Query 018667
Match_columns 352
No_of_seqs 156 out of 409
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 04:12:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018667hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r51_A Vacuolar protein sortin 100.0 4.3E-64 1.5E-68 489.3 37.2 275 23-351 12-299 (340)
2 2fau_A Vacuolar protein sortin 100.0 3.6E-64 1.2E-68 489.8 36.4 277 22-351 11-299 (341)
3 1g4m_A Beta-arrestin1; sensory 99.9 1.5E-19 5.2E-24 179.4 27.0 280 37-350 17-353 (393)
4 1suj_A CONE arrestin; sensory 99.8 2.3E-17 7.9E-22 163.0 23.8 275 38-351 17-351 (392)
5 3ugu_A S-arrestin; arrestin fo 99.3 1.3E-09 4.4E-14 106.6 27.9 182 120-320 122-346 (380)
6 2fau_A Vacuolar protein sortin 97.2 0.0047 1.6E-07 59.9 13.4 132 24-180 165-299 (341)
7 2r51_A Vacuolar protein sortin 97.2 0.009 3.1E-07 57.9 15.2 133 24-180 165-299 (340)
8 1g4m_A Beta-arrestin1; sensory 97.1 0.012 4E-07 58.1 15.2 133 31-181 192-355 (393)
9 1suj_A CONE arrestin; sensory 96.7 0.029 1E-06 55.3 14.8 132 31-180 189-351 (392)
10 2p9r_A Alpha-2-M, alpha-2-macr 91.7 1.1 3.8E-05 34.8 9.2 25 37-63 3-27 (102)
11 3ugu_A S-arrestin; arrestin fo 89.0 8.7 0.0003 37.5 14.4 45 37-83 214-258 (380)
12 2hr0_A Complement C3 beta chai 88.9 13 0.00045 38.1 16.8 25 37-63 107-131 (645)
13 4fxk_A Complement C4 beta chai 85.4 14 0.00047 37.6 14.5 141 37-240 121-265 (656)
14 2pn5_A TEP1R, thioester-contai 83.8 26 0.0009 39.1 16.9 26 37-64 101-126 (1325)
15 3hrz_A Cobra venom factor; ser 82.2 27 0.00094 35.9 15.2 25 37-63 105-129 (627)
16 3prx_B Cobra venom factor; imm 76.8 34 0.0012 39.5 14.9 83 124-240 182-265 (1642)
17 2b39_A C3; thioester, immune d 62.2 59 0.002 37.4 12.8 25 37-63 128-152 (1661)
18 3coo_A Spondin-1; reelin-N dom 59.4 4.1 0.00014 35.6 2.1 60 18-79 11-78 (180)
19 4acq_A Alpha-2-macroglobulin; 58.9 1.2E+02 0.0042 34.4 14.6 24 37-62 105-128 (1451)
20 3cu7_A Complement C5; Mg domai 52.8 87 0.003 36.0 12.2 25 37-63 125-149 (1676)
21 3eo6_A Protein of unknown func 37.3 1.6E+02 0.0053 23.5 9.4 70 44-133 15-89 (106)
22 2zou_A Spondin-1; beta-sandwic 33.6 66 0.0023 26.7 5.6 46 32-79 18-63 (149)
23 2cu9_A Spcia1, histone chapero 26.4 54 0.0019 28.1 3.7 42 115-161 63-119 (161)
24 2oyz_A UPF0345 protein VPA0057 22.4 1.9E+02 0.0066 22.4 5.9 66 47-133 6-76 (94)
No 1
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=100.00 E-value=4.3e-64 Score=489.33 Aligned_cols=275 Identities=18% Similarity=0.309 Sum_probs=244.6
Q ss_pred eeEEEEEeecCCce--EEEEEEcCC----CCCcCCCCcEEEEEEEEeC---CeEEEeEEEEEEEEEEEEEEecCccceEE
Q 018667 23 RAFVLKLKLQIDMS--TVEIKLSRS----NRIYRPSEPLQGKIVIKSS---SSIFHYGIHLTVNGSANLQVRGGSAGVVE 93 (352)
Q Consensus 23 ~~~~~~~k~~~~m~--~~~I~fd~~----~~vY~~Ge~VsG~V~i~~~---k~~~h~gI~i~~~G~a~~~ws~~s~g~~e 93 (352)
.+|.+++.|+.+.+ .++++.++. .++|++||+|+|+|.|+.. ++++|+||+|++.|++.+.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvY~~GE~VsG~V~I~~~~~~k~l~h~GIki~~~G~~e~~~--------- 82 (340)
T 2r51_A 12 QSVEVEILLNDAESRKRAEHKTEDGKKEKYFLFYDGETVSGKVSLSLKNPNKRLEHQGIKIEFIGQIELYY--------- 82 (340)
T ss_dssp -CEEEEEEETTTTTSCEEEEECTTSCEEEEEEEETBCCEEEEEEEEESSTTSCEEESCEEEEEEEEEEEGG---------
T ss_pred CCceEEEEECCCCccceEEeecCCCcEeecCcCCCCCEEEEEEEEEECCCCCeeEEEEEEEEEEEEEEEEe---------
Confidence 58999999998766 566666542 3499999999999999988 99999999999999965544
Q ss_pred EeecceeeEEEEeeeEEeeCCeeeCCCceEEeeEEEcCCCCCccccccccceEEeeEEEEEEEEEEEEecccCCCcceEE
Q 018667 94 SLYGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATV 173 (352)
Q Consensus 94 ~~~~~~~~~~~~~~~~~l~~~G~L~~G~~~fpF~F~Lp~~~~~~~~~l~eSy~G~~g~IrY~vkv~I~Rp~~~~d~~~~~ 173 (352)
++.++++|++...+|+++|+|++|+| |||+|+||.. +||||+|+||+|||+|||+|+|||+ |+++++
T Consensus 83 ---~~~~~~~f~~~~~eL~~pG~L~~G~~-fpF~F~lp~~-------l~eSy~G~~g~IrY~vkv~i~Rp~~--di~~~~ 149 (340)
T 2r51_A 83 ---DRGNHHEFVSLVKDLARPGEITQSQA-FDFEFTHVEK-------PYESYTGQNVKLRYFLRATISRRLN--DVVKEM 149 (340)
T ss_dssp ---GTTCCEEEEEEEEEEECSEEECSCEE-EEEEECSBCC-------CSCCEECSSEEEEEEEEEEECCSSC--CEEEEE
T ss_pred ---cCCCcEEEEEEEEEecCCCccCCCcE-EeeEeCCCCC-------CCcCeEeeeEEEEEEEEEEEEecCC--CceEEE
Confidence 45577899999999999999999999 9999999854 9999999999999999999999996 899999
Q ss_pred EEEEEEcCccccCCCCCCceEEEEecccccccccCCCccccc-eEEEEEEeee-EeCCCceEEEEEEEEeccCeEEEEEE
Q 018667 174 EFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPELKSGG-FKVTGKMSTQ-CSLLDPITGELTVEASSVPIHSIDIH 251 (352)
Q Consensus 174 eF~V~~~~~~l~~~~~~p~pv~f~it~~~l~~~~~~~~~~~~-f~I~~~~~~~-~~~~d~i~G~i~~~~s~~~Ik~ielq 251 (352)
+|+|++... .|.. +.+++|+. ..++ |+|++++++. |+++|+|+|+++|++|+++|++||++
T Consensus 150 eF~V~~~~~-------~p~~------~~pIk~Ev----gi~~cl~Ie~~~~ks~y~lgd~I~G~I~f~~s~i~Ik~iel~ 212 (340)
T 2r51_A 150 DIVVHTLST-------YPEL------NSSIKMEV----GIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEID 212 (340)
T ss_dssp EEEEECCCC-------CCCC------CCCEEEEE----EETTTEEEEEEESCSEEETTCEEEEEEEEEEECSCEEEEEEE
T ss_pred EEEEEeCCC-------CCcc------CCCEeccc----cCCceEEEEEEECcccccCCCeEEEEEEEEEeeceeEEEEEE
Confidence 999987531 1221 23345553 2344 9999999988 99999999999999999999999999
Q ss_pred EEEEEEEecCCceeEeeeEEEEEEEEeCccccCeeEeEEEEcCCCCCCCccc--cCceEEEEEEEEEEEEcCCccccccC
Q 018667 252 LLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTVL--AGPFSVEFKVSVVISFRSELSKLHKK 329 (352)
Q Consensus 252 Lir~Et~~~~~~~~~e~t~I~~~eI~dG~p~rg~~IPi~~~lp~l~~~PT~~--~~~FsV~y~Lnlvvi~e~~~~~~~~~ 329 (352)
|+|+|||+++.++.+|+++|+++|||||+|+||++|||||+||++++|||+. |++|||+|+|||+++|++|
T Consensus 213 LiR~Et~~~~~~~~~e~~~i~k~eImdG~p~rge~IPirl~Lp~~~l~PT~~~~~~~fsV~Y~Lnlvl~~e~~------- 285 (340)
T 2r51_A 213 IIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVLIDEEE------- 285 (340)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEESCCCTTCEEEEEEEGGGSCCCCCEEEETTTEEEEEEEEEEEEETTC-------
T ss_pred EEEEEEEecCCCeeEEEEEEEEEEEecCCccCCCEEEEEEECCCCCCCCCccccCCeEEEEEEEEEEEEeCCC-------
Confidence 9999999999999999999999999999999999999999999999999996 9999999999999999999
Q ss_pred CCCCCcceeEEEeeecEEEEec
Q 018667 330 SDPTTPRLWLAMETLPLELVRT 351 (352)
Q Consensus 330 ~~~~~~~~~~~t~~~pi~l~r~ 351 (352)
+.+++++||+|||.
T Consensus 286 --------~~~~kq~pI~L~R~ 299 (340)
T 2r51_A 286 --------RRYFKQQEVVLWRK 299 (340)
T ss_dssp --------CEEEEEEEEEEECC
T ss_pred --------cEEEEEeeEEEEEC
Confidence 89999999999996
No 2
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-64 Score=489.81 Aligned_cols=277 Identities=19% Similarity=0.316 Sum_probs=240.3
Q ss_pred eeeEEEEEeecCCce--EEEEEEcCC----CCCcCCCCcEEEEEEEEeCC---eEEEeEEEEEEEEEEEEEEecCccceE
Q 018667 22 LRAFVLKLKLQIDMS--TVEIKLSRS----NRIYRPSEPLQGKIVIKSSS---SIFHYGIHLTVNGSANLQVRGGSAGVV 92 (352)
Q Consensus 22 ~~~~~~~~k~~~~m~--~~~I~fd~~----~~vY~~Ge~VsG~V~i~~~k---~~~h~gI~i~~~G~a~~~ws~~s~g~~ 92 (352)
-.+|.+++.|+++.+ .++++.++. .++|++||+|+|+|+|+..+ +++|+||+|++.|++.+.|
T Consensus 11 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~vY~~GE~VsG~V~I~~~~~gk~l~h~GIki~~~G~~e~~~-------- 82 (341)
T 2fau_A 11 GPIXEIDIVLNDGETRKMAEMKTEDGKVEKHYLFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELFN-------- 82 (341)
T ss_dssp TTTEEEEEEETTGGGSCEEEEECTTSCEEEEEEECTTCCEEEEEEEEESSSSCCEEESCEEEEEEEEEEECS--------
T ss_pred CCCceEEEEECCCCccceEEeecCCCceeccCcCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEEEEEEEe--------
Confidence 348999999999776 666666652 45999999999999999765 9999999999999965544
Q ss_pred EEeecceeeEEEEeeeEEeeCCeeeCCCceEEeeEEEcCCCCCccccccccceEEeeEEEEEEEEEEEEecccCCCcceE
Q 018667 93 ESLYGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSAT 172 (352)
Q Consensus 93 e~~~~~~~~~~~~~~~~~l~~~G~L~~G~~~fpF~F~Lp~~~~~~~~~l~eSy~G~~g~IrY~vkv~I~Rp~~~~d~~~~ 172 (352)
++.++++|++.+.+|+++|+|++| |+|||+|++|+ ++||||+|+||+|||+|||+|+|||+ |++++
T Consensus 83 ----~~~~~~~fls~~~eL~~~G~L~~g-~~fpF~F~~~~-------~~~eSy~G~~~~IrY~vrv~i~R~~~--di~~~ 148 (341)
T 2fau_A 83 ----DKSNTHEFVNLVKELALPGELTQS-RSYDFEFMQVE-------KPYESYIGANVRLRYFLKVTIVRRLT--DLVKE 148 (341)
T ss_dssp ----TTCCEEEEEEEEEEEECSEEECSC-EEEEEEECSCC-------CCSCCEECSSEEEEEEEEEEECCSSS--CEEEE
T ss_pred ----cCCCcEEEEEEEEEEcCCCccCCC-cEEeeEeCCCC-------CCCcceEeeEEEEEEEEEEEEEecCc--ceeEE
Confidence 556788999999999999999999 99999999764 39999999999999999999999995 89999
Q ss_pred EEEEEEEcCccccCCCCCCceEEEEecccccccccCCCccccceEEEEEEeee-EeCCCceEEEEEEEEeccCeEEEEEE
Q 018667 173 VEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPELKSGGFKVTGKMSTQ-CSLLDPITGELTVEASSVPIHSIDIH 251 (352)
Q Consensus 173 ~eF~V~~~~~~l~~~~~~p~pv~f~it~~~l~~~~~~~~~~~~f~I~~~~~~~-~~~~d~i~G~i~~~~s~~~Ik~ielq 251 (352)
++|||++... .+..+.|+.|+++++ ..++|++++++. |+++|+|+|+++|++|+++|++||++
T Consensus 149 ~eF~V~~~~~----~p~~~~pi~~evgie------------d~L~ieF~~~ks~y~l~d~I~G~I~f~~s~i~Ik~iel~ 212 (341)
T 2fau_A 149 YDLIVHQLAT----YPDVNNSIKMEVGIE------------DXLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQ 212 (341)
T ss_dssp EEEEECCCBC----CCCCCCCEEEEEEET------------TTEEEEEEESCSEEETTCEEEEEEEEEEECSCEEEEEEE
T ss_pred EEEEEEeCCC----CCCCCCCeEEEEecc------------ccEEEEEEEccccccCCCeEEEEEEEEEeccceEEEEEE
Confidence 9999987532 223346777766641 235677888887 99999999999999999999999999
Q ss_pred EEEEEEEecCCceeEeeeEEEEEEEEeCccccCeeEeEEEEcCCCCCCCccc--cCceEEEEEEEEEEEEcCCccccccC
Q 018667 252 LLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTVL--AGPFSVEFKVSVVISFRSELSKLHKK 329 (352)
Q Consensus 252 Lir~Et~~~~~~~~~e~t~I~~~eI~dG~p~rg~~IPi~~~lp~l~~~PT~~--~~~FsV~y~Lnlvvi~e~~~~~~~~~ 329 (352)
|+|+|||+++.++.+|+++|+++|||||+|+||++|||||+||++++|||+. +++|||+|+|||+++|++|
T Consensus 213 LiR~Et~~~~~~~~~e~~~i~k~eImDG~p~rge~IPirl~Lp~~~l~PT~~~~~~~fsV~Y~Lnlvlvde~~------- 285 (341)
T 2fau_A 213 LIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEED------- 285 (341)
T ss_dssp EEEEEEESCGGGCEEEEEEEEEEECCCC------CEEEEEESTTTCCCCCEEEEETTEEEEEEEEEEEEETTC-------
T ss_pred EEEEEEEcCCCCeeeEEEEEEEEEEeCCCccCCCEEEEEEEcCCCCCCCcchhcCCeEEEEEEEEEEEEeCCC-------
Confidence 9999999999999999999999999999999999999999999999999996 9999999999999999999
Q ss_pred CCCCCcceeEEEeeecEEEEec
Q 018667 330 SDPTTPRLWLAMETLPLELVRT 351 (352)
Q Consensus 330 ~~~~~~~~~~~t~~~pi~l~r~ 351 (352)
+|||+++| |+|||.
T Consensus 286 -----rryfk~~E---I~L~R~ 299 (341)
T 2fau_A 286 -----RRYFKQQE---IILWRK 299 (341)
T ss_dssp -----CEEEEEEE---EEEECB
T ss_pred -----CeeeeeeE---EEEEEC
Confidence 99999999 999996
No 3
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=99.86 E-value=1.5e-19 Score=179.44 Aligned_cols=280 Identities=13% Similarity=0.133 Sum_probs=175.0
Q ss_pred EEEEEEcCCC--CCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEEEe-cCccceEEEeecceeeEEEEeeeEEeeC
Q 018667 37 TVEIKLSRSN--RIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVR-GGSAGVVESLYGVIKPIKILKKSQEIRT 113 (352)
Q Consensus 37 ~~~I~fd~~~--~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ws-~~s~g~~e~~~~~~~~~~~~~~~~~l~~ 113 (352)
.+.|.|.+.+ ..+..||.|+|.|.|+.. .++.+.|.+++.+...-.+. .+..|. .| .+ ..|+....-+.+
T Consensus 17 ~i~~yl~krdfvd~~~~~d~V~GvV~id~~-~lk~r~v~v~l~~~frygr~~~~v~g~--~f---~k-e~~~~~~~v~p~ 89 (393)
T 1g4m_A 17 KLTVYLGKRDFVDHIDLVEPVDGVVLVDPE-YLKERRVYVTLTCAFRYGREDLDVLGL--TF---RK-DLFVANVQSFPP 89 (393)
T ss_dssp SCEEEESCSEEEECSSCBCCEEEEEECCHH-HHTTCEEEEEEEEEEEESCTTCCCTTT--CE---EE-EEEEEEEEEESC
T ss_pred eEEEEeCCceEEEecCCCCEEEEEEEEehh-HhcccEEEEEEEEEEEecCCcceeccc--cc---ce-eEEEEEEEEeCC
Confidence 4788887654 246789999999999977 99999998777764221111 011121 01 01 111221112222
Q ss_pred Ce--eeC-----------CCceEEeeEEEcCCCCCccccccccceE--------EeeEEEEEEEEEEEEecccCCCcceE
Q 018667 114 SG--RIG-----------SGTTEVPFSMNLKQHGEENLERFYETFH--------GADINIQYLVTVDIMRGYLHKSLSAT 172 (352)
Q Consensus 114 ~G--~L~-----------~G~~~fpF~F~Lp~~~~~~~~~l~eSy~--------G~~g~IrY~vkv~I~Rp~~~~d~~~~ 172 (352)
+| ..+ +|.|.|||+|+||++ +|+||+ |.+|+|||.|+|.++||+. +...+
T Consensus 90 ~~~~~~~lt~lqe~l~~~~G~h~fPF~f~LP~~-------lPsSfelq~~~~d~G~~g~IrY~Vka~i~~~~~--~k~~K 160 (393)
T 1g4m_A 90 APEDKKPLTRLQERLIKKLGEHAYPFTFEIPPN-------LPCSVTLQPGPEDTGKACGVDYEVKAFCAENLE--EKIHK 160 (393)
T ss_dssp STTSCCCCCHHHHHHHHHSCTTEEEEEECCCTT-------SCCCEEEECCGGGGGGCEEEEEEEEEEEESSTT--SCCCG
T ss_pred CCcccCccchhhhhhhccCCceEEEEEeeCCCC-------CCceEEEccccccCCCcEEEEEEEEEEEcCCcc--cccce
Confidence 33 233 999999999999976 899999 9999999999999999953 33333
Q ss_pred EEEEEEEcCccccCCCCCCceEEEEecccccccccCCCccccceEEEEEEeee-EeCCCceEEEEEEE-EeccCeEEEEE
Q 018667 173 VEFIVETDKADLLERPVSPEMVVFYITQDTQRHPLLPELKSGGFKVTGKMSTQ-CSLLDPITGELTVE-ASSVPIHSIDI 250 (352)
Q Consensus 173 ~eF~V~~~~~~l~~~~~~p~pv~f~it~~~l~~~~~~~~~~~~f~I~~~~~~~-~~~~d~i~G~i~~~-~s~~~Ik~iel 250 (352)
+.|++... .+++..+....+ +...+.....-++.+++++++.+++. +..+|.|.-.+.+. .|+..|+.|++
T Consensus 161 ~~~v~l~i-~~l~~~p~~~~~------~~~~e~~k~fc~~sG~l~l~~sldk~~Y~pGE~I~v~v~I~N~S~k~Vk~Ikv 233 (393)
T 1g4m_A 161 RNSVRLVI-RKVQYAPERPGP------QPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKI 233 (393)
T ss_dssp GGEEEEEE-EEEECCCCCCSS------CCCCEEEEECBSSSSCEEEEEEESCSEEETTCCEEEEEEEEECSSCCEEEEEE
T ss_pred EEEEEEec-cccccCchhhcC------CCceEEEEEEEEcCCCEEEEEEECCceEcCCCEEEEEEEEEcCCCCEEeEEEE
Confidence 44443321 112211111000 00001111112468899999999998 99999999999999 58899999999
Q ss_pred EEEEEEEEe-cCCceeEeeeEEEEEEEEeCccccCeeEeEEEEcCCCCCCC-----------------cc--ccCceE--
Q 018667 251 HLLRMESIL-LGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCP-----------------TV--LAGPFS-- 308 (352)
Q Consensus 251 qLir~Et~~-~~~~~~~e~t~I~~~eI~dG~p~rg~~IPi~~~lp~l~~~P-----------------T~--~~~~Fs-- 308 (352)
.|++..++- -+.+.. ..+|...+..+ .+.+|.+.-..+.|+++ +.| |. .|.+++
T Consensus 234 ~L~Q~~~~~~~s~~~~--k~~Va~~e~~~-~V~~gs~~~~~~~L~P~-l~p~~~~~~~aldg~lk~~dt~l~ss~ii~~~ 309 (393)
T 1g4m_A 234 SVRQYADICLFNTAQY--KCPVAMEEADD-TVAPSSTFCKVYTLTPF-LANNREKRGLALDGKLKHEDTNLASSTLLREG 309 (393)
T ss_dssp EEEEEEEECSSBCEEE--EEEEEEEEECC-CBCTTEEEEEEEEECCC-GGGTTTCSSEEESSCTTSTTCCBCCCCCCCTT
T ss_pred EEEEEEEEEEecCCce--EEEEEEEecCC-cCCCCCEEeeEEEEcCC-CCCcccccceeeccccccCCcccccceeecCC
Confidence 999998542 122222 24555555444 56678876666666554 244 43 678888
Q ss_pred ---------EEEEEEEEEEEcCCccccccCCCCCCcceeEEEeeecEEEEe
Q 018667 309 ---------VEFKVSVVISFRSELSKLHKKSDPTTPRLWLAMETLPLELVR 350 (352)
Q Consensus 309 ---------V~y~Lnlvvi~e~~~~~~~~~~~~~~~~~~~~t~~~pi~l~r 350 (352)
|+|+|.+.+....|.-.+. -.+ --+.-.+||.|..
T Consensus 310 ~~~~~~gi~VsY~vkV~l~v~~gg~~~~----~~~---~~l~~~lPi~i~~ 353 (393)
T 1g4m_A 310 ANREILGIIVSYKVKVKLVVSRGGLLGD----LAS---SDVAVELPFTLMH 353 (393)
T ss_dssp CCSGGGSEEEEEEEEEEEEECCC---------------CEEEEEEEEEEEC
T ss_pred CCccccceEEEEEEEEEEEecCCCcccc----ccc---ccEEEEeCEEEec
Confidence 9999999999876500000 000 1456678998864
No 4
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=99.78 E-value=2.3e-17 Score=163.02 Aligned_cols=275 Identities=14% Similarity=0.177 Sum_probs=166.1
Q ss_pred EEEEEcCCC--CCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEEEecC---ccceEEEeecceeeEEEEeeeEEee
Q 018667 38 VEIKLSRSN--RIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGG---SAGVVESLYGVIKPIKILKKSQEIR 112 (352)
Q Consensus 38 ~~I~fd~~~--~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ws~~---s~g~~e~~~~~~~~~~~~~~~~~l~ 112 (352)
+++-+-+-+ .-..-.|.|.|.|.|.... ++.|.|.+.|.+.- ...++ -.|. .+. .+++..+..+-
T Consensus 17 ~t~yl~krd~vd~~~~vd~vdGvV~vd~~~-lk~rkv~~~l~~~f--ryGred~~v~Gl---~f~----kel~~~~~qv~ 86 (392)
T 1suj_A 17 LSIYLGKRDFVDHVEHVEPVDGVVLIDPEY-LKDRKVFVTLTCAF--RYGRDDLDLIGM---SFR----KDLYSLATQVY 86 (392)
T ss_dssp EEEEESCSEEEECSSCBCCEEEEEEECTTT-SSSCEEEEEEEEEE--EEECCSSCCSSC---EEE----EEEEEEEEEEE
T ss_pred EEEEECCceEEeecCccCceeeEEEEcHHH-hccceEEEEEEEee--ccCCCchhcCcc---eEE----EEEEEEEEEEe
Confidence 555554421 1245689999999999877 89999999999642 11111 1221 110 12222221211
Q ss_pred C--Ce-ee---------CCCceEEeeEEEcCCCCCccccccccce--------EEeeEEEEEEEEEEEEecccCCCcceE
Q 018667 113 T--SG-RI---------GSGTTEVPFSMNLKQHGEENLERFYETF--------HGADINIQYLVTVDIMRGYLHKSLSAT 172 (352)
Q Consensus 113 ~--~G-~L---------~~G~~~fpF~F~Lp~~~~~~~~~l~eSy--------~G~~g~IrY~vkv~I~Rp~~~~d~~~~ 172 (352)
+ ++ .+ +.|.|.|||+|+||++ +|+|| +|++|+|||.|||.++|||..+.. +
T Consensus 87 p~~~~~~~t~lQe~Ll~~~G~h~fPFsFqLP~~-------lPsSf~lqp~~~~eGk~g~VrY~VKa~i~~~~~dk~~--K 157 (392)
T 1suj_A 87 PPETKEPLTPLQEKLMKKLGAHAYPFCFKMGTN-------LPCSVTLQPGPDDTGKSCGVDFEVKAFCAENLEEKIH--K 157 (392)
T ss_dssp SCCSCCCCCHHHHHHHHHHCSSEEEEEECCCSS-------CCCCEEECCCTTCCSCCEEEEEEEEEEEESCTTSCCC--G
T ss_pred CCCCCccccHHHHHhhhcccCeeEeEEeeCCCC-------CCCeEEeccCCccCCCceeEEEEEEEEEcCChhhccc--e
Confidence 1 22 12 7899999999999987 77777 799999999999999999843222 2
Q ss_pred EEEEEEEcCccccCCCC--CCceEEEEecccccccccCCCccccceEEEEEEeee-EeCCCceEEEEEEE-EeccCeEEE
Q 018667 173 VEFIVETDKADLLERPV--SPEMVVFYITQDTQRHPLLPELKSGGFKVTGKMSTQ-CSLLDPITGELTVE-ASSVPIHSI 248 (352)
Q Consensus 173 ~eF~V~~~~~~l~~~~~--~p~pv~f~it~~~l~~~~~~~~~~~~f~I~~~~~~~-~~~~d~i~G~i~~~-~s~~~Ik~i 248 (352)
+.+++... .+++..+. .+.| ..+......++.++++++..+++. +..+|+|.-.+.+. +|+..|+.|
T Consensus 158 r~tv~l~i-r~l~~~P~~~~~~p--------~~e~~k~f~~ssGpl~l~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~I 228 (392)
T 1suj_A 158 RNSVQLVI-RKVQFAPANLGVAP--------KTEITRQFMLSDRPLHLEASLDKEIYYHGEPINVNVKINNTTGKIVKKI 228 (392)
T ss_dssp GGEEEEEE-EEEECCCSSCCCCC--------CCEEEEEEEETTEEEEEEEEESCSEEETTCCEEEEEEEEECSSSEEEEE
T ss_pred EEEEEEee-eccccCccccCCCC--------eeEEEEEeEecCCCEEEEEEeCCccccCCCEEEEEEEEECCCCCcEeEE
Confidence 22221110 11111111 1111 001111112457889999999998 89999999999999 588999999
Q ss_pred EEEEEEEEEEec--CCceeEeeeEEEEEEEEeCccccCeeEeEEEEcCCCCCC----------------Ccc--ccCc--
Q 018667 249 DIHLLRMESILL--GEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTC----------------PTV--LAGP-- 306 (352)
Q Consensus 249 elqLir~Et~~~--~~~~~~e~t~I~~~eI~dG~p~rg~~IPi~~~lp~l~~~----------------PT~--~~~~-- 306 (352)
++.|++.-++-. +..+ ...+...+- ++.+.+|.+.-..+.|.++... ||. .+.+
T Consensus 229 kv~L~Q~~~v~l~s~~~~---k~~Va~~e~-~e~V~pgst~~k~~~L~P~l~~n~~k~glaldg~lk~~dTnLassti~~ 304 (392)
T 1suj_A 229 KIIVEQVTDVVLFSLDKY---VKTVCAEET-NDTVAANSTLSKTFSVTPMLANNREKRGLALDGKLKHEDTNLASTTVIR 304 (392)
T ss_dssp EEEEEEEEEECSSSCCEE---EEEEEEEEC-CCCBCTTEEEEEEEEECCCGGGCSCCTTCCBSSCTTBSSCCBCCCCCCC
T ss_pred EEEEEEEEEEEEecCCcE---EEEEEEEec-CCCcCCCCEEEEEEEEeccccCCCccceeeecccccCCCcccccccccc
Confidence 999999999752 2222 233443332 3467788885555555443221 333 2222
Q ss_pred ---------eEEEEEEEEEEEEcCCccccccCCCCCCcceeEEEeeecEEEEec
Q 018667 307 ---------FSVEFKVSVVISFRSELSKLHKKSDPTTPRLWLAMETLPLELVRT 351 (352)
Q Consensus 307 ---------FsV~y~Lnlvvi~e~~~~~~~~~~~~~~~~~~~~t~~~pi~l~r~ 351 (352)
+.|+|.|.|.+....| -++- +=.+ --++-.+|+.|.+.
T Consensus 305 ~~~~~~~~gI~VsY~vkVkl~v~~g--g~~~--~~~s---~d~~velPf~L~~p 351 (392)
T 1suj_A 305 PGMDKEVLGILVSYKVKVHLVVARG--GILG--DLTS---SDVAVELPLTLMHP 351 (392)
T ss_dssp TTSCGGGGSEEEEEEEEEEEEEETT--SSTT--CCCC---EEEEEEEEEEEECC
T ss_pred CCCCccccceEEEEEEEEEEEEcCC--cccc--cccc---cCeeEEECeEEeCC
Confidence 7999999999999874 0000 0000 13556688888653
No 5
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=99.32 E-value=1.3e-09 Score=106.55 Aligned_cols=182 Identities=12% Similarity=0.186 Sum_probs=117.8
Q ss_pred CceEEeeEEEcCCCCCccccccccceE--------EeeEEEEEEEEEEEEecc---cCCCcceEEEEEEEEcCccccCCC
Q 018667 120 GTTEVPFSMNLKQHGEENLERFYETFH--------GADINIQYLVTVDIMRGY---LHKSLSATVEFIVETDKADLLERP 188 (352)
Q Consensus 120 G~~~fpF~F~Lp~~~~~~~~~l~eSy~--------G~~g~IrY~vkv~I~Rp~---~~~d~~~~~eF~V~~~~~~l~~~~ 188 (352)
|.|.|||.|+||++ +|+||. |+.+.|+|.|||.+.++| ..+.+....-+.++.. .+.....
T Consensus 122 G~nayPF~f~LP~~-------lPsSv~LQp~p~d~Gk~cgV~YeVKafia~~~~~~~dk~~Kr~sV~L~Irk-lq~aP~~ 193 (380)
T 3ugu_A 122 GANTYPFLLTFPDY-------LPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRK-VQHAPRD 193 (380)
T ss_dssp CTTEEEEEECCCSS-------CCCSEEECCCTTCCSCCEEEEEEEEEEEEBCCSSSSSBCCGGGEEEEEEEE-EEBCCSC
T ss_pred CcCceeEEEeCCCC-------CCCEEEeccCCccCCCccceEEEEEEEEccCcccccccccccceEEEeeee-cccCCcc
Confidence 88999999999987 788885 888999999999999998 3333433333333332 1110111
Q ss_pred CCCceEEEEecccccccccCCCccccceEEEEEEeee-EeCCCceEEEEEEE-EeccCeEEEEEEEEEEEEEecC-Ccee
Q 018667 189 VSPEMVVFYITQDTQRHPLLPELKSGGFKVTGKMSTQ-CSLLDPITGELTVE-ASSVPIHSIDIHLLRMESILLG-EKII 265 (352)
Q Consensus 189 ~~p~pv~f~it~~~l~~~~~~~~~~~~f~I~~~~~~~-~~~~d~i~G~i~~~-~s~~~Ik~ielqLir~Et~~~~-~~~~ 265 (352)
..+.| . .+....-.++.++++++..+++. +..+|+|.-.+.+. +|+..|+.|++.|++..++-.- .++.
T Consensus 194 ~~~~P-~-------~e~~K~F~~ssGpl~L~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~y 265 (380)
T 3ugu_A 194 MGPQP-R-------AEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYY 265 (380)
T ss_dssp CCCCC-E-------EEEEEECTTCCCEEEEEEEESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCEE
T ss_pred cCCCC-c-------ceEEEEeEecCCCEEEEEEeCCccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCeE
Confidence 11222 1 11111122467899999999987 88899999999999 5889999999999999987743 2333
Q ss_pred EeeeEEEEEEEEeCccccCeeEeEEE-EcCCCC------------------C---CCcc-------ccCceEEEEEEEEE
Q 018667 266 SETSLIQTTQVADGDVCRNMTLPIYV-ILPRLL------------------T---CPTV-------LAGPFSVEFKVSVV 316 (352)
Q Consensus 266 ~e~t~I~~~eI~dG~p~rg~~IPi~~-~lp~l~------------------~---~PT~-------~~~~FsV~y~Lnlv 316 (352)
+ ..+...|..| .+..|.+.-=.+ ..|-+. + +-|. ..=-|=|+|.+++-
T Consensus 266 ~--~~Va~~E~~e-pV~pgst~~k~~~l~P~l~~n~~krglALdG~lk~edtnLASsT~~~~~~~ke~~GI~VsY~VkVk 342 (380)
T 3ugu_A 266 I--KTVAAEEAQE-KVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVK 342 (380)
T ss_dssp E--EEEEEEECSC-CBCTTEEEEEEEEECCCGGGCSCCTTSCBSSCTTCTTCCBCCCCCCCTTCCGGGGSEEEEEEEEEE
T ss_pred E--EEEEEeccCC-cCCCCCeEEeeEEEEEecccCCceeeEEecceeccCCCcccceeEecCCCCCcceEEEEEEEEEEE
Confidence 2 3355555333 566776632222 223221 1 1121 22347799999999
Q ss_pred EEEc
Q 018667 317 ISFR 320 (352)
Q Consensus 317 vi~e 320 (352)
++..
T Consensus 343 l~v~ 346 (380)
T 3ugu_A 343 LTVS 346 (380)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9998
No 6
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=97.17 E-value=0.0047 Score=59.90 Aligned_cols=132 Identities=13% Similarity=0.156 Sum_probs=80.0
Q ss_pred eEEEEEeecCCceEEEEEEcCCCCCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEEEecCccceEEEeecceeeEE
Q 018667 24 AFVLKLKLQIDMSTVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIK 103 (352)
Q Consensus 24 ~~~~~~k~~~~m~~~~I~fd~~~~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ws~~s~g~~e~~~~~~~~~~ 103 (352)
+..++.-.++. +.|+|.-+...|.+||.|.|++.+.. ..++++.|.+.+.-...+..... .+. +...
T Consensus 165 pi~~evgied~---L~ieF~~~ks~y~l~d~I~G~I~f~~-s~i~Ik~iel~LiR~Et~~~~~~-------~~~--e~~~ 231 (341)
T 2fau_A 165 SIKMEVGIEDX---LHIEFEYNKSKYHLKDVIVGKIYFLL-VRIKIQHMELQLIKKEITGIGPS-------TTT--ETET 231 (341)
T ss_dssp CEEEEEEETTT---EEEEEEESCSEEETTCEEEEEEEEEE-ECSCEEEEEEEEEEEEEESCGGG-------CEE--EEEE
T ss_pred CeEEEEecccc---EEEEEEEccccccCCCeEEEEEEEEE-eccceEEEEEEEEEEEEEcCCCC-------eee--EEEE
Confidence 44555444342 56666656668999999999999984 34677888888887754422210 000 0001
Q ss_pred EEeeeEEeeCCeeeCCCceEEeeEEEcCCCCCccccccccceE--EeeEEEEEEEEEEE-EecccCCCcceEEEEEEEEc
Q 018667 104 ILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFH--GADINIQYLVTVDI-MRGYLHKSLSATVEFIVETD 180 (352)
Q Consensus 104 ~~~~~~~l~~~G~L~~G~~~fpF~F~Lp~~~~~~~~~l~eSy~--G~~g~IrY~vkv~I-~Rp~~~~d~~~~~eF~V~~~ 180 (352)
+ ...++ -+|.-..|.. +||.+.||.. .+++||. ....+|+|+|.+.+ +..++ -..+..|.+..+.
T Consensus 232 -i-~k~eI-mDG~p~rge~-IPirl~Lp~~------~l~PT~~~~~~~fsV~Y~Lnlvlvde~~r--ryfk~~EI~L~R~ 299 (341)
T 2fau_A 232 -I-AKYEI-MDGAPVKGES-IPIRLFLAGY------DPTPTMRDVNKKFSVRYFLNLVLVDEEDR--RYFKQQEIILWRK 299 (341)
T ss_dssp -E-EEEEC-CCC------C-EEEEEESTTT------CCCCCEEEEETTEEEEEEEEEEEEETTCC--EEEEEEEEEEECB
T ss_pred -E-EEEEE-eCCCccCCCE-EEEEEEcCCC------CCCCcchhcCCeEEEEEEEEEEEEeCCCC--eeeeeeEEEEEEC
Confidence 1 11222 2466566766 9999999853 4889999 78899999999999 44432 1334566666553
No 7
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=97.16 E-value=0.009 Score=57.89 Aligned_cols=133 Identities=12% Similarity=0.193 Sum_probs=84.4
Q ss_pred eEEEEEeecCCceEEEEEEcCCCCCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEEEecCccceEEEeecceeeEE
Q 018667 24 AFVLKLKLQIDMSTVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIK 103 (352)
Q Consensus 24 ~~~~~~k~~~~m~~~~I~fd~~~~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ws~~s~g~~e~~~~~~~~~~ 103 (352)
+..++.-+... +.|++.=+...|.+||.|.|+|.+... .++.+++.+.+.-...+.-.. ..+.... .
T Consensus 165 pIk~Evgi~~c---l~Ie~~~~ks~y~lgd~I~G~I~f~~s-~i~Ik~iel~LiR~Et~~~~~-------~~~~e~~--~ 231 (340)
T 2r51_A 165 SIKMEVGIEDC---LHIEFEYNKSKYHLKDVIVGKIYFLLV-RIKIKHMEIDIIKRETTGTGP-------NVYHEND--T 231 (340)
T ss_dssp CEEEEEEETTT---EEEEEEESCSEEETTCEEEEEEEEEEE-CSCEEEEEEEEEEEEEEEETT-------EEEEEEE--E
T ss_pred CEeccccCCce---EEEEEEECcccccCCCeEEEEEEEEEe-eceeEEEEEEEEEEEEEecCC-------CeeEEEE--E
Confidence 44444444443 555555455689999999999998733 367777787776664332110 0100000 1
Q ss_pred EEeeeEEeeCCeeeCCCceEEeeEEEcCCCCCccccccccceE--EeeEEEEEEEEEEEEecccCCCcceEEEEEEEEc
Q 018667 104 ILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFH--GADINIQYLVTVDIMRGYLHKSLSATVEFIVETD 180 (352)
Q Consensus 104 ~~~~~~~l~~~G~L~~G~~~fpF~F~Lp~~~~~~~~~l~eSy~--G~~g~IrY~vkv~I~Rp~~~~d~~~~~eF~V~~~ 180 (352)
+. ..++ -+|.--.|.. +||.+.||.. .+++||. ....+|+|+|.+.+.-.-. ..+.+..++++...
T Consensus 232 -i~-k~eI-mdG~p~rge~-IPirl~Lp~~------~l~PT~~~~~~~fsV~Y~Lnlvl~~e~~-~~~~kq~pI~L~R~ 299 (340)
T 2r51_A 232 -IA-KYEI-MDGAPVRGES-IPIRLFLAGY------ELTPTMRDINKKFSVRYYLNLVLIDEEE-RRYFKQQEVVLWRK 299 (340)
T ss_dssp -EE-EEEE-EESCCCTTCE-EEEEEEGGGS------CCCCCEEEETTTEEEEEEEEEEEEETTC-CEEEEEEEEEEECC
T ss_pred -EE-EEEE-ecCCccCCCE-EEEEEECCCC------CCCCCccccCCeEEEEEEEEEEEEeCCC-cEEEEEeeEEEEEC
Confidence 11 1122 1454456665 9999999853 4889999 7789999999999965554 35778888888764
No 8
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=97.05 E-value=0.012 Score=58.15 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=83.7
Q ss_pred ecCCceEEEEEEcCCCCCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEEEecCccceEEEeecceeeEEEEeeeEE
Q 018667 31 LQIDMSTVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQE 110 (352)
Q Consensus 31 ~~~~m~~~~I~fd~~~~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ws~~s~g~~e~~~~~~~~~~~~~~~~~ 110 (352)
+..+.-.+.+.+|+. .|.|||.|.-.|.|++......++|++.+...+++. +|.+.+....+ ..
T Consensus 192 ~~sG~l~l~~sldk~--~Y~pGE~I~v~v~I~N~S~k~Vk~Ikv~L~Q~~~~~-----------~~s~~~~k~~V---a~ 255 (393)
T 1g4m_A 192 MSDKPLHLEASLDKE--IYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADIC-----------LFNTAQYKCPV---AM 255 (393)
T ss_dssp SSSSCEEEEEEESCS--EEETTCCEEEEEEEEECSSCCEEEEEEEEEEEEEEC-----------SSBCEEEEEEE---EE
T ss_pred EcCCCEEEEEEECCc--eEcCCCEEEEEEEEEcCCCCEEeEEEEEEEEEEEEE-----------EecCCceEEEE---EE
Confidence 344444677777665 899999999999999888899999999999986442 12221111101 11
Q ss_pred eeCCeeeCCCceEEeeEEEcCCCCCcccc------------ccccceEE-eeEE-----------EEEEEEEEEEeccc-
Q 018667 111 IRTSGRIGSGTTEVPFSMNLKQHGEENLE------------RFYETFHG-ADIN-----------IQYLVTVDIMRGYL- 165 (352)
Q Consensus 111 l~~~G~L~~G~~~fpF~F~Lp~~~~~~~~------------~l~eSy~G-~~g~-----------IrY~vkv~I~Rp~~- 165 (352)
......+++|.+ +.+.|.|++. ++++. ....+... .-.+ |.|.|+|.+.-++.
T Consensus 256 ~e~~~~V~~gs~-~~~~~~L~P~-l~p~~~~~~~aldg~lk~~dt~l~ss~ii~~~~~~~~~gi~VsY~vkV~l~v~~gg 333 (393)
T 1g4m_A 256 EEADDTVAPSST-FCKVYTLTPF-LANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRGG 333 (393)
T ss_dssp EEECCCBCTTEE-EEEEEEECCC-GGGTTTCSSEEESSCTTSTTCCBCCCCCCCTTCCSGGGSEEEEEEEEEEEEECCC-
T ss_pred EecCCcCCCCCE-EeeEEEEcCC-CCCcccccceeeccccccCCcccccceeecCCCCccccceEEEEEEEEEEEecCCC
Confidence 111224667765 7888998543 11100 00012221 2234 99999999998873
Q ss_pred ------CCCcceEEEEEEEEcC
Q 018667 166 ------HKSLSATVEFIVETDK 181 (352)
Q Consensus 166 ------~~d~~~~~eF~V~~~~ 181 (352)
+.++..+.+|++..++
T Consensus 334 ~~~~~~~~~l~~~lPi~i~~p~ 355 (393)
T 1g4m_A 334 LLGDLASSDVAVELPFTLMHPK 355 (393)
T ss_dssp -------CEEEEEEEEEEECCC
T ss_pred cccccccccEEEEeCEEEecCC
Confidence 2489999999997653
No 9
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=96.72 E-value=0.029 Score=55.30 Aligned_cols=132 Identities=15% Similarity=0.200 Sum_probs=84.4
Q ss_pred ecCCceEEEEEEcCCCCCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEEEecCccceEEEeecceeeEEEEeeeEE
Q 018667 31 LQIDMSTVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQE 110 (352)
Q Consensus 31 ~~~~m~~~~I~fd~~~~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ws~~s~g~~e~~~~~~~~~~~~~~~~~ 110 (352)
+..+--.+++.+|+. .|+|||+|.=.|.|++++....+.|++.+.=.+.+.. |........+ ..
T Consensus 189 ~ssGpl~l~vsLdK~--~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l-----------~s~~~~k~~V---a~ 252 (392)
T 1suj_A 189 LSDRPLHLEASLDKE--IYYHGEPINVNVKINNTTGKIVKKIKIIVEQVTDVVL-----------FSLDKYVKTV---CA 252 (392)
T ss_dssp ETTEEEEEEEEESCS--EEETTCCEEEEEEEEECSSSEEEEEEEEEEEEEEECS-----------SSCCEEEEEE---EE
T ss_pred ecCCCEEEEEEeCCc--cccCCCEEEEEEEEECCCCCcEeEEEEEEEEEEEEEE-----------ecCCcEEEEE---EE
Confidence 344433567777665 8999999999999998888899999999998875531 1111111111 12
Q ss_pred eeCCeeeCCCceEEeeEEEcCCCCCccc----------------cccccceEEe--------eEEEEEEEEEEEEecccC
Q 018667 111 IRTSGRIGSGTTEVPFSMNLKQHGEENL----------------ERFYETFHGA--------DINIQYLVTVDIMRGYLH 166 (352)
Q Consensus 111 l~~~G~L~~G~~~fpF~F~Lp~~~~~~~----------------~~l~eSy~G~--------~g~IrY~vkv~I~Rp~~~ 166 (352)
+...+.+.+|.+ +-+.|.|.+. ++++ --|.+|=.+. -..|.|.|+|.+.-++..
T Consensus 253 ~e~~e~V~pgst-~~k~~~L~P~-l~~n~~k~glaldg~lk~~dTnLassti~~~~~~~~~~gI~VsY~vkVkl~v~~gg 330 (392)
T 1suj_A 253 EETNDTVAANST-LSKTFSVTPM-LANNREKRGLALDGKLKHEDTNLASTTVIRPGMDKEVLGILVSYKVKVHLVVARGG 330 (392)
T ss_dssp EECCCCBCTTEE-EEEEEEECCC-GGGCSCCTTCCBSSCTTBSSCCBCCCCCCCTTSCGGGGSEEEEEEEEEEEEEETTS
T ss_pred EecCCCcCCCCE-EEEEEEEecc-ccCCCccceeeecccccCCCccccccccccCCCCccccceEEEEEEEEEEEEcCCc
Confidence 222335677766 8888988743 1110 0122222211 169999999999888732
Q ss_pred -------CCcceEEEEEEEEc
Q 018667 167 -------KSLSATVEFIVETD 180 (352)
Q Consensus 167 -------~d~~~~~eF~V~~~ 180 (352)
.|+..+.+|++..+
T Consensus 331 ~~~~~~s~d~~velPf~L~~p 351 (392)
T 1suj_A 331 ILGDLTSSDVAVELPLTLMHP 351 (392)
T ss_dssp STTCCCCEEEEEEEEEEEECC
T ss_pred ccccccccCeeEEECeEEeCC
Confidence 37899999998655
No 10
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=91.73 E-value=1.1 Score=34.79 Aligned_cols=25 Identities=24% Similarity=0.478 Sum_probs=20.4
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEEe
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIKS 63 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~~ 63 (352)
.+-|..|++ +|+|||+|.=++.+..
T Consensus 3 ~~fi~tDr~--iYrPGetV~~~~~~~~ 27 (102)
T 2p9r_A 3 LVFVQTDKS--IYKPGQTVKFRVVSMD 27 (102)
T ss_dssp EEEEEESCS--EECTTCEEEEEEEEEC
T ss_pred eEEEECCCc--ccCCCCEEEEEEEEEC
Confidence 356777776 9999999999998873
No 11
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=88.98 E-value=8.7 Score=37.48 Aligned_cols=45 Identities=22% Similarity=0.354 Sum_probs=39.1
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEE
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQ 83 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ 83 (352)
.+++.+|+. .|++||+|.=.|.|++.+....+.|++.+.=.+++.
T Consensus 214 ~L~vsLdK~--~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~ 258 (380)
T 3ugu_A 214 RLAVSLSKE--IYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVV 258 (380)
T ss_dssp EEEEEESCS--EEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEEC
T ss_pred EEEEEeCCc--cCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEE
Confidence 566777654 899999999999999999899999999999998765
No 12
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=88.88 E-value=13 Score=38.07 Aligned_cols=25 Identities=20% Similarity=0.353 Sum_probs=20.2
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEEe
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIKS 63 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~~ 63 (352)
.+-|..||+ +|+|||+|.=++.+..
T Consensus 107 ~~fi~TDR~--iYrPGqtV~~r~i~~d 131 (645)
T 2hr0_A 107 YLFIQTDKT--IYTPGSTVLYRIFTVN 131 (645)
T ss_dssp EEEEEESCS--BCCTTSEEEEEEEEEC
T ss_pred cEEEEcCCc--cCCCCCEEEEEEEEEC
Confidence 466677665 9999999999988774
No 13
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=85.39 E-value=14 Score=37.59 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=72.3
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEEeC--CeEEEeEEEEEEEEEEEEEEecCccceEEEeecceeeEEEEeeeEEeeCC
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIKSS--SSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTS 114 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~~~--k~~~h~gI~i~~~G~a~~~ws~~s~g~~e~~~~~~~~~~~~~~~~~l~~~ 114 (352)
.+-|+-||+ +|+|||+|.=++.+... ++... -+.+.+. ...| ..+. .. .+
T Consensus 121 ~vFIqTDr~--iYrPGqtV~~r~i~~d~~~~p~~~-~~~v~i~---------dp~g---------~~v~---~~-~~--- 172 (656)
T 4fxk_A 121 HLFLQTDQP--IYNPGQRVRYRVFALDQKMRPSTD-TITVMVE---------NSHG---------LRVR---KK-EV--- 172 (656)
T ss_dssp EEEEEESCS--EECTTCEEEEEEEEECSSSSBCCC-CEEEEEE---------CTTC---------CEEE---EE-EE---
T ss_pred cEEEECCCC--CcCCCCEEEEEEEEECCccCcCcc-cceEEEE---------CCCC---------cEEe---ee-EE---
Confidence 466777776 99999999988877632 23221 1222211 1111 1111 10 11
Q ss_pred eeeCCCceEEeeEEEcCCCCCccccccccceEEeeEEEEEEEEEEEEecccCCCcceEEEEEEEEcCccccCCCCCCceE
Q 018667 115 GRIGSGTTEVPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMV 194 (352)
Q Consensus 115 G~L~~G~~~fpF~F~Lp~~~~~~~~~l~eSy~G~~g~IrY~vkv~I~Rp~~~~d~~~~~eF~V~~~~~~l~~~~~~p~pv 194 (352)
....|. |.++|+||... + .| .|.|+|..+-.- ....+..|.|+... +...
T Consensus 173 -~~~~G~--~~~~f~Lp~~~-------~---~G-----~w~i~v~~~~~~---~~~~s~~F~Veeyv---------lP~f 222 (656)
T 4fxk_A 173 -YMPSSI--FQDDFVIPDIS-------E---PG-----TWKISARFSDGL---ESNSSTQFEVKKYV---------LPNF 222 (656)
T ss_dssp -CCTTSE--EEEEEECCTTC-------C---SE-----EEEEEEEESSCT---TCCCCEEEEECCCC---------CCSE
T ss_pred -ecCCce--EEEEecCCCCC-------C---Cc-----CEEEEEEEcCCC---ceeEEEEEEEEEEe---------cCcE
Confidence 123453 78999998651 1 15 577877765332 13356889997652 1222
Q ss_pred EEEecccc--cccccCCCccccceEEEEEEeeeEeCCCceEEEEEEEE
Q 018667 195 VFYITQDT--QRHPLLPELKSGGFKVTGKMSTQCSLLDPITGELTVEA 240 (352)
Q Consensus 195 ~f~it~~~--l~~~~~~~~~~~~f~I~~~~~~~~~~~d~i~G~i~~~~ 240 (352)
++.++++. +.... ..... +.+.++-.+..+.|+.|.+++..
T Consensus 223 eV~i~~~~~~~~~~~---~~~~~--~~v~v~a~Y~~G~PV~G~~~v~~ 265 (656)
T 4fxk_A 223 EVKITPGKPYILTVP---GHLDE--MQLDIQARYIYGKPVQGVAYVRF 265 (656)
T ss_dssp EEEEEESSSSCCEET---TEECC--CEEEEEEEETTCCCCCSEEEEEE
T ss_pred EEEEecCcceeeecc---CCCCe--EEEEEEEEEccCccEeeEEEEEE
Confidence 33333211 10000 00111 44556666888899988876653
No 14
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=83.76 E-value=26 Score=39.13 Aligned_cols=26 Identities=8% Similarity=0.478 Sum_probs=20.4
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEEeC
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIKSS 64 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~~~ 64 (352)
.+-|..||+ +|+|||+|.=++.+...
T Consensus 101 ~~fi~TDr~--iYrPGqtV~~r~~~~~~ 126 (1325)
T 2pn5_A 101 SGLIQVDKP--VFKPGDTVNFRVIVLDT 126 (1325)
T ss_dssp EEEEEESCS--EECTTCEEEEEEEEEET
T ss_pred cEEEecCCC--ccCCCCEEEEEEEEecC
Confidence 456666665 99999999999987743
No 15
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=82.16 E-value=27 Score=35.93 Aligned_cols=25 Identities=20% Similarity=0.405 Sum_probs=19.3
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEEe
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIKS 63 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~~ 63 (352)
.+-|.-||+ +|+|||+|.=++.+..
T Consensus 105 ~~fi~TDr~--iYrPGqtV~~r~i~~d 129 (627)
T 3hrz_A 105 FLFIQTDKG--IYTPGSPVLYRVFSMD 129 (627)
T ss_dssp CEEEEESCS--EECTTCEECEEEEESC
T ss_pred cEEEECCCC--ccCCCCEEEEEEEEEC
Confidence 355666665 9999999999887764
No 16
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=76.77 E-value=34 Score=39.47 Aligned_cols=83 Identities=10% Similarity=0.021 Sum_probs=46.1
Q ss_pred EeeEEEcCCCCCccccccccceEEeeEEEEEEEEEEEEecccCCCcceEEEEEEEEcCccccCCCCCCceEEEEeccccc
Q 018667 124 VPFSMNLKQHGEENLERFYETFHGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYITQDTQ 203 (352)
Q Consensus 124 fpF~F~Lp~~~~~~~~~l~eSy~G~~g~IrY~vkv~I~Rp~~~~d~~~~~eF~V~~~~~~l~~~~~~p~pv~f~it~~~l 203 (352)
|.++|+||.. .-.| .|.|+|..+.. . ...+..|.|.... +...++.+++...
T Consensus 182 ~~~~f~L~~~----------~~~G-----~w~I~v~~~~~---~-~~~~~~F~VeeYv---------lP~FeV~v~~~~~ 233 (1642)
T 3prx_B 182 FFWPYNLPDL----------VSLG-----TWRIVAKYEHS---P-ENYTAYFDVRKYV---------LPSFEVRLQPSEK 233 (1642)
T ss_dssp CCCEEECCSS----------CCCE-----EEEEEEEETTE---E-EEEEEEEEECSCC---------CCSEEEEEEESSS
T ss_pred ceEEEEcCCC----------CCce-----eEEEEEEeCCC---C-cEEEEEEEEEEEe---------cCcEEEEEeccce
Confidence 7889999865 1235 57777765421 1 2457899996542 1122333332210
Q ss_pred ccccCCCcc-ccceEEEEEEeeeEeCCCceEEEEEEEE
Q 018667 204 RHPLLPELK-SGGFKVTGKMSTQCSLLDPITGELTVEA 240 (352)
Q Consensus 204 ~~~~~~~~~-~~~f~I~~~~~~~~~~~d~i~G~i~~~~ 240 (352)
-.. .. ... +.+.+|-.+..+.|+.|.+.+.-
T Consensus 234 ~~~----~~~~~~--~~v~V~ArY~yGkPV~G~v~v~f 265 (1642)
T 3prx_B 234 FFY----IDGNEN--FHVSITARYLYGEEVEGVAFVLF 265 (1642)
T ss_dssp EEE----TTSCCC--EEEEEEEEETTSCBCCEEEEEEE
T ss_pred eEE----ecCCCe--EEEEEEEEeCCCCceeeeEEEEE
Confidence 000 00 111 55666767888999999977753
No 17
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=62.23 E-value=59 Score=37.37 Aligned_cols=25 Identities=16% Similarity=0.336 Sum_probs=19.9
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEEe
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIKS 63 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~~ 63 (352)
.+-|..||+ +|+|||+|.=++.+..
T Consensus 128 ~~fiqTDR~--iYrPGqtV~~r~i~~d 152 (1661)
T 2b39_A 128 YLFIQTDKT--IYTPGSTVLYRVFTVD 152 (1661)
T ss_dssp EEEEEESCS--EECTTSEEEEEEEEEC
T ss_pred cEEEecCCC--ccCCCCEEEEEEEEEC
Confidence 466667665 9999999998887774
No 18
>3coo_A Spondin-1; reelin-N domain, cell adhesion, extracellular MAT glycoprotein, secreted; 2.00A {Homo sapiens} PDB: 2zot_A
Probab=59.39 E-value=4.1 Score=35.63 Aligned_cols=60 Identities=8% Similarity=0.132 Sum_probs=35.2
Q ss_pred eeeeeeeEEEE------Eee--cCCceEEEEEEcCCCCCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEE
Q 018667 18 TFVLLRAFVLK------LKL--QIDMSTVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGS 79 (352)
Q Consensus 18 ~~~~~~~~~~~------~k~--~~~m~~~~I~fd~~~~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~ 79 (352)
++|++.+|.|. +.. |++...+.|..+.....|.||+.++-++ ........+|..|.+.-.
T Consensus 11 ~~~~~~aC~m~P~~~~hg~~~~q~~~~py~I~i~~~~~~y~pG~~~~VtL--~g~~~~~F~GFlLqAr~~ 78 (180)
T 3coo_A 11 TLDKVPKSEGYCSRILRAQGTRREGYTEFSLRVEGDPDFYKPGTSYRVTL--SAAPPSYFRGFTLIALRE 78 (180)
T ss_dssp ------CCCCTTTTEEECCCC----CTTEEEEETTCCSEECTTCEEEEEE--EECTTCCBSCCEEEEEET
T ss_pred hccCccCCCCcCCcCcCCCCCCCCCCCCEEEEEcCCCceecCCCcEEEEE--eccCCCceeEEEEEEEcC
Confidence 57899999732 232 4444478999886566899999998444 443445678988887753
No 19
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=58.94 E-value=1.2e+02 Score=34.35 Aligned_cols=24 Identities=25% Similarity=0.491 Sum_probs=18.8
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEE
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIK 62 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~ 62 (352)
.+-|..|++ +|.|||+|.=+|..-
T Consensus 105 ~~fiqTDK~--iY~Pgq~V~~rv~~~ 128 (1451)
T 4acq_A 105 LVFVQTDKS--IYKPGQTVKFRVVSM 128 (1451)
T ss_dssp EEEEEESCS--EECTTCEEEEEEEEE
T ss_pred cEEEECCCC--cCCCCCEEEEEEEEE
Confidence 466666665 999999999888665
No 20
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=52.79 E-value=87 Score=35.97 Aligned_cols=25 Identities=12% Similarity=0.337 Sum_probs=19.5
Q ss_pred EEEEEEcCCCCCcCCCCcEEEEEEEEe
Q 018667 37 TVEIKLSRSNRIYRPSEPLQGKIVIKS 63 (352)
Q Consensus 37 ~~~I~fd~~~~vY~~Ge~VsG~V~i~~ 63 (352)
.+-|..||+ +|+|||+|.=++.+..
T Consensus 125 ~~fiqTDR~--iYrPGqtV~~r~i~~d 149 (1676)
T 3cu7_A 125 FLFIHTDKP--VYTPDQSVKVRVYSLN 149 (1676)
T ss_dssp EEEEEESCS--EECTTCEECEEEEEEC
T ss_pred cEEEECCCC--ccCCCCEEEEEEEEEC
Confidence 466667665 9999999988887663
No 21
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=37.30 E-value=1.6e+02 Score=23.46 Aligned_cols=70 Identities=16% Similarity=0.270 Sum_probs=42.4
Q ss_pred CCCCCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEEEecCccceEEEeecceeeEEEEeeeEEeeCCe-----eeC
Q 018667 44 RSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSG-----RIG 118 (352)
Q Consensus 44 ~~~~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ws~~s~g~~e~~~~~~~~~~~~~~~~~l~~~G-----~L~ 118 (352)
..-++|++|-.+|=.+....+.+ +--|| -+-|. ..++ -...+.+++++...++.-|| .+.
T Consensus 15 kkaNvYFDGkV~S~~~~~~dG~~-kTlGV--m~PGe--Y~F~----------T~~~E~MevvsG~l~V~LpG~~eW~~~~ 79 (106)
T 3eo6_A 15 KSSRISLDGRRSERSVILADGSM-HSLTL--LHPGV--YTLS----------SEVAETIRVLSGMAYYHAEGANDVQELH 79 (106)
T ss_dssp SCCEEETTTTEEEEEEEETTSCE-EEEEE--ECSEE--EEEC----------CSSCEEEEEEEEEEEEECTTCSSCEEEE
T ss_pred EEeeEEeCCeEEEEEEEeCCCCe-EEEEE--EeeeE--EEec----------CCCcEEEEEEEeEEEEECCCCccCEEEC
Confidence 34569999999987777655433 22343 34454 1111 11224467777776665555 578
Q ss_pred CCceEEeeEEEcCCC
Q 018667 119 SGTTEVPFSMNLKQH 133 (352)
Q Consensus 119 ~G~~~fpF~F~Lp~~ 133 (352)
+|.+ |..|++
T Consensus 80 aGes-----F~Vpan 89 (106)
T 3eo6_A 80 AGDS-----MVIPAN 89 (106)
T ss_dssp TTCE-----EEECSS
T ss_pred CCCE-----EEECCC
Confidence 8887 888876
No 22
>2zou_A Spondin-1; beta-sandwich, extracellular protein, cell adhesion, extrace matrix, glycoprotein, secreted; 1.45A {Homo sapiens}
Probab=33.60 E-value=66 Score=26.72 Aligned_cols=46 Identities=9% Similarity=0.281 Sum_probs=31.5
Q ss_pred cCCceEEEEEEcCCCCCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEE
Q 018667 32 QIDMSTVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGS 79 (352)
Q Consensus 32 ~~~m~~~~I~fd~~~~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~ 79 (352)
|.+...+.|..+.....|.||+.++-++ ........+|..|.+.-.
T Consensus 18 ~~~~~py~i~i~~~~~~y~pG~~~~VtL--~~~~~~~F~GFllqAr~~ 63 (149)
T 2zou_A 18 REGYTEFSLRVEGDPDFYKPGTSYRVTL--SAAPPSYFRGFTLIALRE 63 (149)
T ss_dssp CCSCCSEEEEETTCCSSBCTTCEEEEEE--EECTTCCBSEEEEEEEET
T ss_pred CCCCCCEEEEEecCCceEcCCCcEEEEE--eccCCCceEEEEEEEEec
Confidence 4445568888866556899999987444 433334678888887643
No 23
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=26.44 E-value=54 Score=28.07 Aligned_cols=42 Identities=17% Similarity=0.364 Sum_probs=25.8
Q ss_pred eeeCCCceEEeeEEEcCCCCCcccccccc--------------ceEE-eeEEEEEEEEEEEE
Q 018667 115 GRIGSGTTEVPFSMNLKQHGEENLERFYE--------------TFHG-ADINIQYLVTVDIM 161 (352)
Q Consensus 115 G~L~~G~~~fpF~F~Lp~~~~~~~~~l~e--------------Sy~G-~~g~IrY~vkv~I~ 161 (352)
|-++.|+|+|-|+-.-| ...++|. ||.| .+.+|-|+|..+..
T Consensus 63 GPi~~G~~kFv~~adpP-----d~~~IP~~~dilGvTvillt~sY~~qEFiRVGYYVnneY~ 119 (161)
T 2cu9_A 63 GPIPIGINKFVFEADPP-----NIDLLPQLSDVLGVTVILLSCAYEDNEFVRVGYYVNNEME 119 (161)
T ss_dssp CSCCSEEEEEEEEECCC-----CGGGSSCGGGGSEEEEEEEEEEETTEEEEEEEEEEEEEET
T ss_pred CCccceEEEEEEEcCCC-----ChhHCCCcccceeeEEEEEEEEECCeEEEEEEEEEeceeC
Confidence 45789998766666644 4567776 4544 34566666655543
No 24
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=22.40 E-value=1.9e+02 Score=22.36 Aligned_cols=66 Identities=9% Similarity=0.128 Sum_probs=37.1
Q ss_pred CCcCCCCcEEEEEEEEeCCeEEEeEEEEEEEEEEEEEEecCccceEEEeecceeeEEEEeeeEEeeCCe-----eeCCCc
Q 018667 47 RIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSG-----RIGSGT 121 (352)
Q Consensus 47 ~vY~~Ge~VsG~V~i~~~k~~~h~gI~i~~~G~a~~~ws~~s~g~~e~~~~~~~~~~~~~~~~~l~~~G-----~L~~G~ 121 (352)
++|++|-.+|=.+... +.+ + .+=|-+-|. |+ --....+.+++++....+.-+| .+.+|.
T Consensus 6 NvYFdGkv~S~~~~~~-G~~-~--TvGVm~pGe----yt--------F~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGe 69 (94)
T 2oyz_A 6 NSYFAGGVKSLGFNQH-GQD-V--SVGVMLPGE----YT--------FGTQAPERMTVVKGALVVKRVGEADWTTYSSGE 69 (94)
T ss_dssp EEEGGGTEEEEEEEET-TEE-E--EEEEECSEE----EE--------EEESSCEEEEEEESEEEEEETTCSSCEEEETTC
T ss_pred eEEeCCeEEEEEEEeC-CCC-E--EEEEEeceE----EE--------EcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCC
Confidence 4789998888777655 332 2 333344454 11 1111224466777666554444 577887
Q ss_pred eEEeeEEEcCCC
Q 018667 122 TEVPFSMNLKQH 133 (352)
Q Consensus 122 ~~fpF~F~Lp~~ 133 (352)
+ |.+|++
T Consensus 70 s-----F~Vpan 76 (94)
T 2oyz_A 70 S-----FDVEGN 76 (94)
T ss_dssp E-----EEECSS
T ss_pred E-----EEECCC
Confidence 6 777765
Done!