BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018667
(352 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35075|DSCR3_MOUSE Down syndrome critical region protein 3 homolog OS=Mus musculus
GN=Dscr3 PE=2 SV=1
Length = 297
Score = 218 bits (554), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 182/323 (56%), Gaps = 35/323 (10%)
Query: 36 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESL 95
+T++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+
Sbjct: 3 TTLDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAF 62
Query: 96 YGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYL 155
Y +KPI+I+ + ++ G+I SG TEVPF L G + L YET+HG +NIQY
Sbjct: 63 YNSVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKVL---YETYHGVFVNIQYT 119
Query: 156 VTVDIMRGYLHKSLSATVEFIVET--DKADLLERPVSPEMVVFYIT----QDTQRHPLLP 209
+ D+ R L K L+ T EFIV + K L PV F IT Q+ + LP
Sbjct: 120 LRCDMRRSLLAKDLTKTCEFIVHSAPQKGKLTPSPVD-----FTITPETLQNVKERASLP 174
Query: 210 ELKSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISET 268
+ F + G + ST C++ P+TGEL VE S I SI++ L+R+E+ E +
Sbjct: 175 K-----FFIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDA 229
Query: 269 SLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTVLAGPFSVEFKVSVVISFRSELSKLHK 328
+ IQ Q+ADGD+CRN+++P+Y++ PRL TCPT+ F VEF+V+VV+ ++
Sbjct: 230 TEIQNIQIADGDICRNLSVPLYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHAD------ 283
Query: 329 KSDPTTPRLWLAMETLPLELVRT 351
L E PL+L RT
Sbjct: 284 ---------HLITENFPLKLCRT 297
>sp|Q5RF33|DSCR3_PONAB Down syndrome critical region protein 3 homolog OS=Pongo abelii
GN=DSCR3 PE=2 SV=1
Length = 297
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 178/320 (55%), Gaps = 31/320 (9%)
Query: 36 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESL 95
+ ++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+
Sbjct: 3 TALDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAF 62
Query: 96 YGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYL 155
Y +KPI+I+ + E+ G+ SG TE+PF L G + L YET+HG +NIQY
Sbjct: 63 YNSVKPIQIINSNIEMVKPGKFPSGKTEIPFEFPLHVKGNKVL---YETYHGVFVNIQYT 119
Query: 156 VTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYIT----QDTQRHPLLPEL 211
+ D+ R L K L+ T EFIV + + SP V F IT Q+ + LLP+
Sbjct: 120 LRCDMKRSLLAKDLTKTCEFIVHSAPQ---KGKFSPSPVHFTITPETLQNARERALLPK- 175
Query: 212 KSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSL 270
F + G + ST C + P+TGEL VE+S I S+++ L+R+E+ E + +
Sbjct: 176 ----FLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATE 231
Query: 271 IQTTQVADGDVCRNMTLPIYVILPRLLTCPTVLAGPFSVEFKVSVVISFRSELSKLHKKS 330
IQ Q+ADGDVCR +++PIY++ PRL TCPT+ F VEF+V++V+ +
Sbjct: 232 IQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVVLLHPD-------- 283
Query: 331 DPTTPRLWLAMETLPLELVR 350
L E PL+L R
Sbjct: 284 -------HLITENFPLKLCR 296
>sp|O14972|DSCR3_HUMAN Down syndrome critical region protein 3 OS=Homo sapiens GN=DSCR3
PE=2 SV=1
Length = 297
Score = 211 bits (536), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 178/320 (55%), Gaps = 31/320 (9%)
Query: 36 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESL 95
+ ++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+
Sbjct: 3 TALDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAF 62
Query: 96 YGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYL 155
Y +KPI+I+ + E+ G+ SG TE+PF L G + L YET+HG +NIQY
Sbjct: 63 YNSVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKVL---YETYHGVFVNIQYT 119
Query: 156 VTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYIT----QDTQRHPLLPEL 211
+ D+ R L K L+ T EFIV + + +P V F IT Q+ + LLP+
Sbjct: 120 LRCDMKRSLLAKDLTKTCEFIVHSAPQ---KGKFTPSPVDFTITPETLQNVKERALLPK- 175
Query: 212 KSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSL 270
F + G + ST C + P+TGEL VE+S I S+++ L+R+E+ E + +
Sbjct: 176 ----FLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATE 231
Query: 271 IQTTQVADGDVCRNMTLPIYVILPRLLTCPTVLAGPFSVEFKVSVVISFRSELSKLHKKS 330
IQ Q+ADGDVCR +++PIY++ PRL TCPT+ F VEF+V++V+ +
Sbjct: 232 IQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVVLLHPD-------- 283
Query: 331 DPTTPRLWLAMETLPLELVR 350
L E PL+L R
Sbjct: 284 -------HLITENFPLKLCR 296
>sp|Q54DI8|DSCR3_DICDI Down syndrome critical region protein 3 homolog OS=Dictyostelium
discoideum GN=DDB_G0292212 PE=3 SV=1
Length = 304
Score = 177 bits (450), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 172/320 (53%), Gaps = 23/320 (7%)
Query: 36 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESL 95
+ +++KL + ++IYRP + G +VI S + H G+ + V G+ LQ+ S G+ E+
Sbjct: 3 NVLDLKLKKIDKIYRPGSKVSGNVVINSKDDMSHSGVTIVVEGTVQLQLSSKSVGLFEAF 62
Query: 96 YGVIKPIKILKKSQEIRTSG-RIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQY 154
Y +KPI ++ + + G + +G TE+PF L+ + L Y+T+HG +NIQY
Sbjct: 63 YNSLKPITLMHYTISVTNGGGKFQAGITELPFEFTLEPLPNQQL---YDTYHGVFVNIQY 119
Query: 155 LVTVDIMRGYLHKSLSATVEFIVE--TDKADLLERPVSPEMVVFYITQDT-QRHPLLPEL 211
+ D+ RG L K LS T+EFIVE + ++L + ++ F IT D+ + +
Sbjct: 120 SIKCDVKRGILSKDLSKTIEFIVEVPSQNKEVLMKSTPESLITFNITPDSLVNFKKISKA 179
Query: 212 KSGGFKVTGKM-STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSL 270
FK++G + S C++ + G + +E++ I S+++ L+R+E+ + E +
Sbjct: 180 DVPTFKISGGLVSAICNINEAFQGHMIIESADTVIKSVELQLVRVETCGCADGYAREVTE 239
Query: 271 IQTTQVADGDVCRNMTLPIYVILPRLLTCPTVLAGPFSVEFKVSVVISFRSELSKLHKKS 330
IQ Q+ADGD+ RN +P+Y++ PRL TC + F +EF+V++VI L H
Sbjct: 240 IQNIQIADGDIWRNFKIPLYMVFPRLFTCISTAGKTFKIEFEVNLVIM----LEDGH--- 292
Query: 331 DPTTPRLWLAMETLPLELVR 350
L E P++L+R
Sbjct: 293 --------LITENFPIKLIR 304
>sp|Q8I4T1|VPS26_PLAF7 Vacuolar protein sorting-associated protein 26 OS=Plasmodium
falciparum (isolate 3D7) GN=PFL2415w PE=3 SV=1
Length = 297
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 48 IYRPSEPLQGK--IVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKIL 105
I+ E + G I +K HYGI L + G N+ ++ S+ ++P L
Sbjct: 38 IFSDGEDINGTATISLKPGKKFEHYGIKLELIGQINILNDKANSYDFFSISKDLEPPGFL 97
Query: 106 KKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYL 165
+S++ + FS KQH E++ G ++ ++Y V ++I++GY
Sbjct: 98 VESKQFKWK-----------FSAVDKQH---------ESYFGTNVQLRYFVRLNIIKGY- 136
Query: 166 HKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPELKSGGFKVTGKMSTQ 225
++ ++FIV+ +L P + + + H KS +
Sbjct: 137 SGNIQKEIDFIVQ----NLCIPPEINNTIKMEVGIEDCLHIEFEYDKS-----------K 181
Query: 226 CSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNM 285
L D + G++ + I +++ +++ME+ +G+ +ET + ++ DG ++
Sbjct: 182 YHLKDVVVGKVYFLLVRIKIKHMELDIIKMETSGVGKNYTTETVTLSKFEIMDGSPIKSE 241
Query: 286 TLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
+P+ + L PT + FSV++ ++++I
Sbjct: 242 CIPVRLYLSGFDLTPTYKNIQNKFSVKYYINLII 275
>sp|Q9FJD0|VP26A_ARATH Vacuolar protein sorting-associated protein 26A OS=Arabidopsis
thaliana GN=VPS26A PE=2 SV=1
Length = 302
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 41/296 (13%)
Query: 46 NRIYRPSEPLQGKIVIK--SSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIK 103
N +++ E + GKI I+ + H G+ + + G + G+ SL
Sbjct: 39 NPLFQSQETIAGKINIEPYQGKKVEHNGVKVELLGQIEMYFDRGNFYDFTSL-------- 90
Query: 104 ILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRG 163
+EI G I T PF + ++E YET++G ++ ++Y++ V + RG
Sbjct: 91 ----VREIDVPGEIYERKT-YPFEFS-------SVEMPYETYNGVNVRLRYVLKVTVTRG 138
Query: 164 YLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPELKSGGFKVTGKMS 223
Y S+ +F+V P+ P I + + + F+
Sbjct: 139 YA-GSIVEYQDFVVRN------YVPLPP------INNSIKMEVGIEDCLHIEFEYN---K 182
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++D+ + R ES G ET + ++ DG R
Sbjct: 183 SKYHLKDVILGKIYFLLVRIKIKNMDLEIRRRESTGAGANTHVETETLAKFELMDGAPVR 242
Query: 284 NMTLPIYVILPRLLTCPT--VLAGPFSVEFKVSVVISFRSELSKLHKKSDPTTPRL 337
++P+ V L PT + FSV++ +++V+ E + K+ + T RL
Sbjct: 243 GESIPVRVFLTPYDLTPTHKNINNKFSVKYYLNLVL-VDEEDRRYFKQQEITLYRL 297
>sp|Q55CA0|VPS26_DICDI Vacuolar protein sorting-associated protein 26 OS=Dictyostelium
discoideum GN=vps26 PE=2 SV=1
Length = 349
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 45/299 (15%)
Query: 52 SEPLQGKIVI---KSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKS 108
+EP+ GK+ I + + I H GI + G L G+ SL
Sbjct: 45 NEPVSGKVSINIKEKTKKIEHTGIRVEFVGQIELFYDRGNHYEFTSL------------- 91
Query: 109 QEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKS 168
+R G T FS + N+E+ YE+++G ++ ++Y V + I R +
Sbjct: 92 --VRELAPAGELTENKTFSYDFS-----NVEKQYESYNGTNVRLRYFVRLTIGRSFASNI 144
Query: 169 LSATVEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPELKSGGFKVTGKMSTQCSL 228
+ +++ + ++ P S + + + H KS + L
Sbjct: 145 VKEYDIWVI-----NFVKPPESNSNIKMEVGIEDCLHIEFEYNKS-----------KYHL 188
Query: 229 LDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLP 288
D I G++ + I ++I L++ ES G + +E+ + ++ DG R ++P
Sbjct: 189 KDVIIGKIYFLLVRIKIKYMEIALIKRESTGSGPNVFNESETLTKFEIMDGAPVRGESIP 248
Query: 289 IYVILPRLLTCPTV--LAGPFSVEFKVSVVISFRSELSKLHKKSDPTTPRLWLAMETLP 345
+ + L PT + FSV++ +++ + E K + K T LW T P
Sbjct: 249 VRLFLSVFDLTPTYRSVHNKFSVKYFLNLALV--DEDDKKYFKQQEIT--LWRRGVTKP 303
>sp|O01258|VPS26_CAEEL Vacuolar protein sorting-associated protein 26 OS=Caenorhabditis
elegans GN=vps-26 PE=2 SV=2
Length = 356
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 106/261 (40%), Gaps = 44/261 (16%)
Query: 90 GVVESLYGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGAD 149
G +E Y + ++E+ G + + + PF N N+E+ +ET+ G +
Sbjct: 73 GQIEVYYDRGNQQDFISLTRELARPGDL-TQNAQFPFEFN-------NVEKPFETYMGTN 124
Query: 150 INIQYLVTVDIMRGY--LHKSLSATVEFIV---ETDKADLLERPVSPEMVVFYITQDTQR 204
+ ++Y + V ++R L K L V + + DK+ +E + + + + +
Sbjct: 125 VKLRYFLRVTVIRRLTDLTKELDLVVHALSSYPDNDKSIKMEVGIEDCLHIEFEYNKNKY 184
Query: 205 HPLLPELKSGGFKVTGKMSTQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKI 264
H L D I G++ + I ++I +L+ E + G
Sbjct: 185 H----------------------LQDVIVGKIYFLLVRIKIKYMEIAILKTEVVGSGPNT 222
Query: 265 ISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI----- 317
E+ + ++ DG R ++PI + L P++ + FSV++ +++V+
Sbjct: 223 FKESETVAKFEIMDGAPVRGESIPIRLFLAGYDLAPSMRDVGKKFSVKYFLNLVLVDEED 282
Query: 318 --SFRSELSKLHKKSDPTTPR 336
F+ + L +K+D R
Sbjct: 283 RRYFKQQEVTLWRKADKVMRR 303
>sp|Q9T091|VP26B_ARATH Vacuolar protein sorting-associated protein 26B OS=Arabidopsis
thaliana GN=VPS26B PE=2 SV=2
Length = 303
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 142 YETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQD 201
YET++G ++ ++Y++ V + RGY + +E+ +L+ R +P + I
Sbjct: 117 YETYNGVNVRLRYVLKVTVTRGYA----GSILEY------QELVVRNYAP---LPDINNS 163
Query: 202 TQRHPLLPELKSGGFKVTGKMSTQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLG 261
+ + + F+ ++ L D I G++ + + ++D+ + R ES G
Sbjct: 164 IKMEVGIEDCLHIEFEYN---KSKYHLKDVILGKIYFLLVRIKMKNMDLEIRRRESTGAG 220
Query: 262 EKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPT--VLAGPFSVEFKVSVVISF 319
ET + ++ DG R ++P+ + L PT + FSV++ +++V+
Sbjct: 221 ANTHVETETLAKFELMDGTPVRGESIPVRLFLAPYDLTPTHRNINNKFSVKYYLNLVL-V 279
Query: 320 RSELSKLHKKSDPTTPRL 337
E + K+ + T RL
Sbjct: 280 DEEDRRYFKQQEITLYRL 297
>sp|Q6DFB9|V26BB_XENLA Vacuolar protein sorting-associated protein 26B-B OS=Xenopus laevis
GN=vps26b-b PE=2 SV=1
Length = 337
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++I +++ E+ G + E I ++ DG R
Sbjct: 181 SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVR 240
Query: 284 NMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
++PI + L PT+ + FSV + +++V+
Sbjct: 241 GESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVL 276
>sp|Q96450|1433A_SOYBN 14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1
Length = 257
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 151 NIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPE 210
N ++ + RG + LS + I+ +++L+ SPE VFY+ H L E
Sbjct: 79 NEDHVAIIKEYRGKIEAELSKICDGILNLLESNLIPSAASPESKVFYLKMKGDYHRYLAE 138
Query: 211 LKSGGFKVTGKMSTQCSLLDPITGELTVEASSVPIHSIDIHL 252
K+G + K + + +LL + + A P H I + L
Sbjct: 139 FKTGAER---KEAAESTLLAYKSAQDIALADLAPTHPIRLGL 177
>sp|Q68F29|V26BA_XENLA Vacuolar protein sorting-associated protein 26B-A OS=Xenopus laevis
GN=vps26b-a PE=2 SV=1
Length = 337
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++I +++ E+ G + E I ++ DG R
Sbjct: 181 SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVR 240
Query: 284 NMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
++PI + L PT+ + FSV + +++V+
Sbjct: 241 GESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVL 276
>sp|Q5BKM4|VP26B_XENTR Vacuolar protein sorting-associated protein 26B OS=Xenopus
tropicalis GN=vps26b PE=2 SV=1
Length = 337
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++I +++ E+ G + E I ++ DG R
Sbjct: 181 SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVR 240
Query: 284 NMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
++PI + L PT+ + FSV + +++V+
Sbjct: 241 GESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVL 276
>sp|Q8C0E2|VP26B_MOUSE Vacuolar protein sorting-associated protein 26B OS=Mus musculus
GN=Vps26b PE=1 SV=1
Length = 336
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++I +++ E+ G + E I ++ DG R
Sbjct: 181 SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVR 240
Query: 284 NMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
++PI + L PT+ + FSV + +++V+
Sbjct: 241 GESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVL 276
>sp|Q99KN1|ARRD1_MOUSE Arrestin domain-containing protein 1 OS=Mus musculus GN=Arrdc1 PE=2
SV=2
Length = 434
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 9/102 (8%)
Query: 39 EIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGG-SAGVVESLYG 97
EI+LS+ +Y P EPL G + ++ + + I +T GS + + A VVE Y
Sbjct: 8 EIRLSQGRVVYGPGEPLAGTVHLRLGAPLPFRAIRVTCMGSCGVSTKANDGAWVVEESY- 66
Query: 98 VIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLE 139
S + G + +G PF L + E
Sbjct: 67 -------FNSSLSLADKGSLPAGEHNFPFQFLLPATAPTSFE 101
>sp|Q6DH23|V26BL_DANRE Vacuolar protein sorting-associated protein 26B-like OS=Danio rerio
GN=vps26bl PE=2 SV=1
Length = 329
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++I +++ E+ G + E I ++ DG R
Sbjct: 181 SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVR 240
Query: 284 NMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
++PI + L PT+ + FSV + +++V+
Sbjct: 241 GESIPIRLFLAGYEMTPTMRDINKKFSVRYYLNLVL 276
>sp|Q7ZV03|VP26B_DANRE Vacuolar protein sorting-associated protein 26B OS=Danio rerio
GN=vps26b PE=2 SV=1
Length = 331
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 108/272 (39%), Gaps = 43/272 (15%)
Query: 69 HYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSM 128
HYGI + G L G+ SL +K L + E+ S T + F+
Sbjct: 63 HYGIKIEFVGQIELYYDRGNHHEFVSL------VKDLARPGELSQSQ-----TFDFEFT- 110
Query: 129 NLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERP 188
++E+ YE++ G ++ ++Y + I R +S ++ +V+T L P
Sbjct: 111 --------HVEKPYESYTGQNVKLRYFLRATISRRL--NDISKEMDIVVQT----LCTYP 156
Query: 189 VSPEMVVFYITQDTQRHPLLPELKSGGFKVTGKMSTQCSLLDPITGELTVEASSVPIHSI 248
+ + + H KS + L D I G++ + I +
Sbjct: 157 EINSSIKMEVGIEDCLHIEFEYNKS-----------KYHLRDVIVGKIYFLLVRIKIKHM 205
Query: 249 DIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTV--LAGP 306
+I +++ E+ G + E I ++ DG R ++PI + L PT+ +
Sbjct: 206 EIDIIKRETTGTGPSVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYEMTPTMRDINKK 265
Query: 307 FSVEFKVSVVISFRSELSKLHKKSDPTTPRLW 338
FSV + +++V+ E + K+ + T LW
Sbjct: 266 FSVRYYLNLVL-IDEEERRYFKQQEIT---LW 293
>sp|Q4G0F5|VP26B_HUMAN Vacuolar protein sorting-associated protein 26B OS=Homo sapiens
GN=VPS26B PE=1 SV=2
Length = 336
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++I +++ E+ G + E I ++ DG R
Sbjct: 181 SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVR 240
Query: 284 NMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
++PI + L PT+ + FSV + +++V+
Sbjct: 241 GESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVL 276
>sp|Q5R436|VP26B_PONAB Vacuolar protein sorting-associated protein 26B OS=Pongo abelii
GN=VPS26B PE=2 SV=1
Length = 336
Score = 35.0 bits (79), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++I +++ E+ G + E I ++ DG R
Sbjct: 181 SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENVTIAKYEIMDGAPVR 240
Query: 284 NMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
++PI + L PT+ + FSV + +++V+
Sbjct: 241 GESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVL 276
>sp|Q10243|VPS26_SCHPO Vacuolar protein sorting-associated protein 26
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps26 PE=3 SV=1
Length = 298
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 223 STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVC 282
+ L D I G++ + + +++ ++R E+I S + I Q+ DG+
Sbjct: 178 KNKYHLKDVIIGKIYFILVRIKVQRMEVSIIRRETIGTSPNQYSNSETITRFQIMDGNPN 237
Query: 283 RNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
R T+P+ + L PT + FSV + +S+++
Sbjct: 238 RGETIPLRMFLNGYALTPTFRDVNKKFSVRYYLSLIL 274
>sp|Q9W552|VPS26_DROME Vacuolar protein sorting-associated protein 26 OS=Drosophila
melanogaster GN=Vps26 PE=2 SV=1
Length = 478
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 224 TQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCR 283
++ L D I G++ + I ++I +++ ES G + +E I ++ DG +
Sbjct: 180 SKYHLRDTIIGKIYFLLVRIKIKHMEIAIIKKESTGTGPTMFNENETIAKYEIMDGAPVK 239
Query: 284 NMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI-------SFRSELSKLHKKSD 331
++PI V L PT+ + FSV++ +++V+ F+ + L +K+D
Sbjct: 240 GESIPIRVFLAGYNLTPTMRDINKKFSVKYFLNLVLMDTEDRRYFKQQEITLWRKAD 296
>sp|Q8N5I2|ARRD1_HUMAN Arrestin domain-containing protein 1 OS=Homo sapiens GN=ARRDC1 PE=2
SV=1
Length = 433
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 39 EIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGG-SAGVVESLYG 97
EI LS +Y P EPL G + ++ + + I +T GS + + +A VVE Y
Sbjct: 8 EISLSHGRVVYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVSNKANDTAWVVEEGY- 66
Query: 98 VIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLE 139
S + G + +G PF L + E
Sbjct: 67 -------FNSSLSLADKGSLPAGEHSFPFQFLLPATAPTSFE 101
>sp|Q9SP07|1433_LILLO 14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 151 NIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPE 210
N ++ + RG + LS + I++ + L+ +PE VFY+ H L E
Sbjct: 81 NEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAE 140
Query: 211 LKSGGFKVTGKMSTQCSLLDPITGELTVEASSVPIHSIDIHL 252
KSG + K + + +LL + + A P H I + L
Sbjct: 141 FKSGAER---KEAAESTLLAYKSAQDIALAELAPTHPIRLGL 179
>sp|P40336|VP26A_MOUSE Vacuolar protein sorting-associated protein 26A OS=Mus musculus
GN=Vps26a PE=2 SV=1
Length = 327
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 223 STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVC 282
++ L D I G++ + I +++ L++ E +G +ET I ++ DG
Sbjct: 182 KSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPV 241
Query: 283 RNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
+ ++PI + L PT+ + FSV + +++V+
Sbjct: 242 KGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVL 278
>sp|Q0VD53|VP26A_BOVIN Vacuolar protein sorting-associated protein 26A OS=Bos taurus
GN=VPS26A PE=2 SV=1
Length = 327
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 223 STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVC 282
++ L D I G++ + I +++ L++ E +G +ET I ++ DG
Sbjct: 182 KSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPV 241
Query: 283 RNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
+ ++PI + L PT+ + FSV + +++V+
Sbjct: 242 KGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVL 278
>sp|O75436|VP26A_HUMAN Vacuolar protein sorting-associated protein 26A OS=Homo sapiens
GN=VPS26A PE=1 SV=2
Length = 327
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 223 STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVC 282
++ L D I G++ + I +++ L++ E +G +ET I ++ DG
Sbjct: 182 KSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPV 241
Query: 283 RNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
+ ++PI + L PT+ + FSV + +++V+
Sbjct: 242 KGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVL 278
>sp|Q6AY86|VP26A_RAT Vacuolar protein sorting-associated protein 26A OS=Rattus
norvegicus GN=Vps26a PE=2 SV=1
Length = 327
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 223 STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVC 282
++ L D I G++ + I +++ L++ E +G +ET I ++ DG
Sbjct: 182 KSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPV 241
Query: 283 RNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
+ ++PI + L PT+ + FSV + +++V+
Sbjct: 242 KGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVL 278
>sp|P22543|VPS34_YEAST Phosphatidylinositol 3-kinase VPS34 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VPS34 PE=1 SV=1
Length = 875
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 252 LLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIY 290
+L E +L+G + + LI + QV D + RN+TLPIY
Sbjct: 38 ILNPELMLIGSNVFPSSDLIVSLQVFDKERNRNLTLPIY 76
>sp|I0CME7|HYAL_CONCN Hyaluronidase conohyal-Cn1 OS=Conus consors PE=1 SV=1
Length = 448
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 51 PSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIK 103
P+ P+ ++ ++ +IFHY HL + S L + G+AGVV L+G K K
Sbjct: 288 PNTPIYPYVMFQTMDNIFHYEDHLKI--SLGLSAKMGAAGVV--LWGTSKHYK 336
>sp|Q6TNP8|VP26A_DANRE Vacuolar protein sorting-associated protein 26A OS=Danio rerio
GN=vps26a PE=2 SV=1
Length = 327
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 223 STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVC 282
++ L D I G++ + I +++ L++ E +G +ET + ++ DG
Sbjct: 182 KSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEMTGIGPSTTTETETVAKYEIMDGAPV 241
Query: 283 RNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
+ ++PI + L PT+ + FSV + +++V+
Sbjct: 242 KGESIPIRLFLAGYDLTPTMRDVNKKFSVRYFLNLVL 278
>sp|Q6DFU4|V26AB_XENLA Vacuolar protein sorting-associated protein 26A-B OS=Xenopus laevis
GN=vps26a-b PE=2 SV=1
Length = 326
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 137 NLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVF 196
+E+ YE+++GA++ ++Y + V I+R L + IV L P +
Sbjct: 113 QVEKPYESYNGANVRLRYFLKVTIVRRLT--DLVKEYDLIVHQ----LASYPDVNNSIKM 166
Query: 197 YITQDTQRHPLLPELKSGGFKVTGKMSTQCSLLDPITGELTVEASSVPIHSIDIHLLRME 256
+ + H KS + L D I G++ + I +++ L++ E
Sbjct: 167 EVGIEDCLHIEFEYNKS-----------KYHLKDVIVGKIYFLLVRIKIQHMELQLIKKE 215
Query: 257 SILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVS 314
+G +ET + ++ DG + ++PI + + PT+ + FSV + ++
Sbjct: 216 ITGIGPSTTTETETVAKYEIMDGAPVKGESIPIRLFIAGYDPTPTMRDVNKKFSVRYFLN 275
Query: 315 VVI 317
+V+
Sbjct: 276 LVL 278
>sp|Q28HT6|VP26A_XENTR Vacuolar protein sorting-associated protein 26A OS=Xenopus
tropicalis GN=vps26a PE=2 SV=1
Length = 326
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 223 STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVC 282
++ L D I G++ + I +++ L++ E +G +ET + ++ DG
Sbjct: 182 KSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETVAKYEIMDGAPV 241
Query: 283 RNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
+ ++PI + L PT+ + FSV + +++V+
Sbjct: 242 KGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVL 278
>sp|Q6IRD0|V26AA_XENLA Vacuolar protein sorting-associated protein 26A-A OS=Xenopus laevis
GN=vps26a-a PE=2 SV=1
Length = 326
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 223 STQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVC 282
++ L D I G++ + I +++ L++ E +G +ET + ++ DG
Sbjct: 182 KSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETVAKYEIMDGAPV 241
Query: 283 RNMTLPIYVILPRLLTCPTV--LAGPFSVEFKVSVVI 317
+ ++PI + + PT+ + FSV + +++V+
Sbjct: 242 KGESIPIRLFIAGYDPTPTMRDVNKKFSVRYFLNLVL 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,356,054
Number of Sequences: 539616
Number of extensions: 4846250
Number of successful extensions: 11053
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 11018
Number of HSP's gapped (non-prelim): 57
length of query: 352
length of database: 191,569,459
effective HSP length: 118
effective length of query: 234
effective length of database: 127,894,771
effective search space: 29927376414
effective search space used: 29927376414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)