ +.+....+.+++ +++.+++ +..++.+.|.++ ||.+.|++
T Consensus 300 ~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~-~~~~~~~-------------~~~~l~~~l~~~-gi~v~~~~ 363 (392)
T 3ruy_A 300 EE-EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLF-IGIELNE-------------PARPYCEQLKAA-GLLCKETH 363 (392)
T ss_dssp HH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTE-EEEEESS-------------CSHHHHHHHHTT-TEECCCBT
T ss_pred Hh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeE-EEEEEcc-------------hHHHHHHHHHHC-CcEEecCC
Confidence 22 677888999999999999987 335555555554 5555654 567888888854 99999874
Q ss_pred CCCCCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 314 AFGDDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 314 ~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
++++|++++. +++++++++++|++++
T Consensus 364 ----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 364 ----ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 7899999765 8999999999999886
No 115
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=1.9e-31 Score=240.23 Aligned_cols=305 Identities=14% Similarity=0.073 Sum_probs=224.8
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH--HHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE--MARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~--~~~~ 79 (352)
.|.+..+..+++ +.+++++. ..| .++++|++++|+++++..++.++.++||+|+++.|+|.++.. .++.
T Consensus 40 ~~~~~~g~~~~~------~~~~~~l~~~~g--~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~ 111 (359)
T 1svv_A 40 TQHAGYGQDSHC------AKAARLIGELLE--RPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHETGAIEA 111 (359)
T ss_dssp CCCCSTTCSHHH------HHHHHHHHHHHT--CTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSSTTHHHH
T ss_pred hccccccccHHH------HHHHHHHHHHhC--CCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHHHHHhc
Confidence 466667777777 77777777 455 567899999999999999999999999999999999998887 5888
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccCC-------eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTEK-------SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~-------~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.|.+++.++.+ ++.+|+++|++.++++ +++|++++| ||||.++|.+++++|+++|+++ |+++|+||+|
T Consensus 112 ~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~-~~~li~De~~ 186 (359)
T 1svv_A 112 TGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEH-GLYLFLDGAR 186 (359)
T ss_dssp TTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHH-TCEEEEECTT
T ss_pred CCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHh-CCEEEEEccc
Confidence 99999999974 4668999999999765 889999998 7999999999999999999999 9999999999
Q ss_pred cccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh--hccccCCChHHHHHHHHHhcc
Q 018665 153 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ--SQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 230 (352)
.++..... ......+.......+++.|.+|..+ ..+.|+++.++++++.+.... ..+..+.+......+.++++
T Consensus 187 ~~~~~~~~-~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 262 (359)
T 1svv_A 187 LASALSSP-VNDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMK- 262 (359)
T ss_dssp HHHHHTST-TCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTS-
T ss_pred hhhhhcCC-CcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHh-
Confidence 65432111 1111100000122378889999743 356899999998877766532 11111222223333344444
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 310 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~ 310 (352)
....++.+++++++++++.+.| +.+++.+..+.+++++|++++ .++.+.|.+++||.+.
T Consensus 263 ----~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~l~~~~gi~v~ 321 (359)
T 1svv_A 263 ----DNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE----------------NTMIAELNNDFDMYTV 321 (359)
T ss_dssp ----TTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE----------------HHHHHHHTTTEECEEE
T ss_pred ----hhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC----------------HHHHHHHHHhcCEEEE
Confidence 2445778888999999999999 567888887788888887643 4788888876688883
Q ss_pred cCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 311 PGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 311 ~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+ .....++++|++++. +++++++++++|+++++++
T Consensus 322 ~-~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 322 E-PLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp E-EETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred e-cccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 2 111235689999875 8999999999999988654
No 116
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=1.1e-31 Score=243.57 Aligned_cols=285 Identities=13% Similarity=0.124 Sum_probs=215.8
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHH---hc---CCC-CEEEecCCCCCChHHHHH
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLA---VC---SPG-DEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~---l~---~~~-~~vl~~~~~~~~~~~~~~ 78 (352)
+..+..+++ +.++++++ + ++++++++|+++++..++.+ +. ++| |+|++++|+|+.+...+.
T Consensus 68 ~~~~~~~l~------~~la~~~g-----~-~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~ 135 (375)
T 2eh6_A 68 ENPWQEELA------HKLVKHFW-----T-EGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSL 135 (375)
T ss_dssp CCHHHHHHH------HHHHHTSS-----S-CEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHH
T ss_pred CCHHHHHHH------HHHHhhcC-----C-CCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhh
Confidence 345566777 88888864 3 48999999999999998875 34 677 999999999998876655
Q ss_pred hcCCe-------------EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCE
Q 018665 79 IADAT-------------PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 79 ~~g~~-------------v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~ 144 (352)
..+.. +..++. .|+++|++++++++++|++++++||||.+ .+.+++++|.++|+++ |+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~-~~ 207 (375)
T 2eh6_A 136 SATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEK-DV 207 (375)
T ss_dssp HHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHH-TC
T ss_pred hhcCCccccCCCCCCCCCceeCCC-------chHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHh-CC
Confidence 43321 222221 48999999998899999999999999999 5688899999999999 99
Q ss_pred EEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHH
Q 018665 145 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAG 224 (352)
Q Consensus 145 ~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
++|+||+|+++...+.. .++..... ..+ + .|+||.++ +|+|+|++++++++++.+.......+++++++.+.++
T Consensus 208 ~li~De~~~~~~~~~~~-~~~~~~~~-~~d-~--~s~SK~~~-~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (375)
T 2eh6_A 208 LLIIDEVQTGIGRTGEF-YAYQHFNL-KPD-V--IALAKGLG-GGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAG 281 (375)
T ss_dssp EEEEECTTTTTTTTSSS-SGGGGGTC-CCS-E--EEECGGGG-TTSCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHH
T ss_pred EEEEeccccCCCCCCcc-hhhhhcCC-CCC-E--EEEccccc-CCCCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHH
Confidence 99999999976544321 12222221 122 2 27889999 7999999999998877765533334566788888888
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
.++++. .+ +..++++++++++.+.|++++. ... +..|.++|+++++ +..++.+.|.++
T Consensus 282 ~~~l~~----~~---~~~~~~~~~~~~l~~~L~~~~~-~~~-~~~g~~~~~~~~~-------------~~~~~~~~l~~~ 339 (375)
T 2eh6_A 282 TVVVDE----VE---KLLPHVREVGNYFKEKLKELGK-GKV-KGRGLMLGLELER-------------ECKDYVLKALEK 339 (375)
T ss_dssp HHHHHH----HH---HHHHHHHHHHHHHHHHHHHTTS-SEE-EEETTEEEEECSS-------------CCHHHHHHHHHT
T ss_pred HHHHHH----HH---HHHHHHHHHHHHHHHHHHHHhc-CCc-eEEEEEEEEEEcC-------------cHHHHHHHHHHC
Confidence 887764 22 6677888889999999988733 333 3456778888864 467888888864
Q ss_pred cCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 305 AQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 305 ~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
||.+.++ .++++|++++. +++++++++++|++++
T Consensus 340 -gi~~~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 340 -GLLINCT----AGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp -TEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred -CCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 9999886 37899999874 8999999999998763
No 117
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=8.5e-31 Score=235.79 Aligned_cols=287 Identities=10% Similarity=0.076 Sum_probs=210.9
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH--HHhc--CCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM--ARIA--DATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~--~~~~--g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .+++|++++|+++++..++.++.++||+|+++.|+|.++... +... |.+++.++.+ ++.
T Consensus 50 ~~la~~~g------~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~ 120 (356)
T 1v72_A 50 RKFCEIFE------RDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAK 120 (356)
T ss_dssp HHHHHHHT------SCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGC
T ss_pred HHHHHHhC------CCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCe
Confidence 66666664 245699999999999999999999999999999998776655 6776 9999999874 356
Q ss_pred cCHHHHHh-hccC-------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc--CCCCccccc
Q 018665 97 LDPKVLES-KLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY--APATHTSFA 166 (352)
Q Consensus 97 ~d~~~l~~-~l~~-------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~--~~~~~~~~~ 166 (352)
+|+++|++ ++++ ++++|++++|+| ||.++|.+++++|+++|+++ |+++|+|++|..+.. .+..... .
T Consensus 121 ~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~-~ 197 (356)
T 1v72_A 121 LDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSS-SLGLHMDGSRFANALVSLGCSPAE-M 197 (356)
T ss_dssp CCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHT-TCEEEEEETTHHHHHHHHTCCTTT-T
T ss_pred EcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHc-CCeEEEEchhhHhHhccCCCCHHH-h
Confidence 89999999 8875 688999999886 99999999999999999999 999999999975421 1211111 1
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhcccc-CC-ChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS-GA-SSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
.+. ....+++.|+||. | ...+.|++++++++++.+.......+. .. +...+..+...++ .+...+..++
T Consensus 198 ~~~--~~~d~~~~s~sK~-g-~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~ 268 (356)
T 1v72_A 198 TWK--AGVDALSFGATKN-G-VLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLT-----DDLWLRNARK 268 (356)
T ss_dssp TGG--GTCCEEEECCGGG-T-CSSCEEEEESSGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTS-----TTHHHHHHHH
T ss_pred hhh--hcCCEEEEecccC-C-CcCccEEEEECHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHH-----hhhHHHHHHH
Confidence 110 1122556799998 5 333445888899998887654332221 11 2222222333443 2334456677
Q ss_pred HHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEE
Q 018665 245 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 324 (352)
Q Consensus 245 ~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~ 324 (352)
++++++++.+.|++++|+++..+..++++|++++ .++.+.|.++ ||.+.+|. ++ ++++|++
T Consensus 269 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~----------------~~~~~~l~~~-gi~v~~g~-~~-~~~iRi~ 329 (356)
T 1v72_A 269 ANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD----------------SAMIDALLKA-GFGFYHDR-WG-PNVVRFV 329 (356)
T ss_dssp HHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC----------------HHHHHHHHHT-TCBCBCSS-SS-TTEEEEE
T ss_pred HHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC----------------HHHHHHHHhc-CeEEeccc-cC-CCeEEEE
Confidence 8888999999999888998877778888888753 2678888765 99999877 54 7899999
Q ss_pred eec--CHHHHHHHHHHHHHHHhhhC
Q 018665 325 YAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 325 ~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
++. +++++++++++|++++++.+
T Consensus 330 ~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 330 TSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp CCTTCCHHHHHHHHHHHHHTC----
T ss_pred ecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 875 88999999999999887653
No 118
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=2.3e-31 Score=238.79 Aligned_cols=296 Identities=18% Similarity=0.231 Sum_probs=216.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~ 79 (352)
.|+++++..++| +.+|++++ .+++++++|+++++..++.++.++||+|+++.|+|.... ..++.
T Consensus 33 ~y~~~~~~~~l~------~~la~~~g-------~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~ 99 (347)
T 1jg8_A 33 VYGEDPTINELE------RLAAETFG-------KEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVL 99 (347)
T ss_dssp GGTCCHHHHHHH------HHHHHHHT-------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHH
T ss_pred ccCCChHHHHHH------HHHHHHhC-------CceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccccchhhc
Confidence 577788888999 99999985 357888899999999999999999999999999986533 36778
Q ss_pred cCCeEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 80 ADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 80 ~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.|.+++.+ .+ .++.+|+++|++++++ ++++|++++|+||| |.++|.+++++|+++|+++ |+++|+|+++
T Consensus 100 ~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~-~~~li~D~a~ 175 (347)
T 1jg8_A 100 SGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEH-GINVHIDGAR 175 (347)
T ss_dssp TCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHH-TCEEEEEETT
T ss_pred cCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHC-CCEEEeehhh
Confidence 89999888 43 3455899999999975 68999999999999 9999999999999999999 9999999987
Q ss_pred ccc--ccCCCCccccccCCCCCCceEEEeccccccccccceeE-EEEcChhHHHHHHhhhhccccC--CChHHHHHHHHH
Q 018665 153 EHI--IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVAACNKIQSQFTSG--ASSISQKAGVAA 227 (352)
Q Consensus 153 ~~~--~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g-~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 227 (352)
... .+.+. +...+....+ .++.|+||.++. + +| +++.++++++.+......++.+ .+...+.++..+
T Consensus 176 ~~~~~~~~~~---~~~~~~~~~d--~~~~s~sK~l~~-~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (347)
T 1jg8_A 176 IFNASIASGV---PVKEYAGYAD--SVMFCLSKGLCA-P--VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIA 247 (347)
T ss_dssp HHHHHHHHCC---CHHHHHHTCS--EEEEESSSTTCC-S--SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHH
T ss_pred hhcchhhcCC---ChHHhccccc--EEEEecccccCC-C--ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Confidence 531 11121 1111111122 445689999973 2 46 5667888888876654433322 344455555555
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec-CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccC
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 306 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 306 (352)
++.. .+.+++ ..++++.+.+.|+++ ++.+. .+..+.++|++++... .+..++.+.|.++ |
T Consensus 248 l~~~---~~~~~~----~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~-g 308 (347)
T 1jg8_A 248 LTKM---VDRLKE----DHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNLK----------VNAHGFIEALRNS-G 308 (347)
T ss_dssp HHHS---STTHHH----HHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTSS----------SCHHHHHHHHHHH-T
T ss_pred HHHH---HHHHHH----HHHHHHHHHHHHHhc-CceeccCCCcceEEEEEccccc----------CCHHHHHHHHHHC-C
Confidence 5531 122222 234567778888777 76652 3445666888887410 1688999999865 9
Q ss_pred EEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 307 VALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 307 i~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
|.+.+++ ++++|++++. +++++++++++|+++++++
T Consensus 309 i~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 309 VLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp EECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9998753 5789999975 8999999999999998764
No 119
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=4e-32 Score=248.45 Aligned_cols=285 Identities=15% Similarity=0.112 Sum_probs=204.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCC-EEEecCCCCCChHHHHHh---cCCeEEEecccCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC----SPGD-EVIIPAPFWVSYPEMARI---ADATPVILPTRIS 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~----~~~~-~vl~~~~~~~~~~~~~~~---~g~~v~~i~~~~~ 92 (352)
+.++++++ .++++|++++|+++++..++.++. ++|| +|+++.+.|+++...+.. .|.+++.++++.
T Consensus 70 ~~la~~~~-----~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~- 143 (400)
T 3vax_A 70 EYLASTVS-----AEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP- 143 (400)
T ss_dssp HHHHHHTT-----CCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT-
T ss_pred HHHHHHcC-----CCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC-
Confidence 66777665 567899999999999999999987 8899 999999999988765554 699999999874
Q ss_pred CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCC
Q 018665 93 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 172 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
++.+|+++|+++++++++++++++|+||||.+.| +++|.++|+++ |+++|+|++|+.. .....+...
T Consensus 144 -~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~-~~~li~D~a~~~~----~~~~~~~~~---- 210 (400)
T 3vax_A 144 -SGRISVEGVMERLRPDTLLVSLMHVNNETGVIQP---VAELAQQLRAT-PTYLHVDAAQGYG----KVPGDLTTP---- 210 (400)
T ss_dssp -TCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHTTS-SCEEEEECTTTTT----TSGGGGGSC----
T ss_pred -CCCcCHHHHHHhcCCCceEEEEECCCCCceeeCc---HHHHHHHHHhc-CCEEEEEhhhhcC----CCCcChhhc----
Confidence 5568999999999999999999999999999999 89999999999 9999999999742 222222221
Q ss_pred CceEEEeccccccccccceeEEEE-cChh-HH---HHHHhh-------hhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 173 ERTLTVNGFSKAFAMTGWRLGYIA-GPKH-FV---AACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 173 ~~~i~~~s~sK~~g~~g~~~g~l~-~~~~-~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
.++++.|++|.+|.. ++|+++ ++++ +. ..+... ......+++...+.++.++++. ..+++++
T Consensus 211 -~d~~~~s~~K~~g~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~ 284 (400)
T 3vax_A 211 -IDMISISGHKIGAPK--GVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI---FEAEHAQ 284 (400)
T ss_dssp -CSEEEEETGGGTSCS--SCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHSHHH
T ss_pred -CcEEEEeHHHhCCCC--ceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH---HHhhHHH
Confidence 448999999976644 467777 6651 11 111111 1222445677777777777764 2445788
Q ss_pred HHHHHHHHHHHHHHHhcccCCceecCCCC---ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
.+++++++++++.+.|+ .+++.+..+.. +.++++.+++. +..++.+.|. + ||.+.+|..|..
T Consensus 285 ~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~-~-gi~v~~g~~~~~ 349 (400)
T 3vax_A 285 WQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDV------------DAEAFLVTLK-D-LVAVATGSASTS 349 (400)
T ss_dssp HHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTC------------CHHHHHHHHH-H-HHHHTTTTEEEE
T ss_pred HHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCC------------CHHHHHHHHh-c-CcEEEecccccC
Confidence 89999999999999999 77988876654 34566676643 7888999888 5 899999865432
Q ss_pred -------------------CCeEEEEe-ec--CHHHHHHHHHHHHHHHhh
Q 018665 318 -------------------DTCIRISY-AA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 318 -------------------~~~iRi~~-~~--~~~~l~~~~~~l~~~~~~ 345 (352)
++++||++ +. +++++++++++|++++++
T Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 350 ASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred CCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 48999999 75 789999999999998764
No 120
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.98 E-value=7.2e-32 Score=246.60 Aligned_cols=274 Identities=14% Similarity=0.153 Sum_probs=209.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC------C-CCEEEecCCCCCChH-HHHHhcCCe------------EEEecccCCCCc
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS------P-GDEVIIPAPFWVSYP-EMARIADAT------------PVILPTRISENF 95 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~------~-~~~vl~~~~~~~~~~-~~~~~~g~~------------v~~i~~~~~~~~ 95 (352)
.+++++++|+++++..++.++.. + +++|++++|+|++.. ..++..|.+ +..++.
T Consensus 97 ~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------ 170 (397)
T 2ord_A 97 GGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF------ 170 (397)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT------
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC------
Confidence 58999999999999999988753 3 478999999987654 477777765 666654
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.|+++|++++++++++|++++|+||||. +++.+++++|+++|+++ |+++|+||+|+++.+.+. ..++...... .+
T Consensus 171 -~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~-~~~~~~~~~~-~d 246 (397)
T 2ord_A 171 -NNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEY-DALLVFDEVQCGMGRTGK-LFAYQKYGVV-PD 246 (397)
T ss_dssp -TCHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSS-SSHHHHHTCC-CS
T ss_pred -CCHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCccCcc-chhhhhhCCC-CC
Confidence 2899999999889999999999999999 99999999999999999 999999999998766553 2222222211 22
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
+.|+||.++ +|+|+|+++++++++ .+.......+++++++.+.++.++++... + ++..++++++++++.+
T Consensus 247 ---~~s~sK~~~-~G~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---~--~~~~~~~~~~~~~l~~ 316 (397)
T 2ord_A 247 ---VLTTAKGLG-GGVPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELT---K--EGFLEEVEEKGNYLMK 316 (397)
T ss_dssp ---EEEECGGGG-TTSCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHT---S--TTHHHHHHHHHHHHHH
T ss_pred ---eeeeccccC-CCcCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHH
Confidence 237899999 899999999988876 55433334556789999999998887521 1 3566777788888888
Q ss_pred HhcccC-Cceec--CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CH
Q 018665 255 SFGELE-GVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SL 329 (352)
Q Consensus 255 ~l~~~~-g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~ 329 (352)
.|++++ ++... .+..|.++++++++.. +..++.+.|.++ ||.+.+++ ++++|++++. ++
T Consensus 317 ~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~-gi~v~~~~----~~~iRis~~~~~~~ 380 (397)
T 2ord_A 317 KLQEMKEEYDVVADVRGMGLMIGIQFREEV-----------SNREVATKCFEN-KLLVVPAG----NNTIRFLPPLTVEY 380 (397)
T ss_dssp HHHHHHHHCTTEEEEEEETTEEEEEECTTS-----------CHHHHHHHHHHT-TEECEEET----TTEEEECCCTTCCH
T ss_pred HHHHHHHhCCceEEEEEEeEEEEEEECChH-----------HHHHHHHHHHHC-CCEEccCC----CCEEEEECCcCCCH
Confidence 887641 22211 1234566778886531 578899998875 99999873 6899999764 89
Q ss_pred HHHHHHHHHHHHHHhh
Q 018665 330 TTLQAAVERIKKGLLT 345 (352)
Q Consensus 330 ~~l~~~~~~l~~~~~~ 345 (352)
+++++++++|++++++
T Consensus 381 e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 381 GEIDLAVETLKKVLQG 396 (397)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998864
No 121
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.98 E-value=7.2e-31 Score=236.72 Aligned_cols=286 Identities=13% Similarity=0.093 Sum_probs=218.5
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC-ChHHHHHhcCCeEEEecccCCCCcccC
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~-~~~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
+.+.+.+. ..|.. ++++|++++|+++++..++.++.++ +.+++..+.|. .+...++..|.+++.++.+ .++.+|
T Consensus 46 ~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d 121 (362)
T 3ffr_A 46 KTASDNLKTLLELP-SNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFY 121 (362)
T ss_dssp HHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCC
T ss_pred HHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCC
Confidence 44444444 33332 4678999999999999999999877 44555555554 2345778889999999986 445689
Q ss_pred HHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEE
Q 018665 99 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 178 (352)
Q Consensus 99 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 178 (352)
+++|+ ++++++++++++|+||||.++| +++|.++|+++||+++|+|++++.... ...+. ..++++
T Consensus 122 ~~~l~--~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~----~~~~~------~~d~~~ 186 (362)
T 3ffr_A 122 PADIT--VPADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYP----KFDWT------KIDSVF 186 (362)
T ss_dssp GGGCC--CCTTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSS----CCCTT------SCSEEE
T ss_pred HHHHh--ccCCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCc----ccChh------HCcEEE
Confidence 99998 7789999999999999999999 889999999987899999999875321 11111 144889
Q ss_pred eccccccc-cccceeEEEEcChhHHHHHHhhhh---------------------ccccCCChHHHHHHHHHhcccCCChH
Q 018665 179 NGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQS---------------------QFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 179 ~s~sK~~g-~~g~~~g~l~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
.|+||+++ .+| +|++++++++++.+..... ....+++...+.++.++++.. ...
T Consensus 187 ~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~--~~~ 262 (362)
T 3ffr_A 187 FSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDM--LQI 262 (362)
T ss_dssp EETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH--HHH
T ss_pred EecccccCCCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHH--HHc
Confidence 99999997 445 6888899998887765432 114557777777777777531 122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCC----CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
.++++.++++++++++.+.|+++||+++..+ ..+.++++.+++ +..++.+.|.++ ||.+.+|
T Consensus 263 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~-gi~~~~g 328 (362)
T 3ffr_A 263 SADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-------------LPGEINKILEPF-DMAVGAG 328 (362)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-------------CHHHHHHHHGGG-TEEEEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-------------CHHHHHHHHHHC-CeEEecC
Confidence 3678888999999999999999889888752 245667777764 578899999877 9999998
Q ss_pred CCCCCCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 313 DAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
..+..++++|++++. ++++++++++.|++++
T Consensus 329 ~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 329 YGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp SGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 766678899999986 8899999999998864
No 122
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.98 E-value=1.9e-30 Score=237.24 Aligned_cols=285 Identities=13% Similarity=0.178 Sum_probs=208.9
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~ 82 (352)
.+...+++ +.++++++ . ++.++++++++++..++.++.++||+|+++.|+|.++...+ +..|.
T Consensus 63 ~~~~~~l~------~~la~~~g-----~--~~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~ 129 (398)
T 2rfv_A 63 NPTTDALE------KKLAVLER-----G--EAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGI 129 (398)
T ss_dssp CHHHHHHH------HHHHHHHT-----C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTC
T ss_pred ChHHHHHH------HHHHHHhC-----C--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCC
Confidence 34445666 88888875 2 36667777889999999999999999999999999988776 78899
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++.+ |++++++.+++++++|++++|+||||.++| +++|+++|+++ |+++|+||+|+.+.+.
T Consensus 130 ~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~---- 194 (398)
T 2rfv_A 130 NVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD---IETVAGIAHQQ-GALLVVDNTFMSPYCQ---- 194 (398)
T ss_dssp EEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC---HHHHHHHHHHT-TCEEEEECTTTCTTTC----
T ss_pred EEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCcccccC----
Confidence 99999863 899999999989999999999999999999 99999999999 9999999999865432
Q ss_pred cccccCCCCCCceEEEecccccccccccee-EEEEcChhHHH-HHHhhhhcc-ccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
.++ . .+.++++.|+||.++.+|.|+ |++++++++++ .+......+ +.+++++.+.++.++++. ...+++
T Consensus 195 ~~~-~----~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~ 266 (398)
T 2rfv_A 195 QPL-Q----LGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT---LGIRME 266 (398)
T ss_dssp CGG-G----GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT---HHHHHH
T ss_pred Cch-h----hCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh---HHHHHH
Confidence 111 1 246699999999998789998 99999999887 666555555 567888899988888875 233444
Q ss_pred HHHHHHHHHHHHHHHHhcc--------------cCCceecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHH
Q 018665 240 KMVKAFRERRDFLVKSFGE--------------LEGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 302 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~--------------~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (352)
+. .++.+.+.+.|++ +|++.+..+ ..+.++++++++.. .+...+.+.+.
T Consensus 267 ~~----~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~l~~~~~ 332 (398)
T 2rfv_A 267 RH----CENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL----------EAGRRMINSVE 332 (398)
T ss_dssp HH----HHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----------HHHHHHHTTCS
T ss_pred HH----HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCH----------HHHHHHHHhCC
Confidence 43 3344444444443 344444433 23445666776310 02333443333
Q ss_pred HccCEEeccCCCCC-----------------------CCCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 303 DKAQVALVPGDAFG-----------------------DDTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 303 ~~~gi~i~~g~~~~-----------------------~~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
. .|+.+.+|+.+. .++.+|+|++. ++++++++.+.|+++
T Consensus 333 ~-~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 333 L-CLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp S-SEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred c-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 2 378888875431 15799999998 667888887777653
No 123
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.98 E-value=1.5e-30 Score=236.74 Aligned_cols=291 Identities=13% Similarity=0.129 Sum_probs=220.2
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEec-CCCCCCh-HHHHHhcCCeEEEecc-cCCC
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC---SPGDEVIIP-APFWVSY-PEMARIADATPVILPT-RISE 93 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~~~~~vl~~-~~~~~~~-~~~~~~~g~~v~~i~~-~~~~ 93 (352)
+.++++++ ..+ +++++|++++|+++++..++.++. ++||+|+++ .+.|... ...++..|.+++.+++ + .
T Consensus 45 ~~l~~~~~~~~~--~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~ 120 (385)
T 2bkw_A 45 KNTRAVFKSAAA--SKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLK--I 120 (385)
T ss_dssp HHHHHHTTCCGG--GTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSS--T
T ss_pred HHHHHHhCCCCC--CCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCC--C
Confidence 78888876 222 346899999999999999999987 889999888 4556555 3677889999999998 5 3
Q ss_pred CcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-CEEEEecccccccccCCCCccccccCCCC
Q 018665 94 NFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-RLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~-~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
++.+|+++|++++++ ++++|++++|+||||.++| +++|.++|++++ |+++|+|++|+.. ..+..+. .
T Consensus 121 ~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~----~~~~~~~----~ 189 (385)
T 2bkw_A 121 GESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCSIG----CEEFEFD----E 189 (385)
T ss_dssp TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTTTT----TSCCCTT----T
T ss_pred CCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECccccC----Ccccccc----c
Confidence 456899999999976 7899999999999999999 889999999873 7999999999742 2112221 1
Q ss_pred CCceEEEeccccccccccceeEEEEcChhHHH-HHH----------------------hhhh---ccccCCChHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA-ACN----------------------KIQS---QFTSGASSISQKAGV 225 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~-~~~----------------------~~~~---~~~~~~~~~~~~~~~ 225 (352)
.+.++++.|+||.++ ++.++|++++++++++ .+. .... .+..+++...+.++.
T Consensus 190 ~~~d~~~~s~~K~~~-~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (385)
T 2bkw_A 190 WGVDFALTASQKAIG-APAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLD 268 (385)
T ss_dssp TTCSEEEEESSSTTC-CCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHH
T ss_pred cCceEEEecCccccc-cCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHH
Confidence 345689999999774 2234699999988776 431 1110 012357777777777
Q ss_pred HHhcccCCChH-HHHHHHHHHHHHHHHHHHHh-cccCCceecCC-----CCceEEEeecCCccCCcccCCCCCCChHHHH
Q 018665 226 AALGLGYAGGE-VVSKMVKAFRERRDFLVKSF-GELEGVKMSEP-----QGAFYLFIDFSTYYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 226 ~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l-~~~~g~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
++++. ..+ .+++.+++++++++++.+.| +++ ++.+..+ ..+.++++.++ +..++.
T Consensus 269 ~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~ 330 (385)
T 2bkw_A 269 VALKE---ILEEGLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVA--------------DPPDVI 330 (385)
T ss_dssp HHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECS--------------CHHHHH
T ss_pred HHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecC--------------CHHHHH
Confidence 77764 122 26778888999999999999 888 8887753 24667788775 356788
Q ss_pred HHHHHccCEEeccCCCCC-CCCeEEEE-ee-----cCHHHHHHHHHHHHHHHhhh
Q 018665 299 RYLLDKAQVALVPGDAFG-DDTCIRIS-YA-----ASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~~-~~~~iRi~-~~-----~~~~~l~~~~~~l~~~~~~~ 346 (352)
+.|.++ ||.+.+|..+. .++++|++ ++ .+++++++++++|+++++++
T Consensus 331 ~~l~~~-gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 331 AFLKSH-GVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp HHHHHT-TEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred HHHHHC-CeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHhc
Confidence 888764 99999986542 35799999 65 38899999999999998754
No 124
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.98 E-value=1.2e-30 Score=246.15 Aligned_cols=300 Identities=14% Similarity=0.114 Sum_probs=228.5
Q ss_pred HHHHHHHH-hcCCCCCCCcE--EEeCChHHHHHHHHHHhcCCC--------CEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 21 QQFVINLK-ENGLSYTPDQI--LVSNGAKQSILQAVLAVCSPG--------DEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i--~~~~g~~~a~~~~~~~l~~~~--------~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
+.+++++. ..|.+..++++ ++++|+++++..++.++.+++ |+|+++.++|.++...++..|.+++.+++
T Consensus 142 ~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~ 221 (514)
T 3mad_A 142 AEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPL 221 (514)
T ss_dssp HHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECB
T ss_pred HHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeee
Confidence 77777777 66665555788 999999999999999987655 89999999999999999999999999998
Q ss_pred cCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc-----CCCCccc
Q 018665 90 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY-----APATHTS 164 (352)
Q Consensus 90 ~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~-----~~~~~~~ 164 (352)
+. ++.+|+++|++++++++++|++++|+||+|.+.| +++|.++|+++ |+++|+|++|+++.+ .|.....
T Consensus 222 ~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~-~i~livDea~~~~~~~~~~~~g~~~~~ 295 (514)
T 3mad_A 222 DA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEH-GIGCHVDACLGGFILPWAERLGYPVPP 295 (514)
T ss_dssp CT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHH-TCEEEEECTTTTTTHHHHHHTTCCCCC
T ss_pred CC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHh-CCeEEEecccccccchhHHhcCCCCCc
Confidence 74 5679999999999999999999999999999999 89999999999 999999999987643 1211112
Q ss_pred cccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhh-----------ccccCCChHHHHHHHHHhcccCC
Q 018665 165 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-----------QFTSGASSISQKAGVAALGLGYA 233 (352)
Q Consensus 165 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~ 233 (352)
+.. ...+.++++.|++|.++ ++.++|+++++++.+........ ....+.+.....++.+++.. +
T Consensus 296 ~~~--~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~--l 370 (514)
T 3mad_A 296 FDF--RLEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLS--L 370 (514)
T ss_dssp CST--TSTTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHH--H
T ss_pred ccc--cCCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHH--H
Confidence 211 11345688999999975 77889999988766544221100 00112333333333343332 1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 234 GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
...+++++.++..++++++.+.|++++++.++.+..+ ++++..++. +..++.+.|.++ ||.+ ++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~------------~~~~l~~~L~~~-Gi~v-~g~ 435 (514)
T 3mad_A 371 GEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL------------NIYQVMEEMAGR-GWRL-NGL 435 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS------------CHHHHHHHHHTT-TCBC-EEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC------------CHHHHHHHHHhc-CCEe-ccC
Confidence 2566788899999999999999999889988866655 466665432 788999999876 8887 443
Q ss_pred CCCCCCeEEEEeec---CHHHHHHHHHHHHHHHhhhCC
Q 018665 314 AFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 314 ~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~~~ 348 (352)
. .++++|+++.. ++++++++++.|+++++++..
T Consensus 436 ~--~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 436 H--RPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp T--TTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3 36789999984 569999999999999987653
No 125
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.2e-30 Score=245.28 Aligned_cols=309 Identities=13% Similarity=0.087 Sum_probs=233.6
Q ss_pred CCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC-----CC---CEEEecCCCCCChHH
Q 018665 5 RVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS-----PG---DEVIIPAPFWVSYPE 75 (352)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-----~~---~~vl~~~~~~~~~~~ 75 (352)
...++..+++ +.+++++. ..|.+..++++++++|+++++..++.++.+ +| ++|+++.++|.++..
T Consensus 100 ~~~~~~~~l~------~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~ 173 (497)
T 3mc6_A 100 DVFPAVRKME------SEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDK 173 (497)
T ss_dssp TTCHHHHHHH------HHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHH
T ss_pred ccChHHHHHH------HHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHH
Confidence 3445556677 78888877 667665678999999999999999998854 44 799999999999999
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
.++..|.+++.++++. .++.+|+++|++++++++++|++++|+||+|.+.| +++|.++|+++ |+++|+|++|+++
T Consensus 174 ~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~la~~~-g~~livD~a~~~~ 248 (497)
T 3mc6_A 174 AAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGKIAQKY-KLPLHVDSCLGSF 248 (497)
T ss_dssp HHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTTHHHHT-TCCEEEETTTTHH
T ss_pred HHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHHHHHHh-CCEEEEECcchhh
Confidence 9999999999999874 35679999999999999999999999999999999 88999999999 9999999999865
Q ss_pred ccC-----CCCcc-ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh-hccc----------cCCC-
Q 018665 156 IYA-----PATHT-SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQFT----------SGAS- 217 (352)
Q Consensus 156 ~~~-----~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-~~~~----------~~~~- 217 (352)
... +.... .+. . ...+.++++.|++|.++ ++.++|+++++++.+....... ..+. .+.+
T Consensus 249 ~~~f~~~~~~~~~~~~~-~-~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 325 (497)
T 3mc6_A 249 IVSFMEKAGYKNLPLLD-F-RVPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPG 325 (497)
T ss_dssp HHGGGTTTTCCSCCCCS-T-TSTTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBH
T ss_pred hhhhhhhhcccCCcccc-c-cCCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcc
Confidence 321 11111 111 1 11345688999999975 7788999998877655432111 1110 0111
Q ss_pred --hHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcc-cCCceecCCCCceEEEeecCCccCCcccCCCCCCCh
Q 018665 218 --SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 294 (352)
Q Consensus 218 --~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
..++.++...+. ..++++..++..++++++.+.|++ ++|+.++.+..+.++++..++. +.
T Consensus 326 ~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~------------~~ 388 (497)
T 3mc6_A 326 AIVVGCWATMVNMG-----ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTL------------NI 388 (497)
T ss_dssp HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTT------------TH
T ss_pred hhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCC------------CH
Confidence 222333444443 466788888999999999999999 6899887555444455555432 78
Q ss_pred HHHHHHHHHccCEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 295 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.++.+.|.++ ||.+.++. .+..+|+++.. ++++++++++.|+++++++..
T Consensus 389 ~~l~~~L~~~-Gi~v~~~~---~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 389 HELSDRLSKK-GWHFNALQ---KPVALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp HHHHHHHHTT-TCBCEECC---SSCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhC-CEEEecCC---CCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8999999876 89887653 34578999987 889999999999999988765
No 126
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.98 E-value=2.2e-30 Score=239.26 Aligned_cols=324 Identities=13% Similarity=0.098 Sum_probs=206.1
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChH
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYP 74 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~ 74 (352)
|.+..+..+.+ +.+++++. ..+ ...++|++++|+++++..+++++. .+++.|++.+|+|+++.
T Consensus 64 ~~~~~~~~~~~------~~l~~~la~~~~--~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~ 135 (430)
T 3i4j_A 64 VHGSQFSSDVL------EEYAGRLARFVG--LPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGAS 135 (430)
T ss_dssp CCTTTCEEHHH------HHHHHHHHHHTT--CTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-----
T ss_pred ccccccCCHHH------HHHHHHHHHhCC--CCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCC
Confidence 43344555566 66666666 444 456799999999999999999875 34689999999999877
Q ss_pred HHHHhcCC---------------eEEEecccCCC-CcccCHHHHHhhcc----CCeeEEEEcCCCC-Cccc-CCCHHHHH
Q 018665 75 EMARIADA---------------TPVILPTRISE-NFLLDPKVLESKLT----EKSRLLILCSPSN-PTGS-VYPKNLLD 132 (352)
Q Consensus 75 ~~~~~~g~---------------~v~~i~~~~~~-~~~~d~~~l~~~l~----~~~~~i~i~~p~n-ptG~-~~~~~~l~ 132 (352)
..+...+. ++..++.+... ....|++.|+++++ +++++++++.++| ++|. .++.++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~ 215 (430)
T 3i4j_A 136 LGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYE 215 (430)
T ss_dssp --------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHH
T ss_pred cccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHH
Confidence 54443322 23333332110 01235688888886 4455555555577 8886 56788899
Q ss_pred HHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh---
Q 018665 133 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI--- 208 (352)
Q Consensus 133 ~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~--- 208 (352)
+|.++|+++ |+++|+||+|.++.+.+.. .+....+...++ +.++||.++ +| +|+||+++++++++.+...
T Consensus 216 ~l~~l~~~~-~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~d---i~t~sK~l~-~G~~r~G~~~~~~~i~~~~~~~~~~ 289 (430)
T 3i4j_A 216 RVRDICDEA-GIIFIADEVMSGMGRCGSP-LALSRWSGVTPD---IAVLGKGLA-AGYAPLAGLLAAPQVYETVMGGSGA 289 (430)
T ss_dssp HHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGTTTCCCS---EEEECGGGT-TTSSCCEEEEECHHHHHHHHHTTCB
T ss_pred HHHHHHHHc-CCEEEEechhhCCCcccch-hhhhhhcCCCCc---EEEEccccc-CCccccEEEEECHHHHHHHhccCCc
Confidence 999999999 9999999999988766542 222222011122 446899998 69 9999999999999998863
Q ss_pred -hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccC
Q 018665 209 -QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 287 (352)
Q Consensus 209 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 287 (352)
....+++.|++.+.++.++++.... ++..++.++..+..++.+.+.+++++++..+.+.+ .++++.+++......
T Consensus 290 ~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~-- 365 (430)
T 3i4j_A 290 FMHGFTYAGHPVSVAAGLSVLDIVER-EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTG-LLLGVVLGDLATGQA-- 365 (430)
T ss_dssp CCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET-TEEEEEEC---------
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE-EEEEEEeccccccCC--
Confidence 3445678999999999999874211 23344444445555555555554556666665554 456677653210000
Q ss_pred CCCCCChHHHHHHHHHccCEEeccCCCCC---CCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 288 FGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 288 ~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+.+.....++.+.|+++ ||.+.|+..+. .++++||+++. +++++++++++|+++++++
T Consensus 366 ~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 366 FETPGIASRIGAAALKR-GLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp -----CHHHHHHHHHHT-TEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhC-CCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 00001346788988866 99999873221 25789999984 8999999999999999865
No 127
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.97 E-value=1.5e-30 Score=238.51 Aligned_cols=286 Identities=11% Similarity=0.133 Sum_probs=217.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CEEEecCCCCCChHHHHHhcCC----------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA---------- 82 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~~-~~vl~~~~~~~~~~~~~~~~g~---------- 82 (352)
+.+++++ ..+++++++|+++++..++.++.. ++ ++|++++|+|+++...+...+.
T Consensus 88 ~~la~~~-------~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T 4adb_A 88 KKLIDAT-------FADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAP 160 (406)
T ss_dssp HHHHHHS-------SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCS
T ss_pred HHHHhhC-------CCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCC
Confidence 5565554 356999999999999999998754 44 8999999999998755554443
Q ss_pred ---eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCC--CHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 83 ---TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 83 ---~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
++..++. .|+++|++++++++++|+++ |+||+|.++ +.+++++|+++|+++ |+++|+||+|+++.+
T Consensus 161 ~~~~~~~~~~-------~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~ 231 (406)
T 4adb_A 161 LPADIRHAAY-------NDINSASALIDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRH-NALLIFDEVQTGVGR 231 (406)
T ss_dssp CCSSEEEECT-------TCHHHHHTTCSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTT
T ss_pred CCCCceEeCC-------CcHHHHHHHhcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCc
Confidence 3333332 38999999999899998888 999999887 899999999999999 999999999998766
Q ss_pred CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHH
Q 018665 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
.+... ....... ..+ +.|+||.++ +|+|+||+++++++++.+.......+++++++.+.++.++++... .
T Consensus 232 ~g~~~-~~~~~~~-~~d---~~t~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~- 301 (406)
T 4adb_A 232 TGELY-AYMHYGV-TPD---LLTTAKALG-GGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELIN---T- 301 (406)
T ss_dssp TSSSS-HHHHHTC-CCS---EEEECGGGG-TTSCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHS---S-
T ss_pred cchhH-HHHhcCC-CCC---EEEechhhc-CCCCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH---h-
Confidence 65422 1111111 122 226799999 999999999999999888766666677899999999999887521 1
Q ss_pred HHHHHHHHHHHHHHHHHHhccc----CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
++..++++++++++.+.|+++ +.+.. .+..|.++++.+++... .+..++.+.|.++ ||.+.+++
T Consensus 302 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~---------~~~~~~~~~l~~~-gi~v~~~~ 369 (406)
T 4adb_A 302 -PEMLNGVKQRHDWFVERLNTINHRYGLFSE-VRGLGLLIGCVLNADYA---------GQAKQISQEAAKA-GVMVLIAG 369 (406)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCCEEE-EEEETTEEEEEECTTTT---------TCHHHHHHHHHHT-TEECEESS
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHhCCCceE-EEEEEEEEEEEEeCCcH---------HHHHHHHHHHHHC-CcEEeecC
Confidence 466677777888888877764 11211 12346668888765310 1578899999877 99999864
Q ss_pred CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 314 AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 314 ~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
++++|++++. +++++++++++|+++++++..
T Consensus 370 ----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 370 ----GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp ----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7899997655 899999999999999988765
No 128
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.97 E-value=1.1e-30 Score=241.48 Aligned_cols=306 Identities=13% Similarity=0.096 Sum_probs=208.6
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHhc------------CCeEE
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIA------------DATPV 85 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~~------------g~~v~ 85 (352)
..+++.+. ..+ .+.++|++++|+++++..+++.+. ..+++|++.+|.|++........ ...+.
T Consensus 88 ~~l~~~la~~~~--~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (433)
T 1zod_A 88 VDLATRLANITP--PGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSF 165 (433)
T ss_dssp HHHHHHHHHHSC--TTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEE
T ss_pred HHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCce
Confidence 44555554 333 357899999999999999998653 34579999999998766543321 11344
Q ss_pred EecccCC--CCc--------ccCHHHHHhhcc----CCeeEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 86 ILPTRIS--ENF--------LLDPKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 86 ~i~~~~~--~~~--------~~d~~~l~~~l~----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
.++++.. .++ .+|++.|+++++ +++++++++..+||+|. .++.+++++|.++|+++ |+++|+||
T Consensus 166 ~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DE 244 (433)
T 1zod_A 166 AIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEAR-GMLLILDE 244 (433)
T ss_dssp EECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHH-TCEEEEEC
T ss_pred EecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHh-CCEEEEec
Confidence 4444321 111 246899999886 35555555444688995 57788999999999999 99999999
Q ss_pred cccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhc--cccCCChHHHHHHHHHh
Q 018665 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAAL 228 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 228 (352)
+|+++.+.+.. ..+..... ..+ +.|+||.+| +|+|+||+++++++++.+...... .+++.|++.+.++.+++
T Consensus 245 v~~~~g~~g~~-~~~~~~~~-~~d---i~s~sK~~~-~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal 318 (433)
T 1zod_A 245 AQTGVGRTGTM-FACQRDGV-TPD---ILTLSKTLG-AGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVL 318 (433)
T ss_dssp TTTTTTTTSSS-STHHHHTC-CCS---EEEECHHHH-TTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHH
T ss_pred cccCCCcCchH-hHHhhcCC-CCC---EEEeccccc-CCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence 99987655431 11111111 112 458999999 599999999999999888763222 56678999999888888
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHhccc----CCceecCCCCceEEEeecCCccCC-cccCCCCCCChHHHHHHHHH
Q 018665 229 GLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQGAFYLFIDFSTYYGS-EAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 303 (352)
+.. .+ +...++++++++++.+.|+++ +.+....+ .|.++++++++.... .+.. ....++.+.|.+
T Consensus 319 ~~~---~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~----~~~~~~~~~l~~ 388 (433)
T 1zod_A 319 DVV---QR--DGLVARANVMGDRLRRGLLDLMERFDCIGDVRG-RGLLLGVEIVKDRRTKEPAD----GLGAKITRECMN 388 (433)
T ss_dssp HHH---HH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTEEEEEEEEETTTTEECT----THHHHHHHHHHH
T ss_pred HHH---Hh--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE-EEEEEEEEEecCccccCCCh----HHHHHHHHHHHH
Confidence 641 11 234556666666676666553 44444443 355677887642100 0000 136788888886
Q ss_pred ccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 304 KAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 304 ~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+ ||.+.||..++.++++||+++. +++++++++++|+++++++
T Consensus 389 ~-Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 389 L-GLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp T-TEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred C-CCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 5 9999998766555899998764 8999999999999998764
No 129
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.97 E-value=1.7e-30 Score=239.10 Aligned_cols=288 Identities=10% Similarity=0.125 Sum_probs=211.1
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CEEEecCCCCCChHH-HHHhcCCe-------
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS-------PG-DEVIIPAPFWVSYPE-MARIADAT------- 83 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~~-~~vl~~~~~~~~~~~-~~~~~g~~------- 83 (352)
+.+++.+. .. ..+++++++|+++|++.+++++.. ++ ++|++++|+|+++.. .+...|.+
T Consensus 102 ~~l~~~la~~~----g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~ 177 (420)
T 2pb2_A 102 LRLGRKLIDAT----FAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFG 177 (420)
T ss_dssp HHHHHHHHHHS----SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSS
T ss_pred HHHHHHHHhhC----CCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCC
Confidence 55555554 22 258999999999999999998764 55 589999999987654 44445543
Q ss_pred -----EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 84 -----PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 84 -----v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
+..++. .|+++|++++++++++|++++++|++| .+++.+++++|.++|+++ |+++|+||+|.++.+
T Consensus 178 p~~~~~~~~~~-------~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~-gi~lI~Dev~~g~~~ 249 (420)
T 2pb2_A 178 PKPADIIHVPF-------NDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEH-QALLVFDEVQCGMGR 249 (420)
T ss_dssp SCCSCEEEECT-------TCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTT
T ss_pred CCCCCeEEecC-------CCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHc-CCEEEEEcCCcCccc
Confidence 444442 289999999988999999888888888 468999999999999999 999999999988766
Q ss_pred CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHH
Q 018665 158 APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
.|... .+..... .++ + .|+||.+| +|+|+|++++++++++.+.......++++|++.+.++.++++... +
T Consensus 250 ~g~~~-~~~~~~~-~~d-i--it~sK~l~-~G~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~---~- 319 (420)
T 2pb2_A 250 TGDLF-AYMHYGV-TPD-I--LTSAKALG-GGFPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIIN---T- 319 (420)
T ss_dssp TSSSS-HHHHHTC-CCS-E--EEECGGGG-TTSCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHS---S-
T ss_pred CCcHH-HHHhcCC-CCC-e--EEeccccc-CCCceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHH---h-
Confidence 55421 1111111 122 2 27899999 899999999999887766543344556789999999988887521 1
Q ss_pred HHHHHHHHHHHHHHHHHHhccc----CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 313 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~ 313 (352)
+++.++++++++++.+.|+++ +.+....+ .|.+++++++.... .+..++.+.|.++ ||.+.+++
T Consensus 320 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~---------~~~~~l~~~l~~~-Gi~v~~~~ 387 (420)
T 2pb2_A 320 -PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRG-MGLLIGAELKPKYK---------GRARDFLYAGAEA-GVMVLNAG 387 (420)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE-ETTEEEEEECGGGT---------TCHHHHHHHHHHT-TEECEESS
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-cceEEEEEECCCch---------HHHHHHHHHHHHC-CCEEEeCC
Confidence 355667777777887777654 33333343 35667788764210 1477899998875 99999874
Q ss_pred CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 314 AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 314 ~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
++++|++++. +++++++++++|+++++++
T Consensus 388 ----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 388 ----ADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp ----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6899999764 9999999999999998764
No 130
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.97 E-value=2e-30 Score=241.26 Aligned_cols=310 Identities=12% Similarity=0.117 Sum_probs=219.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCC-CChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~-~~~~~~~~~~g 81 (352)
.|.+.++..+++ ++++++++ .+++++++|+++++..++.+++++|| +++.|+| ..+...++..|
T Consensus 70 ~y~~~~~~~~l~------~~la~~~~-------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G 134 (456)
T 2ez2_A 70 AYAGSENFYHLE------RTVQELFG-------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNG 134 (456)
T ss_dssp CSSSCHHHHHHH------HHHHHHHC-------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTT
T ss_pred hcccChhHHHHH------HHHHHHhC-------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcC
Confidence 477777888899 99999984 45899999999999999999999998 7888999 66688999999
Q ss_pred CeEEEecccCC----C----CcccCHHHHHhhccCCe----eEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 82 ATPVILPTRIS----E----NFLLDPKVLESKLTEKS----RLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 82 ~~v~~i~~~~~----~----~~~~d~~~l~~~l~~~~----~~i~i~~p~n-ptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.+++.++++.+ . ++.+|+++|++++++++ ++|++++|+| |||.+++.+++++|+++|+++ |+++|+
T Consensus 135 ~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~-~i~li~ 213 (456)
T 2ez2_A 135 AVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAH-GIKVFY 213 (456)
T ss_dssp CEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHT-TCCEEE
T ss_pred CEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHc-CCeEEE
Confidence 99999998732 1 35789999999997544 8899999988 999999999999999999999 999999
Q ss_pred cccccc----------cccCCCCccccc-cCCCCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhcc----
Q 018665 149 DEIYEH----------IIYAPATHTSFA-SLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF---- 212 (352)
Q Consensus 149 D~~~~~----------~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~---- 212 (352)
||+|+. +.+.+....++. .... ..+++ +.|++|..+ +| +.||+++ ++++++.+.......
T Consensus 214 De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d~~-~~S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~ 289 (456)
T 2ez2_A 214 DATRCVENAYFIKEQEQGFENKSIAEIVHEMFS-YADGC-TMSGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYEGMP 289 (456)
T ss_dssp ECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHT-TCSEE-EEETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHTCCT
T ss_pred EccccccccccccccccccCCcchhhhhhhhcc-cCCEE-EEeCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhccCcc
Confidence 999986 334442111110 0011 12334 447888765 56 6899998 688888776543221
Q ss_pred -ccCCChHHHHH-HHHHhcccCCChHHH-HHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCC---ccCCccc
Q 018665 213 -TSGASSISQKA-GVAALGLGYAGGEVV-SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST---YYGSEAE 286 (352)
Q Consensus 213 -~~~~~~~~~~~-~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~---~~~~~~~ 286 (352)
..+.+.....+ +.+.++ .+ ++..++.+++.+++.+.|++. |+.+..+.+++++|+.++. ..+ ..
T Consensus 290 ~~~~~~~~~~~a~a~~~~~-------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~~~~~~~~~~--~~ 359 (456)
T 2ez2_A 290 SYGGLAGRDMEAMAIGLRE-------AMQYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFCEHLT--QD 359 (456)
T ss_dssp TTTTCCHHHHHHHHHHHHH-------HTCHHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEEHHHHTTTSC--GG
T ss_pred cccCcchhHHHHHHHHHHH-------HhHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEhHHhcCCCC--hh
Confidence 12234333333 222222 12 334445555667777888775 7877778888889988642 110 00
Q ss_pred CCCCCCC-hHHHHHHHHHccCEEecc-CCCC------------CCCCeEEEEee---cCHHHHHHHHHHHHHHHhhhC
Q 018665 287 GFGKIEN-SESLCRYLLDKAQVALVP-GDAF------------GDDTCIRISYA---ASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 287 ~~~~~~~-~~~~~~~l~~~~gi~i~~-g~~~------------~~~~~iRi~~~---~~~~~l~~~~~~l~~~~~~~~ 347 (352)
.- ...+.+.|+++.||.+.+ |..| ...+++|++++ .+++++++++++|++++++..
T Consensus 360 -----~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 360 -----EFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp -----GCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred -----hccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 01 334477775455998765 3322 12378999999 589999999999999997654
No 131
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.97 E-value=5.9e-30 Score=233.74 Aligned_cols=278 Identities=13% Similarity=0.107 Sum_probs=205.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CCCCEEEecCCCCCChHHHHHhcC-------------CeEEEecccCCCCc
Q 018665 36 PDQILVSNGAKQSILQAVLAVC-------SPGDEVIIPAPFWVSYPEMARIAD-------------ATPVILPTRISENF 95 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~-------~~~~~vl~~~~~~~~~~~~~~~~g-------------~~v~~i~~~~~~~~ 95 (352)
.+++++++|+++++..+++.+. .++++|++++|+|+++.......+ .++..++.
T Consensus 93 ~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 166 (395)
T 3nx3_A 93 LERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY------ 166 (395)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT------
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC------
Confidence 6899999999999999998764 346899999999988764444332 34444442
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
.|+++|+++++++++++++++++|++|.. ++.+++++|.++|+++ |+++|+||+|.++...+.. ...... +.
T Consensus 167 -~d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~~~g~~g~~-~~~~~~----~~ 239 (395)
T 3nx3_A 167 -NDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEK-DILLIADEIQCGMGRSGKF-FAYEHA----QI 239 (395)
T ss_dssp -TCHHHHHTTCCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGG----TC
T ss_pred -CCHHHHHHhccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCCcCCcc-hhHHhc----CC
Confidence 27999999999889998888887777766 6788899999999999 9999999999987655431 111111 11
Q ss_pred eEEEeccccccccccceeEEEEcChhH-HHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
...+.|+||.++ +|+|+|++++++++ ++.+.......+++.+++.+.++.++++.... ++..++..+..+..++.+.
T Consensus 240 ~~d~~t~sK~~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~ 317 (395)
T 3nx3_A 240 LPDIMTSAKALG-CGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE-EKILENVNKLTPYLEQSLD 317 (395)
T ss_dssp CCSEEEECGGGT-TTSCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeccccc-CCCceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH
Confidence 123567899998 68999999999998 88776654556678899999999998874211 2334444444444455555
Q ss_pred HHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHH
Q 018665 254 KSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTT 331 (352)
Q Consensus 254 ~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~ 331 (352)
+.+.+++.+.... ..|.++++.+++.. +..++.+.|.++ ||.+.+++ ++++|++++. ++++
T Consensus 318 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~-----------~~~~~~~~l~~~-Gi~v~~~~----~~~iRi~~~~~~t~e~ 380 (395)
T 3nx3_A 318 ELINEFDFCKKRK-GLGFMQGLSLDKSV-----------KVAKVIQKCQEN-ALLLISCG----ENDLRFLPPLILQKEH 380 (395)
T ss_dssp HHHHHCTTEEEEE-EETTEEEEEECTTS-----------CHHHHHHHHHHT-TEECEEET----TTEEEECCCTTCCHHH
T ss_pred HHHHhCCCeEEEE-eEEEEEEEEeCCcc-----------hHHHHHHHHHHC-CCEEecCC----CCEEEEECCCCCCHHH
Confidence 5444455444443 34556788877531 678899998876 99999864 7899998766 8999
Q ss_pred HHHHHHHHHHHHhh
Q 018665 332 LQAAVERIKKGLLT 345 (352)
Q Consensus 332 l~~~~~~l~~~~~~ 345 (352)
+++++++|++++++
T Consensus 381 i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 381 IDEMSEKLRKALKS 394 (395)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 132
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.97 E-value=6.1e-30 Score=236.22 Aligned_cols=292 Identities=12% Similarity=0.077 Sum_probs=210.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc---C----CCCEEEecCCCCCChHHHHHh-cC-----------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC---S----PGDEVIIPAPFWVSYPEMARI-AD----------- 81 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~----~~~~vl~~~~~~~~~~~~~~~-~g----------- 81 (352)
+.++++++ .++++|++++|++++++.+++++. + ++++|++++|.|+++...... .+
T Consensus 93 ~~la~~~~-----~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~ 167 (429)
T 1s0a_A 93 RKLVAMTP-----QPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKG 167 (429)
T ss_dssp HHHHHHSC-----TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTT
T ss_pred HHHHHhCC-----CCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccC
Confidence 55555543 467899999999999999988653 2 578999999999886543322 11
Q ss_pred --CeEEEecccCC---CCc-ccCHHHHHhhcc---CCeeEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 82 --ATPVILPTRIS---ENF-LLDPKVLESKLT---EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 82 --~~v~~i~~~~~---~~~-~~d~~~l~~~l~---~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
..+..++++.. ..+ .+|+++|+++++ +++++++++.+ +||||. ..+.+++++|+++|+++ |+++|+||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~-~~~li~De 246 (429)
T 1s0a_A 168 YLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE-GILLIADE 246 (429)
T ss_dssp TSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHH-TCEEEEEC
T ss_pred CCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEee
Confidence 13455555421 123 478999999886 45666665555 689995 56788899999999999 99999999
Q ss_pred cccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhh-----hccccCCChHHHHHH
Q 018665 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQ-----SQFTSGASSISQKAG 224 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 224 (352)
+|.++.+.+.. ..+..... ..+ +.|+||.++ +| +|+||+++++++++.+.... ...++++|++.+.++
T Consensus 247 ~~~~~g~~g~~-~~~~~~~~-~~d---~~t~sK~l~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~ 320 (429)
T 1s0a_A 247 IATGFGRTGKL-FACEHAEI-APD---ILCLGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAA 320 (429)
T ss_dssp TTTTTTTTSSS-SGGGGGTC-CCS---EEEECGGGG-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHH
T ss_pred hhhCCcccchH-HHhhhcCC-CCC---EEEeccccc-CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHH
Confidence 99987654431 12211111 122 347899998 78 99999999999988886531 234567899999999
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHH
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 301 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (352)
.++++.. .+ ++..++++++++++.+.|+++ +++....+. |.++++++++.. +..++.+.|
T Consensus 321 ~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~~~~~~~~-----------~~~~l~~~l 383 (429)
T 1s0a_A 321 NASLAIL---ES--GDWQQQVADIEVQLREQLAPARDAEMVADVRVL-GAIGVVETTHPV-----------NMAALQKFF 383 (429)
T ss_dssp HHHHHHH---HT--CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEE-TTEEEEEESSCB-----------CHHHHHHHH
T ss_pred HHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEe-eEEEEEEECCcc-----------cHHHHHHHH
Confidence 8888741 11 245566777888888888765 455544444 456888887532 678899998
Q ss_pred HHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 302 LDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 302 ~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
.++ ||.+.+. .+++||+++. +++++++++++|++++++++
T Consensus 384 ~~~-Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 384 VEQ-GVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp HHT-TEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHTSSGG
T ss_pred HHC-CCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 865 9999874 3799999764 99999999999999987654
No 133
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.97 E-value=1.5e-29 Score=231.32 Aligned_cols=298 Identities=14% Similarity=0.183 Sum_probs=224.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++..+..+++ +.++++++ .+++++++|+++++..++.++ +++||+|+++.|+|.++...++..|
T Consensus 58 ~y~~~~~~~~l~------~~la~~~~-------~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g 124 (399)
T 2oga_A 58 RYLLGPELEGFE------AEFAAYCE-------TDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVSATG 124 (399)
T ss_dssp CCSSSHHHHHHH------HHHHHHTT-------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTT
T ss_pred CCCCchhHHHHH------HHHHHHHC-------CCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHCC
Confidence 466667778888 99999985 236788888899999999999 8899999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~~ 160 (352)
.+++.+++++ +++.+|+++|++++++++++|+ ++||+|...+ +++|.++|+++ |+++|+|++|+.+. +++.
T Consensus 125 ~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~ 196 (399)
T 2oga_A 125 ATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD---MDALRELADRH-GLHIVEDAAQAHGARYRGR 196 (399)
T ss_dssp CEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHH-TCEECEECTTCTTCEETTE
T ss_pred CEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC---HHHHHHHHHHc-CCEEEEECcccccCccCCe
Confidence 9999999874 3467899999999988888776 5789999999 99999999999 99999999998642 2221
Q ss_pred CccccccCCCCCCceEEEecc--ccccccccceeEEEEcC-hhHHHHHHhhhhc------------cccCCChHHHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQ------------FTSGASSISQKAGV 225 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 225 (352)
.+... .++++.|+ +|.+|.+| +.|+++++ +++++.+...... ++..++.+.+.++.
T Consensus 197 ---~~~~~-----~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~ 267 (399)
T 2oga_A 197 ---RIGAG-----SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLR 267 (399)
T ss_dssp ---ETTCT-----TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHH
T ss_pred ---ecccc-----cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHH
Confidence 11111 24888888 79998668 89999886 7888877654322 11245666666666
Q ss_pred HHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 226 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
+.++. +++..++.+++.+++.+.|++++++.+.. +..+.++|+.++-.. .+..++.+.|.++
T Consensus 268 ~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~L~~~ 330 (399)
T 2oga_A 268 IRLAH-------LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT----------ERRDELRSHLDAR 330 (399)
T ss_dssp HHHHT-------HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC----------SSHHHHHHHHHHT
T ss_pred HHHHH-------HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC----------CCHHHHHHHHHHC
Confidence 66643 34455666777888999999888877643 444444443332110 1678899998875
Q ss_pred cCEEeccCCCC-----------C-----C-------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 305 AQVALVPGDAF-----------G-----D-------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 305 ~gi~i~~g~~~-----------~-----~-------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
||.+.++... + . .+++||+++. +++|++++++.|++++++++.
T Consensus 331 -gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~~ 398 (399)
T 2oga_A 331 -GIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERVDQ 398 (399)
T ss_dssp -TBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC-
T ss_pred -CCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999875311 0 0 1579999986 899999999999999987643
No 134
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.97 E-value=1.6e-30 Score=237.57 Aligned_cols=287 Identities=14% Similarity=0.117 Sum_probs=208.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChH-HHHHhcCCeEEE---ecccCCCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADATPVI---LPTRISEN 94 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~-~~~~~~g~~v~~---i~~~~~~~ 94 (352)
+.++++++ .++++|++++|+++++..++.++. .++++|++++|+|++.. ..++..|.++.. .|+..+..
T Consensus 94 ~~la~~~~-----~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~ 168 (395)
T 1vef_A 94 RTLTAILP-----PELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVE 168 (395)
T ss_dssp HHHHHTSC-----TTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEE
T ss_pred HHHHHhcC-----CCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCee
Confidence 55555542 467899999999999999998763 56789999999987644 466666765211 12111000
Q ss_pred --cccCHHHHHhhccCCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc-cccccCCC
Q 018665 95 --FLLDPKVLESKLTEKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPG 170 (352)
Q Consensus 95 --~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~-~~~~~~~~ 170 (352)
...|+++|++++++++++|+++.++||||... +.+++++|.++|+++ |+++|+||+|+++.+.+... .......
T Consensus 169 ~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~-~~~li~Dea~~~~~~~g~~~~~~~~~~~- 246 (395)
T 1vef_A 169 FIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEK-GALLILDEIQTGMGRTGKRFAFEHFGIV- 246 (395)
T ss_dssp EECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSTHHHHTCC-
T ss_pred EeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHc-CCEEEEEecccCCccCCchhHhhhcCCC-
Confidence 01489999999988888888777788999765 688899999999999 99999999999765444321 1111111
Q ss_pred CCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHH
Q 018665 171 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 250 (352)
Q Consensus 171 ~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
.+ + .|+||.++ +|+|+|++++++++++.+.......+++++++.+.++.++++. ... ++..++++++++
T Consensus 247 --~d-~--~s~sK~~~-~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~----~~~-~~~~~~~~~~~~ 315 (395)
T 1vef_A 247 --PD-I--LTLAKALG-GGVPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRY----LER-TRLWERAAELGP 315 (395)
T ss_dssp --CS-E--EEECGGGG-TTSSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHH----HHH-HTTHHHHHHHHH
T ss_pred --CC-E--EEEccccc-CCCceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHH----HHh-CCHHHHHHHHHH
Confidence 22 2 28899999 5899999999998877665533344567888899888888874 222 456778888889
Q ss_pred HHHHHhcccCCceec--CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec-
Q 018665 251 FLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA- 327 (352)
Q Consensus 251 ~l~~~l~~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~- 327 (352)
++.+.|++++. .+. .+..|.++++++++ +..++.+.|.++.||.+.++ .++++|++++.
T Consensus 316 ~l~~~l~~~~~-~~~~~~~~~g~~~~~~~~~-------------~~~~l~~~l~~~~gi~v~~~----~~~~iRi~~~~~ 377 (395)
T 1vef_A 316 WFMEKLRAIPS-PKIREVRGMGLMVGLELKE-------------KAAPYIARLEKEHRVLALQA----GPTVIRFLPPLV 377 (395)
T ss_dssp HHHHHHHTSCC-TTEEEEEEETTEEEEEESS-------------CSHHHHHHHHHHHCEECEES----STTEEEECCCTT
T ss_pred HHHHHHHHhhc-CceEEEEEEEEEEEEEEcC-------------hHHHHHHHHHHHCCeEEecC----CCCEEEEeCCCC
Confidence 99999987632 211 23456678888764 46788888883349999986 36899998874
Q ss_pred -CHHHHHHHHHHHHHHH
Q 018665 328 -SLTTLQAAVERIKKGL 343 (352)
Q Consensus 328 -~~~~l~~~~~~l~~~~ 343 (352)
+++++++++++|++++
T Consensus 378 ~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 378 IEKEDLERVVEAVRAVL 394 (395)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 8999999999999876
No 135
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=1.7e-30 Score=240.15 Aligned_cols=292 Identities=13% Similarity=0.086 Sum_probs=204.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCCh-----------------HH
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSY-----------------PE 75 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~-----------------~~ 75 (352)
+.++++++ +++++|++++|+++++..++.++. ++||+|+++.|+|..+ ..
T Consensus 68 ~~la~~~g-----~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~ 142 (432)
T 3a9z_A 68 ASLAKMIG-----GKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEH 142 (432)
T ss_dssp HHHHHHHT-----CCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHcC-----CCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHH
Confidence 99999986 567899999999999999999885 4789999999999875 33
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC----------EE
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR----------LL 145 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~----------~~ 145 (352)
.++..|.+++.++++. .++.+|+++|++++++++++|++++|+||||.++| +++|.++|+++ + ++
T Consensus 143 ~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~-~~~~~~~~~~~~~ 217 (432)
T 3a9z_A 143 LVEDQVAEVTFVPVSK-VNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKAL-NQIRAASGLPRVL 217 (432)
T ss_dssp HHHTTSCEEEEECCCT-TTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHH-HHHHHHHTCCCCE
T ss_pred HHHhcCcEEEEEecCc-ccCCcCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhc-CcccccccCCceE
Confidence 4456799999999874 23468999999999989999999999999999999 78899999999 8 99
Q ss_pred EEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhH-HHHHHhh-------hhccccCCC
Q 018665 146 VLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNKI-------QSQFTSGAS 217 (352)
Q Consensus 146 livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~-~~~~~~~-------~~~~~~~~~ 217 (352)
+|+|++|+.+ .....+... +..+++.|+||.+| .++||++++++. ...+... .....++++
T Consensus 218 livDea~~~~----~~~~~~~~~----~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (432)
T 3a9z_A 218 VHTDAAQALG----KRRVDVEDL----GVDFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTEN 286 (432)
T ss_dssp EEEECTTTTT----TSCCCHHHH----CCSEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCC
T ss_pred EEEEchhhhC----CcccChhhc----CCCEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcC
Confidence 9999999753 222222222 22367899999875 459999998765 2222211 122334578
Q ss_pred hHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec--CC-----CCceEEEeecCCccCCcccCCCC
Q 018665 218 SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS--EP-----QGAFYLFIDFSTYYGSEAEGFGK 290 (352)
Q Consensus 218 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~-----~~g~~~~~~~~~~~~~~~~~~~~ 290 (352)
...+.++.++++. ..++++++.++++++++++.+.|++++|+.+. .+ ..+..+++.+++..
T Consensus 287 ~~~~~a~~aal~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 354 (432)
T 3a9z_A 287 TPMIAGLGKAADL---VSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ--------- 354 (432)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT---------
T ss_pred HHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC---------
Confidence 8888888777764 24567888899999999999999886565443 22 22334555555420
Q ss_pred CCChHHHHHHHHHccCEEeccCCCCC---------------C-----CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 291 IENSESLCRYLLDKAQVALVPGDAFG---------------D-----DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 291 ~~~~~~~~~~l~~~~gi~i~~g~~~~---------------~-----~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+..++.+.+ .++.+..|..+. . .+++||+++. +++|++++++.|++++++++.
T Consensus 355 -~~~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 355 -LRGYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp -CCHHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred -CcHHHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 0455565543 267776664332 1 3789999997 899999999999999988765
Q ss_pred C
Q 018665 349 G 349 (352)
Q Consensus 349 ~ 349 (352)
+
T Consensus 431 ~ 431 (432)
T 3a9z_A 431 P 431 (432)
T ss_dssp C
T ss_pred C
Confidence 4
No 136
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.97 E-value=8.3e-30 Score=232.21 Aligned_cols=297 Identities=17% Similarity=0.239 Sum_probs=219.7
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|.+.++..++| +.++++++ ..+.|++++ |++++..++.++ .++||+|+++.|+|.++...++..|
T Consensus 33 ~~~~~~~~~~l~------~~la~~~~------~~~~i~~~s-Gt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g 99 (388)
T 1b9h_A 33 WRMGGDEVNSFE------REFAAHHG------AAHALAVTN-GTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLG 99 (388)
T ss_dssp BTTTCSHHHHHH------HHHHHHTT------CSEEEEESC-HHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTT
T ss_pred eecCCHHHHHHH------HHHHHHhC------CCeEEEeCC-HHHHHHHHHHHcCCCCcCEEEECCCccHHHHHHHHHcC
Confidence 356677788899 99999986 235566665 589999999999 8899999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc-cccCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~-~~~~~~ 160 (352)
.+++.++++. +++.+|+++|++++++++++|+ |+||+|.+.+ +++|.++|+++ |+++|+|++|+. ..+.+.
T Consensus 100 ~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~~-~~~li~D~a~~~g~~~~~~ 171 (388)
T 1b9h_A 100 AVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISADT-GVPLLQDAAHAHGARWQGK 171 (388)
T ss_dssp CEEEEECBCT-TTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHH-TCCBCEECTTCTTCEETTE
T ss_pred CEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHHc-CCEEEEecchhcCCccCCe
Confidence 9999999874 3467899999999988888766 9999999998 89999999999 999999999985 323221
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChh-H--HHHHHhhhhc---------------cccCCChHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-F--VAACNKIQSQ---------------FTSGASSISQK 222 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~--~~~~~~~~~~---------------~~~~~~~~~~~ 222 (352)
.+..+ + ++.+.|+||..+++|.++|+++++++ + ++.+...... ++..++.+...
T Consensus 172 ---~~~~~----~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a 243 (388)
T 1b9h_A 172 ---RVGEL----D-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSAS 243 (388)
T ss_dssp ---EGGGS----S-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHH
T ss_pred ---ecccc----c-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHH
Confidence 12221 1 47788888554445568999998876 5 5655433211 11113433333
Q ss_pred HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC------CCCceEEEeecCCccCCcccCCCCCCChHH
Q 018665 223 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE------PQGAFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
++... .+++++..++++++++++.+.|++++++.+.. +.+++++|+.+++..+ .+..+
T Consensus 244 ~~~~~-------~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 307 (388)
T 1b9h_A 244 VLRAQ-------LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTE---------ERRNA 307 (388)
T ss_dssp HHHHH-------HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCH---------HHHHH
T ss_pred HHHHH-------HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCc---------ccHHH
Confidence 22222 34466677888889999999999888888765 3457789999875200 04667
Q ss_pred HHHHHHHccCEEeccCCCCC----------------------C-------CCeEEEEeec---CHHHHHHHHHHHHHHHh
Q 018665 297 LCRYLLDKAQVALVPGDAFG----------------------D-------DTCIRISYAA---SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~~~~----------------------~-------~~~iRi~~~~---~~~~l~~~~~~l~~~~~ 344 (352)
+.+.|.++ ||.+.++.... . .+.+||++.. +++|++++++.|+++++
T Consensus 308 l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 308 LVDRLVEA-GLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVA 386 (388)
T ss_dssp HHHHHHHT-TCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHC-CCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHh
Confidence 88888875 99998764210 0 1258999875 78999999999999886
Q ss_pred h
Q 018665 345 T 345 (352)
Q Consensus 345 ~ 345 (352)
+
T Consensus 387 ~ 387 (388)
T 1b9h_A 387 R 387 (388)
T ss_dssp H
T ss_pred h
Confidence 4
No 137
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=4e-30 Score=231.64 Aligned_cols=297 Identities=15% Similarity=0.139 Sum_probs=212.4
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEecCCCCCChH---HHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD--EVIIPAPFWVSYP---EMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~--~vl~~~~~~~~~~---~~~ 77 (352)
.|+++++..+++ +.++++++ . +..++++|+++++..++.++.+++| .|+++.+.|.... ...
T Consensus 42 ~y~~~~~~~~l~------~~la~~~~------~-~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~ 108 (357)
T 3lws_A 42 QYGTGAIIEPFE------QKFADVLG------M-DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLK 108 (357)
T ss_dssp ETTEETTHHHHH------HHHHHHHT------C-SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHH
T ss_pred cccCChHHHHHH------HHHHHHhC------C-CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhh
Confidence 477778888999 99999986 2 3345558888999999999888877 6666666544332 245
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCEEEEecccccc--
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-- 154 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~livD~~~~~-- 154 (352)
...|.+++.++. .++.+|+++|+++. +++++++++|+||+ |.+++.+++++|+++|+++ |+++|+|++|..
T Consensus 109 ~~~g~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~ 182 (357)
T 3lws_A 109 ELHPIETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRER-GIRLHLDGARLFEM 182 (357)
T ss_dssp HHSSCEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHT-TCEEEEEETTHHHH
T ss_pred hccCcEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHc-CCEEEEECchhhhh
Confidence 667999888874 33468999999884 38999999999998 9999999999999999999 999999999862
Q ss_pred cccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCC--ChHHHHHHHHHhcccC
Q 018665 155 IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGY 232 (352)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~ 232 (352)
..+.+.....+. ...+ +++.|+||.++.++ .|++++++++++.+......+..+. ....+.++..+++.
T Consensus 183 ~~~~~~~~~~~~---~~~d--~~~~s~sK~~~~~~--gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 253 (357)
T 3lws_A 183 LPYYEKTAAEIA---GLFD--SIYISFYKGLGGIA--GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL-- 253 (357)
T ss_dssp HHHHTCCHHHHH---TTSS--EEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--
T ss_pred hhhcCCChHHHH---hcCC--EEEEeccccCCCCc--eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH--
Confidence 111122112221 1122 45889999994232 2999999999998876554433222 23333334444432
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCceec-CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
+.+. .+++.++++++.+.|++++++.+. .+..++++|++++.... .+..++.+.|.++ ||.+.|
T Consensus 254 ----~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~-Gi~v~~ 318 (357)
T 3lws_A 254 ----RKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---------DISPKLEQVQEET-GLGFVG 318 (357)
T ss_dssp ----HTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---------HHHHHHHHHHHHH-CEESCS
T ss_pred ----HHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---------HHHHHHHHHHHhc-CeEEec
Confidence 2222 334567788899999998899884 56778889999875210 0256788887765 999999
Q ss_pred CCCCCCCC--eEEEEeec-----CHHHHHHHHHHHHHHH
Q 018665 312 GDAFGDDT--CIRISYAA-----SLTTLQAAVERIKKGL 343 (352)
Q Consensus 312 g~~~~~~~--~iRi~~~~-----~~~~l~~~~~~l~~~~ 343 (352)
|..+. ++ ++|+++.. +.+++++++++|++++
T Consensus 319 g~~~~-~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 319 YLVDK-DGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp CCEEC-SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred ccccC-CCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 86654 44 89999863 7799999999998875
No 138
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.97 E-value=8.6e-30 Score=234.40 Aligned_cols=288 Identities=13% Similarity=0.140 Sum_probs=203.6
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC-CCCEEEecCCCCCChHHH-HHhcC-------------CeE
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWVSYPEM-ARIAD-------------ATP 84 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-~~~~vl~~~~~~~~~~~~-~~~~g-------------~~v 84 (352)
..+++.+. ..+... +++|++++|+++++..+++++.. .+++|++++|+|+++... +...| ..+
T Consensus 89 ~~l~~~la~~~~~~~-~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (419)
T 2eo5_A 89 LELAKKLVTYSPGNF-QKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGV 167 (419)
T ss_dssp HHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTE
T ss_pred HHHHHHHHHhCCCCc-CCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCC
Confidence 44444444 344332 68999999999999999987643 378999999999865543 32211 256
Q ss_pred EEecccCCCC--cc------------cCHHHHH-hhcc-----CCeeEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCC
Q 018665 85 VILPTRISEN--FL------------LDPKVLE-SKLT-----EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHP 142 (352)
Q Consensus 85 ~~i~~~~~~~--~~------------~d~~~l~-~~l~-----~~~~~i~i~~p-~nptG~-~~~~~~l~~l~~~~~~~~ 142 (352)
+.++.+.... ++ +|+++|+ ++++ +++++++ ++| +||||. .++.+++++|.++|+++
T Consensus 168 ~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~l~~l~~~~- 245 (419)
T 2eo5_A 168 IHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIF-FEPIQGEGGYVIPPKNFFAELQKLAKKY- 245 (419)
T ss_dssp EEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHH-
T ss_pred EEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEE-EeCccCCCCCccCCHHHHHHHHHHHHHc-
Confidence 7777653211 11 3688999 8886 3445555 555 568896 66788999999999999
Q ss_pred CEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhccccCCChHHH
Q 018665 143 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQ 221 (352)
Q Consensus 143 ~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
|+++|+||+|.++.+.+.. ..+..... .++ +.|+||.+| +| +|+||++++++++ .+ ......+++.|++.+
T Consensus 246 ~~~li~DE~~~~~g~~g~~-~~~~~~~~-~~d---~~t~sK~~~-~G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~~~ 317 (419)
T 2eo5_A 246 GILLVDDEVQMGLGRTGKL-FAIENFNT-VPD---VITLAKALG-GGIMPIGATIFRKDLD-FK-PGMHSNTFGGNALAC 317 (419)
T ss_dssp TCEEEEECTTTTTTTTSSS-SGGGGGTC-CCS---EEEECGGGG-TTTSCCEEEEEEGGGC-CC-------CCCCCHHHH
T ss_pred CCEEEEeccccCCccCcch-hhHHhcCC-CCC---EEEeccccc-CCccceEEEEEchHhh-cC-CcccCCCCCCCHHHH
Confidence 9999999999988665531 11111111 222 337999999 69 9999999998877 66 323345677899999
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecC-CccCCcccCCCCCCChHHHHHH
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS-TYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
.++.++++. . +++.++++++++++.+.|+++ +....+ .|.+++++++ ... .+. +.+.
T Consensus 318 ~aa~aal~~----~---~~~~~~~~~~~~~l~~~L~~~--~~~~~~-~g~~~~i~~~~~~~-----------~~~-~~~~ 375 (419)
T 2eo5_A 318 AIGSKVIDI----V---KDLLPHVNEIGKIFAEELQGL--ADDVRG-IGLAWGLEYNEKKV-----------RDR-IIGE 375 (419)
T ss_dssp HHHHHHHHH----H---HHHHHHHHHHHHHHHHHHTTS--SSEEEE-ETTEEEEECSCHHH-----------HHH-HHHH
T ss_pred HHHHHHHHH----H---HHHHHHHHHHHHHHHHHHHHh--hhheEe-eeEEEEEEEecCcc-----------HHH-HHHH
Confidence 999999874 1 227788889999999999876 333333 3556778873 210 355 8888
Q ss_pred HHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 301 LLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 301 l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
|.++ ||.+.+++ ++++||+++. +++++++++++|+++++++
T Consensus 376 l~~~-Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 376 SFKR-GLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp HHHT-TEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHC-CCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 8865 99999864 6799998764 8999999999999998764
No 139
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.97 E-value=3.8e-29 Score=232.74 Aligned_cols=322 Identities=11% Similarity=0.025 Sum_probs=223.1
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChH
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYP 74 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~ 74 (352)
|....+..+.+ +.+++.+. ..+ ...++|++++|+++|++.+++++.. +++.|++.+++|+++.
T Consensus 87 ~~~~~~~~~~~------~~la~~l~~~~~--~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~ 158 (460)
T 3gju_A 87 HAYVGHGTEAS------ITLAKMIIDRAP--KGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSG 158 (460)
T ss_dssp CCCTTCCCHHH------HHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSS
T ss_pred ccccccCCHHH------HHHHHHHHhhCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCC
Confidence 33334455666 77777776 332 4567999999999999999998763 4689999999999877
Q ss_pred HHHHhcC-------------CeEEEecccCC---CCcccC--------HHHHHhhcc----CCeeEEEEcCCCCCccc-C
Q 018665 75 EMARIAD-------------ATPVILPTRIS---ENFLLD--------PKVLESKLT----EKSRLLILCSPSNPTGS-V 125 (352)
Q Consensus 75 ~~~~~~g-------------~~v~~i~~~~~---~~~~~d--------~~~l~~~l~----~~~~~i~i~~p~nptG~-~ 125 (352)
......+ ..+..++.+.. .+.+.+ +++|+++++ +++++|+++.++|++|. +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~ 238 (460)
T 3gju_A 159 VMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVP 238 (460)
T ss_dssp HHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBC
T ss_pred HHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCcc
Confidence 5544321 23445554321 111122 688888885 46677777766788886 6
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHH
Q 018665 126 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAA 204 (352)
Q Consensus 126 ~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~ 204 (352)
++.+++++|.++|++| |+++|+||+|+++.+.|... ....... ...+.++||.++ +| +|+|++++++++++.
T Consensus 239 ~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~~-~~~~~~~----~pdi~t~sK~l~-gG~~~lg~v~~~~~i~~~ 311 (460)
T 3gju_A 239 PPAGYWEKIQAVLKKY-DVLLVADEVVTGFGRLGTMF-GSDHYGI----KPDLITIAKGLT-SAYAPLSGVIVADRVWQV 311 (460)
T ss_dssp CCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSC-HHHHHTC----CCSEEEECGGGT-TTSSCCEEEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCEEEEeccccCCCcccccc-hHhhcCC----CCCeeeeehhhc-CCCCCeEEEEECHHHHHH
Confidence 7788899999999999 99999999999887665321 1111111 112457899997 56 899999999999998
Q ss_pred HHhh-------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeec
Q 018665 205 CNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 277 (352)
Q Consensus 205 ~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~ 277 (352)
+... ....+++.|++.++++.++++.... ++..+++.+..+..++.+.+.+++++.+..+.+.+ .++++++
T Consensus 312 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~ 389 (460)
T 3gju_A 312 LVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE-MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDG-MLAAVEF 389 (460)
T ss_dssp HHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEEEE
T ss_pred HhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeee-EEEEEEE
Confidence 8532 3445678999999999999984211 34566666666777777777777776666655444 4566666
Q ss_pred CCccCCcccCCC-CCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 278 STYYGSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 278 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
........ .+. ......++.+.|+++ ||.+.|++ .++++||+++. +++++++++++|+++++++.
T Consensus 390 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-Gv~v~~~~---~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 390 VADKDDRV-FFDASQKIGPQVATALAAS-GVIGRAMP---QGDILGFAPPLCLTREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp CSBTTTTB-CCCGGGCHHHHHHHHHHHT-TEECEECS---SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCccccc-cccchHHHHHHHHHHHHHC-CeEEecCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 53211000 000 000256788888876 99999875 35899999765 99999999999999998764
No 140
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=2e-29 Score=228.31 Aligned_cols=281 Identities=16% Similarity=0.097 Sum_probs=202.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeE
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 112 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~ 112 (352)
++++++++|+++++..++.++ +||+|+++.|+|+++.. .++..|.+++.+ .|+++++++ ++++++
T Consensus 76 ~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~ 143 (374)
T 2aeu_A 76 NDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTL 143 (374)
T ss_dssp TEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEE
T ss_pred cceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccE
Confidence 478999999999999999988 89999999998887554 677889998887 278999988 778999
Q ss_pred -EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccce
Q 018665 113 -LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 191 (352)
Q Consensus 113 -i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~ 191 (352)
|++++|+||||. +..++++|.++|+++ |+++|+||+|+.+........+... .+.++++.|+||.+ +|+|
T Consensus 144 ~v~~~~p~nptG~--~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~l--~g~~ 214 (374)
T 2aeu_A 144 VIITGSTMDLKVI--ELENFKKVINTAKNK-EAIVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKLM--EGPR 214 (374)
T ss_dssp EEEECBCTTSCBC--CHHHHHHHHHHHHHH-TCCEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSSS--SSCS
T ss_pred EEEEccCCCCCCC--CcccHHHHHHHHHHc-CCEEEEECCcccccccccccCCccc----cCCcEEEecCcccc--cCcc
Confidence 999999999996 556699999999999 9999999999875310000011111 13458899999996 4679
Q ss_pred eEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH----HHHHHHHhccc---CCcee
Q 018665 192 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER----RDFLVKSFGEL---EGVKM 264 (352)
Q Consensus 192 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~---~g~~~ 264 (352)
+||+++++++++.+......++.+++++.+.++.++++.. ..+.+++..+..+.. ++.+.+.|..+ +|+.+
T Consensus 215 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~ 292 (374)
T 2aeu_A 215 GGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNF--NLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVY 292 (374)
T ss_dssp CEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHC--CHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEE
T ss_pred eEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcce
Confidence 9999999999999887765556678889998888888762 122333333333333 56666666654 35665
Q ss_pred cCCCCceE-EEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-CCCeEEEEeec---CHHHHHHHHHHH
Q 018665 265 SEPQGAFY-LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-DDTCIRISYAA---SLTTLQAAVERI 339 (352)
Q Consensus 265 ~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-~~~~iRi~~~~---~~~~l~~~~~~l 339 (352)
..+..|++ .|...+.... ..+..+++..+++++||.+.||..|. .++++||+++. .+++++++.+.|
T Consensus 293 ~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l 364 (374)
T 2aeu_A 293 ERTPTGFVIKRVYKDDTIN--------IKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAI 364 (374)
T ss_dssp EECSSEEEEEEEESSHHHH--------HHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHH
T ss_pred eeCCceEEEEeeccccccc--------ccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHH
Confidence 44444444 4444332100 00112366666666699999987653 35699999975 223589999999
Q ss_pred HHHHhhhC
Q 018665 340 KKGLLTLR 347 (352)
Q Consensus 340 ~~~~~~~~ 347 (352)
+++++++.
T Consensus 365 ~~~l~~~~ 372 (374)
T 2aeu_A 365 VESIKMAF 372 (374)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988765
No 141
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.97 E-value=9.5e-30 Score=236.15 Aligned_cols=323 Identities=14% Similarity=0.089 Sum_probs=216.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~ 79 (352)
+|....+..+.+ ..+++.+. ..+.. ..++|++++|+++|++.+++.+.. .+++|++.+++|+++...+..
T Consensus 98 ~~~~~~~~~~~~------~~la~~l~~~~~~~-~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~ 170 (453)
T 4ffc_A 98 HTCFMVTPYEQY------VQVAELLNALTPGD-HDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMA 170 (453)
T ss_dssp CCTTTTSCCHHH------HHHHHHHHHHSSCS-SCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHH
T ss_pred ccccCcCCCHHH------HHHHHHHHHhCCCC-CCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHh
Confidence 344444556666 66667766 33321 257999999999999999987642 457999999999987755543
Q ss_pred cCC--------------eEEEecccCC--CCcccC--------HHHHHhhccCCeeEEEEcCCCCCcc--cCCCHHHHHH
Q 018665 80 ADA--------------TPVILPTRIS--ENFLLD--------PKVLESKLTEKSRLLILCSPSNPTG--SVYPKNLLDE 133 (352)
Q Consensus 80 ~g~--------------~v~~i~~~~~--~~~~~d--------~~~l~~~l~~~~~~i~i~~p~nptG--~~~~~~~l~~ 133 (352)
.+. .+..++.+.. +.++.+ ++.|++.+.++..+++++.|.|++| ..++.+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~ 250 (453)
T 4ffc_A 171 LTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLAT 250 (453)
T ss_dssp HCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHH
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHH
Confidence 311 4555555421 111222 4667777765556666667765554 4457788999
Q ss_pred HHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccc
Q 018665 134 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 213 (352)
Q Consensus 134 l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~ 213 (352)
|.++|++| |+++|+||+|.++.+.|.. ...... +....+.++||.++ +|+|+||+++++++++.+.......+
T Consensus 251 l~~l~~~~-~~llI~DEv~~g~g~~g~~-~a~~~~----~~~pdi~t~sK~~~-~G~~~G~~~~~~~i~~~~~~~~~~~t 323 (453)
T 4ffc_A 251 LTAWASEN-GVVFIADEVQTGFARTGAW-FASEHE----GIVPDIVTMAKGIA-GGMPLSAVTGRAELMDAVYAGGLGGT 323 (453)
T ss_dssp HHHHHHHH-TCEEEEECTTTTTTTTSSS-STHHHH----TCCCSEEEECGGGG-TTSSCEEEEEEHHHHTTSCTTSSCCS
T ss_pred HHHHHHHc-CCEEEEecCccCCCccccc-chhhhc----CCCcchHhhhhhhc-CCcCeEEEEECHHHHhhhcccCcCCC
Confidence 99999999 9999999999988666532 111111 11222567899998 58999999999999888876666677
Q ss_pred cCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCC
Q 018665 214 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 293 (352)
Q Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
++.|++.+.++.++++.... ++..++..+..+..++.+.+.+++++.+..+.+ .|.++++++.+........ ..
T Consensus 324 ~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~----~~ 397 (453)
T 4ffc_A 324 YGGNPVTCAAAVAALGVMRE-LDLPARARAIEASVTSRLSALAEEVDIIGEVRG-RGAMLAIEIVKPGTLEPDA----AL 397 (453)
T ss_dssp SSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEE-ETTEEEEEEBCTTSCCBCH----HH
T ss_pred CCcCHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe-eceEEEEEEecCcccCCCH----HH
Confidence 88999999999999874211 233444444444444455555455555554443 3556777764310000000 13
Q ss_pred hHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 294 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 294 ~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
..++.+.|+++ ||.+.|++.+ .+++|++++. +++++++++++|+++++++..
T Consensus 398 ~~~~~~~l~~~-Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 398 TKSIAAEALSQ-GVLILTCGTF--GNVIRLLPPLVIGDDLLDEGITALSDIIRAKAS 451 (453)
T ss_dssp HHHHHHHHHHT-TEECCEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhC-CCEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 56788888876 9999997644 4789998876 899999999999999988754
No 142
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=3.4e-29 Score=232.08 Aligned_cols=284 Identities=13% Similarity=0.130 Sum_probs=206.2
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCCeEEEecccCCCCc
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~~v~~i~~~~~~~~ 95 (352)
+.+++++. ..| .+++++++|+++++..++. ++++||+|+++.|.|.++... ++..|.+++.++.+
T Consensus 136 ~~l~~~la~~~g----~~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~----- 205 (464)
T 1ibj_A 136 DALESLLAKLDK----ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT----- 205 (464)
T ss_dssp HHHHHHHHHHHT----CSEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----
T ss_pred HHHHHHHHHHhC----CCeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----
Confidence 44444444 333 3478888888999987775 778999999999999988764 46689999999863
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|+++|++++++++++|++++|+||+|.+++ +++|+++|+++ |+++|+||+|... ....++. .+++
T Consensus 206 --d~~~l~~~i~~~tk~v~l~~p~NptG~v~~---l~~i~~la~~~-gi~livDea~~~g----~~~~~~~-----~~~d 270 (464)
T 1ibj_A 206 --KLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKISEMAHAQ-GALVLVDNSIMSP----VLSRPLE-----LGAD 270 (464)
T ss_dssp --SHHHHHHHCCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTT-TCEEEEECTTTCT----TTCCGGG-----TTCS
T ss_pred --CHHHHHHHhccCceEEEEeCCCCCCCEeec---HHHHHHHHHHc-CCEEEEECCCccc----ccCChhh-----cCCE
Confidence 899999999989999999999999999998 99999999999 9999999999752 1111221 3567
Q ss_pred EEEecccccccc-ccceeEEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAM-TGWRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 176 i~~~s~sK~~g~-~g~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
+++.|+||.++. +|+++|++++++ ++++.+.......+.+.+++.+.++.++++. ....+++.........+++.
T Consensus 271 iv~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~---~~~r~~~~~~~~~~l~~~l~ 347 (464)
T 1ibj_A 271 IVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT---MALRIEKQQENARKIAMYLS 347 (464)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHH
Confidence 999999999863 388999999985 7888887766555566788888888888764 12233333333333333333
Q ss_pred ----------HHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC-------
Q 018665 254 ----------KSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD------- 313 (352)
Q Consensus 254 ----------~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~------- 313 (352)
+.|+++|++.+..++ .|.++++++++. .....+.+.|.. .||.+.+|.
T Consensus 348 ~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~-----------~~~~~~~~~L~~-~gi~v~~G~~~sl~~~ 415 (464)
T 1ibj_A 348 SHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSV-----------ALSKHLVETTKY-FSIAVSFGSVKSLISM 415 (464)
T ss_dssp TCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCH-----------HHHHHHHHHCSS-SEECSCCCSSSCEEEC
T ss_pred hCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCH-----------HHHHHHHHhcCc-ceEeecCCCCceeeec
Confidence 234445566666543 244677777431 023457776654 588888875
Q ss_pred -----CC----------C-CCCeEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 314 -----AF----------G-DDTCIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 314 -----~~----------~-~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
.+ + .++++|++++. |+++++++.|+++++++
T Consensus 416 p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~--edi~~li~~L~~al~~~ 462 (464)
T 1ibj_A 416 PCFMSHASIPAEVREARGLTEDLVRISAGI--EDVDDLISDLDIAFKTF 462 (464)
T ss_dssp TTTTTTCSCCSSSSSSSSCCTTCEEEECCS--SCHHHHHHHHHHHHHSC
T ss_pred ccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHhhc
Confidence 11 1 15789999998 89999999999998754
No 143
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.97 E-value=7.1e-30 Score=236.44 Aligned_cols=316 Identities=13% Similarity=0.079 Sum_probs=212.5
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-CcEEEeCChHHHHHHHHHHh--cCCCCEEEecCCCCCChHHHHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-DQILVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-~~i~~~~g~~~a~~~~~~~l--~~~~~~vl~~~~~~~~~~~~~~ 78 (352)
+|+...+..+++ +.+++.+. ..+. .. +++++++|+++++..+++++ ..++++|++.++.|++......
T Consensus 77 ~~~~~~~~~~~~------~~l~~~la~~~~~--~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~ 148 (439)
T 3dxv_A 77 GATILSASNAPA------VTLAERLLASFPG--EGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSM 148 (439)
T ss_dssp CSCSSSSEEHHH------HHHHHHHHHTTTC--TTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH
T ss_pred CccccccCCHHH------HHHHHHHHHhCCC--CCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHH
Confidence 344445556666 77777777 3332 34 79999999999999999885 2356789998998877665444
Q ss_pred hc-CCe--------------EEEecccCCCCccc-----CHHHHHhhc----cCCeeEEEEcCCCCCcccCC-CHHHHHH
Q 018665 79 IA-DAT--------------PVILPTRISENFLL-----DPKVLESKL----TEKSRLLILCSPSNPTGSVY-PKNLLDE 133 (352)
Q Consensus 79 ~~-g~~--------------v~~i~~~~~~~~~~-----d~~~l~~~l----~~~~~~i~i~~p~nptG~~~-~~~~l~~ 133 (352)
.. +.. +..++.+ ..+.. |++.|++++ .++++++++++++|++|... +.+++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~ 226 (439)
T 3dxv_A 149 AFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRK 226 (439)
T ss_dssp CC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHH
T ss_pred hhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHH
Confidence 33 221 1233332 11112 689999988 45778888888888888765 4556999
Q ss_pred HHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccc
Q 018665 134 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 213 (352)
Q Consensus 134 l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~ 213 (352)
|.++|++| |+++|+||+|+++.+.+.. ........ ..+ +.|+||.+| +|+|+||+++++++++.+.......+
T Consensus 227 l~~l~~~~-~~~li~DE~~~g~g~~g~~-~~~~~~~~-~~d---i~s~sK~~~-~G~riG~~~~~~~~~~~~~~~~~~~t 299 (439)
T 3dxv_A 227 FADICRAH-GILVVCDEVKVGLARSGRL-HCFEHEGF-VPD---ILVLGKGLG-GGLPLSAVIAPAEILDCASAFAMQTL 299 (439)
T ss_dssp HHHHHHHT-TCEEEEECTTTCTTTTSSS-SGGGGTTC-CCS---EEEECGGGG-TTSCCEEEEEEHHHHTSCSSSSCCTT
T ss_pred HHHHHHHc-CCEEEEeccccCCCcCchh-hHHHhcCC-CCC---EEEEcchhc-CCcceEEEEECHHHHhhhcCCCcCCC
Confidence 99999999 9999999999987655531 11111111 122 338999999 79999999999999888766544566
Q ss_pred cCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhc----ccCCceecCCCCceEEEeecCCccCCcccCCC
Q 018665 214 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 289 (352)
Q Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 289 (352)
+ .+++.+.++.++++.. +. +++.++++++.+++.+.|+ .++.+....+. |.++++++.........
T Consensus 300 ~-~~~~~~~aa~aal~~~----~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~--- 369 (439)
T 3dxv_A 300 H-GNPISAAAGLAVLETI----DR-DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGR-GLACGMELVCDRQSREP--- 369 (439)
T ss_dssp T-TCHHHHHHHHHHHHHH----HH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEEEETTTTEE---
T ss_pred c-ccHHHHHHHHHHHHHH----Hh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCC---
Confidence 6 8999999988888741 11 3334444555555555444 34445554444 55566665211000000
Q ss_pred CCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 290 KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 290 ~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
......++.+.|+++ ||.+.|+..+ ++++|++++. +++++++++++|+++++++.+
T Consensus 370 ~~~~~~~~~~~l~~~-Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 427 (439)
T 3dxv_A 370 ARAETAKLIYRAYQL-GLVVYYVGMN--GNVLEFTPPLTITETDIHKALDLLDRAFSELSA 427 (439)
T ss_dssp CHHHHHHHHHHHHHH-TEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred CHHHHHHHHHHHHHC-CcEEeecCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 001467788888877 9999997532 5899998765 899999999999999988754
No 144
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=1.3e-29 Score=228.42 Aligned_cols=298 Identities=13% Similarity=0.072 Sum_probs=212.0
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCE--EEecCCCCCChH---HHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDE--VIIPAPFWVSYP---EMA 77 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~--vl~~~~~~~~~~---~~~ 77 (352)
.|+++++..+++ +.++++++ .+..++++|+++++..++.++.+++|+ |+++.+.|.... ...
T Consensus 43 ~~~~~~~~~~l~------~~la~~~~-------~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~ 109 (359)
T 3pj0_A 43 IYGNGAVIEDFE------TKIAKILG-------KQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLK 109 (359)
T ss_dssp BTTBSHHHHHHH------HHHHHHHT-------CSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHH
T ss_pred cccCCHHHHHHH------HHHHHHhC-------CCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHH
Confidence 467777888999 99999986 233355688899999999998887776 555555443222 223
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
...|.+++.++.+ ++.+|+++|+++ .+++++|++++|+||+ |.++|.+++++|+++|+++ |+++|+|+++..+.
T Consensus 110 ~~~g~~~~~v~~~---~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~-~~~li~D~a~~~~~ 184 (359)
T 3pj0_A 110 ELQQITPLLLGTA---NQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQ-GISLHLDGARLWEI 184 (359)
T ss_dssp HHHCCEEEECSCT---TSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHH-TCEEEEEETTCGGG
T ss_pred HhcCceEEecCCc---CCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHc-CCEEEEECcchhcc
Confidence 5679999998863 456899999998 7789999999999987 7999999999999999999 99999999976432
Q ss_pred c--CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCC--ChHHHHHHHHHhcccC
Q 018665 157 Y--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGY 232 (352)
Q Consensus 157 ~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~ 232 (352)
. .+.....+. . ...+++.|+||.++.+ .+ |+++.++++++.+......+..+. ......++..+++.
T Consensus 185 ~~~~~~~~~~~~---~--~~d~~~~s~sK~~~~~-~g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-- 255 (359)
T 3pj0_A 185 TPFYQKSAEEIC---A--LFDSVYVSFYKGIGGI-AG-AILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEK-- 255 (359)
T ss_dssp HHHHTCCHHHHH---T--TCSEEEEESSSTTCCS-SC-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--
T ss_pred hhhhCCCHHHhh---c--cCCEEEEeccccCCCc-ce-EEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH--
Confidence 1 121111111 1 2235667999998634 33 888899999998876544333222 22233333344432
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcccCCceec-CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc
Q 018665 233 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 311 (352)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~ 311 (352)
.. +..++++++++++.+.|++++|+.+. .+..++++|++++.... .+..++.+.|.++ ||.+.|
T Consensus 256 ----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~l~~~-GV~v~~ 320 (359)
T 3pj0_A 256 ----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSAD---------EIGAILTKIQDET-GVGISG 320 (359)
T ss_dssp ----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHH---------HHHHHHHHHHHHH-CEECCS
T ss_pred ----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccc---------hhHHHHHHHHHhc-CcEecC
Confidence 22 33445677888999999998899885 56677778887764210 0356788888765 999999
Q ss_pred CCCCCCC--CeEEEEeec-----CHHHHHHHHHHHHHH
Q 018665 312 GDAFGDD--TCIRISYAA-----SLTTLQAAVERIKKG 342 (352)
Q Consensus 312 g~~~~~~--~~iRi~~~~-----~~~~l~~~~~~l~~~ 342 (352)
|..+..+ +++|+++.. +.+++++++++|+++
T Consensus 321 g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 321 YLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp CCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred CccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 9766533 589998862 789999999999875
No 145
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.97 E-value=1.8e-28 Score=226.00 Aligned_cols=298 Identities=13% Similarity=0.140 Sum_probs=219.0
Q ss_pred ccCC-CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRV-SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~-~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
+|++ ..+..++| +.++++++ .+++++++|+++++..++.++. +||+|+++.|+|.++...++..|
T Consensus 46 ~y~~~~~~~~~l~------~~la~~~~-------~~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G 111 (424)
T 2po3_A 46 WLSNGGPLVREFE------ERVAGLAG-------VRHAVATCNATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIG 111 (424)
T ss_dssp CCSSSCHHHHHHH------HHHHHHHT-------SSEEEEESCHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTT
T ss_pred CcccCCHHHHHHH------HHHHHHhC-------CCeEEEeCCHHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcC
Confidence 3655 57778888 99999985 3699999999999999999985 67999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~ 160 (352)
.+++.+++++ .++.+|+++|++.+++++++|++++ |+|...+ +++|.++|+++ |+++|+|++|+ ++.+++.
T Consensus 112 ~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~---l~~i~~la~~~-~~~li~Dea~~~g~~~~~~ 183 (424)
T 2po3_A 112 LTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCA---ADQLRKVADEH-GLRLYFDAAHALGCAVDGR 183 (424)
T ss_dssp CEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCC---HHHHHHHHHHT-TCEEEEECTTCTTCEETTE
T ss_pred CEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCC---HHHHHHHHHHc-CCEEEEECccccCCeECCe
Confidence 9999999874 3567899999999988899888753 8999888 99999999999 99999999999 4555432
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhcccc---C-----CC-hHHHHHHHHHhcc
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTS---G-----AS-SISQKAGVAALGL 230 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~~---~-----~~-~~~~~~~~~~l~~ 230 (352)
++... .+ +++.|+||..+++|.|+||++++ +++++.+......... . .+ .+.+.++..++..
T Consensus 184 ---~~~~~----~d-i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~ 255 (424)
T 2po3_A 184 ---PAGSL----GD-AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS 255 (424)
T ss_dssp ---ETTSS----SS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH
T ss_pred ---ecccc----cC-EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH
Confidence 22211 12 88999994444456799999998 7888887765332110 0 00 1122223333322
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC-CCCc----eEEEeecCC---ccCCcccCCCCCCChHHHHHHHH
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGA----FYLFIDFST---YYGSEAEGFGKIENSESLCRYLL 302 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~g----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~ 302 (352)
.+.+++..++.+++++++.+.|++++++.+.. +.++ +++++.+++ .. +..++.+.|.
T Consensus 256 ----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~~~~l~~~L~ 320 (424)
T 2po3_A 256 ----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGI-----------HRDLVMEVLK 320 (424)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSS-----------CHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchh-----------hHHHHHHHHH
Confidence 34566777788888889999999888888875 3332 334466653 11 6788888887
Q ss_pred HccCEEeccCCCCC--------------CCCe-------EEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 303 DKAQVALVPGDAFG--------------DDTC-------IRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 303 ~~~gi~i~~g~~~~--------------~~~~-------iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
++ ||.+.+..... .+++ +|+++.. +++|++++++.|+++++..
T Consensus 321 ~~-gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 321 AE-GVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp HT-TEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HC-CCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 65 99997732100 0122 6666444 8999999999999887654
No 146
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.97 E-value=6.5e-29 Score=229.66 Aligned_cols=284 Identities=14% Similarity=0.124 Sum_probs=210.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc---------CCC-CEEEecCCCCCChH-HHHHhcC--------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC---------SPG-DEVIIPAPFWVSYP-EMARIAD-------- 81 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---------~~~-~~vl~~~~~~~~~~-~~~~~~g-------- 81 (352)
+.+++++ ..+++++++|+++|++.+++.+. .+| ++|++.+|+|++.. ..+...|
T Consensus 125 ~~la~~~-------g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~ 197 (439)
T 2oat_A 125 EYITKLF-------NYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGF 197 (439)
T ss_dssp HHHHHHH-------TCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTS
T ss_pred HHHHHhc-------CCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCC
Confidence 6666665 25799999999999999998864 245 89999999998765 3444444
Q ss_pred ----CeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 82 ----ATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 82 ----~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
.++..++. .|+++|+++++ +++++++++..++++|. .+|.+++++|.++|+++ |+++|+||+|.++
T Consensus 198 ~p~~~~v~~~~~-------~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~g~ 269 (439)
T 2oat_A 198 GPFMPGFDIIPY-------NDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRH-QVLFIADEIQTGL 269 (439)
T ss_dssp CSCCTTEEEECS-------SCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTT
T ss_pred CCCCCCeEEeCC-------CCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCC
Confidence 35555553 28999999994 67777776655778896 46888999999999999 9999999999887
Q ss_pred ccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCC
Q 018665 156 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
.++|.. ..+..... ..+ +.|+||.+| +| +|+|++++++++++.+.......+++.|++.+.++.++++.
T Consensus 270 g~~g~~-~~~~~~~~-~~D---i~t~sK~l~-~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~---- 339 (439)
T 2oat_A 270 ARTGRW-LAVDYENV-RPD---IVLLGKALS-GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEV---- 339 (439)
T ss_dssp TTTSSS-SGGGGGTC-CCS---EEEECGGGG-TTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHH----
T ss_pred ccCCcc-hhHHHhCC-CCc---EEEeccccc-CCCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHH----
Confidence 665532 11111111 122 338999998 78 89999999999887776544456678899999988888875
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccCCceec--CCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccC
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 312 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g 312 (352)
.+. +++.++++++.+++.+.|+++ ++.+. .+..|.++++++++..+ .+..++.+.|.++ ||.+.|+
T Consensus 340 ~~~-~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~~---------~~~~~l~~~l~~~-Gv~v~~~ 407 (439)
T 2oat_A 340 LEE-ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETKD---------WDAWKVCLRLRDN-GLLAKPT 407 (439)
T ss_dssp HHH-TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCSS---------CCHHHHHHHHHHT-TEECCBS
T ss_pred Hhh-hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCcc---------HHHHHHHHHHHHC-CeEEecC
Confidence 111 356677888899999999886 43321 22346667888865210 1577899999876 9999885
Q ss_pred CCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 313 DAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 313 ~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
.++++|++++. +++++++++++|++++++
T Consensus 408 ----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 408 ----HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ----SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 36899998875 999999999999999875
No 147
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.97 E-value=8.8e-30 Score=233.41 Aligned_cols=290 Identities=11% Similarity=0.084 Sum_probs=215.7
Q ss_pred HHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccC-CCCccc
Q 018665 22 QFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRI-SENFLL 97 (352)
Q Consensus 22 ~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~-~~~~~~ 97 (352)
.++++++ .++++|++++| ++++..++.++.++||+|+++.|+|.++. ..++..|..+..++++. ..++.+
T Consensus 77 ~la~~~g-----~~~~~i~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 150 (407)
T 2dkj_A 77 RAKALFG-----AAWANVQPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELI 150 (407)
T ss_dssp HHHHHHT-----CSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSC
T ss_pred HHHHHhC-----CCcceEEecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCcc
Confidence 5666664 44445555555 56999999999999999999999998883 44555565333444321 235678
Q ss_pred CHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc-cccCCCCccccccCCCCCCce
Q 018665 98 DPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 98 d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~-~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|+++|++++++ +++++++++|+|| ...+ +++|.++|+++ |+++|+||+|+. +.+.+.....+ . ..+
T Consensus 151 d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~~~~----~--~~d 218 (407)
T 2dkj_A 151 DLEEVRRLALEHRPKVIVAGASAYP--RFWD---FKAFREIADEV-GAYLVVDMAHFAGLVAAGLHPNPL----P--YAH 218 (407)
T ss_dssp CHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTCSCCCT----T--TCS
T ss_pred CHHHHHHHHhhcCCeEEEEeccccC--CCCC---HHHHHHHHHHc-CCEEEEEccccccccccCccCCcc----c--ccc
Confidence 99999999974 8899999899997 6677 89999999999 999999999987 44444321111 1 246
Q ss_pred EEEeccccccccccceeEEEEcC-hhHHHHHHhhhhccc-cCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT-SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
+++.|+||.+ +|.++|+++++ +++++.+......+. .+++.....++.++++.. ...+++++.++++++++++.
T Consensus 219 i~~~s~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~ 294 (407)
T 2dkj_A 219 VVTSTTHKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEA--LQPEFKEYSRLVVENAKRLA 294 (407)
T ss_dssp EEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHH
Confidence 8899999966 56788999999 799888877654443 334554454666666541 13567888999999999999
Q ss_pred HHhcccCCceecC-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC------CCCCeEEEEee
Q 018665 254 KSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF------GDDTCIRISYA 326 (352)
Q Consensus 254 ~~l~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~------~~~~~iRi~~~ 326 (352)
+.|+++ |+.+.. +..++++++.++... .+..++.+.|.+ .||.+.+|..+ ..++++|++++
T Consensus 295 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~~~~iRis~~ 362 (407)
T 2dkj_A 295 EELARR-GYRIVTGGTDNHLFLVDLRPKG----------LTGKEAEERLDA-VGITVNKNAIPFDPKPPRVTSGIRIGTP 362 (407)
T ss_dssp HHHHHT-TCEEGGGSCSSSEEEEECGGGT----------CCHHHHHHHHHH-TTEECEECCCTTCSSCTTTCSEEEEECH
T ss_pred HHHHhC-CceeecCCCCceEEEEECcccC----------CCHHHHHHHHHH-cCceecCCcCccccccccCCCceeeecc
Confidence 999988 888875 356778888887421 167788888865 59999998643 23578999996
Q ss_pred ------cCHHHHHHHHHHHHHHHhh
Q 018665 327 ------ASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 327 ------~~~~~l~~~~~~l~~~~~~ 345 (352)
.+++++++++++|++++++
T Consensus 363 ~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 363 AITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp HHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHHHHHHHhc
Confidence 5889999999999999887
No 148
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=6.1e-29 Score=226.31 Aligned_cols=282 Identities=14% Similarity=0.150 Sum_probs=204.3
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~ 82 (352)
+++..+++ +.++++++ ..+.|+++ ++++++..++.++.++||+|+++.|+|.+.... ++..|.
T Consensus 51 ~~~~~~l~------~~la~~~~------~~~~i~~~-sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 117 (386)
T 1cs1_A 51 NPTRDVVQ------RALAELEG------GAGAVLTN-TGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_dssp CHHHHHHH------HHHHHHHT------CSEEEEES-SHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSC
T ss_pred CccHHHHH------HHHHHHhC------CCcEEEeC-CHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCC
Confidence 44556778 99999986 23566664 559999999999999999999999999875543 467899
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++.+ |++++++.+++++++|++++|+||||.+++ +++|.++|+++ |+++|+||+|+.+.+.
T Consensus 118 ~~~~~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~---- 182 (386)
T 1cs1_A 118 RVLFVDQG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREV-GAVSVVDNTFLSPALQ---- 182 (386)
T ss_dssp EEEEECTT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTCTTTC----
T ss_pred EEEEeCCC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCcccccC----
Confidence 99988753 889999999889999999999999999999 99999999999 9999999999876432
Q ss_pred cccccCCCCCCceEEEecccccccccccee-EEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
.++ ..+.++++.|++|.++.+|.++ |++++++ ++++.+......++.+.+++.+.++.+.++. +..
T Consensus 183 ~~~-----~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~ 250 (386)
T 1cs1_A 183 NPL-----ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LVP 250 (386)
T ss_dssp CGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-------HHH
T ss_pred Ccc-----ccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-------HHH
Confidence 111 1356699999999998788776 9999886 7888887766555566788877776666542 344
Q ss_pred HHHHHHHHHHHHHHHhcccCCceec-C----------------CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 241 MVKAFRERRDFLVKSFGELEGVKMS-E----------------PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~g~~~~-~----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
..+...++.+.+.+.|++++.+... . ...+.++.+.+++ ..+++.+.|.+
T Consensus 251 ~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~ 317 (386)
T 1cs1_A 251 RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------------DEQTLRRFLGG 317 (386)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------------CHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------------CHHHHHHHHHh
Confidence 4555666777777777765443221 1 1124445556643 34566666654
Q ss_pred ccCEEeccCCC---------------C----------C-CCCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 304 KAQVALVPGDA---------------F----------G-DDTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 304 ~~gi~i~~g~~---------------~----------~-~~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
.||.+.+.+. + + .++++|++++. ++++++++.+.|+++
T Consensus 318 -~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 318 -LSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp -CSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred -CCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 5888764210 0 1 25799999998 445555555555443
No 149
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.97 E-value=2.4e-29 Score=224.20 Aligned_cols=279 Identities=13% Similarity=0.114 Sum_probs=200.5
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCCCC
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISEN 94 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~~~ 94 (352)
+++.+|++++ . + +.++++++++++..++.++.++||+|+++.|+|.++...+ +..|.+++.++.
T Consensus 3 l~~~la~~~g-----~-~-~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----- 70 (331)
T 1pff_A 3 LEGKIAKLEH-----A-E-ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM----- 70 (331)
T ss_dssp HHHHHHHHHT-----C-S-EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----
T ss_pred HHHHHHHHhC-----C-C-eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----
Confidence 3499999996 3 3 4555555689999999999999999999999999987665 458999999875
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh-CCCEEEEecccccccccCCCCccccccCCCCCC
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
.|++++++.+++++++|++++|+||||.++| +++|.++|++ + |+++|+|++|+.+.+. .++ ..+
T Consensus 71 --~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~-~~~li~D~a~~~~~~~----~~~-----~~~ 135 (331)
T 1pff_A 71 --AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQK-DILVIVDNTFASPILT----NPL-----DLG 135 (331)
T ss_dssp --TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSS-SCEEEEECTTTHHHHC----CGG-----GGT
T ss_pred --CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhc-CCEEEEECCCcccccC----Chh-----hcC
Confidence 3788999999889999999999999999999 9999999999 9 9999999999865432 111 135
Q ss_pred ceEEEeccccccccccce-eEEEEcCh-hHHHHHHhhhhc-cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWR-LGYIAGPK-HFVAACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 250 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~-~g~l~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
+++++.|+||.+|.+|.| .|++++++ ++++.+...... ++.+.+++.+.++...++. .....+...+......+
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~ 212 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT---LDMRVKRAAENAQKVAE 212 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch---HHHHHHHHHHHHHHHHH
Confidence 679999999999878888 79999998 898888876655 5567788777776666643 12222233333333333
Q ss_pred HHHHH----------hcccCCceecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC---
Q 018665 251 FLVKS----------FGELEGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA--- 314 (352)
Q Consensus 251 ~l~~~----------l~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~--- 314 (352)
.+.+. |.++|++.+..+ ..+.++.+.++ +..++.+.|.+ .||.+.+.+.
T Consensus 213 ~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~-~gI~~~~~s~g~~ 277 (331)
T 1pff_A 213 FLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------------GLEKAKKVLDN-CHVVSLAVSLGGP 277 (331)
T ss_dssp HHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------------SHHHHHHHHHT-CSSSEECSSCCSS
T ss_pred HHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------------CHHHHHHHHHh-CCCceeccCCCCc
Confidence 33321 222234444321 13444566654 35566666654 5887655421
Q ss_pred ----------------------CC-CCCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 315 ----------------------FG-DDTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 315 ----------------------~~-~~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
++ .++++|+|++. ++++++++++.|+++
T Consensus 278 ~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 278 ESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp SCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred ceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 11 15799999998 678888888888754
No 150
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.97 E-value=9.8e-29 Score=229.93 Aligned_cols=320 Identities=12% Similarity=0.029 Sum_probs=216.3
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChH
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYP 74 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~ 74 (352)
|....+..+.+ +.+++++. ..+ ...++|++++|+++|+..+++.+.+ ++++|++.+|+|+++.
T Consensus 86 ~~~~~~~~~~~------~~la~~l~~~~~--~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~ 157 (459)
T 4a6r_A 86 NTFFKTTHPAV------VELSSLLAEVTP--AGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGST 157 (459)
T ss_dssp CTTSSSCCHHH------HHHHHHHHHHSC--TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSS
T ss_pred ccccccCCHHH------HHHHHHHHHhCC--CCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCcc
Confidence 33334555666 77777776 443 4567999999999999999998864 5689999999999877
Q ss_pred HHHHhcCC-------------eEEEecccC--C-CCcccC--------HHHHHhhcc----CCeeEEEEcCCCCCccc-C
Q 018665 75 EMARIADA-------------TPVILPTRI--S-ENFLLD--------PKVLESKLT----EKSRLLILCSPSNPTGS-V 125 (352)
Q Consensus 75 ~~~~~~g~-------------~v~~i~~~~--~-~~~~~d--------~~~l~~~l~----~~~~~i~i~~p~nptG~-~ 125 (352)
......+. .+..++.+. . .++ .| +++|++.++ +++++++++.+++++|. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~ 236 (459)
T 4a6r_A 158 IGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIV 236 (459)
T ss_dssp HHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBC
T ss_pred HHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCccc
Confidence 55543321 334444331 0 111 23 788888885 34556665555666666 4
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHH
Q 018665 126 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 205 (352)
Q Consensus 126 ~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~ 205 (352)
+|.+++++|.++|++| |+++|+||+|.++.+.|... ....... .++ +.++||.++.+|+|+|++++++++++.+
T Consensus 237 ~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~G~~~-~~~~~~~-~pd---i~t~sK~l~gg~~~lg~v~~~~~i~~~~ 310 (459)
T 4a6r_A 237 PPATYWPEIERICRKY-DVLLVADEVICGFGRTGEWF-GHQHFGF-QPD---LFTAAKGLSSGYLPIGAVFVGKRVAEGL 310 (459)
T ss_dssp CCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSS-HHHHHTC-CCS---EEEECGGGGTTSSCCEEEEECHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCEEEEeccccCCCcccccc-hHhhcCC-CCC---eeehhhhhcCCCCCccceeeCHHHHHHh
Confidence 5888999999999999 99999999999887666421 1111111 112 4468899984448999999999999988
Q ss_pred H---hhhhccccCCChHHHHHHHHHhcccCCChHHHHHHH-HHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCcc
Q 018665 206 N---KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV-KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 281 (352)
Q Consensus 206 ~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~ 281 (352)
. ......+++.|++.++++.++++.... ++..++.. +..+..++.+.+.|++++.+..+.+.+. ++++++....
T Consensus 311 ~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~-~~~~~~~~~~ 388 (459)
T 4a6r_A 311 IAGGDFNHGFTYSGHPVCAAVAHANVAALRD-EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGM-VQAFTLVKNK 388 (459)
T ss_dssp HHHCTTHHHHHHCSCHHHHHHHHHHHHHHHH-TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETT-EEEEEECSBT
T ss_pred hcCCCcccCCCCCCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEE-EEEEEEecCc
Confidence 7 334445678999999999999974211 23444555 4455555555566666666666655544 5666665321
Q ss_pred CCcccCCCC-CCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 282 GSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
.... .+.. .....++.+.|+++ ||.+.|++ +++||+++. +++++++++++|+++++++.
T Consensus 389 ~~~~-~~~~~~~~~~~~~~~l~~~-Gv~v~~~g-----~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 389 AKRE-LFPDFGEIGTLCRDIFFRN-NLIMRACG-----DHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp TTTB-CCSSTTHHHHHHHHHHHHT-TEECEEET-----TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cccchHHHHHHHHHHHHHC-CeEEecCC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1000 0000 00156788888876 99999863 899999765 99999999999999987653
No 151
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=6.6e-29 Score=226.56 Aligned_cols=292 Identities=14% Similarity=0.176 Sum_probs=220.1
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|.+.++..+++ +.++++++ .+++++++|+++++..++.++ +++||+|+++.|+|.++...++..|.
T Consensus 35 ~~~~~~~~~l~------~~la~~~~-------~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~ 101 (393)
T 1mdo_A 35 ITTGPKNQELE------AAFCRLTG-------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLGA 101 (393)
T ss_dssp CSSSHHHHHHH------HHHHHHHC-------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTC
T ss_pred cCCChHHHHHH------HHHHHHhC-------CCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHHHHCCC
Confidence 44566777888 99999985 358999999999999999999 89999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc-cccCCCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPAT 161 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~-~~~~~~~ 161 (352)
+++.+++++ +++.+|+++|++++++++++|+++ ||+|.+.+ +++|.++|+++ |+++|+|++|+. ..+.+.
T Consensus 102 ~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~-~~~li~D~a~~~g~~~~~~- 172 (393)
T 1mdo_A 102 NPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD---LDAIYALGERY-GIPVIEDAAHATGTSYKGR- 172 (393)
T ss_dssp EEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHHHHHHHH-TCCBCEECTTCTTCEETTE-
T ss_pred EEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---HHHHHHHHHHc-CCeEEEECccccCCeECCe-
Confidence 999999874 346789999999998888888865 48999988 99999999999 999999999985 333221
Q ss_pred ccccccCCCCCCceEEEeccc--cccccccceeEEEEcC-hhHHHHHHhhhhccc------------------------c
Q 018665 162 HTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT------------------------S 214 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~------------------------~ 214 (352)
++ .. .++++.|+| |.++ |.+.|+++.+ +++++.+........ .
T Consensus 173 --~~---~~---~d~~~~S~~k~K~l~--~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 242 (393)
T 1mdo_A 173 --HI---GA---RGTAIFSFHAIKNIT--CAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKY 242 (393)
T ss_dssp --ET---TS---SSEEEEECCTTSSSC--SSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBC
T ss_pred --ec---CC---CCeEEEeCCCCCccc--cccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccC
Confidence 11 10 568999999 7764 4489999986 788888765432110 1
Q ss_pred CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC-C-----CCceEEEeecCC---ccCCcc
Q 018665 215 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-P-----QGAFYLFIDFST---YYGSEA 285 (352)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~-----~~g~~~~~~~~~---~~~~~~ 285 (352)
..+.+...++...+ +.+++..++.+++++++.+.|++++ +++.. + .+++++++.+++ ..
T Consensus 243 ~~~~~~~a~~~~~l-------~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---- 310 (393)
T 1mdo_A 243 NLPDLNAAIALAQL-------QKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCGI---- 310 (393)
T ss_dssp CCCHHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHSS----
T ss_pred CCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEeccccccc----
Confidence 12333333333333 2245666667778888999998874 66542 2 345568888873 21
Q ss_pred cCCCCCCChHHHHHHHHHccCEEeccCCCC--------------CC-------CCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 286 EGFGKIENSESLCRYLLDKAQVALVPGDAF--------------GD-------DTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 286 ~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~--------------~~-------~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
+..++.+.|.++ ||.+.++..+ .. ..++|+++.. +++|++++++.|+++
T Consensus 311 -------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 382 (393)
T 1mdo_A 311 -------TRDALMASLKTK-GIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI 382 (393)
T ss_dssp -------CHHHHHHHHHHT-TBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHhC-CCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 788899998875 9999887644 11 2379999985 999999999999999
Q ss_pred HhhhC
Q 018665 343 LLTLR 347 (352)
Q Consensus 343 ~~~~~ 347 (352)
++.+.
T Consensus 383 ~~~~~ 387 (393)
T 1mdo_A 383 AGQGS 387 (393)
T ss_dssp HC---
T ss_pred HhcCC
Confidence 87654
No 152
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.5e-29 Score=228.36 Aligned_cols=280 Identities=14% Similarity=0.169 Sum_probs=206.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh----cCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~----~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .+++++++|+++|+..++.+++++||+|+++.|+|.++...++. .|.+++.++.+
T Consensus 88 ~~la~~~g-------~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~------ 154 (414)
T 3ndn_A 88 ERLRLIEG-------APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD------ 154 (414)
T ss_dssp HHHHHHHT-------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT------
T ss_pred HHHHHHHC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC------
Confidence 77777764 46889999999999999999999999999999999998877654 99999999864
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
|+++|++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++|+..... .++ ..+.++
T Consensus 155 -d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~-g~~livDe~~~~~~~~----~~~-----~~g~di 220 (414)
T 3ndn_A 155 -DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAA-GAKVVLDNVFATPLLQ----QGF-----PLGVDV 220 (414)
T ss_dssp -CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHC----CCG-----GGTCSE
T ss_pred -CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-----hcCCCe
Confidence 899999999999999999999999999999 99999999999 9999999999743211 111 134569
Q ss_pred EEecccccccccc-ceeEEEEcChhHHH-HHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 177 TVNGFSKAFAMTG-WRLGYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 177 ~~~s~sK~~g~~g-~~~g~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
++.|+||.+|.+| +++|+++++++.+. .+.......+...++....++...++ .+....++..++++.+.+
T Consensus 221 v~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~-------~l~~r~~~~~~~a~~l~~ 293 (414)
T 3ndn_A 221 VVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE-------TLAIRVQHSNASAQRIAE 293 (414)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG-------GHHHHHHHHHHHHHHHHH
T ss_pred EeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 9999999998667 78999999998776 56655444555566666555444443 345556667778888888
Q ss_pred HhcccCCceec-CCC----------------CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-
Q 018665 255 SFGELEGVKMS-EPQ----------------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG- 316 (352)
Q Consensus 255 ~l~~~~g~~~~-~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~- 316 (352)
.|++.|++..+ .|. .|.++++.+++..... .+...++.+.|. ..++.+..|+.+.
T Consensus 294 ~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~------~~~~~~~~~~l~-~~~~~~s~G~~~sl 366 (414)
T 3ndn_A 294 FLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVA------KQRAFEVLDKMR-LIDISNNLGDAKSL 366 (414)
T ss_dssp HHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGH------HHHHHHHHHHCS-SSEECSCCSCSSCE
T ss_pred HHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcccc------HHHHHHHHHhCc-cceEcCCCCCCCce
Confidence 98887776433 221 4667888886420000 013556666655 3467777776432
Q ss_pred ----------------------CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 317 ----------------------DDTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 317 ----------------------~~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
.++++|||++. |+.+.+++.|++++
T Consensus 367 ~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 367 VTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp EECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred eeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 24689999998 34555555665554
No 153
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=2.2e-29 Score=231.43 Aligned_cols=279 Identities=10% Similarity=0.117 Sum_probs=210.8
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc------CCCCEE-EecCCCCCChHHHH----Hhc--CCeEEEe
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC------SPGDEV-IIPAPFWVSYPEMA----RIA--DATPVIL 87 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~------~~~~~v-l~~~~~~~~~~~~~----~~~--g~~v~~i 87 (352)
+.++++++ .++++|++++|+++++..++.++. ++||++ +++.+.|.++...+ +.. |.+++.+
T Consensus 78 ~~la~~~g-----~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 152 (416)
T 1qz9_A 78 NRLATLIG-----ARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLV 152 (416)
T ss_dssp HHHHTTTT-----CCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHcC-----CCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEe
Confidence 66666664 556899999999999998888876 788875 45556776555443 223 9999888
Q ss_pred cccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccccc
Q 018665 88 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 167 (352)
Q Consensus 88 ~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~ 167 (352)
+. +++|++++++++++|++++|+||||.+.| +++|.++|+++ |+++|+|++|+. +.....+..
T Consensus 153 ~~---------~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~----g~~~~~~~~ 215 (416)
T 1qz9_A 153 DS---------PEELPQAIDQDTAVVMLTHVNYKTGYMHD---MQALTALSHEC-GALAIWDLAHSA----GAVPVDLHQ 215 (416)
T ss_dssp SS---------GGGHHHHCSTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHH-TCEEEEECTTTT----TTSCCCHHH
T ss_pred Cc---------HHHHHHHhCCCceEEEEeccccCcccccC---HHHHHHHHHHc-CCEEEEEccccc----cCcCCChhh
Confidence 75 67888888889999999999999999999 89999999999 999999999974 222222222
Q ss_pred CCCCCCceEEEecccccccccccee-EEEEcChhHHHHHHhhh-----------------------hccccCCChHHHHH
Q 018665 168 LPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQ-----------------------SQFTSGASSISQKA 223 (352)
Q Consensus 168 ~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 223 (352)
.+.++++.|++|.++ +|.++ |++++++++++.+.... .....+++...+.+
T Consensus 216 ----~~~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 290 (416)
T 1qz9_A 216 ----AGADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAM 290 (416)
T ss_dssp ----HTCSEEEECSSSTTC-CCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHH
T ss_pred ----cCCCEEEecCcccCC-CCCCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHH
Confidence 134488999999985 67777 99999998876554321 11223567777777
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc-C--CceecCCC----CceEEEeecCCccCCcccCCCCCCChHH
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-E--GVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~--g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
+.++++.. ..++++++.++++++++++.+.|+++ + |+.+..+. .+.++++.++ +..+
T Consensus 291 ~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~ 354 (416)
T 1qz9_A 291 VECGLDVF--AQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP--------------EGYA 354 (416)
T ss_dssp HHHHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT--------------THHH
T ss_pred HHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC--------------CHHH
Confidence 77777641 12457788889999999999999885 6 88887653 3456788775 4668
Q ss_pred HHHHHHHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHHHhhhC
Q 018665 297 LCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 297 ~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.+.|.++ ||.+.. ..++++|++++. +++++++++++|++++++..
T Consensus 355 l~~~l~~~-gi~~~~----~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 355 VIQALIDR-GVIGDY----REPRIMRFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp HHHHHHTT-TEECEE----ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhC-CcEecc----CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 88888865 898753 246899999972 99999999999999998754
No 154
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=5.4e-29 Score=231.37 Aligned_cols=309 Identities=12% Similarity=0.074 Sum_probs=207.8
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc-----C---CCCEEEecCCCCCChHHHHHhcCC---------
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC-----S---PGDEVIIPAPFWVSYPEMARIADA--------- 82 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-----~---~~~~vl~~~~~~~~~~~~~~~~g~--------- 82 (352)
..+++++. ..+ ...+ |++++|+++|++.+++.+. . ++++|++.+|+|+++.......+.
T Consensus 94 ~~la~~l~~~~~--~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 170 (452)
T 3n5m_A 94 IKLAEKLNEWLG--GEYV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYE 170 (452)
T ss_dssp HHHHHHHHHHHT--SCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTC
T ss_pred HHHHHHHHHhCC--CCce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccC
Confidence 55555555 333 2334 9999999999999999876 4 678999999999987755544322
Q ss_pred ----eEEEecccCCCCcc-cC---------HHHHHhhcc----CCeeEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCC
Q 018665 83 ----TPVILPTRISENFL-LD---------PKVLESKLT----EKSRLLILCSP-SNPTGSVY-PKNLLDEIARIVAKHP 142 (352)
Q Consensus 83 ----~v~~i~~~~~~~~~-~d---------~~~l~~~l~----~~~~~i~i~~p-~nptG~~~-~~~~l~~l~~~~~~~~ 142 (352)
.+..++.+...... -| ++.|+++++ +++++++++.+ +| +|... +.+++++|.++|++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~- 248 (452)
T 3n5m_A 171 PFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKH- 248 (452)
T ss_dssp CCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHH-
T ss_pred CCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHc-
Confidence 23334432111100 01 889999887 56778888888 89 99766 788899999999999
Q ss_pred CEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHh------hhhccccC
Q 018665 143 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK------IQSQFTSG 215 (352)
Q Consensus 143 ~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~------~~~~~~~~ 215 (352)
|+++|+||+|.++.+.|.. ....... ....+.++||.++ +| +|+|++++++++++.+.. .....+++
T Consensus 249 ~~llI~DEv~~g~g~~g~~-~~~~~~~----~~~di~t~sK~l~-~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~ 322 (452)
T 3n5m_A 249 GALLISDEVICGFGRTGKA-FGFMNYD----VKPDIITMAKGIT-SAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFG 322 (452)
T ss_dssp TCEEEEECTTTTTTTTSSS-SGGGGTT----CCCSEEEECGGGG-TTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSST
T ss_pred CCEEEEecchhCCCccccc-chhhhcC----CCCCEEeeccccc-CCCcceEEEEECHHHHHHHhhccCCCCccccCCCC
Confidence 9999999999988766642 1222111 1122457899998 59 999999999999888743 12345677
Q ss_pred CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChH
Q 018665 216 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 295 (352)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (352)
.|+++++++.++++.... ++..+++.+..+..++.+.+.+++++.+..+.+.+. ++++.+........ .+. .....
T Consensus 323 ~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~-~~~-~~~~~ 398 (452)
T 3n5m_A 323 GNPAACALALKNLEIIEN-ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGL-LVGIELVNDKETKE-PID-NDKIA 398 (452)
T ss_dssp TCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSS-CEEEEEEEETTTTE-ECC-HHHHH
T ss_pred CCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEE-EEEEEEecCCcccC-CCC-HHHHH
Confidence 899999999999874211 233444444444455555555555555655554444 45566532110000 000 00135
Q ss_pred HHHHHHHHccCEEeccCCCCC--CCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 296 SLCRYLLDKAQVALVPGDAFG--DDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 296 ~~~~~l~~~~gi~i~~g~~~~--~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
++.+.|+++ ||.+.|+..+. .++++||+++. +++++++++++|++++++
T Consensus 399 ~~~~~l~~~-Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 399 SVVNACKEK-GLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHT-TEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHC-CcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 688888876 99999987543 25799998765 999999999999999875
No 155
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.97 E-value=1.2e-29 Score=236.60 Aligned_cols=287 Identities=11% Similarity=0.036 Sum_probs=217.4
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC---EEEecCCCCCChHH----HHHhcCCeEE-----Eec
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD---EVIIPAPFWVSYPE----MARIADATPV-----ILP 88 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~---~vl~~~~~~~~~~~----~~~~~g~~v~-----~i~ 88 (352)
+.++++++ .++++|++++|++++++.++.++.++++ +|+++.|+|++... .++..|.++. ..+
T Consensus 118 ~~la~~~g-----~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~ 192 (465)
T 3e9k_A 118 GLMKDIVG-----ANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP 192 (465)
T ss_dssp GGGHHHHT-----CCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred HHHHHHcC-----CCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence 78888876 6678999999999999999999976554 59999999988554 6667898753 233
Q ss_pred ccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 89 TRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 89 ~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.+ +++.+|+++++++++ +++++|++++|+||||.+.| +++|.++|+++ |+++|+|++|+. +..+..+
T Consensus 193 ~~--~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~-g~~vi~D~a~~~----g~~~~~~ 262 (465)
T 3e9k_A 193 RE--GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN---IPAITKAGQAK-GCYVGFDLAHAV----GNVELYL 262 (465)
T ss_dssp CT--TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHT-TCEEEEECTTTT----TTSCCCH
T ss_pred CC--CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---HHHHHHHHHHc-CCEEEEEhhhhc----CCcCCch
Confidence 33 456689999999996 68899999999999999999 89999999999 999999999875 2222222
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh-------------------------hccccCCChHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------------------SQFTSGASSIS 220 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~ 220 (352)
.. .+.+++++|++|.++.+..++|++++++++++.+.... .....+++...
T Consensus 263 ~~----~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 338 (465)
T 3e9k_A 263 HD----WGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILL 338 (465)
T ss_dssp HH----HTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHH
T ss_pred hh----cCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHH
Confidence 22 23458999999999313336899999888766543110 01112577777
Q ss_pred HHHHHHHhcccCCChH-HHHHHHHHHHHHHHHHHHHhccc----------CCceecCCC----CceEEEeecCCccCCcc
Q 018665 221 QKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGEL----------EGVKMSEPQ----GAFYLFIDFSTYYGSEA 285 (352)
Q Consensus 221 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~----------~g~~~~~~~----~g~~~~~~~~~~~~~~~ 285 (352)
..++.++++. ..+ .+++++++.+++++++.+.|+++ +|++++.+. .|.++++.++.
T Consensus 339 ~~a~~aal~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~------ 409 (465)
T 3e9k_A 339 VCSLHASLEI---FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV------ 409 (465)
T ss_dssp HHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC------
T ss_pred HHHHHHHHHH---HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC------
Confidence 7777777765 122 37888899999999999999875 688888765 25667777762
Q ss_pred cCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEe-ec--CHHHHHHHHHHHHHHHhhhC
Q 018665 286 EGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 286 ~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~-~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+..++.+.|.++ ||.+.. ..++++|+++ +. +++|++++++.|++++++..
T Consensus 410 -------~~~~l~~~L~~~-Gi~v~~----~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 410 -------PNKDVFQELEKR-GVVCDK----RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp -------TTCCHHHHHHTT-TEECEE----ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred -------CHHHHHHHHHHC-CEEEec----CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 566788888866 998863 3478999998 44 89999999999999997653
No 156
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.97 E-value=2.3e-29 Score=233.53 Aligned_cols=293 Identities=13% Similarity=0.031 Sum_probs=211.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CEEEecCCCCCChHHHHHhc------------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA------------ 80 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~-------~~-~~vl~~~~~~~~~~~~~~~~------------ 80 (352)
+.+++++ + ...++|++++|+++|++.+++.+.. ++ +.|++.++.|++........
T Consensus 125 e~la~~~---~--~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 199 (457)
T 3tfu_A 125 KLLVDIT---P--AGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWT 199 (457)
T ss_dssp HHHHHHS---S--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC--------
T ss_pred HHHHHhC---C--CCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCccccccccc
Confidence 5555554 2 3557999999999999999988753 34 58999999998866544433
Q ss_pred --CCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcC-CCCCcccCC-CHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 81 --DATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCS-PSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 81 --g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~-p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
...+..++.+.......|++.|+++++ +++++|+++. ++|++|... +.+++++|.++|+++ |+++|+||++.
T Consensus 200 ~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~ 278 (457)
T 3tfu_A 200 DVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRY-EVLLIFDEIAT 278 (457)
T ss_dssp --CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHH-TCEEEEECTTT
T ss_pred CCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEcCcc
Confidence 123444454432222248899999887 6788888888 899999776 677899999999999 99999999999
Q ss_pred ccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh-----hhccccCCChHHHHHHHHH
Q 018665 154 HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAA 227 (352)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 227 (352)
++.++|.. ..+..... .++ +.|+||.++ +| +|+|++++++++++.+... ....+++.|++.++++.++
T Consensus 279 g~gr~G~~-~a~~~~~~-~pd---iit~sK~l~-gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aa 352 (457)
T 3tfu_A 279 GFGRTGAL-FAADHAGV-SPD---IMCVGKALT-GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVAS 352 (457)
T ss_dssp TTTTTSSS-STHHHHTC-CCS---EEEECGGGG-TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHH
T ss_pred CCccccch-hHhHhcCC-Cce---EEEEChhhh-CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHH
Confidence 88766542 12121111 122 338999997 56 6999999999999988521 3345678899999999998
Q ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 228 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
++.... +++.++++++.+++.+.|+++ +++..+.+. |.++++++++.. +..++.+.|+++
T Consensus 353 L~~~~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~-G~~~~i~l~~~~-----------~~~~~~~~l~~~ 415 (457)
T 3tfu_A 353 VELLLG-----QDWRTRITELAAGLTAGLDTARALPAVTDVRVC-GAIGVIECDRPV-----------DLAVATPAALDR 415 (457)
T ss_dssp HHHHHT-----SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEEC-SSCEEEEESSCC-----------CHHHHHHHHHHT
T ss_pred HHHHhh-----hHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecC-CeEEEEEECCcc-----------cHHHHHHHHHHC
Confidence 874111 234555666666777766654 455444434 556777876532 578899999977
Q ss_pred cCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 305 AQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 305 ~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
||.+.|. .+++|++++. +++++++++++|++++++++.
T Consensus 416 -Gv~v~~~-----~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~~ 455 (457)
T 3tfu_A 416 -GVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEVARLVGS 455 (457)
T ss_dssp -TEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred -CeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999874 4789999765 999999999999999988654
No 157
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.97 E-value=8.3e-29 Score=228.59 Aligned_cols=287 Identities=15% Similarity=0.124 Sum_probs=201.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc---------CCC-CEEEecCCCCCChHH-HHHhcC--------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC---------SPG-DEVIIPAPFWVSYPE-MARIAD-------- 81 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---------~~~-~~vl~~~~~~~~~~~-~~~~~g-------- 81 (352)
+.+++++ ..+++++++|+++|+..+++.+. .+| ++|++++|+|++... .+...|
T Consensus 114 ~~la~~~-------g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~ 186 (433)
T 1z7d_A 114 RYLTNLL-------GYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF 186 (433)
T ss_dssp HHHHHHH-------TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHhhc-------CCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccC
Confidence 6666655 25899999999999999998753 356 899999999987653 333333
Q ss_pred ----CeEEEecccCCCCcccCHHHHHhhc-cCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 82 ----ATPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 82 ----~~v~~i~~~~~~~~~~d~~~l~~~l-~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
..+..++. .|++.|++++ ++++++|+++..++++|.. +|.+.+++|.++|+++ |+++|+||+|.++
T Consensus 187 ~p~~~~v~~~~~-------~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~ 258 (433)
T 1z7d_A 187 GPFAPQFSKVPY-------DDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKY-NVLFVADEVQTGL 258 (433)
T ss_dssp -----CEEEECT-------TCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTT
T ss_pred CCCCCCeEEeCC-------CCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEecCccCC
Confidence 24444443 2899999999 5677777766667789975 6788999999999999 9999999999987
Q ss_pred ccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCC
Q 018665 156 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAG 234 (352)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (352)
.+.+.. ..+..... ..+ +.|+||.+| +| +|+|++++++++++.+.......+++.|++.++++.++++..
T Consensus 259 g~~g~~-~~~~~~~~-~~d---i~t~sK~l~-~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~--- 329 (433)
T 1z7d_A 259 GRTGKL-LCVHHYNV-KPD---VILLGKALS-GGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVL--- 329 (433)
T ss_dssp TTTSSS-SGGGGGTC-CCS---EEEECGGGG-TTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHH---
T ss_pred CcCCcc-hhhHhcCC-CCC---EEEECcccc-CCCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHH---
Confidence 665531 11111111 122 338999999 89 899999999998877655444566788999999888888741
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccc----CCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec
Q 018665 235 GEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 310 (352)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~ 310 (352)
.+ +++.++++++.+++.+.|+++ +.+.... ..|.++++++++.. .+..++.+.|.++ ||.+.
T Consensus 330 ~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~g~~~~i~~~~~~----------~~~~~~~~~l~~~-Gv~v~ 395 (433)
T 1z7d_A 330 IN--EKLCENAEKLGGPFLENLKRELKDSKIVRDVR-GKGLLCAIEFKNEL----------VNVLDICLKLKEN-GLITR 395 (433)
T ss_dssp HH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE-EETTEEEEEECTTT----------CCHHHHHHHHHHT-TEECC
T ss_pred Hh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-eeeeEEEEEEccCh----------hHHHHHHHHHHHC-CeEEe
Confidence 11 245566667777777777653 3222233 34566788876420 1577899999876 99998
Q ss_pred cCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 311 PGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 311 ~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
|+ .++++|++++. +++++++++++|+++++++..+
T Consensus 396 ~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 432 (433)
T 1z7d_A 396 DV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFFDER 432 (433)
T ss_dssp EE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred cC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 85 36799998875 9999999999999999877543
No 158
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.97 E-value=1.3e-28 Score=224.24 Aligned_cols=280 Identities=13% Similarity=0.111 Sum_probs=210.2
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEE
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPV 85 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~ 85 (352)
..+++ +.++++++ .+++++++|+++|++.++.+++++||+|+++.++|.++...+ +..|.++.
T Consensus 68 ~~~l~------~~la~~~g-------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~ 134 (392)
T 3qhx_A 68 RTALE------AALAAVED-------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYT 134 (392)
T ss_dssp HHHHH------HHHHHHTT-------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEE
T ss_pred HHHHH------HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEE
Confidence 44566 88888874 447999999999999999999999999999999999887766 67899999
Q ss_pred EecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccc
Q 018665 86 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 165 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~ 165 (352)
.++++ |++++++++++++++|++++|+||+|.+.| +++|+++|+++ |+++|+|++|+.... . .++
T Consensus 135 ~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~-g~~li~D~~~~~~~~-~---~~~ 199 (392)
T 3qhx_A 135 PVALA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADS-SAKVLVDNTFASPAL-Q---QPL 199 (392)
T ss_dssp EECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECTTTCTTT-C---CGG
T ss_pred EeCCC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHc-CCEEEEECCCccccc-C---ChH
Confidence 99863 899999999999999999999999999999 99999999999 999999999975311 1 111
Q ss_pred ccCCCCCCceEEEecccccccccc-ceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
..+.++++.|++|.+|.+| .++|+++.+ +++++.+......++..++++.+.++...++. +....+
T Consensus 200 -----~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-------l~~~~~ 267 (392)
T 3qhx_A 200 -----SLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-------LVLRMQ 267 (392)
T ss_dssp -----GGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-------HHHHHH
T ss_pred -----HhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-------HHHHHH
Confidence 1245599999999998666 789999987 58888888776666777888888887777764 334455
Q ss_pred HHHHHHHHHHHHhcccCCceec-CC----------------CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccC
Q 018665 244 AFRERRDFLVKSFGELEGVKMS-EP----------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 306 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~~g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 306 (352)
+..++.+.+.+.|++.|.+..+ .| ..|.++++.+++.. .....+.+.|. ..+
T Consensus 268 ~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----------~~~~~~~~~l~-~~~ 336 (392)
T 3qhx_A 268 RHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----------TAAEQLCAKTN-IFI 336 (392)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----------HHHHHHHHHCS-SSE
T ss_pred HHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----------HHHHHHHHhCC-Cce
Confidence 5667777788888877665433 11 12556788886521 14566666655 347
Q ss_pred EEeccCCCCC--------------------CCCeEEEEeecCHHHHHHHHHHHHHH
Q 018665 307 VALVPGDAFG--------------------DDTCIRISYAASLTTLQAAVERIKKG 342 (352)
Q Consensus 307 i~i~~g~~~~--------------------~~~~iRi~~~~~~~~l~~~~~~l~~~ 342 (352)
+.+..|+.+. .++.+|||++. ++.+..++.|.++
T Consensus 337 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~a 390 (392)
T 3qhx_A 337 LAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQA 390 (392)
T ss_dssp ECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHH
T ss_pred ECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHH
Confidence 7776665432 24679999998 2334444444443
No 159
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.97 E-value=3.4e-28 Score=222.23 Aligned_cols=282 Identities=16% Similarity=0.159 Sum_probs=202.6
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~ 82 (352)
.+...+++ +.++++++ .++.++++++++++..++.+++++||+|+++.+.|.++...+ +..|.
T Consensus 64 ~~~~~~l~------~~la~~~g-------~~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~ 130 (398)
T 1gc0_A 64 NPTLNLLE------ARMASLEG-------GEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGV 130 (398)
T ss_dssp CHHHHHHH------HHHHHHHT-------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTC
T ss_pred ChHHHHHH------HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCC
Confidence 34455667 89999885 236666777789999999999999999999999999988776 67899
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++.. |++++++.+++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++|+.+.+.
T Consensus 131 ~~~~~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~~~~~~~~~---- 195 (398)
T 1gc0_A 131 KLRHVDMA-------DLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKH-GATVVVDNTYCTPYLQ---- 195 (398)
T ss_dssp EEEEECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGG-TCEEEEECTTTHHHHC----
T ss_pred EEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHc-CCEEEEECCCcccccC----
Confidence 99998752 899999999989999999999999999999 99999999999 9999999999865432
Q ss_pred cccccCCCCCCceEEEecccccccccccee-EEEEcChhHHH-HHHhhhhc-cccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
.++ ..+.++++.|++|.+|.+|.|+ |+++++++.++ .+...... ++.+.+++.+.++.+.++. +.
T Consensus 196 ~~~-----~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~ 263 (398)
T 1gc0_A 196 RPL-----ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-------LN 263 (398)
T ss_dssp CGG-----GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-------HH
T ss_pred Cch-----hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-------HH
Confidence 111 1345699999999998788887 99999988776 56555444 5566888888877777753 23
Q ss_pred HHHHHHHHHHHHHHHHhcccCCc--------------eecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHH
Q 018665 240 KMVKAFRERRDFLVKSFGELEGV--------------KMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 302 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~--------------~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (352)
...++..++.+.+.+.|++++++ .+..+ ..+.++.+++++ ......+. +
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-------------~~~~~~~~-l 329 (398)
T 1gc0_A 264 LRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG-------------GIGAGRRF-M 329 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-------------HHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC-------------CHHHHHHH-H
Confidence 34445555666666666654332 22221 134445556642 22334444 4
Q ss_pred HccCEEecc---CCC------C----------------C-CCCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 303 DKAQVALVP---GDA------F----------------G-DDTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 303 ~~~gi~i~~---g~~------~----------------~-~~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
++.++.+.. |+. + + .++++|+|++. ++++++.+.+.|+++
T Consensus 330 ~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 330 NALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 445666554 321 0 0 14799999998 667788887777654
No 160
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=7.6e-29 Score=231.34 Aligned_cols=316 Identities=14% Similarity=0.116 Sum_probs=218.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCE---EEecCCCCCChHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS----PGDE---VIIPAPFWVSYPE 75 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~~~~---vl~~~~~~~~~~~ 75 (352)
.|+++.+..+++ +.++++++ .+++++|+|+++|+..++.++.+ +||. |+++.+.|..+..
T Consensus 71 ~y~~~~~~~~l~------~~la~~~~-------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~ 137 (467)
T 1ax4_A 71 AYAGSRNYYDLK------DKAKELFN-------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAA 137 (467)
T ss_dssp CSSSCHHHHHHH------HHHHHHHC-------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHH
T ss_pred ccccCccHHHHH------HHHHHHcC-------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhH
Confidence 477777888899 99999984 47999999999999999999887 8998 8988666666677
Q ss_pred HHHhcCCeEEEecccC----C----CCcccCHHHHHhhccC----CeeEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCC
Q 018665 76 MARIADATPVILPTRI----S----ENFLLDPKVLESKLTE----KSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHP 142 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~----~----~~~~~d~~~l~~~l~~----~~~~i~i~~p~npt-G~~~~~~~l~~l~~~~~~~~ 142 (352)
.+...|.+++.++... . .++.+|+++|++++++ ++++|++++|+||+ |.+++.+++++|+++|++|
T Consensus 138 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~- 216 (467)
T 1ax4_A 138 HVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQH- 216 (467)
T ss_dssp HHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHH-
T ss_pred HHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHc-
Confidence 8888999988776532 1 1345899999999973 68999999999999 8999999999999999999
Q ss_pred CEEEEecccccc--c--------ccCCCCccccccCCCC--CCceEEEeccccccccccceeEEEEcC-h-hHHHHHHhh
Q 018665 143 RLLVLSDEIYEH--I--------IYAPATHTSFASLPGM--WERTLTVNGFSKAFAMTGWRLGYIAGP-K-HFVAACNKI 208 (352)
Q Consensus 143 ~~~livD~~~~~--~--------~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g~~~g~l~~~-~-~~~~~~~~~ 208 (352)
|+++|+|+++.. . .+.+. ++..+... ....+++.|+||.+|++ . .|+++.+ + ++++.+...
T Consensus 217 gi~li~De~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~s~sK~~g~~-~-Gg~~~~~d~~~l~~~~~~~ 291 (467)
T 1ax4_A 217 GIFVVMDSARFCENAYFIKARDPKYKNA---TIKEVIFDMYKYADALTMSAKKDPLLN-I-GGLVAIRDNEEIFTLARQR 291 (467)
T ss_dssp TCCEEEECTTHHHHHHHHHHHCGGGTTC---CHHHHHHHHGGGCSEEEEETTSTTCCS-S-CEEEEESSCHHHHHHHHHH
T ss_pred CCEEEEEchhhhhcchhccccccccCCC---chhhhhhhhccccceEEEeccccCCCC-c-ceEEEeCCHHHHHHHHHhh
Confidence 999999998653 1 12221 21111000 00125678999998754 1 2677777 6 788777654
Q ss_pred hhcc----cc-CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCC
Q 018665 209 QSQF----TS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS 283 (352)
Q Consensus 209 ~~~~----~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~ 283 (352)
...+ .. +.+.....++..+++... .++.++ +..++++.+.+.|++ +++.+..+.+++++|++.......
T Consensus 292 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~----~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~ 365 (467)
T 1ax4_A 292 CVPMEGFVTYGGLAGRDMAAMVQGLEEGT-EEEYLH----YRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQ 365 (467)
T ss_dssp HHHHTCSTTTTTCCHHHHHHHHHHHHHTT-CHHHHH----HHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTT
T ss_pred ccccccccccCCccchHHHHHHHHHHHhh-hhhHHH----HHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhccc
Confidence 3211 11 223333333333454311 112332 233566778888877 488877788899999883221000
Q ss_pred -cccCCCCCCChHHHHHHHHHccCEEecc-CCCC-------C-----CCCeEEEEee---cCHHHHHHHHHHHHHHHhhh
Q 018665 284 -EAEGFGKIENSESLCRYLLDKAQVALVP-GDAF-------G-----DDTCIRISYA---ASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 284 -~~~~~~~~~~~~~~~~~l~~~~gi~i~~-g~~~-------~-----~~~~iRi~~~---~~~~~l~~~~~~l~~~~~~~ 346 (352)
...+ .+..++.+.|+++.||.+.| |..+ + ..+++|++++ .+++++++++++|++++++.
T Consensus 366 ~~~~~----~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 366 IPGDQ----FPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp SCGGG----CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred cccCC----CCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 0000 14678999984455999998 5321 1 1379999998 38999999999999998775
Q ss_pred C
Q 018665 347 R 347 (352)
Q Consensus 347 ~ 347 (352)
.
T Consensus 442 ~ 442 (467)
T 1ax4_A 442 A 442 (467)
T ss_dssp T
T ss_pred h
Confidence 3
No 161
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.97 E-value=2.9e-28 Score=224.22 Aligned_cols=278 Identities=13% Similarity=0.130 Sum_probs=205.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ . . +.+++++|+++++.++.+++++||+|+++.+.|.++... ++..|.+++.++.+
T Consensus 121 ~~lA~l~g-----~-~-~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~------ 187 (445)
T 1qgn_A 121 EKISALEG-----A-E-STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA------ 187 (445)
T ss_dssp HHHHHHHT-----C-S-EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS------
T ss_pred HHHHHHhC-----C-C-cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC------
Confidence 99999885 2 3 445555666999999999999999999999999987764 56789999999853
Q ss_pred cCHHHHHhhccCCe-eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~~l~~~~-~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|+++|++++++++ ++|++++|+||+|.+.| +++|+++|+++ |+++|+|++|+.... ..++ ..+.+
T Consensus 188 -d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~-g~~livD~a~~~~~~----~~~~-----~~g~D 253 (445)
T 1qgn_A 188 -DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEK-GALVCIDGTFATPLN----QKAL-----ALGAD 253 (445)
T ss_dssp -CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTCTTT----CCTT-----TTTCS
T ss_pred -CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCccccc----CCcc-----ccCCE
Confidence 8999999998888 99999999999999999 89999999999 999999999975321 1111 13456
Q ss_pred EEEecccccccccc-ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 254 (352)
Q Consensus 176 i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (352)
+++.|++|.+|..| .++|++++++++++.+......++..++++....+.+.++. +....++..++++.+.+
T Consensus 254 iv~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~~l~~ 326 (445)
T 1qgn_A 254 LVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-------LHLRVQQQNSTALRMAE 326 (445)
T ss_dssp EEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHH
T ss_pred EEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHHH
Confidence 99999999997443 36999999999988887665555555677665555555543 34444556667788888
Q ss_pred HhcccCCc-eecCC----------------CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-
Q 018665 255 SFGELEGV-KMSEP----------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG- 316 (352)
Q Consensus 255 ~l~~~~g~-~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~- 316 (352)
.|++.|++ .+..| ..|.++++.+++.. .....+.+.|. ..++.+..|+.+.
T Consensus 327 ~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~----------~~~~~~l~~l~-~~~i~~s~G~~~sl 395 (445)
T 1qgn_A 327 ILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL----------LTTAKFVDALK-IPYIAPSFGGCESI 395 (445)
T ss_dssp HHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH----------HHHHHHHHHCS-SSEECSCCCSSSCE
T ss_pred HHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH----------HHHHHHHHhCC-CceEeccCCCCcee
Confidence 89888776 34333 13556777776420 02445555433 2367777766542
Q ss_pred ----------------------CCCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 317 ----------------------DDTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 317 ----------------------~~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
.++.+|+|++. ||++++++.|+++++.
T Consensus 396 ~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 396 VDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALDS 444 (445)
T ss_dssp EECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred eecccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 14789999994 5799999999988864
No 162
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=3e-29 Score=231.89 Aligned_cols=315 Identities=13% Similarity=0.129 Sum_probs=201.1
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHh-cCC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARI-ADA 82 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~-~g~ 82 (352)
+++...+++ +.+++++. ..++|++++|++++++.+++.+.. ++++|+++.|+|+++...+.. .|.
T Consensus 93 ~~~~~~~l~------~~la~~~~------~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~ 160 (434)
T 3l44_A 93 PTALEVKFA------KMLKEAMP------ALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGS 160 (434)
T ss_dssp CCHHHHHHH------HHHHHHCT------TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC---
T ss_pred CCHHHHHHH------HHHHHhCC------CCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCC
Confidence 344444555 66666642 578999999999999999988754 678999999999876543332 222
Q ss_pred eEEEecccCCCCc--------c----cCHHHHHhhcc---CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEE
Q 018665 83 TPVILPTRISENF--------L----LDPKVLESKLT---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLV 146 (352)
Q Consensus 83 ~v~~i~~~~~~~~--------~----~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~l 146 (352)
....+..+...+. . .|++.|+++++ +++++++++.++|++|... +.+++++|.++|++| |+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~ill 239 (434)
T 3l44_A 161 GPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEA-GALV 239 (434)
T ss_dssp ----CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTT-TCEE
T ss_pred cccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHc-CCEE
Confidence 1111111110100 0 18899999886 3556666665667777665 788999999999999 9999
Q ss_pred EecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh---hhccccCCChHHHHH
Q 018665 147 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKA 223 (352)
Q Consensus 147 ivD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 223 (352)
|+||+|.++ ..+.. ......... ..+.++||.+| +|+|+|++++++++++.+... ....+++.|++.+.+
T Consensus 240 I~DEv~~g~-~~g~~-~~~~~~~~~----~di~t~sK~~~-~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aa 312 (434)
T 3l44_A 240 IYDEVITAF-RFMYG-GAQDLLGVT----PDLTALGKVIG-GGLPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMAS 312 (434)
T ss_dssp EEECTTTTT-TSSSS-CHHHHHTCC----CSEEEEEGGGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHH
T ss_pred EEeccccce-ecccc-HHHHHcCCC----CCeeehhhhhc-CCcCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHH
Confidence 999999987 54432 111111111 11568999998 899999999999998877652 234567899999999
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCC--CCCCChHHHHHHH
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGF--GKIENSESLCRYL 301 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 301 (352)
+.++++.... ++..++..+..+..++.+.+.+...+.+.... ..|.++++.+.+......... .......++.+.|
T Consensus 313 a~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (434)
T 3l44_A 313 GIACLEVLQQ-EGLYEKLDELGATLEKGILEQAAKHNIDITLN-RLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLM 390 (434)
T ss_dssp HHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE-EETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE-eeccEEEEEEecCcccchhhccccCHHHHHHHHHHH
Confidence 9998875221 23333333333333334433333332333333 345556666532110000000 0000236788888
Q ss_pred HHccCEEeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 302 LDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 302 ~~~~gi~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
.++ ||.+.+++ .+.+|+++..+++++++++++|++++++++
T Consensus 391 ~~~-Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~l~~~l~~~~ 431 (434)
T 3l44_A 391 LQE-GVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGRAFAALA 431 (434)
T ss_dssp HHT-TEECCSST----TCCEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHC-CeEEeecC----CCcEEEecccCHHHHHHHHHHHHHHHHHHH
Confidence 876 99998874 457899877799999999999999998764
No 163
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.97 E-value=1.8e-28 Score=227.48 Aligned_cols=317 Identities=11% Similarity=0.040 Sum_probs=207.0
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC----C----CCEEEecCCCCCChH
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS----P----GDEVIIPAPFWVSYP 74 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~----~----~~~vl~~~~~~~~~~ 74 (352)
|....+..+.+ +.+++++. ..+ ...++|++++|+++|++.+++.+.. + +++|++++|+|+++.
T Consensus 79 ~~~~~~~~~~~------~~la~~l~~~~~--~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~ 150 (448)
T 3dod_A 79 STLLGMTNVPA------TQLAETLIDISP--KKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDT 150 (448)
T ss_dssp CCCSSSEEHHH------HHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-------
T ss_pred ccccccCCHHH------HHHHHHHHHhCC--CCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCcc
Confidence 33344555666 77777776 443 3458999999999999999998754 3 489999999998766
Q ss_pred HHHHhcC-------------CeEEEecccCCCCcc-----------cCHHHHHhhcc---CCeeEEEEcCCC-CCcc-cC
Q 018665 75 EMARIAD-------------ATPVILPTRISENFL-----------LDPKVLESKLT---EKSRLLILCSPS-NPTG-SV 125 (352)
Q Consensus 75 ~~~~~~g-------------~~v~~i~~~~~~~~~-----------~d~~~l~~~l~---~~~~~i~i~~p~-nptG-~~ 125 (352)
......+ ..+..++.+ ..+. .|++.|+++++ +++++|+++.++ |++| .+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~ 228 (448)
T 3dod_A 151 IGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIV 228 (448)
T ss_dssp ----------------------CEEECCC--CCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEE
T ss_pred HHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeec
Confidence 4333221 223344433 2111 24788998886 456677777666 8887 55
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHH
Q 018665 126 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAA 204 (352)
Q Consensus 126 ~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~ 204 (352)
++.+++++|.++|++| |+++|+||+|+++.+.|... ....... ...+.++||.++ +| +|+|++++++++++.
T Consensus 229 ~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~~~-a~~~~~~----~~di~t~sK~l~-~G~~~ig~v~~~~~~~~~ 301 (448)
T 3dod_A 229 MPEGYLAGVRELCTTY-DVLMIVDEVATGFGRTGKMF-ACEHENV----QPDLMAAGKGIT-GGYLPIAVTFATEDIYKA 301 (448)
T ss_dssp CCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSS-GGGGGTC----CCSEEEECGGGG-TTSSCCEEEEEEHHHHHT
T ss_pred CCHHHHHHHHHHHHHh-CCEEEEeccccCCCcccchh-hhhhcCC----CCCEEEeccccc-CCcCceEEEEECHHHHHH
Confidence 6788899999999999 99999999999887665422 2221111 122457899998 68 599999999999988
Q ss_pred HHh-------hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeec
Q 018665 205 CNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 277 (352)
Q Consensus 205 ~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~ 277 (352)
+.. .....+++.+++.+.++.++++.... ++..+++.+..+..++.+.+ +.+++.+.... ..|.++++.+
T Consensus 302 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~-~~g~~~~~~~ 378 (448)
T 3dod_A 302 FYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES-ENIVEQVAEKSKKLHFLLQD-LHALPHVGDIR-QLGFMCGAEL 378 (448)
T ss_dssp TCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEE-EETTEEEEEE
T ss_pred hhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEE-eeeEEEEEEE
Confidence 765 33456678899999999999874211 23344555555555555655 55554444433 3455677777
Q ss_pred CCccCCcccCCCCCC-ChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 278 STYYGSEAEGFGKIE-NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 278 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
++....... +.... .+.++++.|+++ ||.+.|+ .+++|++++. +++++++++++|+++++++.
T Consensus 379 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~-Gv~~~~~-----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 379 VRSKETKEP-YPADRRIGYKVSLKMREL-GMLTRPL-----GDVIAFLPPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp CSBTTTTBC-CCGGGCHHHHHHHHHHHT-TEECCEE-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccc-cchhhHHHHHHHHHHHHC-CcEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 653210000 00000 046788888876 9999886 3799997665 99999999999999998764
No 164
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.97 E-value=5.7e-29 Score=230.90 Aligned_cols=320 Identities=12% Similarity=0.067 Sum_probs=208.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~ 79 (352)
+|....+..+.+ ..+++.+. ..+.. ..++|++++|+++|++.+++.+.. .+++|++..++|+++...+..
T Consensus 95 ~~~~~~~~~~~~------~~la~~l~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~ 167 (451)
T 3oks_A 95 HTCFMVTPYEGY------VAVCEQLNRLTPVR-GDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMA 167 (451)
T ss_dssp CCTTTTSCCHHH------HHHHHHHHHHSSCC-SSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHH
T ss_pred cccCCccCCHHH------HHHHHHHHHhCCcC-CCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHH
Confidence 444445566666 77777776 33321 357999999999999999987653 457999999999987755443
Q ss_pred cC--------------CeEEEecccCCCC-----------cccCHHHHHhhc----cCCeeEEEEcCCC-CCccc-CCCH
Q 018665 80 AD--------------ATPVILPTRISEN-----------FLLDPKVLESKL----TEKSRLLILCSPS-NPTGS-VYPK 128 (352)
Q Consensus 80 ~g--------------~~v~~i~~~~~~~-----------~~~d~~~l~~~l----~~~~~~i~i~~p~-nptG~-~~~~ 128 (352)
.+ ..+..++.+.... ...+++.+++.+ ..+..+++++.|. +.+|. .++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~ 247 (451)
T 3oks_A 168 LTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPAD 247 (451)
T ss_dssp HCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCT
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCH
Confidence 21 1455565541100 001244444443 3344445555554 44454 4567
Q ss_pred HHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh
Q 018665 129 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 208 (352)
Q Consensus 129 ~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~ 208 (352)
+++++|.++|++| |+++|+||+|.++.+.|.. ........ ...+.|+||.++ +|+|+||+++++++++.+...
T Consensus 248 ~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~-~~~~~~~~----~pdi~t~sK~l~-~G~~iG~v~~~~~~~~~~~~~ 320 (451)
T 3oks_A 248 GFLPTLLDWCRKN-DVVFIADEVQTGFARTGAM-FACEHEGI----DPDLIVTAKGIA-GGLPLSAVTGRAEIMDSPHVS 320 (451)
T ss_dssp THHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-SGGGGGTC----CCSEEEECGGGG-TTSSCEEEEEEHHHHTCSCTT
T ss_pred HHHHHHHHHHHHc-CCEEEEEecccCCCccccc-hhhhhcCC----CCCeeeehhhhh-CCcceEEEEECHHHHhhhcCC
Confidence 7899999999999 9999999999988766542 22222211 122448999998 699999999999998888766
Q ss_pred hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCC
Q 018665 209 QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGF 288 (352)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~ 288 (352)
....+++.|++.+.++.++++.... ++..++..+..+..++.+.+.+++++.+..+.+. |.++++.+.+........
T Consensus 321 ~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~- 397 (451)
T 3oks_A 321 GLGGTYGGNPIACAAALATIETIES-EGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGR-GAMIAMELVKAGTTEPDA- 397 (451)
T ss_dssp SBCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEBSTTSCCBCH-
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEe-eEEEEEEEecCccCCCCH-
Confidence 6667788999999999999874211 2333444444444444444444445555444433 455777663210000000
Q ss_pred CCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 289 GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 289 ~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
....++.+.|+++ ||.+.|++.+ .+++|++++. +++++++++++|++++++
T Consensus 398 ---~~~~~~~~~l~~~-Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 398 ---DLTKALCAGAHAA-GVIVLSCGTY--GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp ---HHHHHHHHHHHHT-TEECEEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHhC-CcEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 1356788888876 9999997644 4789998776 899999999999999864
No 165
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.97 E-value=5.6e-29 Score=231.06 Aligned_cols=300 Identities=14% Similarity=0.112 Sum_probs=208.0
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHH-HHHhcCC--------
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIADA-------- 82 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~-~~~~~g~-------- 82 (352)
+.+++.+. ..+ ...++|++++|++++++.+++++.. ++++|++.+|+|++... .+...|.
T Consensus 96 ~~l~~~la~~~~--~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~ 173 (449)
T 3a8u_X 96 FQLAEKITDLTP--GNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFG 173 (449)
T ss_dssp HHHHHHHHTTSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTC
T ss_pred HHHHHHHHHhCC--CCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccC
Confidence 56666665 222 4578999999999999999988753 67899999999987653 4544431
Q ss_pred ----eEEEecccCC--CCc-ccC--------HHHHHhhcc----CCeeEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCC
Q 018665 83 ----TPVILPTRIS--ENF-LLD--------PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHP 142 (352)
Q Consensus 83 ----~v~~i~~~~~--~~~-~~d--------~~~l~~~l~----~~~~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~ 142 (352)
.+..++.+.. .++ .+| +++|+++++ +++++++++..+|++|. ..|.+++++|.++|+++
T Consensus 174 ~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~- 252 (449)
T 3a8u_X 174 QPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQH- 252 (449)
T ss_dssp CCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH-
T ss_pred CCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHh-
Confidence 3445554321 110 135 899999886 35566555544678996 56788999999999999
Q ss_pred CEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh---------hhcc
Q 018665 143 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI---------QSQF 212 (352)
Q Consensus 143 ~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~---------~~~~ 212 (352)
|+++|+||+|.++.+.+.. ..+..... ..+ +.|+||.++ +| +|+|++++++++++.+... ....
T Consensus 253 ~~~li~Dev~~~~g~~g~~-~~~~~~~~-~~d---i~s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 326 (449)
T 3a8u_X 253 NILLVFDEVITGFGRTGSM-FGADSFGV-TPD---LMCIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGY 326 (449)
T ss_dssp TCEEEEECTTTTTTTTSSS-SHHHHHTC-CCS---EEEECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCC
T ss_pred CCEEEEeccccCccccCcc-hhhhhcCC-CCC---EEEEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccC
Confidence 9999999999877655431 11111111 122 338899998 67 8999999999998888763 1234
Q ss_pred ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec--CCCCceEEEeecCCccCCcccCCCC
Q 018665 213 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGK 290 (352)
Q Consensus 213 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~ 290 (352)
+++.|++.+.++.++++.. .+ +++.++++++.+++.+.|++++.+..+ .+..|.++++++++..... .
T Consensus 327 t~~~~~~~~aa~~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~--~--- 396 (449)
T 3a8u_X 327 TYSAHPVACAAGLAALCLL---QK--ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDA--I--- 396 (449)
T ss_dssp TTTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBS--S---
T ss_pred CCcccHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccc--c---
Confidence 5678899998888888741 11 245667777788888888764222221 1345677888887531000 0
Q ss_pred CCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 291 IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 291 ~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+..++.+.|.++ ||.+.++ .+++||+++. +++++++++++|+++++++
T Consensus 397 -~~~~~~~~~l~~~-Gv~v~~~-----g~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 397 -VRPFEAGMALWKA-GFYVRFG-----GDTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp -HHHHHHHHHHHHH-TEECEEE-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -ccHHHHHHHHHHC-CcEEecC-----CCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 0123688888876 9999986 2789999764 9999999999999998764
No 166
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.96 E-value=4.8e-28 Score=219.37 Aligned_cols=294 Identities=15% Similarity=0.141 Sum_probs=216.6
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEecCCCCCChHHHHHhc
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
|.+.+...+++ +.++++++ . +++++++|+++++..++.++ .++||+|+++.|+|.++...++..
T Consensus 28 ~~~~~~~~~l~------~~la~~~~-----~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~ 94 (375)
T 2fnu_A 28 LTQGKRSLLFE------EALCEFLG-----V--KHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLES 94 (375)
T ss_dssp CSSSHHHHHHH------HHHHHHHT-----C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHHT
T ss_pred ccCChHHHHHH------HHHHHHhC-----C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHHHC
Confidence 44555566778 99999986 2 39999999999999999999 889999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
|.+++.++++.+. .+|+++|++++++++++|+++++ +|.+.| +++|.++|+++ |+++|+|++|+.+....
T Consensus 95 g~~~~~~~~~~~~--~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~-~~~li~D~a~~~~~~~~- 164 (375)
T 2fnu_A 95 GYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKH-SLSFLSDSSHALGSEYQ- 164 (375)
T ss_dssp TCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHH-TCEEEEECTTCTTCEET-
T ss_pred CCEEEEeccCCCC--CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHc-CCEEEEECccccCCeEC-
Confidence 9999999987533 68999999999888998887776 999999 89999999999 99999999998643211
Q ss_pred CccccccCCCCCCceEEEeccc--cccccccceeEEEEc-C-hhHHHHHHhhhhcc--------------c--cCCChHH
Q 018665 161 THTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAG-P-KHFVAACNKIQSQF--------------T--SGASSIS 220 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~g~l~~-~-~~~~~~~~~~~~~~--------------~--~~~~~~~ 220 (352)
... +.. .+ .+.+.|+| |.+| +| +|++++ + +++++.+....... + .+.+.+.
T Consensus 165 -~~~---~~~-~~-~i~~~s~s~~K~~~-~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (375)
T 2fnu_A 165 -NKK---VGG-FA-LASVFSFHAIKPIT-TA--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQ 235 (375)
T ss_dssp -TEE---TTS-SS-SEEEEECCTTSSSC-CS--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHH
T ss_pred -Cee---ccc-cC-CeEEEeCCCCCCcc-cc--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHH
Confidence 011 111 12 37778887 9997 35 677776 3 67877776543211 1 1233333
Q ss_pred HHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC-----CceEEEeecCCccCCcccCCCCCC-Ch
Q 018665 221 QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIE-NS 294 (352)
Q Consensus 221 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~ 294 (352)
..+.... .+++++..++.+++++++.+.|++++++.+..+. .++++++.++... . +.
T Consensus 236 ~a~~~~~-------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 298 (375)
T 2fnu_A 236 SALGLSQ-------LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF----------FTCK 298 (375)
T ss_dssp HHHHHHH-------HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG----------GGGH
T ss_pred HHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccc----------cchH
Confidence 3222222 2446677888899999999999998888876541 2344566665310 1 46
Q ss_pred HHHHHHHHHccCEEeccCCC-------CC-------C-------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 295 ESLCRYLLDKAQVALVPGDA-------FG-------D-------DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 295 ~~~~~~l~~~~gi~i~~g~~-------~~-------~-------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
.++.+.|.++ ||.+..+.. ++ . .+++||+++. +++|++++++.|++++++++
T Consensus 299 ~~l~~~L~~~-gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 373 (375)
T 2fnu_A 299 KLILESLHKR-GILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESFK 373 (375)
T ss_dssp HHHHHHHHHT-TEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHC-CCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 7888888765 999873211 10 1 1579999987 88999999999999988764
No 167
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.96 E-value=4.6e-28 Score=225.98 Aligned_cols=312 Identities=13% Similarity=0.114 Sum_probs=214.5
Q ss_pred CCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHHHHH
Q 018665 8 QGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPEMAR 78 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~~~~ 78 (352)
.+..+.+ ..+++++. ..+ ...+.|++++|+++|+..+++.+.+ .+++|++.++.|+++.....
T Consensus 93 ~~~~~~~------~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~ 164 (476)
T 3i5t_A 93 YMATSPA------ARLAEKIATLTP--GDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTA 164 (476)
T ss_dssp TCBCHHH------HHHHHHHHTTSS--TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHH
T ss_pred ccCCHHH------HHHHHHHHhcCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhc
Confidence 4556677 88888887 443 3457999999999999999998752 35799999999998875554
Q ss_pred hcCC-------------eEEEecccCCCC-cccC--------HHHHHhhcc----CCeeEEEEcCCCCCccc-CCCHHHH
Q 018665 79 IADA-------------TPVILPTRISEN-FLLD--------PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLL 131 (352)
Q Consensus 79 ~~g~-------------~v~~i~~~~~~~-~~~d--------~~~l~~~l~----~~~~~i~i~~p~nptG~-~~~~~~l 131 (352)
..+. .+..++.+...+ +..| ++.|++.++ +++++|+++.+++++|. +++.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L 244 (476)
T 3i5t_A 165 ACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYH 244 (476)
T ss_dssp HTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHH
T ss_pred cccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHH
Confidence 3322 223333221100 1112 778888875 46778888888888885 7788899
Q ss_pred HHHHHHHHhCCCEEEEecccccccccCCCCccccc-cCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh-
Q 018665 132 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA-SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI- 208 (352)
Q Consensus 132 ~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~- 208 (352)
++|.++|++| |+++|+||+|.++.+.|.. .... .... .++ +.+++|.+| +| +|+|++++++++++.+...
T Consensus 245 ~~l~~lc~~~-gillI~DEv~~g~gr~G~~-~~~~~~~~v-~pd---i~t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~ 317 (476)
T 3i5t_A 245 ARFKAICEKH-DILYISDEVVTGFGRCGEW-FASEKVFGV-VPD---IITFAKGVT-SGYVPLGGLAISEAVLARISGEN 317 (476)
T ss_dssp HHHHHHHHHT-TCEEEEECTTTTTTTTSSS-CHHHHTTCC-CCS---EEEECGGGG-TTSSCCEEEEECHHHHHTTSGGG
T ss_pred HHHHHHHHHc-CCEEEEEecccCCccccCc-eeeecccCC-Ccc---hhhhhhhhc-CCCcCeEEEEECHHHHHHHhcCC
Confidence 9999999999 9999999999998777642 2222 2211 122 346889998 78 9999999999999988653
Q ss_pred ------hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcc---cCCceecCCCCceEEEeecCC
Q 018665 209 ------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFST 279 (352)
Q Consensus 209 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~g~~~~~~~~~ 279 (352)
....+++.|+++++++.++++.. +. +++.++++++.+++.+.|++ +|.+..+.+.+. ++++++.+
T Consensus 318 ~~~~~~~~~~t~~~np~a~aAa~aaL~~~----~~-~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~-~~~i~~~~ 391 (476)
T 3i5t_A 318 AKGSWFTNGYTYSNQPVACAAALANIELM----ER-EGIVDQAREMADYFAAALASLRDLPGVAETRSVGL-VGCVQCLL 391 (476)
T ss_dssp CTTCEECCCCTTTTCHHHHHHHHHHHHHH----HH-TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETT-EEEEEECC
T ss_pred cccccccccCCCCcCHHHHHHHHHHHHHH----Hh-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eeEEEEec
Confidence 33456789999999999999751 11 34455566666666666654 344555544444 56666654
Q ss_pred ccCCcccCCCC-CCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 280 YYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 280 ~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
...... .+.. ......+.+.|+++ ||.+.|. .+++||+++. +++++++++++|+++++++.
T Consensus 392 ~~~~~~-~~~~~~~~~~~~~~~l~~~-Gv~v~~~-----g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~ 455 (476)
T 3i5t_A 392 DPTRAD-GTAEDKAFTLKIDERCFEL-GLIVRPL-----GDLCVISPPLIISRAQIDEMVAIMRQAITEVS 455 (476)
T ss_dssp C------CCHHHHHHHHHHHHHHHHT-TEECEEE-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred Cccccc-cccchhHHHHHHHHHHHHC-CCEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 210000 0000 00155788888876 9999884 2899999664 99999999999999997764
No 168
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=1.4e-28 Score=224.76 Aligned_cols=191 Identities=14% Similarity=0.162 Sum_probs=154.3
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIAD 81 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g 81 (352)
+.++..+++ +.+|++++ ..+.|+++ +|++++..++. ++++||+|+++.|+|.++... ++..|
T Consensus 65 ~~p~~~~l~------~~la~~~g------~~~~i~~~-sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G 130 (403)
T 3cog_A 65 GNPTRNCLE------KAVAALDG------AKYCLAFA-SGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFG 130 (403)
T ss_dssp -CHHHHHHH------HHHHHHHT------CSEEEEES-CHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGT
T ss_pred CCchHHHHH------HHHHHHhC------CCcEEEEC-CHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcC
Confidence 345566788 99999986 23555555 55699999998 889999999999999986554 35789
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC-EEEEecccccccccCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~-~~livD~~~~~~~~~~~ 160 (352)
.+++.++.+ |++++++++++++++|++++|+||+|.++| +++|+++|+++ | +++|+|++|+.+.+.
T Consensus 131 ~~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~-g~~~livD~~~~~~~~~-- 197 (403)
T 3cog_A 131 LKISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKH-GDIILVVDNTFMSPYFQ-- 197 (403)
T ss_dssp CEEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSS-SCCEEEEECTTTCTTTC--
T ss_pred CEEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCCEEEEECCCcccccC--
Confidence 999999864 789999999999999999999999999999 99999999999 9 999999999875321
Q ss_pred CccccccCCCCCCceEEEecccccccccc-ceeEEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcc
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
.++. .+.++++.|++|.++.+| .++|+++++ +++++.+......++...+++.+.++...++.
T Consensus 198 --~~~~-----~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~ 262 (403)
T 3cog_A 198 --RPLA-----LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT 262 (403)
T ss_dssp --CTTT-----TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred --Cccc-----cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH
Confidence 1211 356799999999997555 478999984 78888888776666667888888888877764
No 169
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.96 E-value=8.3e-28 Score=217.84 Aligned_cols=295 Identities=15% Similarity=0.225 Sum_probs=216.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
.|++.++..+++ +.++++++ .+++++++|+++++..++.++ .++||+|+++.|+|.++...++..|
T Consensus 33 ~~~~~~~~~~l~------~~la~~~~-------~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g 99 (374)
T 3uwc_A 33 DFTLGAELEKFE------KRFAALHN-------APHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVGAIVQAG 99 (374)
T ss_dssp CCSSCHHHHHHH------HHHHHHTT-------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTT
T ss_pred CcccChhHHHHH------HHHHHHhC-------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHcC
Confidence 467778888999 99999985 348899999999999999999 8999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc-CCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY-APA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~-~~~ 160 (352)
.+++.++++ .++.+|++++++++++++++++ |+||||...+ +++|.++|+++ |+++|+|++|+.+.. .+.
T Consensus 100 ~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~---~~~i~~~~~~~-~~~li~D~~~~~g~~~~~~ 170 (374)
T 3uwc_A 100 ATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD---MPALAKIAKKH-NLHIVEDACQTILGRINDK 170 (374)
T ss_dssp CEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHT-TCEEEEECTTCTTCEETTE
T ss_pred CEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC---HHHHHHHHHHc-CCEEEEeCCCccCceeCCe
Confidence 999999987 4567899999999988888777 8899999999 99999999999 999999999986422 111
Q ss_pred CccccccCCCCCCceEEEeccc--cccccccceeEEEEcC-hhHHHHHHhhhhc------------cccCCChHHHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQ------------FTSGASSISQKAGV 225 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~g~l~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 225 (352)
.... ..++++.|+| |.++..|. .|+++++ +.+.+.+...... ++...+.+...+..
T Consensus 171 ---~~~~-----~~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~ 241 (374)
T 3uwc_A 171 ---FVGS-----WGQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIAN 241 (374)
T ss_dssp ---ETTS-----SSSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHH
T ss_pred ---eccc-----cccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHH
Confidence 1111 1247788866 99974364 7888765 4676666654321 11122333332222
Q ss_pred HHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCC-ceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 226 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG-VKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g-~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
.. .+.+++..++.+++.+.+.+.|+++++ +.+... ..+...|..++-.. .+..++.+.|.+
T Consensus 242 ~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~L~~ 304 (374)
T 3uwc_A 242 RL-------MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV----------KYRDQLFQYLKD 304 (374)
T ss_dssp HH-------GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE----------TTHHHHHHHHHH
T ss_pred HH-------HHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc----------CCHHHHHHHHHH
Confidence 22 234566777788888899999998866 666422 22221211111100 167789999887
Q ss_pred ccCEEeccCCCCC----------------C-------CCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 304 KAQVALVPGDAFG----------------D-------DTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 304 ~~gi~i~~g~~~~----------------~-------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+ ||.+.++.... . ...+|++++. +++|++++++.|++++++.
T Consensus 305 ~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 305 N-GIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp T-TBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred C-CCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 6 99998875100 0 1579999887 8999999999999999764
No 170
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.96 E-value=2.5e-29 Score=226.87 Aligned_cols=283 Identities=11% Similarity=0.078 Sum_probs=206.8
Q ss_pred HHHHHHHH-hcCCCCCCC-c-EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCCh--HHHHHhcCCeEEEecccCC--C
Q 018665 21 QQFVINLK-ENGLSYTPD-Q-ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRIS--E 93 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~-~-i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~--~~~~~~~g~~v~~i~~~~~--~ 93 (352)
+.+.+.+. ..| ++++ + +++|+|+++++..++.+++++||+|+++.+.+.+. ...++..| +++.++++.+ .
T Consensus 52 ~~~~~~la~~~g--~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~ 128 (362)
T 2c0r_A 52 NEAQARLLALLG--NPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNY 128 (362)
T ss_dssp HHHHHHHHHHTT--CCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTT
T ss_pred HHHHHHHHHHhC--CCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEeccccccc
Confidence 44444444 334 3443 6 57789999999999999999999999887765543 35677789 9999988632 2
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCC
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 172 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
+..+|.++++ +++++++|++++|+||||.. .+ +++| + |+++|+|++|+.+. .+..+.. .
T Consensus 129 ~~~~~~~~~~--i~~~t~~v~~~~~~n~tG~~~~~---l~~i------~-~~~vivD~a~~~~~----~~~~~~~----~ 188 (362)
T 2c0r_A 129 MTLPKLQEIQ--LQDNAAYLHLTSNETIEGAQFKA---FPDT------G-SVPLIGDMSSDILS----RPFDLNQ----F 188 (362)
T ss_dssp CSCCCGGGCC--CCTTEEEEEEESEETTTTEECSS---CCCC------T-TSCEEEECTTTTTS----SCCCGGG----C
T ss_pred ccCCCHHHcc--cCCCcCEEEEeCCcCccceeccc---cccc------C-CCEEEEEChhhccC----CccchhH----C
Confidence 2234666654 67789999999999999996 45 5554 8 99999999998642 1222221 1
Q ss_pred CceEEEeccccccccccceeEEEEcChhHHHHHHhh------------hhccccCCChHHHHHHHHHhcccCCChH-HHH
Q 018665 173 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE-VVS 239 (352)
Q Consensus 173 ~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~ 239 (352)
.+++.|+||++|++| +||+++++++++.+... .....++++.+.+.++.++++.. ... .++
T Consensus 189 --d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~--~~~~~~~ 262 (362)
T 2c0r_A 189 --GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWI--EERGGLE 262 (362)
T ss_dssp --SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHH--HHTTHHH
T ss_pred --cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHH--HHhCCHH
Confidence 488889999998666 89999998876655321 11233568888888888888741 122 578
Q ss_pred HHHHHHHHHHHHHHHHhcccCCc-eecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 240 KMVKAFRERRDFLVKSFGELEGV-KMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g~-~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
+++++++++++++.+.|++++++ .+..+ ..+.++++.+++.. ++.++++.|.++ ||.+.+|..+
T Consensus 263 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~-gi~~~~g~~~ 330 (362)
T 2c0r_A 263 GVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEE-----------LEKEFVKASEQE-GFVGLKGHRS 330 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHH-----------HHHHHHHHHHHT-TEESCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcc-----------hHHHHHHHHHHC-CCeeccCCCC
Confidence 88999999999999999988435 65421 23455777776421 577899888765 9998887655
Q ss_pred CCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 316 GDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 316 ~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+++|+|++. ++++++++++.|++++++.
T Consensus 331 --~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 331 --VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp --TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5689999986 8899999999999988754
No 171
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.96 E-value=1.3e-29 Score=228.40 Aligned_cols=281 Identities=11% Similarity=0.064 Sum_probs=207.2
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCCh-HHHHHHHHHHhcCC---CCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGA-KQSILQAVLAVCSP---GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~-~~a~~~~~~~l~~~---~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .+ ++++|++++|+ ++++..++.++..+ ++.|+++.++|.. ...++..| +++.++++++++ .
T Consensus 55 ~~la~~~g---~~-~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~ 127 (360)
T 1w23_A 55 NLLRELLQ---IP-NDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-Y 127 (360)
T ss_dssp HHHHHHHT---CC-TTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-S
T ss_pred HHHHHHhC---CC-CCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-c
Confidence 66776665 22 35699999999 99999999998765 4567777766654 34567789 999999864232 3
Q ss_pred cCHHHHHh-hccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 97 LDPKVLES-KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 97 ~d~~~l~~-~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
+|++++++ ++++++++|++++|+||||.+++ ++. +++ |+++|+|++|+.+. .+.++.. . .
T Consensus 128 ~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~i~------~~~-~~~li~D~a~~~~~----~~~~~~~----~--d 188 (360)
T 1w23_A 128 QSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ--NFP------EIN-HAPLIADMSSDILS----RPLKVNQ----F--G 188 (360)
T ss_dssp CSCCCGGGCCCCTTEEEEEEESEETTTTEECS--SCC------CCC-SSCEEEECTTTTTS----SCCCGGG----C--S
T ss_pred CCccchHhhccCCCCCEEEEeCCCCCcceecc--ccc------ccC-CceEEEechhhcCC----CCcCccc----C--C
Confidence 78999999 88889999999999999999987 232 278 99999999998642 1122222 1 3
Q ss_pred EEEeccccccccccceeEEEEcChhHHHHHHhhh------------hccccCCChHHHHHHHHHhcccCCChH-HHHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ------------SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMV 242 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 242 (352)
+++.|+||.+|++| +||+++++++++.+.... .....+++...+.++.++++.. ... ++++++
T Consensus 189 i~~~s~sK~~~~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~~ 264 (360)
T 1w23_A 189 MIYAGAQKNLGPSG--VTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWI--KDLGGAEAIA 264 (360)
T ss_dssp EEEEETTTTTSCTT--CEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHH--HHTTHHHHHH
T ss_pred EEEEEcccccCCCC--cEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHH--HHhcCHHHHH
Confidence 88999999998555 899999988876554321 1112345666667777777541 122 678889
Q ss_pred HHHHHHHHHHHHHhcccCCc-eec-CC--CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCC
Q 018665 243 KAFRERRDFLVKSFGELEGV-KMS-EP--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 318 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~-~~~-~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~ 318 (352)
++++++++++.+.|++++++ ... .+ .+++++++.+++.. +..++.+.|.++ ||.+.+|..+ +
T Consensus 265 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~-gi~~~~~~~~--~ 330 (360)
T 1w23_A 265 KQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEE-----------LNQQFLAKAKEQ-GFVGLNGHRS--V 330 (360)
T ss_dssp HHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHH-----------HHHHHHHHHHHT-TEESCBCCTT--T
T ss_pred HHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCc-----------cHHHHHHHHHHC-CeeeecCCCC--C
Confidence 99999999999999988655 543 23 34657888887531 466788887765 9999887653 6
Q ss_pred CeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 319 TCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 319 ~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
+++|++++. +++++++++++|++++++
T Consensus 331 ~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 331 GGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp CSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 899999986 889999999999998764
No 172
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=2.3e-28 Score=228.10 Aligned_cols=292 Identities=17% Similarity=0.126 Sum_probs=217.0
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHh----cCCCC-----EEEecCCCCCChHHHHHhcCCeEEEeccc
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAV----CSPGD-----EVIIPAPFWVSYPEMARIADATPVILPTR 90 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l----~~~~~-----~vl~~~~~~~~~~~~~~~~g~~v~~i~~~ 90 (352)
+.+++++. ..|.+ ..+++++|+++++..++.++ .++|| +|+++.+.|..+...++..|.+++.++++
T Consensus 110 ~~l~~~la~~~g~~---~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~ 186 (474)
T 1wyu_B 110 WELGEYLKALTGMD---AITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG 186 (474)
T ss_dssp HHHHHHHHHHHTCS---EEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHCCC---ceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC
Confidence 55555555 34433 24678899999998766554 34666 99999999999999999999999999986
Q ss_pred CCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCC
Q 018665 91 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 169 (352)
Q Consensus 91 ~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~ 169 (352)
.++.+|+++|++++++++++|++++| ||+|.+ .+ +++|+++|+++ |+++|+|++|+...+ +. .....
T Consensus 187 --~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~---l~~i~~l~~~~-g~~li~Dea~~~~~~-g~--~~~~~-- 254 (474)
T 1wyu_B 187 --PEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERR---ILEISRLCKEA-GVQLYYDGANLNAIM-GW--ARPGD-- 254 (474)
T ss_dssp --TTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTT---HHHHHHHHHHH-TCEEEEEGGGGGGTT-TT--CCHHH--
T ss_pred --CCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCC---HHHHHHHHHHc-CCEEEEeCchhhhhc-cC--CCccc--
Confidence 34678999999999989999999998 589988 46 99999999999 999999999976543 11 11111
Q ss_pred CCCCceEEEeccccccccc----cceeEEEEcChhHHHHHHh-hh------------------hccccCCChHHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMT----GWRLGYIAGPKHFVAACNK-IQ------------------SQFTSGASSISQKAGVA 226 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~----g~~~g~l~~~~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~ 226 (352)
.+.++++.|+||.++.+ |+|+|++++++++++.+.. .. .....+.+...+.++..
T Consensus 255 --~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 332 (474)
T 1wyu_B 255 --MGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWA 332 (474)
T ss_dssp --HTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHH
T ss_pred --CCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHH
Confidence 24558899999999655 3689999999988776541 10 01122356667777777
Q ss_pred HhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE-EEeecCCccCCcccCCCCCCChHHHHHHHHHcc
Q 018665 227 ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY-LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 305 (352)
Q Consensus 227 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (352)
++... ..+++++..+++.++++++.+.|+++ |+++..+...+. +++.++.. .+..++.++|.++
T Consensus 333 ~l~~~--g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~- 397 (474)
T 1wyu_B 333 YIRTL--GLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQPPEG-----------FRALDLAKGLLEL- 397 (474)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBCSTT-----------CCHHHHHHHHHHT-
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEcCCC-----------CCHHHHHHHHHHC-
Confidence 76531 24667888889999999999999987 877743332221 44555322 1788999999977
Q ss_pred CEEeccCCCCC--CCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 306 QVALVPGDAFG--DDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 306 gi~i~~g~~~~--~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
||.+ ++..|. .++++||+++. +++++++++++|++++++
T Consensus 398 Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 398 GFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp TCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred Cccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 8875 444443 36799999998 899999999999998865
No 173
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=9.9e-28 Score=218.38 Aligned_cols=282 Identities=13% Similarity=0.133 Sum_probs=202.2
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH----HHhcCC
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 82 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~----~~~~g~ 82 (352)
.+...+++ +.++++++ .++.++++|+++++..++.+++++||+|+++.++|.++... ++..|.
T Consensus 58 ~~~~~~l~------~~la~~~g-------~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 124 (389)
T 3acz_A 58 NPTVEQFE------EMVCSIEG-------AAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGI 124 (389)
T ss_dssp CHHHHHHH------HHHHHHHT-------CSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTC
T ss_pred ChHHHHHH------HHHHHHhC-------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCC
Confidence 34445677 99999985 23677778888999999999999999999999999987765 578999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 162 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~ 162 (352)
+++.++. .|++++++++++++++|++++|+||+|.+.| +++|.++|+++ |+++|+|++|..+.+.
T Consensus 125 ~~~~v~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~-~~~livD~~~~~~~~~---- 189 (389)
T 3acz_A 125 EVDLIDT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHER-GARLVVDATFTSPCFL---- 189 (389)
T ss_dssp EEEEECT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECTTTCTTTC----
T ss_pred EEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcccccc----
Confidence 9999986 3899999999989999999999999999999 99999999999 9999999999865321
Q ss_pred cccccCCCCCCceEEEecccccccccccee-EEEEcCh-hHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHH
Q 018665 163 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 240 (352)
Q Consensus 163 ~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 240 (352)
.++. .+.++++.|++|.++.+|.|+ |++++++ ++++.+......++.+.++..+.++.+.++. ....+++
T Consensus 190 ~~~~-----~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~ 261 (389)
T 3acz_A 190 KPLE-----LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT---LPIRMQI 261 (389)
T ss_dssp CGGG-----TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHH
T ss_pred Cccc-----cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH---HHHHHHH
Confidence 1221 356699999999998788887 9999998 8988887766555666777777777777764 1222333
Q ss_pred HHHHHHHHHHHHHHHhccc--------------CCceecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 241 MVKAFRERRDFLVKSFGEL--------------EGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~--------------~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
..++...+.+.|++. |++.+..+ ..|.++.+.++ ..+++.+.| +
T Consensus 262 ----~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------------~~~~~~~~l-~ 322 (389)
T 3acz_A 262 ----HMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------------SFEAAKKLM-E 322 (389)
T ss_dssp ----HHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------------SHHHHHHHH-T
T ss_pred ----HHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------------CHHHHHHHH-H
Confidence 333444444444432 22322211 12344556654 233444444 4
Q ss_pred ccCEEecc---C------CCC----------------C-CCCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 304 KAQVALVP---G------DAF----------------G-DDTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 304 ~~gi~i~~---g------~~~----------------~-~~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
+.|+.+.+ | ..+ + .++++|+|++.. +.+++++.|.+++++
T Consensus 323 ~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~~ 388 (389)
T 3acz_A 323 HLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALEL 388 (389)
T ss_dssp TCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHTC
T ss_pred hCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 45777665 3 111 1 157999999983 666677777777653
No 174
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=1e-27 Score=220.34 Aligned_cols=290 Identities=12% Similarity=0.070 Sum_probs=202.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhc--CCeEEEecccCCCCc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIA--DATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~--g~~v~~i~~~~~~~~ 95 (352)
+.++++++ .++++|++++| ++++..++.+++++||+|+++.|+|.++.. .+... +..++.++++ .++
T Consensus 78 ~~la~~~g-----~~~~~i~~~sG-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~ 149 (417)
T 3n0l_A 78 ERCKKLFN-----CKFANVQPNSG-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDG 149 (417)
T ss_dssp HHHHHHHT-----CSEEECCCSSH-HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTS
T ss_pred HHHHHHhC-----CCCcceEeccH-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCC
Confidence 35566654 45566877766 799999999999999999999999987654 33343 3445555554 556
Q ss_pred ccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCccccccCCCCCC
Q 018665 96 LLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 96 ~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~~~~~~~~~ 173 (352)
.+|+++|+++++ +++++|++++++| |...+ +++|.++|+++ |+++|+|++++ +..+.+..+..+. .
T Consensus 150 ~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~~~~~------~ 217 (417)
T 3n0l_A 150 RIDYEKVREIAKKEKPKLIVCGASAY--ARVID---FAKFREIADEI-GAYLFADIAHIAGLVVAGEHPSPFP------Y 217 (417)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSCCCTT------T
T ss_pred CcCHHHHHHHHHhcCCeEEEECCccc--CccCC---HHHHHHHHHHc-CCEEEEECccchhhhhcccCCCccc------c
Confidence 799999999997 6899999888886 88888 99999999999 99999999964 3333332222211 2
Q ss_pred ceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhcc-ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 251 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (352)
.++++.|+||.+ +|.|.||++++ +++++.+....... ..+++...+.++..++... ..+.+++..+++++++++
T Consensus 218 ~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~ 293 (417)
T 3n0l_A 218 AHVVSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFN--LSDEWKVYAKQVRTNAQV 293 (417)
T ss_dssp CSEEEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHH
T ss_pred ceEEEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHH
Confidence 348999999988 56788999998 78888887654333 2344555555555555431 135567888889999999
Q ss_pred HHHHhcccCCceecC-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC------CCCeEEEE
Q 018665 252 LVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG------DDTCIRIS 324 (352)
Q Consensus 252 l~~~l~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~------~~~~iRi~ 324 (352)
+.+.|++. |+.+.. +..+.++|+.++... .+...+.+.|.+ .||.+.++..+. .+..+|++
T Consensus 294 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~~~~~ri~ 361 (417)
T 3n0l_A 294 LANVLMDR-KFKLVSDGTDNHLVLMSFLDRE----------FSGKDADLALGN-AGITANKNTVPGEIRSPFITSGLRLG 361 (417)
T ss_dssp HHHHHHHT-TCEEGGGSCSSSEEEEECTTSS----------SCHHHHHHHHHH-TTEECEECCCTTCCSCTTTCSEEEEE
T ss_pred HHHHHHhC-CceeccCCCCceEEEEEcccCC----------CCHHHHHHHHHH-cCeEEeccccCCCCcccCCCCeeEec
Confidence 99999884 887764 244556777775321 156777777765 599998654332 23569999
Q ss_pred eec------CHHHHHHHHHHHHHHHhhh
Q 018665 325 YAA------SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 325 ~~~------~~~~l~~~~~~l~~~~~~~ 346 (352)
+.. ++++++++++.|++++++.
T Consensus 362 ~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 362 TPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 863 5799999999999998764
No 175
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.96 E-value=6.3e-27 Score=215.26 Aligned_cols=303 Identities=19% Similarity=0.273 Sum_probs=214.4
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCC
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADA 82 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~ 82 (352)
|++..|..+++ .++++.++++++ . +++++++++++++..++.++ +++||+|+++.|+|.++...++..|.
T Consensus 34 ~~~~~g~~~l~--~~l~~~la~~~g-----~--~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~ 104 (418)
T 2c81_A 34 SGYWTGEESME--RKFAKAFADFNG-----V--PYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVLNVNA 104 (418)
T ss_dssp TSBCCSSCCHH--HHHHHHHHHHHT-----C--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTC
T ss_pred cCcccCCHHHH--HHHHHHHHHHhC-----C--CcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHHHHcCC
Confidence 55556644433 112266666664 2 25677888899999999999 88999999999999999999999999
Q ss_pred eEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCCCC
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPAT 161 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~~~ 161 (352)
+++.++++. .++.+|+++|++++++++++|+++ ||+|...+ +++|.++|+++ |+++|+|++|+.+. +++.
T Consensus 105 ~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~~~~~~-~~~li~D~a~~~~~~~~~~- 175 (418)
T 2c81_A 105 LPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSMAN---MDEINEIAQEH-NLFVIEDCAQSHGSVWNNQ- 175 (418)
T ss_dssp EEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCC---HHHHHHHHHHT-TCEEEEECTTCTTCEETTE-
T ss_pred EEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCccc---HHHHHHHHHHC-CCEEEEECcccccCccCCE-
Confidence 999999864 356799999999998888888754 57899888 99999999999 99999999999865 4332
Q ss_pred ccccccCCCCCCceEEEecc--ccccccccceeEEEEcC-hhHHHHHHhhhhccc------------cC-----------
Q 018665 162 HTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT------------SG----------- 215 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~------------~~----------- 215 (352)
.+... . .+.+.|+ +|.+|. | +.|+++++ +++++.+........ +.
T Consensus 176 --~~~~~----~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (418)
T 2c81_A 176 --RAGTI----G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGS 246 (418)
T ss_dssp --ETTSS----S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCC
T ss_pred --ecccc----c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCc
Confidence 11111 1 2677777 999985 7 99999984 788777765432211 00
Q ss_pred ---CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC-CCC-ce----EEEeecCCccCCccc
Q 018665 216 ---ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQG-AF----YLFIDFSTYYGSEAE 286 (352)
Q Consensus 216 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~-g~----~~~~~~~~~~~~~~~ 286 (352)
.+. .+.+.. +.. .+.+++..++.+++++++.+.|++++++.+.. +.+ +. .+.+.+++.. ..
T Consensus 247 ~~~~~~-~~aa~~--~~~----l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 316 (418)
T 2c81_A 247 NYCLSE-FQSAIL--LDQ----LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVK---FG 316 (418)
T ss_dssp BCCCCH-HHHHHH--HHH----HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGG---TT
T ss_pred CCCcCH-HHHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccc---cc
Confidence 111 111111 111 23356677777788889999999888888873 443 22 2226665300 00
Q ss_pred CCCCCCChHHHHHHHHHccCEE---eccCCCCC-----------------------------C-------CCeEEEEeec
Q 018665 287 GFGKIENSESLCRYLLDKAQVA---LVPGDAFG-----------------------------D-------DTCIRISYAA 327 (352)
Q Consensus 287 ~~~~~~~~~~~~~~l~~~~gi~---i~~g~~~~-----------------------------~-------~~~iRi~~~~ 327 (352)
+ .+..++.+.|.+++||. +.++.... . .+.+||+++.
T Consensus 317 ~----~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~ 392 (418)
T 2c81_A 317 G----LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAI 392 (418)
T ss_dssp T----CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGG
T ss_pred c----cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCc
Confidence 0 16789999998766899 77764210 0 1479999963
Q ss_pred ---CHHHHHHHHHHHHHHHhhhC
Q 018665 328 ---SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 328 ---~~~~l~~~~~~l~~~~~~~~ 347 (352)
+++|++++++.|++++++++
T Consensus 393 ~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 393 LLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp GGSCHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999988754
No 176
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=4.7e-27 Score=215.62 Aligned_cols=278 Identities=18% Similarity=0.205 Sum_probs=203.0
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADAT 83 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~ 83 (352)
+...+++ +.++++++ .+++++++|+++|+..++.+++++||+|+++.|.|.++...+ +..|.+
T Consensus 56 ~~~~~l~------~~la~~~g-------~~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 122 (412)
T 2cb1_A 56 PTAKALE------ERLKALEG-------ALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVT 122 (412)
T ss_dssp HHHHHHH------HHHHHHHT-------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCE
T ss_pred hHHHHHH------HHHHHHhC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence 3456677 99999885 358999999999999999999999999999999998776654 457999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.++. |+++|++++++++++|++++|+||+|.+.| +++|+++|+++ |+++|+|++|+.+.+.. .
T Consensus 123 ~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~-~~~li~D~~~~~~~~~~---~ 187 (412)
T 2cb1_A 123 VRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEEA-GVALVVDNTFGAAGALC---R 187 (412)
T ss_dssp EEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECGGGTTTTSC---C
T ss_pred EEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHHc-CCEEEEECCCccccccC---C
Confidence 998874 389999999989999999999999999999 99999999999 99999999998752111 1
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcCh----------------------------hHHHHHHhhh-hcccc
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK----------------------------HFVAACNKIQ-SQFTS 214 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~----------------------------~~~~~~~~~~-~~~~~ 214 (352)
+. ..+.++++.|++|.++.+|.|+|++++.+ ++.+.++... ...+.
T Consensus 188 ~~-----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~ 262 (412)
T 2cb1_A 188 PL-----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGM 262 (412)
T ss_dssp GG-----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCC
T ss_pred cc-----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCC
Confidence 11 13566999999999977888899887533 3344444432 22223
Q ss_pred CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec-CC----------------CCceEEEeec
Q 018665 215 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EP----------------QGAFYLFIDF 277 (352)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~----------------~~g~~~~~~~ 277 (352)
..++.....+...++. +....++..++.+.+.+.|.+.+++..+ .| ..+.++.+.+
T Consensus 263 ~~~~~~a~~~~~~l~~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~ 335 (412)
T 2cb1_A 263 ALSPFNAYLLFQGLET-------VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL 335 (412)
T ss_dssp CCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC
T ss_pred CCChHHhHHHHcCCch-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence 3455555444444432 3444555667888899999888887744 22 2344566666
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHccCEEeccCC---------CCC-----------------CCCeEEEEeec--CH
Q 018665 278 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD---------AFG-----------------DDTCIRISYAA--SL 329 (352)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~---------~~~-----------------~~~~iRi~~~~--~~ 329 (352)
+ +.+++.+.|.+ .||.+ .++ .+. .++.+|+|++. ++
T Consensus 336 -~-------------~~~~~~~~l~~-~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~ 399 (412)
T 2cb1_A 336 -G-------------DLERASRFLGA-IRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPL 399 (412)
T ss_dssp -S-------------SHHHHHHHHHH-CSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHH
T ss_pred -C-------------CHHHHHHHHHh-CCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHH
Confidence 3 45666666554 58888 663 221 15789999998 66
Q ss_pred HHHHHHHHHHHH
Q 018665 330 TTLQAAVERIKK 341 (352)
Q Consensus 330 ~~l~~~~~~l~~ 341 (352)
++++++.+.|++
T Consensus 400 ~~i~~l~~al~~ 411 (412)
T 2cb1_A 400 DLLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 788888877764
No 177
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.96 E-value=4.9e-28 Score=225.45 Aligned_cols=304 Identities=13% Similarity=0.089 Sum_probs=205.2
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEecCCCCCChHHHHHhcCC---------
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PGDEVIIPAPFWVSYPEMARIADA--------- 82 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~~~~vl~~~~~~~~~~~~~~~~g~--------- 82 (352)
..+++.+. ..+ ...++|++++|+++|++.+++.+.. ++++|++.++.|+++.......+.
T Consensus 102 ~~lae~l~~~~~--~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~ 179 (472)
T 3hmu_A 102 IALAQKLAELAP--GDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSG 179 (472)
T ss_dssp HHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC
T ss_pred HHHHHHHHHhCC--CCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccC
Confidence 55666655 332 3467999999999999999998764 467999999999987755543322
Q ss_pred ---eEEEecccC--C-CCcccC--------HHHHHhhcc----CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCC
Q 018665 83 ---TPVILPTRI--S-ENFLLD--------PKVLESKLT----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPR 143 (352)
Q Consensus 83 ---~v~~i~~~~--~-~~~~~d--------~~~l~~~l~----~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~ 143 (352)
.+..++.+. . .++ .| ++.|++.++ +++++|+++.+++++|... |.+++++|.++|+++ |
T Consensus 180 ~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~-g 257 (472)
T 3hmu_A 180 LIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKY-D 257 (472)
T ss_dssp CCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHT-T
T ss_pred CCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHc-C
Confidence 344555432 0 111 23 788888875 4567777777788888765 788999999999999 9
Q ss_pred EEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHh--hhhccccCCChHHH
Q 018665 144 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK--IQSQFTSGASSISQ 221 (352)
Q Consensus 144 ~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~--~~~~~~~~~~~~~~ 221 (352)
+++|+||+|.++.+.|.. ........ .++ +.++||.++.+|+|+|++++++++++.+.. .....+++.|++++
T Consensus 258 illI~DEv~~gfgr~G~~-~a~~~~~v-~pd---i~t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~ 332 (472)
T 3hmu_A 258 ILLIADEVICGFGRTGNW-FGTQTMGI-RPH---IMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAA 332 (472)
T ss_dssp CEEEEECTTTTTTTTSSS-CHHHHHTC-CCS---EEEECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHH
T ss_pred CEEEEEccccCCcccCcc-chhHHhCC-CCc---eeeechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHH
Confidence 999999999998776642 11111111 122 346889998445899999999999998832 13345678999999
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHH-HHHHHHHHHhcc---cCCceecCCCCceEEEeecCCccCCcccCCCC--CCChH
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFR-ERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK--IENSE 295 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~ 295 (352)
+++.++++.. +. +++.++++ ++.+++++.|++ ++.+..+.+.+. ++++++........ .+.. .....
T Consensus 333 aAa~aaL~~~----~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~-~~~i~~~~~~~~~~-~~~~~~~~~~~ 405 (472)
T 3hmu_A 333 AVALENLRIL----EE-ENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGM-MASIALTPNKASRA-KFASEPGTIGY 405 (472)
T ss_dssp HHHHHHHHHH----HH-TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETT-EEEEEECSCGGGTC-CBSSCTTHHHH
T ss_pred HHHHHHHHHH----HH-hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eEEEEEecCccccc-cccchhHHHHH
Confidence 9999998741 11 23444455 555555555543 445555554444 45566543110000 0000 00156
Q ss_pred HHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 296 SLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 296 ~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+.|+++ ||.+.+++ +++|++++. +++++++++++|+++++++
T Consensus 406 ~~~~~l~~~-Gv~v~~~g-----~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 406 ICRERCFAN-NLIMRHVG-----DRMIISPPLVITPAEIDEMFVRIRKSLDEA 452 (472)
T ss_dssp HHHHHHHHT-TBCCEEET-----TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 788888876 99998863 899999765 9999999999999998765
No 178
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=9.2e-28 Score=219.82 Aligned_cols=291 Identities=13% Similarity=0.080 Sum_probs=210.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH-H--HHhcC--CeEEEecccCCCCc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE-M--ARIAD--ATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~-~--~~~~g--~~v~~i~~~~~~~~ 95 (352)
+.++++++ .+++.++++ +|++++..++.++.++||+|+++.|+|..+.. . +...| .+++.+++++ .++
T Consensus 76 ~~la~~~g-----~~~~~i~~~-sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~ 148 (405)
T 2vi8_A 76 ERAKQLFG-----AEHANVQPH-SGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETH 148 (405)
T ss_dssp HHHHHHHT-----CSEEECCCS-SHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTC
T ss_pred HHHHHHhC-----CCceEEEec-CcHHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccC
Confidence 47777775 333334344 55999999999999999999999999988753 1 12223 4777777642 356
Q ss_pred ccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc-CCCCccccccCCCCCC
Q 018665 96 LLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY-APATHTSFASLPGMWE 173 (352)
Q Consensus 96 ~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~-~~~~~~~~~~~~~~~~ 173 (352)
.+|+++|++++++ +++++++ +++|. |...+ +++|.++|+++ |+++|+||+|+.... .+... ..+. .
T Consensus 149 ~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~---~~~~---~ 216 (405)
T 2vi8_A 149 VIDYDDVREKARLHRPKLIVA-AAAAY-PRIID---FAKFREIADEV-GAYLMVDMAHIAGLVAAGLHP---NPVP---Y 216 (405)
T ss_dssp SBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSC---CSTT---T
T ss_pred CcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCC---HHHHHHHHHHc-CCEEEEEccccccccccCcCC---Cccc---c
Confidence 7899999999975 7888776 44443 45556 89999999999 999999999984322 12111 1111 2
Q ss_pred ceEEEeccccccc-cccceeEEEEcChhHHHHHHhhhhccccC-CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 251 (352)
Q Consensus 174 ~~i~~~s~sK~~g-~~g~~~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (352)
..+++.|+||.++ +.| |++++++++++.+......+..+ ++.....++.++++.. ...+++++.+++++++++
T Consensus 217 ~di~~~s~sK~~~g~~g---G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~~~ 291 (405)
T 2vi8_A 217 AHFVTTTTHKTLRGPRG---GMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEA--LQDDFKAYAKRVVDNAKR 291 (405)
T ss_dssp CSEEEEESSSTTCCCSC---EEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeccccCCCCCC---eEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHH
Confidence 2388999999996 333 99999999988887664444433 3555555555666531 135778889999999999
Q ss_pred HHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC----C--CCCCeEEEE
Q 018665 252 LVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA----F--GDDTCIRIS 324 (352)
Q Consensus 252 l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~----~--~~~~~iRi~ 324 (352)
+.+.|+++ |+.+..+ ..++++|+.++... .+..++.+.|.++ ||.+.+|.. + ..++++|++
T Consensus 292 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~~~~iRis 359 (405)
T 2vi8_A 292 LASALQNE-GFTLVSGGTDNHLLLVDLRPQQ----------LTGKTAEKVLDEV-GITVNKNTIPYDPESPFVTSGIRIG 359 (405)
T ss_dssp HHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----------CCHHHHHHHHHHH-TEECEEECCTTCSSCTTTCSEEEEE
T ss_pred HHHHHHhC-CCeEecCCCCceEEEEEccCCC----------CCHHHHHHHHHHc-CceeccCcCccccCCCCCCCceEEe
Confidence 99999988 8888765 45778889886421 1677888888654 999998752 1 235689999
Q ss_pred eec------CHHHHHHHHHHHHHHHhhhC
Q 018665 325 YAA------SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 325 ~~~------~~~~l~~~~~~l~~~~~~~~ 347 (352)
++. +++++++++++|++++++..
T Consensus 360 ~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 360 TAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred eeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 984 79999999999999997764
No 179
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=2.8e-27 Score=215.67 Aligned_cols=292 Identities=17% Similarity=0.253 Sum_probs=213.7
Q ss_pred ccC-CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhc
Q 018665 3 FVR-VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 3 ~y~-~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
+|+ +.++..++| +.++++++ .+++++++|+++++..++.++ .++||+|+++.|+|.++...++..
T Consensus 50 ~~~~~~~~~~~l~------~~la~~~~-------~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~ 116 (391)
T 3dr4_A 50 WISSVGRFIVEFE------KAFADYCG-------VKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYC 116 (391)
T ss_dssp CCSSCSHHHHHHH------HHHHHHHT-------CSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHT
T ss_pred CccCCChHHHHHH------HHHHHHhC-------CCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHHHHC
Confidence 354 677788899 99999985 348899999999999999999 899999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCC
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAP 159 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~ 159 (352)
|.+++.++++. .++.+|+++|++++++++++|+ ++||||...+ +++|.++|+++ |+++|+|++|+... +.+
T Consensus 117 g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~---~~~i~~l~~~~-~~~li~D~a~~~g~~~~~ 188 (391)
T 3dr4_A 117 GATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQICD---MDPILEVARRH-NLLVIEDAAEAVGATYRG 188 (391)
T ss_dssp TCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHT-TCEEEEECTTCTTCEETT
T ss_pred CCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChhh---HHHHHHHHHHc-CCEEEEECcccccceECC
Confidence 99999999874 4467899999999998888877 5679999999 99999999999 99999999998522 221
Q ss_pred CCccccccCCCCCCceEEEeccc--cccccccceeEEEEcCh-hHHHHHHhhhhcc--------------ccCCChHHHH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGPK-HFVAACNKIQSQF--------------TSGASSISQK 222 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~--------------~~~~~~~~~~ 222 (352)
. ...... .+.+.|++ |.++ + .+.|+++.++ .+.+.+....... ....+.+..
T Consensus 189 ~---~~~~~~-----di~~~S~s~~K~l~-~-g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~a- 257 (391)
T 3dr4_A 189 K---KSGSLG-----DCATFSFFGNAIIT-T-GEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQA- 257 (391)
T ss_dssp E---ETTSSS-----SEEEEECBTTSSSC-C-BSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHH-
T ss_pred e---eecccC-----CEEEEECCCCCcCC-c-CCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHH-
Confidence 1 111111 26677765 8875 3 4678887654 5666665443211 122333322
Q ss_pred HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC------CCc-eEEEeecCCccCCcccCCCCCCChH
Q 018665 223 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP------QGA-FYLFIDFSTYYGSEAEGFGKIENSE 295 (352)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~------~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (352)
+..... .+.+++..++.+++.+++.+.|+++ ++.+..+ ..+ ..+++.+++.. + .+..
T Consensus 258 -a~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~----~~~~ 321 (391)
T 3dr4_A 258 -AIGLAQ-----LERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL-----S----TTRD 321 (391)
T ss_dssp -HHHHHH-----HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC-----S----SCHH
T ss_pred -HHHHHH-----HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc-----c----hhHH
Confidence 222222 3445667778888888999999988 7776644 122 23456665410 0 1688
Q ss_pred HHHHHHHHccCEEeccCCCC---C-----------------CCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 296 SLCRYLLDKAQVALVPGDAF---G-----------------DDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 296 ~~~~~l~~~~gi~i~~g~~~---~-----------------~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
++.+.|.++ ||.+.++... . ....+|+++.. +++|++++++.|++++
T Consensus 322 ~l~~~L~~~-GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 322 QVIKDLDAL-GIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp HHHHHHHHT-TCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHC-CCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 999998876 9999877411 0 02479999887 9999999999998764
No 180
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.96 E-value=3.3e-27 Score=219.21 Aligned_cols=313 Identities=13% Similarity=0.048 Sum_probs=219.8
Q ss_pred CCCCChhhhccchhhHHHHHHHH-hcCCCCCC---CcEEEeCChHHHHHHHHHHhcC--------CC-----CEEEecCC
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP---DQILVSNGAKQSILQAVLAVCS--------PG-----DEVIIPAP 68 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~---~~i~~~~g~~~a~~~~~~~l~~--------~~-----~~vl~~~~ 68 (352)
..++..+++ +.+.+++. ..|.+... ..+++++|+|+++..++.++.. +| ++|+++.
T Consensus 75 ~~~~~~~l~------~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~- 147 (452)
T 2dgk_A 75 EYPQSAAID------LRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP- 147 (452)
T ss_dssp TCHHHHHHH------HHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-
T ss_pred hChhHHHHH------HHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-
Confidence 344445555 77766666 55543221 2499999999999999888753 33 5899999
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh------CC
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK------HP 142 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~------~~ 142 (352)
.|..+...++..|.+++.++++. +++.+|+++|++++++++++|++++|+||||.+.| +++|.++|++ +
T Consensus 148 ~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~- 222 (452)
T 2dgk_A 148 VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGI- 222 (452)
T ss_dssp CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCC-
T ss_pred CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCC-
Confidence 99999999999999999999874 35779999999999989999999999999999999 8899999988 6
Q ss_pred CEEEEeccccccccc---CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh-HH-HHHHhhhhcc-----
Q 018665 143 RLLVLSDEIYEHIIY---APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FV-AACNKIQSQF----- 212 (352)
Q Consensus 143 ~~~livD~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~-~~~~~~~~~~----- 212 (352)
|+++++|++|+++.. .+.....+ . ..+-+.++.|++|.+ +++.++|+++++++ ++ +.+.....+.
T Consensus 223 ~~~l~vD~a~~~~~~~~~~~~~~~~~-~---~~~~d~~~~~~hK~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (452)
T 2dgk_A 223 DIDMHIDAASGGFLAPFVAPDIVWDF-R---LPRVKSISASGHKFG-LAPLGCGWVIWRDEEALPQELVFNVDYLGGQIG 297 (452)
T ss_dssp CCCEEEECTTGGGTHHHHCTTCCCST-T---STTEEEEEEETTTTT-CCCSSCEEEEESSGGGSCGGGCEEECCTTCCEE
T ss_pred CCcEEEEcccHHHHHHhhCccchhhc-C---CCCCcEEEECccccc-CCCCCeEEEEEcCHHHHHHHhccCccccCCCCC
Confidence 999999999987642 11111111 1 123456788899965 47889999998643 33 3331111110
Q ss_pred ----ccCC---ChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC----CCceEEEeecCCcc
Q 018665 213 ----TSGA---SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTYY 281 (352)
Q Consensus 213 ----~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~----~~g~~~~~~~~~~~ 281 (352)
..+. ....+.++...+. .+.++++.++..++++++.+.|+++++++++.+ ....++.+.+++..
T Consensus 298 ~~~~~~~r~~~~~~~~~aal~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~ 372 (452)
T 2dgk_A 298 TFAINFSRPAGQVIAQYYEFLRLG-----REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 372 (452)
T ss_dssp ECCSCCSCBCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC
T ss_pred CcccCCCChhHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcc
Confidence 1112 2233333333332 466788889999999999999999878888754 33344556665320
Q ss_pred CCcccCCCCCCChHHHHHHHHHccCEEeccCC---CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 282 GSEAEGFGKIENSESLCRYLLDKAQVALVPGD---AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~---~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
. .. .+..++.+.|.++ ||.+.... ......++|+++.. ++++++++++.|+++++.++.
T Consensus 373 ~---~~----~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 373 D---PG----YTLYDLSERLRLR-GWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp C---CS----CCHHHHHHHHHHT-TCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred c---cc----CCHHHHHHHHHhc-CCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 00 1458899999876 88654321 11124589999987 789999999999999877643
No 181
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=1.8e-27 Score=216.73 Aligned_cols=283 Identities=13% Similarity=0.097 Sum_probs=201.8
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADAT 83 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~ 83 (352)
+...++| +.+|++++ .++.++++|++++++.++. ++++||+|+++.|.|.+... .++..|.+
T Consensus 55 ~~~~~lr------~~la~~~g-------~~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 120 (393)
T 1n8p_A 55 PNRENLE------RAVAALEN-------AQYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVE 120 (393)
T ss_dssp HHHHHHH------HHHHHHTT-------CSEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSC
T ss_pred hhHHHHH------HHHHHHhC-------CCcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcE
Confidence 3445677 99999985 2356666777999999999 88999999999999986554 34667999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC---CEEEEecccccccccCCC
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP---RLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~---~~~livD~~~~~~~~~~~ 160 (352)
++.++++ | +++++++++++++|++++|+||+|.++| +++|.++|++++ |+++|+|++|+.+.+.
T Consensus 121 v~~v~~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-- 187 (393)
T 1n8p_A 121 TSFTNDL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-- 187 (393)
T ss_dssp CEEESSH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--
T ss_pred EEEeCCC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--
Confidence 9999864 6 8899999889999999999999999999 899999998873 7999999999976542
Q ss_pred CccccccCCCCCCceEEEecccccccccccee-EEEEcC-hhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 238 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 238 (352)
.... .+.++++.|+||.+|.+|+|+ |+++++ +++++.+......++..+++..+.++...++. +
T Consensus 188 ---~~~~----~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-------~ 253 (393)
T 1n8p_A 188 ---NPLN----FGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-------L 253 (393)
T ss_dssp ---CGGG----GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-------H
T ss_pred ---CHHH----cCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-------H
Confidence 1111 245699999999999789898 999884 78888887765545555676666665555543 3
Q ss_pred HHHHHHHHHHHHHHHHHhcccCC-ceec-CC---------------C--C-ceEEEeecCCccCCcccCCCCCCChHHHH
Q 018665 239 SKMVKAFRERRDFLVKSFGELEG-VKMS-EP---------------Q--G-AFYLFIDFSTYYGSEAEGFGKIENSESLC 298 (352)
Q Consensus 239 ~~~~~~~~~~~~~l~~~l~~~~g-~~~~-~~---------------~--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
....++..++.+.+.+.|++.+. +..+ .| . . +.++++.+++.. .+...+.
T Consensus 254 ~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----------~~~~~~l 323 (393)
T 1n8p_A 254 HLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----------EAASKFA 323 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----------HHHHHHH
Confidence 34445555666677777776543 3211 11 1 2 556778876420 0344555
Q ss_pred HHHHHccCEEeccCCCC----------------------C-CCCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 299 RYLLDKAQVALVPGDAF----------------------G-DDTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 299 ~~l~~~~gi~i~~g~~~----------------------~-~~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
+.|. ..++.+..|+.+ + .++.+|+|++. ++++++.+.+.|+++
T Consensus 324 ~~l~-~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 324 SSTR-LFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp HHCS-SSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred hhCC-cceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 5443 234444434211 1 14689999998 667888888888765
No 182
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.96 E-value=3.6e-28 Score=224.32 Aligned_cols=312 Identities=11% Similarity=0.085 Sum_probs=206.8
Q ss_pred cCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCChHHHH-Hhc
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMA-RIA 80 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~-~~~ 80 (352)
|++++...+++ +.+++++. ..++|++++|++++++.+++.+.. ++++|++.+++|+++...+ ...
T Consensus 89 ~~~~~~~~~l~------~~la~~~~------~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~ 156 (429)
T 3k28_A 89 GAPTEIENKLA------KLVIERVP------SIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKA 156 (429)
T ss_dssp SSCCHHHHHHH------HHHHHHST------TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSC
T ss_pred CCCCHHHHHHH------HHHHHhCC------CCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhc
Confidence 34455555666 77777652 578999999999999999988753 5678999999988655332 222
Q ss_pred CCeEEEecccCCCCcc------------cCHHHHHhhcc---CCeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCE
Q 018665 81 DATPVILPTRISENFL------------LDPKVLESKLT---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~------------~d~~~l~~~l~---~~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~ 144 (352)
|..+..+..+...+.. .|++.|+++++ +++++++++.++|++|... +.+++++|.++|++| |+
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~ 235 (429)
T 3k28_A 157 GSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQN-GA 235 (429)
T ss_dssp CTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHH-TC
T ss_pred CCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc-CC
Confidence 3222222221111100 17899998886 3566666666666777665 577899999999999 99
Q ss_pred EEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh---hccccCCChHHH
Q 018665 145 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQ 221 (352)
Q Consensus 145 ~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---~~~~~~~~~~~~ 221 (352)
++|+||+|.++ ..+.. ........ ...+.++||.+| +|+|+|++++++++++.+.... ...+++.|++.+
T Consensus 236 ~li~DEv~~g~-~~g~~-~~~~~~~~----~~di~t~sK~~~-~G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~ 308 (429)
T 3k28_A 236 LLIFDEVMTGF-RVAYN-CGQGYYGV----TPDLTCLGKVIG-GGLPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAM 308 (429)
T ss_dssp EEEEECTTTTT-TSSTT-HHHHHHTC----CCSEEEECGGGG-TTSCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHH
T ss_pred EEEEecccccc-ccCcc-hHHHHhCC----CCceehhhhhhc-CCCCeEEEEEcHHHHhhhccCCCccccCCCCCChHHH
Confidence 99999999987 55432 11111111 122457999998 6999999999999988775422 334577899999
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc----CCceecCCCCceEEEeecCCccCCcccC--CCCCCChH
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEG--FGKIENSE 295 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~ 295 (352)
.++.++++.. + ++..++++++++++.+.|+++ +.+....+ .|.++++.+.+.....+.. ........
T Consensus 309 aaa~aal~~~----~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (429)
T 3k28_A 309 AAGYETLVQL----T--PESYVEFERKAEMLEAGLRKAAEKHGIPHHINR-AGSMIGIFFTDEPVINYDAAKSSNLQFFA 381 (429)
T ss_dssp HHHHHHHHTC----C--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE-ETTEEEEESSSSCCCSHHHHTTSCHHHHH
T ss_pred HHHHHHHHHH----H--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEe-eccEEEEEEecCCcccccccccccHHHHH
Confidence 9999999862 2 456666777777777766653 33333333 3445666653311000000 00000246
Q ss_pred HHHHHHHHccCEEeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 296 SLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 296 ~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
++.+.|+++ ||.+.|++ .+.+|+++..+++++++++++|++++++++
T Consensus 382 ~~~~~l~~~-Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~l~~~l~~~~ 428 (429)
T 3k28_A 382 AYYREMVEQ-GVFLPPSQ----FEGLFLSTVHSDADIEATIAAAEIAMSKLK 428 (429)
T ss_dssp HHHHHHHHT-TEECCSST----TSCBCCCTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHC-CeEEecCC----CCCEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 788888876 99998863 467899877799999999999999998764
No 183
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=1.7e-27 Score=216.26 Aligned_cols=292 Identities=11% Similarity=0.117 Sum_probs=214.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH--HHHHhcC--CeEEEecccCCC---
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIAD--ATPVILPTRISE--- 93 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~--~~~~~~g--~~v~~i~~~~~~--- 93 (352)
+.++++++ .+ +.+++++|+|++++.++..+ ++||+|+++.+.|++.. ..++..| .+++.++.+..+
T Consensus 42 ~~l~~~~~-----~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~ 114 (379)
T 3ke3_A 42 SNLKTVYN-----AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTE 114 (379)
T ss_dssp HHHHHHHT-----CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCS
T ss_pred HHHHHHhC-----CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccccc
Confidence 55666654 33 78999999999999987655 68999999999987654 4556666 477788765311
Q ss_pred ---C-cccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccC
Q 018665 94 ---N-FLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168 (352)
Q Consensus 94 ---~-~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~ 168 (352)
. ..+|+++++++++ +++++|++++++|++|.++|.+++++|.++|+++ |+++|+|++++ . ..+..+..
T Consensus 115 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~-~~~li~D~~~~-g----~~~~~~~~- 187 (379)
T 3ke3_A 115 APKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSV-GGLLVIDCIAS-G----CVWLDMKE- 187 (379)
T ss_dssp SCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHT-TCEEEEECTTC-T----TCCCCHHH-
T ss_pred ccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHc-CCEEEEEeccc-C----Cccccccc-
Confidence 1 2479999999995 4889999999999999999999999999999999 99999999976 2 11222221
Q ss_pred CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh----------------------hccccCCChHHHHHHHH
Q 018665 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ----------------------SQFTSGASSISQKAGVA 226 (352)
Q Consensus 169 ~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~ 226 (352)
.+.++++.|++|.++ ++.++|++++++++++.+.... ..+.++++...+.++.+
T Consensus 188 ---~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~a 263 (379)
T 3ke3_A 188 ---LGIDVLISAPQKGWS-STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRD 263 (379)
T ss_dssp ---HTCSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHH
T ss_pred ---cCCCEEEecchhhcC-CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHH
Confidence 234588999999986 4457899999999888775411 01223678888888878
Q ss_pred HhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC---CceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 227 ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 227 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
+++.. ..+.++++.++.+++++++.+.|+++ |+++..+. ......+..++ ....+.+.|.+
T Consensus 264 al~~~--~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~L~~ 327 (379)
T 3ke3_A 264 AILEA--KEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER-------------DDMHKGSAFAE 327 (379)
T ss_dssp HHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC-------------HHHHSSHHHHH
T ss_pred HHHHH--HHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC-------------cchHHHHHHHH
Confidence 87641 12336788889999999999999988 87776443 23333333321 11122556665
Q ss_pred ccCEEeccCCCCCC-----CCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 304 KAQVALVPGDAFGD-----DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 304 ~~gi~i~~g~~~~~-----~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+ ||.+.+|..+.. .+.+|++++. +++|++++++.|+++++++.
T Consensus 328 ~-Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 328 A-GLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp T-TCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred C-CeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 4 999999875432 6799999986 88999999999999998764
No 184
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=1.7e-27 Score=219.08 Aligned_cols=289 Identities=14% Similarity=0.046 Sum_probs=196.9
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcC--CeEEEecccCCCCc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIAD--ATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g--~~v~~i~~~~~~~~ 95 (352)
+.++++++ .++++|++++ |++++..++.+++++||+|+++.|+|.++. ..+...| .....++.+ .++
T Consensus 83 ~~la~~~~-----~~~~~v~~~s-Gs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~ 154 (420)
T 3gbx_A 83 DRAKELFG-----ADYANVQPHS-GSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESG 154 (420)
T ss_dssp HHHHHHHT-----CSEEECCCSS-HHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC--TTC
T ss_pred HHHHHHhC-----CCCceeEecC-cHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccC
Confidence 34555554 4455665555 588999999999999999999999998743 2222333 444455544 556
Q ss_pred ccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc-cccCCCCccccccCCCCCC
Q 018665 96 LLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWE 173 (352)
Q Consensus 96 ~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~-~~~~~~~~~~~~~~~~~~~ 173 (352)
.+|+++|++++++ ++++|++++|+||+ ..+ +++|.++|+++ |+++|+||+|+. +.+.+.. .... ..
T Consensus 155 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~l~~~~-~~~li~De~~~~~~~~~~~~-~~~~-----~~ 222 (420)
T 3gbx_A 155 KIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMREIADSI-GAYLFVDMAHVAGLIAAGVY-PNPV-----PH 222 (420)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHHHHHHT-TCEEEEECTTTHHHHHTTSS-CCST-----TT
T ss_pred CcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHHHHHHc-CCEEEEECCcchhceecccC-Cccc-----cc
Confidence 6899999999976 58999998998864 667 89999999999 999999999763 3222221 1111 12
Q ss_pred ceEEEeccccccccccceeEEEEcCh---hHHHHHHhhhhcccc-CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHH
Q 018665 174 RTLTVNGFSKAFAMTGWRLGYIAGPK---HFVAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 249 (352)
Q Consensus 174 ~~i~~~s~sK~~g~~g~~~g~l~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (352)
.++++.|+||.++ |.+.|++++++ ++.+.+......+.. +++...+.++..++... ..+++++.++++++++
T Consensus 223 ~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~ 298 (420)
T 3gbx_A 223 AHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEA--MEPEFKVYQQQVAKNA 298 (420)
T ss_dssp SSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHH--HhHhHHHHHHHHHHHH
Confidence 4489999999984 44569999987 777777654333222 34444454545444331 2466788889999999
Q ss_pred HHHHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEecc-------CCCCCCCCeE
Q 018665 250 DFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP-------GDAFGDDTCI 321 (352)
Q Consensus 250 ~~l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~-------g~~~~~~~~i 321 (352)
+++.+.|++. |+.+..+ ..++++|+.++... .+...+.+.|.+ .||.+.+ +..+ .+..+
T Consensus 299 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~-~~~~i 365 (420)
T 3gbx_A 299 KAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN----------LTGKEADAALGR-ANITVNKNSVPNDPKSPF-VTSGI 365 (420)
T ss_dssp HHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----------CCHHHHHHHHHH-TTEECEEECCTTCSSCTT-TCSEE
T ss_pred HHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC----------CCHHHHHHHHHH-CCcEeccccCCCCccccC-CCcce
Confidence 9999999885 8887754 45667888775421 156677777764 5999988 3333 24569
Q ss_pred EEEeec------CHHHHHHHHHHHHHHHhhh
Q 018665 322 RISYAA------SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 322 Ri~~~~------~~~~l~~~~~~l~~~~~~~ 346 (352)
|++++. ++++++++++.|++++++.
T Consensus 366 Ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 366 RIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp EEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred EEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 999974 4799999999999998764
No 185
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.96 E-value=8e-28 Score=223.04 Aligned_cols=289 Identities=13% Similarity=0.134 Sum_probs=203.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc---C-----------CCCEEEecCCCCCChHHHH-H-------
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC---S-----------PGDEVIIPAPFWVSYPEMA-R------- 78 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~---~-----------~~~~vl~~~~~~~~~~~~~-~------- 78 (352)
+.+++++ + ....++|++++|+++|++.+++.+. + ++++|++.+|.|+++...+ .
T Consensus 108 ~~la~~~---~-~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~ 183 (449)
T 2cjg_A 108 ETFARVL---G-DPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPT 183 (449)
T ss_dssp HHHHHHH---C-CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHH
T ss_pred HHHHHhc---C-CCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchh
Confidence 5555554 2 1357899999999999999987543 2 2789999999998765422 1
Q ss_pred -hcCC-----eEEEecccCCCCc--------ccCHHHHHhhcc---CCeeEEEEcCCCCCcc-cCCCHHHHHHHHHHHHh
Q 018665 79 -IADA-----TPVILPTRISENF--------LLDPKVLESKLT---EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAK 140 (352)
Q Consensus 79 -~~g~-----~v~~i~~~~~~~~--------~~d~~~l~~~l~---~~~~~i~i~~p~nptG-~~~~~~~l~~l~~~~~~ 140 (352)
..+. ++..+|.++.... ..++++|++.++ +++++|+++.++||+| ..++.+++++|.++|++
T Consensus 184 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 263 (449)
T 2cjg_A 184 ITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDE 263 (449)
T ss_dssp HHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHH
T ss_pred hcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHH
Confidence 1222 5566665420011 246677888884 5677777666679999 58899999999999999
Q ss_pred CCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHH-----HhhhhccccC
Q 018665 141 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-----NKIQSQFTSG 215 (352)
Q Consensus 141 ~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~-----~~~~~~~~~~ 215 (352)
+ |+++|+||+|+++.+.|.. ..+..... .++ +.|+||.+ |+|++++++++++.+ .......+++
T Consensus 264 ~-g~lli~DEv~~g~g~~g~~-~~~~~~~~-~~d---i~t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~ 332 (449)
T 2cjg_A 264 F-DALLIFDEVQTGCGLTGTA-WAYQQLDV-APD---IVAFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWG 332 (449)
T ss_dssp T-TCEEEEECTTTTTTTTSSS-STHHHHTC-CCS---EEEECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSS
T ss_pred C-CcEEEEeccccCCCccCcc-eeecccCC-Cce---EEEecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCC
Confidence 9 9999999999988776642 12111111 122 34788987 689999999887752 2223335677
Q ss_pred CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc----CC-ceecCCCCceEEEeecCCccCCcccCCCC
Q 018665 216 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGK 290 (352)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 290 (352)
.|++.+.++.++++.. .+ +++.++++++++++.+.|+++ +. +....+.+. ++++++++..
T Consensus 333 ~n~~~~~aa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~-~~~~~~~~~~--------- 397 (449)
T 2cjg_A 333 GNLTDMVRARRILEVI---EA--EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGL-MCAFSLPTTA--------- 397 (449)
T ss_dssp SCHHHHHHHHHHHHHH---HH--HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETT-EEEEECSSHH---------
T ss_pred CCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccE-EEEEEECChH---------
Confidence 8999999999998741 11 345667777777888777653 44 545554444 4667876421
Q ss_pred CCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 291 IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 291 ~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
+..++.+.|.++ ||.+.+++ ++++|++++. +++++++++++|+++++++
T Consensus 398 --~~~~~~~~l~~~-Gv~v~~~g----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 398 --DRDELIRQLWQR-AVIVLPAG----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp --HHHHHHHHHHHT-TEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHC-CeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 467899999865 99999863 5899998765 9999999999999998764
No 186
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.96 E-value=1.8e-27 Score=217.58 Aligned_cols=280 Identities=12% Similarity=0.037 Sum_probs=200.5
Q ss_pred HHHHHHHHhcCCCCCCCcEEE-eCChHHHHHHHHHHhcCCCCEEEecCCCCCC-hHHHHHhc--CCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILV-SNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMARIA--DATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~-~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~-~~~~~~~~--g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ .+ .+++|++ |+|+++++..++.+++++| .+.+..+.|.. ....+... |.+++.++++ .+..
T Consensus 85 ~~la~~~g---~~-~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~ 157 (398)
T 2fyf_A 85 SGLAELFS---LP-DGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSA 157 (398)
T ss_dssp HHHHHHTT---CC-TTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCC
T ss_pred HHHHHHhC---CC-CCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCC
Confidence 66666664 32 2468998 9999999999999998876 23333333321 12245555 8888888876 2322
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
.+. .+++++++|++++|+||||.++|.+ +|.++ + |+++|+|++|+.+.. +..+. +.++
T Consensus 158 ~~~-----~i~~~~~~v~~~~~~nptG~~~~~~---~i~~~---~-~~~vivD~a~~~~~~----~~~~~------~~di 215 (398)
T 2fyf_A 158 PEP-----QTDPSVDVIAWAHNETSTGVAVAVR---RPEGS---D-DALVVIDATSGAGGL----PVDIA------ETDA 215 (398)
T ss_dssp CCC-----CCCTTCSEEEEESEETTTTEECCCC---CCTTC---C--CEEEEECTTTTTTS----CCCGG------GCSE
T ss_pred CCc-----cccCCCCEEEEeCcCCCcceecchH---Hhhhh---c-CCeEEEEeccccCCc----ccCcc------cCcE
Confidence 332 2566899999999999999999944 44443 8 999999999986421 11111 2348
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHhhh---------------------hccccCCChHHHHHHHHHhcccCCCh
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGG 235 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~ 235 (352)
++.|+||.+|++| ++|++++++++++.+.+.. .....+++...+.++.++++. ..
T Consensus 216 ~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~---~~ 291 (398)
T 2fyf_A 216 YYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDW---LV 291 (398)
T ss_dssp EEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH---HH
T ss_pred EEEecCcccCCCC-ceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HH
Confidence 8999999998664 6999999999888774321 112245667777777777764 12
Q ss_pred HH--HHHHHHHHHHHHHHHHHHhcccCCceecC--C--CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEe
Q 018665 236 EV--VSKMVKAFRERRDFLVKSFGELEGVKMSE--P--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 309 (352)
Q Consensus 236 ~~--~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i 309 (352)
+. +++..++++++++++.+.|++++|+++.. + .+++++++++|+.. +..++.+.|.++ ||.+
T Consensus 292 ~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~-gI~v 359 (398)
T 2fyf_A 292 GNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV-----------DAGTVAKILRAN-GIVD 359 (398)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS-----------CHHHHHHHHHHT-TCBC
T ss_pred HccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC-----------CHHHHHHHHHHC-CcEE
Confidence 22 78888999999999999999888888773 4 34547888886532 788999999977 9999
Q ss_pred ccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 310 VPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 310 ~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
.+|.....++++||+++. +++|++++++.|++++++
T Consensus 360 ~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 360 TEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp CSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred ecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 886332235799999995 899999999999998865
No 187
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.96 E-value=1.6e-28 Score=227.12 Aligned_cols=290 Identities=13% Similarity=0.078 Sum_probs=203.5
Q ss_pred CCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeE
Q 018665 5 RVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP 84 (352)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v 84 (352)
.+.....+++ +.+|+ ++ .+ +++++++|+++++..++.+++++||+|+++.++|.++...+...|.++
T Consensus 54 ~~~~~~~~~~------~~la~-~g-----~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~ 120 (446)
T 2x3l_A 54 HPEEVILKSM------KQVEK-HS-----DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEG 120 (446)
T ss_dssp SCSSHHHHHH------HHHCS-CT-----TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCE
T ss_pred CcchHHHHHH------HHHHh-cC-----CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeE
Confidence 3444555667 88887 75 33 789999999999999999999999999999999999999999999999
Q ss_pred EEecccCCCC----cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccc-cccCC
Q 018665 85 VILPTRISEN----FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAP 159 (352)
Q Consensus 85 ~~i~~~~~~~----~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~-~~~~~ 159 (352)
++++...+.+ +.+|++.| +.++++++++++ +|++|.+.| +++|+++|+++ |+++|+||+|+. +.+.+
T Consensus 121 ~~v~~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~-~~~livDea~~~~~~f~~ 192 (446)
T 2x3l_A 121 HFIETHQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQL-NIPVLIDEAHGAHFGLQG 192 (446)
T ss_dssp EECEEEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHT-TCCEEEECTTCTTTTSTT
T ss_pred EEEeCeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhc-CCeEEEcchhhhhhccCC
Confidence 9999832232 45788887 456789999988 555999999 89999999999 999999999986 33433
Q ss_pred CCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHH--HHHhhh-hccccCCChHHHHHHHHHhcccCCChH
Q 018665 160 ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA--ACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGE 236 (352)
Q Consensus 160 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (352)
. +.+..... ..+++.|+||.++ ++.++|++++++++++ .+.... ...+.+++.....++.++++.. ...
T Consensus 193 ~-~~~~~~~g----~Di~~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l--~~~ 264 (446)
T 2x3l_A 193 F-PDSTLNYQ----ADYVVQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFY--KTY 264 (446)
T ss_dssp S-CCCGGGGT----CSEEEECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH--HHC
T ss_pred C-CCChHHcC----CCEEEECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH--HHh
Confidence 3 23333222 3499999999765 4456899998877654 333221 2233455555554444443320 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec-cCCCC
Q 018665 237 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV-PGDAF 315 (352)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~-~g~~~ 315 (352)
..+++.++.+++.+.+++. ++.+..+..+.++++.+++. ++.++.+.|.++ ||.+. +|
T Consensus 265 g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~------------~~~~l~~~L~~~-GI~v~~~g--- 323 (446)
T 2x3l_A 265 DSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGF------------TGHDIQNWFMNA-HIYLELAD--- 323 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTS------------CHHHHHHHHHHT-TEEESEEC---
T ss_pred CHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCc------------CHHHHHHHHHHC-CCEEEecC---
Confidence 1122444555555555554 66666555555688887632 788999999887 99987 43
Q ss_pred CCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 316 GDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 316 ~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
.+++|++++. +++++ ++++.|+++++.+.
T Consensus 324 --~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~~ 354 (446)
T 2x3l_A 324 --DYQALAILPLWHHDDTY-LFDSLLRKIEDMIL 354 (446)
T ss_dssp --SSCEEEECCCCCTTCCC-CHHHHHHHHHTCCC
T ss_pred --CCEEEEEeecCCCHHHH-HHHHHHHHHHHhhc
Confidence 4689999987 88899 99999999987764
No 188
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=1.5e-27 Score=222.93 Aligned_cols=295 Identities=14% Similarity=0.113 Sum_probs=211.2
Q ss_pred HHHHHHHH-hcCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH--------HHhcC--CeEEEe
Q 018665 21 QQFVINLK-ENGLSYTP--DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM--------ARIAD--ATPVIL 87 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~--~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~--------~~~~g--~~v~~i 87 (352)
+.+.+++. .+|.+.+. .+|++++|+ +++..++.+++++||+|+++++.|.++... +...| .+++.+
T Consensus 93 ~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~ 171 (483)
T 1rv3_A 93 TLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY 171 (483)
T ss_dssp HHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE
T ss_pred HHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEEC
Confidence 66666666 55654221 347777777 888888999999999999999998887642 22333 445555
Q ss_pred cccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCcccc
Q 018665 88 PTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSF 165 (352)
Q Consensus 88 ~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~ 165 (352)
++++ .++.+|+++|+++++ +++++|++ +++|++ .+.| +++|.++|+++ |+++|+|++|+ ++.+.+....++
T Consensus 172 ~~~~-~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~-g~~livD~ah~~g~~~~~~~~~p~ 244 (483)
T 1rv3_A 172 KVNP-DTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLD---YGRLRKIADEN-GAYLMADMAHISGLVVAGVVPSPF 244 (483)
T ss_dssp CBCT-TTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHHHTSSCCGG
T ss_pred cccc-CCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHc-CCEEEEEccchhcccccCCCCCCC
Confidence 4443 456799999999998 78999998 888888 8888 99999999999 99999999987 333333222222
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChh---------------HHHHHHhhhh-ccccCCChHHHHHHHHHhc
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH---------------FVAACNKIQS-QFTSGASSISQKAGVAALG 229 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~---------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 229 (352)
. ..++++.|+||++ .|+|.|+++++++ +.+.+..... ....+++...+.++..++.
T Consensus 245 ~------~~div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~ 316 (483)
T 1rv3_A 245 E------HCHVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALK 316 (483)
T ss_dssp G------TCSEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHH
T ss_pred C------CCcEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHH
Confidence 1 2348899999987 5678899998874 3334433211 1133455555666666665
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC-CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
.. ...++++..++++++++++.+.|+++ |+.+..+. ..+++++.++... .+..++.+.|.+ .||.
T Consensus 317 ~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~g----------~~~~~~~~~L~~-~gI~ 382 (483)
T 1rv3_A 317 QA--MTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSKG----------TDGGRAEKVLEA-CSIA 382 (483)
T ss_dssp HH--TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGGT----------CCHHHHHHHHHH-TTEE
T ss_pred HH--hChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCCC----------CCHHHHHHHHHh-CCcE
Confidence 42 13567888999999999999999988 88887653 3456778875321 167778777665 5999
Q ss_pred ec----cCCCCC-CCCeEEEEeec--C----HHHHHHHHHHHHHHHhh
Q 018665 309 LV----PGDAFG-DDTCIRISYAA--S----LTTLQAAVERIKKGLLT 345 (352)
Q Consensus 309 i~----~g~~~~-~~~~iRi~~~~--~----~~~l~~~~~~l~~~~~~ 345 (352)
+. ||..+. .++++||+++. + ++|++++++.|+++++.
T Consensus 383 v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 383 CNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp CEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 98 876321 35799999986 5 89999999999998875
No 189
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.96 E-value=5.4e-27 Score=214.41 Aligned_cols=278 Identities=10% Similarity=0.068 Sum_probs=195.7
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~~~~~ 96 (352)
+.+|++++ .++.++++|+++|++.++.+++++||+|+++.+.|.+....+ +..|+++.+++.+
T Consensus 89 ~~lA~l~g-------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~------ 155 (415)
T 2fq6_A 89 QAMCELEG-------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL------ 155 (415)
T ss_dssp HHHHHHHT-------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT------
T ss_pred HHHHHHhC-------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC------
Confidence 99999985 346777799999999999999999999999999999887654 4679999999753
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh--CCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~--~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
|+++|++++++++++|++++|+||+|.++| +++|+++|++ + |+++|+|++|+.... ..++ . .+.
T Consensus 156 -d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~-g~~livD~a~a~~~~----~~p~-~----~g~ 221 (415)
T 2fq6_A 156 -IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVP-DAIIMIDNTWAAGVL----FKAL-D----FGI 221 (415)
T ss_dssp -CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCT-TCEEEEECTTTTTTS----SCGG-G----GTC
T ss_pred -CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcC-CCEEEEECCCccccc----CCcc-c----cCC
Confidence 789999999999999999999999999999 9999999999 9 999999999875321 1122 1 345
Q ss_pred eEEEeccccccccccce-eEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH
Q 018665 175 TLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 253 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (352)
++++.|++|.+|.+|.+ .|++++++++++.+.......+...++.....+...+ +.+....++..++...+.
T Consensus 222 Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-------~~l~~r~~~~~~n~~~l~ 294 (415)
T 2fq6_A 222 DVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGL-------RTLGVRLRQHHESSLKVA 294 (415)
T ss_dssp SEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHH
Confidence 69999999999866644 6999999888888876654444445555444443333 334455555666777777
Q ss_pred HHhcccCCceec-CC----------------CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCC--
Q 018665 254 KSFGELEGVKMS-EP----------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA-- 314 (352)
Q Consensus 254 ~~l~~~~g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~-- 314 (352)
+.|++.|.+..+ .| ..+.++++.+++..+ ..+...+.+.|. ..++.+..|+.
T Consensus 295 ~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~--------~~~~~~~l~~l~-~~~~a~s~G~~~s 365 (415)
T 2fq6_A 295 EWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLN--------NEELANYLDNFS-LFSMAYSWGGYES 365 (415)
T ss_dssp HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCC--------HHHHHHHHTTCS-SCEECSCCCSSSC
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCC--------HHHHHHHHHhCC-cCeEeccCCCCce
Confidence 777765544321 11 135567777764200 002334444332 23455544422
Q ss_pred ------------------CC-CCCeEEEEeec--CHHHHHHHHHHHHH
Q 018665 315 ------------------FG-DDTCIRISYAA--SLTTLQAAVERIKK 341 (352)
Q Consensus 315 ------------------~~-~~~~iRi~~~~--~~~~l~~~~~~l~~ 341 (352)
.+ .++.+|+|++. ++++++.+.+.|++
T Consensus 366 ~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 366 LILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp EEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred eEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 11 24689999998 55667777666653
No 190
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.96 E-value=7.9e-27 Score=214.00 Aligned_cols=282 Identities=15% Similarity=0.107 Sum_probs=200.2
Q ss_pred CCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH----HHHhcCCe
Q 018665 8 QGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADAT 83 (352)
Q Consensus 8 ~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~----~~~~~g~~ 83 (352)
+...+++ +.+|++++ .+..++++++++|+..++.+++++||+|+++.++|.++.. .++..|.+
T Consensus 82 p~~~~le------~~lA~l~g-------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 148 (430)
T 3ri6_A 82 PTVEDLE------QRLKNLTG-------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIE 148 (430)
T ss_dssp HHHHHHH------HHHHHHHT-------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCE
T ss_pred HHHHHHH------HHHHHHHC-------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence 4445566 99999885 3446777788899999999999999999999999998887 66789999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
++.++.+ |++++++++++++++|++++|+||+|.+.+ +++|+++|+++ |+++|+|++++.... ..
T Consensus 149 ~~~v~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~-g~~livD~a~~~~~~----~~ 213 (430)
T 3ri6_A 149 VRFVDVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAK-GIPLVVDTTMTPPYL----LE 213 (430)
T ss_dssp EEEECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTT-TCCEEEECTTSCTTT----CC
T ss_pred EEEeCCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCccccc----CC
Confidence 9999864 899999999999999999999999999999 88999999999 999999999875321 11
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEc---ChhH------------------HHHHHh-hhhccccCCChHHH
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHF------------------VAACNK-IQSQFTSGASSISQ 221 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~---~~~~------------------~~~~~~-~~~~~~~~~~~~~~ 221 (352)
+. ..+.++++.|++|.+|.+|..+|.+++ +..+ +..+.. .....+...+++..
T Consensus 214 ~~-----~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a 288 (430)
T 3ri6_A 214 AK-----RLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNA 288 (430)
T ss_dssp GG-----GGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHH
T ss_pred hH-----HcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHH
Confidence 11 134569999999999755555454443 2222 222221 12223334455444
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceec-CCC----------------CceEEEeecCCccCCc
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQ----------------GAFYLFIDFSTYYGSE 284 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~----------------~g~~~~~~~~~~~~~~ 284 (352)
..+... .+.+....++..++...+.+.|++.|++..+ .|. +|+++++++++..
T Consensus 289 ~l~l~~-------l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~--- 358 (430)
T 3ri6_A 289 YLQSLG-------LETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKE--- 358 (430)
T ss_dssp HHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHH---
T ss_pred HHHHhh-------hhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHH---
Confidence 433333 3445666677788888999999988887643 333 4547899987421
Q ss_pred ccCCCCCCChHHHHHHHHHccCEEeccCCCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHH
Q 018665 285 AEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----------------------DDTCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 285 ~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
++.++.+.|. -.++.+.+|+.+. .+++||||++. |+.+.+++.|+.
T Consensus 359 --------~~~~~~~~l~-~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~ 427 (430)
T 3ri6_A 359 --------ASYRFMDALK-LIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQ 427 (430)
T ss_dssp --------HHHHHHHHCS-SSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHH
T ss_pred --------HHHHHHHhCC-cceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHH
Confidence 4566666654 3466677776543 24689999998 344455555555
Q ss_pred HH
Q 018665 342 GL 343 (352)
Q Consensus 342 ~~ 343 (352)
++
T Consensus 428 al 429 (430)
T 3ri6_A 428 AL 429 (430)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 191
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.96 E-value=1e-26 Score=212.13 Aligned_cols=302 Identities=18% Similarity=0.159 Sum_probs=209.3
Q ss_pred cCCCCC--ChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhc
Q 018665 4 VRVSQG--TLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIA 80 (352)
Q Consensus 4 y~~~~~--~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~ 80 (352)
|.+..| ..++| +.+|++++ .+++++++|+++++..++.++ .++||+|+++.|+|.++...++..
T Consensus 26 ~~~~~g~~~~~l~------~~la~~~~-------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~~~ 92 (394)
T 1o69_A 26 YIAPLGEFVNRFE------QSVKDYSK-------SENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYL 92 (394)
T ss_dssp TTSCTTHHHHHHH------HHHHHHHC-------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHT
T ss_pred CccCCChHHHHHH------HHHHHHhC-------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHc
Confidence 555456 77888 99999985 379999999999999999999 899999999999999999999999
Q ss_pred CCeEEEecccCCCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccc
Q 018665 81 DATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HII 156 (352)
Q Consensus 81 g~~v~~i~~~~~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~ 156 (352)
|.+++.++++ .++.+|+++|++++++ ++++|++++ |+|...+ +++|.++|+++ |+++|+|++|+ ++.
T Consensus 93 g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~ 163 (394)
T 1o69_A 93 KAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKEN-DIVLIEDAAEALGSF 163 (394)
T ss_dssp TCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHT-TCEEEEECTTCTTCE
T ss_pred CCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHc-CCEEEEECcCcccce
Confidence 9999999987 4567899999999876 688888875 8998888 99999999999 99999999998 554
Q ss_pred cCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhccccC--------------CChHHH
Q 018665 157 YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSG--------------ASSISQ 221 (352)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~~~~--------------~~~~~~ 221 (352)
+.+.. ...+ .+.++...|.+|.+ +|.++|+++++ +++++.+.......... ++....
T Consensus 164 ~~~~~---~~~~---~~~~~~s~s~~K~l--~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a 235 (394)
T 1o69_A 164 YKNKA---LGTF---GEFGVYSYNGNKII--TTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLG 235 (394)
T ss_dssp ETTEE---TTSS---SSEEEEECCTTSSS--CCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHH
T ss_pred eCCcc---cccc---cCcEEEEEeCCccC--CCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHH
Confidence 43321 1111 12223344446766 45689999995 78888887653222111 222222
Q ss_pred HHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC----Cce-EEEeecCCcc----------CCccc
Q 018665 222 KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAF-YLFIDFSTYY----------GSEAE 286 (352)
Q Consensus 222 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~----~g~-~~~~~~~~~~----------~~~~~ 286 (352)
.++...+ +++++..++.+++++++.+.|+++ +.+..+. .++ ++++.++... +....
T Consensus 236 a~~l~~l-------~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 306 (394)
T 1o69_A 236 AIGVAQM-------EVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQK 306 (394)
T ss_dssp HHHHHHH-------TTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCC
T ss_pred HHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhcccccccccccccc
Confidence 2222222 335667788888999999999875 5554332 233 3556665310 00000
Q ss_pred CCCCCCChHHHHHHHHHccCEEeccCCCCC------CC--------------CeEEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 287 GFGKIENSESLCRYLLDKAQVALVPGDAFG------DD--------------TCIRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 287 ~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~------~~--------------~~iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
+.....+..++.+.|.++ ||.+.++..+. .. ..+|+.... +++|++++++.|++++.
T Consensus 307 ~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 307 NITLHPKISKLIEDLKNK-QIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CCCCCHHHHHHHHHHHHT-TCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ccccccCHHHHHHHHHHc-CCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 000000467888888865 99999884320 00 234444444 89999999999998875
Q ss_pred h
Q 018665 345 T 345 (352)
Q Consensus 345 ~ 345 (352)
.
T Consensus 386 ~ 386 (394)
T 1o69_A 386 A 386 (394)
T ss_dssp -
T ss_pred c
Confidence 3
No 192
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.95 E-value=1.7e-26 Score=208.80 Aligned_cols=287 Identities=16% Similarity=0.225 Sum_probs=212.6
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
+|++.++..+++ +.++++++ .+++++++|+++|+..++.++ .++||+|+++.++|.++...++..|
T Consensus 30 ~~~~~~~~~~l~------~~la~~~~-------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~~~G 96 (367)
T 3nyt_A 30 QYILGPEVTELE------DRLADFVG-------AKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLG 96 (367)
T ss_dssp CCSSCHHHHHHH------HHHHHHHT-------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTT
T ss_pred CccCChHHHHHH------HHHHHHhC-------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHcC
Confidence 466677778888 99999985 348999999999999999999 8899999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc-ccCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI-IYAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~-~~~~~ 160 (352)
.+++.+++++ +++.+|++++++++++++++|+ |+||+|...+ +++|.++|+++ |+++|+|++|+.. .+.+.
T Consensus 97 ~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~-~~~li~D~a~~~g~~~~~~ 168 (367)
T 3nyt_A 97 AKPVYVDIDP-RTYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKY-GIPVIEDAAQSFGASYKGK 168 (367)
T ss_dssp CEEEEECBCT-TTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHT-TCCBEEECTTTTTCEETTE
T ss_pred CEEEEEecCC-ccCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHc-CCEEEEECccccCCeECCe
Confidence 9999999875 3367899999999988888877 7889999988 99999999999 9999999999742 22221
Q ss_pred CccccccCCCCCCceEEEecc--ccccccccceeEEEEc-ChhHHHHHHhhhhc------------cccCCChHHHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ------------FTSGASSISQKAGV 225 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 225 (352)
.+... + ++++.|| +|.+|..|. .|+++. ++++.+.+...... ++...+.+..+++.
T Consensus 169 ---~~~~~----~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~ 239 (367)
T 3nyt_A 169 ---RSCNL----S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILL 239 (367)
T ss_dssp ---ETTSS----S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHH
T ss_pred ---eccCC----C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHH
Confidence 11111 1 4888886 899984475 788887 56777777654331 23456666665555
Q ss_pred HHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC-C---ce-EEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 226 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-G---AF-YLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~---g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
..++. +++..++.+++.+++.+.|+++ ++.+.... . .+ .+.+.++ +.+++.+.
T Consensus 240 ~~l~~-------~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~ 297 (367)
T 3nyt_A 240 PKLEI-------FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD--------------NRESVQAS 297 (367)
T ss_dssp HHHHT-------HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS--------------SHHHHHHH
T ss_pred HHHHH-------HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC--------------CHHHHHHH
Confidence 55542 3555666677778888888876 44443221 1 11 1223332 57788888
Q ss_pred HHHccCEEeccCCCC--------C--C----------CCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 301 LLDKAQVALVPGDAF--------G--D----------DTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 301 l~~~~gi~i~~g~~~--------~--~----------~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
|.++ ||.+.++... . . ...+|+++.. +++|+++.++.|++.
T Consensus 298 L~~~-GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 298 LKAA-GVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHH-TCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHC-CCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 8876 8988765420 0 0 1368999887 999999999988754
No 193
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.95 E-value=1.3e-26 Score=209.99 Aligned_cols=294 Identities=17% Similarity=0.204 Sum_probs=211.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIAD 81 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g 81 (352)
+|++.++..++| +.++++++ .+++++++|+++|+..++.++ .++||+|+++.++|.++...++..|
T Consensus 31 ~~~~~~~~~~l~------~~la~~~~-------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g 97 (373)
T 3frk_A 31 WFILGDEDKKFE------QEFADYCN-------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVSYTG 97 (373)
T ss_dssp CCSSSHHHHHHH------HHHHHHHT-------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHHHHS
T ss_pred CccCCchHHHHH------HHHHHHhC-------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcC
Confidence 466777788899 99999985 358999999999999999999 8999999999999999999999999
Q ss_pred CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCCC
Q 018665 82 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPA 160 (352)
Q Consensus 82 ~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~~ 160 (352)
.+++.+++++ .++.+|+++|++++++++++|+ |+||+|...+ +++|.++|+++ |+++|+|++|+... +++.
T Consensus 98 ~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~-~~~li~D~a~~~g~~~~~~ 169 (373)
T 3frk_A 98 AKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKKY-NLKLIEDAAQAHGSLYKGM 169 (373)
T ss_dssp CEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHHH-TCEEEEECTTCTTCEETTE
T ss_pred CEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHHc-CCEEEEECCcccCCEECCE
Confidence 9999999874 3467899999999998888887 7789999999 89999999999 99999999998532 2221
Q ss_pred CccccccCCCCCCceEEEeccc--cccccccceeEEEEcC-hhHHHHHHhhhhcc------------ccCCChHHHHHHH
Q 018665 161 THTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQF------------TSGASSISQKAGV 225 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 225 (352)
.+... .++++.|++ |.++..| +.|+++++ +.+++.+....... ++..+.+..++..
T Consensus 170 ---~~~~~-----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~ 240 (373)
T 3frk_A 170 ---KVGSL-----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLR 240 (373)
T ss_dssp ---ETTSS-----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHH
T ss_pred ---ecccc-----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHH
Confidence 11111 237788876 9987325 37888875 45767666543211 1223443333322
Q ss_pred HHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 226 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
.. .+.+++..++.+++.+++.+.|++++ +.+... ......+..++-.. .+..++.+.|.++
T Consensus 241 ~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~L~~~ 302 (373)
T 3frk_A 241 VK-------LKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS----------EKRDELQKYLNNN 302 (373)
T ss_dssp HH-------HHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE----------SSHHHHHHHHHHT
T ss_pred HH-------HHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe----------CCHHHHHHHHHHC
Confidence 22 23356677778888889999998874 554322 11111111111100 1678899998876
Q ss_pred cCEEeccCCCCCC----------------C-------CeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 305 AQVALVPGDAFGD----------------D-------TCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 305 ~gi~i~~g~~~~~----------------~-------~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
||.+.++..... + +.+|+++.. +++|++++++.|++...+
T Consensus 303 -gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 303 -GIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp -TBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred -CCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 999886541100 1 579999987 999999999999876543
No 194
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.95 E-value=2.5e-26 Score=211.57 Aligned_cols=278 Identities=14% Similarity=0.102 Sum_probs=190.4
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC---hHHHHHhcCC--eEEEecccCCCCcccCHHHHHhhcc-CCeeEE
Q 018665 40 LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS---YPEMARIADA--TPVILPTRISENFLLDPKVLESKLT-EKSRLL 113 (352)
Q Consensus 40 ~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~---~~~~~~~~g~--~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i 113 (352)
++++|+++++..++.+++++||+|+++.|+|.+ +.......|. .++.++.+. +++.+|+++|+++++ +++++|
T Consensus 98 v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v 176 (425)
T 3ecd_A 98 VQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLI 176 (425)
T ss_dssp CCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEE
T ss_pred eecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEE
Confidence 458899999999999999999999999999987 2222223444 555565543 346799999999996 589999
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCccccccCCCCCCceEEEecccccccccccee
Q 018665 114 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 192 (352)
Q Consensus 114 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~ 192 (352)
++++|+|| ...+ +++|.++|+++ |+++|+||+|+ ++.+.+.....+. ..++++.|+||.+ +|.|.
T Consensus 177 ~~~~~~~~--~~~~---l~~i~~l~~~~-~~~li~De~~~~g~~~~~~~~~~~~------~~di~~~s~sK~l--~g~~~ 242 (425)
T 3ecd_A 177 IAGFSAYP--RKLD---FARFRAIADSV-GAKLMVDMAHIAGVIAAGRHANPVE------HAHVVTSTTHKTL--RGPRG 242 (425)
T ss_dssp EEECSCCC--SCCC---HHHHHHHHHHH-TCEEEEECGGGHHHHHTTSSCCGGG------TCSEEEEESSGGG--CCCSC
T ss_pred EEccccCC--CcCC---HHHHHHHHHHc-CCEEEEECcChHhhhhcccccCchh------cCcEEEecCCccc--CCCCc
Confidence 99989885 4556 89999999999 99999999965 3333332222211 1238899999998 56688
Q ss_pred EEEEcC-hhHHHHHHhhhhcc-ccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC-CC
Q 018665 193 GYIAGP-KHFVAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QG 269 (352)
Q Consensus 193 g~l~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~ 269 (352)
||++++ +.+.+.+....... ..+++...+.++..++... ..+++++..++++++++++.+.|++. |+.+..+ ..
T Consensus 243 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 319 (425)
T 3ecd_A 243 GFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEA--LTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTD 319 (425)
T ss_dssp EEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCS
T ss_pred EEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCC
Confidence 999988 56767666543322 2234554555555444321 13567788889999999999999886 8887754 46
Q ss_pred ceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec----cCCCC--CCCCeEEEEeec------CHHHHHHHHH
Q 018665 270 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV----PGDAF--GDDTCIRISYAA------SLTTLQAAVE 337 (352)
Q Consensus 270 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~----~g~~~--~~~~~iRi~~~~------~~~~l~~~~~ 337 (352)
++++++.++... .+...+.+.|.+ .||.+. |+... ..++++|++++. ++++++++++
T Consensus 320 ~~~~~~~~~~~~----------~~~~~~~~~l~~-~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~ 388 (425)
T 3ecd_A 320 NHLLLVDLRPKG----------LKGAQVEQALER-AGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGR 388 (425)
T ss_dssp SSEEEEECGGGT----------CCHHHHHHHHHH-TTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHH
T ss_pred ceEEEEEeCCCC----------CCHHHHHHHHHH-cCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHH
Confidence 677888876421 156777777765 499998 44221 124689999654 3799999999
Q ss_pred HHHHHHhhh
Q 018665 338 RIKKGLLTL 346 (352)
Q Consensus 338 ~l~~~~~~~ 346 (352)
.|++++++.
T Consensus 389 ~l~~~l~~~ 397 (425)
T 3ecd_A 389 LILEVFEAL 397 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 999998765
No 195
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.95 E-value=3.3e-26 Score=215.35 Aligned_cols=309 Identities=14% Similarity=0.115 Sum_probs=217.1
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CC-----C-EEEecCCCCCChHHHHHhcCC---
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PG-----D-EVIIPAPFWVSYPEMARIADA--- 82 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~~-----~-~vl~~~~~~~~~~~~~~~~g~--- 82 (352)
+.+.+++. ..|.+.+.+++++++|+|+++..++.++.. +| + .|+++.+.|.++...++..|.
T Consensus 135 ~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~ 214 (504)
T 2okj_A 135 QITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTD 214 (504)
T ss_dssp HHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGG
T ss_pred HHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcc
Confidence 66656655 455543378999999999999999888742 34 5 799999999999999998887
Q ss_pred eEEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 83 TPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 83 ~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
+++.+|++ .++.+|+++|++++++ ++++|++++++||+|.+.| +++|+++|+++ |+++++|++|+++.
T Consensus 215 ~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~-g~~lhvD~a~~~~~ 288 (504)
T 2okj_A 215 NVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKY-NLWLHVDAAWGGGL 288 (504)
T ss_dssp GEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHH-TCEEEEEETTGGGG
T ss_pred cEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CCEEEEehhhhhHH
Confidence 89999986 4567999999999975 5889999999999999999 99999999999 99999999999865
Q ss_pred cCCCCc-cccccCCCCCCceEEEeccccccccccceeEEEEcCh-hHHHHHHhhhhcccc--------------------
Q 018665 157 YAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTS-------------------- 214 (352)
Q Consensus 157 ~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~~~-------------------- 214 (352)
+..... ..+..+ ...++++.|++|+++ .+.++|++++++ ++++........+..
T Consensus 289 ~~~~~~~~~~~g~---~~~D~i~~~~hK~~~-~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (504)
T 2okj_A 289 LMSRKHRHKLNGI---ERANSVTWNPHKMMG-VLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCG 364 (504)
T ss_dssp GGCTTTGGGGTTG---GGCSEEEECTTSTTC-CCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSS
T ss_pred HhCHhhHhhcCCc---ccCCEEEECchhhcC-CCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCC
Confidence 432111 111111 123478889999997 446899999876 465543211111100
Q ss_pred -CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC---CCCceEEEeecCCccCC-----cc
Q 018665 215 -GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE---PQGAFYLFIDFSTYYGS-----EA 285 (352)
Q Consensus 215 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~---~~~g~~~~~~~~~~~~~-----~~ 285 (352)
..+.+.+.++.+++. .++++++.++..++++++.+.|+++++++++. +..+++.+...|..... .+
T Consensus 365 rr~~~l~~~a~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~ 439 (504)
T 2okj_A 365 RHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQR 439 (504)
T ss_dssp CBCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHH
T ss_pred CCccHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhh
Confidence 113455555555554 46688888899999999999999988998875 56666655444431000 00
Q ss_pred cCCCCCCChHHHHHHHHHccCEEeccCCCCCC-CCeEEEEee-c--CHHHHHHHHHHHHHHHhhh
Q 018665 286 EGFGKIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYA-A--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 286 ~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~-~~~iRi~~~-~--~~~~l~~~~~~l~~~~~~~ 346 (352)
... ......++.+.|.+++.+.+.++ .+.. .+++|+++. . +++|++++++.|+++++++
T Consensus 440 ~~~-~~~~~~~l~~~L~~~G~~~~~~~-~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 440 REK-LHKVAPKIKALMMESGTTMVGYQ-PQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp HHH-HTTHHHHHHHHHHHHTSCEEEEE-EETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred HHH-HHHHHHHHHHHHHhCCcEEEEee-EECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 000 00014578888887732444322 2322 368999997 3 8899999999999988764
No 196
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.95 E-value=4.1e-27 Score=217.25 Aligned_cols=289 Identities=13% Similarity=0.095 Sum_probs=183.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHH-hcCC-------------------eEEEecccCC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMAR-IADA-------------------TPVILPTRIS 92 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~-~~g~-------------------~v~~i~~~~~ 92 (352)
..+++++++|++++++.+++.+. .+++.|++..+.|++...... ..+. .+..++.
T Consensus 108 ~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 184 (429)
T 4e77_A 108 TMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY--- 184 (429)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT---
T ss_pred CCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC---
Confidence 57899999999999999998643 345789999999887764211 1111 1111111
Q ss_pred CCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccC
Q 018665 93 ENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~ 168 (352)
.|++.|++++++ ++++++++..++++|... +.+++++|.++|+++ |+++|+||+|+++ ..+.. ......
T Consensus 185 ----~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~-r~g~~-~~~~~~ 257 (429)
T 4e77_A 185 ----NDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEF-GALLIIDEVMTGF-RVALA-GAQDYY 257 (429)
T ss_dssp ----TCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHH-TCEEEEEETTTBT-TTBTT-CHHHHT
T ss_pred ----CCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCc-ccCcc-hHHHhc
Confidence 278999998863 455555443344455544 466799999999999 9999999999987 54431 111111
Q ss_pred CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh---hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHH
Q 018665 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 245 (352)
Q Consensus 169 ~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 245 (352)
... ++ +.|+||.++ +|+|+|++++++++++.+... ....+++.|++.+.++.++++.... ++..++..+..
T Consensus 258 ~~~-pd---i~t~sK~~~-~G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~ 331 (429)
T 4e77_A 258 HVI-PD---LTCLGKIIG-GGMPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ-VGVYETLTELT 331 (429)
T ss_dssp TCC-CS---EEEEEGGGG-TTSCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS-TTHHHHHHHHH
T ss_pred CCC-CC---eeeeccccc-CCCCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Confidence 111 11 458999999 899999999999998877642 2344567899999999998875221 33344444444
Q ss_pred HHHHHHHHHHhcccCCceecCCCCceEEEeecCCccC-Cccc--CCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEE
Q 018665 246 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAE--GFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 322 (352)
Q Consensus 246 ~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iR 322 (352)
+..++.+.+.+... ++....+..|.++++.+++... ..+. .........++.+.|.++ ||.+.++. ...+|
T Consensus 332 ~~l~~~L~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~----~~~~~ 405 (429)
T 4e77_A 332 DSLATGLRHAAKEE-NIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYLAPSA----FEAGF 405 (429)
T ss_dssp HHHHHHHHHHHHHT-TCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEECCSST----TSCEE
T ss_pred HHHHHHHHHHHHhC-CCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEEeecC----CCCEE
Confidence 44444444444333 3333334456778888765310 0000 000000236888888876 99998874 34567
Q ss_pred EEeecCHHHHHHHHHHHHHHHhh
Q 018665 323 ISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 323 i~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
++...+++++++++++|++++++
T Consensus 406 ~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 406 MSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHTT
T ss_pred EeccCCHHHHHHHHHHHHHHHHh
Confidence 77666999999999999999865
No 197
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.95 E-value=4.6e-27 Score=218.42 Aligned_cols=301 Identities=12% Similarity=0.102 Sum_probs=193.8
Q ss_pred CChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHH---hcCCCCEEEecCCCCCChHHHHHh-----
Q 018665 9 GTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLA---VCSPGDEVIIPAPFWVSYPEMARI----- 79 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~---l~~~~~~vl~~~~~~~~~~~~~~~----- 79 (352)
+..+++ +.+++++. ..+ ..++|++++|+++|+..++++ +.++ ++|++.+|+|+++...+..
T Consensus 94 ~~~~~~------~~la~~l~~~~~---~~~~v~~~~gg~eA~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~ 163 (453)
T 2cy8_A 94 ASHPLE------VRWAERIVAAFP---SIRKLRFTGSGTETTLLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSH 163 (453)
T ss_dssp SSCHHH------HHHHHHHHHHCT---TCSEEEEESCHHHHHHHHHHHHHHHHCC-CEEEEECC----------------
T ss_pred CCCHHH------HHHHHHHHhhCC---CCCEEEEeCCHHHHHHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCc
Confidence 345667 99999998 443 578999999999999999988 5554 6888999999876543221
Q ss_pred ------cCC------eEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCC
Q 018665 80 ------ADA------TPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPR 143 (352)
Q Consensus 80 ------~g~------~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~ 143 (352)
.|+ .+..++. .|+++|+++++ +++++|+++..+|++|.+ .+.+++++|.++|++| |
T Consensus 164 ~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~-g 235 (453)
T 2cy8_A 164 FDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQY-G 235 (453)
T ss_dssp ------------CGGGEEEECT-------TCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHT-T
T ss_pred cCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-C
Confidence 122 1223321 38999999886 356666655556789976 4699999999999999 9
Q ss_pred EEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHh-----hhhccccCCCh
Q 018665 144 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK-----IQSQFTSGASS 218 (352)
Q Consensus 144 ~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~-----~~~~~~~~~~~ 218 (352)
+++|+||+|+++ +.+. ...+..... ..+ +.|+||.++ +|+|+|++++++++++.+.. .....++++|+
T Consensus 236 ~~lI~DEv~~g~-~~g~-~~~~~~~~~-~~d---i~s~sK~l~-~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~ 308 (453)
T 2cy8_A 236 ALFILDEVISGF-RVGN-HGMQALLDV-QPD---LTCLAKASA-GGLPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNP 308 (453)
T ss_dssp CEEEEECTTTTT-TTCT-THHHHHHTC-CCS---EEEEEGGGG-TTSSCEEEEECHHHHTTSSSCC---------CCCCH
T ss_pred CEEEEecCcccc-ccCc-hhhhHHhCC-CCc---EEEEChhhh-CCcceEEEechHHHHHHhccccCCCceeCCCCCCCH
Confidence 999999999977 4442 111111111 112 348999998 68999999999998877654 11233567899
Q ss_pred HHHHHHHHHhcc-cCCChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCC-----cc-CCcccCC
Q 018665 219 ISQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFST-----YY-GSEAEGF 288 (352)
Q Consensus 219 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~-----~~-~~~~~~~ 288 (352)
+.+.++.++++. . .+++.++++++++++.+.|+++ .++....+..|.++|+++++ .. .......
T Consensus 309 ~~~aa~~aal~~~~------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 382 (453)
T 2cy8_A 309 ITAAAAIAAIDTIL------EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEV 382 (453)
T ss_dssp HHHHHHHHHHHHHH------HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCS
T ss_pred HHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEecccccccccccccccc
Confidence 999888888863 2 2334556666666666666543 13322223456678888864 10 0000000
Q ss_pred CC--CCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 289 GK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 289 ~~--~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
.. .....++.+.|.++ ||.+.|+ +.+|+++..+++++++++++|+++++++.
T Consensus 383 ~~~~~~~~~~l~~~l~~~-Gv~v~~~------~~~~l~~~~t~~~i~~~l~~l~~~l~~~~ 436 (453)
T 2cy8_A 383 ARPDVKMIAAMRMALILE-GVDIGGR------GSVFLSAQHEREHVEHLVTTFDRVLDRLA 436 (453)
T ss_dssp CCCCHHHHHHHHHHHHHT-TEECBTT------TEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHC-CeEEeCC------CCEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 00 00256788888875 9999653 24777765699999999999999987763
No 198
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.95 E-value=2.1e-27 Score=219.49 Aligned_cols=286 Identities=16% Similarity=0.151 Sum_probs=194.0
Q ss_pred CCCcEEEeCChHHHHHHHHHH---hcCCCCEEEecCCCCCChHHHHH--------------hcCC------eEEEecccC
Q 018665 35 TPDQILVSNGAKQSILQAVLA---VCSPGDEVIIPAPFWVSYPEMAR--------------IADA------TPVILPTRI 91 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~---l~~~~~~vl~~~~~~~~~~~~~~--------------~~g~------~v~~i~~~~ 91 (352)
..++|++++|+++|+..+++. +.+ +++|++.+++|+++...+. ..|+ ++..++.
T Consensus 111 ~~~~v~~~~sgseA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-- 187 (434)
T 2epj_A 111 RGGMIRFVNSGTEATMTAIRLARGYTG-RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-- 187 (434)
T ss_dssp TTCEEEEESSHHHHHHHHHHHHHHHHC-CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET--
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHHhhC-CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC--
Confidence 468999999999999999987 444 5788888899987543221 1232 2444442
Q ss_pred CCCcccCHHHHHhhccC---CeeEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcccccc
Q 018665 92 SENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 167 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~ 167 (352)
.|+++|++++++ ++++|+++..++++|.+. +.+++++|.++|+++ |+++|+||+|+++ ..+. ......
T Consensus 188 -----~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~-~~g~-~~~~~~ 259 (434)
T 2epj_A 188 -----NDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRES-GALLILDEVVTGF-RLGL-EGAQGY 259 (434)
T ss_dssp -----TCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHH-TCEEEEEETTTTT-TSST-THHHHH
T ss_pred -----CCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHc-CCEEEEEcchhce-eCCc-chhhHH
Confidence 278999998863 566666665567899866 699999999999999 9999999999976 3332 111111
Q ss_pred CCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh---hccccCCChHHHHHHHHHhcccCCChHHHHHHHHH
Q 018665 168 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 244 (352)
Q Consensus 168 ~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (352)
... ..+ +.|+||.+| +|+|+|++++++++++.+.... ...+++.|++.+.++.++++. .+. +++.++
T Consensus 260 ~~~-~~d---i~s~sK~l~-~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~----~~~-~~~~~~ 329 (434)
T 2epj_A 260 FNI-EGD---IIVLGKIIG-GGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKA----LEE-EPVYSV 329 (434)
T ss_dssp HTC-CCS---EEEEEGGGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHH----HHH-SCHHHH
T ss_pred hCC-CCC---eeeecchhc-CCcceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHH----HHh-cCHHHH
Confidence 111 111 458999998 5899999999999887765421 234567899999888888874 111 345566
Q ss_pred HHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccC-C-CCCCChHHHHHHHHHccCEEeccCCCCCCCC
Q 018665 245 FRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEG-F-GKIENSESLCRYLLDKAQVALVPGDAFGDDT 319 (352)
Q Consensus 245 ~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~ 319 (352)
++++.+++.+.|+++ .++....+..|.++++.+++.....+.. . .......++.+.|.++ ||.+.++. ..
T Consensus 330 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~----~~ 404 (434)
T 2epj_A 330 SREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRR-GVFIAPSN----LE 404 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST----TS
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHC-CeEEeccC----CC
Confidence 677777777777654 1332222334566888876410000000 0 0000356788888865 99999875 23
Q ss_pred eEEEEeecCHHHHHHHHHHHHHHHhhh
Q 018665 320 CIRISYAASLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 320 ~iRi~~~~~~~~l~~~~~~l~~~~~~~ 346 (352)
.+|+++..+++++++++++|+++++++
T Consensus 405 ~~~~~~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 405 AVFTGLPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp CEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred cEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 577776669999999999999998765
No 199
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.95 E-value=1e-26 Score=217.94 Aligned_cols=312 Identities=10% Similarity=0.024 Sum_probs=218.4
Q ss_pred cCCCCCChhhhccchhhHHHHHHHH-hcCCCCC-------CCcEEEeCChHHHHHHHHHHhcCC---------CC-----
Q 018665 4 VRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYT-------PDQILVSNGAKQSILQAVLAVCSP---------GD----- 61 (352)
Q Consensus 4 y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~-------~~~i~~~~g~~~a~~~~~~~l~~~---------~~----- 61 (352)
|...++..+++ +.+++++. ..|.+.. ..++++|+|+|+|+..++.++..+ ||
T Consensus 105 ~~~~~~~~~le------~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~ 178 (486)
T 1js3_A 105 WAASPACTELE------TVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGA 178 (486)
T ss_dssp GGGCHHHHHHH------HHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred cccChhHHHHH------HHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcc
Confidence 33344455666 88888887 6676532 357899999999999888775321 32
Q ss_pred ---E--EEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCe------eEEEEcCCCCCcccCCCHHH
Q 018665 62 ---E--VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKS------RLLILCSPSNPTGSVYPKNL 130 (352)
Q Consensus 62 ---~--vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~------~~i~i~~p~nptG~~~~~~~ 130 (352)
+ |+++.+.|.++..+++..|.+++.+|++ .++.+|+++|++++++++ .+|++++|+||+|.+.|
T Consensus 179 ~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~--- 253 (486)
T 1js3_A 179 VLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN--- 253 (486)
T ss_dssp HHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---
T ss_pred cCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC---
Confidence 3 7889999999999999999999999985 467799999999997554 48888999999999988
Q ss_pred HHHHHHHHHhCCCEEEEecccccccccCCCCccc-cccCCCCCCceEEEeccccccccccceeEEEEcChh-H-HHHHH-
Q 018665 131 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-F-VAACN- 206 (352)
Q Consensus 131 l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~-~~~~~- 206 (352)
+++|+++|+++ |+++++|++|+++.+....... +..+ .+...++.++||+++. ..++|+++++++ . .+.+.
T Consensus 254 l~~I~~la~~~-~~~lhvD~a~g~~~~~~~~~~~~~~g~---~~adsi~~~~hK~~~~-p~~~G~l~~~~~~~l~~~~~~ 328 (486)
T 1js3_A 254 LLEVGPICHEE-DIWLHVDAAYAGSAFICPEFRHLLNGV---EFADSFNFNPHKWLLV-NFDCSAMWVKRRTDLTGAFKL 328 (486)
T ss_dssp HHHHHHHHHHT-TCEEEEECTTGGGGGGSTTTGGGGTTG---GGCSEEEECHHHHSSC-CSSCEEEEESCHHHHHGGGC-
T ss_pred HHHHHHHHHHc-CCEEEEehhhHHHHHHCHHHHHHhcCc---cccCeeEEchhhhcCC-CcceEEEEEeCHHHHHHHhcC
Confidence 99999999999 9999999999875442211111 1111 1223667889999974 478999988654 2 23221
Q ss_pred --hhh-h--c--------------cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC-
Q 018665 207 --KIQ-S--Q--------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE- 266 (352)
Q Consensus 207 --~~~-~--~--------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~- 266 (352)
.+. . . .+.....+.+.++...+. .++++++.++..++++++.+.|+++|++++..
T Consensus 329 ~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 403 (486)
T 1js3_A 329 DPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-----VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE 403 (486)
T ss_dssp -----------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC
T ss_pred CchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC
Confidence 000 0 0 000122334444444442 56788889999999999999999988998875
Q ss_pred CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHHH
Q 018665 267 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGL 343 (352)
Q Consensus 267 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~ 343 (352)
+..++ +.+.+++.. ....++.+.|.++ |+.+..+..+...+++|+++.. ++++++++++.|++++
T Consensus 404 ~~~~~-v~f~~~~~~----------~~~~~l~~~L~~~-g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 471 (486)
T 1js3_A 404 VTLGL-VCFRLKGSD----------GLNEALLERINSA-RKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLA 471 (486)
T ss_dssp CCSSE-EEEEESSCH----------HHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CceeE-EEEEecChH----------HHHHHHHHHHHhc-CCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 44454 444554210 0257888888877 5443333334446799999754 7899999999999998
Q ss_pred hhhCC
Q 018665 344 LTLRP 348 (352)
Q Consensus 344 ~~~~~ 348 (352)
+++..
T Consensus 472 ~~~~~ 476 (486)
T 1js3_A 472 AELLA 476 (486)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 77654
No 200
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.95 E-value=2.9e-27 Score=220.65 Aligned_cols=315 Identities=14% Similarity=0.091 Sum_probs=205.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----C----CEEEecCCCCCCh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSP-----G----DEVIIPAPFWVSY 73 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~-----~----~~vl~~~~~~~~~ 73 (352)
.|++.++..+++ +.++++++ .+++++++|+++|+..++.++.++ | |+|++..+.|..+
T Consensus 69 ~y~~~~~~~~l~------~~la~~~~-------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~ 135 (467)
T 2oqx_A 69 AYSGSRSYYALA------ESVKNIFG-------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTT 135 (467)
T ss_dssp CSSSCHHHHHHH------HHHHHHHC-------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHH
T ss_pred eeccCchhHHHH------HHHHHHhC-------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccc
Confidence 577777888899 99999984 479999999999999999998777 7 8877763333333
Q ss_pred HHHHHhcCCeEEEecc----cCC----CCcccCHHHHHhhcc----CCeeEEEEcCCCCCc-ccCCCHHHHHHHHHHHHh
Q 018665 74 PEMARIADATPVILPT----RIS----ENFLLDPKVLESKLT----EKSRLLILCSPSNPT-GSVYPKNLLDEIARIVAK 140 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~~----~~~----~~~~~d~~~l~~~l~----~~~~~i~i~~p~npt-G~~~~~~~l~~l~~~~~~ 140 (352)
.......|..+..... +.. .++.+|+++|+++++ +++++|++++|+||+ |.+++.+++++|+++|++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~ 215 (467)
T 2oqx_A 136 QGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKK 215 (467)
T ss_dssp HHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHH
T ss_pred hhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 4455566666654321 111 234579999999997 378999999999997 899999999999999999
Q ss_pred CCCEEEEecccccc----------cccCCCCccccccC-CCCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhh
Q 018665 141 HPRLLVLSDEIYEH----------IIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKI 208 (352)
Q Consensus 141 ~~~~~livD~~~~~----------~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~ 208 (352)
| |+++|+|+++.. ..+.+.....+... ....+ +++.|+||.+|++ . .|+++++++ +++.+...
T Consensus 216 ~-gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~-~-Gg~~~~~~~~~~~~~~~~ 290 (467)
T 2oqx_A 216 Y-DIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVP-M-GGLLCMKDDSFFDVYTEC 290 (467)
T ss_dssp T-TCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCS-S-CEEEEECSGGGHHHHHHH
T ss_pred c-CCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCC-C-ceEEEecChhHHHHHHHH
Confidence 9 999999976654 12333211121100 01112 5678999999755 1 277777766 44443332
Q ss_pred hhc---c-----ccCCChHHHHHHHHHhcccCCChHHH-HHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCC
Q 018665 209 QSQ---F-----TSGASSISQKAGVAALGLGYAGGEVV-SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 279 (352)
Q Consensus 209 ~~~---~-----~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~ 279 (352)
... . ....+.....++...++. ++ ++..++..++.+++.+.|+++ ++.+. +.+++++|+++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~al~~~l~~------~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~ 362 (467)
T 2oqx_A 291 RTLCVVQEGFPTYGGLEGGAMERLAVGLYD------GMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGK 362 (467)
T ss_dssp HHHHHHTTSSCCCCCCCHHHHHHHHHHHHH------TTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHH
T ss_pred HHhhhccCCcccccchhhhHHHHHHHhhHh------hhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechh
Confidence 211 1 111222222222222221 11 123344566778888888887 78777 7778888888752
Q ss_pred cc-CCcccCCCCCCChHHHHHHHHHccCEEeccCCCC--C-----------CCCeEEEEee---cCHHHHHHHHHHHHHH
Q 018665 280 YY-GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--G-----------DDTCIRISYA---ASLTTLQAAVERIKKG 342 (352)
Q Consensus 280 ~~-~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~--~-----------~~~~iRi~~~---~~~~~l~~~~~~l~~~ 342 (352)
.. +.....+ +..++.+.|+++.||.+.|++.| + ..+++|++++ .+++++++++++|+++
T Consensus 363 ~~~~~~~~~~----~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~ 438 (467)
T 2oqx_A 363 LLPHIPADQF----PAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHV 438 (467)
T ss_dssp HSTTSCGGGC----HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHH
T ss_pred hcccCCcccc----cHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 10 0000000 15567888834459999985532 1 1379999998 6899999999999999
Q ss_pred HhhhC
Q 018665 343 LLTLR 347 (352)
Q Consensus 343 ~~~~~ 347 (352)
+++..
T Consensus 439 l~~~~ 443 (467)
T 2oqx_A 439 KENAA 443 (467)
T ss_dssp HHSGG
T ss_pred Hhhhh
Confidence 98754
No 201
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.95 E-value=2e-25 Score=206.37 Aligned_cols=294 Identities=14% Similarity=0.173 Sum_probs=210.1
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh---------cCCCCEEEecCCCCCCh
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV---------CSPGDEVIIPAPFWVSY 73 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l---------~~~~~~vl~~~~~~~~~ 73 (352)
+|++..+..+++ +.++++++ .+++++++++++++..++.++ .++||+|+++.++|.++
T Consensus 57 ~~~~~~~~~~l~------~~la~~~g-------~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~ 123 (437)
T 3bb8_A 57 WLTTGRFNDAFE------KKLGEYLG-------VPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTT 123 (437)
T ss_dssp CCBSCHHHHHHH------HHHHHHHT-------CSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHH
T ss_pred CcCCChHHHHHH------HHHHHHHC-------CCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHH
Confidence 355667778888 99999996 237888889999999999998 78899999999999999
Q ss_pred HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 74 PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
...++..|.+++.++++. .++.+|+++|++++++++++|++++ ++|.+.+ +++|.++|+++ |+++|+|++|+
T Consensus 124 ~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~---~~~i~~l~~~~-~~~li~D~a~~ 195 (437)
T 3bb8_A 124 VNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFD---LAEVRRVADKY-NLWLIEDCCDA 195 (437)
T ss_dssp HHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCC---HHHHHHHHHHH-TCEEEEECTTC
T ss_pred HHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhc---HHHHHHHHHHc-CCEEEEECccc
Confidence 999999999999999874 3567899999999988899998874 3455567 99999999999 99999999998
Q ss_pred cc-ccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHH-Hhhh---hc-----------------
Q 018665 154 HI-IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-NKIQ---SQ----------------- 211 (352)
Q Consensus 154 ~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~-~~~~---~~----------------- 211 (352)
.. .+++ . .... . ..+++.|++|..+++|.+.|+++++++.+..+ .... ..
T Consensus 196 ~g~~~~~---~---~~~~-~-~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (437)
T 3bb8_A 196 LGSTYDG---K---MAGT-F-GDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQ 267 (437)
T ss_dssp TTCEETT---E---ETTS-S-SSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------
T ss_pred cCceECC---e---eccc-c-cCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccccccccccccccc
Confidence 42 2211 1 1111 1 12777888777777888899999986654432 2211 00
Q ss_pred -------------------cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC----
Q 018665 212 -------------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---- 268 (352)
Q Consensus 212 -------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~---- 268 (352)
++...+.+..+++.+.++. +.+..++.+++.+++.+.|++++++.++...
T Consensus 268 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 340 (437)
T 3bb8_A 268 QLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-------IEEFVEKRKANFKYLKDALQSCADFIELPEATENS 340 (437)
T ss_dssp CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTE
T ss_pred ccccccccccccccccccCcccCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCC
Confidence 0111234444444444432 2444555577788899999988776655321
Q ss_pred -Cc---eEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC---CC---------------------Ce
Q 018665 269 -GA---FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DD---------------------TC 320 (352)
Q Consensus 269 -~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~---~~---------------------~~ 320 (352)
.+ +.+.+..+... +..++.+.|.++ ||.+.++.... .+ +.
T Consensus 341 ~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~-GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 408 (437)
T 3bb8_A 341 DPSWFGFPITLKEDSGV-----------SRIDLVKFLDEA-KVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQT 408 (437)
T ss_dssp ECCCSSEEEEECGGGSS-----------CHHHHHHHHHHT-TBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHE
T ss_pred ceeeEEEEEEECCcCcC-----------cHHHHHHHHHHC-CCceeccCCcccccCchhhccCccccCCCcHHHHHhcCE
Confidence 12 23334443211 678899998876 99988765310 00 14
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHh
Q 018665 321 IRISYAA--SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 321 iRi~~~~--~~~~l~~~~~~l~~~~~ 344 (352)
+|++++. +++|++++++.|+++++
T Consensus 409 lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 409 FWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp EEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 8999887 99999999999998875
No 202
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.95 E-value=6.3e-26 Score=206.60 Aligned_cols=276 Identities=13% Similarity=0.156 Sum_probs=199.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH-----HhcCCeEEEecccCCCCc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-----RIADATPVILPTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~-----~~~g~~v~~i~~~~~~~~ 95 (352)
+.++++.+ .+..++++|+++|+.. +..++++||+|+++.+.|.+....+ +..|.+++.++.+
T Consensus 74 ~~la~l~g-------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~----- 140 (400)
T 3nmy_A 74 RCVAALEG-------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT----- 140 (400)
T ss_dssp HHHHHHHT-------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-----
T ss_pred HHHHHHhC-------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-----
Confidence 88888874 3477888888999997 5678899999999999999766554 4459999999863
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|++++++++++++++|++++|+||+|.+.| +++|+++|+++ |+++|+|++|+...+. .++ ..+.+
T Consensus 141 --d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~-g~~livDe~~~~~~~~----~~~-----~~g~d 205 (400)
T 3nmy_A 141 --DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKH-GLLTVVDNTFASPMLQ----RPL-----SLGAD 205 (400)
T ss_dssp --SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHC----CGG-----GGTCS
T ss_pred --CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHc-CCEEEEECCCcccccC----Chh-----hcCCc
Confidence 899999999999999999999999999999 99999999999 9999999999753221 111 12455
Q ss_pred EEEeccccccccccceeEE--EE-cChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGY--IA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 252 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~--l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 252 (352)
+++.|++|.++.+|.++|. ++ .++++++.+......++...+++....+...++. +....++..++...+
T Consensus 206 iv~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-------l~~r~~~~~~~a~~l 278 (400)
T 3nmy_A 206 LVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-------LPLRMRAHCENALAL 278 (400)
T ss_dssp EEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-------HHHHHHHHHHHHHHH
T ss_pred EEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-------HHHHHHHHHHHHHHH
Confidence 9999999999767666654 44 4778888888777666777888777776666653 344556667788888
Q ss_pred HHHhcccCCceec-CC----------------CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 253 VKSFGELEGVKMS-EP----------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 253 ~~~l~~~~g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
.+.|++.|.+..+ .| ..|.++++++++.. +...++.+.|. -.++.+..|+.+
T Consensus 279 ~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----------~~~~~~~~~l~-~~~~~~s~G~~~ 347 (400)
T 3nmy_A 279 AQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----------DAAKRFCEKTE-LFTLAESLGGVE 347 (400)
T ss_dssp HHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----------HHHHHHHHHCS-SSEECSCCCSSS
T ss_pred HHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----------HHHHHHHHcCC-cceEecCCCCCc
Confidence 8999887776543 22 23667888886421 02445555443 234444444432
Q ss_pred C-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHHh
Q 018665 316 G-----------------------DDTCIRISYAASLTTLQAAVERIKKGLL 344 (352)
Q Consensus 316 ~-----------------------~~~~iRi~~~~~~~~l~~~~~~l~~~~~ 344 (352)
. .++.+|+|++. |+.+.+++.|+.+++
T Consensus 348 sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl--e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 348 SLVNHPAVMTHASIPVARREQLGISDALVRLSVGI--EDLGDLRGDLERALV 397 (400)
T ss_dssp CEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHC
T ss_pred ceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc--CCHHHHHHHHHHHHh
Confidence 1 14689999998 233444555666654
No 203
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=1.2e-25 Score=211.18 Aligned_cols=324 Identities=13% Similarity=0.106 Sum_probs=223.5
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcC--------------CCCEEEecC
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCS--------------PGDEVIIPA 67 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------------~~~~vl~~~ 67 (352)
.|...++..+++ +.+++++. ..|++...+.+++++|+|+++..++.++.. +++.|+++.
T Consensus 126 ~~~~~p~~~~le------~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~ 199 (511)
T 3vp6_A 126 TYEIAPVFVLME------QITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSE 199 (511)
T ss_dssp CTTTCHHHHHHH------HHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEET
T ss_pred CcccCchHHHHH------HHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECC
Confidence 456667777888 99999988 778776678999999999999988887643 456899999
Q ss_pred CCCCChHHHHHhcCC---eEEEecccCCCCcccCHHHHHhhccCC------eeEEEEcCCCCCcccCCCHHHHHHHHHHH
Q 018665 68 PFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVYPKNLLDEIARIV 138 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~---~v~~i~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~p~nptG~~~~~~~l~~l~~~~ 138 (352)
+.|.++...++..|. +++.++.+ .++.+|+++|+++++++ +++|++++++|++|.+.| +++|+++|
T Consensus 200 ~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~---l~~I~~ia 274 (511)
T 3vp6_A 200 QSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADIC 274 (511)
T ss_dssp TSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC---HHHHHHHH
T ss_pred CchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc---HHHHHHHH
Confidence 999999999999998 89999986 45679999999999754 889999999999999988 99999999
Q ss_pred HhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcCh-hHHHHHHhhhhccc----
Q 018665 139 AKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFT---- 213 (352)
Q Consensus 139 ~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~~~---- 213 (352)
+++ |+++++|++|++........... +.....-++++.+.+|+++.+ ..+|+++.++ .+++........+.
T Consensus 275 ~~~-~~~lhvD~a~~~~~~~~~~~~~~--~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 350 (511)
T 3vp6_A 275 EKY-NLWLHVDAAWGGGLLMSRKHRHK--LNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQD 350 (511)
T ss_dssp HHH-TCEEEEEETTGGGGGGCTTTGGG--GTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSS
T ss_pred HHc-CCEEEEEccchhhHhhChhhhhh--ccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCcc
Confidence 999 99999999998754422111111 111112347888999999734 6788887654 45555432111000
Q ss_pred -------------c----CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC---CCCceEE
Q 018665 214 -------------S----GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE---PQGAFYL 273 (352)
Q Consensus 214 -------------~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~---~~~g~~~ 273 (352)
. ....+...++...+ ..++++++.++..++.+++.+.|++.||++++. +..+.+.
T Consensus 351 ~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~-----g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~ 425 (511)
T 3vp6_A 351 KHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK-----GTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVC 425 (511)
T ss_dssp CSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEE
T ss_pred cccccccCccCCCCCCCCchHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEE
Confidence 0 01233333333433 267889999999999999999999989999876 4455544
Q ss_pred EeecCCccCCcccCC----CCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEee-c--CHHHHHHHHHHHHHHHhhh
Q 018665 274 FIDFSTYYGSEAEGF----GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-A--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 274 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~-~--~~~~l~~~~~~l~~~~~~~ 346 (352)
|.-.|.......... .-.....++.+.|.+++.+.+......+..+++|+++. . +++|++++++.|++..+++
T Consensus 426 f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 426 FWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp EEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 433333211000000 00001346888888874334331111112347999984 3 8899999999999887654
No 204
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.95 E-value=1.2e-26 Score=215.46 Aligned_cols=290 Identities=13% Similarity=0.115 Sum_probs=201.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChH-HHHHHHHHHhcC--CCCEEEecCCCCCChHHHHHhcCCeEEEecccC-CCCcc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAK-QSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~-~a~~~~~~~l~~--~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~-~~~~~ 96 (352)
+.+++++ | .+++ +++++|+| .++..++.++.. +++.|+++.+.|.++...++..|.+++.++..+ +.++.
T Consensus 140 ~~la~~~---g--~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~ 213 (456)
T 2z67_A 140 ESFFKQL---G--LNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVY 213 (456)
T ss_dssp HHHHHHT---T--CCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEE
T ss_pred HHHHHHc---C--CCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCC
Confidence 4555554 4 3334 99999999 455545555433 567899999999999999999999999998742 35677
Q ss_pred cCHHHHHhhc-c----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCC
Q 018665 97 LDPKVLESKL-T----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 97 ~d~~~l~~~l-~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
+|+++|++++ + .++.+|++++|+||+|.+.| +++|.++|+++ |+++++|++|+.+... ..+........
T Consensus 214 ~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~-g~~v~vD~A~~~~~~g-~~~~~~~~~~~- 287 (456)
T 2z67_A 214 VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENY-DIPHIINGAYAIQNNY-YLEKLKKAFKY- 287 (456)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTTTTCHH-HHHHHHHHHTS-
T ss_pred cCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CCcEEEECcchHHHHH-hhHHHHHhhCC-
Confidence 9999999999 4 36777888999999999999 99999999999 9999999998764321 10011111111
Q ss_pred CCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHH
Q 018665 172 WERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 250 (352)
Q Consensus 172 ~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
+.++++.|++|.++ ++.++|++++ ++++++.+......+....+...+.++...+. .++++++.++..++++
T Consensus 288 -~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~-----~~~~~~~~~~~~~~~~ 360 (456)
T 2z67_A 288 -RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-----SKNYLELVKNQKNSKK 360 (456)
T ss_dssp -CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
Confidence 23378899999875 6688999999 57787777432211111111223333333332 4677888999999999
Q ss_pred HHHHHhcccC---CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE---Eec------cCCCC--C
Q 018665 251 FLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV---ALV------PGDAF--G 316 (352)
Q Consensus 251 ~l~~~l~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~i~------~g~~~--~ 316 (352)
++.+.|++++ |+.+..++ ++ +++.+... + ...++.+.|.++ |+ -+. .|..| .
T Consensus 361 ~l~~~L~~~~~~~g~~v~~~~-~~-v~~~~~~~-~----------~~~~l~~~L~~~-gi~~~rv~~~~g~f~G~~~~~~ 426 (456)
T 2z67_A 361 LLDELLNDLSKKTGGKFLDVE-SP-IASCISVN-S----------DPVEIAAKLYNL-RVTGPRGIKKTDHFGNCYLGTY 426 (456)
T ss_dssp HHHHHHHHHHHHSSCCBCCCC-CS-SEEEEECS-S----------CHHHHHHHHHHT-TEESCEEECTTCHHHHTCSSCC
T ss_pred HHHHHHHhcccccCCEecCCC-Ce-EEEEEecc-c----------HHHHHHHHHHHc-CCCcceEEeecCcccccccccc
Confidence 9999999886 77777666 43 44555210 0 246888888876 54 332 12222 1
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
..+++|++++. +++|+++++++|++++
T Consensus 427 ~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 427 THDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp SCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred CcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 35799999985 8999999999998764
No 205
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.95 E-value=7.2e-27 Score=215.46 Aligned_cols=307 Identities=14% Similarity=0.114 Sum_probs=195.0
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHHh-cCCeEEEecccCCCCcc
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~~-~g~~v~~i~~~~~~~~~ 96 (352)
..+++.+. ..+ ..++|++++|++++++.+++... .++++|++..++|+++...+.. .+..+..+.++...+..
T Consensus 95 ~~la~~l~~~~~---~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (427)
T 3fq8_A 95 NVLAEMVNDAVP---SIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVP 171 (427)
T ss_dssp HHHHHHHHHHST---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSC
T ss_pred HHHHHHHHHhCC---CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCC
Confidence 55666665 333 57899999999999999995432 2357899999998875432221 11111111111111100
Q ss_pred ------------cCHHHHHhhccC---CeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEecccccccccCCC
Q 018665 97 ------------LDPKVLESKLTE---KSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 160 (352)
Q Consensus 97 ------------~d~~~l~~~l~~---~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~ 160 (352)
.|++.|++++++ ++++++++.++|++|...+ .+++++|.++|+++ |+++|+||+|+++ +.+.
T Consensus 172 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~g~-~~g~ 249 (427)
T 3fq8_A 172 KKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEH-DALLVFDEVITGF-RIAY 249 (427)
T ss_dssp HHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTBT-TTBT
T ss_pred CcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecccccc-ccCc
Confidence 188999998864 6777777777788887665 66699999999999 9999999999987 5443
Q ss_pred CccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhh---hhccccCCChHHHHHHHHHhcccCCChHH
Q 018665 161 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEV 237 (352)
Q Consensus 161 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 237 (352)
. ........ ...+.|+||.++ +|+|+|++++++++++.+... ....+++.|++.+.++.++++.... ++.
T Consensus 250 ~-~~~~~~~~----~~di~t~sK~~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~ 322 (427)
T 3fq8_A 250 G-GVQEKFGV----TPDLTTLGKIIG-GGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ-PGT 322 (427)
T ss_dssp T-HHHHHTTC----CCSEEEECGGGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTH
T ss_pred c-hhhHhcCC----CCChhhhhhhhh-CCcceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh-cCH
Confidence 2 11111111 112568899999 899999999999998877642 1334556799999999998875221 233
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccC--CCCCCChHHHHHHHHHccCEEeccCCCC
Q 018665 238 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG--FGKIENSESLCRYLLDKAQVALVPGDAF 315 (352)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~gi~i~~g~~~ 315 (352)
.+++.+..+..++.+.+.+... ++....+..|.++++.+++.....+.. ........++.+.|.++ ||.+.+++.
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~~~- 399 (427)
T 3fq8_A 323 YEYLDQITKRLSDGLLAIAQET-GHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYLAPSQF- 399 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSSTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHC-CcEEecCCC-
Confidence 3333333333333343333333 332223345677888876421100000 00000145788888876 999988752
Q ss_pred CCCCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 316 GDDTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 316 ~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
..+|++...+++++++++++|++++++
T Consensus 400 ---~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 400 ---EAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp ---SCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 355666556999999999999999875
No 206
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=9.8e-26 Score=211.49 Aligned_cols=307 Identities=14% Similarity=0.057 Sum_probs=217.2
Q ss_pred HHHHHHHH-hcCCCCCCCcEE---EeCChHHHHHHHHHHhcCC--------CC-----EEEecCCCCCChHHHHHhcCCe
Q 018665 21 QQFVINLK-ENGLSYTPDQIL---VSNGAKQSILQAVLAVCSP--------GD-----EVIIPAPFWVSYPEMARIADAT 83 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~---~~~g~~~a~~~~~~~l~~~--------~~-----~vl~~~~~~~~~~~~~~~~g~~ 83 (352)
+.+.+++. ..|.+..++++. +++|+++++..++.++..+ |+ +|+++.++|..+...++..|.+
T Consensus 98 ~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (502)
T 3hbx_A 98 NRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVE 177 (502)
T ss_dssp HHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCce
Confidence 67777777 666654355544 5899999999888877544 55 8999999999999999999999
Q ss_pred EEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-----CEEEEeccccccccc-
Q 018665 84 PVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-----RLLVLSDEIYEHIIY- 157 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~-----~~~livD~~~~~~~~- 157 (352)
++.+++++ +++.+|+++|++++++++++|++++|+||||.+.| +++|.++|++++ |+++++|++|+++..
T Consensus 178 ~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p 253 (502)
T 3hbx_A 178 LKEVKLSE-GYYVMDPQQAVDMVDENTICVAAILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAP 253 (502)
T ss_dssp EEEECCBT-TBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHH
T ss_pred eEEEecCC-CcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhh
Confidence 99999874 44779999999999999999999999999999999 888888887652 799999999986531
Q ss_pred --CCCCccccccCCCCCCceEEEeccccccccccceeEEEEcC-hhHHHHHHhhhhcc----------ccCCChHHHHHH
Q 018665 158 --APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF----------TSGASSISQKAG 224 (352)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 224 (352)
.+.....+. ..+-+.+..|.+|.++ ++.++|+++.. ++.+.........+ ..+.+.....+.
T Consensus 254 ~~~~~~~~~~~----~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~ 328 (502)
T 3hbx_A 254 FLYPELEWDFR----LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQ 328 (502)
T ss_dssp HHCTTCCCSTT----STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHH
T ss_pred hhCcccccccC----CCCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHH
Confidence 121111111 1245578889999985 66788987764 44432211111011 012222222223
Q ss_pred HHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHH
Q 018665 225 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD 303 (352)
Q Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (352)
..++.. ...+.+.+..++..++++++.+.|+++++++++.+ ....++.+.+++... .+..++.+.|.+
T Consensus 329 ~~al~~--lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~---------~~~~~l~~~L~~ 397 (502)
T 3hbx_A 329 YYQLIR--LGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSC---------HTEFEISDMLRR 397 (502)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSS---------CCHHHHHHHHHT
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCc---------CCHHHHHHHHHh
Confidence 333321 01456778888888999999999999977988865 445556677654210 156789999886
Q ss_pred ccCEEeccCCCCC---CCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 304 KAQVALVPGDAFG---DDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 304 ~~gi~i~~g~~~~---~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
+ |+.+....... ...++|+++.. ++++++++++.|+++++.++.
T Consensus 398 ~-Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 398 Y-GWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp T-TCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred C-CcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6 88764432221 23589999987 889999999999999987755
No 207
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.95 E-value=7.1e-26 Score=212.69 Aligned_cols=303 Identities=11% Similarity=0.105 Sum_probs=207.8
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHh----c---------CC------CC-EEEecCCCCCChHHHHHh
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAV----C---------SP------GD-EVIIPAPFWVSYPEMARI 79 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l----~---------~~------~~-~vl~~~~~~~~~~~~~~~ 79 (352)
+.+.+++. ..|.+ ..+++++|+|+|+++..++.++ . .+ ++ .|+++.+.|.++...++.
T Consensus 143 ~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~ 221 (497)
T 2qma_A 143 QKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASW 221 (497)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHH
Confidence 66566665 44543 2479999999999999888873 2 12 35 799999999999999998
Q ss_pred cCC---eEEEecccCCCCcccCHHHHHhhccCC------eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 80 ADA---TPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 80 ~g~---~v~~i~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
.|. +++.+|++ .++.+|+++|+++++++ +.+|++++++||+|...| +++|+++|+++ |+++++|+
T Consensus 222 ~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~---l~~I~~l~~~~-~~~l~vD~ 295 (497)
T 2qma_A 222 MGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD---LDFIADMAVKH-DMWMHVDG 295 (497)
T ss_dssp TTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHH-TCEEEEEE
T ss_pred cCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC---HHHHHHHHHHc-CCEEEEeh
Confidence 877 79999986 45679999999998643 447888899999999999 99999999999 99999999
Q ss_pred cccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChh-HHHHHHhhhhcc-cc---CCC--------
Q 018665 151 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQF-TS---GAS-------- 217 (352)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~-~~~~~~~~~~~~-~~---~~~-------- 217 (352)
+|+++.........+..+ ...++++.|+||+++ .+.++|+++++++ .++.+.....+. .. .++
T Consensus 296 a~~~~~~~~~~~~~~~gi---~~~D~i~~s~hK~l~-~p~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 371 (497)
T 2qma_A 296 AYGGALILSSHKSRLKGV---ERAHSISVDFHKLFY-QTISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIAT 371 (497)
T ss_dssp TTGGGGGGSTTGGGGTTG---GGCSEEEEETTTTTC-CCSSCEEEEESCGGGGGGGCC--------------------CC
T ss_pred hhhHHHHhCcchHhhcCc---ccCCEEEEcchhccC-CCcceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCC
Confidence 999865432210011111 123477889999987 4468999987543 333321110000 00 011
Q ss_pred -----hHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCC
Q 018665 218 -----SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 292 (352)
Q Consensus 218 -----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
.+.+.++...+ ..++++++.++..++++++.+.|+++++++++.+..+.++++++.+... .. ..
T Consensus 372 ~r~~~al~~~~~l~~l-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~-----~~ 440 (497)
T 2qma_A 372 TKRFDALKVFMTMQNV-----GPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETA-DL-----DE 440 (497)
T ss_dssp SCCCTHHHHHHHHHHT-----CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSS-CH-----HH
T ss_pred CCchhHHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCcc-CH-----HH
Confidence 11222222332 2577888889999999999999999889988643333345566543200 00 00
Q ss_pred ChHHHHHHHHHccCEEeccCCCCCCCCeEEEEe-ec--CHHHHHHHHHHHHHHHhhh
Q 018665 293 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~-~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
...++.+.|.++ |+.+.+++.+...+++|+++ +. ++++++++++.|+++++++
T Consensus 441 l~~~l~~~l~~~-G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 441 LNKALRLEALTR-GIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC-CCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 124566777766 88776655454457899998 43 8999999999999998764
No 208
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.95 E-value=1.7e-26 Score=212.86 Aligned_cols=293 Identities=15% Similarity=0.132 Sum_probs=195.3
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHH---hcCCCCEEEecCCCCCChHHHHH-h-------------cCC
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLA---VCSPGDEVIIPAPFWVSYPEMAR-I-------------ADA 82 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~---l~~~~~~vl~~~~~~~~~~~~~~-~-------------~g~ 82 (352)
+.+++.+. ..+ ..++|++++|+++++..+++. +.+ ++.|++.+|+|+++...+. . .|+
T Consensus 95 ~~l~~~l~~~~~---~~~~v~~~~~g~ea~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~ 170 (424)
T 2e7u_A 95 VALAKKVKRAYP---FVDLVRFVNSGTEATMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGV 170 (424)
T ss_dssp HHHHHHHHHHCT---TCCEEEEESSHHHHHHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTC
T ss_pred HHHHHHHHHhCC---CCCEEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCC
Confidence 66666666 332 578999999999999999886 444 4789999999988654322 1 122
Q ss_pred ------eEEEecccCCCCcccCHHHHHhhcc---CCeeEEEEcCCC-CCcccCC-CHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 83 ------TPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPS-NPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 83 ------~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i~~p~-nptG~~~-~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++..++. .|++.|++.++ +++++++ ++|+ +++|.+. +.+++++|.++ ++| |+++|+||+
T Consensus 171 ~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l-~~~-g~~lI~DEv 240 (424)
T 2e7u_A 171 PEEYAKLTLVLEY-------NDPEGLREVLKRRGEEIAAII-FEPVVGNAGVLVPTEDFLKALHEA-KAY-GVLLIADEV 240 (424)
T ss_dssp CHHHHTTEEEECT-------TCHHHHHHHHHHHGGGEEEEE-ECSSBCTTSCBCCCHHHHHHHHHG-GGG-TCEEEEECT
T ss_pred CCccCCceEeCCC-------CCHHHHHHHHHhCCCCEEEEE-EeCCCCCCCCcCCCHHHHHHHHHH-HHc-CCEEEEecC
Confidence 2334432 37899998886 3455555 4564 4589765 78899999999 999 999999999
Q ss_pred ccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhh---hccccCCChHHHHHHHHHh
Q 018665 152 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAAL 228 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l 228 (352)
|+++ ..+.. ........ ..+ +.|+||.+| +|+|+|++++++++++.+.... ...+++.|++.+.++.+++
T Consensus 241 ~~g~-~~g~~-~~~~~~~~-~~d---i~s~sK~l~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal 313 (424)
T 2e7u_A 241 MTGF-RLAFG-GATELLGL-KPD---LVTLGKILG-GGLPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATL 313 (424)
T ss_dssp TTTT-TSSTT-HHHHHHTC-CCS---EEEECGGGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHH
T ss_pred cccc-ccchh-HHHHHhCC-Ccc---hhhhhhhhh-CCcceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHH
Confidence 9987 44421 11111111 112 348999999 6999999999999888775521 2335678899999988888
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccC-CC-CCCChHHHHHHHHH
Q 018665 229 GLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEG-FG-KIENSESLCRYLLD 303 (352)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~ 303 (352)
+. .+..+++.++++++.+++.+.|+++ .++....+..|.++|+++++.....+.. .. ......++.+.|.+
T Consensus 314 ~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 389 (424)
T 2e7u_A 314 EL----LEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLD 389 (424)
T ss_dssp HH----HHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHT
T ss_pred HH----HHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHH
Confidence 74 1112456667777777777777654 1332222334567888886410000000 00 00035578888886
Q ss_pred ccCEEeccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHH
Q 018665 304 KAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 343 (352)
Q Consensus 304 ~~gi~i~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~ 343 (352)
.||.+.++. ...+|+++..+++++++++++|++++
T Consensus 390 -~Gv~v~~~~----~~~~~~~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 390 -RGIYWPPSN----FEAAFLSVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp -TTEECCSSS----SSCEECCTTCCHHHHHHHHHHHHHHC
T ss_pred -CCeEEeccC----CCceEeeccCCHHHHHHHHHHHHHhC
Confidence 599999875 23578776669999999999998763
No 209
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.4e-25 Score=207.80 Aligned_cols=280 Identities=14% Similarity=0.092 Sum_probs=198.2
Q ss_pred EEE-eCChHHHHHHHHHHhcCCCCEEEecCCCCCChH-H----HHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCee
Q 018665 39 ILV-SNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-E----MARIADATPVILPTRISENFLLDPKVLESKLT-EKSR 111 (352)
Q Consensus 39 i~~-~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~-~----~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~ 111 (352)
+.+ ++|+++++..++.+++++||+|+++.|+|.++. . .+...+..++.++++. .++.+|+++++++++ .+++
T Consensus 109 ~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~ 187 (447)
T 3h7f_A 109 ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPK 187 (447)
T ss_dssp EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCS
T ss_pred eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCe
Confidence 444 788899999999999999999999999987732 1 1222455666777653 345689999999985 4788
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCccccccCCCCCCceEEEeccccccccccc
Q 018665 112 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 190 (352)
Q Consensus 112 ~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 190 (352)
++++++|+||++. + +++|.++|+++ |+++|+||+|. ++.+.+.....+ . ...+++.|+||++ +|+
T Consensus 188 ~i~~~~~~~~~~~--~---l~~i~~l~~~~-g~lli~Dea~~~g~~~~g~~~~~~---~---~~di~~~s~sK~l--~G~ 253 (447)
T 3h7f_A 188 VIIAGWSAYPRVL--D---FAAFRSIADEV-GAKLLVDMAHFAGLVAAGLHPSPV---P---HADVVSTTVHKTL--GGG 253 (447)
T ss_dssp EEEEECSSCCSCC--C---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSCCST---T---TCSEEEEESSGGG--CCC
T ss_pred EEEEcCCCCCCcc--C---HHHHHHHHHHc-CCEEEEECCchhhhhcCCCCCCCC---C---CCcEEEecCCcCC--CCC
Confidence 8888899998876 5 99999999999 99999999974 344433322222 1 2238899999988 467
Q ss_pred eeEEEEcChhHHHHHHhhhhcccc-CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc----CCceec
Q 018665 191 RLGYIAGPKHFVAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMS 265 (352)
Q Consensus 191 ~~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g~~~~ 265 (352)
|.|++++++++++.+......+.. +++...+.++..++... ..+++++..+++.++++++.+.|++. +|+.+.
T Consensus 254 ~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~ 331 (447)
T 3h7f_A 254 RSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIA--ATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVV 331 (447)
T ss_dssp SCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEG
T ss_pred CeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEe
Confidence 889999999998888765443333 34444455555555431 13467888889999999999999876 577776
Q ss_pred C-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEec----cC--CCCCCCCeEEEEeec------CHHHH
Q 018665 266 E-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV----PG--DAFGDDTCIRISYAA------SLTTL 332 (352)
Q Consensus 266 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~----~g--~~~~~~~~iRi~~~~------~~~~l 332 (352)
. +..+++++++++... .+...+.+.|. +.||.+. |+ .....++++|++++. +++++
T Consensus 332 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~-~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei 400 (447)
T 3h7f_A 332 SGGTDVHLVLVDLRDSP----------LDGQAAEDLLH-EVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEF 400 (447)
T ss_dssp GGSCSSSEEEEECTTSS----------CCHHHHHHHHH-HTTEECBC-------------CEEEEECHHHHHHTCCHHHH
T ss_pred cCCCCCCEEEEEcCCCC----------CCHHHHHHHHH-HCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHH
Confidence 4 345666777775421 14555555544 5599998 55 223346789998863 67999
Q ss_pred HHHHHHHHHHHhhh
Q 018665 333 QAAVERIKKGLLTL 346 (352)
Q Consensus 333 ~~~~~~l~~~~~~~ 346 (352)
+++++.|++++.+.
T Consensus 401 ~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 401 TEVADIIATALATG 414 (447)
T ss_dssp HHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998754
No 210
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=4.3e-25 Score=202.92 Aligned_cols=277 Identities=13% Similarity=0.112 Sum_probs=192.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEe-cccCCCCc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVIL-PTRISENF 95 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i-~~~~~~~~ 95 (352)
+.++++++ .. ..++++++++|+..++.+++++||+|+++.+.|.++...+ +..|.+++.+ +.+
T Consensus 65 ~~la~~~g------~~-~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----- 132 (421)
T 2ctz_A 65 KRLAALEG------GK-AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE----- 132 (421)
T ss_dssp HHHHHHHT------CS-EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-----
T ss_pred HHHHHHhC------CC-ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-----
Confidence 99999986 22 3455666799999999999999999999999999887765 7889999998 653
Q ss_pred ccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCce
Q 018665 96 LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 175 (352)
Q Consensus 96 ~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (352)
|++++++++++++++|++++|+||+|.+.| +++|.++|+++ |+++|+|+++..+.+.+. ++ . .+.+
T Consensus 133 --d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~-g~~livD~~~~~~g~~~~---~~-~----~~~D 198 (421)
T 2ctz_A 133 --RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREK-GVALIVDNTFGMGGYLLR---PL-A----WGAA 198 (421)
T ss_dssp --CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECGGGGGGTSCC---GG-G----GTCS
T ss_pred --CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCcccccccCC---cc-c----cCCe
Confidence 799999999999999999999999999999 99999999999 999999999932323221 12 1 2345
Q ss_pred EEEeccccccccccceeEEEEcC---hhH----HHHHHhh--------------------------hhccccCCChHHHH
Q 018665 176 LTVNGFSKAFAMTGWRLGYIAGP---KHF----VAACNKI--------------------------QSQFTSGASSISQK 222 (352)
Q Consensus 176 i~~~s~sK~~g~~g~~~g~l~~~---~~~----~~~~~~~--------------------------~~~~~~~~~~~~~~ 222 (352)
+++.|++|.++.+|.++|++++. +++ ++.+... ....+...+++...
T Consensus 199 i~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~ 278 (421)
T 2ctz_A 199 LVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAW 278 (421)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHH
T ss_pred EEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 99999999998788888888763 122 2222210 01122245555555
Q ss_pred HHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecC-C-----------------CCceEEEeecCCccCCc
Q 018665 223 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-P-----------------QGAFYLFIDFSTYYGSE 284 (352)
Q Consensus 223 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~-----------------~~g~~~~~~~~~~~~~~ 284 (352)
++...++. +....++..++.+++.+.|++.|++..+. | ..|.++.+.+.+..
T Consensus 279 ~~~~~l~~-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~--- 348 (421)
T 2ctz_A 279 VVLLGMET-------LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGY--- 348 (421)
T ss_dssp HHHHHHTT-------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHH---
T ss_pred HHHcCcch-------HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCH---
Confidence 55454442 34445555678888999999888887652 1 23445666665310
Q ss_pred ccCCCCCCChHHHHHHHHHccCEEeccCCCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHH
Q 018665 285 AEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----------------------DDTCIRISYAASLTTLQAAVERIKK 341 (352)
Q Consensus 285 ~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~~~~l~~ 341 (352)
.....+.+.+. ..++.+..|+.+. .++.+|+|++. ++++++++.|++
T Consensus 349 -------~~~~~~~~~l~-~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~~ 418 (421)
T 2ctz_A 349 -------EAAKRFISRLK-LISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELKE 418 (421)
T ss_dssp -------HHHHHHHHTCS-SSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHH
T ss_pred -------HHHHHHHHhCC-cceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHH
Confidence 02334444432 2344454442211 14789999987 577888888877
Q ss_pred HH
Q 018665 342 GL 343 (352)
Q Consensus 342 ~~ 343 (352)
++
T Consensus 419 al 420 (421)
T 2ctz_A 419 AL 420 (421)
T ss_dssp HT
T ss_pred Hh
Confidence 65
No 211
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=1.9e-24 Score=203.71 Aligned_cols=300 Identities=13% Similarity=0.109 Sum_probs=207.0
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCC------EEEecCCCCCChHHHHHhcCC---e
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC-------S-PGD------EVIIPAPFWVSYPEMARIADA---T 83 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~-~~~------~vl~~~~~~~~~~~~~~~~g~---~ 83 (352)
+.++++++ .+.+++++++|+|+++..++.++. + +|+ .|+++.+.|.++...++..|. +
T Consensus 155 ~~la~l~g-----~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~ 229 (515)
T 2jis_A 155 RKLRALVG-----WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDS 229 (515)
T ss_dssp HHHHHHHT-----CSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred HHHHHHhC-----CCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCc
Confidence 44555554 447899999999999988888763 2 454 899999999999999999988 8
Q ss_pred EEEecccCCCCcccCHHHHHhhccC------CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 84 PVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~~------~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
++.+|++ .++.+|+++|++++++ ++++|++++++|++|.+.| +++|+++|+++ |+++++|++++++..
T Consensus 230 v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~-g~~l~vD~a~~~~~~ 303 (515)
T 2jis_A 230 VRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRH-GLWLHVDAAWGGSVL 303 (515)
T ss_dssp EEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHH-TCEEEEEETTGGGGG
T ss_pred EEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHc-CCeEEEehhhhhHHH
Confidence 9999986 3567999999999975 4889999999999999999 99999999999 999999999998665
Q ss_pred CCCCcc-ccccCCCCCCceEEEeccccccccccceeEEEEcChh--HHHHHHh----hh----h-------cccc-----
Q 018665 158 APATHT-SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACNK----IQ----S-------QFTS----- 214 (352)
Q Consensus 158 ~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~--~~~~~~~----~~----~-------~~~~----- 214 (352)
...... .+..+ .+.++++.|++|+++ .+.++|+++++++ +++.... +. . ..+.
T Consensus 304 ~~~~~~~~~~g~---~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 379 (515)
T 2jis_A 304 LSQTHRHLLDGI---QRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCG 379 (515)
T ss_dssp GCTTTGGGGTTG---GGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSS
T ss_pred hChhhHhhcCCC---ccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCC
Confidence 322111 11111 133488999999987 4467999998766 6664211 10 0 0000
Q ss_pred -CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCC
Q 018665 215 -GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIE 292 (352)
Q Consensus 215 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
....+.+.++.+++. .+.++++.++..++++++.+.|+++++++++.+ ..+.+.+...|.... +.....
T Consensus 380 rr~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~----~~~~~~ 450 (515)
T 2jis_A 380 RRVDCLKLWLMWKAQG-----DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLR----GKQESP 450 (515)
T ss_dssp CCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGT----TCTTST
T ss_pred CcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCcccc----ccccch
Confidence 111334444444543 466788889999999999999999889988754 345444433342110 000000
Q ss_pred C--------hHHHHHHHHHccCEEecc-CCCCCCCCeEEEEee-c--CHHHHHHHHHHHHHHHhh
Q 018665 293 N--------SESLCRYLLDKAQVALVP-GDAFGDDTCIRISYA-A--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 293 ~--------~~~~~~~l~~~~gi~i~~-g~~~~~~~~iRi~~~-~--~~~~l~~~~~~l~~~~~~ 345 (352)
+ ...+.+.|.++ |+.... ....+..+++|+++. . +++|++++++.|++++++
T Consensus 451 ~~~~~l~~~~~~l~~~l~~~-G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 451 DYHERLSKVAPVLKERMVKE-GSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp THHHHHHTHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhc-CCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 12356677766 643321 111122468999994 4 889999999999998765
No 212
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.94 E-value=3.6e-24 Score=195.07 Aligned_cols=289 Identities=14% Similarity=0.223 Sum_probs=203.9
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-------cCCCCEEEecCCCCCChHH
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAV-------CSPGDEVIIPAPFWVSYPE 75 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-------~~~~~~vl~~~~~~~~~~~ 75 (352)
+|++.++..+++ +.++++++ .+++++++++++++..++.++ .++||+|+++.++|.++..
T Consensus 29 ~~~~~~~~~~l~------~~la~~~~-------~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~ 95 (390)
T 3b8x_A 29 MFTMGEYVKQYE------TQFAKTFG-------SKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYY 95 (390)
T ss_dssp CCSSCHHHHHHH------HHHHHHHT-------CSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHH
T ss_pred CCCCChHHHHHH------HHHHHHHC-------CCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHH
Confidence 455667778888 99999986 236788888889999999998 7789999999999999999
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
.++..|.+++.++++++ ++.+|+++|++++++++++|++++ ++|.+.+ +++|.++|+++ |+++|+|++|+..
T Consensus 96 ~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~---~~~i~~l~~~~-~~~li~D~a~~~g 167 (390)
T 3b8x_A 96 PLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPNN---FDEINKIIGGR-DIILLEDNCESMG 167 (390)
T ss_dssp HHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCC---HHHHHHHHTTS-CCEEEEECTTCTT
T ss_pred HHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChhh---HHHHHHHHHHc-CCEEEEECcCccc
Confidence 99999999999998753 467999999999988899988874 5677777 99999999999 9999999999842
Q ss_pred -ccCCCCccccccCCCCCCceEEEec--cccccccccceeEEEEcCh-hHHHHHHhhhhc--------------------
Q 018665 156 -IYAPATHTSFASLPGMWERTLTVNG--FSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQ-------------------- 211 (352)
Q Consensus 156 -~~~~~~~~~~~~~~~~~~~~i~~~s--~sK~~g~~g~~~g~l~~~~-~~~~~~~~~~~~-------------------- 211 (352)
.+.+ ...... .++...| .+|.++ +| +.|++++++ .+.+.++.....
T Consensus 168 ~~~~~------~~~g~~--~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 237 (390)
T 3b8x_A 168 ATFNN------KCAGTF--GLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQ 237 (390)
T ss_dssp CEETT------EETTSS--SSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCT
T ss_pred CEECC------cccccc--cceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccc
Confidence 2211 111111 1122222 245553 33 348888876 666655543210
Q ss_pred -----------cccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC--CCce-EEEeec
Q 018665 212 -----------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAF-YLFIDF 277 (352)
Q Consensus 212 -----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~g~-~~~~~~ 277 (352)
++..++.+...++...+ +.+++..++.+++++++.+.|++++++.+..+ ..++ .+++.+
T Consensus 238 ~~~~~~~~~~g~~~~~~~~~aa~~l~~l-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~ 310 (390)
T 3b8x_A 238 FEESFKFVLPGYNVRPLEMSGAIGIEQL-------KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFII 310 (390)
T ss_dssp TTSSSCBCSCCCBCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEE
T ss_pred cccccceeccccccCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEe
Confidence 01114444444433333 45667788888899999999998888877643 2333 245555
Q ss_pred CCccCCcccCCCCCCChHHHHHHHHHccCEEecc---CCCCCC-C---------------------CeEEEEeec--CHH
Q 018665 278 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVP---GDAFGD-D---------------------TCIRISYAA--SLT 330 (352)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~---g~~~~~-~---------------------~~iRi~~~~--~~~ 330 (352)
+... + .+.+++.+.|.++ ||.+.+ ++.+.. + +.+||++.. +++
T Consensus 311 ~~~~-----~----~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~ 380 (390)
T 3b8x_A 311 KKDS-----G----VIRKQLVENLNSA-GIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFD 380 (390)
T ss_dssp CTTS-----C----CCHHHHHHHHHHT-TBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHH
T ss_pred cCcC-----c----ccHHHHHHHHHHC-CCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHH
Confidence 5210 0 1678899998865 998886 332211 0 259999987 999
Q ss_pred HHHHHHHHH
Q 018665 331 TLQAAVERI 339 (352)
Q Consensus 331 ~l~~~~~~l 339 (352)
|++++++.|
T Consensus 381 di~~i~~~l 389 (390)
T 3b8x_A 381 EIDYLREVL 389 (390)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999999876
No 213
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.94 E-value=5.1e-25 Score=205.72 Aligned_cols=314 Identities=13% Similarity=0.080 Sum_probs=225.5
Q ss_pred CccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC--------CcEEEeCChHHHHHHHHHHhcC--------------
Q 018665 2 QFVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP--------DQILVSNGAKQSILQAVLAVCS-------------- 58 (352)
Q Consensus 2 ~~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~--------~~i~~~~g~~~a~~~~~~~l~~-------------- 58 (352)
..|...++..+++ +.+++++. ..|.+... ...++++|+|+++..++.+...
T Consensus 108 ~~~~~~p~~~~lE------~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~ 181 (481)
T 4e1o_A 108 FTWASSPACTELE------MNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDAD 181 (481)
T ss_dssp SSTTTCHHHHHHH------HHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred CCcCCCcHHHHHH------HHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccc
Confidence 3466677778888 99999988 66765322 3678999999999988877532
Q ss_pred -----CCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCC------eeEEEEcCCCCCcccCCC
Q 018665 59 -----PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVYP 127 (352)
Q Consensus 59 -----~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~p~nptG~~~~ 127 (352)
+++.|+++.+.|.++...++..|.+++.+|++ .++.+|+++|+++++++ +.+|+++.++|++|.+.|
T Consensus 182 ~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~ 259 (481)
T 4e1o_A 182 ESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC 259 (481)
T ss_dssp HHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred cccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC
Confidence 45689999999999999999999999999986 55679999999999653 677888899999999988
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccccccccccceeEEEEcCh-hHHHHHH
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACN 206 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~~~~~ 206 (352)
+++|+++|+++ |+++++|++|+............. ......+.++.+.+|+++.+ ..+|+++..+ ..+....
T Consensus 260 ---l~~I~~la~~~-~~~lhvDaA~g~~~~~~~~~~~~~--~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~ 332 (481)
T 4e1o_A 260 ---LSELGPICARE-GLWLHIDAAYAGTAFLCPEFRGFL--KGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTF 332 (481)
T ss_dssp ---HHHHHHHHHHH-TCEEEEECTTGGGGGGSGGGGGGG--TTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTT
T ss_pred ---HHHHHHHHHHc-CCeEEeehhhHHHHHhChhhHHHh--cCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHh
Confidence 99999999999 999999999987543221111111 01011247788999999744 5677776654 4433211
Q ss_pred hhhhcc---------------c--c--CCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC
Q 018665 207 KIQSQF---------------T--S--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 267 (352)
Q Consensus 207 ~~~~~~---------------~--~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~ 267 (352)
.....+ + . ....+.+.++...+. .+.++++.++..++++++.+.|+++|++++..+
T Consensus 333 ~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~ 407 (481)
T 4e1o_A 333 SVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG-----VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAK 407 (481)
T ss_dssp CCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSC
T ss_pred cCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 100000 0 0 112333444444442 577888899999999999999999999999866
Q ss_pred CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHHHh
Q 018665 268 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~ 344 (352)
....++++++++.. ....++.++|.+++.+.+.++. .....++|+++.. ++++++++++.|+++.+
T Consensus 408 ~~~~~v~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 476 (481)
T 4e1o_A 408 RHLGLVVFRLKGPN----------SLTENVLKEIAKAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRDAAT 476 (481)
T ss_dssp CCSSEEEEEESSCH----------HHHHHHHHHHHHHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CceeEEEEEeCCch----------HHHHHHHHHHHhCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 66666777765321 1467889999887445554432 3335689999764 78999999999999987
Q ss_pred hh
Q 018665 345 TL 346 (352)
Q Consensus 345 ~~ 346 (352)
++
T Consensus 477 ~l 478 (481)
T 4e1o_A 477 LI 478 (481)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 214
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.94 E-value=6.6e-25 Score=212.05 Aligned_cols=314 Identities=13% Similarity=0.065 Sum_probs=213.7
Q ss_pred CCCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHH-HHhcCCeE
Q 018665 6 VSQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATP 84 (352)
Q Consensus 6 ~~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~-~~~~g~~v 84 (352)
++.-..+++ +.+|++++ ....+++++|+++++..++.+++++||+|+++.++|.++... ++..|.++
T Consensus 171 ~~~~i~e~e------~~lA~~~g------ae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~ 238 (730)
T 1c4k_A 171 HEGPAVAAE------KHAARVYN------ADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRP 238 (730)
T ss_dssp TBTHHHHHH------HHHHHHTT------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEE
T ss_pred ChHHHHHHH------HHHHHHHC------CCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEE
Confidence 334446677 99999986 345688888889999999999999999999999999999888 88899999
Q ss_pred EEecccCCC---CcccCHHHH-----HhhccCC------e----eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEE
Q 018665 85 VILPTRISE---NFLLDPKVL-----ESKLTEK------S----RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 146 (352)
Q Consensus 85 ~~i~~~~~~---~~~~d~~~l-----~~~l~~~------~----~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~l 146 (352)
++++...+. .+.+|+++| +++++++ + +++++++| |++|.+.+ +++|+++|+++ |+++
T Consensus 239 v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~-g~~l 313 (730)
T 1c4k_A 239 VYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHL-CDYI 313 (730)
T ss_dssp EEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGG-BSEE
T ss_pred EEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHc-CCeE
Confidence 998875321 123688888 8888765 4 88899998 58999999 99999999999 9999
Q ss_pred Eeccccccc-ccCCCCc-cccccC---CCCCCceEEEeccccccccccce-eEEEEcChhHH---------HHHHhh-hh
Q 018665 147 LSDEIYEHI-IYAPATH-TSFASL---PGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFV---------AACNKI-QS 210 (352)
Q Consensus 147 ivD~~~~~~-~~~~~~~-~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~~~---------~~~~~~-~~ 210 (352)
++|++|+.. .+.+... .+.... ..+.++++++.|+||.++ |++ .|+++.+++.+ ..+... ..
T Consensus 314 ivDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~ 391 (730)
T 1c4k_A 314 EFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNL 391 (730)
T ss_dssp EEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHH
T ss_pred EEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHH
Confidence 999999742 2322111 111111 222346799999999874 444 35554333221 222222 22
Q ss_pred ccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcc-cCCceecCCC---------------------
Q 018665 211 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQ--------------------- 268 (352)
Q Consensus 211 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~~~~~~~--------------------- 268 (352)
..+.+++....+++.+++... ..+...+..+++.++.+.+++.|++ ++|+.+..+.
T Consensus 392 ~~stsp~~~~iaal~aA~~~l--~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~ 469 (730)
T 1c4k_A 392 FMSTSPFYPMYAALDVNAAMQ--EGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDY 469 (730)
T ss_dssp HSCSSCCHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGG
T ss_pred hCCCCCcHHHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchh
Confidence 334567776666666555431 1223455667777788888888887 6787775432
Q ss_pred ----------------Cc-eE-----EEeecCCc--cCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEE
Q 018665 269 ----------------GA-FY-----LFIDFSTY--YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 324 (352)
Q Consensus 269 ----------------~g-~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~ 324 (352)
.+ ++ +.+..|+. ..-..+. ...++..+.+.|.++ ||.+... ....+|++
T Consensus 470 ~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~--~g~~~~~l~~~L~e~-GI~v~~~----~~~~ir~~ 542 (730)
T 1c4k_A 470 WRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYED--FGVPATIVANYLRDH-GIIPEKS----DLNSILFL 542 (730)
T ss_dssp GBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECS--SCCCHHHHHHHHHHT-TCCCSEE----CSSEEEEE
T ss_pred hccCccchhccccccCCcccccCCeEEEEEeCCcccccccccc--cCCCHHHHHHHHHHC-CcEEEEC----CCCeEEEE
Confidence 11 11 34454421 0000000 012688999999876 8887553 35788998
Q ss_pred eec--CHHHHHHHHHHHHHHHhhhC
Q 018665 325 YAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 325 ~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
++. ++++++++++.|+++.+.+.
T Consensus 543 ~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 543 MTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 887 88999999999999987663
No 215
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.93 E-value=7.3e-25 Score=204.18 Aligned_cols=313 Identities=11% Similarity=0.038 Sum_probs=222.3
Q ss_pred ccCCCCCChhhhccchhhHHHHHHHH-hcCCCCCC-------CcEEEeCChHHHHHHHHHHhcC----------------
Q 018665 3 FVRVSQGTLQMRVLWSFVQQFVINLK-ENGLSYTP-------DQILVSNGAKQSILQAVLAVCS---------------- 58 (352)
Q Consensus 3 ~y~~~~~~~~l~~~~~~~~~ia~~~~-~~~~~~~~-------~~i~~~~g~~~a~~~~~~~l~~---------------- 58 (352)
.|...++..+++ +.+++++. ..|.+... ...++|+|+|+++..++.+...
T Consensus 104 ~~~~~p~~~~lE------~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~ 177 (475)
T 3k40_A 104 TWIASPACTELE------VVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEH 177 (475)
T ss_dssp SCCCCHHHHHHH------HHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHH
T ss_pred CccCCcHHHHHH------HHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccc
Confidence 466677777888 99988888 66765321 3689999999999888877521
Q ss_pred ---CCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCC------eeEEEEcCCCCCcccCCCHH
Q 018665 59 ---PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVYPKN 129 (352)
Q Consensus 59 ---~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~------~~~i~i~~p~nptG~~~~~~ 129 (352)
+++.|+++...|.++...++..|.+++.+|++ .++ +|+++|+++++++ +.+|+++.++|++|.+.|
T Consensus 178 ~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~-- 252 (475)
T 3k40_A 178 TILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY-- 252 (475)
T ss_dssp HHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC--
T ss_pred cccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC--
Confidence 23579999999999999999999999999986 456 9999999999653 677888999999999999
Q ss_pred HHHHHHHHHHhCCCEEEEecccccccccCCCCccc-cccCCCCCCceEEEeccccccccccceeEEEEcCh-hHH-HHHH
Q 018665 130 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFV-AACN 206 (352)
Q Consensus 130 ~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~-~~~-~~~~ 206 (352)
+++|+++|+++ |+++++|++|+........... +..+ ...+.+..+.+|+++ ...++|+++.++ ..+ +.+.
T Consensus 253 -l~~I~~la~~~-~~~lhvD~A~~~~~~~~~~~~~~~~gi---~~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~~~~~ 326 (475)
T 3k40_A 253 -LDECGPVGNKH-NLWIHVDAAYAGSAFICPEYRHLMKGI---ESADSFNFNPHKWML-VNFDCSAMWLKDPSWVVNAFN 326 (475)
T ss_dssp -HHHHHHHHHHT-TCEEEEECTTGGGGGGSGGGGGGGTTG---GGCSEEEECHHHHSS-CCSSCEEEEESSGGGC-----
T ss_pred -HHHHHHHHHHh-CCeEEEeHHhHHHHHhCHhhHHHhcCc---ccCCEEEECchhccC-CCCceEEEEEeCHHHHHHHhc
Confidence 99999999999 9999999999875332211111 1111 123478899999987 445678777654 332 2221
Q ss_pred hhhhc--------------ccc--C--CChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCC
Q 018665 207 KIQSQ--------------FTS--G--ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 268 (352)
Q Consensus 207 ~~~~~--------------~~~--~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~ 268 (352)
....+ ++. + ...+.+.++...+. .+.++++.++..++++++.+.|+++|++++..+.
T Consensus 327 ~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~ 401 (475)
T 3k40_A 327 VDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG-----VENLQAHIRRHCNFAKQFGDLCVADSRFELAAEI 401 (475)
T ss_dssp ----------------------CCCGGGTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCC
T ss_pred CCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 10000 000 0 11223333333332 5678888999999999999999999999998665
Q ss_pred CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec---CHHHHHHHHHHHHHHHhh
Q 018665 269 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~---~~~~l~~~~~~l~~~~~~ 345 (352)
...++++.+++.. ....++.++|.+++++.+.++.. ....++|+++.. ++++++++++.|+++.++
T Consensus 402 ~~~iv~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 402 NMGLVCFRLKGSN----------ERNEALLKRINGRGHIHLVPAKI-KDVYFLRMAICSRFTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp BTTEEEEEESSCH----------HHHHHHHHHHHHHTSCBCEEEEE-TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCch----------HHHHHHHHHHHhCCcEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5556667765320 14678999999885555555432 235789999864 789999999999999887
Q ss_pred hCC
Q 018665 346 LRP 348 (352)
Q Consensus 346 ~~~ 348 (352)
+..
T Consensus 471 ~~~ 473 (475)
T 3k40_A 471 MEQ 473 (475)
T ss_dssp HHT
T ss_pred Hhc
Confidence 643
No 216
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.93 E-value=2.4e-24 Score=194.92 Aligned_cols=292 Identities=13% Similarity=0.142 Sum_probs=202.6
Q ss_pred CCCChhhhccchhhHHH-HHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeE
Q 018665 7 SQGTLQMRVLWSFVQQF-VINLKENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATP 84 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~i-a~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v 84 (352)
.+...+++ +++ |++++ ..+++++++|+++++..++.++ +++||+|+++.++|.++...++..|.++
T Consensus 35 ~~~~~~l~------~~~~a~~~g------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~~~G~~~ 102 (377)
T 3ju7_A 35 GPINQRFE------QTIMSGFFQ------NRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWCGLEP 102 (377)
T ss_dssp CHHHHHHH------HHHHHHTST------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHHHTTCEE
T ss_pred CHHHHHHH------HHHHHHHhC------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEE
Confidence 34456777 999 98874 2678999999999999999998 8999999999999999999999999999
Q ss_pred EEecccCCCCcccCHHHHHhhc-cCC--eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCC
Q 018665 85 VILPTRISENFLLDPKVLESKL-TEK--SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 161 (352)
Q Consensus 85 ~~i~~~~~~~~~~d~~~l~~~l-~~~--~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~ 161 (352)
+.++++. +++.+|++++++++ +++ +++|+ |+||+|.+.+ +++|.++|+ + |+++|+|++|+......
T Consensus 103 ~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~-~-~~~vi~D~a~a~g~~~~-- 171 (377)
T 3ju7_A 103 YFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK-K-GVPVVVDAAPGFGLMNG-- 171 (377)
T ss_dssp EEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH-T-TCCBEEECTTCTTCEET--
T ss_pred EEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh-c-CCEEEEECCCccCCeEC--
Confidence 9999874 46779999999988 556 88777 6788999999 889999999 9 99999999997532111
Q ss_pred ccccccCCCCCCceEEEecc--ccccccccceeEEEEc-ChhHHHHHHhhhhc------------cccCCChHHHHHHHH
Q 018665 162 HTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ------------FTSGASSISQKAGVA 226 (352)
Q Consensus 162 ~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 226 (352)
...+ .. ....+.+.|+ +|.++ +| ..|+++. ++++.++++..... ++..++.+..+.+..
T Consensus 172 ~~~~---g~-~~~d~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~ 245 (377)
T 3ju7_A 172 GMHY---GQ-DFSGMIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIA 245 (377)
T ss_dssp TEET---TT-TCSSEEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHH
T ss_pred CEec---cC-CCCcEEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHH
Confidence 0111 00 0112555554 69997 45 5677665 56777777655431 133455555444444
Q ss_pred HhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCcee-cCCCC---ce--EEEeecCCccCCcccCCCCCCChHHHHHH
Q 018665 227 ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQG---AF--YLFIDFSTYYGSEAEGFGKIENSESLCRY 300 (352)
Q Consensus 227 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~---g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
.++ .++...++.+++++.+.+.|++++++.. ..+.. .+ ++.+.+++.. +.+++.+.
T Consensus 246 ~l~-------~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~ 307 (377)
T 3ju7_A 246 TMK-------KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV-----------RNKQVIED 307 (377)
T ss_dssp HHH-------THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS-----------CHHHHHHH
T ss_pred HHH-------HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh-----------hHHHHHHH
Confidence 443 3455566667777777788877654422 11111 11 2334444321 47889999
Q ss_pred HHHccCEEeccCCC--CCC-------------------CCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 301 LLDKAQVALVPGDA--FGD-------------------DTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 301 l~~~~gi~i~~g~~--~~~-------------------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
|.++ ||.+..+.. +.. ...+|+++.. +++|+++.++.|++++.+.
T Consensus 308 L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 308 LKKQ-KIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp HHTT-TBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred HHHC-CCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 8866 898876541 100 1369999987 9999999999999888653
No 217
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.93 E-value=1.8e-24 Score=200.03 Aligned_cols=282 Identities=15% Similarity=0.132 Sum_probs=193.7
Q ss_pred hhhHHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHH-hcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCC
Q 018665 18 SFVQQFVINLKENGLSYTPDQILVSNGAKQSILQAVLA-VCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRIS 92 (352)
Q Consensus 18 ~~~~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~-l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~ 92 (352)
++++.++++++ .+++++.+++|++.+.+.+..+ ..+++|+|+++.++|.++...+ +..|.+++.++.+
T Consensus 112 ~~~~~la~~~g-----~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~-- 184 (438)
T 1wyu_A 112 EYQTMIAELAG-----LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLE-- 184 (438)
T ss_dssp HHHHHHHHHHT-----SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCB--
T ss_pred HHHHHHHHHhC-----CCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCc--
Confidence 34488888876 5667889999999554444433 2468899999999999988665 4489999999872
Q ss_pred CCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc-ccccccCCCCccccccCCCC
Q 018665 93 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI-YEHIIYAPATHTSFASLPGM 171 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~-~~~~~~~~~~~~~~~~~~~~ 171 (352)
++.+|+++ +++++++|++++| ||+|.+.| +++|+++|+++ |+++++|.. ++ +. .. ..+ ..
T Consensus 185 -~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~-g~~vivd~d~~a-~g--~~-~~~-~~---- 245 (438)
T 1wyu_A 185 -GGRTPLPE----VGEEVGAVVVQNP-NFLGALED---LGPFAEAAHGA-GALFVAVADPLS-LG--VL-KPP-GA---- 245 (438)
T ss_dssp -TTBCCCCC----CCTTEEEEEEESS-CTTSBCCC---HHHHHHHHHHT-TCEEEEECCTTG-GG--TB-CCH-HH----
T ss_pred -CCccCHHH----hCCCeEEEEEECC-CCCeEEec---HHHHHHHHHHc-CCEEEEEechhh-cc--Cc-CCC-cc----
Confidence 23577665 6678999999999 99999998 99999999999 999996632 21 11 10 011 11
Q ss_pred CCceEEEecccccc----ccccceeEEEEcChhHHHHHHhhh------------------------hccccCCCh---HH
Q 018665 172 WERTLTVNGFSKAF----AMTGWRLGYIAGPKHFVAACNKIQ------------------------SQFTSGASS---IS 220 (352)
Q Consensus 172 ~~~~i~~~s~sK~~----g~~g~~~g~l~~~~~~~~~~~~~~------------------------~~~~~~~~~---~~ 220 (352)
.+.++++.| +|.+ ++.|.++|++++++++++.+.... +....+.+. ..
T Consensus 246 ~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~ 324 (438)
T 1wyu_A 246 YGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQ 324 (438)
T ss_dssp HTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCH
T ss_pred CCCCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHH
Confidence 233477777 5543 345668999999988776542110 000111211 12
Q ss_pred HHHHHHH--hcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCCceE-EEeecCCccCCcccCCCCCCChHHH
Q 018665 221 QKAGVAA--LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY-LFIDFSTYYGSEAEGFGKIENSESL 297 (352)
Q Consensus 221 ~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
..++.++ +.. ...+.++++.++++++++++.+.|++++|+++..+...+. +.+.++ . +..++
T Consensus 325 ~~a~~aa~~l~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~-~------------~~~~~ 389 (438)
T 1wyu_A 325 LTALMGAMYLAA--LGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALP-K------------DPEAV 389 (438)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECS-S------------CHHHH
T ss_pred HHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCC-C------------CHHHH
Confidence 2222222 321 0145678888999999999999999988998876532221 223332 1 67899
Q ss_pred HHHHHHccCEEe--ccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHH
Q 018665 298 CRYLLDKAQVAL--VPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 343 (352)
Q Consensus 298 ~~~l~~~~gi~i--~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~ 343 (352)
.++|.++ ||.+ .++..+ .++++|++++. +++|++++++.|++++
T Consensus 390 ~~~L~~~-gi~v~~~~~~~~-~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 390 RRALAER-GFHGATPVPREY-GENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp HHHHHHT-TCCCCEECCTTS-CSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHC-Cceecccccccc-CCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 9999976 9988 566544 37899999995 8899999999998764
No 218
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.93 E-value=1.2e-23 Score=194.97 Aligned_cols=291 Identities=13% Similarity=0.093 Sum_probs=190.0
Q ss_pred HHHHHHHHhcCCCCCCCc---EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH--------HHHhcCCe--EEEe
Q 018665 21 QQFVINLKENGLSYTPDQ---ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE--------MARIADAT--PVIL 87 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~---i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~--------~~~~~g~~--v~~i 87 (352)
+.++++++ .+.+. .++++||++|+..++.+++++||+|+++++.|.++.. .+...|.. ++.+
T Consensus 107 ~~~a~l~g-----~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~ 181 (490)
T 2a7v_A 107 RRALEAFD-----LDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY 181 (490)
T ss_dssp HHHHHHTT-----CCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------C
T ss_pred HHHHHHcC-----CCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEec
Confidence 45555554 33432 3455688999999999999999999999998865431 22344543 3444
Q ss_pred cccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCcccc
Q 018665 88 PTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSF 165 (352)
Q Consensus 88 ~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~ 165 (352)
+++. .++.+|+++|+++++ .++++|+++.++||+ ..+ +++|.++|+++ |+++++|++|. ++...+..+.++
T Consensus 182 ~vd~-~~~~iD~d~le~~l~~~~~klIi~~~s~~~~--~~d---l~~i~~ia~~~-g~~livD~Ah~~glv~~g~~~~~~ 254 (490)
T 2a7v_A 182 KLNP-KTGLIDYNQLALTARLFRPRLIIAGTSAYAR--LID---YARMREVCDEV-KAHLLADMAHISGLVAAKVIPSPF 254 (490)
T ss_dssp CBCT-TTCSBCHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHT-TCEEEEECGGGHHHHHTTSSCCGG
T ss_pred cccc-ccCCcCHHHHHHHHhhcCCcEEEEcCCCCCC--ccc---HHHHHHHHHHc-CCEEEEccccccccccCCcCCCCC
Confidence 4442 346799999999986 478888888888874 556 99999999999 99999999976 333334322233
Q ss_pred ccCCCCCCceEEEeccccccccccceeEEEEcChh---------------HHHHHHhhhhccc-cCCChHHHHHHHHHhc
Q 018665 166 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH---------------FVAACNKIQSQFT-SGASSISQKAGVAALG 229 (352)
Q Consensus 166 ~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~---------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 229 (352)
. ..++++.|+||.+ +|.+.|+++++++ +.+.+++...... .+++.....++..++.
T Consensus 255 ~------~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~ 326 (490)
T 2a7v_A 255 K------HADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALK 326 (490)
T ss_dssp G------TCSEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHH
T ss_pred C------CCCEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHH
Confidence 1 2338999999998 4557799998764 4555554432222 3455555555555555
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE
Q 018665 230 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 308 (352)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 308 (352)
... .+.+++..+++.++++++.+.|++. |+.+..+ ...+++|++++... .+..++.+.|.+ .||.
T Consensus 327 ~~~--~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g----------~~~~~~~~~L~~-~GI~ 392 (490)
T 2a7v_A 327 QAC--TPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKG----------LDGARAERVLEL-VSIT 392 (490)
T ss_dssp HHH--SHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTT----------CCHHHHHHHHHH-TTEE
T ss_pred HHh--hhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCC----------CCHHHHHHHHHh-CCeE
Confidence 311 2344777888899999999999987 8888753 44567888876421 167777777765 5999
Q ss_pred eccCCCCC-----CCCeEEEEeec------CHHHHHHHHHHHHHHHhh
Q 018665 309 LVPGDAFG-----DDTCIRISYAA------SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 309 i~~g~~~~-----~~~~iRi~~~~------~~~~l~~~~~~l~~~~~~ 345 (352)
+..+..++ .+..+|++... +++|++++++.|.+++..
T Consensus 393 v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 393 ANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp CEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred EecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 98654333 24689997743 789999999999888863
No 219
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.92 E-value=5.1e-24 Score=198.45 Aligned_cols=297 Identities=13% Similarity=0.044 Sum_probs=200.6
Q ss_pred ChhhhccchhhHHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhc-------C------------------CC---
Q 018665 10 TLQMRVLWSFVQQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVC-------S------------------PG--- 60 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~-------~------------------~~--- 60 (352)
..+++ +.+++.+. ..+ ...+.+++++|+++|++.+++.+. + +|
T Consensus 108 ~~~l~------~~la~~l~~~~~--~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r 179 (472)
T 1ohv_A 108 PENFV------EKLRESLLSVAP--KGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPD 179 (472)
T ss_dssp BTTHH------HHHHHTGGGGCC--TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCC
T ss_pred HHHHH------HHHHHHHHHhCC--CCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCC
Confidence 45677 88888665 232 256799999999999999998763 1 24
Q ss_pred CEEEecCCCCCChHHHH-HhcCCe--------E---EEecccCCC-C------c-----ccCHHHHHhhccC------Ce
Q 018665 61 DEVIIPAPFWVSYPEMA-RIADAT--------P---VILPTRISE-N------F-----LLDPKVLESKLTE------KS 110 (352)
Q Consensus 61 ~~vl~~~~~~~~~~~~~-~~~g~~--------v---~~i~~~~~~-~------~-----~~d~~~l~~~l~~------~~ 110 (352)
++|++.++.|+++...+ ...|.. + ..++++... . + ..|++.|++++++ ++
T Consensus 180 ~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 259 (472)
T 1ohv_A 180 YSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTV 259 (472)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCE
Confidence 79999999998876544 333321 1 112222100 0 0 1268899998875 78
Q ss_pred eEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc
Q 018665 111 RLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 189 (352)
Q Consensus 111 ~~i~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 189 (352)
++|+++..+|++|. .++.+++++|.++|+++ |+++|+||+|.++.+.|. ...+...... ..+.+.|+||.+ ++|
T Consensus 260 ~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~-~~~~~~~gv~--~~~Di~t~sK~~-l~G 334 (472)
T 1ohv_A 260 AGIIVEPIQSEGGDNHASDDFFRKLRDISRKH-GCAFLVDEVQTGGGSTGK-FWAHEHWGLD--DPADVMTFSKKM-MTG 334 (472)
T ss_dssp EEEEECSSBCTTTCBCCCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSS-SSGGGGGCCS--SCCSEEEECGGG-SSE
T ss_pred EEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHh-CCEEEEeCcccCCCCCCC-chhccccCCC--CCCCEEEEcccc-ccC
Confidence 88888777888996 56789999999999999 999999999998766553 1222222110 002245899994 233
Q ss_pred ceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhccc----CC-cee
Q 018665 190 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EG-VKM 264 (352)
Q Consensus 190 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g-~~~ 264 (352)
|+++ ++++. .+.......+++.|++.+.++.++++.. .. +++.++++++++++.+.|+++ |+ +..
T Consensus 335 ---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~~~----~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~ 404 (472)
T 1ohv_A 335 ---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVINII----KR-EDLLSNAAHAGKVLLTGLLDLQARYPQFISR 404 (472)
T ss_dssp ---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHHHH----HH-TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEE
T ss_pred ---CccC-chhhc-ccccccccCccCccHHHHHHHHHHHHHH----Hh-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 6666 55542 2222334455678999999998888741 11 245566777777777777654 33 433
Q ss_pred cCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHH
Q 018665 265 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 342 (352)
Q Consensus 265 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~ 342 (352)
+.+. |.++++++++.. ....+.+.|+++ ||.+.|++ .+++|++++. +++++++++++|+++
T Consensus 405 ~~~~-g~~~~~~~~~~~-----------~~~~~~~~l~~~-Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~ 467 (472)
T 1ohv_A 405 VRGR-GTFCSFDTPDES-----------IRNKLISIARNK-GVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDI 467 (472)
T ss_dssp EEEE-TTEEEEECSSHH-----------HHHHHHHHHHHT-TEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ecCC-ceEEEEEeCChh-----------HHHHHHHHHHHC-CeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4444 455666765321 467899999875 99998853 5799998876 899999999999999
Q ss_pred Hhhh
Q 018665 343 LLTL 346 (352)
Q Consensus 343 ~~~~ 346 (352)
++++
T Consensus 468 l~~~ 471 (472)
T 1ohv_A 468 LADF 471 (472)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 8764
No 220
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=4.1e-24 Score=194.48 Aligned_cols=250 Identities=16% Similarity=0.165 Sum_probs=183.5
Q ss_pred CChhhhccchhhHHHHHHHHhcCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEEecC-CCCCChHH---------
Q 018665 9 GTLQMRVLWSFVQQFVINLKENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPE--------- 75 (352)
Q Consensus 9 ~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~~~~vl~~~-~~~~~~~~--------- 75 (352)
+..+++ +.+|++++ .+..++ ++|+++|+..++.+++++||+|+++. +.|..+..
T Consensus 60 ~~~~Le------~~lA~l~g-------~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~ 126 (409)
T 3jzl_A 60 GRDTLE------RVYATVFK-------TEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQ 126 (409)
T ss_dssp HHHHHH------HHHHHHHT-------CSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSS
T ss_pred HHHHHH------HHHHHHhC-------CCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchh
Confidence 345666 99999986 344444 89999999999999999999999998 99999885
Q ss_pred -HHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcC----CCCCcccCCCHHHHHHHHHHHHh--CCCEEEEe
Q 018665 76 -MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS----PSNPTGSVYPKNLLDEIARIVAK--HPRLLVLS 148 (352)
Q Consensus 76 -~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~----p~nptG~~~~~~~l~~l~~~~~~--~~~~~liv 148 (352)
.++..|.+++.++++. ++.+|++++++++++++++|++++ |+||+|.+.+ +++|+++|++ + |+++++
T Consensus 127 ~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~---l~~I~~la~~~~~-~~~liv 200 (409)
T 3jzl_A 127 GSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEK---IKEMIVFVKNINP-EVIVFV 200 (409)
T ss_dssp SCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHH---HHHHHHHHHHHCT-TCEEEE
T ss_pred hHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcccc---HHHHHHHHHhhCC-CCEEEE
Confidence 4467899999999863 456899999999999999999999 9999998877 9999999999 9 999999
Q ss_pred cccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhc----cccCCChHHHHH
Q 018665 149 DEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQ----FTSGASSISQKA 223 (352)
Q Consensus 149 D~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 223 (352)
|++|+.+.+... +. ..+.+++++|++|.+|.+| ...||+++++++++.+...... ...++......+
T Consensus 201 D~a~~~~~~~~~---p~-----~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~ 272 (409)
T 3jzl_A 201 DNCYGEFVEYQE---PP-----EVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLE 272 (409)
T ss_dssp ECTTCTTTSSCC---SG-----GGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHH
T ss_pred eCCcccccccCC---cc-----ccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHH
Confidence 999986542211 11 1244599999999997444 3469999999999998764322 112222211222
Q ss_pred HHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCC----ceEEEeecCCccCCcccCCCCCCChHHHHH
Q 018665 224 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLCR 299 (352)
Q Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
+... ...+..+.++..+++..+.+.|+++ |+.+.+..+ ..++.+.+++. +...++++
T Consensus 273 ~l~g-------l~~~~~r~~~~~~~a~~la~~L~~~-g~~v~p~~~~~~~~~i~~i~l~~~-----------~~~~~~~~ 333 (409)
T 3jzl_A 273 MYQG-------FFLAPHVTAQAIKGARFTAAMLAEF-GVEADPVWDAPRTDLIQSVSFHNK-----------EKMVAFAQ 333 (409)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSCCEEECSCH-----------HHHHHHHH
T ss_pred HHHH-------HhhHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCCccEEEEEEeCCH-----------HHHHHHHH
Confidence 2222 2345566777888889999999988 666643221 22455666532 15667888
Q ss_pred HHHHc
Q 018665 300 YLLDK 304 (352)
Q Consensus 300 ~l~~~ 304 (352)
.|...
T Consensus 334 ~L~~~ 338 (409)
T 3jzl_A 334 AIQAA 338 (409)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 88765
No 221
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.92 E-value=3e-24 Score=195.96 Aligned_cols=254 Identities=10% Similarity=0.063 Sum_probs=183.2
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEE--eCChHHHHHHHHHHhcCCCCEEEecC-CCCCChHH--------
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILV--SNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPE-------- 75 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~--~~g~~~a~~~~~~~l~~~~~~vl~~~-~~~~~~~~-------- 75 (352)
..+..+++ +.+|++++ ....+++ ++|+++|+..++.+++++||+|++++ +.|..+..
T Consensus 72 ~~~~~~Le------~~lA~l~g------~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~ 139 (427)
T 3i16_A 72 DIGRDSLD------AVYARVFN------TESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENS 139 (427)
T ss_dssp CHHHHHHH------HHHHHHHT------CSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCC
T ss_pred HHHHHHHH------HHHHHHhC------CcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccc
Confidence 33445667 99999986 2233333 88999999999999999999999999 99988874
Q ss_pred ---HHHhcCCeEEEecccCCCCcccCHHHHHhhcc--CCeeEEEEcC----CCCCcccCCCHHHHHHHHHHHHh--CCCE
Q 018665 76 ---MARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCS----PSNPTGSVYPKNLLDEIARIVAK--HPRL 144 (352)
Q Consensus 76 ---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~----p~nptG~~~~~~~l~~l~~~~~~--~~~~ 144 (352)
.++..|.+++.++++. ++.+|+++++++++ +++++|++++ |+||+|.+.+ +++|+++|++ + |+
T Consensus 140 ~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~d---l~~i~~la~~~~~-g~ 213 (427)
T 3i16_A 140 NMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIED---IKSIVDCVKNIRK-DI 213 (427)
T ss_dssp SSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHH---HHHHHHHHHHHCT-TS
T ss_pred hHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHH---HHHHHHHHHHhCC-CC
Confidence 3467799999999864 34589999999998 7999999999 9999988766 9999999999 9 99
Q ss_pred EEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhccccC--CCh-HH
Q 018665 145 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSG--ASS-IS 220 (352)
Q Consensus 145 ~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~~--~~~-~~ 220 (352)
++++|++|+.+.+... +. ..+.+++++|+||.+|.+| .+.|++++++++++.+.........+ .++ +.
T Consensus 214 ~livD~a~~~~~~~~~---p~-----~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~ 285 (427)
T 3i16_A 214 ICFVDNCYGEFMDTKE---PT-----DVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFG 285 (427)
T ss_dssp EEEEECTTTTTSSSSC---GG-----GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT
T ss_pred EEEEECCCccccccCC---cc-----ccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHH
Confidence 9999999986542211 11 1234599999999997444 56799999999999987743222211 121 22
Q ss_pred HHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCC----ceEEEeecCCccCCcccCCCCCCChHH
Q 018665 221 QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSES 296 (352)
Q Consensus 221 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (352)
++..++.. ...+..+.++..+++..+.+.|+++ +..+.+..+ ..++.+.+.+. +...+
T Consensus 286 --~a~~~l~g----l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~~~~~~~~~i~~i~l~~~-----------~~~~~ 347 (427)
T 3i16_A 286 --VVRSMYQG----LFLAPHISMEALKGAILCSRIMELA-GFEVMPKYDEKRSDIIQSIKFNDK-----------DKLIE 347 (427)
T ss_dssp --CHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSCEEEECSSH-----------HHHHH
T ss_pred --HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCCccEEEEEEECCH-----------HHHHH
Confidence 12222221 3445667778888888999999988 666643221 22566666432 14667
Q ss_pred HHHHHHHc
Q 018665 297 LCRYLLDK 304 (352)
Q Consensus 297 ~~~~l~~~ 304 (352)
+++.|...
T Consensus 348 f~~~l~~~ 355 (427)
T 3i16_A 348 FCKGIQTG 355 (427)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhc
Confidence 88887754
No 222
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.92 E-value=1.5e-23 Score=204.31 Aligned_cols=303 Identities=12% Similarity=0.075 Sum_probs=205.4
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcc----
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL---- 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~---- 96 (352)
+.++++++ ..+.+++++|+++++..++.+++++||+|+++.++|.++...++..|.++++++...+ +++
T Consensus 212 e~la~l~G------~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~~g~~g~ 284 (755)
T 2vyc_A 212 KYAARVFG------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-RYGIIGP 284 (755)
T ss_dssp HHHHHHHT------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-TTSCBCC
T ss_pred HHHHHHhC------CCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-ccccccc
Confidence 88888886 3456888899999999999999999999999999999999999999999999987643 222
Q ss_pred c-----CHHHHHhhccC--Ce--------eEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccccc-ccCCC
Q 018665 97 L-----DPKVLESKLTE--KS--------RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI-IYAPA 160 (352)
Q Consensus 97 ~-----d~~~l~~~l~~--~~--------~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~-~~~~~ 160 (352)
+ |++.|++++++ ++ +++++++| ||+|.+.+ +++|+++|+++ |+++++|++|+.. .+.+.
T Consensus 285 i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~-~~~livDeA~~~~~~~~~~ 359 (755)
T 2vyc_A 285 IYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKT-SDRLHFDEAWYGYARFNPI 359 (755)
T ss_dssp CCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTT-CSEEEEECTTCTTGGGCGG
T ss_pred cCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHc-CCEEEEECcCchhcccCcc
Confidence 4 99999999864 33 38888898 68999999 99999999999 9999999999743 22221
Q ss_pred --Ccccccc--CCCCCCceEEEeccccccccccce-eEEEEcChh--HH--HHHHhh-hhccccCCChHHHHHHHHHhcc
Q 018665 161 --THTSFAS--LPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKH--FV--AACNKI-QSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 161 --~~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~~-~g~l~~~~~--~~--~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
...++.. .+...++++++.|+||.+ +|.+ .|++.++++ .+ ..+... ....+.+++.+..+++.+++..
T Consensus 360 ~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~ 437 (755)
T 2vyc_A 360 YADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSM 437 (755)
T ss_dssp GTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHH
T ss_pred cCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 1112211 111245778999999987 4444 566666443 11 233222 2333456777777766666653
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcccCC---------ceecCCC---------------------------------
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGELEG---------VKMSEPQ--------------------------------- 268 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g---------~~~~~~~--------------------------------- 268 (352)
-. .+..+++.++..++.+.+++.|+++++ ++++.+.
T Consensus 438 l~--~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (755)
T 2vyc_A 438 MD--GNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPG 515 (755)
T ss_dssp HS--THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTT
T ss_pred HH--hhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcc
Confidence 11 222345566666666677777766544 4443221
Q ss_pred ----------Cc------eEEEeecCCccCCcccCC-CCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CH
Q 018665 269 ----------GA------FYLFIDFSTYYGSEAEGF-GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SL 329 (352)
Q Consensus 269 ----------~g------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~ 329 (352)
.+ ..+.+.+++. +. .+.+ ....++..+.+.|.+ +||.+... ..+.+|++++. ++
T Consensus 516 ~~~h~~~~~~~~~~~~Dp~~v~i~~~~~-~~-~G~~~~~g~~~~~l~~~L~~-~gI~~e~~----~~~~v~~~~~~g~t~ 588 (755)
T 2vyc_A 516 ESWHGFKDIPDNWSMLDPIKVSILAPGM-GE-DGELEETGVPAALVTAWLGR-HGIVPTRT----TDFQIMFLFSMGVTR 588 (755)
T ss_dssp CTTTCCTTCCTTSEEECTTEEEEECSCB-CT-TSSBCSSCCCHHHHHHHHHT-TTCCCSEE----CSSEEEEECCTTCCT
T ss_pred cccccccccCCCccccCCeEEEEEcCCC-CC-CCCccccCCcHHHHHHHHHH-CCCEEeec----CCCeEEEEECCCCCH
Confidence 12 1234444431 00 0000 001256889888876 68876442 47889999988 88
Q ss_pred HHHHHHHHHHHHHHhhh
Q 018665 330 TTLQAAVERIKKGLLTL 346 (352)
Q Consensus 330 ~~l~~~~~~l~~~~~~~ 346 (352)
++++++++.|+++.+.+
T Consensus 589 ~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 589 GKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp TTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999987655
No 223
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.86 E-value=9.2e-27 Score=214.64 Aligned_cols=293 Identities=14% Similarity=0.084 Sum_probs=200.1
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHH----hcCC--eEEEecccCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMAR----IADA--TPVILPTRIS 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~----~~g~--~v~~i~~~~~ 92 (352)
+.+++++. ..+.+++++|+++|+..+++.+. ..+++|++.+++|+++...+. ..|+ .+..++.
T Consensus 147 e~L~~~~p------~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~--- 217 (465)
T 2yky_A 147 EAVCDRFP------SIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY--- 217 (465)
Confidence 66666652 35789999999999999998753 345899999999987664333 2233 2222221
Q ss_pred CCcccCHHHHHhhcc---CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccC
Q 018665 93 ENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 168 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~---~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~ 168 (352)
.|++.|+++++ +++++|+++..++++|.. .+.+++++|.++|+++ |+++|+||++. + ..+. ......
T Consensus 218 ----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~-~-r~g~-~~a~~~- 288 (465)
T 2yky_A 218 ----NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRC-GALLIFDEVMT-S-RLSG-GGAQEM- 288 (465)
Confidence 27889999887 577887776656679965 4678899999999999 99999999999 6 3332 111111
Q ss_pred CCCCCceEEEeccccccccccceeEEEEcChhHHHHHHh-----hhhccccCCChHHHHHHHHHhcccCCChHHHHHHHH
Q 018665 169 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 243 (352)
Q Consensus 169 ~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (352)
.+....+.|++|.+| +|+|+||+++++++++.+.. .....+++.|++.++++.++++... + +.+.+
T Consensus 289 ---~gv~pDi~t~sK~lg-~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~---~--~~~~~ 359 (465)
T 2yky_A 289 ---LGISADLTTLGKYIG-GGMSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIY---T--RQAAS 359 (465)
Confidence 122234668999999 69999999999999998866 2344567899999999988887521 1 23455
Q ss_pred HHHHHHHHHHHHhccc---CCceecCCCCceEEEeecCCccCCcccCCC--CCCChHHHHHHHHHccCEEeccCCCCCCC
Q 018665 244 AFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFG--KIENSESLCRYLLDKAQVALVPGDAFGDD 318 (352)
Q Consensus 244 ~~~~~~~~l~~~l~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~gi~i~~g~~~~~~ 318 (352)
+++++.+++.+.|+++ .++....+..|.++++.+++.....+.... .......+.+.|+++ ||.+.|+. +.
T Consensus 360 ~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-GV~v~p~~-~~-- 435 (465)
T 2yky_A 360 DLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRK-GIYLAPRG-MY-- 435 (465)
Confidence 6666666666666654 123223345677788877641000000000 000255788888865 99999875 21
Q ss_pred CeEEEEeecCHHHHHHHHHHHHHHHhhhC
Q 018665 319 TCIRISYAASLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 319 ~~iRi~~~~~~~~l~~~~~~l~~~~~~~~ 347 (352)
. +++..+++|+++++++|++++++++
T Consensus 436 ~---~s~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 436 A---LSLEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 1 6666799999999999999998764
No 224
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=1.6e-23 Score=191.18 Aligned_cols=251 Identities=11% Similarity=0.094 Sum_probs=181.5
Q ss_pred CCCChhhhccchhhHHHHHHHHhcCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEEecC-CCCCChHH-------
Q 018665 7 SQGTLQMRVLWSFVQQFVINLKENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPE------- 75 (352)
Q Consensus 7 ~~~~~~l~~~~~~~~~ia~~~~~~~~~~~~~~i~~---~~g~~~a~~~~~~~l~~~~~~vl~~~-~~~~~~~~------- 75 (352)
..+..+++ +.+|++++ .+..++ ++|+++|+..++.+++++||+|++++ +.|..+..
T Consensus 73 ~~g~~~Le------~~lA~l~g-------~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~ 139 (427)
T 3hvy_A 73 DIGRDSLD------RVYANIFN-------TESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDS 139 (427)
T ss_dssp CHHHHHHH------HHHHHHHT-------CSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTT
T ss_pred chhHHHHH------HHHHHHhC-------CCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccc
Confidence 33455677 99999986 344455 78999999999999999999999998 99988773
Q ss_pred ----HHHhcCCeEEEecccCCCCcccCHHHHHhhcc--CCeeEEEEcC----CCCCcccCCCHHHHHHHHHHHHh--CCC
Q 018665 76 ----MARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCS----PSNPTGSVYPKNLLDEIARIVAK--HPR 143 (352)
Q Consensus 76 ----~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~----p~nptG~~~~~~~l~~l~~~~~~--~~~ 143 (352)
.++..|.+++.++. .++.+|+++++++++ +++++|++++ |+||+|.+.+ +++|+++|++ + |
T Consensus 140 ~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~d---l~~i~~ia~~~~~-g 212 (427)
T 3hvy_A 140 KKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAE---IAEIIKSIREVNE-N 212 (427)
T ss_dssp CCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHH---HHHHHHHHHHHCS-S
T ss_pred hhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHH---HHHHHHHHHHhCC-C
Confidence 45678999999988 234689999999998 7999999999 9999988766 9999999999 9 9
Q ss_pred EEEEecccccccccCCCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhhhhcccc----CCCh
Q 018665 144 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTS----GASS 218 (352)
Q Consensus 144 ~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~~~~~~~----~~~~ 218 (352)
+++++|++|+.+.+.. .+. ..+.+++++|+||.+|.+| .+.|++++++++++.+......... +++.
T Consensus 213 ~~livD~a~~~~~~~~---~p~-----~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~ 284 (427)
T 3hvy_A 213 VIVFVDNCYGEFVEEK---EPT-----DVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTF 284 (427)
T ss_dssp SEEEEECTTCTTTSSS---CGG-----GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCT
T ss_pred CEEEEECCccccccCC---CCc-----ccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCH
Confidence 9999999998654221 111 1234599999999997444 4679999999999998774322221 2212
Q ss_pred HHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcccCCceecCCCC----ceEEEeecCCccCCcccCCCCCCCh
Q 018665 219 ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENS 294 (352)
Q Consensus 219 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
.....+... ...+..+.++..++...+.+.|+++ |+.+.+..+ ..++.+.+.+. +..
T Consensus 285 ~~a~~~~~g-------l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~~~~~~~~li~~~~l~~~-----------~~~ 345 (427)
T 3hvy_A 285 GVMRSLYEG-------LFMAPHVTIEAVKGAVFCARIMELA-GFDVLPKYNDKRTDIIQAIKFNDE-----------KKL 345 (427)
T ss_dssp TCHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSEEEEECSSH-----------HHH
T ss_pred HHHHHHHHh-------HhHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCCceEEEEEeCCCH-----------HHH
Confidence 212222222 2334566777888888999999987 666643322 22566666432 145
Q ss_pred HHHHHHHHHc
Q 018665 295 ESLCRYLLDK 304 (352)
Q Consensus 295 ~~~~~~l~~~ 304 (352)
.++++.|...
T Consensus 346 ~~f~~~l~~~ 355 (427)
T 3hvy_A 346 IDFIKGIQTA 355 (427)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHhccc
Confidence 6777777653
No 225
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.91 E-value=2.1e-23 Score=191.31 Aligned_cols=250 Identities=15% Similarity=0.186 Sum_probs=178.6
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC-CCCCChHHHH----------HhcCCeEEEecc
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPEMA----------RIADATPVILPT 89 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~-~~~~~~~~~~----------~~~g~~v~~i~~ 89 (352)
+.++++++ .+....+++++ |+++|+..++.+++++||+|+++. +.|..+...+ +..|.+++.++.
T Consensus 72 ~~la~~~g---~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~ 147 (431)
T 3ht4_A 72 KVYADVFG---AEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPL 147 (431)
T ss_dssp HHHHHHTT---CSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCB
T ss_pred HHHHHHhC---CCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCC
Confidence 66666654 22112223344 778999999999999999999998 9999988654 458999999998
Q ss_pred cCCCCcccCHHHHHhhccCCeeEEEEc-CCCCCcccCCCHHHHHHHHHHHHh--CCCEEEEecccccccccCCCCccccc
Q 018665 90 RISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 90 ~~~~~~~~d~~~l~~~l~~~~~~i~i~-~p~nptG~~~~~~~l~~l~~~~~~--~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
+. ++.+|+++|++++++++++|+++ +|+||+|...+.+++++|+++|++ + |+++|+|++|+.+.+... +.
T Consensus 148 ~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~-~~~livDea~~~~~~~~~---~~- 220 (431)
T 3ht4_A 148 TE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKP-DVVVFVDNCYGEFIEEQE---PC- 220 (431)
T ss_dssp CT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT-TCEEEEECTTCTTSSSCC---GG-
T ss_pred CC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCC-CCEEEEeCCChhhccCCC---cc-
Confidence 74 46789999999999999999998 589999999999999999999999 9 999999999998654322 11
Q ss_pred cCCCCCCceEEEecccccccc-ccceeEEEEcChhHHHHHHhhhhcccc----CCChHHHHHHHHHhcccCCChHHHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGPKHFVAACNKIQSQFTS----GASSISQKAGVAALGLGYAGGEVVSKM 241 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~-~g~~~g~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (352)
. .+.+++++|++|.+|. .+...|++++++++++.+......... +++.....++...+ ..+..+
T Consensus 221 ~----~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-------~~~~~~ 289 (431)
T 3ht4_A 221 H----VGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF-------FLAPHV 289 (431)
T ss_dssp G----TTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-------HHHHHH
T ss_pred c----cCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHh-------hhHHHH
Confidence 1 1345999999999863 124459999999999988764432221 22221122233332 334556
Q ss_pred HHHHHHHHHHHHHHhcccCCceecCC----CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHc
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 304 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (352)
.++..++...+.+.|+++ |+.+.+. ..+.++.+.+++. +...++++.|.+.
T Consensus 290 ~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~~-----------~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 290 AGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDDK-----------DRMIAFCQAIQYA 344 (431)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCCH-----------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCCH-----------HHHHHHHHHHHhc
Confidence 677778888888989887 6665422 2233556666532 1466788887765
No 226
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.91 E-value=2e-23 Score=187.13 Aligned_cols=285 Identities=12% Similarity=0.081 Sum_probs=204.5
Q ss_pred HHHHHHHHhcCCCCCC-CcEEE-eCChHHHHHHHHHHhcCC--CCEEEecCCCCCCh--HHHHHhcCCeEEEecccCCCC
Q 018665 21 QQFVINLKENGLSYTP-DQILV-SNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSY--PEMARIADATPVILPTRISEN 94 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~-~~i~~-~~g~~~a~~~~~~~l~~~--~~~vl~~~~~~~~~--~~~~~~~g~~v~~i~~~~~~~ 94 (352)
+.++++++ ++. ++|++ ++|+|++++.++..+..+ ||++++....+++. ...++..|..++.++.+ .+
T Consensus 65 ~~la~ll~-----~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~ 137 (377)
T 3e77_A 65 NLVRELLA-----VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GS 137 (377)
T ss_dssp HHHHHHHT-----CCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SS
T ss_pred HHHHHHhC-----CCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CC
Confidence 88888886 443 57888 589999999999998764 88988776655543 35667788888887775 33
Q ss_pred cccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCc
Q 018665 95 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 174 (352)
Q Consensus 95 ~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
+..++++++..+++++++|.+++..|.+|...| + +|+++ |+++++|.+++. +..+..+.. .+
T Consensus 138 ~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~p---i-----i~~~~-~~~~~vD~~q~~----g~~~id~~~----~~- 199 (377)
T 3e77_A 138 YTKIPDPSTWNLNPDASYVYYCANETVHGVEFD---F-----IPDVK-GAVLVCDMSSNF----LSKPVDVSK----FG- 199 (377)
T ss_dssp SCSCCCGGGCCCCTTCSCEEEESEETTTTEECS---S-----CCCCT-TCCEEEECTTTT----TSSCCCGGG----CS-
T ss_pred cCCCCChHHhccCCCccEEEEeCccCchheEch---h-----hhccC-CCEEEEEccccc----CCCCCchhh----cC-
Confidence 446778888888889999999988889999999 4 36788 999999999986 333333332 22
Q ss_pred eEEEeccccccccccceeEEEEcChhHHHHHH----------hh--hhccccCCChHHHHHHHHHhcccCCChH-HHHHH
Q 018665 175 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN----------KI--QSQFTSGASSISQKAGVAALGLGYAGGE-VVSKM 241 (352)
Q Consensus 175 ~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 241 (352)
+++.|.+|.+|.+| +|+++.++++++.+. .. ......+++....+++.++++.- ... .++++
T Consensus 200 -~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l--~~~GG~~~i 274 (377)
T 3e77_A 200 -VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWI--KNNGGAAAM 274 (377)
T ss_dssp -EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHH--HHTTHHHHH
T ss_pred -EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHH--HHccCHHHH
Confidence 57789999998556 677777665432211 11 11223567888888888887741 134 68899
Q ss_pred HHHHHHHHHHHHHHhcccCCceecC----CCCceEEEeecCCccCCcccCCCCCCC-hHHHHHHHHHccCEEeccCCCCC
Q 018665 242 VKAFRERRDFLVKSFGELEGVKMSE----PQGAFYLFIDFSTYYGSEAEGFGKIEN-SESLCRYLLDKAQVALVPGDAFG 316 (352)
Q Consensus 242 ~~~~~~~~~~l~~~l~~~~g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~gi~i~~g~~~~ 316 (352)
.++.+++.+++.+.|++++|+.+.. .+++..+.+.+++.... .+ ...+.+.+.+ .||.+.+|..
T Consensus 275 ~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~--------~~~~~~~l~~l~~-~Gi~~~~g~~-- 343 (377)
T 3e77_A 275 EKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGD--------DALEKRFLDKALE-LNMLSLKGHR-- 343 (377)
T ss_dssp HHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCC--------HHHHHHHHHHHHH-TTEESCBCCT--
T ss_pred HHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCc--------hhHHHHHHHHHHH-CCcEEeCCCC--
Confidence 9999999999999999988887542 13344566777653100 01 1356666665 4999988753
Q ss_pred CCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 317 DDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 317 ~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
..+.+|+|+.. +++|++++++.|++++++.
T Consensus 344 ~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 344 SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 35679999987 8999999999999998764
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.89 E-value=6.1e-22 Score=178.53 Aligned_cols=286 Identities=10% Similarity=0.071 Sum_probs=200.5
Q ss_pred ChhhhccchhhHHHHHHHHhcCCCCCC-CcEEE-eCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEE
Q 018665 10 TLQMRVLWSFVQQFVINLKENGLSYTP-DQILV-SNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPV 85 (352)
Q Consensus 10 ~~~l~~~~~~~~~ia~~~~~~~~~~~~-~~i~~-~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~ 85 (352)
+.+.| +.++++++ ++. ++|++ |+|+|++++.++..+++++|++++....+++ +...++..| ++.
T Consensus 74 ~~~ar------~~la~ll~-----~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~ 141 (386)
T 3qm2_A 74 AEEAE------QDFRDLLN-----IPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQ 141 (386)
T ss_dssp CHHHH------HHHHHHHT-----CCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEE
T ss_pred HHHHH------HHHHHHhC-----CCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeE
Confidence 44566 89999997 433 46888 6999999999999999999988755444433 335567788 899
Q ss_pred Eeccc-CCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCcc
Q 018665 86 ILPTR-ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 163 (352)
Q Consensus 86 ~i~~~-~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~ 163 (352)
.++.+ .+.+..+++++++.++++++++|.+++..|.+|.. .| +++|. + |+++++|.+++. |..+.
T Consensus 142 ~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p---i~~i~-----~-g~~~~vDa~qs~----g~~pi 208 (386)
T 3qm2_A 142 IIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE---TPDFG-----P-EVVVTADFSSTI----LSAPL 208 (386)
T ss_dssp EEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC---CCCCC-----T-TCCEEEECTTTT----TSSCC
T ss_pred EEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc---hhhhc-----C-CCEEEEEccccc----CCCCC
Confidence 99886 12333367888888999999999998888899996 88 55553 7 999999999875 33334
Q ss_pred ccccCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHH----------hh--hhccccCCChHHHHHHHHHhccc
Q 018665 164 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN----------KI--QSQFTSGASSISQKAGVAALGLG 231 (352)
Q Consensus 164 ~~~~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~l~~~ 231 (352)
.+..+ + +++.|.+|++|.+| +|+++.++++++.+. .. ......++|.....++.++++..
T Consensus 209 dv~~~----~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~ 280 (386)
T 3qm2_A 209 DVSRY----G--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWL 280 (386)
T ss_dssp CGGGC----S--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHH
T ss_pred Ccccc----C--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHH
Confidence 44332 2 56789999998444 788888776532111 11 11122467878888888887741
Q ss_pred CCChH-HHHHHHHHHHHHHHHHHHHhcccCCce-ec-C--CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccC
Q 018665 232 YAGGE-VVSKMVKAFRERRDFLVKSFGELEGVK-MS-E--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 306 (352)
Q Consensus 232 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~-~~-~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 306 (352)
... .++++.++.+++++++.+.|+++ ++. .. . .+....+.+.+++.. ...++...|.+ .|
T Consensus 281 --~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~-~g 345 (386)
T 3qm2_A 281 --KAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADNT-----------LDKVFLEESFA-AG 345 (386)
T ss_dssp --HHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSGG-----------GHHHHHHHHHH-TT
T ss_pred --HHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCcc-----------ccHHHHHHHHH-CC
Confidence 133 58888999999999999999987 542 21 1 123345666766420 22567777665 49
Q ss_pred EEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 307 VALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 307 i~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
|.+..|..+ .+.+|+|+.. +++|++++++.|+++.++
T Consensus 346 I~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 346 LHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp EECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 998877543 4569999987 899999999999999875
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=1.3e-21 Score=174.84 Aligned_cols=279 Identities=12% Similarity=0.105 Sum_probs=197.5
Q ss_pred HHHHHHHHhcCCCCC-CCcEEE-eCChHHHHHHHHHHhcCCCCEEEecCCCCC--ChHHHHHhcCCeEEEecccCCCCcc
Q 018665 21 QQFVINLKENGLSYT-PDQILV-SNGAKQSILQAVLAVCSPGDEVIIPAPFWV--SYPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~-~~~i~~-~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~--~~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
+.++++++ ++ +++|++ |+|+|++++.++..+. ++|++++....++ .+...++..|.++..++.+.++.+.
T Consensus 57 ~~la~ll~-----~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~ 130 (361)
T 3m5u_A 57 EKAKKLYE-----LNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFD 130 (361)
T ss_dssp HHHHHHHT-----CCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSC
T ss_pred HHHHHHhC-----CCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCC
Confidence 88888886 43 457887 9999999999999988 6776532222222 2345667889999999987544222
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceE
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 176 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i 176 (352)
++++. + +++++++|.+++..|.+|...|. | + ++ |+++++|.+++. +..+..+.. -.+
T Consensus 131 ~~~~~--~-l~~~t~lv~~~~~e~~tG~~~~~-----i---~-~~-~~~~~vD~~q~~----g~~~id~~~------~d~ 187 (361)
T 3m5u_A 131 HIPRV--E-FSDNADYAYICSNNTIYGTQYQN-----Y---P-KT-KTPLIVDASSDF----FSRKVDFSN------IAL 187 (361)
T ss_dssp SCCCC--C-CCTTSSEEEEESEETTTTEECSS-----C---C-CC-SSCEEEECGGGT----TSSCCCCTT------EEE
T ss_pred cCChh--h-cCCCCCEEEEeCCCCCcceeCCc-----c---c-cc-CCEEEEEccccc----CCCCCCccc------CCE
Confidence 45555 4 88899999998888899998772 2 2 37 999999999986 332333321 237
Q ss_pred EEeccccccccccceeEEEEcChhHHHHHHh-----------h--hhccccCCChHHHHHHHHHhcccCCChH-HHHHHH
Q 018665 177 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNK-----------I--QSQFTSGASSISQKAGVAALGLGYAGGE-VVSKMV 242 (352)
Q Consensus 177 ~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 242 (352)
++.|.+|++|.+| +|+++.++++.+.+.. . ......+++.....++.++++... .. .++++.
T Consensus 188 ~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~--~~gG~~~i~ 263 (361)
T 3m5u_A 188 FYGGVQKNAGISG--LSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLL--NQGGLDKVH 263 (361)
T ss_dssp EEEETTTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH--TTTCHHHHH
T ss_pred EEEechhccCCCc--cEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHH--HccCHHHHH
Confidence 8899999998444 7899999988776643 0 112224678888888888877421 23 578888
Q ss_pred HHHHHHHHHHHHHhcccCCc-eecCC---CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCC
Q 018665 243 KAFRERRDFLVKSFGELEGV-KMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 318 (352)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~g~-~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~ 318 (352)
++.+++.+++.+.|++++++ ....+ +....+.+.+|+..+ -..++...|.++ ||.+.+|... .
T Consensus 264 ~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~----------~~~~~~~~L~~~-gI~~~~g~~~--~ 330 (361)
T 3m5u_A 264 EKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKD----------LEPLFVKEAEEA-GMIGLKGHRI--L 330 (361)
T ss_dssp HHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTT----------HHHHHHHHHHHT-TEECCBCCTT--T
T ss_pred HHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchh----------hhHHHHHHHHHC-CCEEecCCCc--c
Confidence 99999999999999998666 44321 233446666664100 124677777654 9999876432 3
Q ss_pred CeEEEEeec--CHHHHHHHHHHHHHHHhh
Q 018665 319 TCIRISYAA--SLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 319 ~~iRi~~~~--~~~~l~~~~~~l~~~~~~ 345 (352)
+.+|+|+.. +++|++++++.|+++.++
T Consensus 331 g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 331 GGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp CSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 679999987 899999999999999875
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.88 E-value=2.7e-21 Score=177.05 Aligned_cols=288 Identities=14% Similarity=0.100 Sum_probs=183.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHHHHH-h-----cCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMAR-I-----ADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~~~~-~-----~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
..+.+++++||++|++.+++... ...++|+....+|++.....- . .......+|. .|++.+++.+
T Consensus 142 ~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l 214 (454)
T 4ao9_A 142 QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQI 214 (454)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHH
T ss_pred CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHH
Confidence 56899999999999999998753 234688888888876432111 1 1112222221 2778888877
Q ss_pred c---CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCCCCCCceEEEeccc
Q 018665 107 T---EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 182 (352)
Q Consensus 107 ~---~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 182 (352)
+ +++.+|++...++..|.+ ++++++++|.++|++| |+++|+||++.+ ..|... ......-.+| +.+++
T Consensus 215 ~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~-g~lLI~DEV~tG--R~G~~~-a~e~~gv~PD----i~t~g 286 (454)
T 4ao9_A 215 ERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQV-GALLVFDEVMTS--RLAPHG-LANKLGIRSD----LTTLG 286 (454)
T ss_dssp HHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHH-TCEEEEECTTGG--GGSTTC-HHHHHTCCCS----EEEEE
T ss_pred hhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhc-CCEEEEECCCcC--CCcccc-chhccCCCCc----EEEec
Confidence 5 467778877767667755 5678999999999999 999999999984 333321 1111111112 56788
Q ss_pred cccccccceeEEEEcChhHHHHHHhh----hhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 018665 183 KAFAMTGWRLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 258 (352)
Q Consensus 183 K~~g~~g~~~g~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 258 (352)
|.+| +|+++|.+.+++++++.+... ....+++.|++.++++.++|+.-.. ++..+++.+.-+..++.|.+.+++
T Consensus 287 K~lg-gG~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~~ 364 (454)
T 4ao9_A 287 KYIG-GGMSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT-PEAAGALAERGEALRARLNALCAN 364 (454)
T ss_dssp GGGG-TTSSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccC-CCCcceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc-cChhHHHHHHHHHHHHHHHHHHhh
Confidence 9998 889999999999998877532 2344678899999999999876321 343444444334344444444444
Q ss_pred cCCceecCCCCceEEEeecCCccCCcccCCCCCCC---hHHHHHHHHHccCEEeccCCCCCCCCeEEEEeecCHHHHHHH
Q 018665 259 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN---SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAA 335 (352)
Q Consensus 259 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~~~~~l~~~ 335 (352)
. ++......-|.++.+.+.+........... .+ ...+...|+++ ||++.|. +.+.++++.|++|||++
T Consensus 365 ~-~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~-~d~~~~~~~~~~ll~~-Gv~~~p~------~~~~~s~~~T~~dId~~ 435 (454)
T 4ao9_A 365 E-GVAMQFTGIGSLMNAHFVQGDVRSSEDLAA-VDGRLRQLLFFHLLNE-DIYSSPR------GFVVLSLPLTDADIDRY 435 (454)
T ss_dssp H-TBSCEEEEETTEEEEESCCSCCCSGGGGTT-CCHHHHHHHHHHHHHT-TEECCTT------CEEECCTTCCHHHHHHH
T ss_pred C-CCCEEEeeeceEEEEEEecCCCCCHHHHHh-hhHHHHHHHHHHHHHC-CEEEcCC------CCEEEeCCCCHHHHHHH
Confidence 3 322221223444555543221111110000 01 23566777876 9998774 34566666799999999
Q ss_pred HHHHHHHHhhhCC
Q 018665 336 VERIKKGLLTLRP 348 (352)
Q Consensus 336 ~~~l~~~~~~~~~ 348 (352)
+++|++++.++..
T Consensus 436 l~al~~~l~~~~a 448 (454)
T 4ao9_A 436 VAAIGSFIGGHGA 448 (454)
T ss_dssp HHHHHHHHHHSGG
T ss_pred HHHHHHHHHhccc
Confidence 9999999988654
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.87 E-value=1.1e-20 Score=181.09 Aligned_cols=299 Identities=11% Similarity=0.144 Sum_probs=195.3
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCccc---
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL--- 97 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~--- 97 (352)
+.+|++++ ....+++++|++.++..++.+++++||.|+++.++|.++...+...|.++++++...+ .+.+
T Consensus 202 ~~lA~~fG------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~-~~gi~~~ 274 (715)
T 3n75_A 202 QYIARVFN------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRN-AYGILGG 274 (715)
T ss_dssp HHHHHHHT------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBC-TTCCBCC
T ss_pred HHHHHHhC------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccc-ccccccC
Confidence 99999997 4556777788889999999999999999999999999999999999999999987643 3433
Q ss_pred ------CHHHHHhhccC--Cee---EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCCCCcccc
Q 018665 98 ------DPKVLESKLTE--KSR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSF 165 (352)
Q Consensus 98 ------d~~~l~~~l~~--~~~---~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~~~~~~~ 165 (352)
|++.|++++++ +++ ++++++| |++|.+.+ +++|.++|+++ + +++||+|+... +.+.. +..
T Consensus 275 i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~-~--livDEAH~~~~~f~~~~-~~~ 346 (715)
T 3n75_A 275 IPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK-S--IHFDSAWVPYTNFSPIY-EGK 346 (715)
T ss_dssp CCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS-E--EEEECTTCTTGGGSGGG-TTS
T ss_pred cccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC-c--EEEccccccccccCCcc-ccc
Confidence 89999999963 334 7899999 99999999 88888888766 5 78999998542 22211 111
Q ss_pred ccCCC--CCCce-EEEeccccccccccc-eeEEEEcChhH-HHHHHhh-hhccccCCChHHHHHHHHHhcccCCChHHHH
Q 018665 166 ASLPG--MWERT-LTVNGFSKAFAMTGW-RLGYIAGPKHF-VAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVS 239 (352)
Q Consensus 166 ~~~~~--~~~~~-i~~~s~sK~~g~~g~-~~g~l~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 239 (352)
..+.. ..+.+ +++.|+||+++ |+ ..|++.++.++ ...+... ...++.++|.+..+++.++++.- .....+
T Consensus 347 ~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~--~~~~g~ 422 (715)
T 3n75_A 347 CGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMM--KGNAGK 422 (715)
T ss_dssp STTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH--SHHHHH
T ss_pred cccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH--HhhccH
Confidence 11111 11332 56999999985 33 46787775542 2223322 23345678888887777776531 112344
Q ss_pred HHHHHHHHHHHHHHHHhcccCC------ceecCCC-----------------------Cce------EEEeecCCccCCc
Q 018665 240 KMVKAFRERRDFLVKSFGELEG------VKMSEPQ-----------------------GAF------YLFIDFSTYYGSE 284 (352)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~g------~~~~~~~-----------------------~g~------~~~~~~~~~~~~~ 284 (352)
++++++.++.+.+++.|+++++ +.+..+. .+. -+.+.+++..
T Consensus 423 ~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~--- 499 (715)
T 3n75_A 423 RLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGME--- 499 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBC---
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCC---
Confidence 5666667777777777765532 2332211 011 1233333210
Q ss_pred ccC-C-CCCCChHHHHHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 285 AEG-F-GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 285 ~~~-~-~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
..| + .....+..+.+.|.+ +||.+.-. ....+-+-++. ++++++++++.|.++.+.+
T Consensus 500 ~~G~~~~~Gi~g~~~~~~L~~-~~I~~E~~----d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 500 KDGTMSDFGIPASIVAKYLDE-HGIVVEKT----GPYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp TTSCBCSSCCCHHHHHHHHHH-TTCCCSEE----ETTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCCcHHHHHHHHHH-CCCEEEec----CCCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 000 0 001267788888865 48877553 24444444443 8899999999998876654
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.86 E-value=4.2e-20 Score=169.84 Aligned_cols=291 Identities=13% Similarity=0.128 Sum_probs=189.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCEEEecCCCCCChHH-HHHhcC-------------CeEEEecccCCC----Cc
Q 018665 36 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPE-MARIAD-------------ATPVILPTRISE----NF 95 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~--~~~~~vl~~~~~~~~~~~-~~~~~g-------------~~v~~i~~~~~~----~~ 95 (352)
.+.+++++||++|++.+++... ....+|+....+|++... .+...+ ..+..+|.+... ..
T Consensus 125 ~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~ 204 (456)
T 4atq_A 125 AKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPE 204 (456)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTT
T ss_pred CcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCc
Confidence 4579999999999999998742 234688888888877653 332221 234444443210 00
Q ss_pred ccCHH-------HHHhhcc-CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccc
Q 018665 96 LLDPK-------VLESKLT-EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 166 (352)
Q Consensus 96 ~~d~~-------~l~~~l~-~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~ 166 (352)
..+.+ .+++.+. +++.++++...+...|.. .|++.+++|.++|++| |+++|+||++.++..+|.. ....
T Consensus 205 ~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~-gillI~DEV~tG~GRtG~~-~a~e 282 (456)
T 4atq_A 205 ITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEK-GIVFIADEVQSGFCRTGEW-FAVD 282 (456)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGG
T ss_pred ccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhc-CCceEecccccccCCcccc-cccc
Confidence 11222 2333332 367777777777767765 5677999999999999 9999999999998777752 2222
Q ss_pred cCCCCCCceEEEeccccccccccceeEEEEcChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHH
Q 018665 167 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 246 (352)
Q Consensus 167 ~~~~~~~~~i~~~s~sK~~g~~g~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 246 (352)
...-.+| +.+++|.+| +|+++|.+++++++.+.+.......+++.|+++.+++.+.|+... + +.+.++.+
T Consensus 283 ~~gv~PD----ivt~gK~lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~--~---~~l~~~~~ 352 (456)
T 4atq_A 283 HEGVVPD----IITMAKGIA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTME--Q---HDLNGRAR 352 (456)
T ss_dssp GTTCCCS----EEEECGGGG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHH--H---TTHHHHHH
T ss_pred ccCCCCc----hhhhhhccc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHh--h---ccHHHHHH
Confidence 2222122 566789998 899999999999998888776677889999999999999997521 1 12233333
Q ss_pred HHHHHHHHHhcc----cC-----CceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCC
Q 018665 247 ERRDFLVKSFGE----LE-----GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 317 (352)
Q Consensus 247 ~~~~~l~~~l~~----~~-----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~ 317 (352)
+.-+++.+.|++ ++ -+.-+. ..|.++.+++......... ......+.+.++++ |+.+.+++. .
T Consensus 353 ~~g~~l~~~L~~l~~~~~~~~~~~v~~VR-G~Gl~~giel~~~~~~~~~----~~~~~~v~~~~~~~-Gvl~~~~g~--~ 424 (456)
T 4atq_A 353 HIEELALGKLRELAAELSAGGGSVVGDIR-GRGAMLAIELVQPGSKEPN----AELTKAVAAACLKE-GVIILTCGT--Y 424 (456)
T ss_dssp HHHHHHHHHHHHHHHHCC-----CEEEEE-EETTEEEEEEBCTTSCCBC----HHHHHHHHHHHHHT-TEECEEECT--T
T ss_pred HHHHHHHHHHHHHHHhcccccCCceEEee-ecceEEEEEEecCCCCCcC----HHHHHHHHHHHHHC-CCEEEecCC--C
Confidence 333344443332 21 122222 2355666776432111000 00245788888876 899876532 2
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 318 DTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 318 ~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+|+.++. +++++++++++|++++++.
T Consensus 425 ~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 425 GNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp SCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 5789999887 9999999999999999764
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.85 E-value=3.3e-19 Score=164.48 Aligned_cols=293 Identities=12% Similarity=0.077 Sum_probs=186.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--------CCCCEEEecCCCCCChH-HHHHhcCC-----------eEEEecccCC--
Q 018665 35 TPDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYP-EMARIADA-----------TPVILPTRIS-- 92 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~--------~~~~~vl~~~~~~~~~~-~~~~~~g~-----------~v~~i~~~~~-- 92 (352)
.-+.+++++||++|++.+++... ....+|+....+|++.. ..+...|. .+..++.+..
T Consensus 127 ~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~ 206 (473)
T 4e3q_A 127 DSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWR 206 (473)
T ss_dssp SSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHH
T ss_pred CccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccc
Confidence 34689999999999999998742 12357888887777644 33333221 2223332210
Q ss_pred --CCcc-------cCHHHHHhhcc----CCeeEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccC
Q 018665 93 --ENFL-------LDPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 158 (352)
Q Consensus 93 --~~~~-------~d~~~l~~~l~----~~~~~i~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~ 158 (352)
.... ...+++++.+. +++.++++...+...|.. +|++.+++|.++|++| |+++|.||++.+|..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~-gilLI~DEV~tGfGRt 285 (473)
T 4e3q_A 207 YGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKY-DIPVISDEVICGFGRT 285 (473)
T ss_dssp HSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCCEEEECTTTSSSTT
T ss_pred cccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhccc-ceEEeccCccccCCcc
Confidence 0000 01234444442 356677777777777765 5677999999999999 9999999999999777
Q ss_pred CCCccccccCCCCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh-------hhccccCCChHHHHHHHHHhcc
Q 018665 159 PATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGL 230 (352)
Q Consensus 159 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~ 230 (352)
|... ........+| +.+++|.++ +| +++|.+++++++.+.+... .+.++++.|+++.+++.+.|+.
T Consensus 286 G~~f-a~e~~gv~PD----i~t~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~ 359 (473)
T 4e3q_A 286 GNTW-GCVTYDFTPD----AIISSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDV 359 (473)
T ss_dssp SSSC-HHHHTTCCCS----EEEECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHH
T ss_pred cchh-HHHhcCCCCC----hHHhccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhh
Confidence 6532 2122222122 556789998 66 8999999999998887543 2445778999999999999875
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcc---cCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCE
Q 018665 231 GYAGGEVVSKMVKAFRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 307 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 307 (352)
-. -+.+.++.++.-+++.+.|++ .|.+.-+.. .|.++.+++......+..-.........+.+.++++ |+
T Consensus 360 i~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG-~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~-Gl 432 (473)
T 4e3q_A 360 VM-----NEGLAENVRRLAPRFEERLKHIAERPNIGEYRG-IGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDL-GL 432 (473)
T ss_dssp HH-----HSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TE
T ss_pred hc-----cccHHHHHHHHHHHHHHHHHHHhcCCCeeEEee-cceEEEEEEecCccccccccccHHHHHHHHHHHHHC-Cc
Confidence 21 122333444444455555443 345443332 355566665322111100000001256788888876 99
Q ss_pred EeccCCCCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhh
Q 018665 308 ALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 346 (352)
Q Consensus 308 ~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~ 346 (352)
.+.+. .+.+|++++. +++++++++++|+++++++
T Consensus 433 l~~~~-----g~~i~l~PPL~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 433 ICRPL-----GQSVVLCPPFILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp ECEEE-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 98874 4689998876 9999999999999998875
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.80 E-value=4.9e-19 Score=173.80 Aligned_cols=230 Identities=13% Similarity=0.113 Sum_probs=150.7
Q ss_pred HHHHhhcc--------CCeeEEEEcCC-CCCcccC-CCHHHHHHHHHHHHhCCCEEEEecccccccccCCCCccccccCC
Q 018665 100 KVLESKLT--------EKSRLLILCSP-SNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 169 (352)
Q Consensus 100 ~~l~~~l~--------~~~~~i~i~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~~~~~~~~~~ 169 (352)
+.|++.++ +++++|++... ++..|.. +|.+.+++|.++|++| |+++|+||++.+++.+|... ......
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~-gilLI~DEV~tGfGRtG~~f-a~e~~g 654 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNR-KIPVIFDEVFTGFWRLGVET-TTELLG 654 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHT-TCCEEEECTTTTTTTTSBSS-THHHHS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHc-CCeEEEEcCccccccCCCch-hhHhcC
Confidence 56777664 35667777775 7777765 5788999999999999 99999999999987777532 222222
Q ss_pred CCCCceEEEecccccccccc-ceeEEEEcChhHHHHHHhh------hhccccCCChHHHHHHHHHhcccCCChHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 242 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g-~~~g~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 242 (352)
..++ +.+++|.++ +| +++|++++++++++.+... ...++++.|+++++++.++++.-.. ++..+++.
T Consensus 655 v~PD----iitlsK~L~-gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~-~~l~~~~~ 728 (831)
T 4a0g_A 655 CKPD----IACFAKLLT-GGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKD-PETNHNIT 728 (831)
T ss_dssp SCCS----EEEECGGGG-TTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHC-TTTCTTBC
T ss_pred CCCc----EEEEecccc-cCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHh-hHHHHHHH
Confidence 1112 447999998 67 7999999999998887542 1345678899999999998875111 11111111
Q ss_pred ---HHHHH-HHHHHHHHhcccCCceecCCCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCCCC
Q 018665 243 ---KAFRE-RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 318 (352)
Q Consensus 243 ---~~~~~-~~~~l~~~l~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~~~ 318 (352)
+++++ ..+.+.+.+++.|.+..+... |.++.+++...... ..+ ....+.++.+.|+++ |+.+.|. .
T Consensus 729 ~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~--~~~-~~~~a~~~~~~l~e~-Gv~v~p~-----g 798 (831)
T 4a0g_A 729 SQGKTLRELWDEELVQQISSHSAVQRVVVI-GTLFALELKADASN--SGY-ASLYAKSLLIMLRED-GIFTRPL-----G 798 (831)
T ss_dssp TTSSBBCCCSCHHHHHHHHHSTTEEEEEEE-TTEEEEEEC------------CHHHHHHHHHHHHT-TEECCCB-----T
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeEeec-ccEEEEEEecCccc--ccc-chHHHHHHHHHHHHC-CcEEEec-----C
Confidence 11111 012344445555565555433 45566665321100 000 000356788888876 9999885 4
Q ss_pred CeEEEEeec--CHHHHHHHHHHHHHHHhhhC
Q 018665 319 TCIRISYAA--SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 319 ~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~ 347 (352)
+.+|++++. ++++|++++++|+++++++.
T Consensus 799 ~~lrl~pp~~~t~e~id~~~~~l~~~l~~l~ 829 (831)
T 4a0g_A 799 NVIYLMCGPCTSPEICRRLLTKLYKRLGEFN 829 (831)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 799999765 99999999999999998764
No 234
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.79 E-value=2.2e-17 Score=147.81 Aligned_cols=308 Identities=18% Similarity=0.175 Sum_probs=202.3
Q ss_pred HHHHH-HHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCEEEecCCCCCChHHHHHhcCCeEEEecccCC-CC
Q 018665 21 QQFVI-NLKENGLSYTPDQILVSNGAKQSILQAVLAVCSP----GDEVIIPAPFWVSYPEMARIADATPVILPTRIS-EN 94 (352)
Q Consensus 21 ~~ia~-~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~----~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~-~~ 94 (352)
+.++. ++...|++ .....++++|+|.++..++.+.+++ ++.|+++..+|.+...++...|.++++++...+ +.
T Consensus 119 n~l~ld~L~~~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~ 197 (501)
T 3hl2_A 119 NSLVLDIIKLAGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDE 197 (501)
T ss_dssp HHHHHHHHHHTTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTE
T ss_pred HHHHHHHHHHcCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccc
Confidence 44433 44466765 4567999999998888777776653 499999999999999999999999999987422 34
Q ss_pred cccCHHHHHhhccC---CeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccc-cCCCCccccccCC
Q 018665 95 FLLDPKVLESKLTE---KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLP 169 (352)
Q Consensus 95 ~~~d~~~l~~~l~~---~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~-~~~~~~~~~~~~~ 169 (352)
..+|++.+++++++ +..++++.++ +|..+.+-+ +++|+++|++| |++++||+||+... +....+.+...+.
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~-gIpllVDeAhGah~~~~~~lp~sA~~~G 273 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANY-DIPHIVNNAYGVQSSKCMHLIQQGARVG 273 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTCTTCHHHHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHc-CCeEEEeCcchhhhhhhhhhHHHHHhcC
Confidence 67899999999964 3344454444 554456677 99999999999 99999999998532 1011111222222
Q ss_pred CCCCceEEEeccccccccccceeEEEE-cChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 248 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g~~~g~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 248 (352)
.-++++.|.+|.+- .-++.+.+. -++++++.+..... ...+.++.....+..+.. +.+.++++.++..++
T Consensus 274 ---rAD~vVqS~HK~ll-vpIGG~ii~~~d~e~l~~~~~~yP--Gr~S~Spsldl~~tLL~l---Gr~Gy~~ll~e~~el 344 (501)
T 3hl2_A 274 ---RIDAFVQSLDKNFM-VPVGGAIIAGFNDSFIQEISKMYP--GRASASPSLDVLITLLSL---GSNGYKKLLKERKEM 344 (501)
T ss_dssp ---CCCEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHHTSC--SCBCSHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred ---CCcEEEecccccce-eecCceEEEeCCHHHHHHHHHhCC--CCCCCcHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 13489999999984 333444443 36677777644221 112344444455555554 367778899999999
Q ss_pred HHHHHHHhccc---CCceecCC-CCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEE----eccCC-------
Q 018665 249 RDFLVKSFGEL---EGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA----LVPGD------- 313 (352)
Q Consensus 249 ~~~l~~~l~~~---~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~----i~~g~------- 313 (352)
.+++.+.|+++ .|-+++.. ....-+.+.+....... ......+.-.|..+ +|. |.+|.
T Consensus 345 a~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~------~~~~t~~gs~Lf~r-~vsG~Rvv~~~~~~~i~g~ 417 (501)
T 3hl2_A 345 FSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHR------DKAVTQLGSMLFTR-QVSGARVVPLGSMQTVSGY 417 (501)
T ss_dssp HHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTT------SCHHHHHHHHHHHT-TCCSCEEECTTCCEEETTE
T ss_pred HHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccc------cccHHHHHHHHHhc-CCCcceeecCCCceEECCe
Confidence 99999998875 24444432 23333444443321000 01355777788876 442 33443
Q ss_pred ---CCCC------CCeEEEEeec--CHHHHHHHHHHHHHHHhhhCCC
Q 018665 314 ---AFGD------DTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 349 (352)
Q Consensus 314 ---~~~~------~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~~ 349 (352)
.|+. ..|+-++.+. +.+|++.++++|.+++.+++.+
T Consensus 418 ~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 418 TFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp EESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred eecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2321 3577777776 9999999999999999988663
No 235
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.76 E-value=2.2e-16 Score=140.76 Aligned_cols=277 Identities=13% Similarity=0.091 Sum_probs=177.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH--------HhcC--CeEEEecccCCCCcccCHHHHHhhcc
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA--------RIAD--ATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~--------~~~g--~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+|.. .|++.|+..++.+++++||+|+..+..+.++...- ...| +++..++++. .+..+|.|++++...
T Consensus 123 NVQP-~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~-~t~~IDyd~~~~~A~ 200 (490)
T 3ou5_A 123 NVQP-YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTAR 200 (490)
T ss_dssp ECCC-SSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEET-TTTEECHHHHHHHHH
T ss_pred CCCc-CCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCC-CCCcccHHHHHHHHh
Confidence 4444 45668888999999999999998887766654321 1122 3555666664 445699999999886
Q ss_pred -CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc-ccccCCCCccccccCCCCCCceEEEecccccc
Q 018665 108 -EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAF 185 (352)
Q Consensus 108 -~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 185 (352)
.+|++|++-...+| ..+| .+++.++|++- |.++++|-+|. ++...|..+.++. .. .++++|.+|+|
T Consensus 201 ~~kPklIi~G~SaY~--r~id---~~~~reIAd~v-GA~Lm~DmAHiaGLVA~g~~psP~~-~A-----DvVTtTTHKTL 268 (490)
T 3ou5_A 201 LFRPRLIIAGTSAYA--RLID---YARMREVCDEV-KAHLLADMAHISGLVAAKVIPSPFK-HA-----DIVTTTTHKTL 268 (490)
T ss_dssp HHCCSEEEECCSSCC--SCCC---HHHHHHHHHHH-TCEEEEECGGGHHHHHTTSSCCGGG-TC-----SEEEEESSSTT
T ss_pred hcCCCeEEECCccCc--cccC---HHHHHHHHhhc-ccEEEechhhhhhhhcccccCCccc-cc-----eEEeccccccc
Confidence 48999887555554 4567 88999999999 99999999987 4444454444443 22 28999999998
Q ss_pred ccccceeEEEEcCh---------------hHHHHHHhhhhccccCCChHHHHHH-HHHhcccCCChHHHHHHHHHHHHHH
Q 018665 186 AMTGWRLGYIAGPK---------------HFVAACNKIQSQFTSGASSISQKAG-VAALGLGYAGGEVVSKMVKAFRERR 249 (352)
Q Consensus 186 g~~g~~~g~l~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (352)
.|.|.|.|++++ ++.+++.+..-+...+.+.+...++ +.++... ....+.+-.+++.++.
T Consensus 269 --rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea--~~p~fk~Ya~qVv~NA 344 (490)
T 3ou5_A 269 --RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQA--CTPMFREYSLQVLKNA 344 (490)
T ss_dssp --CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHH
T ss_pred --cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHH--HhHhHHHHHHHHHHHH
Confidence 788999999765 4556666543333333333333333 3334321 1345677778888899
Q ss_pred HHHHHHhcccCCceecC-CCCceEEEeecCCccCCcccCCCCCCChHHHHHHHHHccCEEeccCCCCC-----CCCeEEE
Q 018665 250 DFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRI 323 (352)
Q Consensus 250 ~~l~~~l~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~i~~g~~~~-----~~~~iRi 323 (352)
+.|.+.|.+. |+.++. ......+++++.... .+..+..+.|. +.||.+.-....+ .+..|||
T Consensus 345 kaLA~~L~~~-G~~vvsGgTdnHlvLvDl~~~g----------~tG~~ae~~Le-~agItvNkN~iP~D~sp~~~SGiRi 412 (490)
T 3ou5_A 345 RAMADALLER-GYSLVSGGTDNHLVLVDLRPKG----------LDGARAERVLE-LVSITANKNTCPGDRSAITPGGLRL 412 (490)
T ss_dssp HHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----------CCHHHHHHHHH-HTTEECEEECCTTCCCSSSCSEEEE
T ss_pred HHHHHHHHhC-CCeeecCCCCceEEEEeccccC----------CCHHHHHHHHH-HcCcEECCCCCCCCCCCCCCCeeEE
Confidence 9999999987 998874 344556777875431 15555555544 5699875433222 2457999
Q ss_pred Eeec------CHHHHHHHHHHHHHHHh
Q 018665 324 SYAA------SLTTLQAAVERIKKGLL 344 (352)
Q Consensus 324 ~~~~------~~~~l~~~~~~l~~~~~ 344 (352)
..+. .++|+++..+.|.+++.
T Consensus 413 GTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 413 GAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp ESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 8864 67888888888877764
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.72 E-value=6.6e-16 Score=140.01 Aligned_cols=308 Identities=18% Similarity=0.166 Sum_probs=189.8
Q ss_pred HHHHHHHH-hcCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCEEEecCCCCCChHHHHHhcCCeEEEecccC-CCC
Q 018665 21 QQFVINLK-ENGLSYTPDQILVSNGAKQSILQAVLAVCSP----GDEVIIPAPFWVSYPEMARIADATPVILPTRI-SEN 94 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~----~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~-~~~ 94 (352)
+.+..++. ..|.+ +....++++|+|++...++.+.+++ ++.|+++..+|.+...++...|+.+++++... +..
T Consensus 101 ~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~ 179 (450)
T 3bc8_A 101 NSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDE 179 (450)
T ss_dssp HHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred HHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCcc
Confidence 55555555 44543 3456789999986555555554443 78999999999999999999999999997642 245
Q ss_pred cccCHHHHHhhccC---CeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEecccccccccCCC-CccccccCC
Q 018665 95 FLLDPKVLESKLTE---KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLP 169 (352)
Q Consensus 95 ~~~d~~~l~~~l~~---~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~~~~~~-~~~~~~~~~ 169 (352)
+.+|++.|++++++ +..++++.+| ++.+|.+-| +++|+++|++| |++++||+||+....... .+.+....
T Consensus 180 ~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~-gi~l~VD~A~G~~~~~~~~l~~~a~~~- 254 (450)
T 3bc8_A 180 LRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANY-DIPHVVNNAYGLQSSKCMHLIQQGARV- 254 (450)
T ss_dssp EECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTTTTCHHHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHC-CCeEEEECCCchhhhhhHhHHHHHhcc-
Confidence 67999999999964 3455566666 456678888 99999999999 999999999985321100 00011111
Q ss_pred CCCCceEEEeccccccccccceeEEEEc-ChhHHHHHHhhhhccccCCChHHHHHHHHHhcccCCChHHHHHHHHHHHHH
Q 018665 170 GMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 248 (352)
Q Consensus 170 ~~~~~~i~~~s~sK~~g~~g~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 248 (352)
..-++++.|.+|.+. .....+++.. +++.++.+..... ....+++........+.. ..+.+++..++..++
T Consensus 255 --~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~--g~~s~SpsL~l~~~l~~~---G~~g~~~~i~~~~~~ 326 (450)
T 3bc8_A 255 --GRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYP--GRASASPSLDVLITLLSL---GCSGYRKLLKERKEM 326 (450)
T ss_dssp --SCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSC--SCBCSHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred --cCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhh--cCCcccHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 122378899999986 4456677765 6666666544211 112233333333333332 255666776677777
Q ss_pred HHHHHHHhcccC---CceecCCC-CceEEEeecCCccCCcccCCCCCCChHHHHHHHHHcc--CEEeccC--------C-
Q 018665 249 RDFLVKSFGELE---GVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA--QVALVPG--------D- 313 (352)
Q Consensus 249 ~~~l~~~l~~~~---g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--gi~i~~g--------~- 313 (352)
.+++.+.+++++ |..+.... .+.-..+.++..... .. .+...+.-.+.... |..+.+. .
T Consensus 327 a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~--~~----~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~ 400 (450)
T 3bc8_A 327 FVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGH--HD----KAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHT 400 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSS--SS----CHHHHHHHHHHHTTCCSCEEECSCCEEEETTEE
T ss_pred HHHHHHHHHhhHHhcCceecCCccCCCcceeeccccccc--cc----CCCceeEEEecCCCCccceeeecccccchhHHH
Confidence 888888887776 77666432 111112222211000 00 14445555554431 3333210 0
Q ss_pred --------CCCCCCeEEEEeec--CHHHHHHHHHHHHHHHhhhCC
Q 018665 314 --------AFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 314 --------~~~~~~~iRi~~~~--~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.++...++-+.++. +++|+++++++|+++.++++.
T Consensus 401 l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 401 FRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp EETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11234566666665 889999999999998776643
No 237
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=87.01 E-value=3.4 Score=30.81 Aligned_cols=123 Identities=11% Similarity=0.088 Sum_probs=75.0
Q ss_pred hhHHHHHHHHhcCCCCCCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcc
Q 018665 19 FVQQFVINLKENGLSYTPDQILVSNGA--KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 96 (352)
Q Consensus 19 ~~~~ia~~~~~~~~~~~~~~i~~~~g~--~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~ 96 (352)
|.+++.+-+.--|..++...++++-+. -..+..+...+.+.|=+++.+..+ ...++..|+++..+.-..+++..
T Consensus 7 ~~~A~~Ka~~aag~~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GT----a~~L~~~Gi~v~~v~k~~egg~~ 82 (143)
T 2yvq_A 7 GHTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEAT----SDWLNANNVPATPVAWPSQEGQN 82 (143)
T ss_dssp CCHHHHHHHTSCSCCCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHH----HHHHHHTTCCCEEECCGGGC---
T ss_pred HHHHHHHHHHhcCCCCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECchH----HHHHHHcCCeEEEEEeccCCCcc
Confidence 446666555522444443348887665 555666677777777777777644 45678899999888754332110
Q ss_pred cCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 97 LDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 97 ~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
-+...+.+.++++..-+|++.|.. . ..+..+-..|.+.|-++ +++++..
T Consensus 83 ~~~~~i~d~i~~g~i~lVInt~~~-~--~~~~~d~~~iRR~Av~~-~IP~~T~ 131 (143)
T 2yvq_A 83 PSLSSIRKLIRDGSIDLVINLPNN-N--TKFVHDNYVIRRTAVDS-GIPLLTN 131 (143)
T ss_dssp --CBCHHHHHHTTSCCEEEECCCC-C--GGGHHHHHHHHHHHHHT-TCCEECS
T ss_pred cccccHHHHHHCCCceEEEECCCC-C--CcCCccHHHHHHHHHHh-CCCeEcC
Confidence 011245666655555556566643 1 23356688999999999 9999854
No 238
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=78.36 E-value=20 Score=27.20 Aligned_cols=101 Identities=10% Similarity=0.001 Sum_probs=64.8
Q ss_pred cEEEeCChHHHHHHHHHHh---cC--CCCEEEecCCCCCChHHHHHhcCC---eEEEecccCCCCcccCHHHHHhhccCC
Q 018665 38 QILVSNGAKQSILQAVLAV---CS--PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK 109 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l---~~--~~~~vl~~~~~~~~~~~~~~~~g~---~v~~i~~~~~~~~~~d~~~l~~~l~~~ 109 (352)
++.....+...+..+.-.+ .. .+..|+.-.|-+..+...++..|+ ++..+...... -.+...|++++.+
T Consensus 48 Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~---daLwa~EqALrsG 124 (161)
T 1oft_A 48 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNA---AALALSCEALRLG 124 (161)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTT---HHHHHHHHHHHTT
T ss_pred EEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChH---HHHHHHHHHHhcC
Confidence 5666655545444333333 22 456677778888899999999997 45555543222 2467788888877
Q ss_pred eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 110 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 110 ~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
....|+..... ++....++|--.|+.. +.+.+
T Consensus 125 ~~~aVl~Wl~~-----l~~~~~RRLqlAAe~g-~~~~f 156 (161)
T 1oft_A 125 RSHTVVSWLEP-----LSRAARKQLSRAAQLG-QAQSL 156 (161)
T ss_dssp CEEEEEECCSS-----CCHHHHHHHHHHHHHT-TCEEE
T ss_pred CccEEEECCCc-----CChHHHHHHHHHHHhC-CCeEE
Confidence 76666665442 5677788888888777 65544
No 239
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=75.77 E-value=19 Score=25.71 Aligned_cols=101 Identities=10% Similarity=-0.003 Sum_probs=63.1
Q ss_pred cEEEeCChHHHHHHHHHH---hcC--CCCEEEecCCCCCChHHHHHhcCC---eEEEecccCCCCcccCHHHHHhhccCC
Q 018665 38 QILVSNGAKQSILQAVLA---VCS--PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK 109 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~---l~~--~~~~vl~~~~~~~~~~~~~~~~g~---~v~~i~~~~~~~~~~d~~~l~~~l~~~ 109 (352)
+++....+...+..+.-. +.+ .+.-|+...|.+..+...++..|+ ++..+..... .-.+...|++++.+
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~---~d~lwa~EqaLrsg 82 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN---AAALALSCEALRLG 82 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSH---HHHHHHHHHHHHHT
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCc---HHHHHHHHHHHhcC
Confidence 455555555544444433 333 456788888888899999999986 4555554321 12356678888766
Q ss_pred eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 110 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 110 ~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
....|+..+.. ++....++|--.|+.. +.+.+
T Consensus 83 ~~~aVl~wl~~-----l~~~~~RRLqlAA~~g-~~~~~ 114 (119)
T 1ofu_X 83 RSHTVVSWLEP-----LSRAARKQLSRAAQLG-QAQSL 114 (119)
T ss_dssp CEEEEEECCSS-----CCHHHHHHHHHHHHHH-TCEEE
T ss_pred CccEEEECCCc-----CChHHHHHHHHHHHhC-CCeEE
Confidence 66666655432 5667788888878776 65443
No 240
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=71.09 E-value=11 Score=21.79 Aligned_cols=29 Identities=21% Similarity=0.119 Sum_probs=25.2
Q ss_pred eEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 320 CIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 320 ~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
.+|||+.. +..+.+++..+|-+++.++..
T Consensus 3 rvrisitartkkeaekfaailikvfaelgy 32 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAELGY 32 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHhCc
Confidence 57999988 889999999999999988754
No 241
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=64.57 E-value=45 Score=27.92 Aligned_cols=75 Identities=11% Similarity=0.140 Sum_probs=49.8
Q ss_pred CCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 68 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
|+|.++..+.+....++..+-++.+ .-++.++++++.+.+.+++.+. | ++.++.+++.+.|+++ ++.++
T Consensus 51 ~vy~sl~el~~~~~~D~viI~tP~~----~~~~~~~ea~~~Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~-gv~li 119 (288)
T 2nu8_A 51 PVFNTVREAVAATGATASVIYVPAP----FCKDSILEAIDAGIKLIITITE----G--IPTLDMLTVKVKLDEA-GVRMI 119 (288)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHH-TCEEE
T ss_pred eccCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEEE
Confidence 4566666776644566655554432 3567778888778887665333 3 2456688999999999 99888
Q ss_pred eccccc
Q 018665 148 SDEIYE 153 (352)
Q Consensus 148 vD~~~~ 153 (352)
-.++.+
T Consensus 120 GPNc~G 125 (288)
T 2nu8_A 120 GPNTPG 125 (288)
T ss_dssp CSSCCE
T ss_pred ecCCcc
Confidence 666544
No 242
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=63.73 E-value=41 Score=27.14 Aligned_cols=97 Identities=13% Similarity=0.073 Sum_probs=54.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc------C
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------E 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------~ 108 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+- -|.+.+++.++ .
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 445566666655544566677778888888766544444455555677777776653 25555555543 1
Q ss_pred CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 109 KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 109 ~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+...+|.+.-..+.+. -.+.+++++..+
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4555544333332222 345555555544
No 243
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=62.43 E-value=30 Score=28.79 Aligned_cols=97 Identities=8% Similarity=0.029 Sum_probs=55.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC------
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------ 108 (352)
+..-+++|.+++..=..+...|.+.|-+|++.+-.-.......+..|.+...+..+- -|.+++++.++.
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS-----ANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 445556665555444566677888888888776444445556667777777776652 255555555431
Q ss_pred CeeEEEEcCC-CCCccc--CCCHHHHHHHHHH
Q 018665 109 KSRLLILCSP-SNPTGS--VYPKNLLDEIARI 137 (352)
Q Consensus 109 ~~~~i~i~~p-~nptG~--~~~~~~l~~l~~~ 137 (352)
+.. ++++|. .++.+- -++.++++++.++
T Consensus 103 ~iD-iLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 103 RID-VLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp CEE-EEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 334 344444 233222 2466677777654
No 244
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=61.29 E-value=26 Score=28.79 Aligned_cols=69 Identities=13% Similarity=0.033 Sum_probs=40.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 93 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLAE 93 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHHH
Confidence 4445566665554444556667778888887765443334445556677777776653 25555555443
No 245
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=59.13 E-value=47 Score=26.90 Aligned_cols=68 Identities=10% Similarity=-0.046 Sum_probs=33.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 73 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALA 73 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHH
Confidence 445566666655444556667778888887765444444445555555666665542 24555555543
No 246
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=58.84 E-value=20 Score=28.76 Aligned_cols=95 Identities=4% Similarity=-0.002 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCC---ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCc
Q 018665 46 KQSILQAVLAVCSPGDEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 122 (352)
Q Consensus 46 ~~a~~~~~~~l~~~~~~vl~~~~~~~---~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt 122 (352)
|+++..+.+ +...+.++++..|.-. +-.....+.|.....+++. +.+++.+.+..+...|+|...++
T Consensus 43 T~Llr~~~r-~~~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~-------~~~di~~~i~~~~dvV~IDEaQF-- 112 (219)
T 3e2i_A 43 EELIRRLRR-GIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINIS-------KASEIMTHDLTNVDVIGIDEVQF-- 112 (219)
T ss_dssp HHHHHHHHH-HHHTTCCEEEEEEC-----------CBTTBCCEEEEES-------SGGGGGGSCCTTCSEEEECCGGG--
T ss_pred HHHHHHHHH-HHHcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeC-------CHHHHHHHHhcCCCEEEEechhc--
Confidence 335555433 3344566777766432 2234566777777666654 23445554555677888777665
Q ss_pred ccCCCHHHHHHHHHHHHhCCCEEEEeccccccc
Q 018665 123 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 155 (352)
Q Consensus 123 G~~~~~~~l~~l~~~~~~~~~~~livD~~~~~~ 155 (352)
++++.++.+.+++ +. |+.+|+=.-..+|
T Consensus 113 ---f~~~~v~~l~~la-~~-gi~Vi~~GLd~DF 140 (219)
T 3e2i_A 113 ---FDDEIVSIVEKLS-AD-GHRVIVAGLDMDF 140 (219)
T ss_dssp ---SCTHHHHHHHHHH-HT-TCEEEEEEESBCT
T ss_pred ---CCHHHHHHHHHHH-HC-CCEEEEeeccccc
Confidence 5566677777777 67 9999976655443
No 247
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=58.83 E-value=21 Score=30.83 Aligned_cols=76 Identities=8% Similarity=0.153 Sum_probs=51.2
Q ss_pred CCCCCChHHHHHhc-CCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 67 APFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 67 ~~~~~~~~~~~~~~-g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
-|+|.+..++.... +.++..+-++.. .-.+.+.+++. .+.+.+++..... +.+..+++.++|+++ ++
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G~------~e~~~~~l~~~a~~~-g~ 132 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGI------PEALTRKLIKKADQK-GV 132 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCC------CHHHHHHHHHHHHHH-TC
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc-CC
Confidence 47888888877764 456555544422 13467777776 6788877755443 346688999999999 99
Q ss_pred EEEeccccc
Q 018665 145 LVLSDEIYE 153 (352)
Q Consensus 145 ~livD~~~~ 153 (352)
.+|-=++.+
T Consensus 133 rliGPNc~G 141 (334)
T 3mwd_B 133 TIIGPATVG 141 (334)
T ss_dssp EEECSSCCC
T ss_pred EEEccCCcc
Confidence 999555543
No 248
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=57.81 E-value=19 Score=30.42 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=49.0
Q ss_pred CCCCChHHHHHhcC-CeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEE
Q 018665 68 PFWVSYPEMARIAD-ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 146 (352)
Q Consensus 68 ~~~~~~~~~~~~~g-~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~l 146 (352)
|+|.++..+.+..+ .++..+-++.+ .-++.++++++.+++.+++.+. | ++.++.+++.+.|+++ ++.+
T Consensus 57 ~vy~sl~el~~~~~~~DvaIi~vp~~----~~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~-gi~v 125 (297)
T 2yv2_A 57 PVYDSVKEALAEHPEINTSIVFVPAP----FAPDAVYEAVDAGIRLVVVITE----G--IPVHDTMRFVNYARQK-GATI 125 (297)
T ss_dssp EEESSHHHHHHHCTTCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHH-TCEE
T ss_pred eeeCCHHHHhhcCCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEE
Confidence 45666666666333 55544443321 3567788888778886665333 2 2456688999999999 9988
Q ss_pred Eecccccc
Q 018665 147 LSDEIYEH 154 (352)
Q Consensus 147 ivD~~~~~ 154 (352)
+-.++.+.
T Consensus 126 iGPNc~Gi 133 (297)
T 2yv2_A 126 IGPNCPGA 133 (297)
T ss_dssp ECSSSCEE
T ss_pred EcCCCCee
Confidence 86775543
No 249
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=57.27 E-value=46 Score=27.50 Aligned_cols=98 Identities=14% Similarity=0.114 Sum_probs=52.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC-----
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----- 108 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~----- 108 (352)
++...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 3445566666555444556667778888888765443334445555666676666542 255555555531
Q ss_pred -CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 109 -KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 109 -~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+...+|.+.-....+. ..+.+++++..+
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 4555444333332222 245555655544
No 250
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=56.62 E-value=28 Score=29.27 Aligned_cols=50 Identities=8% Similarity=0.016 Sum_probs=34.3
Q ss_pred hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 73 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
....++..|++.+.+++.....|.. .+.+.++++++.|.++ |+.+|+|-.
T Consensus 37 ~~~~lk~~G~N~VRi~~~~~~~w~~----------------------------~~~~~ld~~v~~a~~~-Gi~Vild~h 86 (302)
T 1bqc_A 37 AFADIKSHGANTVRVVLSNGVRWSK----------------------------NGPSDVANVISLCKQN-RLICMLEVH 86 (302)
T ss_dssp HHHHHHHTTCSEEEEEECCSSSSCC----------------------------CCHHHHHHHHHHHHHT-TCEEEEEEG
T ss_pred HHHHHHHcCCCEEEEEccCCcccCC----------------------------CCHHHHHHHHHHHHHC-CCEEEEEec
Confidence 4456677888888887653211110 1357799999999999 999998853
No 251
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=55.69 E-value=46 Score=27.20 Aligned_cols=66 Identities=17% Similarity=0.103 Sum_probs=36.9
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-......++..+......++. |.+.+++.+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~-------~~~~v~~~~ 90 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFS-------CETGIMAFI 90 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTT-------SHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCC-------CHHHHHHHH
Confidence 345566666655544455666777778777766544444455556666655544432 455555544
No 252
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=55.43 E-value=12 Score=31.56 Aligned_cols=76 Identities=9% Similarity=0.129 Sum_probs=48.9
Q ss_pred CCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 68 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
|+|.++..+.+....++..+-++.+ .-++.++++++.+.+.+++.+. | ++.++.+++.+.|+++ ++.++
T Consensus 57 ~vy~sl~el~~~~~~Dv~ii~vp~~----~~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~-gi~vi 125 (294)
T 2yv1_A 57 PVFDTVKEAVKETDANASVIFVPAP----FAKDAVFEAIDAGIELIVVITE----H--IPVHDTMEFVNYAEDV-GVKII 125 (294)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCHH----HHHHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHH-TCEEE
T ss_pred eeeCCHHHHhhcCCCCEEEEccCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEEE
Confidence 4466666666644555554443321 3467777777778886665333 2 2456688999999999 99888
Q ss_pred ecccccc
Q 018665 148 SDEIYEH 154 (352)
Q Consensus 148 vD~~~~~ 154 (352)
-.++.+.
T Consensus 126 GPNc~Gi 132 (294)
T 2yv1_A 126 GPNTPGI 132 (294)
T ss_dssp CSSCCEE
T ss_pred cCCCcee
Confidence 7775543
No 253
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=54.99 E-value=16 Score=30.77 Aligned_cols=76 Identities=9% Similarity=0.061 Sum_probs=49.0
Q ss_pred CCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 68 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
|+|.+...+.+....++..+-++++ .-++.++++++.+.+.+++.+. | ++.++.+++.+.|+++ ++.++
T Consensus 51 ~vy~sl~el~~~~~~Dv~Ii~vp~~----~~~~~~~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~-gi~vi 119 (288)
T 1oi7_A 51 PVYDTVKEAVAHHEVDASIIFVPAP----AAADAALEAAHAGIPLIVLITE----G--IPTLDMVRAVEEIKAL-GSRLI 119 (288)
T ss_dssp EEESSHHHHHHHSCCSEEEECCCHH----HHHHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHH-TCEEE
T ss_pred EeeCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEEE
Confidence 4455666666644555544443321 3466777777778886665433 3 2456688999999999 99888
Q ss_pred ecccccc
Q 018665 148 SDEIYEH 154 (352)
Q Consensus 148 vD~~~~~ 154 (352)
-.++.+.
T Consensus 120 gPNc~Gi 126 (288)
T 1oi7_A 120 GGNCPGI 126 (288)
T ss_dssp ESSSCEE
T ss_pred eCCCCeE
Confidence 7776543
No 254
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=54.18 E-value=85 Score=25.30 Aligned_cols=68 Identities=13% Similarity=0.096 Sum_probs=40.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+. -|.+.+++.++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV-----TSEKDVQTALA 78 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHH
Confidence 445666666554444556667777787777665444445555555566666666542 24555555553
No 255
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=53.96 E-value=49 Score=26.85 Aligned_cols=98 Identities=8% Similarity=0.020 Sum_probs=52.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC-----
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----- 108 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~----- 108 (352)
++...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+- -|.+.+++.++.
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHHHHc
Confidence 3445667776665544566677778888887765443334445555566666666542 255555555431
Q ss_pred -CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 109 -KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 109 -~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+...+|.+....+.+ .-.+.+++++..+
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 455555433322222 2235555555443
No 256
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=53.21 E-value=32 Score=25.98 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=39.9
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
..++..|.+|+....+ ..++++.+++. .++.+|.++....++ .+.++++++.+++.
T Consensus 40 ~~l~~~G~eVi~lG~~------~p~e~lv~aa~~~~~diV~lS~~~~~~-----~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 40 RALRDAGFEVVYTGLR------QTPEQVAMAAVQEDVDVIGVSILNGAH-----LHLMKRLMAKLREL 96 (161)
T ss_dssp HHHHHTTCEEECCCSB------CCHHHHHHHHHHTTCSEEEEEESSSCH-----HHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHhcCCCEEEEEeechhh-----HHHHHHHHHHHHhc
Confidence 5667889999887643 57788877765 578888776654322 45588888888776
No 257
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=52.79 E-value=93 Score=25.38 Aligned_cols=69 Identities=7% Similarity=0.044 Sum_probs=42.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
++...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 77 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALID 77 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHHH
Confidence 3445566666655544566677778888888776665666666666666666666542 24555555543
No 258
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=52.25 E-value=86 Score=25.64 Aligned_cols=98 Identities=10% Similarity=0.076 Sum_probs=54.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc---
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT--- 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~--- 107 (352)
++...+++|.+++.-=..+...|.+.|-+|++.+-.-.... ..++..|.++..+..+-. |.+++++.++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~ 81 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKLD 81 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHH
Confidence 45555666655554445666778888988888754332222 334556888888876532 4555555443
Q ss_pred -C--CeeEEEEcCC-CCCccc--CCCHHHHHHHHHH
Q 018665 108 -E--KSRLLILCSP-SNPTGS--VYPKNLLDEIARI 137 (352)
Q Consensus 108 -~--~~~~i~i~~p-~nptG~--~~~~~~l~~l~~~ 137 (352)
+ +.. ++++|. .++.+- -++.++++++.++
T Consensus 82 ~~~G~iD-iLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 82 AEGIHVD-ILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HTTCCCC-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCc-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 1 334 344444 222222 2466667766653
No 259
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=52.16 E-value=27 Score=29.09 Aligned_cols=76 Identities=11% Similarity=0.069 Sum_probs=44.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC--Cee
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSR 111 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--~~~ 111 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+. -|.+.+++.++. +..
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDL-----QDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCT-----TCHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCC-----CCHHHHHHHHHhcCCCC
Confidence 3445667776665544566677778888887765433333445555566777776653 256666665543 444
Q ss_pred EEE
Q 018665 112 LLI 114 (352)
Q Consensus 112 ~i~ 114 (352)
.+|
T Consensus 89 ~lv 91 (291)
T 3rd5_A 89 VLI 91 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 260
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=51.29 E-value=66 Score=26.24 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=55.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCC-CChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeE
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 112 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~-~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~ 112 (352)
++...+++|.+++.-=..+...|.+.|-+|++.+-.- ......++..|.++..+..+-. |.+.+++.++....-
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFD 81 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCC
Confidence 4444455555444433555667888888887764322 2344566778888888876532 344555555443333
Q ss_pred EEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 018665 113 LILCSPS-NPTG--SVYPKNLLDEIARI 137 (352)
Q Consensus 113 i~i~~p~-nptG--~~~~~~~l~~l~~~ 137 (352)
++++|.. .+.+ .-++.++++++.++
T Consensus 82 iLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 82 ILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 5555552 2222 23566777777664
No 261
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=50.68 E-value=65 Score=26.42 Aligned_cols=65 Identities=14% Similarity=0.059 Sum_probs=38.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.+
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~ 70 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVA 70 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHH
Confidence 4455555444433556667778888888766555555566666666666666542 2455555544
No 262
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=50.66 E-value=45 Score=27.44 Aligned_cols=67 Identities=15% Similarity=0.076 Sum_probs=38.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+.. |.+.+++.+
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~ 95 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVT-----SEDSVLAAI 95 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHH
Confidence 3345666655554445566677788888877654433344455556666777766532 445554444
No 263
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=50.35 E-value=24 Score=26.42 Aligned_cols=93 Identities=8% Similarity=0.041 Sum_probs=53.5
Q ss_pred HHHHHHHHhcCC--CCEEEecCCCCCChHHHHHh-cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCccc
Q 018665 48 SILQAVLAVCSP--GDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGS 124 (352)
Q Consensus 48 a~~~~~~~l~~~--~~~vl~~~~~~~~~~~~~~~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~ 124 (352)
.+....+.+.+- |=+++.+.. +...++. .|.++..+.--.+++ + .++.+.++.+-.-+++..| .|.|
T Consensus 25 ~~v~~ak~~~~ll~Gf~l~AT~g----Ta~~L~e~~Gl~v~~v~k~~eGG---~-p~I~d~I~~geIdlVInt~-~pl~- 94 (152)
T 1b93_A 25 MLMSWVERHQPLLEQHVLYATGT----TGNLISRATGMNVNAMLSGPMGG---D-QQVGALISEGKIDVLIFFW-DPLN- 94 (152)
T ss_dssp HHHHHHHHTHHHHTTSEEEEETT----HHHHHHHHHCCCCEEECCGGGTH---H-HHHHHHHHTTCCCEEEEEC-CTTS-
T ss_pred HHHHHHHHHHHHhCCCEEEEccH----HHHHHHHHhCceeEEEEecCCCC---C-chHHHHHHCCCccEEEEcC-Cccc-
Confidence 333344444332 445555443 3445555 788887775322222 3 3566667654444444444 3334
Q ss_pred CCC-HHHHHHHHHHHHhCCCEEEEeccc
Q 018665 125 VYP-KNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 125 ~~~-~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
..+ ..+...|.+.|..+ |++++.--+
T Consensus 95 ~~~h~~D~~~IrR~A~~~-~IP~~T~la 121 (152)
T 1b93_A 95 AVPHDPDVKALLRLATVW-NIPVATNVA 121 (152)
T ss_dssp CCTTHHHHHHHHHHHHHT-TCCEESSHH
T ss_pred CCcccccHHHHHHHHHHc-CCCEEeCHH
Confidence 344 66799999999999 999986544
No 264
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=50.27 E-value=45 Score=27.54 Aligned_cols=96 Identities=9% Similarity=-0.028 Sum_probs=49.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc------CC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------EK 109 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------~~ 109 (352)
...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+. -|.+.+++.++ .+
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 34455554444433555666778888888765443334445555566666666542 24555555443 14
Q ss_pred eeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 110 SRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 110 ~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
...+|.+.-..+.+. -.+.+++++..+
T Consensus 104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 104 VDKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 555544333222222 245555655544
No 265
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=49.83 E-value=19 Score=30.16 Aligned_cols=65 Identities=9% Similarity=0.014 Sum_probs=38.9
Q ss_pred HHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCC--CCChHHHHHhcCCeEEEeccc
Q 018665 22 QFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF--WVSYPEMARIADATPVILPTR 90 (352)
Q Consensus 22 ~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~--~~~~~~~~~~~g~~v~~i~~~ 90 (352)
.-++.+...|+.. +....+.++++...+.....++.+|+++.+. -......++..|++|..+++-
T Consensus 123 ~Ta~aL~~~G~~~----~~p~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y 189 (286)
T 1jr2_A 123 ATASLVSKIGLDT----EGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVY 189 (286)
T ss_dssp HHHHHHHHTTCCC----SCCSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECE
T ss_pred HHHHHHHHcCCCc----CCCCccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEE
Confidence 3444555555432 2234455666665554433456788887654 344667888889888888764
No 266
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=48.38 E-value=1.1e+02 Score=24.98 Aligned_cols=98 Identities=8% Similarity=0.079 Sum_probs=51.0
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC--
Q 018665 33 SYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-- 108 (352)
Q Consensus 33 ~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-- 108 (352)
.++..-+++|.+++.-=..+...|.+.|-+|++..-.-.. ....+...+.++..+..+-. |.+++++.+++
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTI 78 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHH
Confidence 3455556666555543355556777888777765433222 22344556777777766532 45555554431
Q ss_pred ----CeeEEEEcCCC--CCcccCCCHHHHHHHHH
Q 018665 109 ----KSRLLILCSPS--NPTGSVYPKNLLDEIAR 136 (352)
Q Consensus 109 ----~~~~i~i~~p~--nptG~~~~~~~l~~l~~ 136 (352)
+.. ++++|.. .+...-.+.+++++..+
T Consensus 79 ~~~G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~ 111 (258)
T 4gkb_A 79 ATFGRLD-GLVNNAGVNDGIGLDAGRDAFVASLE 111 (258)
T ss_dssp HHHSCCC-EEEECCCCCCCCCTTSCHHHHHHHHH
T ss_pred HHhCCCC-EEEECCCCCCCCCccCCHHHHHHHHH
Confidence 334 3444442 22333445555655554
No 267
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=48.14 E-value=34 Score=21.88 Aligned_cols=31 Identities=19% Similarity=0.110 Sum_probs=26.4
Q ss_pred CCeEEEEeec-CHHHHHHHHHHHHHHHhhhCC
Q 018665 318 DTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 348 (352)
Q Consensus 318 ~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~~ 348 (352)
...+|+|+.. +..+.+++..+|-+++.++..
T Consensus 45 akrvrisitartkkeaekfaailikvfaelgy 76 (106)
T 1qys_A 45 AKRVRISITARTKKEAEKFAAILIKVFAELGY 76 (106)
T ss_dssp CSEEEEEEECSSHHHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEEEEecchhHHHHHHHHHHHHHHHhCC
Confidence 4578999998 889999999999999888753
No 268
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=47.72 E-value=64 Score=26.13 Aligned_cols=67 Identities=15% Similarity=0.094 Sum_probs=39.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+. -|.+.+++.+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 73 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI-----ADLNEIAVLG 73 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC-----CCHHHHHHHH
Confidence 455667776665544566677778888888765443334444455566676776543 2455555444
No 269
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=47.21 E-value=94 Score=24.88 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=45.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC------
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------ 108 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+..|..+...++. |.+.+++.++.
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~-------~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVA-------DPASVERGFAEALAHLG 76 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTT-------CHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCC-------CHHHHHHHHHHHHHHcC
Confidence 34456666555444455666677778787765432222223333445444333332 45555555432
Q ss_pred CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 109 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 109 ~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+...+|.+.-..+.+ ...+.+++++..+
T Consensus 77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~ 106 (245)
T 1uls_A 77 RLDGVVHYAGITRDNFHWKMPLEDWELVLR 106 (245)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 445554333222222 2235555555544
No 270
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=46.70 E-value=1.1e+02 Score=24.56 Aligned_cols=68 Identities=9% Similarity=-0.077 Sum_probs=40.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
++...+++|.+++..=..+...|.+.|.+|++.+-.-..... .++..+.++..+..+-. |.+.+++.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 75 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFL 75 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHH
Confidence 344566777666554456667777888888776544333333 33445777877776532 455555544
No 271
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.56 E-value=51 Score=27.16 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=50.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC---------------ChHHHHHhcCCeEEEecccCCCCcccCH
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV---------------SYPEMARIADATPVILPTRISENFLLDP 99 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~---------------~~~~~~~~~g~~v~~i~~~~~~~~~~d~ 99 (352)
+...+++|.++...=..+...|.+.|.+|++.+-... .....++..+.++..+..+- -|.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV-----RDR 83 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC-----CCH
Confidence 4455666666655445666777788888876543211 01122344577777776653 245
Q ss_pred HHHHhhcc------CCeeEEEEcCCCCCcccCCCHHHHHHHHH
Q 018665 100 KVLESKLT------EKSRLLILCSPSNPTGSVYPKNLLDEIAR 136 (352)
Q Consensus 100 ~~l~~~l~------~~~~~i~i~~p~nptG~~~~~~~l~~l~~ 136 (352)
+.+++.++ .+...+|.+.-..+.+...+.+++++..+
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 55555443 14555554333333333356555665554
No 272
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=46.27 E-value=78 Score=25.52 Aligned_cols=68 Identities=10% Similarity=0.047 Sum_probs=40.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+.. |.+.+++.+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~ 74 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS-----KEADVDAAV 74 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----SHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHH
Confidence 34456666666655445566677777888877654433444455566666777766532 445555544
No 273
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=45.12 E-value=1.2e+02 Score=24.31 Aligned_cols=67 Identities=10% Similarity=0.031 Sum_probs=37.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCC-CChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~-~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.- ......++..+.++..+..+- -|.+.+++.+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 73 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-----SQPGDVEAFG 73 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHH
Confidence 345566666555544566667777787777654322 222223445566676666542 2455555544
No 274
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=44.71 E-value=22 Score=28.01 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=29.8
Q ss_pred cCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 107 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 107 ~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.-.+..+++.-..|+.|.... +.++.+++++| |+.++.
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h-~l~iit 194 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMR---LDDCIQFGKKH-GIKIIN 194 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCB---HHHHHHHHHHH-TCCEEE
T ss_pred CCCceEEEEEEeECCCCCcCC---HHHHHHHHHHc-CCcEEE
Confidence 346777776666688899999 88888888899 988774
No 275
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=44.20 E-value=58 Score=25.93 Aligned_cols=92 Identities=10% Similarity=0.111 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCC---ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCc
Q 018665 46 KQSILQAVLAVCSPGDEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 122 (352)
Q Consensus 46 ~~a~~~~~~~l~~~~~~vl~~~~~~~---~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt 122 (352)
|+++..+.++ ...|.+|++..|.-. +......+.|..+..+++. +.+++.+.+..+..+|++...+.
T Consensus 43 T~lL~~a~r~-~~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~-------~~~~~~~~~~~~~dvViIDEaQF-- 112 (214)
T 2j9r_A 43 EELIRRVRRT-QFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVS-------ASKDIFKHITEEMDVIAIDEVQF-- 112 (214)
T ss_dssp HHHHHHHHHH-HHTTCCEEEEECC-----------------CCEEECS-------SGGGGGGGCCSSCCEEEECCGGG--
T ss_pred HHHHHHHHHH-HHCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecC-------CHHHHHHHHhcCCCEEEEECccc--
Confidence 4555554444 445667777765432 1224556667766655553 12344444544577888877765
Q ss_pred ccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 123 GSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 123 G~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
++.+.++.+.+++ +. ++.+|+=.-.
T Consensus 113 ---~~~~~V~~l~~l~-~~-~~~Vi~~Gl~ 137 (214)
T 2j9r_A 113 ---FDGDIVEVVQVLA-NR-GYRVIVAGLD 137 (214)
T ss_dssp ---SCTTHHHHHHHHH-HT-TCEEEEEECS
T ss_pred ---CCHHHHHHHHHHh-hC-CCEEEEEecc
Confidence 5555564444444 56 7888865443
No 276
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=44.08 E-value=69 Score=25.14 Aligned_cols=56 Identities=9% Similarity=0.032 Sum_probs=39.7
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
..++..|.+++.+..+ +.++++.+.+. .++.+|.++....++ ...++++++.+++.
T Consensus 110 ~~l~~~G~~v~~LG~~------vp~~~l~~~~~~~~~d~v~lS~~~~~~-----~~~~~~~i~~l~~~ 166 (210)
T 1y80_A 110 MMLESGGFTVYNLGVD------IEPGKFVEAVKKYQPDIVGMSALLTTT-----MMNMKSTIDALIAA 166 (210)
T ss_dssp HHHHHTTCEEEECCSS------BCHHHHHHHHHHHCCSEEEEECCSGGG-----THHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHHcCCCEEEEecccccc-----HHHHHHHHHHHHhc
Confidence 5667899999887642 57888888775 478888876654322 34588888888775
No 277
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=43.03 E-value=48 Score=26.30 Aligned_cols=93 Identities=5% Similarity=-0.001 Sum_probs=46.5
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc---CCeeEEEE
Q 018665 39 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLIL 115 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~~~~~i~i 115 (352)
+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+. -|.+.+++.++ +....++.
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCEEEE
Confidence 55665555444556666777777777665443334444555555555555432 24566655553 23344443
Q ss_pred cCCCCCccc--CCCHHHHHHHHH
Q 018665 116 CSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 116 ~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+....+.+. ..+.+++++..+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHH
Confidence 332222222 245555555544
No 278
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=42.60 E-value=91 Score=25.47 Aligned_cols=98 Identities=6% Similarity=0.010 Sum_probs=55.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhccC--
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE-- 108 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-- 108 (352)
++...+++|.+++.-=..+...|.+.|.+|++.+-.-.... ..++..|.++..+..+- -|.+++++.++.
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv-----t~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADV-----SKKKDVEEFVRRTF 79 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 34555666655554445556677788888887654332222 33456788888887653 255665555532
Q ss_pred ----CeeEEEEcCCC--CCcc--cCCCHHHHHHHHHH
Q 018665 109 ----KSRLLILCSPS--NPTG--SVYPKNLLDEIARI 137 (352)
Q Consensus 109 ----~~~~i~i~~p~--nptG--~~~~~~~l~~l~~~ 137 (352)
+.. ++++|.. .+.+ .-++.++++++.++
T Consensus 80 ~~~G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 80 ETYSRID-VLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHHSCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCC-EEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 334 4445542 2323 23566777777654
No 279
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=42.41 E-value=1.3e+02 Score=24.21 Aligned_cols=67 Identities=13% Similarity=0.074 Sum_probs=35.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.......+..+.++..+..+. -|.+.+++.+
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 71 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVM 71 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHH
Confidence 344555555544433556666777788887765332222333344455666666542 2555555544
No 280
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=42.39 E-value=1.2e+02 Score=24.70 Aligned_cols=98 Identities=11% Similarity=0.130 Sum_probs=48.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCCCCcccCHHHHHhhcc--
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLT-- 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-- 107 (352)
+....+++|.++...=..+...|.+.|.+|++..-.-....... +..+.++..+..+. -|.+.+++.++
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLLEAV 93 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHH
Confidence 34455666655544445566677778878776543222222222 23366666666542 24555555543
Q ss_pred ----CCeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 108 ----EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 108 ----~~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
.+...+|.+......+ .-.+.+++++..+
T Consensus 94 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 1455555333222222 1235555555544
No 281
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=42.15 E-value=50 Score=28.42 Aligned_cols=57 Identities=16% Similarity=0.179 Sum_probs=35.6
Q ss_pred HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCC--HHHHHHHHHHHHhCCCEEEEeccc
Q 018665 74 PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP--KNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 74 ~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~--~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
...++..|++.+.+|+.-..- . +..+.|..-+ .+.++++++.|.++ |+.+|+|-.
T Consensus 48 i~~i~~~G~n~vRipi~w~~~-----------~-----------~~~~~~~~~~~~l~~l~~~v~~a~~~-Gi~vildlH 104 (345)
T 3ndz_A 48 INKIKEAGFNTLRLPVTWDGH-----------M-----------GAAPEYTIDQTWMKRVEEIANYAFDN-DMYVIINLH 104 (345)
T ss_dssp HHHHHHHTCCEEEECCCCTTS-----------B-----------CCTTTCCBCHHHHHHHHHHHHHHHTT-TCEEEECCC
T ss_pred HHHHHHCCCCEEEEeeehHHh-----------C-----------CCCCCCccCHHHHHHHHHHHHHHHHC-CCEEEEecC
Confidence 456788899999998752210 0 1111122111 35688888888888 898888865
Q ss_pred cc
Q 018665 152 YE 153 (352)
Q Consensus 152 ~~ 153 (352)
+.
T Consensus 105 ~~ 106 (345)
T 3ndz_A 105 HE 106 (345)
T ss_dssp SC
T ss_pred Cc
Confidence 44
No 282
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=42.06 E-value=52 Score=27.25 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=6.2
Q ss_pred HHHHhcCCeEEEec
Q 018665 75 EMARIADATPVILP 88 (352)
Q Consensus 75 ~~~~~~g~~v~~i~ 88 (352)
..+...|+.-..++
T Consensus 117 ~~~~~aGvdgvii~ 130 (267)
T 3vnd_A 117 TKAQAAGVDSVLIA 130 (267)
T ss_dssp HHHHHHTCCEEEET
T ss_pred HHHHHcCCCEEEeC
Confidence 33344455544443
No 283
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=41.13 E-value=47 Score=32.52 Aligned_cols=76 Identities=8% Similarity=0.153 Sum_probs=53.8
Q ss_pred CCCCCChHHHHHhc-CCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 67 APFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 67 ~~~~~~~~~~~~~~-g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
-|+|.+...+.... +.++..+-++.. .-++.++++++ .+.+.+++.+...| ....+++.++|+++ |+
T Consensus 550 vp~y~sv~ea~~~~p~~DlaVI~vP~~----~v~~av~ea~~~~Gvk~~Viis~Gf~------e~~~~~l~~~A~~~-g~ 618 (829)
T 3pff_A 550 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGIP------EALTRKLIKKADQK-GV 618 (829)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCCC------HHHHHHHHHHHHHH-TC
T ss_pred cccCCcHHHHhhccCCCcEEEEeCCHH----HHHHHHHHHHhhCCCCEEEEeCCCCC------HHHHHHHHHHHHHc-CC
Confidence 47888888888764 455555555432 36788999998 88888777655433 34578899999999 99
Q ss_pred EEEeccccc
Q 018665 145 LVLSDEIYE 153 (352)
Q Consensus 145 ~livD~~~~ 153 (352)
.+|-=++.+
T Consensus 619 rliGPNc~G 627 (829)
T 3pff_A 619 TIIGPATVG 627 (829)
T ss_dssp EEECSSCCC
T ss_pred EEEcCCCcc
Confidence 999544443
No 284
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=40.92 E-value=51 Score=27.48 Aligned_cols=16 Identities=6% Similarity=-0.043 Sum_probs=11.3
Q ss_pred HHHHhcCCeEEEeccc
Q 018665 75 EMARIADATPVILPTR 90 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~ 90 (352)
..++..|++.+.+++.
T Consensus 38 ~~i~~~G~N~VRi~~~ 53 (294)
T 2whl_A 38 PAIAEQGANTIRIVLS 53 (294)
T ss_dssp HHHHHTTCSEEEEEEC
T ss_pred HHHHHcCCCEEEEEec
Confidence 4556778888877764
No 285
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=40.69 E-value=79 Score=25.41 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=48.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc------C
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------E 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------~ 108 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.+...+..+- -|.+.+++.++ .
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 445566665554434556667778888887765433333334444444445555432 25555555543 1
Q ss_pred CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 109 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 109 ~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+...++.+.-..+.+ ...+.+++++..+
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 445544333222222 2235555555543
No 286
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=40.33 E-value=50 Score=30.33 Aligned_cols=58 Identities=16% Similarity=0.174 Sum_probs=34.9
Q ss_pred hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCC--HHHHHHHHHHHHhCCCEEEEecc
Q 018665 73 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP--KNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~--~~~l~~l~~~~~~~~~~~livD~ 150 (352)
....++..|++.+.+++.-..- + +..+.+.+-+ .+.++++++.|+++ |+.+|+|-
T Consensus 50 di~~i~~~G~N~vRipi~w~~~-----------~-----------~~~~~~~~~~~~l~~~d~vv~~a~~~-Gi~vildl 106 (515)
T 3icg_A 50 MINKIKEAGFNTLRLPVTWDGH-----------M-----------GAAPEYTIDQTWMKRVEEIANYAFDN-DMYVIINL 106 (515)
T ss_dssp HHHHHHHHTCCEEEECCCCTTS-----------B-----------CCTTTCCBCHHHHHHHHHHHHHHHTT-TCEEEEEC
T ss_pred HHHHHHHCCCCEEEEccchHHh-----------C-----------CCCCCCccCHHHHHHHHHHHHHHHHC-CCEEEEec
Confidence 3457788899998888752110 0 0001111111 34688888888888 88888886
Q ss_pred ccc
Q 018665 151 IYE 153 (352)
Q Consensus 151 ~~~ 153 (352)
.+.
T Consensus 107 H~~ 109 (515)
T 3icg_A 107 HHE 109 (515)
T ss_dssp CSC
T ss_pred CCC
Confidence 544
No 287
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=40.28 E-value=1.3e+02 Score=24.50 Aligned_cols=98 Identities=6% Similarity=-0.018 Sum_probs=50.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhccC--
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 108 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-- 108 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-..... .++..+.++..+..+- -|.+.+++.++.
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLD 98 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344555666555444455666777888888876543322222 2334577777776653 255555555531
Q ss_pred ----CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 109 ----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 109 ----~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+...+|.+.-....+ .-.+.+++++..+
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 445544333222222 1245555555544
No 288
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=40.24 E-value=1.6e+02 Score=24.41 Aligned_cols=98 Identities=5% Similarity=0.068 Sum_probs=50.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCC------------CC---hHHHHHhcCCeEEEecccCCCCcccC
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW------------VS---YPEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~------------~~---~~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
++...+++|.+++..=..+...|.+.|.+|++.+-.- .. ....++..+.++..+..+. -|
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~ 100 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV-----RD 100 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC-----CC
Confidence 3445566666655444556667778888887653220 00 1123345677777777653 25
Q ss_pred HHHHHhhcc------CCeeEEEEcCCCCCccc---CCCHHHHHHHHH
Q 018665 99 PKVLESKLT------EKSRLLILCSPSNPTGS---VYPKNLLDEIAR 136 (352)
Q Consensus 99 ~~~l~~~l~------~~~~~i~i~~p~nptG~---~~~~~~l~~l~~ 136 (352)
.+.+++.++ .+...+|.+.-....+. -.+.+++++..+
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 555555553 14555443333222222 235555555554
No 289
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=39.61 E-value=1.8e+02 Score=24.81 Aligned_cols=76 Identities=14% Similarity=-0.024 Sum_probs=45.9
Q ss_pred ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 72 SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 72 ~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++...++..|... +. +++..-|.-++.+...-+...+-+ -.+|.+...+.+++.++++.|+++ |+.+++|-.
T Consensus 10 s~~~~~e~~g~~~--~~---~~G~~~d~~~ilk~~G~N~VRi~~--w~~P~~g~~~~~~~~~~~~~A~~~-GlkV~ld~H 81 (332)
T 1hjs_A 10 SSVVVEERAGVSY--KN---TNGNAQPLENILAANGVNTVRQRV--WVNPADGNYNLDYNIAIAKRAKAA-GLGVYIDFH 81 (332)
T ss_dssp TTHHHHHHTTCCC--BC---TTSCBCCHHHHHHHTTCCEEEEEE--CSSCTTCTTSHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHcCCEE--EC---CCCCcccHHHHHHHCCCCEEEEee--eeCCCCCcCCHHHHHHHHHHHHHC-CCEEEEEec
Confidence 4455666667653 22 122223444443333323333322 356777778888899999999999 999999965
Q ss_pred cccc
Q 018665 152 YEHI 155 (352)
Q Consensus 152 ~~~~ 155 (352)
+++.
T Consensus 82 ysd~ 85 (332)
T 1hjs_A 82 YSDT 85 (332)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 5543
No 290
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=39.52 E-value=1.4e+02 Score=24.24 Aligned_cols=93 Identities=12% Similarity=0.006 Sum_probs=46.2
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEc
Q 018665 39 ILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 116 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l~~~--~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~ 116 (352)
|++|.++...=..++..|.+. |.+|.+..-.-... ..+...+..++..++ .|.+.+.++++ +...|+.+
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~D~-------~d~~~~~~~~~-~~d~vi~~ 72 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-QALAAQGITVRQADY-------GDEAALTSALQ-GVEKLLLI 72 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-HHHHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEEC
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-hhhhcCCCeEEEcCC-------CCHHHHHHHHh-CCCEEEEe
Confidence 455544333334556667665 65555433211122 223344665554443 26788888776 45666654
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 117 SPSNPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 117 ~p~nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
....+.. .....+.+++.|++. ++
T Consensus 73 a~~~~~~---~~~~~~~l~~a~~~~-~~ 96 (286)
T 2zcu_A 73 SSSEVGQ---RAPQHRNVINAAKAA-GV 96 (286)
T ss_dssp C-----------CHHHHHHHHHHHH-TC
T ss_pred CCCCchH---HHHHHHHHHHHHHHc-CC
Confidence 4322211 123367788888876 64
No 291
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=39.44 E-value=1.1e+02 Score=24.64 Aligned_cols=68 Identities=10% Similarity=0.084 Sum_probs=35.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 71 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV-----TIEEDWQRVVA 71 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHH
Confidence 344566665554444556667777787877654322222233344454555555442 14555555443
No 292
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=38.82 E-value=64 Score=27.20 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=13.3
Q ss_pred hHHHHHhcCCeEEEeccc
Q 018665 73 YPEMARIADATPVILPTR 90 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~ 90 (352)
....++..|++.+.+++.
T Consensus 46 d~~~l~~~G~n~vRi~i~ 63 (320)
T 3nco_A 46 YFKIIKERGFDSVRIPIR 63 (320)
T ss_dssp HHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHCCCCEEEEeee
Confidence 346777889988888863
No 293
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=38.71 E-value=73 Score=25.48 Aligned_cols=76 Identities=11% Similarity=0.077 Sum_probs=41.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC--CeeE
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRL 112 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--~~~~ 112 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+....++..+..+. -|.+.+.+.+++ +...
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHHhcCCCCE
Confidence 445566665555444556667777888888765433333344444444444444432 255666665543 4455
Q ss_pred EEE
Q 018665 113 LIL 115 (352)
Q Consensus 113 i~i 115 (352)
++.
T Consensus 88 li~ 90 (249)
T 3f9i_A 88 LVC 90 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 294
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=38.29 E-value=1.6e+02 Score=24.05 Aligned_cols=97 Identities=11% Similarity=0.124 Sum_probs=48.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCCCCcccCHHHHHhhcc---
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLT--- 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~--- 107 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-....... ...+.++..+..+- -|.+.+++.++
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-----RAPPAVMAAVDQAL 100 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3445666655554445666778888888877644322222222 22466777776653 24555555443
Q ss_pred ---CCeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 108 ---EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 108 ---~~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
.+...+|.+.-....+ ...+.+++++..+
T Consensus 101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHH
Confidence 1445544333222211 1245555555544
No 295
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=38.14 E-value=65 Score=23.38 Aligned_cols=56 Identities=7% Similarity=-0.047 Sum_probs=38.5
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
..++..|.+++.+-.+ ..++++.++.. .++.+|.++....++ .+.++++++.+++.
T Consensus 25 ~~l~~~G~~Vi~lG~~------~p~e~~v~~a~~~~~d~v~lS~~~~~~-----~~~~~~~i~~l~~~ 81 (137)
T 1ccw_A 25 HAFTNAGFNVVNIGVL------SPQELFIKAAIETKADAILVSSLYGQG-----EIDCKGLRQKCDEA 81 (137)
T ss_dssp HHHHHTTCEEEEEEEE------ECHHHHHHHHHHHTCSEEEEEECSSTH-----HHHHTTHHHHHHHT
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHhcCCCEEEEEecCcCc-----HHHHHHHHHHHHhc
Confidence 5677899999877542 57888877765 578888877665432 33466777777665
No 296
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=37.06 E-value=78 Score=25.93 Aligned_cols=82 Identities=10% Similarity=0.134 Sum_probs=38.4
Q ss_pred CEEEecCCCC---CChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCC-HHHHHHHHH
Q 018665 61 DEVIIPAPFW---VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP-KNLLDEIAR 136 (352)
Q Consensus 61 ~~vl~~~~~~---~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~-~~~l~~l~~ 136 (352)
|.+++++--+ ..+...++..|.+++.+-.+. -+.+.+++..+.....+++.+....||...+ .+.+.++.+
T Consensus 118 dG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~-----t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~ 192 (252)
T 3tha_A 118 CALIVPELSFEESDDLIKECERYNIALITLVSVT-----TPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVK 192 (252)
T ss_dssp EEEECTTCCGGGCHHHHHHHHHTTCEECEEEETT-----SCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHH
T ss_pred CEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCC-----CcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHH
Confidence 5666665322 234455666676655543331 1234444444433344444443345665432 123555555
Q ss_pred HHHhCCCEEEE
Q 018665 137 IVAKHPRLLVL 147 (352)
Q Consensus 137 ~~~~~~~~~li 147 (352)
.++++.+++++
T Consensus 193 ~vr~~~~~Pv~ 203 (252)
T 3tha_A 193 EIRSFTNLPIF 203 (252)
T ss_dssp HHHTTCCSCEE
T ss_pred HHHHhcCCcEE
Confidence 55554244444
No 297
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=37.03 E-value=1.4e+02 Score=23.72 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=49.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhccC---
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--- 108 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.... ..++..+.++..+..+. -|.+.+++.++.
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFFAEIKA 78 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 3455666665554445566677777888776654322222 33344577777776653 245555554431
Q ss_pred ---CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 109 ---KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 109 ---~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+...++.+....+.+. ..+.+++++..+
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3455554333222221 235555555443
No 298
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=36.46 E-value=1.5e+02 Score=24.33 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=46.6
Q ss_pred hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 73 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+..+++..|++|..++...- ..+.++|. +..+||+++.. ...++.+.++.|.+.+++- +.++++=..
T Consensus 22 l~~aL~~~g~~V~~i~~~~~---~~~~~~L~-----~yDvIIl~d~~---~~~l~~~~~~~L~~yV~~G-GgLi~~gG~ 88 (259)
T 3rht_A 22 LAGLMTSWQWEFDYIPSHVG---LDVGELLA-----KQDLVILSDYP---AERMTAQAIDQLVTMVKAG-CGLVMLGGW 88 (259)
T ss_dssp HHHHHHHTTCCCEEECTTSC---BCSSHHHH-----TCSEEEEESCC---GGGBCHHHHHHHHHHHHTT-CEEEEECST
T ss_pred HHHHHHhCCceEEEeccccc---ccChhHHh-----cCCEEEEcCCc---cccCCHHHHHHHHHHHHhC-CeEEEecCc
Confidence 34578889999999886421 12455554 56777776532 2356788999999999988 888887443
No 299
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=36.32 E-value=97 Score=24.64 Aligned_cols=95 Identities=9% Similarity=0.205 Sum_probs=45.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc------CCe
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------EKS 110 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------~~~ 110 (352)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++ .+.
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC-----CCHHHHHHHHHHHHHhcCCC
Confidence 3456665554444555666777788887765433333333333333455555542 14555555443 144
Q ss_pred eEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 111 RLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 111 ~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
..++.+....+.+. ..+.+++++..+
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 55553333222221 235555555554
No 300
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=36.31 E-value=1.7e+02 Score=23.53 Aligned_cols=95 Identities=9% Similarity=0.092 Sum_probs=46.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC-hHHHHHh---c-CCeEEEecccCCCCcccCHHHHHhhccC---
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMARI---A-DATPVILPTRISENFLLDPKVLESKLTE--- 108 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~-~~~~~~~---~-g~~v~~i~~~~~~~~~~d~~~l~~~l~~--- 108 (352)
..+++|.++...=..+...|.+.|.+|++..-.-.. .....+. . +.++..+..+. -|.+.+++.++.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 445555554443355666677788888776543222 2222221 1 66666666542 255555555531
Q ss_pred ---CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 109 ---KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 109 ---~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+...+|.+.-....+ ...+.+++++..+
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 455555333222222 1235555555443
No 301
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=36.28 E-value=1.6e+02 Score=23.26 Aligned_cols=79 Identities=13% Similarity=0.085 Sum_probs=40.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH---h-cCCeEEEecccCCCCcccCHHHHHhhcc--
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-ADATPVILPTRISENFLLDPKVLESKLT-- 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~---~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~-- 107 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-.......+ . .+.++..+..+. -|.+.+++.++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEI 79 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHH
Confidence 344556666555443455666677778777765432211221111 1 355666665542 25566665553
Q ss_pred ----CCeeEEEEcC
Q 018665 108 ----EKSRLLILCS 117 (352)
Q Consensus 108 ----~~~~~i~i~~ 117 (352)
.+...++.+.
T Consensus 80 ~~~~~~~d~vi~~A 93 (248)
T 2pnf_A 80 YNLVDGIDILVNNA 93 (248)
T ss_dssp HHHSSCCSEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 2455555443
No 302
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=35.88 E-value=1.1e+02 Score=24.98 Aligned_cols=94 Identities=16% Similarity=0.223 Sum_probs=47.5
Q ss_pred cEEEeCChHHHH-HHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc------CCe
Q 018665 38 QILVSNGAKQSI-LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT------EKS 110 (352)
Q Consensus 38 ~i~~~~g~~~a~-~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------~~~ 110 (352)
.+++..|++.++ ..+...|.+.|.+|++.+-.-.......+..+.++..+..+- -|.+.+++.++ .+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDV-----TDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 444444544555 455566777888887765433334445555555566665542 24555555543 145
Q ss_pred eEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 018665 111 RLLILCSPS-NPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 111 ~~i~i~~p~-nptG--~~~~~~~l~~l~~ 136 (352)
..+|.+.-. .+.+ .-.+.+++++..+
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 554433322 2212 1245555555544
No 303
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=35.87 E-value=79 Score=27.48 Aligned_cols=24 Identities=13% Similarity=0.055 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.+.++++++.|.++ |+.+|+|-.+
T Consensus 102 l~~~~~vv~~a~~~-Gi~vildlH~ 125 (376)
T 3ayr_A 102 LKRVHEVVDYPYKN-GAFVILNLHH 125 (376)
T ss_dssp HHHHHHHHHHHHTT-TCEEEEECCS
T ss_pred HHHHHHHHHHHHHC-CCEEEEECCC
Confidence 34577777788888 8888877543
No 304
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=35.73 E-value=1.5e+02 Score=24.02 Aligned_cols=69 Identities=12% Similarity=0.141 Sum_probs=37.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCC-------CC-----C---hHHHHHhcCCeEEEecccCCCCcccC
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-------WV-----S---YPEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~-------~~-----~---~~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
+....+++|.++...=..+...|.+.|.+|++.+-. +. . ....++..+.++..+..+. -|
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~ 85 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADV-----RD 85 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCT-----TC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCC-----CC
Confidence 344556666665544455666777888887765422 10 0 1122334567777776653 25
Q ss_pred HHHHHhhcc
Q 018665 99 PKVLESKLT 107 (352)
Q Consensus 99 ~~~l~~~l~ 107 (352)
.+.+++.++
T Consensus 86 ~~~v~~~~~ 94 (278)
T 3sx2_A 86 RESLSAALQ 94 (278)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 566555553
No 305
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=35.54 E-value=1.5e+02 Score=22.87 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=46.7
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccC-HHHHHhhccCCeeEEEEcC
Q 018665 39 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD-PKVLESKLTEKSRLLILCS 117 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d-~~~l~~~l~~~~~~i~i~~ 117 (352)
|++|.++...=..+...|.+.|.+|.+..-.-..... ..+.+++..++ .| .+.+.++++ +...|+.+.
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~D~-------~d~~~~~~~~~~-~~d~vi~~a 71 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVKAVHFDV-------DWTPEEMAKQLH-GMDAIINVS 71 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEEEEECCT-------TSCHHHHHTTTT-TCSEEEECC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCceEEEecc-------cCCHHHHHHHHc-CCCEEEECC
Confidence 5666544443355666777777776654321111100 03334333332 25 788888886 566666544
Q ss_pred CC-CCcccCCCHHHHHHHHHHHHhC
Q 018665 118 PS-NPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 118 p~-nptG~~~~~~~l~~l~~~~~~~ 141 (352)
.. .+.-......-...+++.|++.
T Consensus 72 g~~~~~~~~~n~~~~~~l~~a~~~~ 96 (219)
T 3dqp_A 72 GSGGKSLLKVDLYGAVKLMQAAEKA 96 (219)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHT
T ss_pred cCCCCCcEeEeHHHHHHHHHHHHHh
Confidence 32 2221222333356677777666
No 306
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=35.49 E-value=1.7e+02 Score=23.33 Aligned_cols=97 Identities=12% Similarity=0.044 Sum_probs=48.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhcc----
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT---- 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---- 107 (352)
....+++|.++...=..+...|.+.|.+|++..-.-..... .++..+.++..+..+- -|.+.+++.++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV-----ADRQGVDAAVASTVE 80 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34566777665554455666777778777765432111222 2223466666666542 24555555543
Q ss_pred --CCeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 108 --EKSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 108 --~~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
.+...+|.+.-..+.+. -.+.+++++..+
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 14555554332222222 235455555443
No 307
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=35.34 E-value=1.5e+02 Score=23.55 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=40.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeE-EEecccCCCCcccCHHHHHhhcc-----
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP-VILPTRISENFLLDPKVLESKLT----- 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v-~~i~~~~~~~~~~d~~~l~~~l~----- 107 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++ ..+..+. -|.+.+++.++
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAAAEAEAV 83 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHHHHHHhh
Confidence 344566777655444456666777778777765432222223333334444 4444432 25566665553
Q ss_pred CCeeEEEEcC
Q 018665 108 EKSRLLILCS 117 (352)
Q Consensus 108 ~~~~~i~i~~ 117 (352)
.+...+|.+.
T Consensus 84 ~~id~li~~A 93 (254)
T 2wsb_A 84 APVSILVNSA 93 (254)
T ss_dssp SCCCEEEECC
T ss_pred CCCcEEEECC
Confidence 2455555433
No 308
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=35.25 E-value=1.6e+02 Score=23.80 Aligned_cols=68 Identities=19% Similarity=0.145 Sum_probs=34.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+. -|.+.+++.++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 73 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVD 73 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecC-----CCHHHHHHHHH
Confidence 445566665555444556667777787877653222222222333332344454432 25566555553
No 309
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=35.22 E-value=1.6e+02 Score=23.69 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=20.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 67 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~ 67 (352)
+...+++|.++...=..+...|.+.|.+|++.+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIAD 43 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 445566665554444556667777787877654
No 310
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=35.16 E-value=1.5e+02 Score=24.88 Aligned_cols=97 Identities=10% Similarity=0.019 Sum_probs=48.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCC----------CCCh---HHHHHhcCCeEEEecccCCCCcccCHHH
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF----------WVSY---PEMARIADATPVILPTRISENFLLDPKV 101 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~----------~~~~---~~~~~~~g~~v~~i~~~~~~~~~~d~~~ 101 (352)
+...+++|.++...=..+...|.+.|.+|++.+-. -... ...++..+.++..+..+. -|.+.
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~ 100 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV-----ADWDQ 100 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT-----TSHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHH
Confidence 33445555554443355566677888888776432 1112 233445677777776653 25556
Q ss_pred HHhhccC------CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 102 LESKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 102 l~~~l~~------~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+++.++. +...+|.+.-....+ ...+.+++++..+
T Consensus 101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5555531 444444332222222 2245555555544
No 311
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=35.14 E-value=1.2e+02 Score=24.77 Aligned_cols=98 Identities=7% Similarity=0.079 Sum_probs=49.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCC--------C----C-C---hHHHHHhcCCeEEEecccCCCCccc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF--------W----V-S---YPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~--------~----~-~---~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
++...+++|.+++..=..+...|.+.|.+|++.+-. + . . ....++..+.++..+..+. -
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~ 83 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT-----R 83 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----T
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-----C
Confidence 344556666665554456666777888887765321 0 0 1 1122334566777776552 2
Q ss_pred CHHHHHhhccC------CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 98 DPKVLESKLTE------KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 98 d~~~l~~~l~~------~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
|.+.+++.++. +...+|.+.-....+. -.+.+++++..+
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55666655532 4454443332222221 245555555544
No 312
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=34.97 E-value=1.2e+02 Score=24.96 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=22.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 67 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~ 67 (352)
++...+++|.+++..=..+...|.+.|.+|++.+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 3455666666665544566677888888887653
No 313
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=34.92 E-value=1.8e+02 Score=23.41 Aligned_cols=69 Identities=10% Similarity=0.121 Sum_probs=36.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH---hc-CCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IA-DATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~---~~-g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-.......+ .. +.++..+..+. -|.+.+++.++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 77 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVE 77 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHH
Confidence 344566777665554455666777778777765432111222222 11 65666666542 24555555553
No 314
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=34.90 E-value=1.1e+02 Score=27.55 Aligned_cols=95 Identities=15% Similarity=0.192 Sum_probs=55.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH-hcCCeEEEecccCCCCcccCHHHHHhhccCCeeE
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTEKSRL 112 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~-~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~ 112 (352)
++...|++..+|..+...+ ..|.+.|-+|.+.+|....-...+. ..++.+..-+ .+.+.|. +..+
T Consensus 10 l~~~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~--------~~~~~l~-----~~~l 75 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGP--------FDETLLD-----SCWL 75 (457)
T ss_dssp CBTCEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESS--------CCGGGGT-----TCSE
T ss_pred CCCCEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECC--------CCccccC-----CccE
Confidence 4567888999998888755 5555667778887776544333332 2334433221 1222222 3344
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEE-Eeccc
Q 018665 113 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV-LSDEI 151 (352)
Q Consensus 113 i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~l-ivD~~ 151 (352)
|+ ..+.++ +--..+.+.|++. ++++ ++|+.
T Consensus 76 Vi-~at~~~-------~~n~~i~~~a~~~-~i~vn~~d~~ 106 (457)
T 1pjq_A 76 AI-AATDDD-------TVNQRVSDAAESR-RIFCNVVDAP 106 (457)
T ss_dssp EE-ECCSCH-------HHHHHHHHHHHHT-TCEEEETTCT
T ss_pred EE-EcCCCH-------HHHHHHHHHHHHc-CCEEEECCCc
Confidence 44 444443 2256788899999 9986 56765
No 315
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=34.87 E-value=1.3e+02 Score=25.36 Aligned_cols=69 Identities=17% Similarity=0.152 Sum_probs=40.7
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhcc---C--C--eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLT---E--K--SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~--~--~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.++..|+.-..+-.+. +..+.+.+.+..+ + + .-+++.+.|. .||..++.+ -+.++++++||+.=|=
T Consensus 97 ~A~~~Gadavlv~~P~---~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~-~tg~~l~~~---~~~~La~~~pnIvgiK 169 (313)
T 3dz1_A 97 LSMDAGAAGVMIAPPP---SLRTDEQITTYFRQATEAIGDDVPWVLQDYPL-TLSVVMTPK---VIRQIVMDSASCVMLK 169 (313)
T ss_dssp HHHHHTCSEEEECCCT---TCCSHHHHHHHHHHHHHHHCTTSCEEEEECHH-HHCCCCCHH---HHHHHHHHCSSEEEEE
T ss_pred HHHHcCCCEEEECCCC---CCCCHHHHHHHHHHHHHhCCCCCcEEEEeCcc-ccCcCCCHH---HHHHHHHhCCCEEEEE
Confidence 3445687776664442 2246566555442 1 2 4556656664 389999954 4555555667888777
Q ss_pred ccc
Q 018665 149 DEI 151 (352)
Q Consensus 149 D~~ 151 (352)
|++
T Consensus 170 d~~ 172 (313)
T 3dz1_A 170 HED 172 (313)
T ss_dssp ECC
T ss_pred cCC
Confidence 754
No 316
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=34.78 E-value=24 Score=25.94 Aligned_cols=21 Identities=14% Similarity=0.246 Sum_probs=17.4
Q ss_pred HHHHHHHHhCCCEEEEeccccc
Q 018665 132 DEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 132 ~~l~~~~~~~~~~~livD~~~~ 153 (352)
+++.++|+++ |+.++-+.+.+
T Consensus 107 ~~~~~~a~~~-Gir~vgpnc~g 127 (140)
T 1iuk_A 107 PEFEKALKEA-GIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHHHT-TCCEEESCCHH
T ss_pred HHHHHHHHHc-CCEEEcCCccc
Confidence 6788888899 99999887754
No 317
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=34.74 E-value=1.7e+02 Score=24.31 Aligned_cols=97 Identities=7% Similarity=-0.040 Sum_probs=49.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhcc----
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT---- 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---- 107 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-..... .++..+.++..+..+. -|.+.+++.++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-----RHLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34556666655544455666777788887776443322222 2334566777776653 24555555543
Q ss_pred --CCeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 108 --EKSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 108 --~~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
.+...+|.+.-....+. ..+.+++++..+
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 14555554333222222 245555555443
No 318
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=34.23 E-value=1.5e+02 Score=23.79 Aligned_cols=98 Identities=13% Similarity=0.075 Sum_probs=50.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc---
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT--- 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~--- 107 (352)
++...+++|.++...=..+...|.+.|.+|++.+-.-.... ..++..+.++..+..+- -|.+.+++.++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAAL 84 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34455666655554445566677777888877653322222 23344577777776653 24555555443
Q ss_pred ---CCeeEEEEcCCCC-CcccCCCHHHHHHHHH
Q 018665 108 ---EKSRLLILCSPSN-PTGSVYPKNLLDEIAR 136 (352)
Q Consensus 108 ---~~~~~i~i~~p~n-ptG~~~~~~~l~~l~~ 136 (352)
.+...++.+.-.. +.....+.+++++..+
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 1455544333222 2222345555555443
No 319
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=34.15 E-value=1.8e+02 Score=23.35 Aligned_cols=97 Identities=11% Similarity=0.034 Sum_probs=49.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhccC---
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--- 108 (352)
....+++|.++...=..+...|.+.|.+|++..-.-.... ..+...+.++..+..+.. |.+.+.+.++.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATGVLA 102 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHH
Confidence 3445555555544335556667777888877654332222 233345777777766532 45555554432
Q ss_pred ---CeeEEEEcCCC-CCccc--CCCHHHHHHHHH
Q 018665 109 ---KSRLLILCSPS-NPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 109 ---~~~~i~i~~p~-nptG~--~~~~~~l~~l~~ 136 (352)
+...+|.+... .+.+. ..+.+++++..+
T Consensus 103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 45555543332 22222 245455555443
No 320
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=33.82 E-value=46 Score=28.77 Aligned_cols=22 Identities=5% Similarity=0.323 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~ 150 (352)
.+.+++++++|.++ |+++|+|-
T Consensus 86 l~~ld~~v~~a~~~-GiyVIlDl 107 (345)
T 3jug_A 86 IDTVREVIELAEQN-KMVAVVEV 107 (345)
T ss_dssp HHHHHHHHHHHHTT-TCEEEEEE
T ss_pred HHHHHHHHHHHHHC-CCEEEEEe
Confidence 44455666666666 66666554
No 321
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=33.61 E-value=1.1e+02 Score=24.87 Aligned_cols=98 Identities=9% Similarity=0.063 Sum_probs=49.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC----ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC-
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV----SYPEMARIADATPVILPTRISENFLLDPKVLESKLTE- 108 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~----~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~- 108 (352)
+....+++|.+++..=..+...|.+.|.+|++..-... .....++..+.++..+..+. -|.+.+++.++.
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-----SQESEVEALFAAV 100 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 34445566655544445566677788888776433111 12233445577777776653 245555554431
Q ss_pred -----CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 109 -----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 109 -----~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+...+|.+.-..+.+ ...+.+++++..+
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 445544333222222 2245555655544
No 322
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=33.54 E-value=1.5e+02 Score=24.84 Aligned_cols=63 Identities=14% Similarity=0.098 Sum_probs=0.0
Q ss_pred EEEecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh---CCCEEEEe
Q 018665 84 PVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK---HPRLLVLS 148 (352)
Q Consensus 84 v~~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~---~~~~~liv 148 (352)
+..+..+.+.+..+|.+.+++.++ .+...++++.-+... ..++.+|.+++.+.+.+ . ++++|+
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~-~~Ls~~Er~~v~~~~~~~~~g-rvpvia 90 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGES-PTTTAAEKLELLKAVREEVGD-RAKLIA 90 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTT-TTSCHHHHHHHHHHHHHHHTT-TSEEEE
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-hhCCHHHHHHHHHHHHHHhCC-CCcEEe
No 323
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=33.29 E-value=2.2e+02 Score=24.08 Aligned_cols=106 Identities=13% Similarity=0.157 Sum_probs=51.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC--CCCEEEecCCCCCC----------hHHHHHhcCCeEEEecccCCCCcccCHHHH
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVS----------YPEMARIADATPVILPTRISENFLLDPKVL 102 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~--~~~~vl~~~~~~~~----------~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l 102 (352)
....|++|.++...=..++..|.+ .|.+|.+.+-.-.. ........+..+..+..+. -|.+.+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~~ 83 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADI-----NNPLDL 83 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCT-----TCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCC-----CCHHHH
Confidence 445677775554444556666766 77777765321110 0011112223333343321 266777
Q ss_pred HhhccCCeeEEEEcCCCCCcccCCCHH--------HHHHHHHHHHhCCCEEEE
Q 018665 103 ESKLTEKSRLLILCSPSNPTGSVYPKN--------LLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 103 ~~~l~~~~~~i~i~~p~nptG~~~~~~--------~l~~l~~~~~~~~~~~li 147 (352)
+++...++..||.+...... ...+.+ -...+++.|++. ++.+|
T Consensus 84 ~~~~~~~~D~vih~A~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~V 134 (362)
T 3sxp_A 84 RRLEKLHFDYLFHQAAVSDT-TMLNQELVMKTNYQAFLNLLEIARSK-KAKVI 134 (362)
T ss_dssp HHHTTSCCSEEEECCCCCGG-GCCCHHHHHHHHTHHHHHHHHHHHHT-TCEEE
T ss_pred HHhhccCCCEEEECCccCCc-cccCHHHHHHHHHHHHHHHHHHHHHc-CCcEE
Confidence 77633466666654432111 111111 234688888888 76544
No 324
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=33.26 E-value=99 Score=26.48 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=47.6
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.|..+...+....++++.+..+... -.+...++++.+ +-|++.-|-. .+.++.++|.++|+++ |+.+.+
T Consensus 55 ~~~~~~~ll~~~~vD~V~i~tp~~~----H~~~~~~al~aG-khV~~EKPla-----~~~~e~~~l~~~a~~~-g~~~~v 123 (352)
T 3kux_A 55 VVSDPQMLFNDPSIDLIVIPTPNDT----HFPLAQSALAAG-KHVVVDKPFT-----VTLSQANALKEHADDA-GLLLSV 123 (352)
T ss_dssp EESCHHHHHHCSSCCEEEECSCTTT----HHHHHHHHHHTT-CEEEECSSCC-----SCHHHHHHHHHHHHHT-TCCEEE
T ss_pred eECCHHHHhcCCCCCEEEEeCChHH----HHHHHHHHHHCC-CcEEEECCCc-----CCHHHHHHHHHHHHHc-CCeEEE
Confidence 4567777777777888888776322 345555555544 4456555532 3577899999999999 998876
Q ss_pred cc
Q 018665 149 DE 150 (352)
Q Consensus 149 D~ 150 (352)
--
T Consensus 124 ~~ 125 (352)
T 3kux_A 124 FH 125 (352)
T ss_dssp CC
T ss_pred Ee
Confidence 43
No 325
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=33.15 E-value=60 Score=27.66 Aligned_cols=23 Identities=22% Similarity=0.192 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEeccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
.+.+++++++|+++ |+++|+|--
T Consensus 104 ~~~ld~~v~~a~~~-Gi~VilD~H 126 (327)
T 3pzt_A 104 KNKVKEAVEAAKEL-GIYVIIDWH 126 (327)
T ss_dssp HHHHHHHHHHHHHH-TCEEEEEEE
T ss_pred HHHHHHHHHHHHHC-CCEEEEEec
Confidence 35688888888888 888888853
No 326
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=33.02 E-value=59 Score=27.26 Aligned_cols=22 Identities=14% Similarity=0.102 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhCCCEEEEeccc
Q 018665 129 NLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 129 ~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+.+++++++|.++ |+.+|+|-.
T Consensus 80 ~~ld~~v~~a~~~-Gi~Vild~H 101 (303)
T 7a3h_A 80 EKVKEAVEAAIDL-DIYVIIDWH 101 (303)
T ss_dssp HHHHHHHHHHHHH-TCEEEEEEE
T ss_pred HHHHHHHHHHHHC-CCEEEEEec
Confidence 3456666666666 666666543
No 327
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=32.97 E-value=69 Score=27.55 Aligned_cols=56 Identities=14% Similarity=0.055 Sum_probs=37.1
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCC--CHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
..++..|++.+.+|+. .+.+.. ..+.|..- -.+.++++++.|.++ |+.+|+|-.+
T Consensus 50 ~~i~~~G~N~vRipi~--------w~~~~~--------------~~~~g~~~~~~l~~ld~vV~~a~~~-Gi~vIlDlH~ 106 (340)
T 3qr3_A 50 HFVNEDGMTIFRLPVG--------WQYLVN--------------NNLGGNLDSTSISKYDQLVQGCLSL-GAYCIVDIHN 106 (340)
T ss_dssp HHHHHHCCCEEEEEEC--------HHHHTT--------------TCTTCCCCHHHHHHHHHHHHHHHHT-TCEEEEEECS
T ss_pred HHHHHCCCCEEEEEee--------HHHhCC--------------CCCCCccCHHHHHHHHHHHHHHHHC-CCEEEEEecC
Confidence 5678889999999863 222211 11112111 145699999999999 9999999754
Q ss_pred c
Q 018665 153 E 153 (352)
Q Consensus 153 ~ 153 (352)
.
T Consensus 107 ~ 107 (340)
T 3qr3_A 107 Y 107 (340)
T ss_dssp T
T ss_pred C
Confidence 3
No 328
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=32.90 E-value=2.2e+02 Score=23.90 Aligned_cols=101 Identities=10% Similarity=-0.038 Sum_probs=52.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHh-------cCCeEEEecccCCCCcccCHHHHHh
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARI-------ADATPVILPTRISENFLLDPKVLES 104 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~-------~g~~v~~i~~~~~~~~~~d~~~l~~ 104 (352)
....|++|.++...=..++..|.+.|.+|.+..-.-..... .+.. .+++++..++ .|.+.+.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-------RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-------TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-------CCHHHHHH
Confidence 56678777655444455666677777776655322222222 2222 3444444333 26788888
Q ss_pred hccCCeeEEEEcCCC-CCcccCCCH--------HHHHHHHHHHHhCCCE
Q 018665 105 KLTEKSRLLILCSPS-NPTGSVYPK--------NLLDEIARIVAKHPRL 144 (352)
Q Consensus 105 ~l~~~~~~i~i~~p~-nptG~~~~~--------~~l~~l~~~~~~~~~~ 144 (352)
+++ ++..|+.+... ++.....+. .-...+++.|++. ++
T Consensus 97 ~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~ 143 (351)
T 3ruf_A 97 VMK-GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QV 143 (351)
T ss_dssp HTT-TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC
T ss_pred Hhc-CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 886 66666654432 211111111 1134578888887 64
No 329
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=32.77 E-value=1.2e+02 Score=25.42 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=0.0
Q ss_pred CChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHh---CCC
Q 018665 71 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK---HPR 143 (352)
Q Consensus 71 ~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~---~~~ 143 (352)
+.+...+..+.--+..+..+.+.+..+|.+.+++.++ .+...++++.-+... ..++.+|.+++.+.+.+ . +
T Consensus 3 ~~~~~~~~~~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~~Ls~eEr~~v~~~~~~~~~g-r 80 (303)
T 2wkj_A 3 HHHHHHATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEA-FVQSLSEREQVLEIVAEEAKG-K 80 (303)
T ss_dssp ---CGGGGGGCSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTG-GGSCHHHHHHHHHHHHHHHTT-T
T ss_pred ccccccCCCCCceEEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccCh-hhCCHHHHHHHHHHHHHHhCC-C
Q ss_pred EEEEe
Q 018665 144 LLVLS 148 (352)
Q Consensus 144 ~~liv 148 (352)
+++|+
T Consensus 81 vpVia 85 (303)
T 2wkj_A 81 IKLIA 85 (303)
T ss_dssp SEEEE
T ss_pred CcEEE
No 330
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=32.72 E-value=2.3e+02 Score=24.08 Aligned_cols=76 Identities=12% Similarity=-0.045 Sum_probs=47.3
Q ss_pred ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 72 SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 72 ~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++....+..|... ..- ++..-+.-++.+.+.-+...+-+ -.+|.+-..+.+...++++.|+++ |+.+++|-.
T Consensus 10 s~~~~~e~~g~~~--~~~---~G~~~~~~~ilk~~G~n~vRlri--~v~P~~g~~d~~~~~~~~~~ak~~-Gl~v~ld~h 81 (334)
T 1fob_A 10 SSLLLLEDEGYSY--KNL---NGQTQALETILADAGINSIRQRV--WVNPSDGSYDLDYNLELAKRVKAA-GMSLYLDLH 81 (334)
T ss_dssp TTHHHHHHTTCCC--BCT---TSCBCCHHHHHHHHTCCEEEEEE--CSCCTTCTTCHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHcCCEE--ECC---CCCCchHHHHHHHcCCCEEEEEE--EECCCCCccCHHHHHHHHHHHHHC-CCEEEEEec
Confidence 4555677777764 221 22223444444444333333322 255667778888899999999999 999999976
Q ss_pred cccc
Q 018665 152 YEHI 155 (352)
Q Consensus 152 ~~~~ 155 (352)
|++.
T Consensus 82 ysd~ 85 (334)
T 1fob_A 82 LSDT 85 (334)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 6543
No 331
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.55 E-value=1.9e+02 Score=24.26 Aligned_cols=37 Identities=19% Similarity=0.363 Sum_probs=20.0
Q ss_pred eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 110 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 110 ~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
.-+++.+.|. .||..++.+.+.+| + ++||+.=|=|.+
T Consensus 131 lPiilYn~P~-~tg~~l~~~~~~~L---a-~~pnIvgiKdss 167 (300)
T 3eb2_A 131 IPVVIYTNPQ-FQRSDLTLDVIARL---A-EHPRIRYIKDAS 167 (300)
T ss_dssp SCEEEEECTT-TCSSCCCHHHHHHH---H-TSTTEEEEEECS
T ss_pred CCEEEEECcc-ccCCCCCHHHHHHH---H-cCCCEEEEEcCC
Confidence 3344445554 36777775444444 3 345766666653
No 332
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=32.55 E-value=1.8e+02 Score=23.50 Aligned_cols=68 Identities=10% Similarity=0.078 Sum_probs=38.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-.... ..++..+.++..+..+-. |.+.+++.+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 79 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLV 79 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHH
Confidence 34556677766655445566677788888877654322222 233345677777766532 455555544
No 333
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=32.47 E-value=60 Score=23.76 Aligned_cols=44 Identities=7% Similarity=0.163 Sum_probs=27.6
Q ss_pred HHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 99 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 99 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
.+.++++++.+++.+++. + |.. -+++.++|+++ |+.++-+.+.+
T Consensus 91 ~~vv~~~~~~gi~~i~~~-~----g~~-----~~~l~~~a~~~-Gi~vvGpnc~g 134 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQ-Y----NTY-----NREASKKADEA-GLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHHTCSEEEEC-T----TCC-----CHHHHHHHHHT-TCEEEESCCHH
T ss_pred HHHHHHHHHcCCCEEEEC-C----Cch-----HHHHHHHHHHc-CCEEEcCCchh
Confidence 344444555566666543 2 221 36788888899 99988777654
No 334
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=32.44 E-value=1.2e+02 Score=25.03 Aligned_cols=63 Identities=13% Similarity=0.161 Sum_probs=35.8
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..++..|.++...... .+..-..+.++..+..++..|++....... +.+..+.+.+. ++++|.
T Consensus 26 ~~a~~~g~~~~~~~~~--~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~--------~~~~~~~~~~~-~iPvV~ 88 (313)
T 3m9w_A 26 KKAESLGAKVFVQSAN--GNEETQMSQIENMINRGVDVLVIIPYNGQV--------LSNVVKEAKQE-GIKVLA 88 (313)
T ss_dssp HHHHHTSCEEEEEECT--TCHHHHHHHHHHHHHTTCSEEEEECSSTTS--------CHHHHHHHHTT-TCEEEE
T ss_pred HHHHHcCCEEEEECCC--CCHHHHHHHHHHHHHcCCCEEEEeCCChhh--------hHHHHHHHHHC-CCeEEE
Confidence 4566789998887653 211111234455556678888775543211 33455556677 877663
No 335
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=32.36 E-value=63 Score=27.99 Aligned_cols=58 Identities=7% Similarity=-0.030 Sum_probs=37.8
Q ss_pred hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 73 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
....++..|++.+.+|+.-. .+. ... ..-++. -.+.++++++.|.++ |+.+|+|-.+
T Consensus 57 di~~ik~~G~N~vRipi~w~--------~~~---~~~-------g~~d~~----~l~~ld~vVd~a~~~-Gi~vIldlH~ 113 (353)
T 3l55_A 57 MMTFLMQNGFNAVRIPVTWY--------EHM---DAE-------GNVDEA----WMMRVKAIVEYAMNA-GLYAIVNVHH 113 (353)
T ss_dssp HHHHHHHTTEEEEEECCCCG--------GGB---CTT-------CCBCHH----HHHHHHHHHHHHHHH-TCEEEEECCT
T ss_pred HHHHHHHcCCCEEEEcccHH--------Hhc---CCC-------CCcCHH----HHHHHHHHHHHHHHC-CCEEEEECCC
Confidence 35677899999999997521 110 000 001111 135689999999999 9999999765
Q ss_pred c
Q 018665 153 E 153 (352)
Q Consensus 153 ~ 153 (352)
.
T Consensus 114 ~ 114 (353)
T 3l55_A 114 D 114 (353)
T ss_dssp T
T ss_pred C
Confidence 4
No 336
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=32.34 E-value=1.1e+02 Score=26.11 Aligned_cols=71 Identities=10% Similarity=0.027 Sum_probs=44.2
Q ss_pred cCCCCEEEecCCCCCC-------h---HHHHHhcCCeEEEecccCCCC--cc----cCHHHHHhhcc-CCeeEEEEcCCC
Q 018665 57 CSPGDEVIIPAPFWVS-------Y---PEMARIADATPVILPTRISEN--FL----LDPKVLESKLT-EKSRLLILCSPS 119 (352)
Q Consensus 57 ~~~~~~vl~~~~~~~~-------~---~~~~~~~g~~v~~i~~~~~~~--~~----~d~~~l~~~l~-~~~~~i~i~~p~ 119 (352)
+++||+|-+..|.... + ...++.+|.+|+.-+.-.... +. .-.++|.+++. +++++|++.--.
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 5788999888887531 1 234667899998876443221 11 12455666664 577888876666
Q ss_pred CCcccCCC
Q 018665 120 NPTGSVYP 127 (352)
Q Consensus 120 nptG~~~~ 127 (352)
+-+-.++|
T Consensus 89 ~g~~rlL~ 96 (327)
T 4h1h_A 89 FNSNQLLP 96 (327)
T ss_dssp SCGGGGGG
T ss_pred hhHHHHhh
Confidence 65556665
No 337
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=32.10 E-value=1.9e+02 Score=23.50 Aligned_cols=95 Identities=11% Similarity=0.062 Sum_probs=47.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc------
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT------ 107 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------ 107 (352)
..+++|.++...=..+...|.+.|.+|++..-.-.... ..++..+.++..+..+- -|.+.+++.++
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV-----TDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 34555554444335555667778888777643322222 23344577777776543 24555555443
Q ss_pred CCeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 108 EKSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 108 ~~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
.+...+|.+.-..+.+. -.+.+++++..+
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 14455443332222221 235555555544
No 338
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=31.91 E-value=53 Score=26.75 Aligned_cols=50 Identities=14% Similarity=0.208 Sum_probs=31.4
Q ss_pred HHHHHhhccCCeeEEEEcCCCCC----cccCCCHH----HHHHHHHHHHhCCCEEEEecc
Q 018665 99 PKVLESKLTEKSRLLILCSPSNP----TGSVYPKN----LLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 99 ~~~l~~~l~~~~~~i~i~~p~np----tG~~~~~~----~l~~l~~~~~~~~~~~livD~ 150 (352)
.+.++++++.....|.+=..+.+ .|. ++.+ ..+++.++|+++ ++.+|+++
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~-l~~~~~~~~a~~l~~l~~~~-~~~liInd 103 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGP-LQARDELAACEILADAAHRY-GALFAVND 103 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCS-CCHHHHHHHHHHHHHHHHHT-TCEEEEES
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccC-CCHHHHHHHHHHHHHHHHhh-CCEEEEeC
Confidence 45566666667776666555422 111 2222 247789999999 99888865
No 339
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=31.84 E-value=1.5e+02 Score=24.03 Aligned_cols=68 Identities=18% Similarity=0.168 Sum_probs=36.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 72 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVFA 72 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHH
Confidence 345566665555444556667777787777654322223333444444555555442 24555555543
No 340
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=31.52 E-value=1.6e+02 Score=23.85 Aligned_cols=93 Identities=14% Similarity=0.100 Sum_probs=49.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC------Cee
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSR 111 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~------~~~ 111 (352)
.+++|.+++.-=..+...|.+.|.+|++.+-.-... ..+...+.++..+..+- -|.+++++.++. +..
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-~~~~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS-ADFAKERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHTTCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 466666665544666677888888888765432222 22334455666666542 245555554431 344
Q ss_pred EEEEcCC-CCCccc--CCCHHHHHHHHHH
Q 018665 112 LLILCSP-SNPTGS--VYPKNLLDEIARI 137 (352)
Q Consensus 112 ~i~i~~p-~nptG~--~~~~~~l~~l~~~ 137 (352)
. +++|. .++.+. -++.++++++.++
T Consensus 78 i-LVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 V-LVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp E-EEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred E-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4 44444 233332 2466667766653
No 341
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=31.46 E-value=1.8e+02 Score=23.89 Aligned_cols=57 Identities=5% Similarity=0.039 Sum_probs=37.3
Q ss_pred HHhc-CCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 77 ARIA-DATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 77 ~~~~-g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
++.. |.+++.+-.+ +.++++.++.. .++.+|.++....+.- .....++++++.+++.
T Consensus 152 L~~~~G~eVi~LG~~------vp~e~iv~aa~e~~~d~VglS~l~t~~~--~~~~~~~~~i~~L~~~ 210 (262)
T 1xrs_B 152 LERYEMIDAYNLGSQ------VANEDFIKKAVELEADVLLVSQTVTQKN--VHIQNMTHLIELLEAE 210 (262)
T ss_dssp GGGCTTEEEEECCSS------BCHHHHHHHHHHTTCSEEEEECCCCTTS--HHHHHHHHHHHHHHHT
T ss_pred HHhcCCcEEEECCCC------CCHHHHHHHHHHcCCCEEEEEeecCCcc--chHHHHHHHHHHHHhc
Confidence 5566 8888776432 67888877664 5888888766654310 0245578888888776
No 342
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=31.43 E-value=1.8e+02 Score=25.33 Aligned_cols=72 Identities=8% Similarity=-0.059 Sum_probs=45.7
Q ss_pred cCCCCEEEecCCCCCCh----------HHHHHhcCCeEEEecccCCCC--cc----cCHHHHHhhcc-CCeeEEEEcCCC
Q 018665 57 CSPGDEVIIPAPFWVSY----------PEMARIADATPVILPTRISEN--FL----LDPKVLESKLT-EKSRLLILCSPS 119 (352)
Q Consensus 57 ~~~~~~vl~~~~~~~~~----------~~~~~~~g~~v~~i~~~~~~~--~~----~d~~~l~~~l~-~~~~~i~i~~p~ 119 (352)
+++||+|-+..|..... ...++.+|.+|+.-+.-.... +. .-.++|.+++. +++++|++.--.
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 56889999998886531 234567899998877543221 11 12556666665 577888776666
Q ss_pred CCcccCCCH
Q 018665 120 NPTGSVYPK 128 (352)
Q Consensus 120 nptG~~~~~ 128 (352)
+-+-.++|.
T Consensus 120 yga~rlLp~ 128 (371)
T 3tla_A 120 DNSNSLLPF 128 (371)
T ss_dssp SCGGGGGGG
T ss_pred ccHHHHHhh
Confidence 655566553
No 343
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=31.36 E-value=1.1e+02 Score=24.78 Aligned_cols=97 Identities=8% Similarity=0.050 Sum_probs=48.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC----ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC--
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV----SYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-- 108 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~----~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-- 108 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-. .....++..+.++..+..+. -|.+.+++.++.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI-----RQVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3444555555544335566677788888876432211 12233445677777777653 255555555531
Q ss_pred ----CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 109 ----KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 109 ----~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+...+|.+.-..+.+. -.+.+++++..+
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4444443222222222 235555555544
No 344
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=31.15 E-value=2.4e+02 Score=23.89 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=21.9
Q ss_pred CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 109 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 109 ~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+.-+++.+.|..-+|..++.+.+ .++++++||+.=|=|.+
T Consensus 139 ~lPiilYn~P~~t~g~~l~~~~~---~~La~~~pnIvgiKdss 178 (318)
T 3qfe_A 139 PLPVVIYNFPGVCNGIDLDSDMI---TTIARKNPNVVGVKLTC 178 (318)
T ss_dssp SSCEEEEECCC----CCCCHHHH---HHHHHHCTTEEEEEESS
T ss_pred CCCEEEEeCCcccCCCCCCHHHH---HHHHhhCCCEEEEEeCC
Confidence 34455556665434888885444 44455566877776654
No 345
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.14 E-value=1.4e+02 Score=24.41 Aligned_cols=98 Identities=8% Similarity=0.108 Sum_probs=49.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCC--------CC--C------hHHHHHhcCCeEEEecccCCCCccc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF--------WV--S------YPEMARIADATPVILPTRISENFLL 97 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~--------~~--~------~~~~~~~~g~~v~~i~~~~~~~~~~ 97 (352)
++...+++|.++...=..+...|.+.|.+|++.+-. |. . ....++..+.++..+..+- -
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~ 87 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV-----R 87 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT-----T
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC-----C
Confidence 344556666665554456666777888888765321 11 1 1123344566777776542 2
Q ss_pred CHHHHHhhccC------CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 98 DPKVLESKLTE------KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 98 d~~~l~~~l~~------~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
|.+.+++.++. +...+|.+.-....+. -.+.+++++..+
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 55555555431 4555443332222222 235555555444
No 346
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=31.13 E-value=2e+02 Score=23.40 Aligned_cols=68 Identities=13% Similarity=0.003 Sum_probs=35.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.... ..++..+.++..+..+- -|.+.+++.++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 91 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV-----RSVPEIEALVA 91 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHH
Confidence 3445666655544445566667777877776542211121 22233466666666542 24555555443
No 347
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=31.12 E-value=52 Score=27.87 Aligned_cols=77 Identities=8% Similarity=0.154 Sum_probs=48.6
Q ss_pred CCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 68 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
|+|.++.++.+....++..+-++.+ .-++.++++++.+.+.+++-++. . +.++.+++.+.|+++.|+.+|
T Consensus 58 ~vy~sl~el~~~~~vD~avI~vP~~----~~~~~~~e~i~~Gi~~iv~~t~G----~--~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 58 PVFNTVKEAKEQTGATASVIYVPPP----FAAAAINEAIDAEVPLVVCITEG----I--PQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCHH----HHHHHHHHHHHTTCSEEEECCCC----C--CHHHHHHHHHHHTTCSSCEEE
T ss_pred eeechHHHhhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECCC----C--ChHHHHHHHHHHHhcCCcEEE
Confidence 4455666666644566555554421 24666777777788887665553 2 344567888888875367888
Q ss_pred ecccccc
Q 018665 148 SDEIYEH 154 (352)
Q Consensus 148 vD~~~~~ 154 (352)
-+.+.+.
T Consensus 128 GPnc~Gi 134 (305)
T 2fp4_A 128 GPNCPGV 134 (305)
T ss_dssp CSSSCEE
T ss_pred eCCCCeE
Confidence 6776554
No 348
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=30.97 E-value=63 Score=26.79 Aligned_cols=77 Identities=14% Similarity=0.064 Sum_probs=47.3
Q ss_pred CCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 018665 60 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVA 139 (352)
Q Consensus 60 ~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~ 139 (352)
|++|.+-. |+++...++..+.++..++.++..+.- ++.-.+.+-++...+++ ||..+-...+..|.++|+
T Consensus 141 g~kV~vIG--~fP~i~~~~~~~~~l~V~E~~p~~g~~--p~~~~~~~lp~~D~vii------TgstlvN~Tl~~lL~~~~ 210 (270)
T 3l5o_A 141 GKKVGVVG--HFPHLESLLEPICDLSILEWSPEEGDY--PLPASEFILPECDYVYI------TCASVVDKTLPRLLELSR 210 (270)
T ss_dssp TSEEEEES--CCTTHHHHHTTTSEEEEEESSCCTTCE--EGGGHHHHGGGCSEEEE------ETHHHHHTCHHHHHHHTT
T ss_pred CCEEEEEC--CchhHHHHHhcCCCEEEEECCCCCCCC--ChhHHHHhhccCCEEEE------EeehhhcCCHHHHHhhCC
Confidence 56777775 346777777888999999888654421 23333333346666666 343333333999999997
Q ss_pred hCCCEEEE
Q 018665 140 KHPRLLVL 147 (352)
Q Consensus 140 ~~~~~~li 147 (352)
+. ...++
T Consensus 211 ~a-~~vvl 217 (270)
T 3l5o_A 211 NA-RRITL 217 (270)
T ss_dssp TS-SEEEE
T ss_pred CC-CEEEE
Confidence 65 44433
No 349
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=30.97 E-value=1.1e+02 Score=25.63 Aligned_cols=23 Identities=9% Similarity=0.003 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecccc
Q 018665 129 NLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 129 ~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
+.++++++.|.++ |+.+|+|-.+
T Consensus 72 ~~~~~~v~~~~~~-gi~vild~h~ 94 (305)
T 1h1n_A 72 ADLIATVNAITQK-GAYAVVDPHN 94 (305)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEECC
T ss_pred HHHHHHHHHHHHC-CCEEEEeccc
Confidence 4588899999999 9999999643
No 350
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=30.85 E-value=1.9e+02 Score=22.61 Aligned_cols=94 Identities=6% Similarity=-0.000 Sum_probs=48.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH----HhcCCeEEEecccCCCCcccCHHHHHhhccC-----
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE----- 108 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~----~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~----- 108 (352)
.+++|.++...=..+...|.+.|.+|++..-......... +..+.++..+..+. -|.+.+++.++.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 4566655544445566667777877776644322222222 24467777776653 256777666642
Q ss_pred -CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 109 -KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 109 -~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+...++.+....+.+. -.+.+++++..+
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 4555554333332222 235555555443
No 351
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=30.77 E-value=1.6e+02 Score=23.69 Aligned_cols=91 Identities=8% Similarity=-0.043 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCC---CChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCc
Q 018665 46 KQSILQAVLAVCSPGDEVIIPAPFW---VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 122 (352)
Q Consensus 46 ~~a~~~~~~~l~~~~~~vl~~~~~~---~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~npt 122 (352)
|+++..+.++. ..|.+|++..|.- .+ .....+.|..+..+++... +++.+.+ .+..+|++...+.-+
T Consensus 34 T~lL~~~~r~~-~~g~kvli~kp~~D~Ryg-~~i~sr~G~~~~a~~i~~~-------~di~~~~-~~~dvViIDEaQF~~ 103 (234)
T 2orv_A 34 TELMRRVRRFQ-IAQYKCLVIKYAKDTRYS-SSFCTHDRNTMEALPACLL-------RDVAQEA-LGVAVIGIDEGQFFP 103 (234)
T ss_dssp HHHHHHHHHHH-TTTCCEEEEEETTCCCC------------CEEEEESSG-------GGGHHHH-TTCSEEEESSGGGCT
T ss_pred HHHHHHHHHHH-HCCCeEEEEeecCCccch-HHHHhhcCCeeEEEecCCH-------HHHHHHh-ccCCEEEEEchhhhh
Confidence 45555555554 4566777665432 13 4566677887777665421 2233333 357788888777643
Q ss_pred ccCCCHHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 123 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 123 G~~~~~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
+ +.++++++.+. ++.+|+=.-..+
T Consensus 104 ----~---v~el~~~l~~~-gi~VI~~GL~~D 127 (234)
T 2orv_A 104 ----D---IVEFCEAMANA-GKTVIVAALDGT 127 (234)
T ss_dssp ----T---HHHHHHHHHHT-TCEEEEECCSBC
T ss_pred ----h---HHHHHHHHHhC-CCEEEEEecccc
Confidence 2 77888888888 999997655544
No 352
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=30.67 E-value=2.3e+02 Score=23.41 Aligned_cols=98 Identities=12% Similarity=0.099 Sum_probs=48.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh---cC-CeEEEecccCCCCcccCHHHHHhhcc--
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---AD-ATPVILPTRISENFLLDPKVLESKLT-- 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~---~g-~~v~~i~~~~~~~~~~d~~~l~~~l~-- 107 (352)
++...+++|.++...=..+...|.+.|.+|++.+-.-.......+. .+ .++..+..+- -|.+.+++.++
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 113 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTV 113 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHH
Confidence 3344555555554433556667778888887765444444433332 33 4566665542 24555555443
Q ss_pred ----CCeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 108 ----EKSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 108 ----~~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
.+...+|.+.-..+.+. -.+.+++++..+
T Consensus 114 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 114 VDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 14454443332222222 235555555554
No 353
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=30.66 E-value=78 Score=29.06 Aligned_cols=68 Identities=16% Similarity=0.103 Sum_probs=39.9
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+.+...+.++.-+.+.++.+|.+..+..-++-.... ........|..++.+++++|.+.|+++ ++-||
T Consensus 181 d~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga----~~~~~~~~~g~YT~~di~eiv~yA~~r-gI~VI 248 (512)
T 1jak_A 181 DRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGG----STEVGGGPGGYYTKAEYKEIVRYAASR-HLEVV 248 (512)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTT----SCCTTSSCCCCBCHHHHHHHHHHHHHT-TCEEE
T ss_pred HHHHHcCCcEEEEEeccCCCceehhhhhHHHHhhcC----ccccCCCCCCCCCHHHHHHHHHHHHHc-CCEEE
Confidence 334456777776666655555554333222111000 001112235678999999999999999 99888
No 354
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=30.62 E-value=48 Score=30.16 Aligned_cols=74 Identities=9% Similarity=0.083 Sum_probs=49.3
Q ss_pred cCCCCCChHHHHHhc-CCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 66 PAPFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 66 ~~~~~~~~~~~~~~~-g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
.-|.|..|..+.+.. ..++..+-++.. .-++.++++.+.+.+ +++.+-+.+ .+..+++.++|+++ |+
T Consensus 20 ~~Pv~~~~~~~~~~p~~~DlavI~vPa~----~v~~~v~e~~~~Gv~-~viis~Gf~------~~~~~~l~~~A~~~-g~ 87 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLPDANLALISVAGE----YAAELANQALDRNLN-VMMFSDNVT------LEDEIQLKTRAREK-GL 87 (480)
T ss_dssp CCEEESSHHHHHHHSTTCCEEEECSCHH----HHHHHHHHHHHTTCE-EEECCCCCC------HHHHHHHHHHHHHT-TC
T ss_pred CCcccchHHHHHhcCCCCCEEEEecCHH----HHHHHHHHHHhcCCC-EEEECCCCC------HHHHHHHHHHHHHc-CC
Confidence 356777787777664 455555554421 356788888888888 444433322 56678999999999 99
Q ss_pred EEEeccc
Q 018665 145 LVLSDEI 151 (352)
Q Consensus 145 ~livD~~ 151 (352)
.++-=++
T Consensus 88 rliGPNc 94 (480)
T 3dmy_A 88 LVMGPDC 94 (480)
T ss_dssp CEECSSC
T ss_pred EEEecCc
Confidence 8885444
No 355
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=30.43 E-value=1.3e+02 Score=26.99 Aligned_cols=98 Identities=10% Similarity=0.060 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhcCCCCEEEe-c-CCCCCChHHHH----HhcCCeEEEecccCCCCcccCHHHH-----HhhccCCeeEEE
Q 018665 46 KQSILQAVLAVCSPGDEVII-P-APFWVSYPEMA----RIADATPVILPTRISENFLLDPKVL-----ESKLTEKSRLLI 114 (352)
Q Consensus 46 ~~a~~~~~~~l~~~~~~vl~-~-~~~~~~~~~~~----~~~g~~v~~i~~~~~~~~~~d~~~l-----~~~l~~~~~~i~ 114 (352)
|.....+...+.+.|.+|++ . ++........+ +..|..+...+. ..|+..+ +.+-..+..+++
T Consensus 114 TTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~gvpv~~~~~------~~dp~~i~~~al~~a~~~~~DvVI 187 (443)
T 3dm5_A 114 TTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQ------EKDAIKLAKEGVDYFKSKGVDIII 187 (443)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGTCEEECCTT------CCCHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhcCCcEEecCC------CCCHHHHHHHHHHHHHhCCCCEEE
Confidence 44444455556666666543 3 33333332333 345655433321 1244333 222234678888
Q ss_pred EcCCCCCcccCCCHH---HHHHHHHHHHhCCCEEEEeccccc
Q 018665 115 LCSPSNPTGSVYPKN---LLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 115 i~~p~nptG~~~~~~---~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
+..+.-. ..+.+ +++.+.+..+.. .+++++|...+
T Consensus 188 IDTaGrl---~~d~~lm~el~~i~~~~~pd-~vlLVvDA~~g 225 (443)
T 3dm5_A 188 VDTAGRH---KEDKALIEEMKQISNVIHPH-EVILVIDGTIG 225 (443)
T ss_dssp EECCCCS---SCCHHHHHHHHHHHHHHCCS-EEEEEEEGGGG
T ss_pred EECCCcc---cchHHHHHHHHHHHHhhcCc-eEEEEEeCCCc
Confidence 8777321 12222 344555555555 78999997653
No 356
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=30.40 E-value=47 Score=24.24 Aligned_cols=70 Identities=13% Similarity=0.172 Sum_probs=39.2
Q ss_pred HHHHh-cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEeccc
Q 018665 75 EMARI-ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 75 ~~~~~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
..++. .|.++..+.--..++ + .++.+.++++-.-+++..|. |.+. .+ ..+...|.+.|..+ |++++..-+
T Consensus 42 ~~L~e~~Gl~v~~v~k~~~eG---~-p~I~d~I~~geIdlVInt~~-pl~~-~~h~~D~~~IrR~A~~~-~IP~~T~la 113 (134)
T 2xw6_A 42 RRIEEATGLTVEKLLSGPLGG---D-QQMGARVAEGRILAVIFFRD-PLTA-QPHEPDVQALLRVCDVH-GVPLATNPM 113 (134)
T ss_dssp HHHHHHHCCCCEECSCGGGTH---H-HHHHHHHHTTCEEEEEEECC-TTTC-CTTSCCSHHHHHHHHHH-TCCEECSHH
T ss_pred HHHHHhhCceEEEEEecCCCC---c-chHHHHHHCCCccEEEEccC-cccC-CCccchHHHHHHHHHHc-CCCeEcCHH
Confidence 34444 677777664221011 3 35666676554444544443 2221 12 23388999999999 999886543
No 357
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=30.38 E-value=1.9e+02 Score=23.64 Aligned_cols=96 Identities=13% Similarity=0.051 Sum_probs=48.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhccC----
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE---- 108 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~---- 108 (352)
...+++|.++...=..+...|.+.|.+|++..-.-.... ..++..+.++..+..+- -|.+.+++.++.
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAVAAAVER 98 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 345566655544445566677788888876653322222 22334566777776542 255555554431
Q ss_pred --CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 109 --KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 109 --~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+...+|.+.-..+.+ ...+.+++++..+
T Consensus 99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 99 FGPIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 445444333222222 2245555555443
No 358
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=30.32 E-value=1.3e+02 Score=24.11 Aligned_cols=64 Identities=14% Similarity=0.152 Sum_probs=36.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
+...+++|.+++..=..+...|.+.|.+|++..- ......+..+.++..+..+.. |.+.+++.+
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~ 71 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADVT-----DEAAVASAL 71 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHTCTTEEEEECCTT-----CHHHHHHHH
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHhcCCceEEEECCCC-----CHHHHHHHH
Confidence 3445666655544345566677777877776543 334556666777777766532 455555544
No 359
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=30.17 E-value=2.3e+02 Score=23.21 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=52.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC-------C---hHHHHHhcCCeEEEecccCCCCcccCHHHHH
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-------S---YPEMARIADATPVILPTRISENFLLDPKVLE 103 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~-------~---~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~ 103 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-. . ....++..+.++..+..+-. |.+.++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~ 81 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGDAVA 81 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHH
Confidence 34556667766655445666778888888776543322 1 22334556778888876532 455555
Q ss_pred hhcc------CCeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 104 SKLT------EKSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 104 ~~l~------~~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+.++ .+...+|.+.-....+. -.+.+++++..+
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5443 14555554333222222 245555665554
No 360
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=30.15 E-value=2.2e+02 Score=23.15 Aligned_cols=65 Identities=8% Similarity=-0.032 Sum_probs=34.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
..+++|.++...=..+...|.+.|.+|++..-.-.... ..++..+.++..+..+. -|.+.+++.+
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~d~~~v~~~~ 112 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-----SKKEEISEVI 112 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC-----CCHHHHHHHH
Confidence 45666655544335566678888888877432111111 12233466676666542 2556665555
No 361
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=30.13 E-value=91 Score=26.46 Aligned_cols=72 Identities=13% Similarity=0.129 Sum_probs=49.7
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.|..+...+....++++.+.++.. .-.+...++++.+ +-|++.-|-. .+.++.+++.++|+++ |+.+.+
T Consensus 54 ~~~~~~~ll~~~~vD~V~i~tp~~----~H~~~~~~al~~G-khVl~EKP~a-----~~~~e~~~l~~~a~~~-~~~~~v 122 (334)
T 3ohs_X 54 AYGSYEELAKDPNVEVAYVGTQHP----QHKAAVMLCLAAG-KAVLCEKPMG-----VNAAEVREMVTEARSR-GLFLME 122 (334)
T ss_dssp EESSHHHHHHCTTCCEEEECCCGG----GHHHHHHHHHHTT-CEEEEESSSS-----SSHHHHHHHHHHHHHT-TCCEEE
T ss_pred ccCCHHHHhcCCCCCEEEECCCcH----HHHHHHHHHHhcC-CEEEEECCCC-----CCHHHHHHHHHHHHHh-CCEEEE
Confidence 466788888877888888877632 2345555556544 4566666643 3477899999999999 988886
Q ss_pred ccc
Q 018665 149 DEI 151 (352)
Q Consensus 149 D~~ 151 (352)
--.
T Consensus 123 ~~~ 125 (334)
T 3ohs_X 123 AIW 125 (334)
T ss_dssp ECG
T ss_pred EEh
Confidence 543
No 362
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=29.95 E-value=2.5e+02 Score=23.58 Aligned_cols=70 Identities=17% Similarity=0.219 Sum_probs=35.7
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++..|+.-..+-.+.-.....+.+.+.+..+ .+.-+++.+.|.. ||..++.+.+.+| + ++||+.=|=|.+
T Consensus 105 A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~-tg~~l~~~~~~~L---a-~~pnIvgiKdss 179 (307)
T 3s5o_A 105 MAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPAN-TGLDLPVDAVVTL---S-QHPNIVGMXDSG 179 (307)
T ss_dssp HHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHH-HSCCCCHHHHHHH---H-TSTTEEEEEECS
T ss_pred HHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcc-cCCCCCHHHHHHH---h-cCCCEEEEEcCC
Confidence 3456766655543321111135555554432 1334445455532 7888885554444 4 456877776654
No 363
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=29.93 E-value=2e+02 Score=24.52 Aligned_cols=71 Identities=8% Similarity=0.026 Sum_probs=44.2
Q ss_pred cCCCCEEEecCCCCCCh----------HHHHHhcCCeEEEecccCCCC-c-----ccCHHHHHhhcc-CCeeEEEEcCCC
Q 018665 57 CSPGDEVIIPAPFWVSY----------PEMARIADATPVILPTRISEN-F-----LLDPKVLESKLT-EKSRLLILCSPS 119 (352)
Q Consensus 57 ~~~~~~vl~~~~~~~~~----------~~~~~~~g~~v~~i~~~~~~~-~-----~~d~~~l~~~l~-~~~~~i~i~~p~ 119 (352)
+++||+|-+..|....- ...++.+|.+|+.-+.-.... + ..-.++|.+++. +++++|++.--.
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 57889998888876532 134567899998877432221 1 112455666664 577888776666
Q ss_pred CCcccCCC
Q 018665 120 NPTGSVYP 127 (352)
Q Consensus 120 nptG~~~~ 127 (352)
+-+-.++|
T Consensus 89 ~g~~rlL~ 96 (331)
T 4e5s_A 89 YNSNGLLK 96 (331)
T ss_dssp SCGGGGGG
T ss_pred ccHHHHHh
Confidence 55556655
No 364
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=29.87 E-value=1.3e+02 Score=25.67 Aligned_cols=73 Identities=11% Similarity=0.113 Sum_probs=46.3
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.|..+...+....++++.+.++... ..+...++++.+ +-|++.-|-. .+.++.+++.++|+++ ++.+.+
T Consensus 54 ~~~~~~~~l~~~~~D~V~i~tp~~~----h~~~~~~al~~g-k~vl~EKP~~-----~~~~~~~~l~~~a~~~-~~~~~v 122 (354)
T 3db2_A 54 GDATMEALLAREDVEMVIITVPNDK----HAEVIEQCARSG-KHIYVEKPIS-----VSLDHAQRIDQVIKET-GVKFLC 122 (354)
T ss_dssp CCSSHHHHHHCSSCCEEEECSCTTS----HHHHHHHHHHTT-CEEEEESSSC-----SSHHHHHHHHHHHHHH-CCCEEE
T ss_pred CcCCHHHHhcCCCCCEEEEeCChHH----HHHHHHHHHHcC-CEEEEccCCC-----CCHHHHHHHHHHHHHc-CCeEEE
Confidence 3666667776667777777766322 344444555433 3455555532 3467899999999999 888877
Q ss_pred cccc
Q 018665 149 DEIY 152 (352)
Q Consensus 149 D~~~ 152 (352)
.-.+
T Consensus 123 ~~~~ 126 (354)
T 3db2_A 123 GHSS 126 (354)
T ss_dssp ECGG
T ss_pred eech
Confidence 6544
No 365
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=29.82 E-value=1.1e+02 Score=26.34 Aligned_cols=51 Identities=14% Similarity=0.266 Sum_probs=34.0
Q ss_pred HHHHHHHH-hcCCCCCCCcE-EEeC--------ChHHHHHHHHHHhc---CCCCEEEecCCCCCCh
Q 018665 21 QQFVINLK-ENGLSYTPDQI-LVSN--------GAKQSILQAVLAVC---SPGDEVIIPAPFWVSY 73 (352)
Q Consensus 21 ~~ia~~~~-~~~~~~~~~~i-~~~~--------g~~~a~~~~~~~l~---~~~~~vl~~~~~~~~~ 73 (352)
+.++++|. +.|+ ..++| +++. -+.+.|..++..|. +++|.+++.-..|...
T Consensus 78 ~~m~~~L~~~~Gf--~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYFSGHG~q 141 (350)
T 4f6o_A 78 HNIFNFLTNGYGY--SSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGGQ 141 (350)
T ss_dssp HHHHHHHHHHSCC--CGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEEESCEEE
T ss_pred HHHHHHHHHhcCC--CccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCcee
Confidence 56777777 5564 34555 4554 35677777777764 4689988888777654
No 366
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=29.82 E-value=39 Score=30.48 Aligned_cols=29 Identities=7% Similarity=0.196 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 127 PKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 127 ~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
+.++++++++.|+++ |+.||+|-|.-+..
T Consensus 75 t~~df~~lv~~aH~~-Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNV-GVRIYVDAVINHMC 103 (496)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHC-CCEEEEEEccCcCC
Confidence 467899999999999 99999999987653
No 367
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=29.75 E-value=2.1e+02 Score=22.64 Aligned_cols=78 Identities=8% Similarity=0.047 Sum_probs=40.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc----
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT---- 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---- 107 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.... ..++..+.++..+..+. -|.+.+++.++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALADFAIS 84 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 4455666655444335566677788877776543211111 22233455666665542 25566665553
Q ss_pred --CCeeEEEEcC
Q 018665 108 --EKSRLLILCS 117 (352)
Q Consensus 108 --~~~~~i~i~~ 117 (352)
.+...+|.+.
T Consensus 85 ~~~~~d~vi~~A 96 (255)
T 1fmc_A 85 KLGKVDILVNNA 96 (255)
T ss_dssp HHSSCCEEEECC
T ss_pred hcCCCCEEEECC
Confidence 2556555443
No 368
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=29.62 E-value=1.3e+02 Score=26.10 Aligned_cols=53 Identities=17% Similarity=0.026 Sum_probs=28.1
Q ss_pred cEEEeCChHHHHHHHHH-HhcCCCCEEEecCCCCCC-hH------HHHHhcCCeEEEeccc
Q 018665 38 QILVSNGAKQSILQAVL-AVCSPGDEVIIPAPFWVS-YP------EMARIADATPVILPTR 90 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~-~l~~~~~~vl~~~~~~~~-~~------~~~~~~g~~v~~i~~~ 90 (352)
.+-..+.+...++.++. .=+.+|+-+++..+.-.+ .. ..+...|..+.++...
T Consensus 51 ~~~~i~TG~~~LD~~Lg~GGl~~G~li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E 111 (366)
T 1xp8_A 51 DVQVVSTGSLSLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAE 111 (366)
T ss_dssp CCCEECCSCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCceecCCCHHHHHHhCCCCccCCcEEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECC
Confidence 44445556667776665 222456666665443222 11 1122357788888875
No 369
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=29.60 E-value=2e+02 Score=23.75 Aligned_cols=96 Identities=13% Similarity=0.017 Sum_probs=50.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEe-cCCCCCChH--HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEE
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVII-PAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 114 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl~-~~~~~~~~~--~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~ 114 (352)
.|++|.++...=..++..|.+.|.+|.+ ....-.... ..+...|++++..++. |.+.+.++++ +...|+
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~-------d~~~l~~a~~-~~d~vi 84 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELD-------EHEKLVELMK-KVDVVI 84 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTT-------CHHHHHHHHT-TCSEEE
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCC-------CHHHHHHHHc-CCCEEE
Confidence 5777754333224455566555655543 332211111 1234567776665542 6788888886 466665
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCC-EEEEe
Q 018665 115 LCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLS 148 (352)
Q Consensus 115 i~~p~nptG~~~~~~~l~~l~~~~~~~~~-~~liv 148 (352)
.+.... . ... .+.+++.|++. + +--++
T Consensus 85 ~~a~~~--~-~~~---~~~l~~aa~~~-g~v~~~v 112 (318)
T 2r6j_A 85 SALAFP--Q-ILD---QFKILEAIKVA-GNIKRFL 112 (318)
T ss_dssp ECCCGG--G-STT---HHHHHHHHHHH-CCCCEEE
T ss_pred ECCchh--h-hHH---HHHHHHHHHhc-CCCCEEE
Confidence 443321 1 222 56788888877 6 53333
No 370
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=29.51 E-value=2.1e+02 Score=22.69 Aligned_cols=78 Identities=18% Similarity=0.245 Sum_probs=41.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc----
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT---- 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---- 107 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.... ..++..+.++..+..+. -|.+.+++.++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDV-----TNTESVQNAVRSVHE 86 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 4456677765544445566677777878776543221111 22333466666666542 25566655553
Q ss_pred --CCeeEEEEcC
Q 018665 108 --EKSRLLILCS 117 (352)
Q Consensus 108 --~~~~~i~i~~ 117 (352)
.+...+|.+.
T Consensus 87 ~~~~id~vi~~A 98 (260)
T 3awd_A 87 QEGRVDILVACA 98 (260)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 2455555443
No 371
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=29.50 E-value=2.3e+02 Score=23.02 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=49.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC---------------ChHHHHHhcCCeEEEecccCCCCcccC
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV---------------SYPEMARIADATPVILPTRISENFLLD 98 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~---------------~~~~~~~~~g~~v~~i~~~~~~~~~~d 98 (352)
++...+++|.++...=..+...|.+.|.+|++.+-.-. .....++..+.++..+..+- -|
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~ 82 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV-----KD 82 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCC-----CC
Confidence 34455666665554445566777788888776543210 01123345577777776653 24
Q ss_pred HHHHHhhccC------CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 99 PKVLESKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 99 ~~~l~~~l~~------~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
.+.+++.++. +...+|.+.-....+ .-.+.+++++..+
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5555555431 455544333222222 2245555555443
No 372
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=29.45 E-value=2.3e+02 Score=23.07 Aligned_cols=98 Identities=10% Similarity=0.093 Sum_probs=50.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhccC--
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 108 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-- 108 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-..... .++..+.++..+..+. -|.+.+++.++.
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDV-----TQPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344566666665544455666777888887776543333332 3344566666666542 255555555531
Q ss_pred ----CeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 109 ----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 109 ----~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+...+|.+.-....+ .-.+.++++++.+
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 455555433222222 2245555655544
No 373
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=29.34 E-value=59 Score=26.27 Aligned_cols=64 Identities=20% Similarity=0.144 Sum_probs=34.2
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCC-eeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEK-SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~-~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
..++..|.++..+..+.+.+..-..+.++..+..+ +..+++...... . ..+..+.+.+. ++++|
T Consensus 24 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~----~----~~~~~~~~~~~-~ipvV 88 (276)
T 3ksm_A 24 KAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAE----D----LTPSVAQYRAR-NIPVL 88 (276)
T ss_dssp HHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTT----T----THHHHHHHHHT-TCCEE
T ss_pred HHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHH----H----HHHHHHHHHHC-CCcEE
Confidence 45567899988876532222111123455555567 888887544221 1 23444455566 76555
No 374
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=29.27 E-value=2.3e+02 Score=23.08 Aligned_cols=97 Identities=9% Similarity=0.123 Sum_probs=48.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC-ChHHHH---Hh-cCCeEEEecccCCCCcccCHHHHHhhcc--
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMA---RI-ADATPVILPTRISENFLLDPKVLESKLT-- 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~-~~~~~~---~~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~-- 107 (352)
....+++|.++...=..+...|.+.|.+|++.+-.-. ...... +. .+.++..+..+- -|.+.+++.++
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMV 98 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHH
Confidence 4455666666655445566677788888887654221 112222 22 256677776542 24555555443
Q ss_pred ----CCeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 108 ----EKSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 108 ----~~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
.+...+|.+......+. -.+.+++++..+
T Consensus 99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 14455443333222222 235555555544
No 375
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=29.22 E-value=88 Score=28.82 Aligned_cols=68 Identities=12% Similarity=0.174 Sum_probs=41.7
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+.+...+.++.-+.+.++.+|.+..+.+-+.-..... .......|..++.+++++|.+.|+++ ++-||
T Consensus 206 d~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~r-gI~VI 273 (525)
T 3gh5_A 206 DLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAER-YIEVI 273 (525)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTT-TCEEE
T ss_pred HHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHc-CCEEE
Confidence 4445667777777777666666554332221111000 01112335678999999999999999 99877
No 376
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.08 E-value=1.5e+02 Score=24.89 Aligned_cols=97 Identities=8% Similarity=0.124 Sum_probs=48.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCC-------CC--------ChHHHHHhcCCeEEEecccCCCCcccCH
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-------WV--------SYPEMARIADATPVILPTRISENFLLDP 99 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~-------~~--------~~~~~~~~~g~~v~~i~~~~~~~~~~d~ 99 (352)
+...+++|.++...=..+...|.+.|.+|++.+-. +. .....++..+.++..+..+. -|.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~ 119 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV-----RDL 119 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-----CCH
Confidence 34455555555444455666777888887765322 10 01123345577777776653 255
Q ss_pred HHHHhhccC------CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 100 KVLESKLTE------KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 100 ~~l~~~l~~------~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+.+++.++. +...+|.+.-....+. -.+.+++++..+
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 555555531 4455443332222222 245555555544
No 377
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=29.01 E-value=1.6e+02 Score=24.29 Aligned_cols=10 Identities=20% Similarity=0.381 Sum_probs=4.1
Q ss_pred HhcCCeEEEe
Q 018665 78 RIADATPVIL 87 (352)
Q Consensus 78 ~~~g~~v~~i 87 (352)
...|+.-..+
T Consensus 122 ~~aGvdGvIi 131 (271)
T 3nav_A 122 QKAGVDSVLI 131 (271)
T ss_dssp HHHTCCEEEE
T ss_pred HHCCCCEEEE
Confidence 3344444333
No 378
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=28.99 E-value=1.2e+02 Score=25.67 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=36.7
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++..|+.-..+-.+.- +..+.+.+.+..+ -+.-+++.+.|. .||..++.+. +.++++++||+.=|=|.+
T Consensus 113 A~~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn~P~-~tg~~l~~~~---~~~La~~~pnIvgiKdss 186 (315)
T 3si9_A 113 AEKAGADAVLVVTPYY--NRPNQRGLYTHFSSIAKAISIPIIIYNIPS-RSVIDMAVET---MRDLCRDFKNIIGVKDAT 186 (315)
T ss_dssp HHHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEECHH-HHSCCCCHHH---HHHHHHHCTTEEEEEECS
T ss_pred HHhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHcCCCCEEEEeCch-hhCCCCCHHH---HHHHHhhCCCEEEEEeCC
Confidence 3455665555443321 2244455544332 134455555554 3788888554 445555567887776654
No 379
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=28.87 E-value=2.1e+02 Score=22.52 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=19.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 67 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~ 67 (352)
+...+++|.++...=..+...|.+.|.+|++..
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 37 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITG 37 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 344555555544433556666777787777654
No 380
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=28.84 E-value=1.1e+02 Score=25.45 Aligned_cols=18 Identities=22% Similarity=0.405 Sum_probs=12.4
Q ss_pred hHHHHHhcCCeEEEeccc
Q 018665 73 YPEMARIADATPVILPTR 90 (352)
Q Consensus 73 ~~~~~~~~g~~v~~i~~~ 90 (352)
....++..|++.+.+++.
T Consensus 38 d~~~l~~~G~n~vR~~i~ 55 (317)
T 3aof_A 38 FFDIIKEAGFSHVRIPIR 55 (317)
T ss_dssp HHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHcCCCEEEEecc
Confidence 345666788888888753
No 381
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=28.22 E-value=2.3e+02 Score=22.73 Aligned_cols=68 Identities=13% Similarity=0.117 Sum_probs=35.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH---hc--CCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IA--DATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~---~~--g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+ .. +.++..+..+- -|.+.+++.++
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 84 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-----SDEAQVEAYVT 84 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-----CCHHHHHHHHH
Confidence 44556666555444455666777778777765432212222222 12 55666666542 24555555553
No 382
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=28.22 E-value=1.8e+02 Score=24.53 Aligned_cols=98 Identities=10% Similarity=-0.031 Sum_probs=52.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEec-CCCCCC--h---HHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC-
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVS--Y---PEMARIADATPVILPTRISENFLLDPKVLESKLTE- 108 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~-~~~~~~--~---~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~- 108 (352)
...|++|.++...=..++..|.+.|.+|.+. ...-.. - ...+...+++++..++. |.+.+.+++++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~-------d~~~l~~~~~~~ 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN-------EQEAMEKILKEH 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT-------CHHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC-------CHHHHHHHHhhC
Confidence 3467777654333344556665555544433 322111 1 12334567777666543 67888888763
Q ss_pred CeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCC-EEEEe
Q 018665 109 KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPR-LLVLS 148 (352)
Q Consensus 109 ~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~-~~liv 148 (352)
++..||.+.. .|..| ...+++.|++. + +..++
T Consensus 83 ~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~-g~v~~~v 116 (346)
T 3i6i_A 83 EIDIVVSTVGGESILD-------QIALVKAMKAV-GTIKRFL 116 (346)
T ss_dssp TCCEEEECCCGGGGGG-------HHHHHHHHHHH-CCCSEEE
T ss_pred CCCEEEECCchhhHHH-------HHHHHHHHHHc-CCceEEe
Confidence 5666665443 23222 46888888887 7 54443
No 383
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=28.13 E-value=1.7e+02 Score=23.27 Aligned_cols=66 Identities=12% Similarity=0.008 Sum_probs=34.4
Q ss_pred CCcEEEeCChHHHH-HHHHHHhcCCCCEEEecC-CCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 36 PDQILVSNGAKQSI-LQAVLAVCSPGDEVIIPA-PFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 36 ~~~i~~~~g~~~a~-~~~~~~l~~~~~~vl~~~-~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
++..++..|++.++ ..+...|.+.|.+|++.. ..-.... ..++..+.++..+..+- -|.+.+++.+
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 82 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAF 82 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHH
Confidence 33444444444555 555666778887777643 3333322 33445566666666542 2455555544
No 384
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=28.03 E-value=2.3e+02 Score=22.64 Aligned_cols=68 Identities=12% Similarity=-0.030 Sum_probs=37.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-..... .++..+.++..+..+. -|.+.+++.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-----SSRSERQELM 77 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHH
Confidence 345567777665554455666777778787765422111211 2233466776666542 2555555554
No 385
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=27.68 E-value=1.1e+02 Score=26.26 Aligned_cols=73 Identities=12% Similarity=0.131 Sum_probs=47.2
Q ss_pred CCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 68 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 68 ~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+.|..+...+....++++.+..+.. .-.+...++++.+ +-|++.-|-. .+.++.+++.++|+++ |+.+.
T Consensus 52 ~~~~~~~~ll~~~~~D~V~i~tp~~----~h~~~~~~al~aG-khVl~EKP~a-----~~~~ea~~l~~~a~~~-g~~~~ 120 (359)
T 3e18_A 52 KIYESYEAVLADEKVDAVLIATPND----SHKELAISALEAG-KHVVCEKPVT-----MTSEDLLAIMDVAKRV-NKHFM 120 (359)
T ss_dssp CBCSCHHHHHHCTTCCEEEECSCGG----GHHHHHHHHHHTT-CEEEEESSCC-----SSHHHHHHHHHHHHHH-TCCEE
T ss_pred ceeCCHHHHhcCCCCCEEEEcCCcH----HHHHHHHHHHHCC-CCEEeeCCCc-----CCHHHHHHHHHHHHHh-CCeEE
Confidence 4566777777766777777776532 2344455555534 4455555532 3477899999999999 88877
Q ss_pred eccc
Q 018665 148 SDEI 151 (352)
Q Consensus 148 vD~~ 151 (352)
+--.
T Consensus 121 v~~~ 124 (359)
T 3e18_A 121 VHQN 124 (359)
T ss_dssp EECG
T ss_pred EEee
Confidence 6543
No 386
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=27.60 E-value=2.1e+02 Score=22.85 Aligned_cols=34 Identities=9% Similarity=0.121 Sum_probs=20.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 68 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~ 68 (352)
....+++|.++...=..+...|.+.|.+|++..-
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 3445666655544445566667777878877643
No 387
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=27.58 E-value=2.4e+02 Score=22.71 Aligned_cols=95 Identities=8% Similarity=-0.039 Sum_probs=48.4
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEc
Q 018665 39 ILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 116 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l~~~--~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~ 116 (352)
|++|.++...=..++..|.+. |.+|.+..-.-... ..+...+.+++..++ .|.+.+.++++ +...|+.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~D~-------~d~~~l~~~~~-~~d~vi~~ 73 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-STLADQGVEVRHGDY-------NQPESLQKAFA-GVSKLLFI 73 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-HHHHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEEC
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-hHHhhcCCeEEEecc-------CCHHHHHHHHh-cCCEEEEc
Confidence 555544333334556667665 65555433211122 223344665554443 26788888876 56666654
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 117 SPSNPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 117 ~p~nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
...++. ..........+++.|++. ++
T Consensus 74 a~~~~~-~~~n~~~~~~l~~a~~~~-~~ 99 (287)
T 2jl1_A 74 SGPHYD-NTLLIVQHANVVKAARDA-GV 99 (287)
T ss_dssp CCCCSC-HHHHHHHHHHHHHHHHHT-TC
T ss_pred CCCCcC-chHHHHHHHHHHHHHHHc-CC
Confidence 433221 100123356778888887 65
No 388
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=27.48 E-value=2.3e+02 Score=23.35 Aligned_cols=69 Identities=9% Similarity=0.001 Sum_probs=35.9
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-..... .++..+.++..+..+. -|.+.+++.++
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 103 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV-----TDEDGIQAMVA 103 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC-----CCHHHHHHHHH
Confidence 344556666655544455666777778787765432111111 2233455555555442 25555555543
No 389
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=27.44 E-value=33 Score=22.69 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCCEEEEeccc
Q 018665 131 LDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 131 l~~l~~~~~~~~~~~livD~~ 151 (352)
-.+|.++|+++ |++++.|..
T Consensus 29 A~~I~~~A~e~-~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELY-DIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHT-TCCEEECHH
T ss_pred HHHHHHHHHHc-CCCEEeCHH
Confidence 77899999999 999999865
No 390
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=27.35 E-value=2.7e+02 Score=23.27 Aligned_cols=69 Identities=13% Similarity=0.207 Sum_probs=36.6
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhcc---C--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLT---E--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
.++..|+.-..+-.+.- +..+.+.+.+..+ + +.-+++.+.|. .||..++.+.+.+| + ++||+.=|=|.
T Consensus 105 ~a~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn~P~-~tg~~l~~~~~~~L---a-~~pnIvgiKds 177 (304)
T 3l21_A 105 ACAAEGAHGLLVVTPYY--SKPPQRGLQAHFTAVADATELPMLLYDIPG-RSAVPIEPDTIRAL---A-SHPNIVGVXDA 177 (304)
T ss_dssp HHHHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHTSCSSCEEEEECHH-HHSSCCCHHHHHHH---H-TSTTEEEEEEC
T ss_pred HHHHcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEeCcc-ccCCCCCHHHHHHH---h-cCCCEEEEECC
Confidence 33456766655544421 2245555544432 1 33444544443 26888885555444 4 55687777665
Q ss_pred c
Q 018665 151 I 151 (352)
Q Consensus 151 ~ 151 (352)
+
T Consensus 178 s 178 (304)
T 3l21_A 178 K 178 (304)
T ss_dssp S
T ss_pred C
Confidence 4
No 391
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=27.24 E-value=1.2e+02 Score=28.07 Aligned_cols=78 Identities=14% Similarity=0.050 Sum_probs=48.2
Q ss_pred CCCCEEEecCCCCCCh-------HHHHHhcCCeEEEecccC-CCCcccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCH
Q 018665 58 SPGDEVIIPAPFWVSY-------PEMARIADATPVILPTRI-SENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPK 128 (352)
Q Consensus 58 ~~~~~vl~~~~~~~~~-------~~~~~~~g~~v~~i~~~~-~~~~~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~ 128 (352)
++++.|++.....++. .+.+...|++++...... .-....|.++|...++. +++.++..+- . .
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHG-----e---~ 408 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHG-----E---V 408 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESB-----C---H
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcC-----C---H
Confidence 6778999888777765 344557788887653111 11223577888877753 5666665442 2 2
Q ss_pred HHHHHHHHHHHhCCCE
Q 018665 129 NLLDEIARIVAKHPRL 144 (352)
Q Consensus 129 ~~l~~l~~~~~~~~~~ 144 (352)
..+.++++++++. ++
T Consensus 409 ~~~~~~~~~~~~~-g~ 423 (562)
T 3bk2_A 409 RHQMNFKWLAESM-SR 423 (562)
T ss_dssp HHHHHHHHHHHTS-SS
T ss_pred HHHHHHHHHHHHc-CC
Confidence 2367777888776 64
No 392
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=27.18 E-value=1.1e+02 Score=25.43 Aligned_cols=63 Identities=11% Similarity=0.189 Sum_probs=36.1
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..++..|.++...... .+..-..+.++..+..++..|++..... +......+.+++. ++++|.
T Consensus 27 ~~a~~~g~~~~~~~~~--~~~~~~~~~i~~~~~~~vdgiIi~~~~~--------~~~~~~~~~~~~~-giPvV~ 89 (330)
T 3uug_A 27 KQLQEAGYKTDLQYAD--DDIPNQLSQIENMVTKGVKVLVIASIDG--------TTLSDVLKQAGEQ-GIKVIA 89 (330)
T ss_dssp HHHHHTTCEEEEEECT--TCHHHHHHHHHHHHHHTCSEEEECCSSG--------GGGHHHHHHHHHT-TCEEEE
T ss_pred HHHHHcCCEEEEeeCC--CCHHHHHHHHHHHHHcCCCEEEEEcCCc--------hhHHHHHHHHHHC-CCCEEE
Confidence 4566789998877643 2111122345555566888888754332 1144555666677 887663
No 393
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=27.17 E-value=84 Score=22.14 Aligned_cols=52 Identities=17% Similarity=0.171 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHccCEEe---ccCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHhh
Q 018665 293 NSESLCRYLLDKAQVAL---VPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 345 (352)
Q Consensus 293 ~~~~~~~~l~~~~gi~i---~~g~~~~~~~~iRi~~~~~~~~l~~~~~~l~~~~~~ 345 (352)
..+++.+.|.+. |+.. ..-++|+..+..++-+..+++++++.++.|.+..+.
T Consensus 17 kld~V~~AL~~~-G~~~t~v~~~gGf~r~g~~~leivV~De~Vd~vi~~I~~~a~T 71 (114)
T 3m05_A 17 DANYLSDQFIDQ-NVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKASHT 71 (114)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHC-CCCEEEEEEeccccccCCEEEEEEEcHHHHHHHHHHHHHHcCC
Confidence 577888888875 5542 222345555678888888889999999999998754
No 394
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=27.10 E-value=2.5e+02 Score=22.66 Aligned_cols=99 Identities=17% Similarity=0.067 Sum_probs=56.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEE-e--cCC------C-----CCChHHHHHhcCCeEEEecccCCCCcccCHHHHH
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVI-I--PAP------F-----WVSYPEMARIADATPVILPTRISENFLLDPKVLE 103 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl-~--~~~------~-----~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~ 103 (352)
-+++.+||-.+...+..+. +.|-.|. + ..+ . .......++..|++...+++.... .-..+.+.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHHHHHH
Confidence 3566788888777666554 3344443 2 111 1 112345777889998888876321 12356666
Q ss_pred hhccC-CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 104 SKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 104 ~~l~~-~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
++++. +...++ +|-+.+......+-+.|.+. |+..+
T Consensus 84 ~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~-gl~~~ 120 (237)
T 3rjz_A 84 RVLSGLKIQGIV-------AGALASKYQRKRIEKVAKEL-GLEVY 120 (237)
T ss_dssp HHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHT-TCEEE
T ss_pred HHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHc-CCEEE
Confidence 66654 445555 57776666677788888888 87666
No 395
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=27.02 E-value=2.5e+02 Score=22.95 Aligned_cols=66 Identities=11% Similarity=0.129 Sum_probs=34.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh----cCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~----~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
...+++|.++...=..+...|.+.|.+|++.+-.-.......+. .+.++..+..+. -|.+.+++.+
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~ 95 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTV 95 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHH
Confidence 34566665554444556667777787777654322222222221 155666666542 2455555544
No 396
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=26.94 E-value=1e+02 Score=24.52 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=27.0
Q ss_pred CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 108 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 108 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
-.+..+++.-. |..|...+ ..++.+++++| |+.+|.
T Consensus 166 l~Pa~vicEi~-~~dG~mar---~~~l~~fA~~h-~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELT-NDDGTMAR---APECIEFANKH-NMALVT 201 (217)
T ss_dssp SCSCEEEEEBB-CTTSSBCC---HHHHHHHHHHT-TCEEEE
T ss_pred CCceEEEEEEe-CCCCCccC---HHHHHHHHHHc-CCCEEE
Confidence 35666665444 66788888 88888889999 998874
No 397
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=26.87 E-value=2.5e+02 Score=22.68 Aligned_cols=97 Identities=13% Similarity=0.120 Sum_probs=48.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEec-CCCCCC---hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc---
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLT--- 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~-~~~~~~---~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~--- 107 (352)
....+++|.+++..=..+...|.+.|.+|++. ...-.. ....++..+.++..+..+. -|.+.+++.++
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADV-----SDPAAVRRLFATAE 100 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34556666655544455666777778887764 222211 1223345677777776653 24555555543
Q ss_pred ---CCeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 108 ---EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 108 ---~~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
.+...+|.+.-..+.+ .-.+.+++++..+
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1444444333222222 2245555555544
No 398
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=26.85 E-value=1.1e+02 Score=26.10 Aligned_cols=26 Identities=19% Similarity=0.244 Sum_probs=19.6
Q ss_pred HHHHHHHHHhCCCEEEEecccccccc
Q 018665 131 LDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 131 l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
.+.|..+-+++|++.+|.|-+-..+.
T Consensus 113 ~rair~iK~~~pdl~VitDvcLc~YT 138 (342)
T 1h7n_A 113 IQGIKFIREYFPELYIICDVCLCEYT 138 (342)
T ss_dssp HHHHHHHHHHCTTSEEEEEECSTTTB
T ss_pred HHHHHHHHHHCCCeEEEEeeeccccc
Confidence 55666666677999999999877644
No 399
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=26.75 E-value=1.1e+02 Score=27.64 Aligned_cols=24 Identities=4% Similarity=0.140 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 127 PKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 127 ~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
..+.++++++.|.++ |+.+|+|-.
T Consensus 70 ~l~~ld~vv~~a~~~-Gl~VIlDlH 93 (464)
T 1wky_A 70 DIQTVRNLISLAEDN-NLVAVLEVH 93 (464)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHHHHHHHC-CCEEEEEec
Confidence 356688888888888 888888753
No 400
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=26.52 E-value=2.1e+02 Score=22.60 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=36.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH----hcCCeEEEecccCCCCcccCHHHHHhhcc------
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLT------ 107 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~----~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------ 107 (352)
.+++|.++...=..+...|.+.|.+|++..-.-.......+ ..+.++..+..+. -|.+.+++.++
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIAATMEQF 78 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 45566554443355566677777777765432222222222 2244555565442 25566655553
Q ss_pred CCeeEEEEcC
Q 018665 108 EKSRLLILCS 117 (352)
Q Consensus 108 ~~~~~i~i~~ 117 (352)
.+...++.+.
T Consensus 79 ~~id~li~~A 88 (250)
T 2cfc_A 79 GAIDVLVNNA 88 (250)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 1455555433
No 401
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=26.43 E-value=2.4e+02 Score=22.30 Aligned_cols=96 Identities=6% Similarity=0.084 Sum_probs=45.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCC-CCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhccC---
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 108 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~-~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--- 108 (352)
...+++|.++...=..+...|.+.|.+|++..- .-.... ..++..+.++..+..+. -|.+.+++.++.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADV-----ANAEDVTNMVKQTVD 78 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 344555555444335556667777877776532 211111 22233466666666542 255566555531
Q ss_pred ---CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 109 ---KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 109 ---~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
+...+|.+.-..+.+. -.+.+++++..+
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4555553332222221 235455555443
No 402
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=26.41 E-value=2.6e+02 Score=22.59 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=47.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccC--CeeEE
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLL 113 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~--~~~~i 113 (352)
...+++|.+++.-=..+...|.+.|-+|++.+-.-.... +..+.++..+..+- -|.+.+++.+++ +.. +
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~---~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iD-i 81 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH---APRHPRIRREELDI-----TDSQRLQRLFEALPRLD-V 81 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT---SCCCTTEEEEECCT-----TCHHHHHHHHHHCSCCS-E
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh---hhhcCCeEEEEecC-----CCHHHHHHHHHhcCCCC-E
Confidence 445555555544445566678888888887653322221 22344555555442 245666665542 334 3
Q ss_pred EEcCC-CCCcccCCCHHHHHHHHHH
Q 018665 114 ILCSP-SNPTGSVYPKNLLDEIARI 137 (352)
Q Consensus 114 ~i~~p-~nptG~~~~~~~l~~l~~~ 137 (352)
+++|. -+.....++.++++++.++
T Consensus 82 LVNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 82 LVNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp EEECCCCCCGGGGGSHHHHHHHHHH
T ss_pred EEECCCCCCCcccCCHHHHHHHHHH
Confidence 44444 2222334566666666553
No 403
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=26.38 E-value=92 Score=24.58 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=27.7
Q ss_pred CCeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 108 EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 108 ~~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
-.+..+++.-. -|..|.... ..++.+++++| |+.++.
T Consensus 157 l~Pa~vicEiv~~~~dG~mar---~~~l~~fA~~h-~l~~it 194 (206)
T 3mio_A 157 LQPAGAICEIVSQKDEGSMAH---TDELRVFADEH-GLALIT 194 (206)
T ss_dssp SCSBEEEEEBBCSSSTTSBCC---HHHHHHHHHHH-TCEEEE
T ss_pred CCceEEEEEEeeeCCCCCcCC---HHHHHHHHHHc-CCcEEE
Confidence 35666665552 567798888 88888888999 998874
No 404
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=26.06 E-value=72 Score=26.24 Aligned_cols=65 Identities=15% Similarity=0.137 Sum_probs=34.6
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..++..|.++.........+..-..+.++..+..++..|++....... .....+.+++. ++++|.
T Consensus 27 ~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~--------~~~~~~~~~~~-giPvV~ 91 (297)
T 3rot_A 27 KAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTA--------FSKSLQRANKL-NIPVIA 91 (297)
T ss_dssp HHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSST--------THHHHHHHHHH-TCCEEE
T ss_pred HHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHH--------HHHHHHHHHHC-CCCEEE
Confidence 456678999887764311111112234555556688888775443211 33444555566 776553
No 405
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=26.00 E-value=2.7e+02 Score=23.59 Aligned_cols=104 Identities=10% Similarity=0.069 Sum_probs=55.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC--CEEEecC--CCCCChH--HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPA--PFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~--~~vl~~~--~~~~~~~--~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+....+++|-+.+.....++....+.| -+|++.. |.+.+.. ..+...|+++..++-. ....+.+
T Consensus 119 I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~Ds-------a~~~~m~--- 188 (315)
T 3ecs_A 119 IKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDA-------AVGYIME--- 188 (315)
T ss_dssp CCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGG-------GHHHHGG---
T ss_pred cCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEehh-------HHHHHHH---
Confidence 356678888777776666666654444 3555553 4443332 3455678888888621 2233333
Q ss_pred CCeeEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 108 EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 108 ~~~~~i~i~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
+...+++-.- -...|.+...----.++-+|+.+ ++++++=
T Consensus 189 -~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~-~vP~~V~ 229 (315)
T 3ecs_A 189 -KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQ-NKPFYVV 229 (315)
T ss_dssp -GCSEEEEECSEECTTSCEEEETTHHHHHHHHHHT-TCCEEEE
T ss_pred -hCCEEEECceEEecCCCeeehhhhHHHHHHHHHh-CCCEEEE
Confidence 3344443211 11223222222234566778889 9888763
No 406
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=25.99 E-value=1.7e+02 Score=20.34 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=29.9
Q ss_pred CEEeccCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 306 QVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 306 gi~i~~g~~~~~~~~iRi~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
-+.++|.+ ....+|+-+-. +.+++++.++.+.+.+++..
T Consensus 58 wvlvRpSG---TEP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~ 97 (112)
T 1wjw_A 58 RAFVRPSG---TEDIVRVYAEANSQESADRLAYEVSLLVFQLA 97 (112)
T ss_dssp EEEEECSS---SSSSEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCC---CccEEEEEEEECCHHHHHHHHHHHHHHHHHHH
Confidence 36677753 57789998866 77888998888888887763
No 407
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=25.97 E-value=2.7e+02 Score=22.79 Aligned_cols=66 Identities=14% Similarity=0.139 Sum_probs=37.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC----hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~----~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
...+++|.++...=..+...|.+.|.+|++..-.-.. .....+..+.++..+..+. -|.+.+++.+
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~ 116 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDL-----SDEQHCKDIV 116 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCT-----TSHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHH
Confidence 3456666555544455666777888887765433221 1223445677777776653 2455555544
No 408
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=25.77 E-value=55 Score=29.32 Aligned_cols=29 Identities=7% Similarity=0.164 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
.++++++++.|+++ |+-||+|-|+-+.+.
T Consensus 64 ~~dfk~Lv~~aH~~-Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 64 RAQFIDMVNRCSAA-GVDIYVDTLINHMAA 92 (448)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEEEECSEECS
T ss_pred HHHHHHHHHHHHHC-CCEEEEEEeeccccC
Confidence 67899999999999 999999999876543
No 409
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=25.75 E-value=2.5e+02 Score=22.33 Aligned_cols=65 Identities=14% Similarity=0.034 Sum_probs=33.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
.+++|.++...=..+...|.+.|.+|++..-.-..... .++..+.++..+..+. -|.+.+++.++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 71 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV-----SDRDQVFAAVE 71 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHH
Confidence 35555554443355666677778777765432111111 2233465666666542 24555555553
No 410
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=25.58 E-value=2.6e+02 Score=23.83 Aligned_cols=71 Identities=11% Similarity=-0.051 Sum_probs=43.8
Q ss_pred cCCCCEEEecCCCCCCh----------HHHHHhcCCeEEEecccCCCC--cc----cCHHHHHhhcc-CCeeEEEEcCCC
Q 018665 57 CSPGDEVIIPAPFWVSY----------PEMARIADATPVILPTRISEN--FL----LDPKVLESKLT-EKSRLLILCSPS 119 (352)
Q Consensus 57 ~~~~~~vl~~~~~~~~~----------~~~~~~~g~~v~~i~~~~~~~--~~----~d~~~l~~~l~-~~~~~i~i~~p~ 119 (352)
+++||+|-+..|..... ...++.+|.+|+.-+.-.... +. .-.++|.+++. +++++|++.--.
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 89 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGG 89 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 56788888888876431 134567899988766433221 11 12455666664 577888776666
Q ss_pred CCcccCCC
Q 018665 120 NPTGSVYP 127 (352)
Q Consensus 120 nptG~~~~ 127 (352)
+-+-.++|
T Consensus 90 ~g~~rlL~ 97 (336)
T 3sr3_A 90 MNSNSLLP 97 (336)
T ss_dssp SCGGGGGG
T ss_pred ccHHHHhh
Confidence 65556655
No 411
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=25.50 E-value=2.3e+02 Score=24.41 Aligned_cols=72 Identities=7% Similarity=-0.013 Sum_probs=47.0
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.|..+...+....++++.+..+.. .-.+...++++.+ +-|++.-|-. .+.++.++|.++|+++ |+.+.+
T Consensus 71 ~~~~~~~ll~~~~iD~V~i~tp~~----~h~~~~~~al~~G-k~V~~EKP~a-----~~~~~~~~l~~~a~~~-~~~~~v 139 (383)
T 3oqb_A 71 WTTDLDAALADKNDTMFFDAATTQ----ARPGLLTQAINAG-KHVYCEKPIA-----TNFEEALEVVKLANSK-GVKHGT 139 (383)
T ss_dssp EESCHHHHHHCSSCCEEEECSCSS----SSHHHHHHHHTTT-CEEEECSCSC-----SSHHHHHHHHHHHHHT-TCCEEE
T ss_pred ccCCHHHHhcCCCCCEEEECCCch----HHHHHHHHHHHCC-CeEEEcCCCC-----CCHHHHHHHHHHHHHc-CCeEEE
Confidence 456777777777777777766532 2455556666544 3355555543 3467789999999998 887776
Q ss_pred ccc
Q 018665 149 DEI 151 (352)
Q Consensus 149 D~~ 151 (352)
-..
T Consensus 140 ~~~ 142 (383)
T 3oqb_A 140 VQD 142 (383)
T ss_dssp CCG
T ss_pred Eec
Confidence 544
No 412
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=25.44 E-value=90 Score=25.45 Aligned_cols=62 Identities=6% Similarity=0.082 Sum_probs=34.2
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
..++..|.++..+... .+..-..+.++..+..++..+++....... ..++.+.+.+. ++++|
T Consensus 32 ~~a~~~g~~~~~~~~~--~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~--------~~~~~~~~~~~-~iPvV 93 (293)
T 3l6u_A 32 AEAKANKYEALVATSQ--NSRISEREQILEFVHLKVDAIFITTLDDVY--------IGSAIEEAKKA-GIPVF 93 (293)
T ss_dssp HHHHHTTCEEEEEECS--SCHHHHHHHHHHHHHTTCSEEEEECSCTTT--------THHHHHHHHHT-TCCEE
T ss_pred HHHHHcCCEEEEECCC--CCHHHHHHHHHHHHHcCCCEEEEecCChHH--------HHHHHHHHHHc-CCCEE
Confidence 4566789998887654 211112234455556678888775433211 33444555566 77655
No 413
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=25.41 E-value=2.7e+02 Score=25.44 Aligned_cols=98 Identities=12% Similarity=0.198 Sum_probs=50.0
Q ss_pred CCCCcEEEeCChHHHHH-HHHHHhcCCCCE-EEec-CCC----------------CCChHHHHHhcCCeEEEecccCCCC
Q 018665 34 YTPDQILVSNGAKQSIL-QAVLAVCSPGDE-VIIP-APF----------------WVSYPEMARIADATPVILPTRISEN 94 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~-~~~~~l~~~~~~-vl~~-~~~----------------~~~~~~~~~~~g~~v~~i~~~~~~~ 94 (352)
..++.+++..|++.+|- .+...|.+.|.+ |++. .-. -......++..|.++..+..+-
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv--- 324 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDL--- 324 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCT---
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCC---
Confidence 34556666666666664 444556666654 5543 221 1122344556688888887753
Q ss_pred cccCHHHHHhhccC-----CeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 95 FLLDPKVLESKLTE-----KSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 95 ~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
-|.+.+++.++. ....||.+.-....+. ..+.++++++.+
T Consensus 325 --td~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 325 --TDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp --TSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 256666665542 3344443332222222 245555555544
No 414
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=25.27 E-value=2e+02 Score=23.15 Aligned_cols=124 Identities=10% Similarity=0.028 Sum_probs=62.1
Q ss_pred hhHHHHHHHH--hcCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcC--CeEEEecccCCC
Q 018665 19 FVQQFVINLK--ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD--ATPVILPTRISE 93 (352)
Q Consensus 19 ~~~~ia~~~~--~~~~~~~~-~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g--~~v~~i~~~~~~ 93 (352)
|..++|+.+. -..+++++ +.|+-...|++.....+.-.+.+..+|...+..-.....+.+... .++..+..+..
T Consensus 58 ~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~- 136 (233)
T 4df3_A 58 YRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR- 136 (233)
T ss_dssp TTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-
T ss_pred CchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-
Confidence 5577776664 33445666 455555555555554555566777788877776655554444332 24545543211
Q ss_pred CcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 94 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 94 ~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
+++.... ......+|+...++ |. .+...++++....+.- |.++|++.+.+
T Consensus 137 ----~p~~~~~-~~~~vDvVf~d~~~-~~---~~~~~l~~~~r~LKpG-G~lvI~ik~r~ 186 (233)
T 4df3_A 137 ----FPEKYRH-LVEGVDGLYADVAQ-PE---QAAIVVRNARFFLRDG-GYMLMAIKARS 186 (233)
T ss_dssp ----CGGGGTT-TCCCEEEEEECCCC-TT---HHHHHHHHHHHHEEEE-EEEEEEEECCH
T ss_pred ----Ccccccc-ccceEEEEEEeccC-Ch---hHHHHHHHHHHhccCC-CEEEEEEeccc
Confidence 2222221 12234445443332 21 1123355556666655 66777665443
No 415
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=25.25 E-value=1.7e+02 Score=25.06 Aligned_cols=84 Identities=10% Similarity=0.102 Sum_probs=42.8
Q ss_pred CCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHH-Hh---h---cc-CCeeEEEEcCCCCCc------ccC
Q 018665 60 GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVL-ES---K---LT-EKSRLLILCSPSNPT------GSV 125 (352)
Q Consensus 60 ~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l-~~---~---l~-~~~~~i~i~~p~npt------G~~ 125 (352)
+..++..+.....-...++..|.+...+-+-... +.+++ .+ . ++ .++.+||+.+.+.-. |..
T Consensus 58 g~~vlyId~E~s~~~~ra~~lGvd~d~llv~~~~----~~E~~~l~i~~~l~~i~~~~~~lvVIDSI~aL~~~~eieg~~ 133 (333)
T 3io5_A 58 DAVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQ----SLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDAL 133 (333)
T ss_dssp TCEEEEEESSCCCCHHHHHHTTCCGGGEEEEECS----BHHHHHHHHHHHHHTCCTTCCEEEEEECSTTCBCC-------
T ss_pred CceEEEEeccchhhHHHHHHhCCCHHHeEEEcCC----CHHHHHHHHHHHHHHhhccCceEEEEecccccccchhccCcc
Confidence 5667766655544445677788654322221111 33333 11 1 33 467888887765421 110
Q ss_pred --------CC----HHHHHHHHHHHHhCCCEEEEe
Q 018665 126 --------YP----KNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 126 --------~~----~~~l~~l~~~~~~~~~~~liv 148 (352)
.- ...+.+|..+++++ |+.+|+
T Consensus 134 gd~~~gsv~qaR~~s~~LrkL~~~ak~~-~i~vi~ 167 (333)
T 3io5_A 134 NEKVVSDMTRAKTMKSLFRIVTPYFSTK-NIPCIA 167 (333)
T ss_dssp -------CTHHHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHh-CCEEEE
Confidence 00 12355666778888 887653
No 416
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=25.23 E-value=1.1e+02 Score=26.47 Aligned_cols=55 Identities=13% Similarity=0.066 Sum_probs=35.8
Q ss_pred CCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 92 SENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
..+..+|.+.+++.++ .++..++++.- +.-+..++.+|.+++++.+... ++++|+
T Consensus 39 ~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~eEr~~vi~~~~~g-rvpVia 97 (344)
T 2hmc_A 39 RQDRTPDFDALVRKGKELIADGMSAVVYCGS-MGDWPLLTDEQRMEGVERLVKA-GIPVIV 97 (344)
T ss_dssp CTTSSBCHHHHHHHHHHHHHTTCCCEEESSG-GGTGGGSCHHHHHHHHHHHHHT-TCCEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCCEEEeCcc-CcChhhCCHHHHHHHHHHHhCC-CCcEEE
Confidence 3455789888888664 46666664333 2234567888888888875555 677763
No 417
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=25.20 E-value=1.6e+02 Score=25.26 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=38.5
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 37 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
..|+-.++|..+...+..+- +.-.-.|++|...-..-...++.+|.+|+.++.
T Consensus 88 ~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~ 141 (344)
T 3vc3_A 88 TTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDP 141 (344)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred CEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 46777788888887776653 333356777776665666788999999998864
No 418
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=25.11 E-value=1.5e+02 Score=24.16 Aligned_cols=94 Identities=5% Similarity=-0.020 Sum_probs=46.6
Q ss_pred EEEeCChHHHHHHHHHHhcCC-CCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcC
Q 018665 39 ILVSNGAKQSILQAVLAVCSP-GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 117 (352)
Q Consensus 39 i~~~~g~~~a~~~~~~~l~~~-~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~ 117 (352)
|++|.++...=..++..|.+. +.+|.+..-.-... ..+...+.+++..++ .|.+.+.++++ +...|+.+.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~~v~~~~~D~-------~d~~~l~~~~~-~~d~vi~~a 73 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-PDDWRGKVSVRQLDY-------FNQESMVEAFK-GMDTVVFIP 73 (289)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-CGGGBTTBEEEECCT-------TCHHHHHHHTT-TCSEEEECC
T ss_pred EEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-HHhhhCCCEEEEcCC-------CCHHHHHHHHh-CCCEEEEeC
Confidence 556544332223344446554 55554432111000 112234555554443 26788888886 566666544
Q ss_pred CC-CCcccCCCHHHHHHHHHHHHhCCCE
Q 018665 118 PS-NPTGSVYPKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 118 p~-nptG~~~~~~~l~~l~~~~~~~~~~ 144 (352)
.. ++.. ......+.+++.|++. ++
T Consensus 74 ~~~~~~~--~~~~~~~~l~~aa~~~-gv 98 (289)
T 3e48_A 74 SIIHPSF--KRIPEVENLVYAAKQS-GV 98 (289)
T ss_dssp CCCCSHH--HHHHHHHHHHHHHHHT-TC
T ss_pred CCCccch--hhHHHHHHHHHHHHHc-CC
Confidence 32 2211 1124467888889888 75
No 419
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=24.99 E-value=1.5e+02 Score=25.68 Aligned_cols=25 Identities=12% Similarity=0.130 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
.+.++++++.|+++ |+.+|+|-.+.
T Consensus 109 l~~~d~~v~~a~~~-Gi~vild~h~~ 133 (395)
T 2jep_A 109 LNRIQQVVDYAYNE-GLYVIINIHGD 133 (395)
T ss_dssp HHHHHHHHHHHHTT-TCEEEECCCGG
T ss_pred HHHHHHHHHHHHHC-CCEEEEECCCc
Confidence 34689999999999 99999997664
No 420
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=24.80 E-value=1.5e+02 Score=24.49 Aligned_cols=76 Identities=11% Similarity=0.016 Sum_probs=45.8
Q ss_pred CEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc---c-CCeeEEEEcCCCCCcccCCCHHHHHHHHH
Q 018665 61 DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL---T-EKSRLLILCSPSNPTGSVYPKNLLDEIAR 136 (352)
Q Consensus 61 ~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l---~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~ 136 (352)
.+.++. .|..+...++.+|++...+.-. ..+-..++..|.+.+ + .++++|++....+ ..-.+.|.+
T Consensus 163 ~~~~vt--~H~af~Y~~~~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~-------~~~~~~l~~ 232 (282)
T 3mfq_A 163 SRYLVT--PHDAFNYFAASYDFTLYAPQGV-STDSEVANSDMIETVNLIIDHNIKAIFTESTTN-------PERMKKLQE 232 (282)
T ss_dssp GCEEEC--SSSCCHHHHHHTTCEEECSSCS-SSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSC-------THHHHHHHH
T ss_pred CcEEEE--ECchHHHHHHHCCCeEeccccc-CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-------hHHHHHHHH
Confidence 344443 2445667899999998765321 122235666666555 3 4777777543332 334778888
Q ss_pred HHHhCCCEEEE
Q 018665 137 IVAKHPRLLVL 147 (352)
Q Consensus 137 ~~~~~~~~~li 147 (352)
+|++. |+.++
T Consensus 233 ~a~~~-g~~v~ 242 (282)
T 3mfq_A 233 AVKAK-GGQVE 242 (282)
T ss_dssp HHHTT-SCCCE
T ss_pred HHHhc-CCceE
Confidence 88888 87554
No 421
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=24.71 E-value=1.2e+02 Score=26.03 Aligned_cols=71 Identities=8% Similarity=0.061 Sum_probs=41.6
Q ss_pred CCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 70 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 70 ~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
|..+...+....++++.+..+.. ...+...++++.+ +-|++.-|-. .+.++.+++.++|+++ |+.+.+.
T Consensus 54 ~~~~~~ll~~~~~D~V~i~tp~~----~h~~~~~~al~aG-k~Vl~EKP~a-----~~~~e~~~l~~~a~~~-g~~~~v~ 122 (349)
T 3i23_A 54 TADLNELLTDPEIELITICTPAH----THYDLAKQAILAG-KSVIVEKPFC-----DTLEHAEELFALGQEK-GVVVMPY 122 (349)
T ss_dssp ESCTHHHHSCTTCCEEEECSCGG----GHHHHHHHHHHTT-CEEEECSCSC-----SSHHHHHHHHHHHHHT-TCCEEEC
T ss_pred ECCHHHHhcCCCCCEEEEeCCcH----HHHHHHHHHHHcC-CEEEEECCCc-----CCHHHHHHHHHHHHHc-CCeEEEE
Confidence 44555555555566666665432 2334444555433 3445444432 3477788999999998 8888764
Q ss_pred cc
Q 018665 150 EI 151 (352)
Q Consensus 150 ~~ 151 (352)
-.
T Consensus 123 ~~ 124 (349)
T 3i23_A 123 QN 124 (349)
T ss_dssp CG
T ss_pred ec
Confidence 33
No 422
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=24.64 E-value=1.4e+02 Score=25.36 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=35.5
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++..|+.-..+-.+.- +..+.+.+.+..+ -+.-+++.+.|. .||..++.+.+.+| +.++||+.=|=|..
T Consensus 115 A~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn~P~-~tg~~l~~~~~~~L---~a~~pnIvgiKdss 188 (315)
T 3na8_A 115 AESLGAEAVMVLPISY--WKLNEAEVFQHYRAVGEAIGVPVMLYNNPG-TSGIDMSVELILRI---VREVDNVTMVKEST 188 (315)
T ss_dssp HHHTTCSEEEECCCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEECHH-HHSCCCCHHHHHHH---HHHSTTEEEEEECS
T ss_pred HHhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCcEEEEeCcc-hhCcCCCHHHHHHH---HhcCCCEEEEECCC
Confidence 3455665555543321 2245455544332 133445545554 37888885544444 33566877776654
No 423
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=24.61 E-value=2.6e+02 Score=22.10 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=38.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
++...+++|.++...=..+...|.+.|.+|++.+-.-.... ..++..+.++..+..+. -|.+.+++.+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDV-----SDPESAKAMA 77 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHH
Confidence 34455666666555445566677778878777654322222 22334567777776653 2455555544
No 424
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=24.59 E-value=1.3e+02 Score=25.82 Aligned_cols=72 Identities=11% Similarity=0.068 Sum_probs=46.1
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.|..+...+....++++.+..+.. .-.+...++++.+ +-|++.-|-. .+.++.+++.++|+++ |+.+.+
T Consensus 53 ~~~~~~~ll~~~~vD~V~i~tp~~----~H~~~~~~al~aG-khVl~EKPla-----~~~~e~~~l~~~a~~~-g~~~~v 121 (358)
T 3gdo_A 53 VVHELEEITNDPAIELVIVTTPSG----LHYEHTMACIQAG-KHVVMEKPMT-----ATAEEGETLKRAADEK-GVLLSV 121 (358)
T ss_dssp EESSTHHHHTCTTCCEEEECSCTT----THHHHHHHHHHTT-CEEEEESSCC-----SSHHHHHHHHHHHHHH-TCCEEE
T ss_pred eECCHHHHhcCCCCCEEEEcCCcH----HHHHHHHHHHHcC-CeEEEecCCc-----CCHHHHHHHHHHHHHc-CCeEEE
Confidence 455666677666777777776532 2345555555544 4455555532 3477899999999999 988876
Q ss_pred ccc
Q 018665 149 DEI 151 (352)
Q Consensus 149 D~~ 151 (352)
--.
T Consensus 122 ~~~ 124 (358)
T 3gdo_A 122 YHN 124 (358)
T ss_dssp ECG
T ss_pred eee
Confidence 443
No 425
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=24.56 E-value=1.3e+02 Score=24.18 Aligned_cols=14 Identities=14% Similarity=0.078 Sum_probs=7.1
Q ss_pred CCCCEEEecCCCCC
Q 018665 58 SPGDEVIIPAPFWV 71 (352)
Q Consensus 58 ~~~~~vl~~~~~~~ 71 (352)
++|++|+-......
T Consensus 76 kpG~~VldlG~G~G 89 (233)
T 4df3_A 76 KEGDRILYLGIASG 89 (233)
T ss_dssp CTTCEEEEETCTTS
T ss_pred CCCCEEEEecCcCC
Confidence 45555555444443
No 426
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=24.39 E-value=2.9e+02 Score=22.57 Aligned_cols=97 Identities=14% Similarity=0.088 Sum_probs=50.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecC-CCCCC---hHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhccCC
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVS---YPE---MARIADATPVILPTRISENFLLDPKVLESKLTEK 109 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~-~~~~~---~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~ 109 (352)
..|++|.++...=..++..|.+.|.+|.+.. ..... -.. .+...+++++..++ -|.+.+.++++ +
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~d~~~l~~~~~-~ 76 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL-------DDHQRLVDALK-Q 76 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCS-------SCHHHHHHHHT-T
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCC-------CCHHHHHHHHh-C
Confidence 3567765433322345556656565555433 22111 111 12334655544433 26788888886 5
Q ss_pred eeEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCC-EE
Q 018665 110 SRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPR-LL 145 (352)
Q Consensus 110 ~~~i~i~~p~n-ptG~~~~~~~l~~l~~~~~~~~~-~~ 145 (352)
...|+.+.... +...... ...+++.|++. + +-
T Consensus 77 ~d~vi~~a~~~~~~~~~~~---~~~l~~aa~~~-g~v~ 110 (313)
T 1qyd_A 77 VDVVISALAGGVLSHHILE---QLKLVEAIKEA-GNIK 110 (313)
T ss_dssp CSEEEECCCCSSSSTTTTT---HHHHHHHHHHS-CCCS
T ss_pred CCEEEECCccccchhhHHH---HHHHHHHHHhc-CCCc
Confidence 66666544322 2112222 67888889888 7 53
No 427
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=24.14 E-value=1.5e+02 Score=24.93 Aligned_cols=56 Identities=16% Similarity=0.067 Sum_probs=36.9
Q ss_pred CCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC--CCEEEEe
Q 018665 92 SENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH--PRLLVLS 148 (352)
Q Consensus 92 ~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~liv 148 (352)
+.+..+|.+.+++.++ .++..++++.-+ .-+..++.+|.+++.+.+.+. .++++|+
T Consensus 27 ~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-GE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 27 TATAEVDYGKLEENLHKLGTFPFRGFVVQGSN-GEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CTTSCBCHHHHHHHHHHHTTSCCSEEEESSGG-GTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCCEEEECccc-cchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 3455689888887664 466676654332 234667888899999888764 1466664
No 428
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=24.13 E-value=1.4e+02 Score=24.94 Aligned_cols=68 Identities=12% Similarity=0.115 Sum_probs=34.4
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhcc---C--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLT---E--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+..|+.-..+-.+. -+..+.+++.+..+ + +.-+++.+.|. .||..++.+.+.+| ++++||+.=|=|.+
T Consensus 92 ~~~Gadavlv~~P~--y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~-~tg~~l~~~~~~~L---a~~~pnIvgiK~s~ 164 (292)
T 2vc6_A 92 QNAGADGVLIVSPY--YNKPTQEGIYQHFKAIDAASTIPIIVYNIPG-RSAIEIHVETLARI---FEDCPNVKGVXDAT 164 (292)
T ss_dssp HHTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEECHH-HHSCCCCHHHHHHH---HHHCTTEEEEEECS
T ss_pred HHcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEeCcc-ccCcCCCHHHHHHH---HhhCCCEEEEecCC
Confidence 34555544443331 11234455544332 1 33445545554 47888885555444 44466877776654
No 429
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=24.08 E-value=1.1e+02 Score=26.67 Aligned_cols=25 Identities=12% Similarity=0.271 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEeccccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYE 153 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~ 153 (352)
.+.++++++.|+++ |+.+|+|-.+.
T Consensus 100 l~~l~~~v~~a~~~-Gi~vild~H~~ 124 (380)
T 1edg_A 100 MNRVQEVVNYCIDN-KMYVILNTHHD 124 (380)
T ss_dssp HHHHHHHHHHHHTT-TCEEEEECCSC
T ss_pred HHHHHHHHHHHHHC-CCEEEEeCCCc
Confidence 35689999999999 99999997554
No 430
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=24.02 E-value=1.9e+02 Score=24.05 Aligned_cols=48 Identities=13% Similarity=0.039 Sum_probs=34.0
Q ss_pred CCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 93 ENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
.+..+|.+.+++.++ .+...++++.. +.-+..++.+|.+++.+.+.+.
T Consensus 13 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 13 KDNRIDKEKLKIHAENLIRKGIDKLFVNGT-TGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESST-TTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHH
Confidence 455799988888774 46777665433 3334668888999999988765
No 431
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=24.01 E-value=2.3e+02 Score=22.67 Aligned_cols=97 Identities=10% Similarity=0.042 Sum_probs=46.9
Q ss_pred CCCcEEEeCCh-HHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH---h-cCCeEEEecccCCCCcccCHHHHHhhcc--
Q 018665 35 TPDQILVSNGA-KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-ADATPVILPTRISENFLLDPKVLESKLT-- 107 (352)
Q Consensus 35 ~~~~i~~~~g~-~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~---~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~-- 107 (352)
+...+++|.++ +..=..+...|.+.|.+|++.+-.-.......+ . .+.++..+..+.. |.+.+++.++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT-----STEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC-----CHHHHHHHHHHH
Confidence 44556666653 333344556677778787776433322222222 2 2346666665432 4555555443
Q ss_pred ----CCeeEEEEcCCCCCccc--CCCHHHHHHHHH
Q 018665 108 ----EKSRLLILCSPSNPTGS--VYPKNLLDEIAR 136 (352)
Q Consensus 108 ----~~~~~i~i~~p~nptG~--~~~~~~l~~l~~ 136 (352)
.+...+|.+.-..+.+. ..+.+++++..+
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLN 130 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 14455554333222222 245555555444
No 432
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=23.95 E-value=2.9e+02 Score=22.32 Aligned_cols=68 Identities=15% Similarity=0.019 Sum_probs=36.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
++...+++|.++...=..+...|.+.|.+|++..-.-..... .++..+.++..+..+. -|.+.+++.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 89 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-----LSRTERDKLM 89 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 344566666665544455666777778777765432211222 2233466666666542 2455555544
No 433
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=23.94 E-value=2e+02 Score=23.94 Aligned_cols=48 Identities=8% Similarity=0.009 Sum_probs=34.0
Q ss_pred CCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 93 ENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
.+..+|.+.+++.++ .+...++++.-+ .-+..++.+|.+++.+.+.+.
T Consensus 17 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 17 TDGTVDIDAMIAHARRCLSNGCDSVTLFGTT-GEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEESSTT-TTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHH
Confidence 455799998888764 467776654433 334668888999999988764
No 434
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=23.66 E-value=1.6e+02 Score=24.57 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=35.4
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+..|+.-..+-.+.- +..+.+.+.+..+ -+.-+++.+.|.. ||..++.+.+.+|+ ++||+.=|=|.+
T Consensus 92 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-tg~~l~~~~~~~La----~~pnIvgiKds~ 163 (297)
T 2rfg_A 92 QQAGADAVLCVAGYY--NRPSQEGLYQHFKMVHDAIDIPIIVYNIPPR-AVVDIKPETMARLA----ALPRIVGVKDAT 163 (297)
T ss_dssp HHHTCSEEEECCCTT--TCCCHHHHHHHHHHHHHHCSSCEEEEECHHH-HSCCCCHHHHHHHH----TSTTEEEEEECS
T ss_pred HhcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-cCCCCCHHHHHHHH----cCCCEEEEEeCC
Confidence 345665554443321 2235455554332 1344555565643 78889965555554 355777776654
No 435
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=23.60 E-value=75 Score=24.43 Aligned_cols=104 Identities=12% Similarity=0.044 Sum_probs=57.2
Q ss_pred CcEEEeC--ChHHHHHHHHHHhcCC--CCEEEecCCCCCChHHHHHh-cCCeEEEecccCCCCcccCHHHHHhhccCCee
Q 018665 37 DQILVSN--GAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTEKSR 111 (352)
Q Consensus 37 ~~i~~~~--g~~~a~~~~~~~l~~~--~~~vl~~~~~~~~~~~~~~~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~ 111 (352)
..|+++. .--..+..+.+.+.+- |=+++.+. ++...++. .|+++..+.--.+++ + .++.+.++.+-.
T Consensus 28 g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~AT~----gTa~~L~e~~Gl~v~~v~k~~eGG---~-pqI~d~I~~geI 99 (178)
T 1vmd_A 28 KRIALIAHDRRKRDLLEWVSFNLGTLSKHELYATG----TTGALLQEKLGLKVHRLKSGPLGG---D-QQIGAMIAEGKI 99 (178)
T ss_dssp CEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEECH----HHHHHHHHHHCCCCEECSCGGGTH---H-HHHHHHHHTTSC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEEch----HHHHHHHHHhCceeEEEeecCCCC---C-chHHHHHHCCCc
Confidence 4566552 2333444444444333 44555443 34456666 898888885322222 3 356666765444
Q ss_pred EEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCEEEEeccc
Q 018665 112 LLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 112 ~i~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
-+++..|. |.| ..+ ..+...|.+.|..+ |++++.--+
T Consensus 100 dlVInt~d-Pl~-~~~h~~D~~~IRR~A~~~-~IP~~Tnla 137 (178)
T 1vmd_A 100 DVLIFFWD-PLE-PQAHDVDVKALIRIATVY-NIPVAITRS 137 (178)
T ss_dssp CEEEEECC-SSS-CCTTSCCHHHHHHHHHHT-TCCEESSHH
T ss_pred cEEEEccC-ccC-CCcccccHHHHHHHHHHc-CCCEEeCHH
Confidence 44444443 222 122 23389999999999 999985543
No 436
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=23.52 E-value=2.8e+02 Score=22.14 Aligned_cols=69 Identities=9% Similarity=0.160 Sum_probs=38.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEec-CCCCCChH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~-~~~~~~~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
++...+++|.+++..=..+...|.+.|.+|++. ...-.... ..++..+.++..+..+- -|.+.+++.++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 78 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADL-----TNAAEVEAAIS 78 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCT-----TCHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHH
Confidence 344566666665554456667777888888775 43332222 23344566666666542 25555555553
No 437
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=23.51 E-value=1.3e+02 Score=21.42 Aligned_cols=39 Identities=13% Similarity=0.228 Sum_probs=28.3
Q ss_pred HHHHHHccCEEeccCCCCCCCCeEEEEeec--CHHHHHHHHHH
Q 018665 298 CRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVER 338 (352)
Q Consensus 298 ~~~l~~~~gi~i~~g~~~~~~~~iRi~~~~--~~~~l~~~~~~ 338 (352)
+..|.++.| +.||..++...|+.|.+.. ++++|.++++.
T Consensus 71 ~~~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~~ 111 (125)
T 2kfp_A 71 VGSLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIED 111 (125)
T ss_dssp HHHHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHHH
Confidence 345555567 5688888888999998864 77887777654
No 438
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=23.45 E-value=2e+02 Score=23.97 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=35.6
Q ss_pred HHHhcCCeEEEecccCCCCcccCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 76 MARIADATPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
.++..|+.-..+-.+.- +..+.+.+.+..+ -+.-+++.+.|. .||..++.+.+. +++ ++||+.=|=|.
T Consensus 97 ~a~~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn~P~-~tg~~l~~~~~~---~La-~~pnivgiKds 169 (297)
T 3flu_A 97 AAEKAGADYTLSVVPYY--NKPSQEGIYQHFKTIAEATSIPMIIYNVPG-RTVVSMTNDTIL---RLA-EIPNIVGVKEA 169 (297)
T ss_dssp HHHHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEECHH-HHSSCCCHHHHH---HHT-TSTTEEEEEEC
T ss_pred HHHHcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEECCc-hhccCCCHHHHH---HHH-cCCCEEEEEeC
Confidence 33456666555543321 2245455544332 133445555554 368888855444 444 45677777665
Q ss_pred c
Q 018665 151 I 151 (352)
Q Consensus 151 ~ 151 (352)
+
T Consensus 170 s 170 (297)
T 3flu_A 170 S 170 (297)
T ss_dssp S
T ss_pred C
Confidence 3
No 439
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=23.44 E-value=68 Score=28.62 Aligned_cols=28 Identities=14% Similarity=0.102 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
.++++++++.|+++ |+-||+|-+.-+.+
T Consensus 69 ~~df~~lv~~aH~~-Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 69 EREFKEMIEAFHDS-GIKVVLDLPIHHTG 96 (441)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEEECTTBCC
T ss_pred HHHHHHHHHHHHHC-CCEEEEEeCCCccc
Confidence 67899999999999 99999999976543
No 440
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=23.43 E-value=3.4e+02 Score=23.04 Aligned_cols=67 Identities=9% Similarity=0.114 Sum_probs=38.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC----------hHHHHHhcCCeEEEecccCCCCcccCHHHHHhh
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----------YPEMARIADATPVILPTRISENFLLDPKVLESK 105 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~----------~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~ 105 (352)
...+++|.++...=..+...|.+.|.+|++..-.-.. ....++..|.++..+..+-. |.+.+++.
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~ 119 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR-----DEQQISAA 119 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHHH
Confidence 3456666555444455666777888777765432221 23444566778887776532 55555555
Q ss_pred cc
Q 018665 106 LT 107 (352)
Q Consensus 106 l~ 107 (352)
++
T Consensus 120 ~~ 121 (346)
T 3kvo_A 120 VE 121 (346)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 441
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=23.42 E-value=80 Score=29.22 Aligned_cols=49 Identities=12% Similarity=0.112 Sum_probs=33.4
Q ss_pred HHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEecc
Q 018665 99 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 150 (352)
Q Consensus 99 ~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~ 150 (352)
.+.++++++.....|-+=..+.+.... .+..+++.++|++| ++.+|+++
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~l~~l~~~~-~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFF--IEEALQIKELCHAH-NVPLIIND 76 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHH--HHHHHHHHHHHHHT-TCCEEECS
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHH--HHHHHHHHHHHHhc-CCEEEEeC
Confidence 366777777677777665554433222 34577888999999 99888865
No 442
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=23.34 E-value=1.3e+02 Score=22.25 Aligned_cols=58 Identities=21% Similarity=0.261 Sum_probs=36.9
Q ss_pred ccCHHHHHhhccC-CeeEEEEcCCCCCcccCCCHH-HHHHHHH-HHHhCCCE-EEEecccccc
Q 018665 96 LLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKN-LLDEIAR-IVAKHPRL-LVLSDEIYEH 154 (352)
Q Consensus 96 ~~d~~~l~~~l~~-~~~~i~i~~p~nptG~~~~~~-~l~~l~~-~~~~~~~~-~livD~~~~~ 154 (352)
..+.+.|.+.+++ ++..+++--|-|..|..-+.- ..+..++ ++++. ++ +.++||.++.
T Consensus 41 ~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~-~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 41 DYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTY-NVPVVLWDERLTT 102 (150)
T ss_dssp BCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHH-CSCEEEECCSSCH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhh-CCCEEEecCCCCH
Confidence 4578889998875 788899998976666553322 2345553 33445 54 4566887653
No 443
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=23.21 E-value=2.2e+02 Score=20.64 Aligned_cols=97 Identities=11% Similarity=0.008 Sum_probs=48.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH-hcCCeEEEecccCCCCcccCHHHHHhhccCCeeE
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTEKSRL 112 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~-~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~ 112 (352)
.....|++...|.-+... ...|.+.|.+|.+.+..-... ..++ ..|..+...+. .+.+.+.+.--.+..+
T Consensus 17 ~~~~~v~IiG~G~iG~~l-a~~L~~~g~~V~vid~~~~~~-~~~~~~~g~~~~~~d~-------~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLI-ANLASSSGHSVVVVDKNEYAF-HRLNSEFSGFTVVGDA-------AEFETLKECGMEKADM 87 (155)
T ss_dssp CCCCEEEEECCSHHHHHH-HHHHHHTTCEEEEEESCGGGG-GGSCTTCCSEEEESCT-------TSHHHHHTTTGGGCSE
T ss_pred cCCCcEEEECCCHHHHHH-HHHHHhCCCeEEEEECCHHHH-HHHHhcCCCcEEEecC-------CCHHHHHHcCcccCCE
Confidence 345677777666666553 334444555666665433222 2233 44554432221 2455665541235667
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHh-CCCEEEE
Q 018665 113 LILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVL 147 (352)
Q Consensus 113 i~i~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~li 147 (352)
++++.++ .+....+..++++ .+...++
T Consensus 88 Vi~~~~~--------~~~~~~~~~~~~~~~~~~~iv 115 (155)
T 2g1u_A 88 VFAFTND--------DSTNFFISMNARYMFNVENVI 115 (155)
T ss_dssp EEECSSC--------HHHHHHHHHHHHHTSCCSEEE
T ss_pred EEEEeCC--------cHHHHHHHHHHHHHCCCCeEE
Confidence 7766553 2335566666766 5233344
No 444
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=23.21 E-value=2.9e+02 Score=22.03 Aligned_cols=64 Identities=16% Similarity=0.157 Sum_probs=32.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC--hHH---HHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 38 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPE---MARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 38 ~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~--~~~---~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
.+++|.++...=..+...|.+.|.+|++..-.-.. ... .++..+.++..+..+- -|.+.+++.+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~ 72 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV-----TDKANFDSAI 72 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHH
Confidence 35555554443355566677777777765432222 222 2223366666666542 2455555544
No 445
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=23.18 E-value=2.5e+02 Score=27.67 Aligned_cols=111 Identities=10% Similarity=0.080 Sum_probs=61.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc---CCCC--E----EEecCCCCC-------------C------hHHHHHhcCCeEEE
Q 018665 35 TPDQILVSNGAKQSILQAVLAVC---SPGD--E----VIIPAPFWV-------------S------YPEMARIADATPVI 86 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~---~~~~--~----vl~~~~~~~-------------~------~~~~~~~~g~~v~~ 86 (352)
..+.|.++.++..++...+.+|. ..++ . .+...|.|. + +.+.+...+.++.-
T Consensus 267 ~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN~lh 346 (858)
T 1c7s_A 267 GKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKFH 346 (858)
T ss_dssp CSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCcEEE
Confidence 45568888777777777777752 2221 1 122234332 1 23445566777777
Q ss_pred ecccCCCCcccCHHHHHhhccCCe-e--------EEEEcCC-C--CCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 87 LPTRISENFLLDPKVLESKLTEKS-R--------LLILCSP-S--NPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 87 i~~~~~~~~~~d~~~l~~~l~~~~-~--------~i~i~~p-~--nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+.+.++.+|.+....+-++-.... + .+ .... + .+.|..++.+++++|.+.|+++ ++-||
T Consensus 347 ~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~-~p~~g~~~~~~~g~YT~~direIv~YA~~r-gI~VI 417 (858)
T 1c7s_A 347 FHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCL-LPQYGQGPDVYGGFFSRQDYIDIIKYAQAR-QIEVI 417 (858)
T ss_dssp EECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSB-CCCTTCCSSCEECCBCHHHHHHHHHHHHTT-TCEEE
T ss_pred EEeccCccccccccCCchhhhccccccccccccccc-cccccCCCCccCCCCCHHHHHHHHHHHHHc-CCEEE
Confidence 777655556554333221110000 0 00 0000 1 1346789999999999999999 99877
No 446
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=23.18 E-value=73 Score=27.13 Aligned_cols=73 Identities=10% Similarity=0.058 Sum_probs=49.4
Q ss_pred CCCChHHHHHh-cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 69 FWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 69 ~~~~~~~~~~~-~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
.|..+...+.. ..++++.+..+.. .-.+...++++.+ +-|++.-|-. .+.++.+++.++|+++ |+.+.
T Consensus 68 ~~~~~~~ll~~~~~vD~V~i~tp~~----~H~~~~~~al~aG-khVl~EKP~a-----~~~~e~~~l~~~a~~~-g~~~~ 136 (330)
T 4ew6_A 68 SYTTIEAMLDAEPSIDAVSLCMPPQ----YRYEAAYKALVAG-KHVFLEKPPG-----ATLSEVADLEALANKQ-GASLF 136 (330)
T ss_dssp EESSHHHHHHHCTTCCEEEECSCHH----HHHHHHHHHHHTT-CEEEECSSSC-----SSHHHHHHHHHHHHHH-TCCEE
T ss_pred ccCCHHHHHhCCCCCCEEEEeCCcH----HHHHHHHHHHHcC-CcEEEeCCCC-----CCHHHHHHHHHHHHhc-CCeEE
Confidence 46677778777 7788888876532 2345555556544 5556666543 3477899999999999 99887
Q ss_pred ecccc
Q 018665 148 SDEIY 152 (352)
Q Consensus 148 vD~~~ 152 (352)
+-..+
T Consensus 137 v~~~~ 141 (330)
T 4ew6_A 137 ASWHS 141 (330)
T ss_dssp ECCGG
T ss_pred EEehh
Confidence 65443
No 447
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=23.16 E-value=3.1e+02 Score=22.97 Aligned_cols=112 Identities=6% Similarity=-0.040 Sum_probs=55.3
Q ss_pred HHHHHHHHhcCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH----hc----CCeEEEecccCC
Q 018665 21 QQFVINLKENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IA----DATPVILPTRIS 92 (352)
Q Consensus 21 ~~ia~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~----~~----g~~v~~i~~~~~ 92 (352)
+.+.+.+. .....|++|.++...=..++..|.+.|.+|.+.+-.-......+. .. +.++..+..+.
T Consensus 17 ~~~~~~~~-----~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl- 90 (352)
T 1sb8_A 17 EELRKELP-----AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI- 90 (352)
T ss_dssp HHHHHHHH-----HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCT-
T ss_pred HhhchhcC-----ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCC-
Confidence 77777665 344567777654443355666676667777655322211111111 11 12333443321
Q ss_pred CCcccCHHHHHhhccCCeeEEEEcCCCCCcccC-CCH--------HHHHHHHHHHHhCCCE
Q 018665 93 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPK--------NLLDEIARIVAKHPRL 144 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~-~~~--------~~l~~l~~~~~~~~~~ 144 (352)
.|.+.+.++++ ++..||.+......+.. -+. .-...+++.|.+. ++
T Consensus 91 ----~d~~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~ 145 (352)
T 1sb8_A 91 ----RNLDDCNNACA-GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KV 145 (352)
T ss_dssp ----TSHHHHHHHHT-TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC
T ss_pred ----CCHHHHHHHhc-CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 25677777776 56666654432211110 011 1135677778776 64
No 448
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=23.13 E-value=44 Score=22.65 Aligned_cols=21 Identities=5% Similarity=-0.020 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhCCCEEEEeccc
Q 018665 130 LLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 130 ~l~~l~~~~~~~~~~~livD~~ 151 (352)
--.+|.++|+++ |++++.|..
T Consensus 28 ~A~~I~e~A~e~-gVPi~e~~~ 48 (93)
T 2vt1_B 28 CALAVRKYANEV-GIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHHT-TCCEEECHH
T ss_pred HHHHHHHHHHHc-CCCEEECHH
Confidence 377899999999 999998864
No 449
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=23.12 E-value=2.1e+02 Score=23.91 Aligned_cols=59 Identities=12% Similarity=0.174 Sum_probs=38.0
Q ss_pred ccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC--CCEEEEe
Q 018665 89 TRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH--PRLLVLS 148 (352)
Q Consensus 89 ~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~liv 148 (352)
.+.+.+..+|.+.+++.++ .+...++++.-+ .-+..++.+|.+++.+.+.+. .++++|+
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 17 TPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTT-GESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccc-cCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3333456789988888764 466776654433 334667888888888887652 1456664
No 450
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=23.04 E-value=1.1e+02 Score=26.96 Aligned_cols=26 Identities=15% Similarity=0.070 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYEH 154 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~~ 154 (352)
.+++++|.++|+++ |.-+++|-....
T Consensus 73 ~~~~~~l~~~a~~~-g~~vi~DVsp~~ 98 (385)
T 1x7f_A 73 VAEFKEIINHAKDN-NMEVILDVAPAV 98 (385)
T ss_dssp -HHHHHHHHHHHHT-TCEEEEEECTTC
T ss_pred HHHHHHHHHHHHHC-CCEEEEECCHHH
Confidence 46799999999999 999999976543
No 451
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=22.99 E-value=1.6e+02 Score=24.63 Aligned_cols=69 Identities=10% Similarity=0.088 Sum_probs=36.2
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhcc---C--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLT---E--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++..|+.-..+-.+.- +..+.+.+.+..+ + +.-+++.+.|. .||..++.+.+.+| ++++||+.=|=|.+
T Consensus 91 A~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn~P~-~tg~~l~~~~~~~L---a~~~pnivgiKds~ 164 (294)
T 2ehh_A 91 AKEVGADGALVVVPYY--NKPTQRGLYEHFKTVAQEVDIPIIIYNIPS-RTCVEISVDTMFKL---ASECENIVASKEST 164 (294)
T ss_dssp HHHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEECHH-HHSCCCCHHHHHHH---HHHCTTEEEEEECC
T ss_pred HHhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEeCCc-ccCcCCCHHHHHHH---HhhCCCEEEEEeCC
Confidence 3456666555443321 2245555554332 1 33445555554 37888885555544 43556776665543
No 452
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=22.98 E-value=1.3e+02 Score=26.10 Aligned_cols=70 Identities=10% Similarity=0.173 Sum_probs=39.3
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.|..+...+....++++.+.++.. .-.+...++++.+ +-|++.-|-. .+.++.++|.++++++ |+.+.+
T Consensus 52 ~~~~~~ell~~~~vD~V~i~tp~~----~H~~~~~~al~aG-k~Vl~EKP~a-----~~~~e~~~l~~~a~~~-g~~~~v 120 (387)
T 3moi_A 52 VFATLAEMMQHVQMDAVYIASPHQ----FHCEHVVQASEQG-LHIIVEKPLT-----LSRDEADRMIEAVERA-GVHLVV 120 (387)
T ss_dssp EESSHHHHHHHSCCSEEEECSCGG----GHHHHHHHHHHTT-CEEEECSCCC-----SCHHHHHHHHHHHHHH-TCCEEE
T ss_pred eECCHHHHHcCCCCCEEEEcCCcH----HHHHHHHHHHHCC-CceeeeCCcc-----CCHHHHHHHHHHHHHh-CCeEEE
Confidence 455666666666666666665532 1234444444433 3445554432 2366677777777777 776664
Q ss_pred c
Q 018665 149 D 149 (352)
Q Consensus 149 D 149 (352)
-
T Consensus 121 ~ 121 (387)
T 3moi_A 121 G 121 (387)
T ss_dssp C
T ss_pred E
Confidence 4
No 453
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=22.97 E-value=69 Score=28.23 Aligned_cols=28 Identities=11% Similarity=0.156 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
.++++++++.|+++ |+-||+|-+..+.+
T Consensus 68 ~~d~~~lv~~~h~~-Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 68 AAELKSLIGALHGK-GVQAIADIVINHRC 95 (405)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHC-CCEEEEEECcCccc
Confidence 67899999999999 99999999977643
No 454
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=22.92 E-value=2.1e+02 Score=24.05 Aligned_cols=62 Identities=16% Similarity=0.107 Sum_probs=39.6
Q ss_pred EecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC--CCEEEEe
Q 018665 86 ILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH--PRLLVLS 148 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~liv 148 (352)
.+..+.+.+..+|.+.+++.++ .+...++++.-+ .-+..++.+|.+++.+.+.+. .++++|+
T Consensus 22 a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~Gtt-GE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 22 AMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTT-GESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp ECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred EEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccc-cchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3444434556799988888774 466776654433 334667888888888887652 1466664
No 455
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.86 E-value=2.3e+02 Score=23.06 Aligned_cols=33 Identities=9% Similarity=0.224 Sum_probs=19.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 67 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~ 67 (352)
....+++|.++...=..+...|.+.|.+|++..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITG 37 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 344556665554433556666777787777654
No 456
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.83 E-value=2.5e+02 Score=23.34 Aligned_cols=102 Identities=21% Similarity=0.253 Sum_probs=51.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH----hcCCeEEEecccCCCCcccCHHHHHhhccC-Cee
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTE-KSR 111 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~----~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-~~~ 111 (352)
..|++|.++...=..+...|.+.|.+|++..-.-.......+ ..+..+..+..+. -|.+.+++.++. ++.
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDV-----SDERALARIFDAHPIT 80 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT-----TCHHHHHHHHHHSCCC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeec-----CCHHHHHHHHhccCCc
Confidence 356666554443355666777778787766533323222222 2244444554331 267788887753 556
Q ss_pred EEEEcCCCCCcccCC--C-------HHHHHHHHHHHHhCCCE
Q 018665 112 LLILCSPSNPTGSVY--P-------KNLLDEIARIVAKHPRL 144 (352)
Q Consensus 112 ~i~i~~p~nptG~~~--~-------~~~l~~l~~~~~~~~~~ 144 (352)
.|+.+......+... + ..-...+++.|++. ++
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~ 121 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AV 121 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 665444332222110 0 11234567777776 53
No 457
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=22.74 E-value=1.9e+02 Score=24.37 Aligned_cols=50 Identities=10% Similarity=0.178 Sum_probs=27.6
Q ss_pred cCHHHHHhhcc---C--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 97 LDPKVLESKLT---E--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 97 ~d~~~l~~~l~---~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
.+.+.+.+..+ + +.-+++.+.|. .||..++.+.+.+|+ + +||+.=|=|..
T Consensus 117 ~s~~~l~~~f~~va~a~~lPiilYn~P~-~tg~~l~~~~~~~La---~-~pnIvgiKdss 171 (311)
T 3h5d_A 117 PSQEGMYQHFKAIADASDLPIIIYNIPG-RVVVELTPETMLRLA---D-HPNIIGVKECT 171 (311)
T ss_dssp CCHHHHHHHHHHHHHSCSSCEEEEECHH-HHSSCCCHHHHHHHH---T-STTEEEEEECS
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeccc-ccCCCCCHHHHHHHh---c-CCCEEEEEeCC
Confidence 34455544332 1 33444545453 278888855555554 3 45887777755
No 458
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=22.71 E-value=69 Score=28.59 Aligned_cols=29 Identities=17% Similarity=0.217 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHhCCCEEEEecccccccc
Q 018665 127 PKNLLDEIARIVAKHPRLLVLSDEIYEHII 156 (352)
Q Consensus 127 ~~~~l~~l~~~~~~~~~~~livD~~~~~~~ 156 (352)
+.++++++++.|+++ |+-||+|-+.-+..
T Consensus 85 t~~df~~lv~~~H~~-Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAY-GIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHC-CCEEEEEECccccc
Confidence 377899999999999 99999999876543
No 459
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=22.67 E-value=1.3e+02 Score=25.51 Aligned_cols=24 Identities=8% Similarity=-0.111 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.+.++++++.|+++ |+.+|+|-.+
T Consensus 76 ~~~ld~~v~~a~~~-Gi~vildlh~ 99 (341)
T 1vjz_A 76 FEKIDRVIFWGEKY-GIHICISLHR 99 (341)
T ss_dssp HHHHHHHHHHHHHH-TCEEEEEEEE
T ss_pred HHHHHHHHHHHHHc-CCEEEEEecC
Confidence 45689999999999 9999999754
No 460
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=22.65 E-value=1.6e+02 Score=24.18 Aligned_cols=96 Identities=14% Similarity=0.022 Sum_probs=48.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEec-CCCCCC----hH---HHHHhcCCeEEEecccCCCCcccCHHHHHhhccC
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVS----YP---EMARIADATPVILPTRISENFLLDPKVLESKLTE 108 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~-~~~~~~----~~---~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~ 108 (352)
..|++|.++...=..++..|.+.|.+|.+. ...-.. -. ..+...|++++..++ -|.+.+.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~-------~d~~~l~~~~~- 76 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI-------DDHASLVEAVK- 76 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCT-------TCHHHHHHHHH-
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEecc-------CCHHHHHHHHc-
Confidence 356666553332344556666666555543 322111 11 122345666554443 26788888776
Q ss_pred CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC-EEEE
Q 018665 109 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVL 147 (352)
Q Consensus 109 ~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~-~~li 147 (352)
+...|+.+..... . .....+++.|++. + +--+
T Consensus 77 ~~d~vi~~a~~~~---~---~~~~~l~~aa~~~-g~v~~~ 109 (308)
T 1qyc_A 77 NVDVVISTVGSLQ---I---ESQVNIIKAIKEV-GTVKRF 109 (308)
T ss_dssp TCSEEEECCCGGG---S---GGGHHHHHHHHHH-CCCSEE
T ss_pred CCCEEEECCcchh---h---hhHHHHHHHHHhc-CCCceE
Confidence 4566654433211 1 1246778888877 6 5333
No 461
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=22.59 E-value=2e+02 Score=23.84 Aligned_cols=26 Identities=15% Similarity=-0.038 Sum_probs=13.7
Q ss_pred EEEeec-CHHHHHHHHHHHHHHHhhhC
Q 018665 322 RISYAA-SLTTLQAAVERIKKGLLTLR 347 (352)
Q Consensus 322 Ri~~~~-~~~~l~~~~~~l~~~~~~~~ 347 (352)
|..+.. ++++.+++.+.+++..++++
T Consensus 259 R~Pl~~l~~~~~~~l~~~l~~~~~~~~ 285 (286)
T 2r91_A 259 RGPVYPLDPEEKAWLRAAVAKAKSQLR 285 (286)
T ss_dssp CTTSCCCCHHHHHHHHHHTHHHHHTCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 444433 55666666555665555443
No 462
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=22.58 E-value=2.5e+02 Score=24.65 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=42.1
Q ss_pred CCCChHHHHHh-----cCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 018665 69 FWVSYPEMARI-----ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 143 (352)
Q Consensus 69 ~~~~~~~~~~~-----~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~ 143 (352)
.|..+...+.. .+++++.+..+.. .-.+...++++.+ +-|++.-|-. .+.++.++|.++++++ +
T Consensus 93 ~~~~~~~ll~~~~~~~~~vD~V~I~tp~~----~H~~~~~~al~aG-khVl~EKPla-----~~~~ea~~l~~~a~~~-g 161 (417)
T 3v5n_A 93 VYSDFKEMAIREAKLKNGIEAVAIVTPNH----VHYAAAKEFLKRG-IHVICDKPLT-----STLADAKKLKKAADES-D 161 (417)
T ss_dssp BCSCHHHHHHHHHHCTTCCSEEEECSCTT----SHHHHHHHHHTTT-CEEEEESSSC-----SSHHHHHHHHHHHHHC-S
T ss_pred ccCCHHHHHhcccccCCCCcEEEECCCcH----HHHHHHHHHHhCC-CeEEEECCCc-----CCHHHHHHHHHHHHHc-C
Confidence 34455555554 4455555555422 1233344444432 3344444432 3577899999999999 9
Q ss_pred EEEEeccccc
Q 018665 144 LLVLSDEIYE 153 (352)
Q Consensus 144 ~~livD~~~~ 153 (352)
+.+.+...+.
T Consensus 162 ~~~~v~~~~R 171 (417)
T 3v5n_A 162 ALFVLTHNYT 171 (417)
T ss_dssp SCEEEECGGG
T ss_pred CEEEEEeccc
Confidence 8888765543
No 463
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=22.58 E-value=2.9e+02 Score=22.23 Aligned_cols=57 Identities=9% Similarity=0.068 Sum_probs=30.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH---h-cCCeEEEecccC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-ADATPVILPTRI 91 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~---~-~g~~v~~i~~~~ 91 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+ . .+.++..+..+-
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv 79 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDL 79 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC
Confidence 34455555554443355666777888887776543222222222 1 466777776653
No 464
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.56 E-value=2.4e+02 Score=21.72 Aligned_cols=71 Identities=8% Similarity=-0.040 Sum_probs=38.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEc
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 116 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~ 116 (352)
..|++|.++...=..++..|.+.|.+|.+..-.-... ......+..+..+. .|.+.+++.++ ++..|+.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~Dl-----~d~~~~~~~~~-~~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI----KIENEHLKVKKADV-----SSLDEVCEVCK-GADAVISA 74 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC----CCCCTTEEEECCCT-----TCHHHHHHHHT-TCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc----hhccCceEEEEecC-----CCHHHHHHHhc-CCCEEEEe
Confidence 3577776554444566777777777777654321111 11113344444321 36788888876 56666654
Q ss_pred C
Q 018665 117 S 117 (352)
Q Consensus 117 ~ 117 (352)
.
T Consensus 75 a 75 (227)
T 3dhn_A 75 F 75 (227)
T ss_dssp C
T ss_pred C
Confidence 3
No 465
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=22.56 E-value=1.8e+02 Score=24.88 Aligned_cols=68 Identities=19% Similarity=0.209 Sum_probs=37.6
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhcc---C--CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLT---E--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---~--~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++..|+.-..+-.+.- +..+.+.+.+..+ + +.-+++.+.|.. ||..++.+.+.+|+ ++||+.=|=|..
T Consensus 125 A~~~Gadavlv~~P~Y--~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~-tg~~l~~e~~~~La----~~pnIvgiKdss 197 (332)
T 2r8w_A 125 AEAAGADALLLAPVSY--TPLTQEEAYHHFAAVAGATALPLAIYNNPTT-TRFTFSDELLVRLA----YIPNIRAIKMPL 197 (332)
T ss_dssp HHHHTCSEEEECCCCS--SCCCHHHHHHHHHHHHHHCSSCEEEECCHHH-HCCCCCHHHHHHHH----TSTTEEEEEECC
T ss_pred HHhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-cCcCCCHHHHHHHH----cCCCEEEEEeCC
Confidence 3456776655544421 2345555554442 1 334455455543 88999966555554 356877776655
No 466
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=22.52 E-value=90 Score=28.61 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=57.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-----C-CC-----EEEecCCCCC-------------C------hHHHHHhcCCeEE
Q 018665 36 PDQILVSNGAKQSILQAVLAVCS-----P-GD-----EVIIPAPFWV-------------S------YPEMARIADATPV 85 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~-----~-~~-----~vl~~~~~~~-------------~------~~~~~~~~g~~v~ 85 (352)
++.|.++.++..++...+.+|.+ . +. ..+...|.|. + +.+.+...+.++.
T Consensus 100 ~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~KlN~l 179 (507)
T 2gjx_A 100 DDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVF 179 (507)
T ss_dssp SSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred CCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCCceE
Confidence 34577777777777777777531 1 11 1122223331 1 2234445667766
Q ss_pred EecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 86 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
-+.+.++.+|.+..+.+-+.-.. ....|.+..++.+++++|.+.|+++ ++-||
T Consensus 180 h~HltDdq~wr~ei~~~P~Lt~~--------Ga~~~~~~~YT~~di~eiv~yA~~r-gI~VI 232 (507)
T 2gjx_A 180 HWHLVDDPSFPYESFTFPELMRK--------GSYNPVTHIYTAQDVKEVIEYARLR-GIRVL 232 (507)
T ss_dssp EEECCCSSCCCBCCSSCTHHHHH--------HSSCTTTSCBCHHHHHHHHHHHHHT-TCEEE
T ss_pred EEEEecccCeeeeccccchhhhc--------cccCCCCCCcCHHHHHHHHHHHHHc-CCEEE
Confidence 66665544554432211111000 0012335678999999999999999 99888
No 467
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=22.51 E-value=1.8e+02 Score=19.44 Aligned_cols=91 Identities=13% Similarity=0.007 Sum_probs=50.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC-CEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEE
Q 018665 37 DQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 115 (352)
Q Consensus 37 ~~i~~~~g~~~a~~~~~~~l~~~~-~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i 115 (352)
..|+++.+|.-+.. +...+.+.| .+|.+.+..-. -...+...+......++ .+.+.+++.++ +...++.
T Consensus 6 ~~v~I~G~G~iG~~-~~~~l~~~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~d~-------~~~~~~~~~~~-~~d~vi~ 75 (118)
T 3ic5_A 6 WNICVVGAGKIGQM-IAALLKTSSNYSVTVADHDLA-ALAVLNRMGVATKQVDA-------KDEAGLAKALG-GFDAVIS 75 (118)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHCSSEEEEEEESCHH-HHHHHHTTTCEEEECCT-------TCHHHHHHHTT-TCSEEEE
T ss_pred CeEEEECCCHHHHH-HHHHHHhCCCceEEEEeCCHH-HHHHHHhCCCcEEEecC-------CCHHHHHHHHc-CCCEEEE
Confidence 35666655544444 444455556 56666554322 22233345666544433 25677777765 6667776
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 116 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 116 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+.|.. ....+.+.|.+. ++..+
T Consensus 76 ~~~~~---------~~~~~~~~~~~~-g~~~~ 97 (118)
T 3ic5_A 76 AAPFF---------LTPIIAKAAKAA-GAHYF 97 (118)
T ss_dssp CSCGG---------GHHHHHHHHHHT-TCEEE
T ss_pred CCCch---------hhHHHHHHHHHh-CCCEE
Confidence 55421 146778888888 87765
No 468
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.51 E-value=1.9e+02 Score=23.43 Aligned_cols=32 Identities=9% Similarity=0.150 Sum_probs=18.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecC
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 67 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~ 67 (352)
...+++|.++...=..+...|.+.|.+|++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITG 37 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 34455555444433555666777787777654
No 469
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=22.45 E-value=1.5e+02 Score=24.08 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=38.5
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
..++..|.+|+.+..+ +.++++.+.+. .++.+|.++....++ ...++++++.+++.
T Consensus 145 ~~L~~~G~~Vi~LG~~------vp~e~l~~~~~~~~~d~V~lS~l~~~~-----~~~~~~~i~~l~~~ 201 (258)
T 2i2x_B 145 ALLRANGYNVVDLGRD------VPAEEVLAAVQKEKPIMLTGTALMTTT-----MYAFKEVNDMLLEN 201 (258)
T ss_dssp HHHHHTTCEEEEEEEE------CCSHHHHHHHHHHCCSEEEEECCCTTT-----TTHHHHHHHHHHTT
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHHcCCCEEEEEeeccCC-----HHHHHHHHHHHHhc
Confidence 5667899999888653 46677766664 578888876654333 23478888888775
No 470
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=22.44 E-value=1.8e+02 Score=24.17 Aligned_cols=48 Identities=6% Similarity=0.046 Sum_probs=31.6
Q ss_pred CCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 018665 93 ENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 141 (352)
Q Consensus 93 ~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~ 141 (352)
.+..+|.+.+++.++ .+...++++..+ .-+..++.+|.+++.+.+.+.
T Consensus 13 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT-GE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 13 KQGKVNVDALKTHAKNLLEKGIDAIFVNGTT-GLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEETSTT-TTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHH
Confidence 445688888777664 466666644332 234567888888888888764
No 471
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=22.40 E-value=1.7e+02 Score=25.35 Aligned_cols=53 Identities=13% Similarity=0.075 Sum_probs=33.5
Q ss_pred CCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEec
Q 018665 36 PDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 88 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~ 88 (352)
...|+-.+++-.+...+..+- .+-.-.|++|...-..-...++.+|.+++.++
T Consensus 93 ~~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~ 146 (364)
T 4h27_A 93 CAHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVG 146 (364)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEEC
T ss_pred CCEEEEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEEC
Confidence 356666666666665444442 23334667776654445577888999998886
No 472
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.34 E-value=2.2e+02 Score=23.49 Aligned_cols=33 Identities=12% Similarity=0.240 Sum_probs=20.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 67 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~ 67 (352)
+...+++|.++...=..+...|.+.|.+|++..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~ 57 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITG 57 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 344555555554433556667777787877654
No 473
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=22.11 E-value=1.5e+02 Score=25.03 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=45.1
Q ss_pred CCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 69 FWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 69 ~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
.|..+...+....++++.+.++.. .-.+...++++.+ +-|++.-|-. .+.++.+++.++|+++ |+.+.+
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~tp~~----~h~~~~~~al~~g-k~vl~EKP~~-----~~~~e~~~l~~~a~~~-g~~~~v 123 (330)
T 3e9m_A 55 AYGSYEELCKDETIDIIYIPTYNQ----GHYSAAKLALSQG-KPVLLEKPFT-----LNAAEAEELFAIAQEQ-GVFLME 123 (330)
T ss_dssp CBSSHHHHHHCTTCSEEEECCCGG----GHHHHHHHHHHTT-CCEEECSSCC-----SSHHHHHHHHHHHHHT-TCCEEE
T ss_pred eeCCHHHHhcCCCCCEEEEcCCCH----HHHHHHHHHHHCC-CeEEEeCCCC-----CCHHHHHHHHHHHHHc-CCeEEE
Confidence 455666666666677777766532 1234444455433 3345555532 3577899999999999 988876
Q ss_pred cccc
Q 018665 149 DEIY 152 (352)
Q Consensus 149 D~~~ 152 (352)
.-.+
T Consensus 124 ~~~~ 127 (330)
T 3e9m_A 124 AQKS 127 (330)
T ss_dssp CCSG
T ss_pred EEhh
Confidence 6543
No 474
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=22.05 E-value=2.7e+02 Score=21.88 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=21.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 69 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~ 69 (352)
+...+++|.++...=..+...|.+.|.+|++..-.
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 34455666555443455666777888888776543
No 475
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.03 E-value=1.8e+02 Score=25.28 Aligned_cols=69 Identities=10% Similarity=0.164 Sum_probs=42.8
Q ss_pred HHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCee----EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEE
Q 018665 75 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR----LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 147 (352)
Q Consensus 75 ~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~----~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~li 147 (352)
+.+...+.++.-+.+.++.+|.+....+-+... +.. ..+ .+ ..+.+..++.+++++|.+.|+++ ++-||
T Consensus 40 d~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~-~~~~~~~g~~-~~-~~~~~g~YT~~di~eiv~YA~~r-gI~VI 112 (367)
T 1yht_A 40 DTISLSGGNFLHLHFSDHENYAIESHLLNQRAE-NAVQGKDGIY-IN-PYTGKPFLSYRQLDDIKAYAKAK-GIELI 112 (367)
T ss_dssp HHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGG-GSEECTTSCE-EC-TTTCCEEBCHHHHHHHHHHHHHT-TCEEE
T ss_pred HHHHHcCCcEEEEEEEcCCCceeeecchhhhhh-hhccccCCCc-CC-CCCCCCCcCHHHHHHHHHHHHHc-CCEEE
Confidence 455677888888888766677665432211110 100 000 01 11234568999999999999999 99888
No 476
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=21.97 E-value=3e+02 Score=21.90 Aligned_cols=97 Identities=9% Similarity=0.082 Sum_probs=47.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH---HhcCCeEEEecccCCCCcccCHHHHHhhcc----
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLT---- 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~---~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~---- 107 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-....... +..+.++..+..+- -|.+.+++.++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMIEQIDE 79 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 3444555555444335556677788888877543322222222 23455666666542 24555555443
Q ss_pred --CCeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 108 --EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 108 --~~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
.+...+|.+.-....+ ...+.+++++..+
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3imf_A 80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVIN 112 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1445544333222211 2345555655554
No 477
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=21.93 E-value=3.5e+02 Score=22.55 Aligned_cols=68 Identities=9% Similarity=0.073 Sum_probs=33.8
Q ss_pred HhcCCeEEEecccCCCCcccCHHHHHhhccC-----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 78 RIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 78 ~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+..|+.-..+-.+.- +..+.+.+.+..+. +.-+++.+.|. .||..++.+.+.+| ++.+||+.=|=|..
T Consensus 100 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn~P~-~tg~~l~~~~~~~L---a~~~pnivgiKdss 172 (301)
T 3m5v_A 100 KEHGADGILSVAPYY--NKPTQQGLYEHYKAIAQSVDIPVLLYNVPG-RTGCEISTDTIIKL---FRDCENIYGVKEAS 172 (301)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEECHH-HHSCCCCHHHHHHH---HHHCTTEEEEEECS
T ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEeCch-hhCcCCCHHHHHHH---HhcCCCEEEEEeCC
Confidence 345555544443321 12344444443321 33444545454 36888885555544 44425777776654
No 478
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=21.84 E-value=3.3e+02 Score=22.21 Aligned_cols=69 Identities=14% Similarity=0.085 Sum_probs=37.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHH---HhcCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 34 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 34 ~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~---~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+....+++|.++...=..+...|.+.|.+|++.+-.-....... ...+.++..+..+- -|.+.+++.++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 97 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVR 97 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHH
Confidence 34455666666555445566677788888877654332222222 23466677776553 25555555553
No 479
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.81 E-value=75 Score=29.21 Aligned_cols=29 Identities=21% Similarity=0.195 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEeccccccccc
Q 018665 128 KNLLDEIARIVAKHPRLLVLSDEIYEHIIY 157 (352)
Q Consensus 128 ~~~l~~l~~~~~~~~~~~livD~~~~~~~~ 157 (352)
.++++++++.|+++ |+-||+|-+.-+...
T Consensus 92 ~~dfk~Lv~~aH~~-GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 92 DAQLRQAASALGGA-GVKVLYDVVPNHMNR 120 (527)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHHC-CCEEEEEEeecCcCC
Confidence 67899999999999 999999999876543
No 480
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=21.79 E-value=3.1e+02 Score=21.87 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=20.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 67 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~ 67 (352)
....+++|.++...=..+...|.+.|.+|++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFS 38 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 345566665554444556666777787777654
No 481
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=21.74 E-value=1.7e+02 Score=24.66 Aligned_cols=72 Identities=10% Similarity=0.112 Sum_probs=46.0
Q ss_pred CCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 70 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 70 ~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
|..+...+....++++.+.++.. ...+...++++.+ +-|++.-|-. .+.++.+++.++++++ ++.+.+.
T Consensus 52 ~~~~~~~l~~~~~D~V~i~tp~~----~h~~~~~~al~~g-k~v~~EKP~~-----~~~~~~~~l~~~a~~~-g~~~~v~ 120 (331)
T 4hkt_A 52 VRTIDAIEAAADIDAVVICTPTD----THADLIERFARAG-KAIFCEKPID-----LDAERVRACLKVVSDT-KAKLMVG 120 (331)
T ss_dssp ECCHHHHHHCTTCCEEEECSCGG----GHHHHHHHHHHTT-CEEEECSCSC-----SSHHHHHHHHHHHHHT-TCCEEEC
T ss_pred cCCHHHHhcCCCCCEEEEeCCch----hHHHHHHHHHHcC-CcEEEecCCC-----CCHHHHHHHHHHHHHc-CCeEEEc
Confidence 55666667666677777766532 2344445555433 4456555532 4577899999999999 9888866
Q ss_pred ccc
Q 018665 150 EIY 152 (352)
Q Consensus 150 ~~~ 152 (352)
-.+
T Consensus 121 ~~~ 123 (331)
T 4hkt_A 121 FNR 123 (331)
T ss_dssp CGG
T ss_pred ccc
Confidence 543
No 482
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=21.69 E-value=99 Score=24.81 Aligned_cols=36 Identities=25% Similarity=0.208 Sum_probs=26.4
Q ss_pred CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEe
Q 018665 108 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 148 (352)
Q Consensus 108 ~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~liv 148 (352)
-.+..+++.-. |..|.... ..++.++|++| |+.++.
T Consensus 177 l~Pa~VicEi~-~ddG~mar---~~~l~~fA~~h-~l~~it 212 (227)
T 1snn_A 177 LVPITTICEMM-GDDGNAMS---KNETKRYAEKH-NLIYLS 212 (227)
T ss_dssp SCSEEEEEEEB-CTTSSBCC---HHHHHHHHHHH-TCCEEE
T ss_pred CCceEEEEEEe-CCCCCcCC---HHHHHHHHHHc-CCcEEE
Confidence 35666554444 56799999 88888888899 988874
No 483
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=21.59 E-value=2.7e+02 Score=23.35 Aligned_cols=72 Identities=13% Similarity=0.108 Sum_probs=41.3
Q ss_pred HHHhcCCeEEEecccCCC-CcccCHHHHHhhcc-----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 76 MARIADATPVILPTRISE-NFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 76 ~~~~~g~~v~~i~~~~~~-~~~~d~~~l~~~l~-----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
.++..|+.-..+-.+.-. .+..+.+.+.+..+ -+.-+++.+.|. ||..++.+ -+.++++++||+.=|=|
T Consensus 98 ~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~--tg~~l~~~---~~~~La~~~pnIvgiK~ 172 (309)
T 3fkr_A 98 RAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA--SGTALSAP---FLARMAREIEQVAYFXI 172 (309)
T ss_dssp HHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG--GCCCCCHH---HHHHHHHHSTTEEEEEE
T ss_pred HHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC--CCCCCCHH---HHHHHHhhCCCEEEEEC
Confidence 344567766655444211 02356666655442 134456667773 89999954 45555556678877775
Q ss_pred ccc
Q 018665 150 EIY 152 (352)
Q Consensus 150 ~~~ 152 (352)
++.
T Consensus 173 ~~~ 175 (309)
T 3fkr_A 173 ETP 175 (309)
T ss_dssp CSS
T ss_pred CCc
Confidence 554
No 484
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=21.53 E-value=3.2e+02 Score=21.91 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=20.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecC
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 67 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~ 67 (352)
....+++|.++...=..+...|.+.|.+|++.+
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 345567776655444556667777787777653
No 485
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=21.52 E-value=2e+02 Score=24.30 Aligned_cols=62 Identities=13% Similarity=0.125 Sum_probs=39.8
Q ss_pred EecccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC--CCEEEEe
Q 018665 86 ILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH--PRLLVLS 148 (352)
Q Consensus 86 ~i~~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~liv 148 (352)
.+..+.+.+..+|.+.+++.++ .+...++++. ++.-+..++.+|.+++.+.+.+. .++++|+
T Consensus 29 alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~G-tTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 29 ALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVG-TTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp ECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred eeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCc-cccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3333434556799999888774 4677776443 33345668888888988888653 1455554
No 486
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=21.38 E-value=3.1e+02 Score=21.76 Aligned_cols=95 Identities=13% Similarity=0.098 Sum_probs=47.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCC-ChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc------C
Q 018665 36 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLT------E 108 (352)
Q Consensus 36 ~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~-~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~------~ 108 (352)
...+++|.++...=..+...|.+.|.+|++..-.-. .....++..+.++..+..+. -|.+.+++.++ .
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFALAEREFG 78 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHHHHHHHcC
Confidence 345566655544445566677777878776543222 12223334466666666542 25566665553 1
Q ss_pred CeeEEEEcCCCCCcc--cCCCHHHHHHHH
Q 018665 109 KSRLLILCSPSNPTG--SVYPKNLLDEIA 135 (352)
Q Consensus 109 ~~~~i~i~~p~nptG--~~~~~~~l~~l~ 135 (352)
+...+|.+.-..+.+ ...+.+++++..
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~ 107 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKII 107 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 455555433222222 123555555444
No 487
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=21.32 E-value=3.3e+02 Score=22.06 Aligned_cols=67 Identities=13% Similarity=0.037 Sum_probs=34.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHh---cCCeEEEecccCCCCcccCHHHHHhhcc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLT 107 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~---~g~~v~~i~~~~~~~~~~d~~~l~~~l~ 107 (352)
+...+++|.++...=..+...|.+.|.+|++.+-.-.......+. .+ ++..+..+- -|.+.+++.++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~ 97 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQ 97 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHH
Confidence 444566665554444556666777788887764322222222222 23 555665542 24555555443
No 488
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=21.31 E-value=3.4e+02 Score=22.17 Aligned_cols=68 Identities=15% Similarity=0.132 Sum_probs=35.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHH---h-----cCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-----ADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~---~-----~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
+...+++|.++...=..+...|.+.|.+|++..-.-.......+ . .+.++..+..+. -|.+.+++.+
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 91 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-----RNEEEVNNLV 91 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-----CCHHHHHHHH
Confidence 34556666555444455666677778777765432211222221 1 355666666542 2556666555
Q ss_pred c
Q 018665 107 T 107 (352)
Q Consensus 107 ~ 107 (352)
+
T Consensus 92 ~ 92 (303)
T 1yxm_A 92 K 92 (303)
T ss_dssp H
T ss_pred H
Confidence 4
No 489
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=21.26 E-value=1.6e+02 Score=25.08 Aligned_cols=72 Identities=18% Similarity=0.180 Sum_probs=40.6
Q ss_pred CCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEec
Q 018665 70 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 149 (352)
Q Consensus 70 ~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD 149 (352)
|..+...+....++++.+..+.. .-.+...++++.+ +-|++.-|-. .+.++.++|.++|+++ |+.+.+-
T Consensus 71 ~~~~~~ll~~~~vD~V~i~tp~~----~H~~~~~~al~aG-khVl~EKPla-----~~~~ea~~l~~~a~~~-g~~~~v~ 139 (340)
T 1zh8_A 71 FDSYEELLESGLVDAVDLTLPVE----LNLPFIEKALRKG-VHVICEKPIS-----TDVETGKKVVELSEKS-EKTVYIA 139 (340)
T ss_dssp ESCHHHHHHSSCCSEEEECCCGG----GHHHHHHHHHHTT-CEEEEESSSS-----SSHHHHHHHHHHHHHC-SSCEEEE
T ss_pred cCCHHHHhcCCCCCEEEEeCCch----HHHHHHHHHHHCC-CcEEEeCCCC-----CCHHHHHHHHHHHHHc-CCeEEEE
Confidence 44455555555555555554421 1233344444433 3344444432 3577899999999999 9888765
Q ss_pred ccc
Q 018665 150 EIY 152 (352)
Q Consensus 150 ~~~ 152 (352)
-.+
T Consensus 140 ~~~ 142 (340)
T 1zh8_A 140 ENF 142 (340)
T ss_dssp CGG
T ss_pred ecc
Confidence 443
No 490
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=21.21 E-value=3.5e+02 Score=22.64 Aligned_cols=69 Identities=10% Similarity=0.122 Sum_probs=43.4
Q ss_pred cEEEe---CChHHHHHHHHHHhcCCCCEEEecCCCC----CC--------hHHHHHhcCCeEEEecccCCCCcccCHHHH
Q 018665 38 QILVS---NGAKQSILQAVLAVCSPGDEVIIPAPFW----VS--------YPEMARIADATPVILPTRISENFLLDPKVL 102 (352)
Q Consensus 38 ~i~~~---~g~~~a~~~~~~~l~~~~~~vl~~~~~~----~~--------~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l 102 (352)
.|+.. +++.+++..+-.+-...-|.+++..|.| .+ |...++..+..+..++.+. .+..++++.+
T Consensus 79 pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~-tg~~l~~~~~ 157 (309)
T 3fkr_A 79 PVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA-SGTALSAPFL 157 (309)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG-GCCCCCHHHH
T ss_pred cEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC-CCCCCCHHHH
Confidence 45554 3455555544444333348888888877 22 2345566788888888874 5666788888
Q ss_pred Hhhcc
Q 018665 103 ESKLT 107 (352)
Q Consensus 103 ~~~l~ 107 (352)
.+..+
T Consensus 158 ~~La~ 162 (309)
T 3fkr_A 158 ARMAR 162 (309)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87764
No 491
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=21.16 E-value=2.4e+02 Score=21.45 Aligned_cols=72 Identities=15% Similarity=0.308 Sum_probs=40.0
Q ss_pred EEecCCCCCCh----HHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc--CCeeEEEEcCCCCCcccCCCHHHHHHHHH
Q 018665 63 VIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIAR 136 (352)
Q Consensus 63 vl~~~~~~~~~----~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~--~~~~~i~i~~p~nptG~~~~~~~l~~l~~ 136 (352)
|++-+ .+.++ .+.++..|.+++.++.+ .+.+++.+.+. ....+|+...|.+|.-. ....++.+
T Consensus 3 i~iiD-n~~s~~~~i~~~l~~~G~~~~v~~~~------~~~~~i~~~l~~~~~~~iil~gGpg~~~~~----~~~~~l~~ 71 (192)
T 1i1q_B 3 ILLLD-NIDSFTWNLADQLRTNGHNVVIYRNH------IPAQTLIDRLATMKNPVLMLSPGPGVPSEA----GCMPELLT 71 (192)
T ss_dssp EEEEE-CSCSSHHHHHHHHHHTTCEEEEEETT------SCSHHHHHHHTTCSSEEEEECCCSSCGGGS----TTHHHHHH
T ss_pred EEEEE-CCccHHHHHHHHHHHCCCeEEEEECC------CCHHHHHHHhhhccCCeEEECCCCcCchhC----chHHHHHH
Confidence 44444 34455 67888999999888754 24566655543 23445554555554321 12445555
Q ss_pred HHHhCCCEEEE
Q 018665 137 IVAKHPRLLVL 147 (352)
Q Consensus 137 ~~~~~~~~~li 147 (352)
.+ +. +.+++
T Consensus 72 ~~-~~-~~Pil 80 (192)
T 1i1q_B 72 RL-RG-KLPII 80 (192)
T ss_dssp HH-BT-TBCEE
T ss_pred HH-hc-CCCEE
Confidence 43 45 66666
No 492
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=21.11 E-value=3.6e+02 Score=22.43 Aligned_cols=94 Identities=12% Similarity=-0.023 Sum_probs=48.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhccCCeeEEE
Q 018665 35 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 114 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~~~~~i~ 114 (352)
+...|++|.++...=..++..|.+.|.+|.+.+-.-.. .+..++..++ .|.+.+.+.+. ++..|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl-------~d~~~~~~~~~-~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSL-------EDGQALSDAIM-GVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCT-------TCHHHHHHHHT-TCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCc-------CCHHHHHHHHh-CCCEEE
Confidence 34567777664444455666676667666654322111 3444444433 26777877776 666666
Q ss_pred EcCC-CCCcccCC------CHHHHHHHHHHHHhCCCE
Q 018665 115 LCSP-SNPTGSVY------PKNLLDEIARIVAKHPRL 144 (352)
Q Consensus 115 i~~p-~nptG~~~------~~~~l~~l~~~~~~~~~~ 144 (352)
.+.. ........ ...-...+++.|++. ++
T Consensus 83 h~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~ 118 (347)
T 4id9_A 83 HLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GV 118 (347)
T ss_dssp ECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TC
T ss_pred ECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 5443 22211110 001135678888887 65
No 493
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=21.09 E-value=1.7e+02 Score=24.64 Aligned_cols=59 Identities=8% Similarity=0.013 Sum_probs=39.0
Q ss_pred ccCCCCcccCHHHHHhhcc----CCeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCEEEEe
Q 018665 89 TRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLS 148 (352)
Q Consensus 89 ~~~~~~~~~d~~~l~~~l~----~~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~~liv 148 (352)
.+...+..+|.+.+++.++ .+...++++.- +.-+..++.+|.+++.+.+.+. .++++|+
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 18 TPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGI-LGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTG-GGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCcc-CcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 3334556799998888774 46777765443 2334668888888998888664 1466664
No 494
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=21.08 E-value=2e+02 Score=23.97 Aligned_cols=68 Identities=18% Similarity=0.200 Sum_probs=33.9
Q ss_pred HHhcCCeEEEecccCCCCcccCHHHHHhhccC-----CeeEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 77 ARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 77 ~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~~-----~~~~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
++..|+.-..+-.+.- +..+.+.+.+..+. +.-+++.+.|. .||..++.+.+ .+++ ++||+.=|=|.+
T Consensus 92 a~~~Gadavlv~~P~y--~~~~~~~l~~~f~~ia~a~~lPiilYn~P~-~tg~~l~~~~~---~~La-~~pnivgiK~ss 164 (291)
T 3tak_A 92 AKDLGADAALLVTPYY--NKPTQEGLYQHYKAIAEAVELPLILYNVPG-RTGVDLSNDTA---VRLA-EIPNIVGIKDAT 164 (291)
T ss_dssp HHHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEECHH-HHSCCCCHHHH---HHHT-TSTTEEEEEECS
T ss_pred HHhcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEeccc-ccCCCCCHHHH---HHHH-cCCCEEEEEeCC
Confidence 3445665554443321 12344554443321 33444545453 36888884444 4444 456776666653
No 495
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=21.07 E-value=2e+02 Score=24.16 Aligned_cols=89 Identities=10% Similarity=0.079 Sum_probs=46.9
Q ss_pred EEeCChHHHHHHHHHHhcCC--CCEEEecCCCCCChHHHHHhcCCeEEEecccCCCCcccCHHHHHhhcc-CCeeEEEEc
Q 018665 40 LVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILC 116 (352)
Q Consensus 40 ~~~~g~~~a~~~~~~~l~~~--~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l~-~~~~~i~i~ 116 (352)
++.+|.-+.+..++...... +-+|..--..+......++..|+.+..++.........+ +++.+.++ .++.++++.
T Consensus 110 vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r~~~~-~~~~~~l~~~~~DliVla 188 (302)
T 3o1l_A 110 LMASRESHCLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPYYHVPVDPKDKEPAF-AEVSRLVGHHQADVVVLA 188 (302)
T ss_dssp EEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCEEECCCCSSCCHHHH-HHHHHHHHHTTCSEEEES
T ss_pred EEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCEEEcCCCcCCHHHHH-HHHHHHHHHhCCCEEEHh
Confidence 44455545666666654332 123433333334456778999999988876422211111 23444443 367777764
Q ss_pred CCCCCcccCCCHHHHHH
Q 018665 117 SPSNPTGSVYPKNLLDE 133 (352)
Q Consensus 117 ~p~nptG~~~~~~~l~~ 133 (352)
. .+.++|.+.++.
T Consensus 189 g----ym~IL~~~~l~~ 201 (302)
T 3o1l_A 189 R----YMQILPPQLCRE 201 (302)
T ss_dssp S----CCSCCCTTHHHH
T ss_pred H----hhhhcCHHHHhh
Confidence 3 245666554443
No 496
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=21.06 E-value=2e+02 Score=24.66 Aligned_cols=55 Identities=9% Similarity=0.013 Sum_probs=36.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-cCCCCEEEecCCCCCChHHHHHhcCCeEEEecc
Q 018665 35 TPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 89 (352)
Q Consensus 35 ~~~~i~~~~g~~~a~~~~~~~l-~~~~~~vl~~~~~~~~~~~~~~~~g~~v~~i~~ 89 (352)
....|+-.++|-.+...+..+- .+-.-.|++|...-..-...++.+|.+++.++-
T Consensus 75 ~~~~vv~~SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~ 130 (346)
T 3l6b_A 75 KPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEP 130 (346)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 3455766677777766555543 333346777766554456788899999988863
No 497
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=20.82 E-value=2.5e+02 Score=23.33 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=15.3
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCEEEEeccc
Q 018665 112 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 151 (352)
Q Consensus 112 ~i~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~~livD~~ 151 (352)
+++.+.|. .||..++.+.+.+ +||+.=|=|.+
T Consensus 126 iilYn~P~-~tg~~l~~~~~~~-------~pnIvgiKds~ 157 (293)
T 1w3i_A 126 VYLYNYPT-ATGKDIDAKVAKE-------IGCFTGVKDTI 157 (293)
T ss_dssp EEEEECHH-HHSCCCCHHHHHH-------HCCEEEEEECC
T ss_pred EEEEECch-hhCcCCCHHHHHh-------cCCEEEEEeCC
Confidence 34434443 2566666444443 24555554543
No 498
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=20.70 E-value=3.3e+02 Score=21.86 Aligned_cols=101 Identities=8% Similarity=0.011 Sum_probs=52.2
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEecCCCCCC----hHHHHHhcCCeEEEecccCCCCcccCHHHHHhhc
Q 018665 31 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKL 106 (352)
Q Consensus 31 ~~~~~~~~i~~~~g~~~a~~~~~~~l~~~~~~vl~~~~~~~~----~~~~~~~~g~~v~~i~~~~~~~~~~d~~~l~~~l 106 (352)
...++...+++|.++...=..+...|.+.|.+|++..-.-.. ....++..+.++..+..+. -|.+.+++.+
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 98 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA-----ASESDFIEAI 98 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 334455566776666554456666777788777765432221 2233445677777777653 2455555544
Q ss_pred c------CCeeEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 018665 107 T------EKSRLLILCSPSNPTG--SVYPKNLLDEIAR 136 (352)
Q Consensus 107 ~------~~~~~i~i~~p~nptG--~~~~~~~l~~l~~ 136 (352)
+ .+...+|.+......+ ...+.+++++..+
T Consensus 99 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 99 QTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 3 2455555433322222 2345555555443
No 499
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=20.66 E-value=1.5e+02 Score=25.39 Aligned_cols=26 Identities=4% Similarity=-0.083 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEecccc
Q 018665 126 YPKNLLDEIARIVAKHPRLLVLSDEIY 152 (352)
Q Consensus 126 ~~~~~l~~l~~~~~~~~~~~livD~~~ 152 (352)
.+.++.+++.++|+++ ++.+.+--.+
T Consensus 129 ~~~~ea~~l~~~a~~~-g~~l~vg~~~ 154 (393)
T 4fb5_A 129 PAYADAERMLATAERS-GKVAALGYNY 154 (393)
T ss_dssp SSHHHHHHHHHHHHHS-SSCEEECCGG
T ss_pred ccHHHHHHhhhhHHhc-CCcccccccc
Confidence 3577899999999999 9888876543
No 500
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=20.65 E-value=2.7e+02 Score=23.07 Aligned_cols=11 Identities=18% Similarity=0.362 Sum_probs=6.2
Q ss_pred CEEEecCCCCC
Q 018665 61 DEVIIPAPFWV 71 (352)
Q Consensus 61 ~~vl~~~~~~~ 71 (352)
|.+++..|.|.
T Consensus 93 davlv~~P~y~ 103 (288)
T 2nuw_A 93 LGVSSHSPYYF 103 (288)
T ss_dssp SEEEECCCCSS
T ss_pred CEEEEcCCcCC
Confidence 55555555554
Done!